Citrus Sinensis ID: 024902

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Protein Sequence
MEKMEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHccccHHHHHHHHHccHHHHHHHHHccccccEEEEccccHHHHcccccHHHHccHHHHHHHHHHccccccccHHHHHHccccccEEEcccccEEEEEEEcccEEEEcccccEEEEEEEcccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHccHHHHHHHHHccccccEEEEEcccHHHHHccccccccccHHHHHHHHHHHcccccccHHHcccccccccccccccccEEEEEEccccEEEEEccEEEEEEEEEEEccccEEEEEEccEEccHHHcccccccccccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MEKMEVSMALMISALLLLFSSanaqkaaspptfsptpapapapehvnltdllsvagpfhTFLNYLESTKVLETFQnqanntdegitifvpkddafkslkkpslanLTQDQLKQLCLfhalphyysfadfknlsqmspvstyaggdyklnftdvsgavhidsgwsrtkvsssvhstdpvalyqvdkvllpeaifgtdippmpapapapdvappadapsevsdggaaspksspgtnsshrninWGICSQLILAVSGLMVLFL
Flexible Loop (DISEMBL)
MEKMEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKsspgtnsshrnINWGICSQLILAVSGLMVLFL
Low Complexity Region (SEG)
MEKMEVsmalmisallllfssanaQKaaspptfsptpapapapEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIppmpapapapdvappadapSEVSDGGAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL
Disordered region (IsUnstruct)
**********************************************NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGT*******************************************NINWGICSQLILAVSGLMVLF*
Disordered Region (DISOPRED)
***********ISALLLLFSSA*************************LTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLS**SP**TYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPE**************************************************NWGICSQLILAVSGLMVLFL
Disordered Region (DISEMBL)
MEKMEVSMALMISALLLLFSSAN***************PAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSG***********STDPVALYQVDKVLLPEAIFGTDIPPMPAPAPA*****************************SHRNINWGICSQLILAVSGLMVLFL
Disordered Region (DISPRO)
**KMEVSMALMISALLLLFSSANAQKAASPPTFSPT******PEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGT*******************************************NINWGICSQLILAVSGLMVLFL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKMEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	260	2.2.26 [Sep-21-2011]
Q9SJ81	254	Fasciclin-like arabinogal	yes	no	0.969	0.992	0.625	3e-75
Q9SIL7	247	Fasciclin-like arabinogal	no	no	0.738	0.777	0.390	1e-27
Q9ZWA8	247	Fasciclin-like arabinogal	no	no	0.776	0.817	0.351	3e-27
Q8LEJ6	246	Fasciclin-like arabinogal	no	no	0.657	0.695	0.391	2e-26
Q9FFH6	247	Fasciclin-like arabinogal	no	no	0.719	0.757	0.351	4e-26
Q8LEE9	249	Fasciclin-like arabinogal	no	no	0.557	0.582	0.430	6e-26
Q9LZX4	422	Fasciclin-like arabinogal	no	no	0.684	0.421	0.372	4e-22
O22126	420	Fasciclin-like arabinogal	no	no	0.588	0.364	0.348	4e-18
Q9SNC3	420	Fasciclin-like arabinogal	no	no	0.630	0.390	0.320	4e-14
Q9SU13	403	Fasciclin-like arabinogal	no	no	0.730	0.471	0.283	4e-09

>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1

 Score =  281 bits (720), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 164/262 (62%), Positives = 201/262 (76%), Gaps = 10/262 (3%)

Query: 1   MEKMEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAP-EHVNLTDLLSVAGPFH 59
           M KM++S+ + + AL++   SA+A+ A+ P    P         E+VNLT+LLSVAGPFH
Sbjct: 1   MAKMQLSIFIAVVALIV--CSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFH 58

Query: 60  TFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHA 119
           TFL+YL ST V+ETFQNQANNT+EGITIFVPKDDAFK+ K P L+NLT+DQLKQL LFHA
Sbjct: 59  TFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHA 118

Query: 120 LPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVA 179
           LPHYYS ++FKNLSQ  PVST+AGG Y L FTDVSG V IDS W+RTKVSSSV STDPVA
Sbjct: 119 LPHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVA 178

Query: 180 LYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNSSHRN 239
           +YQV++VLLPEAIFGTD+PPMPAPAPAP V+ P+D+PS     GA+SPK      SSH+N
Sbjct: 179 VYQVNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADSEGASSPK------SSHKN 232

Query: 240 INWG-ICSQLILAVSGLMVLFL 260
                + + + + +SGL+ LFL
Sbjct: 233 SGQKLLLAPISMVISGLVALFL 254

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2

 Score =  123 bits (309), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 115/210 (54%), Gaps = 18/210 (8%)

Query: 4   MEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEH--VNLTDLLSVAGPFHTF 61
           M  S+   +  L+ LF+    Q   S PT     APAP  E   +NLT +L     F T 
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQ---SQPT-----APAPTTEKSPINLTAILEAGHQFTTL 52

Query: 62  LNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALP 121
           +  L +T+V      Q N++D+G+TIF P D+AF  LK  +L +LT  Q  QL L+H +P
Sbjct: 53  IQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIP 112

Query: 122 HYYSFADFKNLSQMSPVSTYA----GGDYKLNFTD--VSGAVHIDSGWSRTKVSSSVHST 175
            YYS +D   L   +PV T A    GG + LNFT    S  V++ +G   T++++++   
Sbjct: 113 KYYSLSDL--LLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQ 170

Query: 176 DPVALYQVDKVLLPEAIFGTDIPPMPAPAP 205
            P+A+Y VD VLLPE +FGT   P  APAP
Sbjct: 171 FPLAVYVVDSVLLPEELFGTKTTPTGAPAP 200

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 17/219 (7%)

Query: 46  VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
           +NLT +L   G F TF++ L  T+V      Q N++ EG+T+F P D+AF++LK  +L  
Sbjct: 38  INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97

Query: 106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGD----YKLNFTDVSGAVHIDS 161
           L+ D   +L L+H  P YYS  D   LS  +PV T A G     Y LNFT  +  +++ +
Sbjct: 98  LSPDDQVKLILYHVSPKYYSMDDL--LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVST 155

Query: 162 GWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSD 221
           G+  T++S+S+    P+A+Y VD VLLP  +FG       APAP        D       
Sbjct: 156 GYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKK 215

Query: 222 GGAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL 260
             AASP    G+      + +G+         GL+VL L
Sbjct: 216 --AASPSDKSGSGEKKVGLGFGL---------GLIVLCL 243

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 8/179 (4%)

Query: 38  APAPAPEH-VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTD-EGITIFVPKDDAF 95
           APAP P    N+T +L  AG F  F+  L+ST+  +    Q N++   G+T+F P D+AF
Sbjct: 26  APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAF 85

Query: 96  KSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG----GDYKLNFT 151
            SLK  +L +L+  Q  QL  FH LP   +   F+ +S  +P+ T AG    G + LN T
Sbjct: 86  NSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNIT 143

Query: 152 DVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVA 210
                V+I +G     V++SV+S   +A+YQVD+VLLP A+FG+ + P PAP     V+
Sbjct: 144 SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVS 202

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 15/202 (7%)

Query: 46  VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
           +N+T +L   G F T +  L +T++      Q N++ EG+T+  P D+AF++LK  +L  
Sbjct: 35  INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNK 94

Query: 106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYA-----GGDYKLNFTDVSGAVHID 160
           L+ D   +L L+H  P +Y+  D   LS  +PV T A     GG Y LNFT     V++ 
Sbjct: 95  LSPDDQVKLILYHVSPKFYTLEDL--LSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVS 152

Query: 161 SGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG-TDIPPM--PAPAPAPDVAPPADAPS 217
           +G   T++S+S+    P+A+Y VD VLLPE +FG   I PM  P  + +PDV+  +++  
Sbjct: 153 TGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSDDSESSK 212

Query: 218 EVSDGGAASPKSSPGTNSSHRN 239
           +     AA+P  S  + S   N
Sbjct: 213 K-----AAAPSESEKSGSGEMN 229

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2

 Score =  117 bits (294), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 6/151 (3%)

Query: 47  NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
           N+T +L  AG F  F+  L+ST V      Q NN+D GITIF P D +F  LK  +L +L
Sbjct: 39  NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98

Query: 107 TQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG----GDYKLNFTDVSGAVHIDSG 162
           T +Q  +L  FH +P Y S ++F+ +S  +P+ T AG    G + LN T     V+I SG
Sbjct: 99  TDEQQVELIQFHVIPSYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSG 156

Query: 163 WSRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
            + T VS +V+S   +A+YQVDKVLLP+ +F
Sbjct: 157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1

 Score =  105 bits (261), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 7/185 (3%)

Query: 38  APAPAPEHV-NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFK 96
           APAP+   V N+T LL  AG   TF N L S+ V++TF++     ++G+T+F P D+AFK
Sbjct: 180 APAPSSAGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTV---EKGLTVFAPSDEAFK 235

Query: 97  SLKKPSLANLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSG 155
           +   P L NLTQ ++  L  +HAL  Y      K N   +S ++T   G Y L  +    
Sbjct: 236 ARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGD 295

Query: 156 AVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAP-PAD 214
            V + +G   ++++ +V    PV ++ VD VLLP  +FG    P PAP P     P PA 
Sbjct: 296 EVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKSSSPAPAPEPVSAPTPTPAK 355

Query: 215 APSEV 219
           +PS V
Sbjct: 356 SPSPV 360

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 5/158 (3%)

Query: 38  APAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKS 97
           APAP+    N+T LL  AG   TF N L S+ VL+T+++     ++G+T+F P D+AFK+
Sbjct: 180 APAPSASLSNITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAFKA 235

Query: 98  LKKPSLANLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSGA 156
              P L  LTQ ++  L  +HAL  Y      K N + +S ++T   G + L  +     
Sbjct: 236 EGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDE 295

