Citrus Sinensis ID: 024908

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL
cHHHHHHHcccccccEEEccccccEEEEEEEccccccEEEEEcccccccccccccccHHHHccccEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHccEEEccHHHHHHHccccccccHHHHHHHHHcccccEEEEEEccccEEEEEcccEEEEcccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccc
cHHHHHHHcccccccEEEcccccEEEEEEEEcccccEEEEEEEccccHHcccHHHccHHHHHHccEEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHHccEEEEcHHHHHHHcccccHHHHHHHHHHHHcccccEEEEEcccccEEEEEcccEEEEccEEEEEEcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccc
MLANILkennvdtsgvrydsTARTALAFVTLRADgereflffrhpsadmLLCESELDKnlikqgsifhygsisliaepcrSTQLAAMNLAKEsgsilsydpnlrlplwpseeaAREGIMSIWDqadiikvsddeitfltggddhnddnvvleklfhpnlkLLIVTEGskgcryytkefkgrvpgvktkavdttgagdsFVSGILNCLAADQNLIKDENRLREALLFANACGaltvtergaipalpTKEAALKLLHTVAAL
mlanilkennvdtsgvrydstaRTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTggddhnddNVVLEKLFHPNLKLLIVTEGSKGCRYytkefkgrvpgvktkavDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL
MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL
**************GVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHT****
MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTV***
MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL
MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVA**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGAIPALPTKEAALKLLHTVAAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query260 2.2.26 [Sep-21-2011]
O82616324 Putative fructokinase-5 O no no 0.976 0.783 0.667 1e-97
Q42896328 Fructokinase-2 OS=Solanum N/A no 0.969 0.768 0.614 2e-89
Q0JGZ6323 Fructokinase-1 OS=Oryza s no no 0.976 0.786 0.601 2e-89
Q9LNE3329 Probable fructokinase-2 O no no 0.969 0.765 0.622 2e-89
Q7XJ81328 Fructokinase-2 OS=Solanum N/A no 0.969 0.768 0.614 3e-89
Q9SID0325 Probable fructokinase-1 O no no 0.938 0.750 0.630 1e-88
A2WXV8323 Fructokinase-1 OS=Oryza s N/A no 0.976 0.786 0.597 1e-88
Q0J8G4336 Fructokinase-2 OS=Oryza s no no 0.984 0.761 0.600 3e-88
A2YQL4336 Fructokinase-2 OS=Oryza s N/A no 0.984 0.761 0.600 3e-88
Q9M1B9326 Probable fructokinase-4 O no no 0.969 0.773 0.606 6e-88
>sp|O82616|SCRK5_ARATH Putative fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1 Back     alignment and function desciption
 Score =  356 bits (913), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 171/256 (66%), Positives = 206/256 (80%), Gaps = 2/256 (0%)

Query: 1   MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
           ML NILK+N V++ GV +D+ ARTALAFVTL+ DGEREF+F+R+PSADMLL ESEL+K+L
Sbjct: 68  MLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADMLLKESELNKDL 127

Query: 61  IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 120
           IK+  IFHYGSISLI+EPCR+  +AAM  AK++G +LSYDPN+RLPLWPS EAA EGI S
Sbjct: 128 IKKAKIFHYGSISLISEPCRTAHMAAMKTAKDAGVLLSYDPNVRLPLWPSTEAAIEGIKS 187

Query: 121 IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 180
           IW++ADIIKVSDDE+TFLT GD   DD V+   L H  LKLLIVT+G KGCRYYTK+FKG
Sbjct: 188 IWNEADIIKVSDDEVTFLTRGDAEKDDVVL--SLMHDKLKLLIVTDGEKGCRYYTKKFKG 245

Query: 181 RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240
           RVPG   KAVDTTGAGDSFV   L  L  D +++ DE +L+EAL FANACGA+  T++GA
Sbjct: 246 RVPGYAVKAVDTTGAGDSFVGAFLVSLGKDGSILDDEGKLKEALAFANACGAVCTTQKGA 305

Query: 241 IPALPTKEAALKLLHT 256
           IPALPT   A KL+ +
Sbjct: 306 IPALPTPADAQKLMKS 321
May play an important role in maintaining the flux of carbon towards starch formation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 4
>sp|Q42896|SCRK2_SOLLC Fructokinase-2 OS=Solanum lycopersicum GN=FRK2 PE=2 SV=2 Back     alignment and function description
>sp|Q0JGZ6|SCRK1_ORYSJ Fructokinase-1 OS=Oryza sativa subsp. japonica GN=FRK1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LNE3|SCRK2_ARATH Probable fructokinase-2 OS=Arabidopsis thaliana GN=At1g06030 PE=2 SV=1 Back     alignment and function description
>sp|Q7XJ81|SCRK2_SOLHA Fructokinase-2 OS=Solanum habrochaites GN=FRK2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SID0|SCRK1_ARATH Probable fructokinase-1 OS=Arabidopsis thaliana GN=At2g31390 PE=2 SV=1 Back     alignment and function description
>sp|A2WXV8|SCRK1_ORYSI Fructokinase-1 OS=Oryza sativa subsp. indica GN=FRK1 PE=1 SV=1 Back     alignment and function description
>sp|Q0J8G4|SCRK2_ORYSJ Fructokinase-2 OS=Oryza sativa subsp. japonica GN=FRK2 PE=1 SV=1 Back     alignment and function description
>sp|A2YQL4|SCRK2_ORYSI Fructokinase-2 OS=Oryza sativa subsp. indica GN=FRK2 PE=1 SV=2 Back     alignment and function description
>sp|Q9M1B9|SCRK4_ARATH Probable fructokinase-4 OS=Arabidopsis thaliana GN=At3g59480 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
45550051350 fructokinase [Citrus unshiu] 1.0 0.742 0.996 1e-149
339896185336 fructokinase [Dimocarpus longan] 0.996 0.770 0.868 1e-131
224122496351 predicted protein [Populus trichocarpa] 0.992 0.735 0.806 1e-119
224134627349 predicted protein [Populus trichocarpa] 0.992 0.739 0.802 1e-118
359489519 371 PREDICTED: putative fructokinase-5-like 0.976 0.684 0.803 1e-118
356530913346 PREDICTED: putative fructokinase-5-like 1.0 0.751 0.776 1e-117
356559893345 PREDICTED: putative fructokinase-5-like 1.0 0.753 0.776 1e-117
147840622 371 hypothetical protein VITISV_012349 [Viti 0.976 0.684 0.799 1e-117
356574458341 PREDICTED: putative fructokinase-5-like 0.984 0.750 0.789 1e-116
225455661346 PREDICTED: fructokinase-2 [Vitis vinifer 0.988 0.742 0.774 1e-115
>gi|45550051|gb|AAS67872.1| fructokinase [Citrus unshiu] Back     alignment and taxonomy information
 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 259/260 (99%), Positives = 260/260 (100%)