Query: 157 VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG 194
           V + +G + ++++ +V    PV ++ VD VLLP  +FG
Sbjct: 296 VILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFG 333

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 14/178 (7%)

Query: 24  AQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDE 83
           A +  +PP  S + +P PA   +NLT +L     F+  L+ L ++ V+  F+N  +    
Sbjct: 186 ASETLTPPPTSTSLSPPPA--GINLTQILINGHNFNVALSLLVASGVITEFEN--DERGA 241

Query: 84  GITIFVPKDDAFKSL-KKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPV---- 138
           GIT+FVP D AF  L    +L +L  +Q   +  FH L  YY+    ++++   PV    
Sbjct: 242 GITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITN--PVQPTL 299

Query: 139 --STYAGGDYKLNFTDVSGA-VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
                  G Y LN + V+G+ V I+SG     V+ +    +PV+++ V KVLLP+ +F
Sbjct: 300 ATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357

May be a cell surface adhesion protein that is required for normal cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 25/215 (11%)

Query: 38  APAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKS 97
           AP  +P  + LT +L   G    F + L+ST   +TFQ+     D G+T+F P D A   
Sbjct: 181 APTASPSDLILTTILEKQGC-KAFSDILKSTGADKTFQD---TVDGGLTVFCPSDSAVGK 236

Query: 98  LKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGA 156
              P   +L+      L L+H +P Y S    +  S    V+T A  G+ K +FT  +  
Sbjct: 237 FM-PKFKSLSPANKTALVLYHGMPVYQSLQMLR--SGNGAVNTLATEGNNKFDFTVQNDG 293

Query: 157 --VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG-------------TDIPPMP 201
             V +++     KV  ++   +P+ +Y++DKVLLP  I+                     
Sbjct: 294 EDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTSAPAPKSSKKKPKNAE 353

Query: 202 APAPAPDVAPPADAPSEVSD--GGAASPKSSPGTN 234
           A A  P    P+D   EV+D   GA S   +  +N
Sbjct: 354 ADADGPSADAPSDDDVEVADDKNGAVSAMITRTSN 388

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
255583032	263	conserved hypothetical protein [Ricinus	0.984	0.973	0.723	3e-88
118483679	262	unknown [Populus trichocarpa]	0.984	0.977	0.714	2e-84
225446995	254	PREDICTED: fasciclin-like arabinogalacta	0.957	0.980	0.725	1e-83
224064866	263	fasciclin-like arabinogalactan protein 1	0.984	0.973	0.712	2e-83
47717927	262	fasciclin-like AGP 12 [Populus tremula x	0.980	0.973	0.723	5e-82
351724695	256	uncharacterized protein LOC100499686 pre	0.980	0.996	0.696	4e-80
157273638	265	fasciclin-like arabinogalactan protein 2	0.988	0.969	0.679	1e-79
359806547	256	uncharacterized protein LOC100801468 pre	0.980	0.996	0.688	4e-77
357495457	262	Fasciclin-like arabinogalactan protein [	0.834	0.828	0.674	1e-75
224131760	206	fasciclin-like arabinogalactan protein 1	0.657	0.830	0.848	4e-74

>gi|255583032|ref|XP_002532284.1| conserved hypothetical protein [Ricinus communis] gi|223528018|gb|EEF30099.1| conserved hypothetical protein [Ricinus communis]

 Score =  330 bits (847), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 191/264 (72%), Positives = 219/264 (82%), Gaps = 8/264 (3%)

Query: 4   MEVSMALMISA-LLLLFSSANAQKAASPPTFSPTPAPAPAPE----HVNLTDLLSVAGPF 58
           ME+SM  M S+ LL LF+S    +AASPP+    P PAPAP     +VNLTDLLSVAGPF
Sbjct: 1   MELSMIFMFSSTLLFLFTSTAYVQAASPPSAILPPTPAPAPAPIPPYVNLTDLLSVAGPF 60

Query: 59  HTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFH 118
           HTFL+YL STK ++TFQNQANNTDEGITIFVPKD AF SLKKPSL NLTQDQLKQL LFH
Sbjct: 61  HTFLSYLVSTKAIDTFQNQANNTDEGITIFVPKDGAFSSLKKPSLTNLTQDQLKQLVLFH 120

Query: 119 ALPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDP 177
           ALPHYYS A+FKNLSQ+SPVST+AG G+Y LNFTDVSG VH+DSGW++TKVSSSVHSTDP
Sbjct: 121 ALPHYYSLAEFKNLSQLSPVSTFAGAGEYALNFTDVSGTVHLDSGWTKTKVSSSVHSTDP 180

Query: 178 VALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAP-SEVSDGGAASPKSSPGTNSS 236
           VA+YQVDKVLLPEAIFGTDIPP PAPAPAP+++P AD+P SEV+     +P  +P  NSS
Sbjct: 181 VAIYQVDKVLLPEAIFGTDIPPTPAPAPAPEISPVADSPSSEVTADKGHAPGVAP-PNSS 239

Query: 237 HRNINWGICSQLILAVSGLMVLFL 260
           +R  N GI SQL+LAVSG++VLFL
Sbjct: 240 YRISNMGIWSQLVLAVSGVLVLFL 263

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483679|gb|ABK93733.1| unknown [Populus trichocarpa]

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/263 (71%), Positives = 220/263 (83%), Gaps = 7/263 (2%)

Query: 4   MEVSMALMISALLLLFSS--ANAQKA--ASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFH 59
           M+ SM +++S+ LL   +  A AQK      PT +P+PAPAP+P +VNLTDLLSVAGPFH
Sbjct: 1   MKFSMIIVLSSTLLFSCTPLAYAQKVASPPAPTPTPSPAPAPSPPYVNLTDLLSVAGPFH 60

Query: 60  TFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHA 119
            FLNYLESTKV++TFQNQANNTDEGITIFVPKDDAFK+LKK SL+NLTQDQLKQL LFHA
Sbjct: 61  NFLNYLESTKVIDTFQNQANNTDEGITIFVPKDDAFKNLKKASLSNLTQDQLKQLILFHA 120

Query: 120 LPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPV 178
           LPHYYS +DFKNLSQ+SPVST+AG G Y LNFTD SG VH+DSGWS+TKVSSSVHSTDPV
Sbjct: 121 LPHYYSLSDFKNLSQVSPVSTFAGAGGYALNFTDTSGTVHLDSGWSKTKVSSSVHSTDPV 180

Query: 179 ALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAP-SEVSDGGAASPKSSPGTNSSH 237
           A+YQVDKVLLPEAIFGT+IPP PAPAPAPD +P AD+P S+ S G  ++P  SP  NSS+
Sbjct: 181 AIYQVDKVLLPEAIFGTNIPPTPAPAPAPDTSPTADSPTSDDSAGAGSAPGKSP-PNSSY 239

Query: 238 RNINWGICSQLILAVSGLMVLFL 260
           R    GI SQL+LA++G++VLFL
Sbjct: 240 RINGVGIWSQLVLAIAGVLVLFL 262

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446995|ref|XP_002266937.1| PREDICTED: fasciclin-like arabinogalactan protein 7 isoform 2 [Vitis vinifera] gi|225446997|ref|XP_002266986.1| PREDICTED: fasciclin-like arabinogalactan protein 7 isoform 3 [Vitis vinifera] gi|225446999|ref|XP_002266893.1| PREDICTED: fasciclin-like arabinogalactan protein 7 isoform 1 [Vitis vinifera] gi|147823112|emb|CAN73020.1| hypothetical protein VITISV_004046 [Vitis vinifera]

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/251 (72%), Positives = 214/251 (85%), Gaps = 2/251 (0%)

Query: 10  LMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTK 69
           ++I AL+L  SS+   +    P+ SP+PAPAPAP +VNLTDLLSVAGPFHTFLNYL STK
Sbjct: 6   MVICALVLFCSSSAYAQMVGSPSLSPSPAPAPAPPYVNLTDLLSVAGPFHTFLNYLVSTK 65

Query: 70  VLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADF 129
           V+ETFQ+QAN+T+EGITIFVPKDDAFKSLKKPSL+NLT+DQLK L LFHAL HYYS ADF
Sbjct: 66  VIETFQHQANDTEEGITIFVPKDDAFKSLKKPSLSNLTEDQLKSLLLFHALAHYYSLADF 125

Query: 130 KNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLP 189
           KNLSQ+SPVST+AGG Y LNFTDVSG VHI SGW+ TKVSSSVHSTDPVA+YQVDKVLLP
Sbjct: 126 KNLSQLSPVSTFAGGQYTLNFTDVSGTVHIGSGWTNTKVSSSVHSTDPVAVYQVDKVLLP 185

Query: 190 EAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNSSHRNINWGICSQLI 249
           EAIFGTDIPP PAPAPAPD++P ADAP+   + G  SP++S   +SS+R I+ G+ SQ++
Sbjct: 186 EAIFGTDIPPTPAPAPAPDISPAADAPTASDEAG--SPRASSTPSSSYRIISLGVWSQMV 243

Query: 250 LAVSGLMVLFL 260
           LA+SG +VLFL
Sbjct: 244 LAISGGLVLFL 254

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064866|ref|XP_002301590.1| fasciclin-like arabinogalactan protein 12.2 [Populus trichocarpa] gi|222843316|gb|EEE80863.1| fasciclin-like arabinogalactan protein 12.2 [Populus trichocarpa]

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/264 (71%), Positives = 219/264 (82%), Gaps = 8/264 (3%)

Query: 4   MEVSMALMISALLLLFSS--ANAQKAASPPTFSPTPAPAPAPE----HVNLTDLLSVAGP 57
           ME SM +M S+ LL   +  A AQ AASPP  +PTP+ +PAP     +V+LTDLLSVAGP
Sbjct: 1   MEFSMIIMFSSTLLFLCTPVAYAQTAASPPAPTPTPSSSPAPAPTPPYVSLTDLLSVAGP 60