Query: 1   MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
           MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL
Sbjct: 91  MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 150

Query: 61  IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 120
           IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS
Sbjct: 151 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 210

Query: 121 IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 180
           IWDQADIIKVSDDEITFLTGGDDHNDD+VVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG
Sbjct: 211 IWDQADIIKVSDDEITFLTGGDDHNDDHVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 270

Query: 181 RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240
           RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA
Sbjct: 271 RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 330

Query: 241 IPALPTKEAALKLLHTVAAL 260
           IPALPTKEAALKLLHTVAAL
Sbjct: 331 IPALPTKEAALKLLHTVAAL 350

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|339896185|gb|AEK21796.1| fructokinase [Dimocarpus longan] Back     alignment and taxonomy information
>gi|224122496|ref|XP_002318851.1| predicted protein [Populus trichocarpa] gi|222859524|gb|EEE97071.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224134627|ref|XP_002321869.1| predicted protein [Populus trichocarpa] gi|222868865|gb|EEF05996.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359489519|ref|XP_002272526.2| PREDICTED: putative fructokinase-5-like [Vitis vinifera] gi|296089121|emb|CBI38824.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356530913|ref|XP_003534023.1| PREDICTED: putative fructokinase-5-like [Glycine max] Back     alignment and taxonomy information
>gi|356559893|ref|XP_003548230.1| PREDICTED: putative fructokinase-5-like [Glycine max] Back     alignment and taxonomy information
>gi|147840622|emb|CAN61782.1| hypothetical protein VITISV_012349 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574458|ref|XP_003555364.1| PREDICTED: putative fructokinase-5-like [Glycine max] Back     alignment and taxonomy information
>gi|225455661|ref|XP_002263176.1| PREDICTED: fructokinase-2 [Vitis vinifera] gi|296084079|emb|CBI24467.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query260
TAIR|locus:2165361343 AT5G51830 [Arabidopsis thalian 0.976 0.740 0.775 4.1e-104
TAIR|locus:2028987384 AT1G66430 [Arabidopsis thalian 0.973 0.658 0.700 4.5e-91
TAIR|locus:2122789324 AT4G10260 [Arabidopsis thalian 0.969 0.777 0.681 2e-88
TAIR|locus:2198831329 AT1G06030 [Arabidopsis thalian 0.969 0.765 0.622 3.2e-81
TAIR|locus:2061320325 AT2G31390 [Arabidopsis thalian 0.938 0.750 0.630 8.5e-81
TAIR|locus:2097553326 AT3G59480 [Arabidopsis thalian 0.969 0.773 0.606 3.7e-80
TAIR|locus:2198821345 AT1G06020 [Arabidopsis thalian 0.969 0.730 0.614 6.8e-79
TAIR|locus:2011897146 AT1G50390 [Arabidopsis thalian 0.369 0.657 0.593 1.2e-41
UNIPROTKB|Q481A7336 CPS_2648 "Carbohydrate kinase, 0.946 0.732 0.363 2.2e-34
TIGR_CMR|CPS_2648336 CPS_2648 "carbohydrate kinase, 0.946 0.732 0.363 2.2e-34
TAIR|locus:2165361 AT5G51830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1031 (368.0 bits), Expect = 4.1e-104, P = 4.1e-104
 Identities = 197/254 (77%), Positives = 225/254 (88%)

Query:     1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
             MLA+IL+ NNVD SG+R+D  ARTALAFVTLR DGEREFLFFRHPSADMLL ESELDKNL
Sbjct:    85 MLADILRLNNVDNSGMRFDHNARTALAFVTLRGDGEREFLFFRHPSADMLLLESELDKNL 144

Query:    61 IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 120
             I++  IFHYGSISLI EPCRSTQL AM +AK +GS+LSYDPNLRLPLWPSEEAAR+ IMS
Sbjct:   145 IQKAKIFHYGSISLIEEPCRSTQLVAMKIAKAAGSLLSYDPNLRLPLWPSEEAARKEIMS 204

Query:   121 IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 180
             IW+ AD+IK+S+DEITFLTGGDD  DD+VVL+KLFHPNLKLL+V+EG  GCRYYT+EFKG
Sbjct:   205 IWNLADVIKISEDEITFLTGGDDPYDDDVVLQKLFHPNLKLLVVSEGPNGCRYYTQEFKG 264

Query:   181 RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240
             RV GVK K VDTTGAGD+FVSG+LN LA+D  L+KDE +LREALLFANACGA+TVTERGA
Sbjct:   265 RVGGVKVKPVDTTGAGDAFVSGLLNSLASDLTLLKDEKKLREALLFANACGAITVTERGA 324