Query: 58  FHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLF 117
           FHTFL+YLESTKV++TFQNQANNTDEGITIFVPKDDAFK+LKKPSL+NLTQDQ+KQL LF
Sbjct: 61  FHTFLSYLESTKVVDTFQNQANNTDEGITIFVPKDDAFKNLKKPSLSNLTQDQVKQLILF 120

Query: 118 HALPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTD 176
           HALPHYY+ ADFKNLSQ+SPVST+AG G Y LNFTDVSG VH+DSGWS+TKVSSSVHSTD
Sbjct: 121 HALPHYYALADFKNLSQVSPVSTFAGAGGYALNFTDVSGTVHLDSGWSKTKVSSSVHSTD 180

Query: 177 PVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNSS 236
           PVA+YQVDKVLLPEAIFG DIPP PAPAPAP+ +  AD+PS  S G  ++P +SP  NSS
Sbjct: 181 PVAVYQVDKVLLPEAIFGADIPPAPAPAPAPETSLAADSPSSDSTGDGSAPGTSP-PNSS 239

Query: 237 HRNINWGICSQLILAVSGLMVLFL 260
           +R     I SQL+LA+ G++VLFL
Sbjct: 240 YRIFGVDIWSQLVLALIGVLVLFL 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47717927|gb|AAT37955.1| fasciclin-like AGP 12 [Populus tremula x Populus alba]

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 191/264 (72%), Positives = 219/264 (82%), Gaps = 9/264 (3%)

Query: 4   MEVSMALMISALLLLFSS--ANAQKAASPPTFSPTPAPAPAPE--HVNLTDLLSVAGPFH 59
           ME SM +++ + LL   +  A AQK ASPP  +PTP+PAPAP   +VNLTDLLSVAGPF 
Sbjct: 1   MEFSMIIVLCSTLLFSCTPLAYAQKVASPPAPTPTPSPAPAPSPPYVNLTDLLSVAGPFQ 60

Query: 60  TFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHA 119
            FLNYLESTKV++TFQNQANNTDEGITIFVPKDDAFK+LKKPSL+NLTQDQLKQL LFHA
Sbjct: 61  NFLNYLESTKVIDTFQNQANNTDEGITIFVPKDDAFKNLKKPSLSNLTQDQLKQLILFHA 120

Query: 120 LPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPV 178
           LPHYYS +DFKNLSQ+SPVST+AG G Y LNFTD SG V +DSGWS+TKVSSSVHSTDPV
Sbjct: 121 LPHYYSLSDFKNLSQVSPVSTFAGAGRYALNFTDTSGTVQLDSGWSKTKVSSSVHSTDPV 180

Query: 179 ALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVSDGGAASP--KSSPGTNSS 236
           A+YQVDKVLLPEAIFGTDIPP PAPAPAPD +P AD+P+     GA S   KS+P  NSS
Sbjct: 181 AVYQVDKVLLPEAIFGTDIPPTPAPAPAPDTSPAADSPTSDDSAGAGSAPGKSTP--NSS 238

Query: 237 HRNINWGICSQLILAVSGLMVLFL 260
           +R    GI SQL+LA++G++VLFL
Sbjct: 239 YRINGVGIWSQLVLAIAGVLVLFL 262

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724695|ref|NP_001238346.1| uncharacterized protein LOC100499686 precursor [Glycine max] gi|255625789|gb|ACU13239.1| unknown [Glycine max]

 Score =  303 bits (777), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 179/257 (69%), Positives = 216/257 (84%), Gaps = 2/257 (0%)

Query: 4   MEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLN 63
           ME SM  ++S ++LLFSSA A K ASPP+ SPTPAPAPAP+ VNLT+LLSVAGPFHTFL 
Sbjct: 1   MEFSMIFIVSNIMLLFSSAFA-KTASPPSLSPTPAPAPAPDFVNLTELLSVAGPFHTFLG 59

Query: 64  YLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHY 123
           YLESTKV++TFQNQANNT+EGITIFVPKD AF ++KK +L+NLT +QLKQ+ LFHALPH+
Sbjct: 60  YLESTKVIDTFQNQANNTEEGITIFVPKDSAFNAIKKTTLSNLTSNQLKQVILFHALPHF 119

Query: 124 YSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQV 183
           YS A+F +LSQ S   T+AGGDY LNFTD SG VHI+SGWS+T+VSS+VHSTDPVA+YQV
Sbjct: 120 YSLAEFTSLSQTSSTPTFAGGDYTLNFTDDSGTVHINSGWSKTRVSSAVHSTDPVAIYQV 179

Query: 184 DKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVS-DGGAASPKSSPGTNSSHRNINW 242
           DKVLLPEAIFGTDIPP PAPAP PD+AP AD+P+E S D  A SP S+   +SSH+ I++
Sbjct: 180 DKVLLPEAIFGTDIPPAPAPAPTPDIAPAADSPTEHSADSKAPSPSSTHDGSSSHKLISY 239

Query: 243 GICSQLILAVSGLMVLF 259
           GI + L+LA  G++VLF
Sbjct: 240 GIWANLVLATFGVLVLF 256

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157273638|gb|ABV27473.1| fasciclin-like arabinogalactan protein 2 [Gossypium hirsutum]

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/265 (67%), Positives = 207/265 (78%), Gaps = 8/265 (3%)

Query: 4   MEVSMALMISALLLLFSSANAQKAASPP-------TFSPTPAPAPAPEHVNLTDLLSVAG 56
           ME S   MIS    L  S+ A  A+SPP       + +PTPAPAPAPE+VNLT LLSVAG
Sbjct: 1   MEFSRVSMISCFAFLLCSSLAYGASSPPAPMAMSPSPTPTPAPAPAPEYVNLTYLLSVAG 60

Query: 57  PFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCL 116
           PFHTFLNYLESTKVL+TFQNQANNTD+GITIFVPKD AFK+LKKPSL+NLT DQLK L L
Sbjct: 61  PFHTFLNYLESTKVLDTFQNQANNTDQGITIFVPKDSAFKALKKPSLSNLTNDQLKSLIL 120

Query: 117 FHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTD 176
           FHA+P +YS ADF  LS   PVST AG  Y LNFTD SG VH+DSGWS+TKVSS+VHSTD
Sbjct: 121 FHAMPKFYSLADFNKLSTKGPVSTLAGSQYSLNFTDNSGTVHLDSGWSKTKVSSAVHSTD 180

Query: 177 PVALYQVDKVLLPEAIFGTDI-PPMPAPAPAPDVAPPADAPSEVSDGGAASPKSSPGTNS 235
           PVA+YQVDKVLLPEAIFGTDI P  PAPAPAPD++P ADAPS  + G  +S K+ P T+S
Sbjct: 181 PVAIYQVDKVLLPEAIFGTDIPPMPPAPAPAPDISPAADAPSAETKGKGSSSKAEPSTSS 240

Query: 236 SHRNINWGICSQLILAVSGLMVLFL 260
           SHR +N+G  +QL+LA+ G  V+F 
Sbjct: 241 SHRIMNFGTWNQLVLALFGGWVMFF 265

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806547|ref|NP_001241262.1| uncharacterized protein LOC100801468 precursor [Glycine max] gi|255647196|gb|ACU24066.1| unknown [Glycine max]

 Score =  293 bits (751), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 177/257 (68%), Positives = 214/257 (83%), Gaps = 2/257 (0%)

Query: 4   MEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLN 63
           M  SM  ++S ++LLFSSA A K ASPP+ SPTPAPAPAP++VNLT+LLSVAGPFHTFL 
Sbjct: 1   MAFSMVFIVSNIMLLFSSAFA-KTASPPSLSPTPAPAPAPDYVNLTELLSVAGPFHTFLG 59

Query: 64  YLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHY 123
           YLESTKV++TFQNQANNT+EGITIFVPKD AF ++KK  L+NLT DQLKQ+ LFHALPH+
Sbjct: 60  YLESTKVIDTFQNQANNTEEGITIFVPKDSAFNAVKKTVLSNLTSDQLKQVILFHALPHF 119

Query: 124 YSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQV 183
           YS A+F +LSQ S   T+AGGDY LNFTD SG VHI SGWS+TKVSS+VH+TDPVA+YQV
Sbjct: 120 YSLAEFTSLSQTSSTPTFAGGDYTLNFTDDSGTVHISSGWSKTKVSSAVHATDPVAIYQV 179

Query: 184 DKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSEVS-DGGAASPKSSPGTNSSHRNINW 242
           DKVLLPEAI GT+IPP PAPAP PD+AP AD+P+E S D  A+SP S+   +SSH+ I++
Sbjct: 180 DKVLLPEAILGTNIPPAPAPAPTPDIAPAADSPTEHSADSKASSPSSTHDDSSSHKFISY 239

Query: 243 GICSQLILAVSGLMVLF 259
           GI + L+LA  G++VLF
Sbjct: 240 GIWANLVLATFGVLVLF 256

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357495457|ref|XP_003618017.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355519352|gb|AET00976.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|388498250|gb|AFK37191.1| unknown [Medicago truncatula]

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/218 (67%), Positives = 183/218 (83%), Gaps = 1/218 (0%)

Query: 44  EHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSL 103
           + VNLT+LL+VAGPFHTFL YL+STKVL+TFQNQANNT+EGITIFVPKD +F SLKKPSL
Sbjct: 45  DFVNLTELLTVAGPFHTFLQYLQSTKVLDTFQNQANNTEEGITIFVPKDSSFASLKKPSL 104

Query: 104 ANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGW 163
           + L  D++KQ+ LFHALPH+YS ADFKNLSQ +   T+AGGDY LNFTD SG V I+SGW
Sbjct: 105 SKLKDDEIKQVILFHALPHFYSLADFKNLSQTASTPTFAGGDYTLNFTDNSGTVKINSGW 164

Query: 164 SRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADAPSE-VSDG 222
           S TKV+S+VH+TDPVA+YQVDKVLLPEAIFGTDIPP+ APAP P++AP AD+P+E  +D 
Sbjct: 165 SITKVTSAVHATDPVAIYQVDKVLLPEAIFGTDIPPVLAPAPTPEIAPAADSPTEQSADS 224

Query: 223 GAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL 260
            ++SP SSP  +SS++ +++GI   L+LA  GL+V+ L
Sbjct: 225 KSSSPSSSPDRSSSYKIVSYGIWGNLVLATFGLVVVIL 262

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131760|ref|XP_002321171.1| fasciclin-like arabinogalactan protein 12.1 [Populus trichocarpa] gi|222861944|gb|EEE99486.1| fasciclin-like arabinogalactan protein 12.1 [Populus trichocarpa]

 Score =  283 bits (725), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 146/172 (84%), Positives = 160/172 (93%), Gaps = 1/172 (0%)

Query: 45  HVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLA 104
           +VNLTDLLSVAGPFH FLNYLESTKV++TFQNQANNTDEGITIFVPKDDAFK+LKK SL+
Sbjct: 35  YVNLTDLLSVAGPFHNFLNYLESTKVIDTFQNQANNTDEGITIFVPKDDAFKNLKKASLS 94

Query: 105 NLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG-GDYKLNFTDVSGAVHIDSGW 163
           NLTQDQLKQL LFHALPHYYS +DFKNLSQ+SPVST+AG G Y LNFTD SG VH+DSGW
Sbjct: 95  NLTQDQLKQLILFHALPHYYSLSDFKNLSQVSPVSTFAGAGGYALNFTDTSGTVHLDSGW 154

Query: 164 SRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIPPMPAPAPAPDVAPPADA 215
           S+TKVSSSVHSTDPVA+YQVDKVLLPEAIFGT+IPP PAPAPAPD +P AD+
Sbjct: 155 SKTKVSSSVHSTDPVAIYQVDKVLLPEAIFGTNIPPTPAPAPAPDTSPTADS 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
TAIR|locus:2049218	254	FLA7 "FASCICLIN-like arabinoog	0.815	0.834	0.635	7.4e-66
TAIR|locus:2175153	249	FLA12 "FASCICLIN-like arabinog	0.557	0.582	0.430	2.5e-26
TAIR|locus:2024122	247	FLA9 "FASCICLIN-like arabinoog	0.565	0.595	0.405	9.7e-25
TAIR|locus:2054769	247	FLA6 "FASCICLIN-like arabinoga	0.569	0.599	0.403	8.7e-24
TAIR|locus:2167664	247	FLA13 "AT5G44130" [Arabidopsis	0.773	0.813	0.328	2.9e-23
TAIR|locus:2143443	246	FLA11 "FASCICLIN-like arabinog	0.792	0.837	0.310	1e-22
TAIR|locus:2101841	422	FLA10 "FASCICLIN-like arabinog	0.55	0.338	0.373	2.2e-18
TAIR|locus:2050822	420	FLA8 "FASCICLIN-like arabinoga	0.55	0.340	0.36	2.2e-17
TAIR|locus:2075185	420	SOS5 "salt overly sensitive 5"	0.561	0.347	0.324	4.4e-14
TAIR|locus:2162197	424	FLA1 "FASCICLIN-like arabinoga	0.553	0.339	0.295	1.1e-10

TAIR|locus:2049218 FLA7 "FASCICLIN-like arabinoogalactan 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 138/217 (63%), Positives = 162/217 (74%)

Query:    44 EHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSL 103
             E+VNLT+LLSVAGPFHTFL+YL ST V+ETFQNQANNT+EGITIFVPKDDAFK+ K P L
Sbjct:    43 ENVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPL 102

Query:   104 ANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGW 163
             +NLT+DQLKQL LFHALPHYYS ++FKNLSQ  PVST+AGG Y L FTDVSG V IDS W
Sbjct:   103 SNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLW 162

Query:   164 SRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIXXXXXXXXXXXXXXXXXXXSEVSDGG 223
             +RTKVSSSV STDPVA+YQV++VLLPEAIFGTD+                   S     G
Sbjct:   163 TRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADSEG 222

Query:   224 AASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL 260
             A+SPKSS   NS  + +     + + + +SGL+ LFL
Sbjct:   223 ASSPKSSH-KNSGQKLL----LAPISMVISGLVALFL 254

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2175153 FLA12 "FASCICLIN-like arabinogalactan-protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 65/151 (43%), Positives = 91/151 (60%)

Query:    47 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
             N+T +L  AG F  F+  L+ST V      Q NN+D GITIF P D +F  LK  +L +L
Sbjct:    39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98

Query:   107 TQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG----GDYKLNFTDVSGAVHIDSG 162
             T +Q  +L  FH +P Y S ++F+ +S  +P+ T AG    G + LN T     V+I SG
Sbjct:    99 TDEQQVELIQFHVIPSYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSG 156

Query:   163 WSRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
              + T VS +V+S   +A+YQVDKVLLP+ +F
Sbjct:   157 VTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2024122 FLA9 "FASCICLIN-like arabinoogalactan 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 62/153 (40%), Positives = 92/153 (60%)

Query:    46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
             +NLT +L   G F TF++ L  T+V      Q N++ EG+T+F P D+AF++LK  +L  
Sbjct:    38 INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97

Query:   106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGG-D---YKLNFTDVSGAVHIDS 161
             L+ D   +L L+H  P YYS  D   LS  +PV T A G D   Y LNFT  +  +++ +
Sbjct:    98 LSPDDQVKLILYHVSPKYYSMDDL--LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVST 155

Query:   162 GWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFG 194
             G+  T++S+S+    P+A+Y VD VLLP  +FG
Sbjct:   156 GYVETRISNSLRQQRPLAVYVVDMVLLPGEMFG 188

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2054769 FLA6 "FASCICLIN-like arabinogalactan 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 63/156 (40%), Positives = 92/156 (58%)

Query:    46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
             +NLT +L     F T +  L +T+V      Q N++D+G+TIF P D+AF  LK  +L +
Sbjct:    37 INLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNS 96

Query:   106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYA----GGDYKLNFTDV--SGAVHI 159
             LT  Q  QL L+H +P YYS +D   L   +PV T A    GG + LNFT    S  V++
Sbjct:    97 LTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNV 154

Query:   160 DSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGT 195
              +G   T++++++    P+A+Y VD VLLPE +FGT
Sbjct:   155 STGVVETRINNALRQQFPLAVYVVDSVLLPEELFGT 190

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2167664 FLA13 "AT5G44130" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 69/210 (32%), Positives = 106/210 (50%)

Query:    46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
             +N+T +L   G F T +  L +T++      Q N++ EG+T+  P D+AF++LK  +L  
Sbjct:    35 INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNK 94

Query:   106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYA-----GGDYKLNFTDVSGAVHID 160
             L+ D   +L L+H  P +Y+  D   LS  +PV T A     GG Y LNFT     V++ 
Sbjct:    95 LSPDDQVKLILYHVSPKFYTLEDL--LSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVS 152

Query:   161 SGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIXXXXXXXXXXXXXXXXXXXSEVS 220
             +G   T++S+S+    P+A+Y VD VLLPE +FG +                    SE S
Sbjct:   153 TGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFG-ERKISPMAPPPKSKSPDVSDDSE-S 210

Query:   221 DGGAASPKSSPGTNSSHRNINWGICSQLIL 250
                AA+P  S  + S   N   G+   L++
Sbjct:   211 SKKAAAPSESEKSGSGEMNTGLGLGLGLVV 240

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2143443 FLA11 "FASCICLIN-like arabinogalactan-protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 68/219 (31%), Positives = 110/219 (50%)

Query:    47 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDE-GITIFVPKDDAFKSLKKPSLAN 105
             N+T +L  AG F  F+  L+ST+  +    Q N++   G+T+F P D+AF SLK  +L +
Sbjct:    36 NITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNS 95

Query:   106 LTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAG----GDYKLNFTDVSGAVHIDS 161
             L+  Q  QL  FH LP   +   F+ +S  +P+ T AG    G + LN T     V+I +
Sbjct:    96 LSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNITSSGNQVNITT 153

Query:   162 GWSRTKVSSSVHSTDPVALYQVDKVLLPEAIFGTDIXXXXXXXXXXXXXXXXXXXSEVSD 221
             G     V++SV+S   +A+YQVD+VLLP A+FG+ +                    +  D
Sbjct:   154 GVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVSKGSASGGD--D 211

Query:   222 GGAASPKSSPGTNSSHRNINWGICSQLILAVSGLMVLFL 260
             GG     S+  +++      +GI    + A++    L++
Sbjct:   212 GG----DSTDSSDAERTGFGFGIRITTVAAIAASSSLWI 246

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2101841 FLA10 "FASCICLIN-like arabinogalactan-protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 56/150 (37%), Positives = 84/150 (56%)

Query:    47 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
             N+T LL  AG   TF N L S+ V++TF++     ++G+T+F P D+AFK+   P L NL
Sbjct:   190 NITGLLEKAG-CKTFANLLVSSGVIKTFES---TVEKGLTVFAPSDEAFKARGVPDLTNL 245

Query:   107 TQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSG-AVHIDSGWS 164
             TQ ++  L  +HAL  Y      K N   +S ++T   G Y L  T  SG  V + +G  
Sbjct:   246 TQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLT-TSTSGDEVILHTGVG 304

Query:   165 RTKVSSSVHSTDPVALYQVDKVLLPEAIFG 194
              ++++ +V    PV ++ VD VLLP  +FG
Sbjct:   305 PSRLADTVVDETPVVIFTVDNVLLPAELFG 334

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2050822 FLA8 "FASCICLIN-like arabinogalactan protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 2.2e-17, P = 2.2e-17
 Identities = 54/150 (36%), Positives = 85/150 (56%)