Query:   241 IPALPTKEAALKLL 254
             IPA+P+ +A   LL
Sbjct:   325 IPAMPSMDAVQDLL 338
GO:0004747 "ribokinase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006014 "D-ribose metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2028987 AT1G66430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122789 AT4G10260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198831 AT1G06030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061320 AT2G31390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097553 AT3G59480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198821 AT1G06020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011897 AT1G50390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q481A7 CPS_2648 "Carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_2648 CPS_2648 "carbohydrate kinase, PfkB family" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.40.914
3rd Layer2.7.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00121190
fructokinase (EC-2.7.1.4) (351 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VIII.2574.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)
     •• 0.906
gw1.XIX.1506.1
glucosamine-fructose-6-phosphate aminotransferase (EC-2.6.1.16) (676 aa)
     •  0.899
gw1.XII.1035.1
L-iditol 2-dehydrogenase (EC-1.1.1.14) (348 aa)
     •  0.899
gw1.XI.1644.1
hypothetical protein (551 aa)
     •  0.899
gw1.VII.4031.1
6-phosphofructokinase (EC-2.7.1.11) (473 aa)
     •  0.899
gw1.VI.935.1
6-phosphofructokinase (EC-2.7.1.11) (467 aa)
     •  0.899
gw1.II.3030.1
glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)
     •  0.899
gw1.263.13.1
6-phosphofructokinase (EC-2.7.1.11) (443 aa)
     •  0.899
gw1.137.65.1
hypothetical protein (442 aa)
     •  0.899
grail3.0003059501
fructose-bisphosphatase (EC-3.1.3.11) (335 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
PLN02323330 PLN02323, PLN02323, probable fructokinase 0.0
cd01167295 cd01167, bac_FRK, Fructokinases (FRKs) mainly from 2e-93
PRK09434304 PRK09434, PRK09434, aminoimidazole riboside kinase 4e-66
cd01166294 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg 1e-59
COG0524311 COG0524, RbsK, Sugar kinases, ribokinase family [C 5e-55
pfam00294298 pfam00294, PfkB, pfkB family carbohydrate kinase 1e-52
PLN02967581 PLN02967, PLN02967, kinase 1e-38
PLN02543496 PLN02543, PLN02543, pfkB-type carbohydrate kinase 2e-37
cd01174292 cd01174, ribokinase, Ribokinase catalyses the phos 7e-35
TIGR02152293 TIGR02152, D_ribokin_bact, ribokinase 3e-30
cd01942279 cd01942, ribokinase_group_A, Ribokinase-like subgr 4e-25
PTZ00292326 PTZ00292, PTZ00292, ribokinase; Provisional 1e-18
cd00287196 cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup 3e-16
PRK11142306 PRK11142, PRK11142, ribokinase; Provisional 7e-16
cd01947265 cd01947, Guanosine_kinase_like, Guanosine kinase-l 2e-15
cd01168312 cd01168, adenosine_kinase, Adenosine kinase (AK) c 4e-14
COG1105310 COG1105, FruK, Fructose-1-phosphate kinase and rel 1e-13
cd01944289 cd01944, YegV_kinase_like, YegV-like sugar kinase 2e-13
cd01172304 cd01172, RfaE_like, RfaE encodes a bifunctional AD 1e-12
TIGR03168303 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki 2e-12
cd01940264 cd01940, Fructoselysine_kinase_like, Fructoselysin 1e-11
cd01945284 cd01945, ribokinase_group_B, Ribokinase-like subgr 2e-11
TIGR03828304 TIGR03828, pfkB, 1-phosphofructokinase 6e-11
cd01164289 cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr 2e-10
PLN02341470 PLN02341, PLN02341, pfkB-type carbohydrate kinase 6e-10
PLN02630335 PLN02630, PLN02630, pfkB-type carbohydrate kinase 4e-09
cd01941288 cd01941, YeiC_kinase_like, YeiC-like sugar kinase 3e-08
PLN02379367 PLN02379, PLN02379, pfkB-type carbohydrate kinase 4e-07
COG2870 467 COG2870, RfaE, ADP-heptose synthase, bifunctional 2e-06
cd01946277 cd01946, ribokinase_group_C, Ribokinase-like subgr 8e-06
cd01937254 cd01937, ribokinase_group_D, Ribokinase-like subgr 3e-05
TIGR02198315 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, 3e-04
PRK09813260 PRK09813, PRK09813, fructoselysine 6-kinase; Provi 0.002
PTZ00247345 PTZ00247, PTZ00247, adenosine kinase; Provisional 0.002
>gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase Back     alignment and domain information 
 Score =  511 bits (1319), Expect = 0.0
 Identities = 194/259 (74%), Positives = 224/259 (86%), Gaps = 2/259 (0%)

Query: 1   MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
           MLA+ILK+N V+  GVR+D  ARTALAFVTLR+DGEREF+F+R+PSADMLL ESELD +L
Sbjct: 74  MLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDL 133

Query: 61  IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 120
           I++  IFHYGSISLI EPCRS  LAAM +AKE+G++LSYDPNLRLPLWPS EAAREGIMS
Sbjct: 134 IRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMS 193

Query: 121 IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 180
           IWD+ADIIKVSD+E+ FLTGGDD +DD VV  KL+HPNLKLL+VTEG +GCRYYTK+FKG
Sbjct: 194 IWDEADIIKVSDEEVEFLTGGDDPDDDTVV--KLWHPNLKLLLVTEGEEGCRYYTKDFKG 251

Query: 181 RVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA 240
           RV G K KAVDTTGAGD+FV G+L+ LA D +L++DE RLREAL FANACGA+T TERGA
Sbjct: 252 RVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTTERGA 311