Query:    47 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
             N+T LL  AG   TF N L S+ VL+T+++     ++G+T+F P D+AFK+   P L  L
Sbjct:   189 NITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAFKAEGVPDLTKL 244

Query:   107 TQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSG-AVHIDSGWS 164
             TQ ++  L  +HAL  Y      K N + +S ++T   G + L  T  SG  V + +G +
Sbjct:   245 TQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLT-TSTSGDEVILHTGVA 303

Query:   165 RTKVSSSVHSTDPVALYQVDKVLLPEAIFG 194
              ++++ +V    PV ++ VD VLLP  +FG
Sbjct:   304 PSRLADTVLDATPVVIFTVDNVLLPAELFG 333

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2075185 SOS5 "salt overly sensitive 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 4.4e-14, P = 4.4e-14
 Identities = 50/154 (32%), Positives = 83/154 (53%)

Query:    46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSL-KKPSLA 104
             +NLT +L     F+  L+ L ++ V+  F+N       GIT+FVP D AF  L    +L 
Sbjct:   206 INLTQILINGHNFNVALSLLVASGVITEFENDERGA--GITVFVPTDSAFSDLPSNVNLQ 263

Query:   105 NLTQDQLKQLCLFHALPHYYSFADFKNLSQ-MSP-VST--YAGGDYKLNFTDVSGA-VHI 159
             +L  +Q   +  FH L  YY+    ++++  + P ++T     G Y LN + V+G+ V I
Sbjct:   264 SLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVTI 323

Query:   160 DSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
             +SG     V+ +    +PV+++ V KVLLP+ +F
Sbjct:   324 NSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF 357

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0030247 "polysaccharide binding" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2162197 FLA1 "FASCICLIN-like arabinogalactan 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 44/149 (29%), Positives = 73/149 (48%)

Query:    46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLAN 105
             +NLT ++S  G        L +    +T+Q    + + G+T+F P DDA K    P   N
Sbjct:   185 MNLTGIMSAHGCKVFAETLLTNPGASKTYQE---SLEGGMTVFCPGDDAMKGFL-PKYKN 240

Query:   106 LTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWS 164
             LT  + +    F A+P YYS A  K N   M+ ++T     ++L   +    V + +  +
Sbjct:   241 LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANKFELTVQNDGEKVTLKTRIN 300

Query:   165 RTKVSSSVHSTDPVALYQVDKVLLPEAIF 193
               K+  ++    P+A+Y  DKVLLP+ +F
Sbjct:   301 TVKIVDTLIDEQPLAIYATDKVLLPKELF 329

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SJ81	FLA7_ARATH	No assigned EC number	0.6259	0.9692	0.9921	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PtrFLA12-2 fasciclin-like arabinogalactan protein 12.2 (263 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	260
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	2e-24
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	5e-18
COG2335	187	COG2335, COG2335, Secreted and surface protein con	3e-04

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 94.3 bits (235), Expect = 2e-24
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 15/136 (11%)

Query: 56  GPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL--TQDQLKQ 113
             F TF+  L++  +++T     N +    T+F P D+AF  L   +L  L   ++QLK 
Sbjct: 1   PGFSTFVALLKAAGLVDTL----NGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKN 56

Query: 114 LCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVH 173
           L  +H +P   + +D KN      ++T  G   ++N T   G V ++      +V  S  
Sbjct: 57  LLKYHVVPGRLTSSDLKNGGT---LATLQGSKLRVNVTG--GTVTVNG----ARVVQSDI 107

Query: 174 STDPVALYQVDKVLLP 189
                 ++ +DKVLLP
Sbjct: 108 EATNGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 76.6 bits (189), Expect = 5e-18
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 86  TIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGD 145
           T+F P D+AF+ L  P L +L  D+LK L L+H +P   S AD  N      + T AG  
Sbjct: 1   TVFAPTDEAFQKLP-PDLNSLLADKLKNLLLYHVVPGRLSSADLLNGGT---LPTLAGSK 56

Query: 146 YKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPE 190
            ++  +  SG V ++      ++  +  +     ++ +D+VLLP 
Sbjct: 57  LRITRSGGSGTVTVNG----ARIVEADIAATNGVVHVIDRVLLPP 97

Length = 97

>gnl|CDD|225214 COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 47/205 (22%)

Query: 1   MEKMEVSMALMISALLLLFSSANAQKAASPPTFSPTPAPAP-APEHVNLTDLLSVA---G 56
           +E  +   A+    LL          A + P  +        A    N  D++  A    
Sbjct: 8   IEPPQREYAVNALELLR---------AVAVPDLANGTLETGRAAVKGNRADIVESAANNP 58

Query: 57  PFHTFLNYLESTKVLETFQNQANNTDEGI-TIFVPKDDAFKSLKKPSLANLTQ----DQL 111
            F T +  L++  +++T        + G  T+F P ++AF  L   +L  L +      L
Sbjct: 59  SFTTLVAALKAAGLVDTLN------ETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLL 112

Query: 112 KQLCLFHALPHYYSFADFKNLSQMSPVS------TYAGGDYKLNFTDVSGA-VHIDSGWS 164
            ++  +H +    + AD K+   +  V          GG   +N   V+ A ++  +G  
Sbjct: 113 TKILTYHVVEGKITAADLKSSGSVKTVQGADLKIKVTGGGVYVNDATVTIADINASNG-- 170

Query: 165 RTKVSSSVHSTDPVALYQVDKVLLP 189
                          ++ +DKVL+P
Sbjct: 171 --------------VIHVIDKVLIP 181

Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	260
COG2335	187	Secreted and surface protein containing fasciclin-	99.93
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.9
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.84
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.2
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.03

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=4.3e-26  Score=195.79  Aligned_cols=137  Identities=23%  Similarity=0.391  Sum_probs=122.1

Q ss_pred             CCCCCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC----CHHHHHHHHhhc
Q 024902           43 PEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL----TQDQLKQLCLFH  118 (260)
Q Consensus        43 ~~~~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L----s~~~L~~LL~yH  118 (260)
                      -...+|.+...++++|++|..+++.++|.++|++.     +.||||||||+||.+|+.++++.|    ++.+|..+|.||
T Consensus        45 ~~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~-----gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYH  119 (187)
T COG2335          45 GNRADIVESAANNPSFTTLVAALKAAGLVDTLNET-----GPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYH  119 (187)
T ss_pred             cchhHHHHHHccCcchHHHHHHHHhhhhHHHhcCC-----CCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEE
Confidence            35568888888999999999999999999999995     999999999999999999988887    689999999999


Q ss_pred             ccCCccChhhhccccCCcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCCCCc
Q 024902          119 ALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAIF  193 (260)
Q Consensus       119 Ilp~~~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~~lf  193 (260)
                      |+++++..+++...   +.++|+.|..++++++.  +.++|+    +++|+..++..+||+||+||+||+|+...
T Consensus       120 Vv~Gk~~~~~l~~~---~~v~t~~G~~~~i~~~~--~~~~Vn----~a~v~~~di~a~NgvIhvID~Vl~Pp~~~  185 (187)
T COG2335         120 VVEGKITAADLKSS---GSVKTVQGADLKIKVTG--GGVYVN----DATVTIADINASNGVIHVIDKVLIPPMDL  185 (187)
T ss_pred             EEcCcccHHHhhcc---ccceeecCceEEEEEcC--CcEEEe----eeEEEeccEeccCcEEEEEeeeccCCCcc
Confidence            99999999999864   68999999988888874  448888    48888888888899999999999998743

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.90  E-value=8.5e-24  Score=169.21  Aligned_cols=125  Identities=24%  Similarity=0.454  Sum_probs=99.9

Q ss_pred             CChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC--CHHHHHHHHhhcccCCccChhhhcccc
Q 024902           56 GPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL--TQDQLKQLCLFHALPHYYSFADFKNLS  133 (260)
Q Consensus        56 g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L--s~~~L~~LL~yHIlp~~~~~~~l~~~s  133 (260)
                      ++||+|.++|+++|+.+.|++.    .+.||||||+|+||++++....+.+  +.++++++|+||++++.++.+++....
T Consensus         1 ~~~s~f~~~l~~~~l~~~l~~~----~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~   76 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLADLLNDS----DGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGK   76 (128)
T ss_dssp             -TTHHHHHHHHHTTCHHHHGCS----SSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCHH
T ss_pred             CCHHHHHHHHHHcCCHHHHhcC----CCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcccc
Confidence            4799999999999999999532    4899999999999999865544544  689999999999999999999998741


Q ss_pred             CCcceec-ccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccC
Q 024902          134 QMSPVST-YAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLP  189 (260)
Q Consensus       134 ~~~~v~T-l~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP  189 (260)
                        ..++| +.|+.+.++....++.+.|++   +++|++.++..+||+||+||+||+|
T Consensus        77 --~~~~t~~~g~~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   77 --QTLETLLNGQPLRVSSSPSNGTIYVNG---KARIVKSDIEASNGVIHIIDDVLIP  128 (128)
T ss_dssp             --EEEEBSSTTCEEEEEEEGGTTEEEECC---EEEESEEEEEESSEEEEEESS-TSS
T ss_pred             --ccceeccCCCEEEEEEEecCCceEecC---ceEEEeCCEEeCCEEEEEECceECc
Confidence              37898 788888888774467888885   5888877778889999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.84  E-value=3.7e-21  Score=148.25  Aligned_cols=98  Identities=32%  Similarity=0.519  Sum_probs=81.4

Q ss_pred             EEEecCcHHHhcCCccccccCCHH-HHHHHHhhcccCCccChhhhccccCCcceecccCCceeEEEEecCCeEEEeeccc
Q 024902           86 TIFVPKDDAFKSLKKPSLANLTQD-QLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWS  164 (260)
Q Consensus        86 TVFAPTD~AF~~L~~~~l~~Ls~~-~L~~LL~yHIlp~~~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~  164 (260)
                      |||||+|+||+++....++++..+ .++++|+|||++++++.++|..+   ..++|+.|..++++.....+.+.+++   
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~~---~~~~Tl~g~~l~v~~~~~~~~i~in~---   74 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLNG---GTLPTLAGSKLRVTRSGDSGTVTVNG---   74 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhccC---CccccCCCCEEEEEEeCCCCeEEEcc---
Confidence            899999999999987656666433 89999999999999999999873   68999999877766654326788874   