Query: 241 IPALPTKEAALKLLHTVAA 259
           IPALPTKEA LKLL    A
Sbjct: 312 IPALPTKEAVLKLLKKAVA 330

Length = 330
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|215521 PLN02967, PLN02967, kinase Back     alignment and domain information
>gnl|CDD|215299 PLN02543, PLN02543, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase Back     alignment and domain information
>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases Back     alignment and domain information
>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase Back     alignment and domain information
>gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like Back     alignment and domain information
>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B Back     alignment and domain information
>gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase Back     alignment and domain information
>gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>gnl|CDD|215195 PLN02341, PLN02341, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase Back     alignment and domain information
>gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|225425 COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C Back     alignment and domain information
>gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D Back     alignment and domain information
>gnl|CDD|233776 TIGR02198, rfaE_dom_I, rfaE bifunctional protein, domain I Back     alignment and domain information
>gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional Back     alignment and domain information
>gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 260
PLN02323330 probable fructokinase 100.0
PLN02967581 kinase 100.0
PLN02543496 pfkB-type carbohydrate kinase family protein 100.0
PRK09434304 aminoimidazole riboside kinase; Provisional 100.0
PLN02813426 pfkB-type carbohydrate kinase family protein 100.0
cd01167295 bac_FRK Fructokinases (FRKs) mainly from bacteria 100.0
PTZ00292326 ribokinase; Provisional 100.0
PRK11142306 ribokinase; Provisional 100.0
cd01166294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 100.0
PLN02341470 pfkB-type carbohydrate kinase family protein 100.0
COG0524311 RbsK Sugar kinases, ribokinase family [Carbohydrat 100.0
cd01168312 adenosine_kinase Adenosine kinase (AK) catalyzes t 100.0
PRK15074434 inosine/guanosine kinase; Provisional 100.0
cd01174292 ribokinase Ribokinase catalyses the phosphorylatio 100.0
PLN02379367 pfkB-type carbohydrate kinase family protein 100.0
cd01944289 YegV_kinase_like YegV-like sugar kinase. Found onl 100.0
PTZ00247345 adenosine kinase; Provisional 100.0
PRK09850313 pseudouridine kinase; Provisional 100.0
KOG2855330 consensus Ribokinase [Carbohydrate transport and m 100.0
PF00294301 PfkB: pfkB family carbohydrate kinase; InterPro: I 100.0
TIGR02152293 D_ribokin_bact ribokinase. This model describes ri 100.0
cd01945284 ribokinase_group_B Ribokinase-like subgroup B. Fou 100.0
COG1105310 FruK Fructose-1-phosphate kinase and related fruct 100.0
TIGR03828304 pfkB 1-phosphofructokinase. This enzyme acts in co 100.0
cd01942279 ribokinase_group_A Ribokinase-like subgroup A. Fou 100.0
PRK13508309 tagatose-6-phosphate kinase; Provisional 100.0
PRK10294309 6-phosphofructokinase 2; Provisional 100.0
TIGR03168303 1-PFK hexose kinase, 1-phosphofructokinase family. 100.0
PLN02548332 adenosine kinase 100.0
TIGR01231309 lacC tagatose-6-phosphate kinase. This enzyme is p 100.0
cd01943328 MAK32 MAK32 kinase. MAK32 is a protein found prima 100.0
PRK09513312 fruK 1-phosphofructokinase; Provisional 100.0
PRK09954362 putative kinase; Provisional 100.0
cd01940264 Fructoselysine_kinase_like Fructoselysine kinase-l 100.0
TIGR02198315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 100.0
cd01172304 RfaE_like RfaE encodes a bifunctional ADP-heptose 100.0
cd01939290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 99.98
cd01164289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 99.98
cd01947265 Guanosine_kinase_like Guanosine kinase-like sugar 99.97
PRK09813260 fructoselysine 6-kinase; Provisional 99.97
cd01941288 YeiC_kinase_like YeiC-like sugar kinase. Found in 99.97
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 99.97
PLN02630335 pfkB-type carbohydrate kinase family protein 99.96
cd01946277 ribokinase_group_C Ribokinase-like subgroup C. Fou 99.96
cd01937254 ribokinase_group_D Ribokinase-like subgroup D. Fou 99.95
KOG2854343 consensus Possible pfkB family carbohydrate kinase 99.95
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 99.9
KOG2947308 consensus Carbohydrate kinase [Carbohydrate transp 99.89
cd01173254 pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla 99.88
PRK05756286 pyridoxamine kinase; Validated 99.88
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.87
PRK07105284 pyridoxamine kinase; Validated 99.87
TIGR00687286 pyridox_kin pyridoxal kinase. ThiD and related pro 99.86
TIGR00097254 HMP-P_kinase phosphomethylpyrimidine kinase. This 99.86
PRK12412268 pyridoxal kinase; Reviewed 99.86
PRK12413253 phosphomethylpyrimidine kinase; Provisional 99.86
PRK08176281 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy 99.85
cd01169242 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim 99.85
PRK06427266 bifunctional hydroxy-methylpyrimidine kinase/ hydr 99.84
PRK08573 448 phosphomethylpyrimidine kinase; Provisional 99.83
PRK12616270 pyridoxal kinase; Reviewed 99.81
PTZ00344296 pyridoxal kinase; Provisional 99.75
PLN02898 502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 99.73
PTZ00347504 phosphomethylpyrimidine kinase; Provisional 99.71
PLN02978308 pyridoxal kinase 99.68
PRK14713 530 multifunctional hydroxymethylpyrimidine phosphokin 99.66
PF08543246 Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte 99.66
COG0351263 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi 99.65
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 99.64
cd01171254 YXKO-related B.subtilis YXKO protein of unknown fu 99.62
cd01170242 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T 99.61
COG2240281 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe 99.57
TIGR00196272 yjeF_cterm yjeF C-terminal region, hydroxyethylthi 99.54
PTZ00493321 phosphomethylpyrimidine kinase; Provisional 99.45
PRK09355263 hydroxyethylthiazole kinase; Validated 99.36
TIGR00694249 thiM hydroxyethylthiazole kinase. This model repre 99.31
KOG2598 523 consensus Phosphomethylpyrimidine kinase [Coenzyme 99.14
KOG2599308 consensus Pyridoxal/pyridoxine/pyridoxamine kinase 99.02
KOG3009614 consensus Predicted carbohydrate kinase, contains 98.97
PF02110246 HK: Hydroxyethylthiazole kinase family; InterPro: 98.4
PRK10565508 putative carbohydrate kinase; Provisional 98.22
PF01256242 Carb_kinase: Carbohydrate kinase; InterPro: IPR000 98.12
COG2145265 ThiM Hydroxyethylthiazole kinase, sugar kinase fam 98.11
KOG3974306 consensus Predicted sugar kinase [Carbohydrate tra 97.58
COG0063284 Predicted sugar kinase [Carbohydrate transport and 97.41
PRK03979463 ADP-specific phosphofructokinase; Provisional 97.24
PF04587444 ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco 96.83
PRK14039453 ADP-dependent glucokinase; Provisional 96.81
TIGR02045446 P_fruct_ADP ADP-specific phosphofructokinase. Phos 96.66
PRK14038453 ADP-dependent glucokinase; Provisional 96.43
cd01938445 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and 86.9
PRK10076213 pyruvate formate lyase II activase; Provisional 85.28
COG1180260 PflA Pyruvate-formate lyase-activating enzyme [Pos 82.42
>PLN02323 probable fructokinase Back     alignment and domain information 
Probab=100.00  E-value=1.4e-40  Score=282.04  Aligned_cols=255  Identities=75%  Similarity=1.207  Sum_probs=217.7

Q ss_pred             CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908            1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR   80 (260)
Q Consensus         1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~   80 (260)
                      ++++.|++.||+++++.+.++.+|+.+++..+++|+|++++++..+++..++.++++...+++++++|++++.+..+.+.
T Consensus        74 ~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (330)
T PLN02323         74 MLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDLIRKAKIFHYGSISLITEPCR  153 (330)
T ss_pred             HHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChHHHccCCEEEEechhccCchHH
Confidence            47899999999999999888889999999988899999988765566667788888777888999999988776655555


Q ss_pred             HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908           81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK  160 (260)
Q Consensus        81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~  160 (260)
                      .....+++.+++.|.++++||+.+...|.+.....+.+.++++++|++++|.+|+..++|....+... +. .++..|++
T Consensus       154 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~~~~~~-~~-~~~~~g~~  231 (330)
T PLN02323        154 SAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDT-VV-KLWHPNLK  231 (330)
T ss_pred             HHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCccHHH-HH-HHHhcCCC
Confidence            67778899999999999999998888887666677788889999999999999999999876543222 22 45557999


Q ss_pred             EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcCC
Q 024908          161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERGA  240 (260)
Q Consensus       161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g~  240 (260)
                      .||||+|++|++++.++..+++|+++++++||+||||+|+|||++++++|++...+..++++++++|+++|++++++.|+
T Consensus       232 ~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~Aa~~v~~~g~  311 (330)
T PLN02323        232 LLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTTERGA  311 (330)
T ss_pred             EEEEecCCCceEEEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHhccCC
Confidence            99999999999999888777889888899999999999999999999999753223345899999999999999999999


Q ss_pred             CCCCCCHHHHHHHHhhc
Q 024908          241 IPALPTKEAALKLLHTV  257 (260)
Q Consensus       241 ~~~~~~~~~l~~~~~~~  257 (260)
                      ..++|+.+++++++++.
T Consensus       312 ~~~~~~~~~v~~~l~~~  328 (330)
T PLN02323        312 IPALPTKEAVLKLLKKA  328 (330)
T ss_pred             ccCCCCHHHHHHHHHHh
Confidence            88899999999988764

>PLN02967 kinase Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>PTZ00292 ribokinase; Provisional Back     alignment and domain information
>PRK11142 ribokinase; Provisional Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP Back     alignment and domain information
>PRK05756 pyridoxamine kinase; Validated Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>PRK07105 pyridoxamine kinase; Validated Back     alignment and domain information
>TIGR00687 pyridox_kin pyridoxal kinase Back     alignment and domain information
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase Back     alignment and domain information
>PRK12412 pyridoxal kinase; Reviewed Back     alignment and domain information
>PRK12413 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed Back     alignment and domain information
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 Back     alignment and domain information
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed Back     alignment and domain information
>PRK08573 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK12616 pyridoxal kinase; Reviewed Back     alignment and domain information
>PTZ00344 pyridoxal kinase; Provisional Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>PTZ00347 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PLN02978 pyridoxal kinase Back     alignment and domain information
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional Back     alignment and domain information
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 Back     alignment and domain information
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>cd01171 YXKO-related B Back     alignment and domain information
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz Back     alignment and domain information
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] Back     alignment and domain information
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related Back     alignment and domain information
>PTZ00493 phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK09355 hydroxyethylthiazole kinase; Validated Back     alignment and domain information
>TIGR00694 thiM hydroxyethylthiazole kinase Back     alignment and domain information
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] Back     alignment and domain information
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] Back     alignment and domain information
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] Back     alignment and domain information
>PRK10565 putative carbohydrate kinase; Provisional Back     alignment and domain information
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase Back     alignment and domain information
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] Back     alignment and domain information
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03979 ADP-specific phosphofructokinase; Provisional Back     alignment and domain information
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase Back     alignment and domain information
>PRK14038 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) Back     alignment and domain information
>PRK10076 pyruvate formate lyase II activase; Provisional Back     alignment and domain information
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
3ljs_A338 Crystal Structure Of Fructokinase From Xylella Fast 2e-32
1tz6_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 5e-31
1tyy_A339 Crystal Structure Of Aminoimidazole Riboside Kinase 6e-30
3hj6_A327 Structure Of Halothermothrix Orenii Fructokinase (F 9e-25
3iq0_A330 Crystal Structure Of A Putative Ribokinase Ii In Co 1e-21
3ewm_A313 Crystal Structure Of An Uncharacterized Sugar Kinas 1e-17
2qcv_A332 Crystal Structure Of A Putative 5-Dehydro-2-Deoxygl 3e-17
3gbu_A313 Crystal Structure Of An Uncharacterized Sugar Kinas 2e-16
2v78_A313 Crystal Structure Of Sulfolobus Solfataricus 2-Keto 2e-14
2dcn_A311 Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase 8e-13
4du5_A336 Crystal Structure Of Pfkb Protein From Polaromonas 9e-13
4e69_A328 Crystal Structure Of A Sugar Kinase (Target Efi-502 5e-11
3lhx_A319 Crystal Structure Of A Ketodeoxygluconokinase (Kdgk 1e-10
1v19_A309 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop 2e-10
3ry7_A304 Crystal Sructure Of Sa239 Length = 304 3e-10
1rk2_A309 E. Coli Ribokinase Complexed With Ribose And Adp, S 7e-10
3pl2_A319 Crystal Structure Of A 5-Keto-2-Deoxygluconokinase 3e-09
1vm7_A311 Crystal Structure Of Ribokinase (Tm0960) From Therm 7e-09
3h49_A325 Crystal Structure Of A Putative Ribokinase (Apo For 6e-08
2c49_A302 Crystal Structure Of Methanocaldococcus Jannaschii 2e-07
2fv7_A331 Crystal Structure Of Human Ribokinase Length = 331 2e-07
2qhp_A296 Crystal Structure Of Fructokinase (Np_810670.1) Fro 5e-06
3kd6_A313 Crystal Structure Of Nucleoside Kinase From Chlorob 6e-04
>pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa Length = 338 Back     alignment and structure 
Iteration: 1