Q ss_pred             eeEEeeeeccCCCcEEEEeCccccCC
Q 024902          165 RTKVSSSVHSTDPVALYQVDKVLLPE  190 (260)
Q Consensus       165 ~A~V~~~v~~~~ngvIh~ID~VLlP~  190 (260)
                       ++|+..++..+||+||+||+||+|+
T Consensus        75 -~~v~~~di~~~nGvih~Id~vL~P~   99 (99)
T smart00554       75 -ARIVEADIAATNGVVHVIDRVLLPP   99 (99)
T ss_pred             -eEEEECCEecCCeEEEEECceeCCC
Confidence             6888777777889999999999986

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.20  E-value=1.6e-11  Score=123.56  Aligned_cols=133  Identities=18%  Similarity=0.203  Sum_probs=101.1

Q ss_pred             CCCCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccCCHHHHHHHHhhcccCCc
Q 024902           44 EHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHY  123 (260)
Q Consensus        44 ~~~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~Ls~~~L~~LL~yHIlp~~  123 (260)
                      ...++.++..++. .+++.+++.+-|+.+.|...     +.+|+|+|+|++|+.+.....    +..++++|+||+++.+
T Consensus       372 ~~~~l~~La~e~~-~st~~rlv~elgll~~L~~n-----~e~t~~lp~n~~fd~~~~~~~----r~l~~qIL~~HII~~~  441 (682)
T KOG1437|consen  372 SLKNLMSLAREDE-ISTSMRLVAELGLLTALAPN-----DEATLLLPTNNLFDDLTPLES----RRLAEQILYNHIIPEY  441 (682)
T ss_pred             hHHHHHHHHhccc-ccHHHHHHHhccceEEEcCC-----CceEEeeehhhhccCCChhhh----HHHHHHHHHHhCcchh
Confidence            3557777776655 79999999999988866653     559999999999999764322    3338999999999999


Q ss_pred             cChhhhccccCCcceecccCCceeEEEEecCCe---EEEeeccceeEEeeeeccCCCcEEEEeCccccC
Q 024902          124 YSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGA---VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLP  189 (260)
Q Consensus       124 ~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~---V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP  189 (260)
                      .+.++..++.  ..++|+.|..+..-+.+..+.   ..+..|.. +.|+.++....||+||.||+||.|
T Consensus       442 ~~~~~~y~~~--~~v~t~g~~~l~~fv~r~~~s~~~t~i~~~~~-~~Ii~aDi~~~nGvvH~id~vl~p  507 (682)
T KOG1437|consen  442 LTSSSMYNGQ--TTVRTLGKNKLLYFVYRHSVSANVTDILIGNE-ACIIEADISVKNGVVHIIDRVLDP  507 (682)
T ss_pred             hhhhhhhccc--ceeeccCCeEEEEEEecccccccceeeeccce-eeEEecccceecCceEEeeEEcCc
Confidence            9999998863  489999886655444432222   22333334 888888888999999999999999

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.03  E-value=9.4e-10  Score=110.88  Aligned_cols=133  Identities=18%  Similarity=0.219  Sum_probs=93.8

Q ss_pred             CCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccCCHHHHHHHHhhcccCCccC
Q 024902           46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYS  125 (260)
Q Consensus        46 ~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~Ls~~~L~~LL~yHIlp~~~~  125 (260)
                      .++.+.|++++.+|.|.++++..++.+++...     +.||+|||||+||.+...+...--.+..+..+++||++++.+.
T Consensus       508 ~~l~~~l~~d~r~s~~~~~le~~~l~e~l~~~-----~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~  582 (682)
T KOG1437|consen  508 VSLMEDLKTDGRISGTVQGLEGVLLPEELTPE-----GNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSR  582 (682)
T ss_pred             ccHHHHHhhccchhhhHHhhhhcCChhhhccC-----CceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceee
Confidence            68999999999999999999999999999664     8999999999999997754433125788999999999998775


Q ss_pred             hhhhccccCCcceecccCCceeEEEEecCCeEEEee----cc-ceeEEeeeeccCCCcEEEEeCccccCCCCc
Q 024902          126 FADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDS----GW-SRTKVSSSVHSTDPVALYQVDKVLLPEAIF  193 (260)
Q Consensus       126 ~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~----G~-~~A~V~~~v~~~~ngvIh~ID~VLlP~~lf  193 (260)
                         +.-.   ..-.+.. + +.+++.  ++.+.+..    |. ...+++...+..-||++|+||+||-|++++
T Consensus       583 ---ls~~---~~~~v~~-~-~k~s~~--~~~~~~~~~~~~~~vn~e~~~~~~i~~~n~~~h~i~~vl~p~~l~  645 (682)
T KOG1437|consen  583 ---LSLG---SSPYVMI-Q-VKLSLR--GDHLFFSLVNPRGDVNKERLVGIDIMGTNGVVHVIDLVLKPPDLP  645 (682)
T ss_pred             ---eecc---cccceee-e-eeEEEe--cccEEeeeeccccceeeeeeeccceeeecceeEEEEEEcccCcch
Confidence               2211   1111111 1 334433  22232221    22 234455555666789999999999998554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	260
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	2e-08
2vxp_A	132	Transforming growth factor-beta-induced protein IG	2e-08
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	5e-08
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	3e-07
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	5e-07

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 33/153 (21%), Positives = 67/153 (43%), Gaps = 27/153 (17%)

Query: 47  NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
           ++ +  + AG F T L   E+  +++T +      D   T+F P D AF +L + ++ +L
Sbjct: 4   DIVETATGAGSFTTLLTAAEAAGLVDTLKG-----DGPFTVFAPTDAAFAALPEGTVEDL 58

Query: 107 TQ----DQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSG 162
            +    ++L ++  +H +P     +D   L++     T  GG   +    + G   ++  
Sbjct: 59  LKPENKEKLTEILTYHVVPGEVMSSD---LTEGMTAETVEGGALTVT---LEGGPKVN-- 110

Query: 163 WSRTKVSSSVHSTDPVA----LYQVDKVLLPEA 191
                   S+   D  A    ++ +D VL+P A
Sbjct: 111 ------GVSISQPDVDASNGVIHVIDGVLMPGA 137

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 24/147 (16%)

Query: 47  NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL 106
            + D+L     F   +  ++S  + ET   +        T+F P ++AF++L     + L
Sbjct: 3   TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGV-----YTVFAPTNEAFRALPPRERSRL 57

Query: 107 TQD--QLKQLCLFHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWS 164
             D  +L  +  +H             +  +  + +  G    L  +  +  V ++    
Sbjct: 58  LGDAKELANILKYHIGDEILVSGG---IGALVRLKSLQGDK--LEVSLKNNVVSVN---- 108

Query: 165 RTKVSSSVHSTDPVA----LYQVDKVL 187
                  V   D +A    ++ +  VL
Sbjct: 109 ----KEPVAEPDIMATNGVVHVITNVL 131

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 51.9 bits (124), Expect = 5e-08
 Identities = 22/170 (12%), Positives = 52/170 (30%), Gaps = 15/170 (8%)

Query: 36  TPAPAPAPEHVNLTDLLSVAGPFHTFLNYLEST--KVLETFQNQANNTDEGITIFVPKDD 93
             A     + +      +  G    F   +      VL+   +        +TI  P ++
Sbjct: 2   AAADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTE-----VTILAPSNE 56

Query: 94  AFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKN--LSQMSPVSTYAGGDYKLNFT 151
           A+ S    ++    +++++Q+   H +    +    +    + ++ V T       L F 
Sbjct: 57  AWNSSNINNVLR-DRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNT-FLYFN 114

Query: 152 DVSGAVHIDSGWSRTKVSSSVHSTDPVA----LYQVDKVLLPEAIFGTDI 197
                           V+++V   D       ++ +D VL          
Sbjct: 115 VRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVPYTTVLGK 164

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 49.6 bits (118), Expect = 3e-07
 Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 17/162 (10%)

Query: 43  PEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPS 102
             +  +   L             + +   +      NNT    T FVP+D  ++  +   
Sbjct: 156 VPYTTVLGKLESDPMMSDTYKMGKFSHFNDQL----NNTQRRFTYFVPRDKGWQKTELDY 211

Query: 103 LANLTQ-------DQLKQLCLFHALP--HYYSFADFKNLSQMS--PVSTYAGGDYKLNFT 151
            +   +          K +   H       Y+  D    SQ S   +         +   
Sbjct: 212 PSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVE 271

Query: 152 DVSGAVHIDSGWSRTKVSSS-VHSTDPVALYQVDKVLLPEAI 192
           + +G   I   + +  V    V  T+ + ++ +D  LL E  
Sbjct: 272 EEAGRYVIIWNYKKINVYRPDVECTNGI-IHVIDYPLLEEKD 312

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 47.4 bits (113), Expect = 5e-07
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 27/181 (14%)

Query: 18  LFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQ 77
           L     A+ AA+ PT    PA         +    S      T    L      +   N 
Sbjct: 3   LVGPGCAEYAAANPT---GPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQV--NL 57

Query: 78  ANNTDEG-ITIFVPKDDAFKSLKKPSLANLTQD--QLKQLCLFHALPHYYSFADFKNLSQ 134
            +  + G  T+F P + AF  L   ++  L  +   L  +  +H +    S A+      
Sbjct: 58  VDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANV----- 112

Query: 135 MSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVA----LYQVDKVLLPE 190
           +    T  G    +  T    ++ +         ++ V           +Y +D VL+P 
Sbjct: 113 VGTRQTLQGAS--VTVTGQGNSLKVG--------NADVVCGGVSTANATVYMIDSVLMPP 162

Query: 191 A 191
           A
Sbjct: 163 A 163

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	260
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.96
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.96
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.95
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.91
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.91

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.96  E-value=4.4e-30  Score=209.82  Aligned_cols=132  Identities=23%  Similarity=0.412  Sum_probs=115.6

Q ss_pred             CCCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC----CHHHHHHHHhhccc
Q 024902           45 HVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL----TQDQLKQLCLFHAL  120 (260)
Q Consensus        45 ~~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L----s~~~L~~LL~yHIl  120 (260)
                      ..||.++|+++++||+|+++|+++|+.++|++.     ++||||||+|+||++++.+.+++|    ++++++++|+|||+
T Consensus         2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~-----~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv   76 (137)
T 1w7d_A            2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKGD-----GPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVV   76 (137)
T ss_dssp             CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTSS-----SCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEE
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCC-----CCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEe
Confidence            358999999999999999999999999999985     899999999999999988777777    67899999999999


Q ss_pred             CCccChhhhccccCCcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCCC
Q 024902          121 PHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEA  191 (260)
Q Consensus       121 p~~~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~~  191 (260)
                      +++++.++|..+   ..++|++|+.  ++++.++| +.|++    ++|+..++...||+||+||+||+|+.
T Consensus        77 ~~~~~~~~l~~~---~~~~tl~G~~--l~v~~~~g-v~vn~----a~v~~~di~~~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           77 PGEVMSSDLTEG---MTAETVEGGA--LTVTLEGG-PKVNG----VSISQPDVDASNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             ESCCCTTTSCSS---EEEECTTSCE--EEEECTTS-CEETT----EECSBCCCBCSSSEEEBCSSCCSSCC
T ss_pred             CcEEcHHHhcCC---CeeeccCCce--EEEEecCC-EEEeC----cEEEECCeecCCeEEEEECeeeCCCC
Confidence            999999999874   5799999875  45555566 88874    78887777788999999999999974

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.96  E-value=8.5e-29  Score=200.99  Aligned_cols=129  Identities=16%  Similarity=0.258  Sum_probs=111.9

Q ss_pred             CCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC--CHHHHHHHHhhcccCCc
Q 024902           46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL--TQDQLKQLCLFHALPHY  123 (260)
Q Consensus        46 ~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L--s~~~L~~LL~yHIlp~~  123 (260)
                      .||.++|+++++||+|+++|+++|+.++|++.     ++||||||+|+||++++.+.++.|  ++++++++|+|||+++.
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~-----~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~   76 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNRE-----GVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEI   76 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSS-----CCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSC
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCC-----CCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCce
Confidence            48999999999999999999999999999984     899999999999999998776665  78999999999999999


Q ss_pred             cChhhhccccCCcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCcccc
Q 024902          124 YSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLL  188 (260)
Q Consensus       124 ~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLl  188 (260)
                      ++.+++...   ..++|++|+.+.+  +.+++.+.|++    ++|+..++...||+||+||+||+
T Consensus        77 ~~~~~l~~~---~~~~tl~G~~l~v--~~~~~~v~vn~----a~v~~~di~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           77 LVSGGIGAL---VRLKSLQGDKLEV--SLKNNVVSVNK----EPVAEPDIMATNGVVHVITNVLQ  132 (132)
T ss_dssp             CCSTTCSSC---EEEEBTTSSEEEE--EEETTEEEESS----CBEEEEEEEETTEEEEEESSCC-
T ss_pred             eehhhccCC---ceEecCCCCEEEE--EEeCCEEEEec----cEEEEcceecCCEEEEEECcEeC
Confidence            988888753   6899999976554  44577888874    78887777778999999999985

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.95  E-value=6.5e-29  Score=209.11  Aligned_cols=131  Identities=21%  Similarity=0.324  Sum_probs=114.0

Q ss_pred             CCCCHHHHHhhCCChHHHHHHHH-----HCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC--CHHHHHHHHh
Q 024902           44 EHVNLTDLLSVAGPFHTFLNYLE-----STKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL--TQDQLKQLCL  116 (260)
Q Consensus        44 ~~~nI~~iL~~~g~fStF~~lL~-----~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L--s~~~L~~LL~  116 (260)
                      ...+|.++|+++++||+|+++|+     ++|+.++|++.     + ||||||+|+||++++.+.++.|  ++++|+++|+
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~-----g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~   99 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSG-----Q-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILT   99 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSS-----S-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHH
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCC-----C-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHH
Confidence            55699999999999999999999     99999999984     6 9999999999999987777776  5789999999


Q ss_pred             hcccCCccChhhhccccCCcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCCC
Q 024902          117 FHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEA  191 (260)
Q Consensus       117 yHIlp~~~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~~  191 (260)
                      |||++++++.++|.     +.++|++|+.+  +++.+++.++|++    ++|+..++...||+||+||+||+|+.
T Consensus       100 yHvv~g~~~~~~l~-----g~~~Tl~G~~l--~v~~~~~~v~vn~----a~V~~~di~a~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          100 YHVVAGQTSPANVV-----GTRQTLQGASV--TVTGQGNSLKVGN----ADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             HTEEESCCCTTTSC-----EEEECTTSSEE--EEEECSSCEEETT----EECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hceECCEEcHHHhC-----CccccCCCCEE--EEEEECCEEEEec----cEEEECceEcCCEEEEEECcEeCCCC
Confidence            99999999999986     37999998754  4455567788874    88888777788999999999999974

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.91  E-value=1.3e-24  Score=199.49  Aligned_cols=139  Identities=16%  Similarity=0.279  Sum_probs=109.5

Q ss_pred             CCCHHHHHh------hCCChHHHHHHHHHCC--ChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC--CHHHHHHH
Q 024902           45 HVNLTDLLS------VAGPFHTFLNYLESTK--VLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL--TQDQLKQL  114 (260)
Q Consensus        45 ~~nI~~iL~------~~g~fStF~~lL~~tg--L~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L--s~~~L~~L  114 (260)
                      ..||+++|+      ++++||+|+++|+++|  |.++|++.     ++||||||+|+||+++.   +++|  ++++++++
T Consensus         5 ~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~-----~~~TvFAPtn~Af~~~~---~~~l~~~~~~l~~i   76 (324)
T 1o70_A            5 DTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSL-----TEVTILAPSNEAWNSSN---INNVLRDRNKMRQI   76 (324)
T ss_dssp             --------------CCHHHHHHHHHHHHHTCSHHHHHHHTC-----SSEEEEEECHHHHHHTC---THHHHTCHHHHHHH
T ss_pred             hhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCC-----CCeEEEEEChHhhhccc---HhhhhCCHHHHHHH
Confidence            468999998      6789999999999999  99999985     89999999999998864   3333  78999999


Q ss_pred             HhhcccCCccChhhhccccCC--cceecccCCc-eeEEEEec--CCeEEEeeccceeEEeeeeccCCCcEEEEeCccccC
Q 024902          115 CLFHALPHYYSFADFKNLSQM--SPVSTYAGGD-YKLNFTDV--SGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLP  189 (260)
Q Consensus       115 L~yHIlp~~~~~~~l~~~s~~--~~v~Tl~G~~-l~lnvt~~--g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP  189 (260)
                      |+|||++++++.++|..+...  ..++|+.|+. +.++++.+  ++.+.+++|..+++|+..++..+||+||+||+||.|
T Consensus        77 L~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NGvIhvID~VL~p  156 (324)
T 1o70_A           77 LNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGV  156 (324)
T ss_dssp             HHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTS
T ss_pred             HHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccccCcEEEEEchhhhh
Confidence            999999999999999875210  1789999876 67888743  346888888778999988888889999999999998


Q ss_pred             CC
Q 024902          190 EA  191 (260)
Q Consensus       190 ~~  191 (260)
                      +.
T Consensus       157 p~  158 (324)
T 1o70_A          157 PY  158 (324)
T ss_dssp             CC
T ss_pred             ch
Confidence            64

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.91  E-value=8.1e-25  Score=200.96  Aligned_cols=145  Identities=14%  Similarity=0.141  Sum_probs=118.4

Q ss_pred             CCCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCC----ccccccCC---HHHHHHHHhh
Q 024902           45 HVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLK----KPSLANLT---QDQLKQLCLF  117 (260)
Q Consensus        45 ~~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~----~~~l~~Ls---~~~L~~LL~y  117 (260)
                      ..++.++|+.+++|++|.++++.+|+.++|++.    .++||||||+|+||+++.    ...++.|.   +++++++|+|
T Consensus       158 ~~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~~----~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~y  233 (324)
T 1o70_A          158 YTTVLGKLESDPMMSDTYKMGKFSHFNDQLNNT----QRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILER  233 (324)
T ss_dssp             CSCHHHHHHHCGGGHHHHHHTTTTTTTGGGGCS----SSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHT
T ss_pred             hhhHHHHhhcCchHHHHHHHHHhhCHHHHhCCC----CCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHh
Confidence            358999999999999999999999999888742    479999999999999984    23344443   3599999999


Q ss_pred             cccCC--ccChhhhccccC---CcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCCCC
Q 024902          118 HALPH--YYSFADFKNLSQ---MSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEAI  192 (260)
Q Consensus       118 HIlp~--~~~~~~l~~~s~---~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~~l  192 (260)
                      ||+++  .|+.++|.+++.   ...++|++ +.+.++++..++.+.|+.+..+++|+..++...||+||+||+||+|+..
T Consensus       234 Hvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NGvIHvID~VL~P~~~  312 (324)
T 1o70_A          234 HLAISDKEYTMKDLVKFSQESGSVILPTFR-DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEKD  312 (324)
T ss_dssp             TEEEESSCCCHHHHHHHHHHSSSEEEECSS-SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCCTTT
T ss_pred             cEeCCcceEcHHHHhhhccCCCeeeeeccC-CcEEEEEEecCCEEEEEecCceeEEEEcccccCCCeEEEeceeecCCcc
Confidence            99998  888899986420   01489998 7788888766788999866567899877777788999999999999876