 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 124/262 (47%), Gaps = 8/262 (3%)
Query: 1   MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
            L +   E  V T G+   STA+TALAFV L A GER F F+R P+AD+L          
Sbjct: 67  FLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDAS 126
Query: 61  IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 120
                IFH  S S                A+ +G+I+S+D N R  LWP+ E     +  
Sbjct: 127 FSDALIFHACSNSXTDADIAEVTFEGXRRAQAAGAIVSFDLNFRPXLWPNGENPASRLWK 186
Query: 121 IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 180
               AD++K+S +E+ +L       D N V+++L+    +LL+VT+ +    +YT+   G
Sbjct: 187 GLSLADVVKLSSEELDYLA-NTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGG 245
Query: 181 RVPGVKTKAVDTTGAGDSFVSGILNCL-------AADQNLIKDENRLREALLFANACGAL 233
            VP  + +  D+  AGD+FV G L          AA  +   D   +   L FA A GAL
Sbjct: 246 EVPTFRVQVQDSNAAGDAFVGGXLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGAL 305
Query: 234 TVTERGAIPALPTKEAALKLLH 255
            VT +GA  A P     L L+ 
Sbjct: 306 AVTRQGAFTAXPXLSEVLSLIQ 327
>pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 Back     alignment and structure
>pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 Back     alignment and structure
>pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk) Length = 327 Back     alignment and structure
>pdb|3IQ0|A Chain A, Crystal Structure Of A Putative Ribokinase Ii In Complex With Atp And Mg+2 From E.Coli Length = 330 Back     alignment and structure
>pdb|3EWM|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii Length = 313 Back     alignment and structure
>pdb|2QCV|A Chain A, Crystal Structure Of A Putative 5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus Halodurans C-125 At 1.90 A Resolution Length = 332 Back     alignment and structure
>pdb|3GBU|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase Ph1459 From Pyrococcus Horikoshii In Complex With Atp Length = 313 Back     alignment and structure
>pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3- Deoxygluconate Kinase Length = 313 Back     alignment and structure
>pdb|2DCN|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From Sulfolobus Tokodaii Complexed With 2-Keto-6-Phosphogluconate (Alpha-Furanose Form) Length = 311 Back     alignment and structure
>pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 Back     alignment and structure
>pdb|4E69|A Chain A, Crystal Structure Of A Sugar Kinase (Target Efi-502132) From Oceanicola Granulosus, Unliganded Structure Length = 328 Back     alignment and structure
>pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 Back     alignment and structure
>pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 Back     alignment and structure
>pdb|3RY7|A Chain A, Crystal Sructure Of Sa239 Length = 304 Back     alignment and structure
>pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 Back     alignment and structure
>pdb|3PL2|A Chain A, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase (Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.89 A Resolution Length = 319 Back     alignment and structure
>pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 Back     alignment and structure
>pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 Back     alignment and structure
>pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 Back     alignment and structure
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 Back     alignment and structure
>pdb|2QHP|A Chain A, Crystal Structure Of Fructokinase (Np_810670.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 1.80 A Resolution Length = 296 Back     alignment and structure
>pdb|3KD6|A Chain A, Crystal Structure Of Nucleoside Kinase From Chlorobium Tepidum In Complex With Amp Length = 313 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query260
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 1e-119
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 1e-115
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 1e-114
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 1e-112
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 1e-111
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 1e-109
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 1e-103
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 1e-102
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 2e-99
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 3e-99
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 7e-99
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 2e-96
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 4e-96
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 7e-94
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 3e-89
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 3e-67
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 2e-63
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 2e-47
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 3e-42
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 1e-39
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 8e-39
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 1e-38
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 2e-38
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 5e-38
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 6e-38
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 2e-37
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 4e-36
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 2e-35
3bf5_A306 Ribokinase related protein; 10640157, putative rib 4e-35
2fv7_A331 Ribokinase; structural genomics, structural genomi 6e-34
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 1e-32
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 4e-32
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 1e-30
4e3a_A352 Sugar kinase protein; structural genomics, protein 6e-18
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 3e-14
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 4e-14
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 6e-14
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 1e-13
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 4e-13
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 4e-13
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 5e-13
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 1e-12
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 2e-12
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 3e-12
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 1e-08
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure
 Score =  343 bits (882), Expect = e-119
 Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 1   MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
            L +   E  V T G+   STA+TALAFV L A GER F F+R P+AD+L          
Sbjct: 67  FLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDAS 126

Query: 61  IKQGSIFHYGSISLIAEPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMS 120
                IFH  S S+            M  A+ +G+I+S+D N R  LWP+ E     +  
Sbjct: 127 FSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWK 186

Query: 121 IWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLKLLIVTEGSKGCRYYTKEFKG 180
               AD++K+S +E+ +L       D N V+++L+    +LL+VT+ +    +YT+   G
Sbjct: 187 GLSLADVVKLSSEELDYLANTLA-ADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGG 245

Query: 181 RVPGVKTKAVDTTGAGDSFVSGILNCLAAD-------QNLIKDENRLREALLFANACGAL 233
            VP  + +  D+  AGD+FV G+L   A          +   D   +   L FA A GAL
Sbjct: 246 EVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGAL 305

Query: 234 TVTERGAIPALPTKEAALKLL 254
            VT +GA  A+P     L L+
Sbjct: 306 AVTRQGAFTAMPMLSEVLSLI 326
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
3ljs_A338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 100.0
3iq0_A330 Putative ribokinase II; transferase,kinase,SAD,rib 100.0
2qcv_A332 Putative 5-dehydro-2-deoxygluconokinase; structura 100.0
3pl2_A319 Sugar kinase, ribokinase family; PFKB PFAM motif, 100.0
4du5_A336 PFKB; structural genomics, PSI-biology, NEW YORK s 100.0
1tyy_A339 Putative sugar kinase; ribokinase fold, alpha/beta 100.0
3hj6_A327 Fructokinase, FRK; fructose, transferase, carbohyd 100.0
2v78_A313 Fructokinase; transferase, PFKB family carbohydrat 100.0
3ktn_A346 Carbohydrate kinase, PFKB family; PFKB family,ribo 100.0
2dcn_A311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 100.0
1v1a_A309 2-keto-3-deoxygluconate kinase; ATP, structural ge 100.0
3h49_A325 Ribokinase; transferase,PFKB family,sugar kinase Y 100.0
4e3a_A352 Sugar kinase protein; structural genomics, protein 100.0
4e69_A328 2-dehydro-3-deoxygluconokinase; putative sugar kin 100.0
3ewm_A313 Uncharacterized sugar kinase PH1459; carbohydrate 100.0
3lhx_A319 Ketodeoxygluconokinase; structural genomics, PSI-2 100.0
3ry7_A304 Ribokinase; transferase; 2.15A {Staphylococcus aur 100.0
2rbc_A343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 100.0
1rkd_A309 Ribokinase; carbohydrate kinase, ribose, nucleotid 100.0
3kzh_A328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 100.0
2afb_A351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 100.0
2c4e_A302 Sugar kinase MJ0406; transferase, nucleoside kinas 100.0
4gm6_A351 PFKB family carbohydrate kinase; enzyme function i 100.0
3go6_A310 Ribokinase RBSK; phosphofructokinase, carbohydrate 100.0
3vas_A370 Putative adenosine kinase; ribokinase, enzyme, tra 100.0
2nwh_A317 AGR_C_3442P, carbohydrate kinase; structural genom 100.0
3ikh_A299 Carbohydrate kinase; transferase,kinase,SAD,ribose 100.0
3b1n_A326 Ribokinase, putative; rossmann fold, ATP binding, 100.0
2pkf_A334 Adenosine kinase; transferase, S genomics, TB stru 100.0
2qhp_A296 Fructokinase; NP_810670.1, PFKB family carbohydrat 100.0
3loo_A365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 100.0
3otx_A347 Adenosine kinase, putative; AP5A, transferase-tran 100.0
2jg1_A330 Tagatose-6-phosphate kinase; phosphoryl transfer, 100.0
3ie7_A320 LIN2199 protein; phosphofructokinases, transferase 100.0
2fv7_A331 Ribokinase; structural genomics, structural genomi 100.0
1vm7_A311 Ribokinase; TM0960, structural genomics, JCSG, pro 100.0
3umo_A309 6-phosphofructokinase isozyme 2; glycolysis, trans 100.0
2f02_A323 Tagatose-6-phosphate kinase; LACC, structural geno 100.0
3uq6_A372 Adenosine kinase, putative; ribokinase, transferas 100.0
2abq_A306 Fructose 1-phosphate kinase; dimer, structural gen 100.0
3cqd_A309 6-phosphofructokinase isozyme 2; phosphofructokina 100.0
1bx4_A345 Protein (adenosine kinase); human adenosine kinase 100.0
2jg5_A306 Fructose 1-phosphate kinase; 1-phosphofructokinase 100.0
2ajr_A331 Sugar kinase, PFKB family; TM0828, possible 1-phos 100.0
4e84_A352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 100.0
3bf5_A306 Ribokinase related protein; 10640157, putative rib 100.0
2abs_A383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 100.0
3kd6_A313 Carbohydrate kinase, PFKB family; nucleoside kinas 100.0
2hlz_A312 Ketohexokinase; non-protein kinase, creatine kinas 100.0
1vk4_A298 PFKB carbohydrate kinase TM0415; structural genomi 99.98
2ddm_A283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 99.95
2yxt_A312 Pyridoxal kinase; beta sheet with alpha helix, met 99.93
1jxh_A288 Phosphomethylpyrimidine kinase; THID, ribokinase f 99.91
1ub0_A258 THID, phosphomethylpyrimidine kinase; thiamin bios 99.91
2i5b_A271 Phosphomethylpyrimidine kinase; ADP complex, PDXK, 99.89
3pzs_A289 PM kinase, pyridoxamine kinase; structural genomic 99.89
3mbh_A291 Putative phosphomethylpyrimidine kinase; structura 99.89
3h74_A282 Pyridoxal kinase; PSI-II, structural genomics, pro 99.88
3zs7_A300 Pyridoxal kinase; transferase, sleeping sickness; 99.85
1ekq_A272 Hydroxyethylthiazole kinase; alpha-beta, transfera 99.73
3rm5_A 550 Hydroxymethylpyrimidine/phosphomethylpyrimidine K 99.72
1v8a_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 99.42
3bgk_A311 SMU.573, putative uncharacterized protein; alpha/b 99.31
2r3b_A310 YJEF-related protein; putative kinase in the ribok 99.31
3dzv_A273 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ 99.25
3rpz_A279 ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str 99.09
3rss_A502 Putative uncharacterized protein; unknown function 99.01
3nl6_A540 Thiamine biosynthetic bifunctional enzyme; thiamin 98.78
3hpd_A265 Hydroxyethylthiazole kinase; alpha-beta, ATP bindi 98.68
3k5w_A475 Carbohydrate kinase; 11206B,helicobacter pylori,PS 98.08
3drw_A474 ADP-specific phosphofructokinase; AMP, GLYC kinase 98.06
1ua4_A455 Glucokinase, ADP-dependent glucokinase; transferas 97.61
1l2l_A457 ADP-dependent glucokinase; ADP glucokinase APO, tr 97.15
1gc5_A467 ADP-dependent glucokinase; ALFA/beta sandwichs, in 96.51
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-43  Score=300.36  Aligned_cols=250  Identities=34%  Similarity=0.562  Sum_probs=210.9

Q ss_pred             CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccCCCchhH
Q 024908            1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISLIAEPCR   80 (260)
Q Consensus         1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~   80 (260)
                      ++++.|++.||+++++.+.++.+|+.+++.++++|+|++.+++..+++..+++++++...+++++++|++++.+..+.+.
T Consensus        67 ~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  146 (338)
T 3ljs_A           67 FLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIA  146 (338)
T ss_dssp             HHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHH
T ss_pred             HHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHH
Confidence            36889999999999998888889999999999899999988876778878888888877889999999999888888888


Q ss_pred             HHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCCe
Q 024908           81 STQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNLK  160 (260)
Q Consensus        81 ~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~~  160 (260)
                      +.+..+++.+++.|.++++||+.+..+|.+.......+.++++++|++++|.+|++.|+|..+.++ ..+++.|++.|++
T Consensus       147 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~-~~~~~~l~~~g~~  225 (338)
T 3ljs_A          147 EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADA-NAVIQQLWQGRAQ  225 (338)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCH-HHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhH-HHHHHHHHhcCCC
Confidence            999999999999999999999999888876555677888899999999999999999998765443 2266888889999


Q ss_pred             EEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhc--------------CcccccHHHHHHHHHH
Q 024908          161 LLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAAD--------------QNLIKDENRLREALLF  226 (260)
Q Consensus       161 ~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g--------------~~~~~~~~~~~~a~~~  226 (260)
                      .|+||+|++|++++.++..+++|+++++++|||||||+|+|||+++|++|              ++       +++|+++
T Consensus       226 ~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~~al~~  298 (338)
T 3ljs_A          226 LLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IVSTLRF  298 (338)
T ss_dssp             EEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HHHHHHH
T ss_pred             EEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HHHHHHH
Confidence            99999999999999998899999999999999999999999999999999              67       9999999


Q ss_pred             HHHHhhHHhhhcCCCCCCCCHHHHHHHHhhcc
Q 024908          227 ANACGALTVTERGAIPALPTKEAALKLLHTVA  258 (260)
Q Consensus       227 a~~~Aa~~~~~~g~~~~~~~~~~l~~~~~~~~  258 (260)
                      |+++|+.+|++.|+.+++|+++++++++++..
T Consensus       299 A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~~~  330 (338)
T 3ljs_A          299 AAAVGALAVTRQGAFTAMPMLSEVLSLIQEQS  330 (338)
T ss_dssp             HHHHHGGGC----CCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCCCHHHHHHHHhhhc
Confidence            99999999999999989999999999998764
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* Back     alignment and structure
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 Back     alignment and structure
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} Back     alignment and structure
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* Back     alignment and structure
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* Back     alignment and structure
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* Back     alignment and structure
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} Back     alignment and structure
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Back     alignment and structure
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} Back     alignment and structure
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A Back     alignment and structure
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} Back     alignment and structure
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A Back     alignment and structure
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Back     alignment and structure
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A Back     alignment and structure
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} Back     alignment and structure
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 Back     alignment and structure
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 Back     alignment and structure
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 260
d2afba1333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 1e-26
d1rkda_306 c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 2e-26
d1tyya_304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 5e-26
d1vm7a_299 c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax 2e-24
d1v19a_302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 4e-24
d2fv7a1308 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien 9e-22
d1vk4a_288 c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot 6e-21
d2dcna1308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 2e-19
d1bx4a_342 c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien 4e-19
d2absa1350 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g 5e-18
d2ajra1319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 2e-17
d2f02a1313 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac 5e-16
d2abqa1306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 4e-15
d1vi9a_288 c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col 2e-05
d1lhpa_309 c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) 0.002
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermotoga maritima, TM0067 [TaxId: 2336]

 Score =  103 bits (257), Expect = 1e-26
 Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 30/270 (11%)