Q ss_pred             cC
Q 024902          193 FG  194 (260)
Q Consensus       193 f~  194 (260)
                      ..
T Consensus       313 ~~  314 (324)
T 1o70_A          313 VV  314 (324)
T ss_dssp             TC
T ss_pred             cc
Confidence            54

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	260
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	1e-13
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	7e-12
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	6e-04

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 64.0 bits (155), Expect = 1e-13
 Identities = 20/144 (13%), Positives = 51/144 (35%), Gaps = 13/144 (9%)

Query: 53  SVAGPFHTFLNYLEST--KVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQ 110
           +  G    F   +      VL+       N+   +TI  P ++A+ S    ++    +++
Sbjct: 1   AENGALRKFYEVIMDNGGAVLDDI-----NSLTEVTILAPSNEAWNSSNINNVLR-DRNK 54

Query: 111 LKQLCLFHALPHYYSFADFKNLS--QMSPVSTYAGGDYKLNFTDVSG---AVHIDSGWSR 165
           ++Q+   H +    +    +  +   ++ V T     +        G    + ++ G   
Sbjct: 55  MRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVN 114

Query: 166 TKVSSSVHSTDPVALYQVDKVLLP 189
             V  +  +     ++ +D VL  
Sbjct: 115 ATVIQADVAQTNGYVHIIDHVLGV 138

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 59.9 bits (144), Expect = 7e-12
 Identities = 18/155 (11%), Positives = 39/155 (25%), Gaps = 15/155 (9%)

Query: 48  LTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLT 107
           +   L             + +   +      NNT    T FVP+D  ++  +    +   
Sbjct: 3   VLGKLESDPMMSDTYKMGKFSHFNDQL----NNTQRRFTYFVPRDKGWQKTELDYPSAHK 58

Query: 108 -------QDQLKQLCLFHALPHYYSFADFKNLSQMSPVSTYA----GGDYKLNFTDVSGA 156
                      K +   H       +     +       +           +   + +G 
Sbjct: 59  KLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGR 118

Query: 157 VHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEA 191
             I   + +  V           ++ +D  LL E 
Sbjct: 119 YVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEK 153

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.4 bits (86), Expect = 6e-04
 Identities = 34/177 (19%), Positives = 60/177 (33%), Gaps = 19/177 (10%)

Query: 18  LFSSANAQKAASPPTFSPTPAPAPAPEHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQ 77
           L     A+ AA+ PT    PA         +    S      T    L      +   N 
Sbjct: 3   LVGPGCAEYAAANPT---GPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQV--NL 57

Query: 78  ANNTDEG-ITIFVPKDDAFKSLKKPSLANL--TQDQLKQLCLFHALPHYYSFADFKNLSQ 134
            +  + G  T+F P + AF  L   ++  L      L  +  +H +    S A+     Q
Sbjct: 58  VDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVGTRQ 117

Query: 135 MSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEA 191
               ++       +  T    ++ + +      V   V + +   +Y +D VL+P A
Sbjct: 118 TLQGAS-------VTVTGQGNSLKVGNA---DVVCGGVSTANAT-VYMIDSVLMPPA 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	260
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.94
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.9
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.9

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=6.7e-28  Score=201.57  Aligned_cols=131  Identities=20%  Similarity=0.302  Sum_probs=112.4

Q ss_pred             CCCCHHHHHhhCCChHHHHHHHH-----HCCChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccC--CHHHHHHHHh
Q 024902           44 EHVNLTDLLSVAGPFHTFLNYLE-----STKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANL--TQDQLKQLCL  116 (260)
Q Consensus        44 ~~~nI~~iL~~~g~fStF~~lL~-----~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~L--s~~~L~~LL~  116 (260)
                      .+.+|.+.++++++||+|..+|+     ++||.+.|++      ++||||||||+||++++.+.++.|  ++++|+++|+
T Consensus        26 ~~~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~------gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~   99 (163)
T d1nyoa_          26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS------GQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILT   99 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS------SSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHH
T ss_pred             ccchHHHHHhcCCchHHHHHHHhhccccccchhHhhcC------CCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhh
Confidence            45689999999999999999998     4799999975      789999999999999998777766  5688999999


Q ss_pred             hcccCCccChhhhccccCCcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCCC
Q 024902          117 FHALPHYYSFADFKNLSQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEA  191 (260)
Q Consensus       117 yHIlp~~~~~~~l~~~s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~~  191 (260)
                      |||++++++.+++.     +.++|++|+.+.++.  +++.++|++    ++|+..++...||+||+||+||+||.
T Consensus       100 yHVv~g~~~~~~l~-----~~~~Tl~G~~l~v~~--~~~~i~v~~----a~Vv~~di~a~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         100 YHVVAGQTSPANVV-----GTRQTLQGASVTVTG--QGNSLKVGN----ADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             HTEEESCCCTTTSC-----EEEECTTSSEEEEEE--CSSCEEETT----EECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hhhhhhhhhhhhhh-----hhhhhccCcceeEEe--cCCEEEEec----eEEEECCeecCCcEEEEECccccCCC
Confidence            99999999998875     358999987655554  467788864    78888878888999999999999984

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.90  E-value=9.3e-25  Score=178.57  Aligned_cols=140  Identities=13%  Similarity=0.101  Sum_probs=106.0

Q ss_pred             CCHHHHHhhCCChHHHHHHHHHCCChHHHhcccCCCCCCeEEEecCcHHHhcCCcccc----c---cCCHHHHHHHHhhc
Q 024902           46 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSL----A---NLTQDQLKQLCLFH  118 (260)
Q Consensus        46 ~nI~~iL~~~g~fStF~~lL~~tgL~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l----~---~Ls~~~L~~LL~yH  118 (260)
                      .+|.++|+.+++|+.|+++++.+|+.++|++.    ++.||||||+|+||+++.....    +   ..++++++++|+||
T Consensus         1 ~Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~----~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~H   76 (157)
T d1o70a2           1 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNNT----QRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERH   76 (157)
T ss_dssp             SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGCS----SSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTT
T ss_pred             CcHHHHHHhCccHHHHHHHHHhCCHHHHHhCC----CCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeE
Confidence            37999999999999999999999999998874    5789999999999999753211    1   22478999999999


Q ss_pred             ccCCccChhh--hccc---cCCcceecccCCceeEEEEecCCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCC
Q 024902          119 ALPHYYSFAD--FKNL---SQMSPVSTYAGGDYKLNFTDVSGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPE  190 (260)
Q Consensus       119 Ilp~~~~~~~--l~~~---s~~~~v~Tl~G~~l~lnvt~~g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~  190 (260)
                      |+++......  +...   ......+|+ |+.+.+++...++.+.+......++|+..++...||+||+||+||+|+
T Consensus        77 iv~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a~NGviHvID~VLlp~  152 (157)
T d1o70a2          77 LAISDKEYTMKDLVKFSQESGSVILPTF-RDSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEE  152 (157)
T ss_dssp             EEEESSCCCHHHHHHHHHHSSSEEEECS-SSEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCCT
T ss_pred             EecccccchhhhhhhhhccCCceeEEec-CCcEEEEEEcCCcEEEEecCCccceEEECCEecCCeEEEEECceecCC
Confidence            9997543332  2111   001223443 556777777777777666555679999888888899999999999996

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.90  E-value=5.7e-24  Score=170.27  Aligned_cols=132  Identities=14%  Similarity=0.245  Sum_probs=103.0

Q ss_pred             hCCChHHHHHHHHHCC--ChHHHhcccCCCCCCeEEEecCcHHHhcCCccccccCCHHHHHHHHhhcccCCccChhhhcc
Q 024902           54 VAGPFHTFLNYLESTK--VLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKN  131 (260)
Q Consensus        54 ~~g~fStF~~lL~~tg--L~~~L~~~l~~t~~~~TVFAPTD~AF~~L~~~~l~~Ls~~~L~~LL~yHIlp~~~~~~~l~~  131 (260)
                      ++++|++|+++|+++|  +.++|++.     ++||||||+|+||+++....+. .++++++++|+|||+++.++.++|..
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~~-----~~~TvFAPtn~Af~~~~~~~~~-~~~~~l~~~l~yHiv~~~~~~~~l~~   75 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINSL-----TEVTILAPSNEAWNSSNINNVL-RDRNKMRQILNMHIIKDRLNVDKIRQ   75 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHTC-----SSEEEEEECHHHHHHTCTHHHH-TCHHHHHHHHHHTEESSCCCHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcCC-----CCEEEEEECHHHHhcCChhhhc-CCHHHHHHHHHhhccCCeEEHHHHhc
Confidence            4567999999999997  66778874     7899999999999998754332 27899999999999999999999876


Q ss_pred             ccC--CcceecccCCc-eeEEEEec--CCeEEEeeccceeEEeeeeccCCCcEEEEeCccccCCC
Q 024902          132 LSQ--MSPVSTYAGGD-YKLNFTDV--SGAVHIDSGWSRTKVSSSVHSTDPVALYQVDKVLLPEA  191 (260)
Q Consensus       132 ~s~--~~~v~Tl~G~~-l~lnvt~~--g~~V~V~~G~~~A~V~~~v~~~~ngvIh~ID~VLlP~~  191 (260)
                      ...  ...++|+.|+. +..++...  ...+.++.+..+++|+..++...||+||+||+||.||.
T Consensus        76 ~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NGvIH~ID~VL~~P~  140 (140)
T d1o70a1          76 KNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVPY  140 (140)
T ss_dssp             HTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSCC
T ss_pred             CcccCceEeeecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCeEEEEECCccCCcC
Confidence            421  13578888764 34455433  23455666667799998888888999999999999973