Query: 1   MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNL 60
             A  L++  V T  +                +    + ++ R  SA       + D   
Sbjct: 66  AAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEK 125

Query: 61  IKQGSIFHYGSISLIA--EPCRSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGI 118
           I  G+ + + S       +        A+ +A E G +             ++E A++ +
Sbjct: 126 ILDGARWFHFSGITPPLGKELPLILEDALKVANEKG-VTVSCDLNYRARLWTKEEAQKVM 184

Query: 119 MSIWDQADIIKVSDDEITFLTGGDDHNDDN------------VVLEKLFHPNLKLLIVT- 165
           +   +  D++  ++++I  + G      D             +  E     N K + +T 
Sbjct: 185 IPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITL 244

Query: 166 -------EGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDEN 218
                          +           +   VD  GAGDSF   ++       +      
Sbjct: 245 RESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD------ 298

Query: 219 RLREALLFANACGALTVTERGAIPALPTKE 248
             ++   FA A   L  T  G    L  +E
Sbjct: 299 -SQKKAEFAAAASCLKHTIPGDFVVLSIEE 327
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query260
d1v19a_302 2-keto-3-deoxygluconate kinase {Thermus thermophil 100.0
d1tyya_304 Aminoimidazole riboside kinase {Salmonella typhimu 100.0
d2f02a1313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 100.0
d2afba1333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 100.0
d2dcna1308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 100.0
d2abqa1306 Fructose 1-phosphate kinase FruB {Bacillus halodur 99.98
d1vm7a_299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 99.98
d1rkda_306 Ribokinase {Escherichia coli [TaxId: 562]} 99.97
d2ajra1319 Putative sugar kinase TM0828 {Thermotoga maritima 99.97
d1bx4a_342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 99.97
d2fv7a1308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 99.96
d2absa1350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 99.96
d1vk4a_288 Hypothetical protein TM0415 {Thermotoga maritima [ 99.9
d1vi9a_288 Pyridoxamine kinase {Escherichia coli [TaxId: 562] 99.79
d1ub0a_258 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.66
d1jxha_266 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha 99.62
d1lhpa_309 Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] 99.6
d1ekqa_269 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba 99.12
d1v8aa_264 Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar 98.87
d1kyha_275 Hypothetical protein YxkO {Bacillus subtilis [TaxI 98.68
d2ax3a1278 Hypothetical protein TM0922, C-terminal domain {Th 98.17
d1u2xa_450 ADP-specific phosphofructokinase {Pyrococcus horik 97.46
d1gc5a_467 ADP-dependent glucokinase {Archaeon Thermococcus l 97.09
d1l2la_451 ADP-dependent glucokinase {Archaeon Thermococcus l 97.0
d1ua4a_454 ADP-dependent glucokinase {Archaeon Pyrococcus fur 96.92
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.9e-34  Score=236.18  Aligned_cols=238  Identities=26%  Similarity=0.357  Sum_probs=200.5

Q ss_pred             CHHHHHHHCCCCCCceEEcCCCCceEEEEEEccCCceeEEEeeCCcccccccccccchhhhcCccEEEEccccC-CCchh
Q 024908            1 MLANILKENNVDTSGVRYDSTARTALAFVTLRADGEREFLFFRHPSADMLLCESELDKNLIKQGSIFHYGSISL-IAEPC   79 (260)
Q Consensus         1 ~i~~~l~~~gi~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~   79 (260)
                      ++++.|++.||++.++...+. +++.+++.+..+|++++...........++.+......+++.++++.+.+.. ..+..
T Consensus        64 ~i~~~l~~~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  142 (302)
T d1v19a_          64 MVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEA  142 (302)
T ss_dssp             HHHHHHHHHTCBCTTEEEESS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETHHHHHCHHH
T ss_pred             cchhhhhhcccccchhccccc-cccccchhhccccccccccccccccchhhccccccHHHHhcccEEeeeccccccchhH
Confidence            368899999999999877765 5666667778889988887765566666677777778889999999876654 34445


Q ss_pred             HHHHHHHHHHHHHCCCeEEEcCCCCCCCCCCHHHHHHHHHHHhhhCCEEecCHHHHhhhcCCCCCCchHHHHHHhcCCCC
Q 024908           80 RSTQLAAMNLAKESGSILSYDPNLRLPLWPSEEAAREGIMSIWDQADIIKVSDDEITFLTGGDDHNDDNVVLEKLFHPNL  159 (260)
Q Consensus        80 ~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~g~~~~~~~~~~~~~l~~~g~  159 (260)
                      .+....+++..++.++.+.+|++.+...+. .......+...++++|++++|++|+....+...        +.+...+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~~--------~~~~~~~~  213 (302)
T d1v19a_         143 RAFSLWAMEEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRVE--------EALRALSA  213 (302)
T ss_dssp             HHHHHHHHHHHHTTTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSTT--------HHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCccccccchhhhccc-hhhhHHHHHhhhhhccchhhhhhhhhhhhhhhh--------hhhhhccc
Confidence            577888899999999999999987766553 445566778889999999999999988776532        23444788


Q ss_pred             eEEEEecCCCceEEEecCceeeecCcccccccCCCCchHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHhhHHhhhcC
Q 024908          160 KLLIVTEGSKGCRYYTKEFKGRVPGVKTKAVDTTGAGDSFVSGILNCLAADQNLIKDENRLREALLFANACGALTVTERG  239 (260)
Q Consensus       160 ~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGDaf~Ag~~~~l~~g~~~~~~~~~~~~a~~~a~~~Aa~~~~~~g  239 (260)
                      +.+|||+|.+|++++.+++.+++|+++++++|||||||+|+|||++++++|++       +++|+++|+++||.++++.|
T Consensus       214 ~~viit~G~~G~~~~~~~~~~~~p~~~v~vvDttGAGDaf~a~~~~~~~~g~~-------~~~a~~~a~~~Aa~~v~~~G  286 (302)
T d1v19a_         214 PEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAASRG  286 (302)
T ss_dssp             SEEEEECTTSCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSS
T ss_pred             eEEEEecCCCCCccccccccccccccccccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999999       99999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHh
Q 024908          240 AIPALPTKEAALKLLH  255 (260)
Q Consensus       240 ~~~~~~~~~~l~~~~~  255 (260)
                      +.+++|+.+|++++|+
T Consensus       287 ~~~~~p~~~~i~~~l~  302 (302)
T d1v19a_         287 DHEGAPYREDLEVLLK  302 (302)
T ss_dssp             SSTTCCCHHHHHHCC-
T ss_pred             CCCCCCCHHHHHHHhC
Confidence            9999999999998764
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure