Citrus Sinensis ID: 024937

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Protein Sequence
MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAFFTCTDDSNRRAC
Secondary Structure (PSIPRED)
cccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccEEEHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccHHEHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccHHHHHHHHHHHHHHHccccccccEEEEEccEEEEEEEccccccccc
Coil and Loop (DISEMBL)
MRHEEQarslfgvslsdrprwqQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGfttkqmvnpwKTYVKLSAVLMgshgltkgslaflnypaqimfKSTKVLPVMIMgafipglrrkypAHEYVAALLLVFGLILFTmadaqtspnfsLIGVLMISGALVMDSFLGNLQEViftvnpdttqvikHPLQLAYEYKNNLSQKCIFFLLLLISNisltdgdavLLYSSWFAFftctddsnrrac
Flexible Loop (DISEMBL)
mrheeqarslfgvslsdrprWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAfftctddsnrrac
Low Complexity Region (SEG)
MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCiffllllisnislTDGDAVLLYSSWFAFFTCTDDSNRRAC
Disordered region (IsUnstruct)
**********FGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAFFTCT********
Disordered Region (DISOPRED)
******A****GVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM********FSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAFFTCTDDSNRRAC
Disordered Region (DISEMBL)
*********LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAFFTCTDDSNRRAC
Disordered Region (DISPRO)
*****QARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAFFTCTDD******
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDGDAVLLYSSWFAFFTCTDDSNRRAC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	260	2.2.26 [Sep-21-2011]
Q29Q28	345	UDP-galactose/UDP-glucose	yes	no	0.765	0.576	0.839	1e-100
Q9LDX3	349	UDP-galactose/UDP-glucose	no	no	0.761	0.567	0.838	3e-99
Q5R831	401	Adenosine 3'-phospho 5'-p	yes	no	0.773	0.501	0.381	2e-32
Q9H1N7	401	Adenosine 3'-phospho 5'-p	yes	no	0.773	0.501	0.381	6e-32
Q922Q5	369	Adenosine 3'-phospho 5'-p	no	no	0.773	0.544	0.386	6e-32
Q17CE7	382	Adenosine 3'-phospho 5'-p	N/A	no	0.634	0.431	0.415	1e-28
Q7Q5D4	377	Adenosine 3'-phospho 5'-p	yes	no	0.703	0.485	0.384	3e-28
Q61LC0	363	Adenosine 3'-phospho 5'-p	N/A	no	0.715	0.512	0.347	5e-28
Q9VVD9	396	Adenosine 3'-phospho 5'-p	yes	no	0.646	0.424	0.383	3e-27
Q20787	364	Adenosine 3'-phospho 5'-p	yes	no	0.715	0.510	0.336	3e-27

>sp|Q29Q28|UTR2_ARATH UDP-galactose/UDP-glucose transporter 2 OS=Arabidopsis thaliana GN=UTR2 PE=2 SV=1

 Score =  365 bits (936), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 167/199 (83%), Positives = 188/199 (94%)

Query: 3   HEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQG 62
            EEQ RSLFG+SLSD+P WQQFLIC+SGFFFGYLVNG+CEEYVYNRLQFS+GWYFTF+QG
Sbjct: 2   KEEQTRSLFGISLSDKPTWQQFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQG 61

Query: 63  FVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLP 122
           FVYL LIYLQGFTTK +VNP +TYVKLSAVLMGSHGLTKGSLA+LNYPAQIMFKSTKVLP
Sbjct: 62  FVYLFLIYLQGFTTKHIVNPMRTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLP 121

Query: 123 VMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDS 182
           VMIMGAFIPGLRRKYP HEY++A LLV GLILFT+ADAQ SPNFS+IG++MI+GAL+MD+
Sbjct: 122 VMIMGAFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMSPNFSMIGIMMITGALIMDA 181

Query: 183 FLGNLQEVIFTVNPDTTQV 201
           FLGNLQE IFT+NP+TTQ+
Sbjct: 182 FLGNLQEAIFTMNPETTQM 200

Sugar transporter involved in the transport of UDP-galactose form the cytoplasm into the Golgi apparatus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDX3|UTR4_ARATH UDP-galactose/UDP-glucose transporter 4 OS=Arabidopsis thaliana GN=UTR4 PE=2 SV=1

 Score =  361 bits (927), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 166/198 (83%), Positives = 184/198 (92%)

Query: 4   EEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGF 63
           EEQ   LFG+ LSD+PRWQQFLICSSGFFFGYLVNGICEEYVYNRL+FSYGWYFTF QG 
Sbjct: 6   EEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFAQGL 65

Query: 64  VYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPV 123
           VY+ LIY+ GF TKQMVNPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQIMFKSTKVLPV
Sbjct: 66  VYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPV 125

Query: 124 MIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSF 183
           M+MGAFIPGLRRKYP HEY++A+LLV GLILFT+ADA TSPNFS+IGV+MISGAL+MD+F
Sbjct: 126 MVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIMDAF 185

Query: 184 LGNLQEVIFTVNPDTTQV 201
           LGNLQE IFT+NP+TTQ+
Sbjct: 186 LGNLQEAIFTMNPETTQM 203

Sugar transporter involved in the transport of nucleotide-sugars from cytoplasm into the Golgi and/or the endoplasmic reticulum.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5R831|S35B3_PONAB Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Pongo abelii GN=SLC35B3 PE=2 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 126/207 (60%), Gaps = 6/207 (2%)

Query: 10  LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQF-SYGWYFTFVQGFVYLV- 67
           + G++LS   +  QF IC +G F  YL+ G  +E +++   F SYGWY T VQ   Y + 
Sbjct: 67  VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSYGWYLTLVQFAFYSIF 126

Query: 68  -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
            LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 127 GLIELQPIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query: 127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
           G FI G  ++Y   +  AA+ +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct: 187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTIAPNFNLTGVVLISLALCADAVIGN 244

Query: 187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
           +QE    + N   ++++ +   + + Y
Sbjct: 245 VQEKAMKLHNASNSEMVLYSYSIGFVY 271

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Pongo abelii (taxid: 9601)

>sp|Q9H1N7|S35B3_HUMAN Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Homo sapiens GN=SLC35B3 PE=1 SV=1

 Score =  137 bits (346), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 126/207 (60%), Gaps = 6/207 (2%)

Query: 10  LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQF-SYGWYFTFVQGFVYLV- 67
           + G++LS   +  QF IC +G F  YL+ G  +E +++   F S GWY T VQ   Y + 
Sbjct: 67  VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQFAFYSIF 126

Query: 68  -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
            LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 127 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query: 127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
           G FI G  ++Y   +  AA+ +  GLI FT+AD+ T+PNF+L GV++IS AL  D+ +GN
Sbjct: 187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGN 244

Query: 187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
           +QE    + N   ++++ +   + + Y
Sbjct: 245 VQEKAMKLHNASNSEMVLYSYSIGFVY 271

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Homo sapiens (taxid: 9606)

>sp|Q922Q5|S35B3_MOUSE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Mus musculus GN=Slc35b3 PE=2 SV=1

 Score =  137 bits (346), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 126/207 (60%), Gaps = 6/207 (2%)

Query: 10  LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLV- 67
           + GV+LS   +  QFLIC +G F  YL+ G  +E +++   F  YGWY T VQ   Y V 
Sbjct: 35  VLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVF 94

Query: 68  -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
            LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct: 95  GLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query: 127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
           G FI G  ++Y   +  AA+ +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct: 155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query: 187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
           +QE    + N   ++++ +   + + Y
Sbjct: 213 VQEKAMKLHNASNSEMVLYSYSIGFVY 239

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Compensates for the insufficient expression of SLC35B2/PAPST1 during the synthesis of sulfated glycoconjugates in the colon.

Mus musculus (taxid: 10090)

>sp|Q17CE7|S35B3_AEDAE Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Aedes aegypti GN=Papst2 PE=3 SV=1

 Score =  126 bits (317), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 23  QFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIYLQGFTTKQMVN 81
           +FL+C +G F  YL+ G  +E ++    F  YGW+ T VQ   Y V  Y++     + V 
Sbjct: 53  KFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTLVQFAYYTVFGYVERSLESKRVP 112

Query: 82  ---PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYP 138
              P KTYV L+ + +G+ GL+  SL +LNYP Q++FK  K++PV+I    I G  +K+ 
Sbjct: 113 RCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFKCCKLVPVLIGSILIQG--KKHG 170

Query: 139 AHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQE 189
             +++AA+ +  GL LFT+AD+Q SPNF+  GVL+IS AL+ D+ +GN+QE
Sbjct: 171 PLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISLALLCDAAIGNVQE 221

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Aedes aegypti (taxid: 7159)

>sp|Q7Q5D4|S35B3_ANOGA Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Anopheles gambiae GN=Papst2 PE=3 SV=4

 Score =  125 bits (314), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 7/190 (3%)

Query: 4   EEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQG 62
           E + + LF   L+   R  QFL+C  G F  YLV G  +E ++    F  YGWY T VQ 
Sbjct: 29  EREIKILF-FDLTHYNRTTQFLLCCGGVFALYLVYGYMQELIFTLEGFRPYGWYLTLVQF 87

Query: 63  FVYLVLIYLQGFTTKQMVN---PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTK 119
             Y    Y++    +  V    P +TY  L+ + +G+ GL+  S+ +LNYP Q++FK  K
Sbjct: 88  AYYTAFGYIERSVERTTVPRCIPLRTYALLAFLTLGTMGLSNSSVGYLNYPTQVIFKCCK 147

Query: 120 VLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALV 179
           ++PV+I    I G  +K+   ++ AA  +  GLILFT+AD+Q  P+F+  GV +IS AL+
Sbjct: 148 LIPVLIGSVLIQG--KKHGPMDFFAATAMCLGLILFTLADSQVQPDFNRFGVFLISLALL 205

Query: 180 MDSFLGNLQE 189
            D+ +GN+QE
Sbjct: 206 CDAAIGNVQE 215

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Anopheles gambiae (taxid: 7165)

>sp|Q61LC0|S35B3_CAEBR Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Caenorhabditis briggsae GN=pst-2 PE=3 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 114/193 (59%), Gaps = 7/193 (3%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTF 59
           ++ + +   L G +++ +P+W QF++ S   F  YL  G  +E ++       +GW  T 
Sbjct: 19  IKDDVEPIHLLGFNIARKPKWLQFVLLSGAIFILYLGYGYMQELIFKLPGMKPFGWTLTL 78

Query: 60  VQGFVYLVLIYLQG---FTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFK 116
           +Q  +Y    Y +      TK+M+ PW+ Y  ++   + + GL+  S+ +LNYP Q++FK
Sbjct: 79  IQFVIYSGCGYAECAVWHNTKRMI-PWRIYGVIAFFTVATMGLSNASVGYLNYPTQVIFK 137

Query: 117 STKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISG 176
             K++PV+I G  I G  ++Y   +  AA+L+  G+I+FT+AD + SPNF   G +MISG
Sbjct: 138 CCKLIPVLIGGILIQG--KRYGWIDISAAILMSLGIIMFTLADNKVSPNFDSRGYIMISG 195

Query: 177 ALVMDSFLGNLQE 189
           AL+ D+ +GN+QE
Sbjct: 196 ALLADAVIGNIQE 208

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q9VVD9|S35B3_DROME Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Drosophila melanogaster GN=Papst2 PE=1 SV=2

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 17/185 (9%)

Query: 20  RWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVY----LVLIYLQGF 74
           R  QFL+  +G FF Y++ G  +E ++    F  YGW+ T VQ   Y    LV   L+G+
Sbjct: 58  RTTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYGWFLTLVQFGYYIGFGLVERRLEGY 117

Query: 75  ----------TTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVM 124
                       +    P +TY+ L+A+ +G+ GL+  SL +LNYP Q++FK  K++PV+
Sbjct: 118 RISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCCKLIPVL 177

Query: 125 IMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFL 184
           +    I G  ++Y   ++ AA  +  GL  FT+AD+Q +PNF+L+GV MISGAL+ D+ +
Sbjct: 178 VGSILIQG--KRYGLLDFAAATCMCIGLAWFTLADSQMTPNFNLLGVAMISGALLCDAAI 235

Query: 185 GNLQE 189
           GN+QE
Sbjct: 236 GNVQE 240

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).

Drosophila melanogaster (taxid: 7227)

>sp|Q20787|S35B3_CAEEL Adenosine 3'-phospho 5'-phosphosulfate transporter 2 OS=Caenorhabditis elegans GN=pst-2 PE=3 SV=1

 Score =  122 bits (305), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 113/193 (58%), Gaps = 7/193 (3%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTF 59
           ++ + +   L G +++ +P+W QF++ S   F  Y+  G  +E ++       +GW  T 
Sbjct: 19  VKEDVEPIHLLGFNIARKPKWLQFVLLSLAIFILYIGYGYMQELIFKLPGMKPFGWTLTL 78

Query: 60  VQGFVYLVLIYLQGF---TTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFK 116
           +Q  +Y    Y +      TK+M+ PW+ Y  ++   + + GL+  S+ +LNYP Q++FK
Sbjct: 79  IQFLIYSGCGYTECIIWHNTKRMI-PWRIYGVIAFFTVATMGLSNASVGYLNYPTQVIFK 137

Query: 117 STKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISG 176
             K++PV+I G  I G  ++Y   +  AA+L+  G+I+FT+AD + SPNF   G +MI G
Sbjct: 138 CCKLIPVLIGGILIQG--KRYGWIDIGAAMLMSLGIIMFTLADNKVSPNFDSRGYIMICG 195

Query: 177 ALVMDSFLGNLQE 189
           AL+ D+ +GN+QE
Sbjct: 196 ALLADAVIGNIQE 208

Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
225453883	348	PREDICTED: adenosine 3'-phospho 5'-phosp	0.773	0.577	0.915	1e-107
356532052	371	PREDICTED: adenosine 3'-phospho 5'-phosp	0.780	0.547	0.906	1e-106
356568334	371	PREDICTED: adenosine 3'-phospho 5'-phosp	0.780	0.547	0.906	1e-106
356532050	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.773	0.561	0.910	1e-106
356568332	358	PREDICTED: adenosine 3'-phospho 5'-phosp	0.773	0.561	0.910	1e-106
224053981	370	predicted protein [Populus trichocarpa]	0.776	0.545	0.896	1e-105
225426765	350	PREDICTED: adenosine 3'-phospho 5'-phosp	0.773	0.574	0.900	1e-104
255537267	348	Adenosine 3'-phospho 5'-phosphosulfate t	0.773	0.577	0.885	1e-103
224127530	359	predicted protein [Populus trichocarpa]	0.773	0.559	0.875	1e-103
357507121	360	Adenosine 3'-phospho 5'-phosphosulfate t	0.773	0.558	0.880	1e-103

>gi|225453883|ref|XP_002273090.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|296089139|emb|CBI38842.3| unnamed protein product [Vitis vinifera]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/201 (91%), Positives = 197/201 (98%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M++EEQARSLFG+SLSDRP+WQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV
Sbjct: 1   MKNEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYLVLIY QGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKV
Sbjct: 61  QGFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVM+MGAFIPGLRRKYPAHEYV+A+LLV GLILFT+ADA TSPNFS+IGVLM+SGALVM
Sbjct: 121 LPVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFSVIGVLMVSGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           DSFLGNLQE IFT+NPDTTQ+
Sbjct: 181 DSFLGNLQEAIFTLNPDTTQM 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532052|ref|XP_003534588.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/203 (90%), Positives = 196/203 (96%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M++EEQARSLFG+SLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRL FSYGWYFTFV
Sbjct: 1   MKNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYLQGFT+KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QGFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEY++A+LLV GLILFT+ADAQTSPNFS+IGV+MISGALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQVIK 203
           DSFLGNLQE IFT+NP+TTQ  K
Sbjct: 181 DSFLGNLQEAIFTMNPETTQPYK 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568334|ref|XP_003552366.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 2 [Glycine max]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/203 (90%), Positives = 196/203 (96%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M++EEQARSLFG+SLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRL FSYGWYFTFV
Sbjct: 1   MKNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYLQGFT+KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QGFVYLFLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEY++A+LLV GLILFT+ADAQTSPNFS+IGV+MISGALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQVIK 203
           DSFLGNLQE IFT+NP+TTQ  K
Sbjct: 181 DSFLGNLQEAIFTMNPETTQPYK 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532050|ref|XP_003534587.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/201 (91%), Positives = 196/201 (97%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M++EEQARSLFG+SLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRL FSYGWYFTFV
Sbjct: 1   MKNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYLQGFT+KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QGFVYLCLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEY++A+LLV GLILFT+ADAQTSPNFS+IGV+MISGALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           DSFLGNLQE IFT+NP+TTQ+
Sbjct: 181 DSFLGNLQEAIFTMNPETTQM 201

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568332|ref|XP_003552365.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2-like isoform 1 [Glycine max]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 183/201 (91%), Positives = 196/201 (97%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M++EEQARSLFG+SLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRL FSYGWYFTFV
Sbjct: 1   MKNEEQARSLFGISLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYLQGFT+KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QGFVYLFLIYLQGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEY++A+LLV GLILFT+ADAQTSPNFS+IGV+MISGALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPLHEYISAILLVVGLILFTLADAQTSPNFSMIGVIMISGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           DSFLGNLQE IFT+NP+TTQ+
Sbjct: 181 DSFLGNLQEAIFTMNPETTQM 201

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053981|ref|XP_002298069.1| predicted protein [Populus trichocarpa] gi|222845327|gb|EEE82874.1| predicted protein [Populus trichocarpa]

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/202 (89%), Positives = 195/202 (96%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M+ E+QARSLFG+SLSDRP+WQQFLICSSGFFFGYL+NG+CEEYVYNRLQFSYGWYFTFV
Sbjct: 1   MKGEDQARSLFGISLSDRPKWQQFLICSSGFFFGYLINGVCEEYVYNRLQFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYLVLIYLQGFT KQMVNPWKTY KLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QGFVYLVLIYLQGFTPKQMVNPWKTYWKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVM+MGAFIPGLRRKYP HEY++ALLLV GLILFT+ADAQTSPNFS+IGVLMISGAL+M
Sbjct: 121 LPVMVMGAFIPGLRRKYPFHEYISALLLVIGLILFTLADAQTSPNFSIIGVLMISGALIM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQVI 202
           DS +GNLQE IFT+NPDTTQVI
Sbjct: 181 DSLMGNLQEAIFTMNPDTTQVI 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426765|ref|XP_002282676.1| PREDICTED: adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Vitis vinifera] gi|297742604|emb|CBI34753.3| unnamed protein product [Vitis vinifera]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 181/201 (90%), Positives = 194/201 (96%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M+ EEQARSLFG+SLSDRP+WQQFLICSSGFFFGYL+NGICEEYVYNRL+FSYGWYFTF+
Sbjct: 1   MKGEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLINGICEEYVYNRLKFSYGWYFTFI 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYLQGFTTKQM NPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQ+MFKSTKV
Sbjct: 61  QGFVYLALIYLQGFTTKQMSNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEYV+A+LLV GLILFT+ADAQTSPNFS IGVLMISGALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPFHEYVSAVLLVVGLILFTLADAQTSPNFSSIGVLMISGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           DSFLGNLQE IFT+NP+TTQ+
Sbjct: 181 DSFLGNLQEAIFTMNPETTQM 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537267|ref|XP_002509700.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis] gi|223549599|gb|EEF51087.1| Adenosine 3'-phospho 5'-phosphosulfate transporter, putative [Ricinus communis]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/201 (88%), Positives = 193/201 (96%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M+ E+Q+RSLFG+SLSDRP WQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV
Sbjct: 1   MKGEDQSRSLFGISLSDRPLWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYLVLIY QGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLA+LNYPAQIMFKSTKV
Sbjct: 61  QGFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEY++ALLLV GLILFT+ADAQTSPNFS+IGV+MI GAL+M
Sbjct: 121 LPVMIMGAFIPGLRRKYPFHEYISALLLVVGLILFTLADAQTSPNFSMIGVIMICGALIM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           DS +GNLQE IFT+NP+TTQ+
Sbjct: 181 DSLMGNLQEAIFTMNPETTQI 201

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127530|ref|XP_002320097.1| predicted protein [Populus trichocarpa] gi|222860870|gb|EEE98412.1| predicted protein [Populus trichocarpa]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/201 (87%), Positives = 195/201 (97%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M++EEQ RSLFG+SL+DRPRW+QFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV
Sbjct: 1   MKNEEQERSLFGISLTDRPRWKQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           Q FVY++LIYLQGFT KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QSFVYVLLIYLQGFTPKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVM+MGAFIPGLRRKYPAHEY +ALLLV GLI+FT+ADA+TSPNFS+IGVLMISGAL+M
Sbjct: 121 LPVMVMGAFIPGLRRKYPAHEYASALLLVAGLIIFTLADAKTSPNFSIIGVLMISGALIM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           D+FLGNLQE IFT++P+TTQ+
Sbjct: 181 DAFLGNLQEAIFTLSPETTQM 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357507121|ref|XP_003623849.1| Adenosine 3'-phospho 5'-phosphosulfate transporter [Medicago truncatula] gi|124360233|gb|ABN08246.1| Solute carrier family 35 member B3, related [Medicago truncatula] gi|355498864|gb|AES80067.1| Adenosine 3'-phospho 5'-phosphosulfate transporter [Medicago truncatula]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/201 (88%), Positives = 192/201 (95%)

Query: 1   MRHEEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFV 60
           M+ EEQ RSLFG+SLSD+PRWQQFLICSSGFFFGYLVNGICEEYVYNRL FSYGWYFTF+
Sbjct: 1   MKKEEQGRSLFGISLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLHFSYGWYFTFI 60

Query: 61  QGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120
           QGFVYL LIYL GFT+KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV
Sbjct: 61  QGFVYLFLIYLNGFTSKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 120

Query: 121 LPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVM 180
           LPVMIMGAFIPGLRRKYP HEY++A+LLV GLILFT+ADA TSPNFS++GV+MI+GALVM
Sbjct: 121 LPVMIMGAFIPGLRRKYPIHEYISAILLVVGLILFTLADAHTSPNFSVVGVVMITGALVM 180

Query: 181 DSFLGNLQEVIFTVNPDTTQV 201
           DSFLGNLQE IFT+NPDTTQ+
Sbjct: 181 DSFLGNLQEAIFTMNPDTTQM 201

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
TAIR|locus:2195032	349	AT1G12600 "AT1G12600" [Arabido	0.761	0.567	0.838	1.3e-91
UNIPROTKB|F1RV99	369	SLC35B3 "Uncharacterized prote	0.773	0.544	0.381	1.2e-33
RGD|1307183	369	Slc35b3 "solute carrier family	0.773	0.544	0.391	1.2e-33
UNIPROTKB|E2RJI8	369	SLC35B3 "Uncharacterized prote	0.773	0.544	0.381	1.5e-33
UNIPROTKB|E1BLS0	430	SLC35B3 "Uncharacterized prote	0.773	0.467	0.381	2.5e-33
MGI|MGI:1913978	369	Slc35b3 "solute carrier family	0.773	0.544	0.386	2.5e-33
UNIPROTKB|F1P4W7	387	SLC35B3 "Uncharacterized prote	0.769	0.516	0.394	4.1e-33
UNIPROTKB|Q9H1N7	401	SLC35B3 "Adenosine 3'-phospho	0.773	0.501	0.381	5.2e-33
ZFIN|ZDB-GENE-060312-46	386	slc35b3 "solute carrier family	0.788	0.531	0.386	8.5e-33
UNIPROTKB|Q17CE7	382	Papst2 "Adenosine 3'-phospho 5	0.634	0.431	0.415	1.8e-30

TAIR|locus:2195032 AT1G12600 "AT1G12600" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 166/198 (83%), Positives = 184/198 (92%)

Query:     4 EEQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGF 63
             EEQ   LFG+ LSD+PRWQQFLICSSGFFFGYLVNGICEEYVYNRL+FSYGWYFTF QG 
Sbjct:     6 EEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFAQGL 65

Query:    64 VYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPV 123
             VY+ LIY+ GF TKQMVNPWKTYVKLS VLMGSHGLTKGSLA+LNYPAQIMFKSTKVLPV
Sbjct:    66 VYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPV 125

Query:   124 MIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSF 183
             M+MGAFIPGLRRKYP HEY++A+LLV GLILFT+ADA TSPNFS+IGV+MISGAL+MD+F
Sbjct:   126 MVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIMDAF 185

Query:   184 LGNLQEVIFTVNPDTTQV 201
             LGNLQE IFT+NP+TTQ+
Sbjct:   186 LGNLQEAIFTMNPETTQM 203

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1RV99 SLC35B3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 79/207 (38%), Positives = 125/207 (60%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLV- 67
             + G++LS   +  QF IC +G F  YL+ G  +E +++   F  YGWY T VQ   Y + 
Sbjct:    35 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSIF 94

Query:    68 -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
             G FI G  ++Y   +  AAL +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTGVILISLALCADAVIGN 212

Query:   187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             +QE    + N   ++++ +   + + Y
Sbjct:   213 VQEKAMKLHNASNSEMVLYSYSIGFVY 239

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

RGD|1307183 Slc35b3 "solute carrier family 35, member B3" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 81/207 (39%), Positives = 126/207 (60%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLV- 67
             + GV+LS   +  QFLIC +G F  YL+ G  +E +++   F  YGWY T VQ   Y V 
Sbjct:    35 VLGVNLSRFKKLTQFLICVAGVFVFYLIYGYLQELIFSMEGFKPYGWYLTLVQFAFYSVF 94

Query:    68 -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLTQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
             G FI G  ++Y   +  AA+ +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query:   187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             +QE    + N   ++++ +   + + Y
Sbjct:   213 VQEKAMKLHNASNSEMVLYSYSIGFVY 239

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|E2RJI8 SLC35B3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 79/207 (38%), Positives = 126/207 (60%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQF-SYGWYFTFVQGFVYLV- 67
             + G++LS   +  QF IC +G F  YL+ G  +E +++   F SYGWY T VQ   Y + 
Sbjct:    35 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSMEGFKSYGWYLTLVQFAFYSIF 94

Query:    68 -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
             G FI G  ++Y   +  AA+ +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNIADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVILISLALCADAVIGN 212

Query:   187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             +QE    + N   ++++ +   + + Y
Sbjct:   213 VQEKAMKLHNASNSEMVLYSYSIGFVY 239

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|E1BLS0 SLC35B3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 79/207 (38%), Positives = 125/207 (60%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLV- 67
             + G++LS   +  QF IC +G F  YL+ G  +E +++   F  YGWY T VQ   Y + 
Sbjct:    96 VLGINLSRFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSIF 155

Query:    68 -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:   156 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 215

Query:   127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
             G FI G  ++Y   +  AAL +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct:   216 GVFIQG--KRYNVADVSAALCMSLGLIWFTLADSTVAPNFNLTGVVLISLALCADAVIGN 273

Query:   187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             +QE    + N   ++++ +   + + Y
Sbjct:   274 VQEKAMKLHNASNSEMVLYSYSIGFVY 300

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

MGI|MGI:1913978 Slc35b3 "solute carrier family 35, member B3" [Mus musculus (taxid:10090)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 80/207 (38%), Positives = 126/207 (60%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLV- 67
             + GV+LS   +  QFLIC +G F  YL+ G  +E +++   F  YGWY T VQ   Y V 
Sbjct:    35 VLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVF 94

Query:    68 -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
              LI LQ    ++   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:    95 GLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 154

Query:   127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
             G FI G  ++Y   +  AA+ +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +GN
Sbjct:   155 GVFIQG--KRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGN 212

Query:   187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             +QE    + N   ++++ +   + + Y
Sbjct:   213 VQEKAMKLHNASNSEMVLYSYSIGFVY 239

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1P4W7 SLC35B3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 82/208 (39%), Positives = 127/208 (61%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQ-GFVYLV 67
             + G++LS   +  QF IC SG F  YL+ G  +E +++   F  +GWY T VQ GF Y V
Sbjct:    53 VLGINLSKFNKPAQFFICVSGVFMFYLIYGYLQELIFSVEGFKPFGWYLTLVQFGF-YSV 111

Query:    68 --LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMI 125
               LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+
Sbjct:   112 FGLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMV 171

Query:   126 MGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLG 185
              G FI G  ++Y   +  AAL +  GLI FT+AD+  +PNF+L GV++IS AL  D+ +G
Sbjct:   172 GGVFIQG--KRYNIADVSAALCMSLGLIWFTLADSTVAPNFNLTGVVLISLALCADAVIG 229

Query:   186 NLQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             N+QE    + N   ++++ +   + + Y
Sbjct:   230 NVQEKAMKLHNGSNSEMVLYSYSIGFLY 257

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q9H1N7 SLC35B3 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Homo sapiens (taxid:9606)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 79/207 (38%), Positives = 126/207 (60%)

Query:    10 LFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQF-SYGWYFTFVQGFVYLV- 67
             + G++LS   +  QF IC +G F  YL+ G  +E +++   F S GWY T VQ   Y + 
Sbjct:    67 VLGMNLSKFNKLTQFFICVAGVFVFYLIYGYLQELIFSVEGFKSCGWYLTLVQFAFYSIF 126

Query:    68 -LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIM 126
              LI LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++PVM+ 
Sbjct:   127 GLIELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLG 186

Query:   127 GAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGN 186
             G FI G  ++Y   +  AA+ +  GLI FT+AD+ T+PNF+L GV++IS AL  D+ +GN
Sbjct:   187 GVFIQG--KRYNVADVSAAICMSLGLIWFTLADSTTAPNFNLTGVVLISLALCADAVIGN 244

Query:   187 LQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             +QE    + N   ++++ +   + + Y
Sbjct:   245 VQEKAMKLHNASNSEMVLYSYSIGFVY 271

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

ZFIN|ZDB-GENE-060312-46 slc35b3 "solute carrier family 35, member B3" [Danio rerio (taxid:7955)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 82/212 (38%), Positives = 129/212 (60%)

Query:     5 EQARSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQ-G 62
             E+ R L G++L+      QF IC +G F  YL+ G  +E +++   F  +GWY T VQ G
Sbjct:    48 EELRVL-GINLNSFNTPTQFFICVAGVFLFYLIYGYLQELIFSVEGFKPFGWYLTLVQFG 106

Query:    63 FVYLV-LIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVL 121
             F  L  L+ LQ    K+   P KTY+ ++ + +G+ GL+  SL +LNYP Q++FK  K++
Sbjct:   107 FYSLFGLVELQLTQDKRRRIPCKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLI 166

Query:   122 PVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMD 181
             PVMI G FI G  ++Y   +  AAL +  GLI FT+AD++ +PNF++ GVL+IS AL  D
Sbjct:   167 PVMIGGVFIQG--KRYNVADVSAALCMSLGLIWFTLADSKIAPNFNVTGVLLISLALCAD 224

Query:   182 SFLGNLQEVIFTV-NPDTTQVIKHPLQLAYEY 212
             + +GN+QE    + N   ++++ +   + + Y
Sbjct:   225 AAIGNVQEKAMKLHNGSNSEMVLYSYSIGFVY 256

GO:0055085 "transmembrane transport" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q17CE7 Papst2 "Adenosine 3'-phospho 5'-phosphosulfate transporter 2" [Aedes aegypti (taxid:7159)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 71/171 (41%), Positives = 110/171 (64%)

Query:    23 QFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIYLQ-GFTTKQMV 80
             +FL+C +G F  YL+ G  +E ++    F  YGW+ T VQ   Y V  Y++    +K++ 
Sbjct:    53 KFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTLVQFAYYTVFGYVERSLESKRVP 112

Query:    81 N--PWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYP 138
                P KTYV L+ + +G+ GL+  SL +LNYP Q++FK  K++PV+I    I G  +K+ 
Sbjct:   113 RCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFKCCKLVPVLIGSILIQG--KKHG 170

Query:   139 AHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQE 189
               +++AA+ +  GL LFT+AD+Q SPNF+  GVL+IS AL+ D+ +GN+QE
Sbjct:   171 PLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISLALLCDAAIGNVQE 221

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0046963 "3'-phosphoadenosine 5'-phosphosulfate transport" evidence=ISS

GO:0046964 "3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29Q28	UTR2_ARATH	No assigned EC number	0.8391	0.7653	0.5768	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026335001 SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (348 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	260
pfam08449	303	pfam08449, UAA, UAA transporter family	9e-49

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score =  162 bits (413), Expect = 9e-49
 Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 21/216 (9%)

Query: 24  FLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIYLQGFTT---KQM 79
           FLIC SG F GY  NG+ +E +  R   S +G   TF Q     ++  L        K  
Sbjct: 1   FLICISGIFGGYCSNGVLQELIMTREYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPR 60

Query: 80  VNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPA 139
             P KTYV + A    S  L   +L +++YP  ++FKS K++PVMI+G  I    ++Y +
Sbjct: 61  KIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILI--YGKRYSS 118

Query: 140 HEYVAALLLVFGLILFTMADAQTSPNFSL------IGVLMISGALVMDSFLGNLQEVIFT 193
            +Y++ALL+  G+I+FT+A A+ S N  L      +G+ ++ GAL+MD+  GN QE ++ 
Sbjct: 119 LQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYK 178

Query: 194 VNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLIS 229
                    KH  ++ + Y + LS    FFLL L+ 
Sbjct: 179 KYG------KHSKEMMF-YSHLLS--LPFFLLGLLD 205

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	260
KOG1582	367	consensus UDP-galactose transporter related protei	100.0
KOG1580	337	consensus UDP-galactose transporter related protei	100.0
KOG1581	327	consensus UDP-galactose transporter related protei	100.0
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	100.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.53
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.51
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.42
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.36
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.31
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.09
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.01
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.97
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.52
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.88
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.68
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.57
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.56
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	97.37
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.22
PLN00411	358	nodulin MtN21 family protein; Provisional	97.15
PRK11689	295	aromatic amino acid exporter; Provisional	97.06
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.04
PRK11272	292	putative DMT superfamily transporter inner membran	97.01
PRK15430	296	putative chloramphenical resistance permease RarD;	96.8
KOG2765	416	consensus Predicted membrane protein [Function unk	96.64
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	96.55
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.5
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	96.1
PRK10532	293	threonine and homoserine efflux system; Provisiona	95.77
KOG3912	372	consensus Predicted integral membrane protein [Gen	95.56
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	94.96
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	94.94
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	94.81
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	93.95
PLN00411	358	nodulin MtN21 family protein; Provisional	93.58
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	93.1
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	92.56
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	92.56
PRK11272	292	putative DMT superfamily transporter inner membran	90.87
KOG2766	336	consensus Predicted membrane protein [Function unk	89.23
PRK09541	110	emrE multidrug efflux protein; Reviewed	89.18
PRK11689	295	aromatic amino acid exporter; Provisional	88.73
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	88.67
PRK10532	293	threonine and homoserine efflux system; Provisiona	87.76
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	85.18
PRK15430	296	putative chloramphenical resistance permease RarD;	84.87
COG2076	106	EmrE Membrane transporters of cations and cationic	83.75
PRK11431	105	multidrug efflux system protein; Provisional	82.9
COG0697	292	RhaT Permeases of the drug/metabolite transporter	82.3
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	81.24

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.4e-54  Score=383.45  Aligned_cols=248  Identities=44%  Similarity=0.784  Sum_probs=225.3

Q ss_pred             ccccc--eeEEeeecCCCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCC-cchHHHHHHHHHHHHHHH--HHhccCC
Q 024937            3 HEEQA--RSLFGVSLSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIY--LQGFTTK   77 (260)
Q Consensus         3 ~~~~~--~~~~g~~~~~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~-~~~~ltf~qfl~~~~~~~--~~~~~~~   77 (260)
                      +||+.  ++++|+++++.|+|.|+++|.+|+|.+|+.||++||.|++.+.|+ +||.+|++|+++++-+.+  .+.++.+
T Consensus        21 s~e~p~ki~llg~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k  100 (367)
T KOG1582|consen   21 SEEQPSKIKLLGFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTK  100 (367)
T ss_pred             cccCCcceeEEeeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccc
Confidence            34444  779999999999999999999999999999999999999999998 899999999999876544  5677889


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937           78 QMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM  157 (260)
Q Consensus        78 ~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~  157 (260)
                      ++.+|+|.|.+++.+..+++.++|.|+.|+|||+|++|||||++|||++|.+++|  |||++.||.++.++++|+++|++
T Consensus       101 ~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqG--kRY~v~d~~aA~lm~lGli~FTL  178 (367)
T KOG1582|consen  101 RRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQG--KRYGVHDYIAAMLMSLGLIWFTL  178 (367)
T ss_pred             ceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeecc--ccccHHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999999999999999999999987  99999999999999999999999


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHHHH-------------
Q 024937          158 ADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFL-------------  224 (260)
Q Consensus       158 ~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~~f-------------  224 (260)
                      +|++.+||++..|+.++..||++||+.|+.||+.++.+      +-..+|.+| |+.-..+|+++..             
T Consensus       179 ADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~------~~ss~Emvf-ySy~iG~vflf~~mvlTge~f~a~~f  251 (367)
T KOG1582|consen  179 ADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMN------PASSSEMVF-YSYGIGFVFLFAPMVLTGELFSAWTF  251 (367)
T ss_pred             cccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhC------CCCcceEEE-eeecccHHHHHHHHHhcccchhhhHH
Confidence            99999999999999999999999999999999999944      334478899 8998899887621             


Q ss_pred             ----------HHHHHHHHhhcCCeEEEEEe--ecCceeEEEeeccccC
Q 024937          225 ----------LLLISNISLTDGDAVLLYSS--WFAFFTCTDDSNRRAC  260 (260)
Q Consensus       225 ----------~~l~~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~~  260 (260)
                                -.+..+..+-+|| +|+-.-  -||+++.+||||-||+
T Consensus       252 caehp~~tyGy~~~~s~~gylG~-~~VLalI~~fGA~~aatvTTaRKa  298 (367)
T KOG1582|consen  252 CAEHPVRTYGYAFLFSLAGYLGI-VFVLALIKLFGALIAATVTTARKA  298 (367)
T ss_pred             HHhCcHhHHHHHHHHHHHhHhhH-HHHHHHHHHhchhHHHHHHHhHhH
Confidence                      2466778888999 777655  9999999999999984

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.3e-52  Score=365.60  Aligned_cols=239  Identities=25%  Similarity=0.375  Sum_probs=197.2

Q ss_pred             CCCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCC----cchHHHHHHHHHHHHH------HH--HH-hccCCCCCCc
Q 024937           16 SDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFS----YGWYFTFVQGFVYLVL------IY--LQ-GFTTKQMVNP   82 (260)
Q Consensus        16 ~~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~----~~~~ltf~qfl~~~~~------~~--~~-~~~~~~~~~P   82 (260)
                      +-+|++.++++|++|||.||..||+.||||.+ .+++    .++.+||++.+++..+      +-  .. ....+.++.|
T Consensus         6 s~lper~rf~ica~GifvCYF~yGI~QEkitr-GkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~   84 (337)
T KOG1580|consen    6 SWLPERGRFLICAGGIFVCYFVYGIQQEKITR-GKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTP   84 (337)
T ss_pred             cccccccceeEEecchhheehhhhhHHHHhhc-cccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCc
Confidence            45788899999999999999999999999984 3332    2455666666555443      21  11 1224567899


Q ss_pred             hHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937           83 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT  162 (260)
Q Consensus        83 ~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~  162 (260)
                      .+.|+.++++|.++|+.+|.|++|+|||||++.|||||||||++|+++  .+|+|+|+||.+|++|.+||++|++.+.+.
T Consensus        85 ~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~--~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen   85 TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLF--AHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhh--hcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            999999999999999999999999999999999999999999999999  799999999999999999999999987665


Q ss_pred             CC---ChhHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCccccccChH--HHHhh-------------hhhcccccHHHH
Q 024937          163 SP---NFSLIGVLMISGALVMDSFLGNLQEVIFTV-NPDTTQVIKHPL--QLAYE-------------YKNNLSQKCIFF  223 (260)
Q Consensus       163 ~~---~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~-~~~~~~~~~~~~--e~lf~-------------y~h~lslp~i~~  223 (260)
                      .+   +...+|-+|+++||.+||++|..|||+.+. ++++.+||.+.|  .++..             ....---|++ +
T Consensus       163 ~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~-~  241 (337)
T KOG1580|consen  163 GGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYV-F  241 (337)
T ss_pred             CCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHH-H
Confidence            32   356789999999999999999999999975 778888888754  11110             1111123433 7


Q ss_pred             HHHHHHHHHhhcCCeEEEEEe--ecCceeEEEeecccc
Q 024937          224 LLLLISNISLTDGDAVLLYSS--WFAFFTCTDDSNRRA  259 (260)
Q Consensus       224 f~~l~~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~  259 (260)
                      .++...++++++|| .|||.|  +||||||++||||||
T Consensus       242 ~~l~l~ai~s~LGQ-~fIF~tv~~FgPLtCSivTTTRK  278 (337)
T KOG1580|consen  242 WDLTLLAIASCLGQ-WFIFKTVEEFGPLTCSIVTTTRK  278 (337)
T ss_pred             HHHHHHHHHHHhhh-HHHHHHHHHhCCeeEEEEeehHH
Confidence            88999999999999 999999  999999999999998

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.9e-51  Score=367.12  Aligned_cols=239  Identities=24%  Similarity=0.390  Sum_probs=199.8

Q ss_pred             CchhHHHHHHHHHHHHHHhHHHHHhhhhhcc------CCCCcchHHHHHHHHHHHHHHH--HHhc-cCCCCCCchHHHHH
Q 024937           18 RPRWQQFLICSSGFFFGYLVNGICEEYVYNR------LQFSYGWYFTFVQGFVYLVLIY--LQGF-TTKQMVNPWKTYVK   88 (260)
Q Consensus        18 ~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~------~~~~~~~~ltf~qfl~~~~~~~--~~~~-~~~~~~~P~~~y~~   88 (260)
                      ..+..++++|++||++.|++||++||+|+++      ++|++..++.|+|.++..++.+  +.++ ...+.+.|+++|..
T Consensus         9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~   88 (327)
T KOG1581|consen    9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSL   88 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhH
Confidence            3456789999999999999999999999863      5688999999999998777654  3332 33567899999999


Q ss_pred             HHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCC----
Q 024937           89 LSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSP----  164 (260)
Q Consensus        89 ~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~----  164 (260)
                      .++++..+.+|+++||||||||+|+++||||+||||++|.++  +|+||+..||+++++|++|+.+|++.++++++    
T Consensus        89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lv--y~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g  166 (327)
T KOG1581|consen   89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLV--YGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSG  166 (327)
T ss_pred             HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHH--hcCccCcHHHHHHHHHHhheeeEEEecCCCCccccC
Confidence            999999999999999999999999999999999999999999  78999999999999999999999998765432    


Q ss_pred             -ChhHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCccccccChHH--HHhhhhhcc-------ccc-----HHHHHHHHH
Q 024937          165 -NFSLIGVLMISGALVMDSFLGNLQEVIFTV-NPDTTQVIKHPLQ--LAYEYKNNL-------SQK-----CIFFLLLLI  228 (260)
Q Consensus       165 -~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~-~~~~~~~~~~~~e--~lf~y~h~l-------slp-----~i~~f~~l~  228 (260)
                       ++.+.|+.|+..+|++||+++++||+++++ +.++.++|...|-  +++.....+       ++.     +-+.+|++.
T Consensus       167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  167 RENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHH
Confidence             367899999999999999999999999984 3345555554331  111111011       111     122689999


Q ss_pred             HHHHhhcCCeEEEEEe--ecCceeEEEeecccc
Q 024937          229 SNISLTDGDAVLLYSS--WFAFFTCTDDSNRRA  259 (260)
Q Consensus       229 ~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~  259 (260)
                      .+.|++.|| .|||+|  +|||+|.+|||||||
T Consensus       247 ~s~~gavGQ-~FI~~TI~~FGslt~t~I~ttRk  278 (327)
T KOG1581|consen  247 YSTCGAVGQ-LFIFYTIERFGSLTFTTIMTTRK  278 (327)
T ss_pred             HHHhhhhhh-heehhhHhhcccHHHHHHHHHHH
Confidence            999999999 999999  999999999999998

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-46  Score=335.85  Aligned_cols=200  Identities=25%  Similarity=0.357  Sum_probs=180.4

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHH--HHHHhccCCCCCCchHHHHHHHHHHHHHHHHhH
Q 024937           24 FLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVL--IYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTK  101 (260)
Q Consensus        24 l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~--~~~~~~~~~~~~~P~~~y~~~s~~~~~~~~~~N  101 (260)
                      -+..++++|+|||+|++..|.+. +.+++.++++||+||++.+..  ++...+...++++|+|.|++++.+|+.++++||
T Consensus         4 a~~ai~~vf~GCcsnvv~lE~L~-~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN   82 (330)
T KOG1583|consen    4 AAAAISLVFGGCCSNVVFLELLV-RNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNN   82 (330)
T ss_pred             HHHHHHHHHHhhhchHHHHHHHH-HhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeecc
Confidence            35678999999999999999998 778999999999999876653  334556667899999999999999999999999


Q ss_pred             HHhhc-cCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCC---------C----C--
Q 024937          102 GSLAF-LNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTS---------P----N--  165 (260)
Q Consensus       102 ~AL~y-Is~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~---------~----~--  165 (260)
                      .||+| |++|+|+++||++++.+|++|+++  .+|||+.+||.+|+++|+|++++++.++++-         .    +  
T Consensus        83 ~al~f~I~~PlHiIfRsgsll~nM~~g~il--~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~  160 (330)
T KOG1583|consen   83 YALKFNIPMPLHIIFRSGSLLANMILGWIL--LGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF  160 (330)
T ss_pred             ceeeecccceEEEEEecCcHHHHHHHHHHh--ccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence            99999 999999999999999999999999  6799999999999999999999999876431         1    1  


Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHHHHHHHHHHHHhhcC
Q 024937          166 FSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFFLLLLISNISLTDG  236 (260)
Q Consensus       166 ~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~~f~~l~~~i~~~~G  236 (260)
                      .|.+|+.+|..|+++++.+|.+||++|+      +||+||+|++| |+|++|||   +|+++..||.++..
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~------kyGKh~~EalF-ytH~LsLP---~Flf~~~div~~~~  221 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQ------KYGKHWKEALF-YTHFLSLP---LFLFMGDDIVSHWR  221 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCChHHHHH-HHHHhccc---hHHHhcchHHHHHH
Confidence            3678999999999999999999999999      89999999999 99999999   99998888887744

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=100.00  E-value=1.5e-45  Score=337.71  Aligned_cols=226  Identities=31%  Similarity=0.555  Sum_probs=200.5

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhhhccCCCC-cchHHHHHHHHHHHHHHHH--Hhc-cCCCCCCchHHHHHHHHHHHHHHHH
Q 024937           24 FLICSSGFFFGYLVNGICEEYVYNRLQFS-YGWYFTFVQGFVYLVLIYL--QGF-TTKQMVNPWKTYVKLSAVLMGSHGL   99 (260)
Q Consensus        24 l~~~~~gIf~~~~~~g~~qE~i~~~~~~~-~~~~ltf~qfl~~~~~~~~--~~~-~~~~~~~P~~~y~~~s~~~~~~~~~   99 (260)
                      +++|++|||++||+||++||+|++++... +++++|++|++++.+..+.  ... ++++++.|+++|+..+.+++.++++
T Consensus         1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (303)
T PF08449_consen    1 FLICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVL   80 (303)
T ss_pred             CEeeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHH
Confidence            35799999999999999999999766666 7999999999987775542  222 3577899999999999999999999


Q ss_pred             hHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCC------hhHHHHHH
Q 024937          100 TKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPN------FSLIGVLM  173 (260)
Q Consensus       100 ~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~------~~~~G~~l  173 (260)
                      +|+||+|+|||+|+++||||++|||++|+++  +||||+.+||++++++++|+++++++|.+++++      .+..|+++
T Consensus        81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~--~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~l  158 (303)
T PF08449_consen   81 SNAALKYISYPTQIVFKSSKPIPVMILGVLI--LGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIIL  158 (303)
T ss_pred             HHHHHHhCChHHHHHHhhhHHHHHHHHHHHh--cCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHH
Confidence            9999999999999999999999999999999  789999999999999999999999998754332      23459999


Q ss_pred             HHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHH------------------------HHHHHHH
Q 024937          174 ISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIF------------------------FLLLLIS  229 (260)
Q Consensus       174 l~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~------------------------~f~~l~~  229 (260)
                      ++.|+++||+++++|||+++      +++.++.|.+| |+|+.++|+..                        ..+++..
T Consensus       159 l~~sl~~~a~~~~~qe~~~~------~~~~~~~~~mf-y~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~  231 (303)
T PF08449_consen  159 LLLSLLLDAFTGVYQEKLFK------KYGKSPWELMF-YTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF  231 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHH------HhCCcHHHHHH-HHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999      78999999999 89999888533                        1335778


Q ss_pred             HHHhhcCCeEEEEEe--ecCceeEEEeecccc
Q 024937          230 NISLTDGDAVLLYSS--WFAFFTCTDDSNRRA  259 (260)
Q Consensus       230 ~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~  259 (260)
                      ++++++|| .++|.+  +|||+++++|+|+||
T Consensus       232 s~~~~~g~-~~i~~~~~~~~al~~t~v~t~Rk  262 (303)
T PF08449_consen  232 SLTGALGQ-FFIFYLIKKFSALTTTIVTTLRK  262 (303)
T ss_pred             HHHHHHHH-HHHHHHHHhcCchhhhhHHHHHH
Confidence            89999999 999998  999999999999998

; GO: 0055085 transmembrane transport

>TIGR00803 nst UDP-galactose transporter

Probab=99.53  E-value=2.6e-15  Score=131.60  Aligned_cols=139  Identities=15%  Similarity=0.214  Sum_probs=110.4

Q ss_pred             cCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC----------------C-------
Q 024937          107 LNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT----------------S-------  163 (260)
Q Consensus       107 Is~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~----------------~-------  163 (260)
                      +++|.|+++||++++|+|+.|+.+  .+|||+..||+++++++.|+....++|.+.                +       
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~--~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~   79 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLA--AGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLM   79 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccc--cceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccc
Confidence            689999999999999999999999  679999999999999999999877765421                0       


Q ss_pred             CChhHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCccccccChHHHHhhhhhcccccHHHH--------------------
Q 024937          164 PNFSLIGVLMISGALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIFF--------------------  223 (260)
Q Consensus       164 ~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~~--------------------  223 (260)
                      .+....|+.+++.++++||+.+.+||+.+|++           |.++ |.|..++|....                    
T Consensus        80 ~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-----------~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  147 (222)
T TIGR00803        80 FGNPVVGLSAVLSALLSSGFAGVYFEKILKDG-----------DTMF-WSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF  147 (222)
T ss_pred             cccHHHHHHHHHHHHHHHhhhHHHHHHcccCC-----------CCch-HHHHHHHHHHHHHHHHHHHhhcccchhhccCc
Confidence            12457899999999999999999999987632           3335 566665552210                    


Q ss_pred             -----HHHHHHHHHhhcCCeEEEEEe--ecCceeEEEeeccccC
Q 024937          224 -----LLLLISNISLTDGDAVLLYSS--WFAFFTCTDDSNRRAC  260 (260)
Q Consensus       224 -----f~~l~~~i~~~~GQ~~fif~t--~Fg~lt~~tvt~tr~~  260 (260)
                           ......-+.++.|| .+|..+  ++|+.+++.++++||.
T Consensus       148 ~~~~~~~~~~~~~~~a~~~-~~v~~vlk~~~~~~~~~~~~~~~~  190 (222)
T TIGR00803       148 FIGYPTAVWIVGLLNVGGG-LCIGGVVRYADNTTKSFVTALSII  190 (222)
T ss_pred             ccCCchHHHHHHHHHHhcC-ceeeehhHHhHHHHHHHHHHHHHH
Confidence                 01233447788999 899999  9999999999999973

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.51  E-value=6.6e-14  Score=127.74  Aligned_cols=173  Identities=17%  Similarity=0.322  Sum_probs=137.2

Q ss_pred             HHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH----HHh--ccCCCCCCchHHHH----HHHHHHHHH
Q 024937           27 CSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY----LQG--FTTKQMVNPWKTYV----KLSAVLMGS   96 (260)
Q Consensus        27 ~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~----~~~--~~~~~~~~P~~~y~----~~s~~~~~~   96 (260)
                      .+.+.|..-+.--++|.+..  .++++|.+++-.|-++--+++.    +..  ..+++.+..|+.|+    ++++...+.
T Consensus        20 lVl~yY~~Si~Ltf~~~~~~--~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~D   97 (349)
T KOG1443|consen   20 LVLLYYFLSIGLTFYFKWLT--KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALD   97 (349)
T ss_pred             HHHHHHHHHHHHHHHhhhhh--cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcc
Confidence            34666666666677777764  3589999998777654323221    211  12234466677777    899999999


Q ss_pred             HHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHH
Q 024937           97 HGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISG  176 (260)
Q Consensus        97 ~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~  176 (260)
                      ..++|++|+||++..+++.||+.++.+.++|.++  .-+|.++.-.+.+.+|.+|+++|++.+.    +++..|+.++..
T Consensus        98 IGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if--~lEk~~w~L~l~v~lI~~Glflft~KsT----qf~i~Gf~lv~~  171 (349)
T KOG1443|consen   98 IGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIF--KLEKFRWALVLIVLLIAVGLFLFTYKST----QFNIEGFFLVLA  171 (349)
T ss_pred             cccccceeeeeeeeeeeeccccHHHHHHHHHHHH--HhHHHHHHHHHHHHHHhhheeEEEeccc----ceeehhHHHHHH
Confidence            9999999999999999999999999999999999  5799999999999999999999999764    578899999999


Q ss_pred             HHHHHHhHHHHHHHHHhcCCCccccccChHHHHh
Q 024937          177 ALVMDSFLGNLQEVIFTVNPDTTQVIKHPLQLAY  210 (260)
Q Consensus       177 sL~~dg~~~~~qe~l~~~~~~~~~~~~~~~e~lf  210 (260)
                      |.+++|+++.+.+.+.+++|..   ..||...++
T Consensus       172 aS~~sGlRW~~tQ~ll~~~~~~---~~~P~~ti~  202 (349)
T KOG1443|consen  172 ASLLSGLRWAFTQMLLRNQPSA---KRNPIDTIF  202 (349)
T ss_pred             HHHhhhhhHHHHHHHHhcCccc---cCCCeeeHH
Confidence            9999999999999999976521   234555555

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.42  E-value=9.2e-12  Score=113.68  Aligned_cols=163  Identities=17%  Similarity=0.167  Sum_probs=130.2

Q ss_pred             HHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHHH--HhccCCCCCC---chHHHHHHHHHHHHHH
Q 024937           23 QFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYL--QGFTTKQMVN---PWKTYVKLSAVLMGSH   97 (260)
Q Consensus        23 ~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~~--~~~~~~~~~~---P~~~y~~~s~~~~~~~   97 (260)
                      +....+...|.....+.+++..+.+  +++.+..+++.|+.+..+....  +....++++.   .++..++.++++....
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   79 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGH   79 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4456677888888888999988873  4788999999998875543322  1111122222   3455667888888889


Q ss_pred             HHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHH
Q 024937           98 GLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGA  177 (260)
Q Consensus        98 ~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~s  177 (260)
                      .++|.+++|+|.+...+.|+..|+.++++++++  +|||++.++++++++..+|+++....+    .+++..|..+.+.|
T Consensus        80 ~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~--~~e~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~a  153 (302)
T TIGR00817        80 VTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFF--LGQEFPSTLWLSLLPIVGGVALASDTE----LSFNWAGFLSAMIS  153 (302)
T ss_pred             HHHHHHHHhccHHHHHHHHhcchHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHhhhcCCc----ccccHHHHHHHHHH
Confidence            999999999999999999999999999999999  789999999999999999998764322    23456799999999


Q ss_pred             HHHHHhHHHHHHHHHh
Q 024937          178 LVMDSFLGNLQEVIFT  193 (260)
Q Consensus       178 L~~dg~~~~~qe~l~~  193 (260)
                      .++-++...+.+|..+
T Consensus       154 ~~~~a~~~v~~k~~~~  169 (302)
T TIGR00817       154 NITFVSRNIFSKKAMT  169 (302)
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            9999999999998776

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.36  E-value=5.4e-11  Score=111.70  Aligned_cols=166  Identities=11%  Similarity=0.116  Sum_probs=135.2

Q ss_pred             hHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHH--HHH-hccCCCCC----CchHHHHHHHHHH
Q 024937           21 WQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLI--YLQ-GFTTKQMV----NPWKTYVKLSAVL   93 (260)
Q Consensus        21 ~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~--~~~-~~~~~~~~----~P~~~y~~~s~~~   93 (260)
                      ..+.+..+..+|..-..+.+....+++  .+++|..++..|+++..++.  .+. +.+++++.    ..+++.+++++++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            467778888888888888888888873  36789999999998865432  222 22222221    2345567888888


Q ss_pred             HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHH
Q 024937           94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLM  173 (260)
Q Consensus        94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~l  173 (260)
                      ......+|.|+++++.+...+.|++.|+.++++++++  ++||++++++++++++++|+++...++    .+++..|+++
T Consensus       125 ~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~--l~ek~s~~~~l~l~l~v~Gv~l~~~~~----~~~~~~G~~~  198 (350)
T PTZ00343        125 LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILF--LKQFLNLYAYLSLIPIVGGVALASVKE----LHFTWLAFWC  198 (350)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHheeccc----chhHHHHHHH
Confidence            8777888999999999999999999999999999999  789999999999999999999988643    2456789999


Q ss_pred             HHHHHHHHHhHHHHHHHHHhc
Q 024937          174 ISGALVMDSFLGNLQEVIFTV  194 (260)
Q Consensus       174 l~~sL~~dg~~~~~qe~l~~~  194 (260)
                      .++|.++.++.+.+.+++.++
T Consensus       199 ~l~s~~~~a~~~i~~k~~~~~  219 (350)
T PTZ00343        199 AMLSNLGSSLRSIFAKKTMKN  219 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999998874

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.31  E-value=5e-12  Score=117.30  Aligned_cols=168  Identities=17%  Similarity=0.250  Sum_probs=142.2

Q ss_pred             hhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH-HHhcc-----CCCCCCchHHHHHHHHHH
Q 024937           20 RWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY-LQGFT-----TKQMVNPWKTYVKLSAVL   93 (260)
Q Consensus        20 ~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~-~~~~~-----~~~~~~P~~~y~~~s~~~   93 (260)
                      +.....++.+-.|.+-...-.+..+++++.+|+++..+|..++.+..+... .+..+     +.+++.|++.-+++++.+
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~   93 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF   93 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence            445566667777777777777888888666889999999988766554322 22111     123567899999999999


Q ss_pred             HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHH
Q 024937           94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLM  173 (260)
Q Consensus        94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~l  173 (260)
                      ..+.+++|.|++|+++.+..+.|+..|+.+.++++++  .+|+|+...|++.+.++.||++++..|    .+++..|+..
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~--~~~~~s~~~~lsL~piv~GV~ias~~e----~~fn~~G~i~  167 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLL--LGKTYSSMTYLSLLPIVFGVAIASVTE----LSFNLFGFIS  167 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHH--hCCCCcceEEEEEEEeeeeEEEeeecc----ccccHHHHHH
Confidence            9999999999999999999999999999999999999  779999999999999999999999966    3688999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHh
Q 024937          174 ISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       174 l~~sL~~dg~~~~~qe~l~~  193 (260)
                      ...+.+..+++.++++++.+
T Consensus       168 a~~s~~~~al~~I~~~~ll~  187 (316)
T KOG1441|consen  168 AMISNLAFALRNILSKKLLT  187 (316)
T ss_pred             HHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999996

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.09  E-value=2e-09  Score=99.14  Aligned_cols=177  Identities=15%  Similarity=0.255  Sum_probs=136.0

Q ss_pred             HHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH-HHhcc----CCCCCCchHHHHHHHHHHHHHHHHhHHHhhcc
Q 024937           33 FGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY-LQGFT----TKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFL  107 (260)
Q Consensus        33 ~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~-~~~~~----~~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yI  107 (260)
                      .+-+.-.+....+.+.-+|+.+.++.+.|.+..++..+ ++..+    ++-+..-.|+|++.++.|.+....+-.+++|+
T Consensus        22 ~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~l  101 (314)
T KOG1444|consen   22 LSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYL  101 (314)
T ss_pred             HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHcccccccc
Confidence            34445556666666555666666666799887665433 22211    11123346779999999999999999999999


Q ss_pred             CchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHH
Q 024937          108 NYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNL  187 (260)
Q Consensus       108 s~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~  187 (260)
                      |+|+.+++|...++-+++....+  +++|.+..-+.++.++-+|.......|.    +++..|+..+..+.+..+....+
T Consensus       102 nVpm~tv~kn~tii~~ai~E~lf--~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY~w~~~n~~~~a~~~v~  175 (314)
T KOG1444|consen  102 NVPMFTVFKNLTIILTAIGEVLF--FGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGYSWALANCLTTAAFVVY  175 (314)
T ss_pred             CchHHHHHhhchHHHHHHhHHhh--cCcCchhhHHHHHHHHHHHHHhhccccc----eecchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999  7899999999999999999888877664    45677999999999999999988


Q ss_pred             HHHHHhcCCCccccccChHHHHhhhhhcccccHHH
Q 024937          188 QEVIFTVNPDTTQVIKHPLQLAYEYKNNLSQKCIF  222 (260)
Q Consensus       188 qe~l~~~~~~~~~~~~~~~e~lf~y~h~lslp~i~  222 (260)
                      -++..+..      +.+-.|.+| |++++++|...
T Consensus       176 ~kk~vd~~------~l~~~~lv~-yNnl~~L~~l~  203 (314)
T KOG1444|consen  176 VKKSVDSA------NLNKFGLVF-YNNLLSLPPLL  203 (314)
T ss_pred             HHHhhccc------cccceeEEe-ehhHHHHHHHH
Confidence            88777632      234456777 88888888443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.01  E-value=1.3e-09  Score=97.98  Aligned_cols=111  Identities=20%  Similarity=0.348  Sum_probs=100.3

Q ss_pred             hHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937           83 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT  162 (260)
Q Consensus        83 ~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~  162 (260)
                      ..++++.+++|...+.+.+.+++|++-++..+.+.+|++.+-++++++  +|||.+.+||++.+++++|+++..+++...
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~--L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLL--LKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHH--HHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            466888999999999999999999999999999999999999999999  899999999999999999999998876543


Q ss_pred             C-------------CChhHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 024937          163 S-------------PNFSLIGVLMISGALVMDSFLGNLQEVIFTVN  195 (260)
Q Consensus       163 ~-------------~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~  195 (260)
                      .             ......|+.+++.+.+++|+-|.+.|+++|++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~  140 (244)
T PF04142_consen   95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS  140 (244)
T ss_pred             cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            1             01356899999999999999999999999954

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.97  E-value=1.7e-08  Score=94.67  Aligned_cols=115  Identities=17%  Similarity=0.321  Sum_probs=105.6

Q ss_pred             CCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhccc
Q 024937           79 MVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA  158 (260)
Q Consensus        79 ~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~  158 (260)
                      .+.|+++|+.++++-+.++.+.+.|++|-|+...++..+...+.+|++++++  +|+||++.|++.+++..+|+++...+
T Consensus        75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~f--L~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIF--LKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHH--HHhhhhHHHHHHHHHHHhhhhheeee
Confidence            4689999999999999999999999999999999999999999999999999  89999999999999999999999998


Q ss_pred             CCCCC-----CChhHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 024937          159 DAQTS-----PNFSLIGVLMISGALVMDSFLGNLQEVIFTVN  195 (260)
Q Consensus       159 ~~~~~-----~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~  195 (260)
                      |..+.     .++...|-++.+.+..+-|+.+++||++.++.
T Consensus       153 D~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~  194 (334)
T PF06027_consen  153 DVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA  194 (334)
T ss_pred             cccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            85432     23568899999999999999999999999853

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.52  E-value=4.5e-07  Score=80.41  Aligned_cols=173  Identities=19%  Similarity=0.262  Sum_probs=117.5

Q ss_pred             HHhhhhhccCCCCcchHHHHHHHHHHHH-HHHHHhccC-CCCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhh
Q 024937           40 ICEEYVYNRLQFSYGWYFTFVQGFVYLV-LIYLQGFTT-KQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKS  117 (260)
Q Consensus        40 ~~qE~i~~~~~~~~~~~ltf~qfl~~~~-~~~~~~~~~-~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS  117 (260)
                      ...+.+.+.++|+-..++-+.|.++.++ +..++..+. +-|....++|.+.+++.......+..||+|+++|.+++||-
T Consensus        23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKN  102 (309)
T COG5070          23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKN  102 (309)
T ss_pred             HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhcc
Confidence            4445555556677666778999987665 222322111 11234567899999999888889999999999999999999


Q ss_pred             ccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCC---ChhHHHHHHHHHHHHHHHhH-HHHHHHHHh
Q 024937          118 TKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSP---NFSLIGVLMISGALVMDSFL-GNLQEVIFT  193 (260)
Q Consensus       118 ~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~---~~~~~G~~ll~~sL~~dg~~-~~~qe~l~~  193 (260)
                      ...|.+-..-.++  +++|-+..+..+-+++.+.-+..+++|.+...   ..---|..-+.....-++.. -.+..|+.-
T Consensus       103 ltII~iAygEvl~--Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~l  180 (309)
T COG5070         103 LTIILIAYGEVLF--FGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKL  180 (309)
T ss_pred             ceeehhHhhHHHH--hcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcc
Confidence            9999999999999  78999999999999999999999999864321   00012443333332222211 112222211


Q ss_pred             cCCCccccccChHHHHhhhhhcccccHHH
Q 024937          194 VNPDTTQVIKHPLQLAYEYKNNLSQKCIF  222 (260)
Q Consensus       194 ~~~~~~~~~~~~~e~lf~y~h~lslp~i~  222 (260)
                      +       .+.-.|++| |++++++|.++
T Consensus       181 t-------Nf~d~dtmf-YnNllslPiL~  201 (309)
T COG5070         181 T-------NFKDFDTMF-YNNLLSLPILL  201 (309)
T ss_pred             c-------ccchhhHHH-HhhhHHHHHHH
Confidence            0       112358999 99999999555

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.88  E-value=0.00025  Score=62.60  Aligned_cols=133  Identities=14%  Similarity=0.072  Sum_probs=99.1

Q ss_pred             chHHHHHHHHHHHHHHH-HHhccCCCCCCchHHHHHHHH-HHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhcc
Q 024937           54 GWYFTFVQGFVYLVLIY-LQGFTTKQMVNPWKTYVKLSA-VLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIP  131 (260)
Q Consensus        54 ~~~ltf~qfl~~~~~~~-~~~~~~~~~~~P~~~y~~~s~-~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~  131 (260)
                      ...+.+..++...++.. ....+  +++..++.+...+. .......+-+.|++|++...-.+..+..|+.+++++.++ 
T Consensus        18 ~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~-   94 (260)
T TIGR00950        18 LYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLM-   94 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHH-
Confidence            34556666554433221 11111  22233444555544 456777888999999999999999999999999999999 


Q ss_pred             ccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937          132 GLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       132 g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~  193 (260)
                       .|+|-+++|+..+++..+|+++....+   +.+.+..|..+.+.+.++-+..+.++.+..+
T Consensus        95 -~~e~~~~~~~~gi~i~~~Gv~li~~~~---~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~  152 (260)
T TIGR00950        95 -GKERPRKLVLLAAVLGLAGAVLLLSDG---NLSINPAGLLLGLGSGISFALGTVLYKRLVK  152 (260)
T ss_pred             -ccCCCcHHHHHHHHHHHHhHHhhccCC---cccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence             789999999999999999998876433   1234568999999999999999999988876

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.68  E-value=9e-05  Score=58.41  Aligned_cols=79  Identities=15%  Similarity=0.224  Sum_probs=66.3

Q ss_pred             CchHHHHHHHHHH-HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937           81 NPWKTYVKLSAVL-MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        81 ~P~~~y~~~s~~~-~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      .|+......+... .....+.++|++|.+ +.-.+..+..|+.++++|.++  +|+|.|.+++++++++.+|+++..+.|
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~--~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF--FKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            4554444445544 377889999999999 777899999999999999999  889999999999999999999999877


Q ss_pred             CCC
Q 024937          160 AQT  162 (260)
Q Consensus       160 ~~~  162 (260)
                      .++
T Consensus       109 ~~~  111 (113)
T PF13536_consen  109 LTG  111 (113)
T ss_pred             ccc
Confidence            543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.57  E-value=0.0035  Score=55.26  Aligned_cols=101  Identities=15%  Similarity=0.149  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhh-hccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChh
Q 024937           89 LSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGA-FIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFS  167 (260)
Q Consensus        89 ~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~-~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~  167 (260)
                      ..........+.+.+++|++.....+..+..|+.+.+++. ++  ++||-+++++..+++..+|+++....+...... .
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-~  152 (292)
T COG0697          76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLL--LGERLSLLQILGILLALAGVLLILLGGGGGGIL-S  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH--ccCCCcHHHHHHHHHHHHhHHheecCCCcchhH-H
Confidence            3455667778888899999999999999999999999996 66  589999999999999999999988766433222 5


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHH
Q 024937          168 LIGVLMISGALVMDSFLGNLQEVIF  192 (260)
Q Consensus       168 ~~G~~ll~~sL~~dg~~~~~qe~l~  192 (260)
                      ..|..+.+.+.++.++....+++..
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            7899999999999999999999876

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.56  E-value=0.00038  Score=65.37  Aligned_cols=110  Identities=20%  Similarity=0.250  Sum_probs=94.9

Q ss_pred             hHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCC-
Q 024937           83 WKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQ-  161 (260)
Q Consensus        83 ~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~-  161 (260)
                      ..+..+.++.|..-+-+...++.+++=.+.++.=--|...+-++.+++  ++||-+++||.+.++.++|+++--+...+ 
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~--L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~  169 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLI--LRRKLSRLQWMALVLLFAGVALVQLPSLSP  169 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            444667788898888888899999998899999999999999999999  99999999999999999999998844322 


Q ss_pred             --CC----CChhHHHHHHHHHHHHHHHhHHHHHHHHHhc
Q 024937          162 --TS----PNFSLIGVLMISGALVMDSFLGNLQEVIFTV  194 (260)
Q Consensus       162 --~~----~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~  194 (260)
                        +.    ..+...|+..+..+.+.+|+.|++-|++.|+
T Consensus       170 ~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~  208 (345)
T KOG2234|consen  170 TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG  208 (345)
T ss_pred             CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              11    1256789999999999999999999999984

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=97.37  E-value=0.00044  Score=53.42  Aligned_cols=115  Identities=12%  Similarity=0.119  Sum_probs=80.2

Q ss_pred             hHHHHHhhhhhccCCCCcchHHHHHHHHHHHH-HHH--HHhccCCCCCCch---HHHHHHHHH-HHHHHHHhHHHhhccC
Q 024937           36 LVNGICEEYVYNRLQFSYGWYFTFVQGFVYLV-LIY--LQGFTTKQMVNPW---KTYVKLSAV-LMGSHGLTKGSLAFLN  108 (260)
Q Consensus        36 ~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~-~~~--~~~~~~~~~~~P~---~~y~~~s~~-~~~~~~~~N~AL~yIs  108 (260)
                      -.+.+..++..++   -++...++.+++.... +..  ....+. ....+.   ......+.. ...+..+.+.++++++
T Consensus         4 a~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    4 AIYSVFSKKLLKK---ISPLSITFWRFLIAGILLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eeHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            3456667777633   2244566666655442 111  111111 112222   223344444 5788889999999999


Q ss_pred             chHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhc
Q 024937          109 YPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFT  156 (260)
Q Consensus       109 ~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~  156 (260)
                      ...-.+.....|+.++++|+++  +++|.+.+|++.+.++.+|+++..
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~--~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLF--LGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999  789999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.22  E-value=0.011  Score=53.95  Aligned_cols=134  Identities=9%  Similarity=0.163  Sum_probs=92.0

Q ss_pred             chHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHH-HHHHHHHhHHHhhc-cCchHHHHHhhccchheeehhhhcc
Q 024937           54 GWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAV-LMGSHGLTKGSLAF-LNYPAQIMFKSTKVLPVMIMGAFIP  131 (260)
Q Consensus        54 ~~~ltf~qfl~~~~~~~~~~~~~~~~~~P~~~y~~~s~~-~~~~~~~~N~AL~y-Is~P~~il~KS~klipvMl~g~~l~  131 (260)
                      +..+++..+++.......-..   +++.|++.....+.. ......+...+++| ++-..-.+.=++.|+.++++++++ 
T Consensus        32 p~~~~~~R~~~a~~~l~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~-  107 (299)
T PRK11453         32 PLMLAGLRFMLVAFPAIFFVA---RPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFT-  107 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc---CCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHH-
Confidence            455666666553322111111   123344444444443 23334456678888 766666666788899999999999 


Q ss_pred             ccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937          132 GLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       132 g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~  193 (260)
                       +|||.+.++++.+++..+|+.+....+.+ ..+.+..|.++.+.+-++-+....++++..+
T Consensus       108 -l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~  167 (299)
T PRK11453        108 -FGERLQGKQLAGIALAIFGVLVLIEDSLN-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMS  167 (299)
T ss_pred             -hcCcCcHHHHHHHHHHHHhHHHhccccCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             78999999999999999999887743222 1223457999999999999999999999765

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.15  E-value=0.029  Score=53.24  Aligned_cols=108  Identities=12%  Similarity=0.028  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhcccc------ccccCchhhHHHHHHHHHHHHhcccC
Q 024937           86 YVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGL------RRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        86 y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~------~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      ...++++-+....+.+.+++|+|--.-.+.=+..|+.+++++.++  +      ++|.+.+|++.+++=.+|+++....+
T Consensus        81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~--~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~  158 (358)
T PLN00411         81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIF--RMEKVSFKERSSVAKVMGTILSLIGALVVIFYH  158 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHH--HhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence            334444333344578999999999999999999999999999998  3      69999999999999999988765422


Q ss_pred             CC---------------------CCCChhHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 024937          160 AQ---------------------TSPNFSLIGVLMISGALVMDSFLGNLQEVIFTVN  195 (260)
Q Consensus       160 ~~---------------------~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~~~  195 (260)
                      ..                     .+.+....|.++++.|.++=++....|.+..+++
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~  215 (358)
T PLN00411        159 GPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY  215 (358)
T ss_pred             CcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            11                     0012246799999999999999999999988744

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.06  E-value=0.024  Score=51.76  Aligned_cols=138  Identities=11%  Similarity=-0.116  Sum_probs=90.3

Q ss_pred             chHHHHHHHHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHhHHHhhccC----chHHHHHhhccchheeehhhh
Q 024937           54 GWYFTFVQGFVYLVLIYLQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLN----YPAQIMFKSTKVLPVMIMGAF  129 (260)
Q Consensus        54 ~~~ltf~qfl~~~~~~~~~~~~~~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs----~P~~il~KS~klipvMl~g~~  129 (260)
                      +..+.+.-+....++...-..+++.++.+++.....++.+.....+.+.+++|.+    -..-.+.=+..|+.+++++++
T Consensus        32 P~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~  111 (295)
T PRK11689         32 PVGGAAMIYSVSGLLLLLTVGFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVL  111 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHH
Confidence            3445555554433322211112222333444333334445566667777887742    222245667789999999999


Q ss_pred             ccccccccCchhhHHHHHHHHHHHHhcccCCCCC-------CChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937          130 IPGLRRKYPAHEYVAALLLVFGLILFTMADAQTS-------PNFSLIGVLMISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       130 l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~-------~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~  193 (260)
                      +  .|||.+++|++.+++-.+|+++....+...+       ..+...|..+.+.|.++-+....+.+|..+
T Consensus       112 ~--~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~  180 (295)
T PRK11689        112 F--NGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR  180 (295)
T ss_pred             H--hcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            9  7899999999999999999988775442111       012456999999999999999999998754

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.04  E-value=0.00031  Score=64.27  Aligned_cols=151  Identities=14%  Similarity=0.163  Sum_probs=105.3

Q ss_pred             HHHHHhhhhhcc--CCCCcchHHHHHHHHHHHHHH-HHH----hc-----cC--CCCCCchHHHHHHHHHHHHHHHHhHH
Q 024937           37 VNGICEEYVYNR--LQFSYGWYFTFVQGFVYLVLI-YLQ----GF-----TT--KQMVNPWKTYVKLSAVLMGSHGLTKG  102 (260)
Q Consensus        37 ~~g~~qE~i~~~--~~~~~~~~ltf~qfl~~~~~~-~~~----~~-----~~--~~~~~P~~~y~~~s~~~~~~~~~~N~  102 (260)
                      ..+++...+++.  -.-+.+.++|+.|+++...+. .++    ..     .+  +-+-.-.++-.+.++.+......||.
T Consensus        42 ~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnl  121 (347)
T KOG1442|consen   42 GLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNL  121 (347)
T ss_pred             hhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccce
Confidence            344555555532  234668899999998865422 111    10     00  11112234456788899999999999


Q ss_pred             HhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC--CCChhHHHHHHHHHHHHH
Q 024937          103 SLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT--SPNFSLIGVLMISGALVM  180 (260)
Q Consensus       103 AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~--~~~~~~~G~~ll~~sL~~  180 (260)
                      .|+||++..+.+.||-..+.+.+..+++  +|.|=+..-..+.++|.+|   |.++-..+  .+..++.|++.-..|.+.
T Consensus       122 cL~yVgVaFYyvgRsLttvFtVlLtyvl--lkqkTs~~~~~~C~lIi~G---F~lGvdqE~~~~~ls~~GvifGVlaSl~  196 (347)
T KOG1442|consen  122 CLKYVGVAFYYVGRSLTTVFTVLLTYVL--LKQKTSFFALGCCLLIILG---FGLGVDQEGSTGTLSWIGVIFGVLASLA  196 (347)
T ss_pred             ehhhcceEEEEeccchhhhHHHHhHHhh--cccccccccceeehhheeh---heeccccccccCccchhhhHHHHHHHHH
Confidence            9999999999999999999999999999  8888888777777777666   33443322  234578899998888888


Q ss_pred             HHhHHHHHHHHH
Q 024937          181 DSFLGNLQEVIF  192 (260)
Q Consensus       181 dg~~~~~qe~l~  192 (260)
                      -|+-+++..+..
T Consensus       197 vAlnaiytkk~l  208 (347)
T KOG1442|consen  197 VALNAIYTKKVL  208 (347)
T ss_pred             HHHHHHhhheec
Confidence            888777666433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.01  E-value=0.033  Score=50.69  Aligned_cols=133  Identities=11%  Similarity=0.066  Sum_probs=91.5

Q ss_pred             chHHHHHHHHHHHHH--HHHHhccCC-CCCCchHHHHHHHHHH-HHHHHHhHHHh-hccCchHHHHHhhccchheeehhh
Q 024937           54 GWYFTFVQGFVYLVL--IYLQGFTTK-QMVNPWKTYVKLSAVL-MGSHGLTKGSL-AFLNYPAQIMFKSTKVLPVMIMGA  128 (260)
Q Consensus        54 ~~~ltf~qfl~~~~~--~~~~~~~~~-~~~~P~~~y~~~s~~~-~~~~~~~N~AL-~yIs~P~~il~KS~klipvMl~g~  128 (260)
                      +..+++..+++..++  .+....+.+ +++..++....++... .....+-+.+. ++++-..-.+.=+..|+-+++++.
T Consensus        36 p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~  115 (292)
T PRK11272         36 PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSR  115 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH
Confidence            456667666654432  222221111 1222333344455443 34566778888 889988888888999999999997


Q ss_pred             hccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 024937          129 FIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVLMISGALVMDSFLGNLQEVIF  192 (260)
Q Consensus       129 ~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~  192 (260)
                      ++   |||.+++|++++++-.+|+.+...++.   .+....|..+.+.+-++=|..+.+++|..
T Consensus       116 ~~---~e~~~~~~~~~~~la~~Gv~ll~~~~~---~~~~~~G~l~~l~a~~~~a~~~~~~~~~~  173 (292)
T PRK11272        116 LF---GIRTRKLEWLGIAIGLAGIVLLNSGGN---LSGNPWGAILILIASASWAFGSVWSSRLP  173 (292)
T ss_pred             Hh---cccCchhHHHHHHHHHHhHHHHhcCcc---cccchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            54   699999999999999999988754321   12345799999999999999998888754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.80  E-value=0.029  Score=51.24  Aligned_cols=92  Identities=13%  Similarity=0.204  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHH
Q 024937           90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLI  169 (260)
Q Consensus        90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~  169 (260)
                      ++.......+.++|++|++...-.+.-...|+.++++++++  +|||-+++|++.+++-.+|+++....+.    +..  
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~--l~E~~~~~~~~g~~l~~~Gv~li~~~~~----~~~--  151 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF--LGERFRRMQWLAVILAICGVLVQLWTFG----SLP--  151 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHcC----Ccc--
Confidence            45566778899999999999999999999999999999999  7899999999999999999987653221    111  


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHH
Q 024937          170 GVLMISGALVMDSFLGNLQEVI  191 (260)
Q Consensus       170 G~~ll~~sL~~dg~~~~~qe~l  191 (260)
                        .+.+.+.++=|+....+++.
T Consensus       152 --~~~l~aa~~~a~~~i~~r~~  171 (296)
T PRK15430        152 --IIALGLAFSFAFYGLVRKKI  171 (296)
T ss_pred             --HHHHHHHHHHHHHHHHHHhc
Confidence              22334456666677777664

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.64  E-value=0.0044  Score=58.91  Aligned_cols=98  Identities=16%  Similarity=0.279  Sum_probs=84.6

Q ss_pred             HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCC----CCh
Q 024937           91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTS----PNF  166 (260)
Q Consensus        91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~----~~~  166 (260)
                      ..-+.++...|+||+|=++.-.+|.-|.+-..++.+|.++  ..+|+++.|.++|++=..||++.+++|+++.    ++.
T Consensus       167 ~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if--~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~  244 (416)
T KOG2765|consen  167 PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIF--PVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR  244 (416)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHc--CcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence            4567899999999999999999999999999999999999  4699999999999999999999999987543    235


Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHH
Q 024937          167 SLIGVLMISGALVMDSFLGNLQEV  190 (260)
Q Consensus       167 ~~~G~~ll~~sL~~dg~~~~~qe~  190 (260)
                      ...|-++-+++-++=|+...+-.|
T Consensus       245 ~llG~llaL~sA~~YavY~vllk~  268 (416)
T KOG2765|consen  245 PLLGNLLALLSALLYAVYTVLLKR  268 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh
Confidence            688999888888887777665543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=96.55  E-value=0.031  Score=45.30  Aligned_cols=68  Identities=7%  Similarity=0.113  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937           88 KLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM  157 (260)
Q Consensus        88 ~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~  157 (260)
                      ..+...+..+..+...+++.|--++.+....|-+.+.++|+++  ++++.+..+++..++..+|+++.++
T Consensus        86 ~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~--f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   86 LSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIF--FGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhh--cCCcCCHHHHHHHHHHHHHHheeeC
Confidence            4466777888999999999999999999999999999999999  7899999999999999999987653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.50  E-value=0.067  Score=48.34  Aligned_cols=96  Identities=9%  Similarity=0.059  Sum_probs=73.8

Q ss_pred             HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHH
Q 024937           90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLI  169 (260)
Q Consensus        90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~  169 (260)
                      +........+-+.++++.+...-.+.-...|+-+.++|+++  +++|.+.++++.+.+...|+.+....+..   +.+..
T Consensus        70 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~--~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---~~~~~  144 (281)
T TIGR03340        70 AVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT--LGETLSPLAWLGILIITLGLLVLGLSRFA---QHRRK  144 (281)
T ss_pred             HHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHhccccc---ccchh
Confidence            34466777788999999999988888888899999999999  78999999999999999999877654321   12345


Q ss_pred             HHHHHHHHHHHHHhHHHHHHH
Q 024937          170 GVLMISGALVMDSFLGNLQEV  190 (260)
Q Consensus       170 G~~ll~~sL~~dg~~~~~qe~  190 (260)
                      |..+.+.+-++-+......++
T Consensus       145 g~~~~l~aal~~a~~~i~~k~  165 (281)
T TIGR03340       145 AYAWALAAALGTAIYSLSDKA  165 (281)
T ss_pred             HHHHHHHHHHHHHHhhhhccc
Confidence            776666666666666654443

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=96.10  E-value=0.024  Score=50.30  Aligned_cols=97  Identities=8%  Similarity=0.030  Sum_probs=75.5

Q ss_pred             HHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCCh
Q 024937           87 VKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNF  166 (260)
Q Consensus        87 ~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~  166 (260)
                      ...+........+-++|++|++...-.+.-.+.|+-+++++.++  +|||-++++++++++-.+|+++....+    .+.
T Consensus        74 ~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~--l~Ek~~~~~~l~~~~~~~Gv~li~~~~----~~~  147 (256)
T TIGR00688        74 LLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVF--LKERISRFQFIAVIIATLGVISNIVLK----GSL  147 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHc----CCc
Confidence            34455567778899999999999999999999999999999999  889999999999999999998765422    111


Q ss_pred             hHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937          167 SLIGVLMISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       167 ~~~G~~ll~~sL~~dg~~~~~qe~l~~  193 (260)
                      .    .+.+.+-++-+.....++|..+
T Consensus       148 ~----~~~l~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       148 P----WEALVLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             h----HHHHHHHHHHHHHHHHHhhcCC
Confidence            1    1234556666777777776543

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=95.77  E-value=0.53  Score=42.86  Aligned_cols=166  Identities=13%  Similarity=0.083  Sum_probs=96.7

Q ss_pred             cCCCchhHHHHHHHHHHHHHHhHHHHHhhhhhccCCCCcchHHHHHHHHHHHHHHH--HHhccCCCCCCchHHHHHHHHH
Q 024937           15 LSDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIY--LQGFTTKQMVNPWKTYVKLSAV   92 (260)
Q Consensus        15 ~~~~~~~~~l~~~~~gIf~~~~~~g~~qE~i~~~~~~~~~~~ltf~qfl~~~~~~~--~~~~~~~~~~~P~~~y~~~s~~   92 (260)
                      +.++|++.-....+.+.........+.+ ... . +.+ +..+.+..+++..+...  .+..+.+.++..++.....+..
T Consensus         5 ~~~~~~~~~~~~~~la~~~~~~~~~~~K-~~~-~-~~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~   80 (293)
T PRK10532          5 LRKLPVWLPILLLLIAMASIQSGASLAK-SLF-P-LVG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVS   80 (293)
T ss_pred             ccccccchHHHHHHHHHHHHHhhHHHHH-HHH-H-HcC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHH
Confidence            4566666655555555554444444333 333 1 222 33466777766543222  2211111111222334455666


Q ss_pred             HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCCCCChhHHHHH
Q 024937           93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQTSPNFSLIGVL  172 (260)
Q Consensus        93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~~~~~~~~G~~  172 (260)
                      ......+.+++++|++...-.+.-...|+.+++++      +||-.  +...+.+..+|+.+....+.+ ..+.+..|.+
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~------~~~~~--~~~~~~i~~~Gv~li~~~~~~-~~~~~~~G~l  151 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS------SRRPV--DFVWVVLAVLGLWFLLPLGQD-VSHVDLTGAA  151 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh------cCChH--HHHHHHHHHHHHheeeecCCC-cccCChHHHH
Confidence            77777888999999998888777777777776554      24433  334455556777665432221 2233567999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHh
Q 024937          173 MISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       173 ll~~sL~~dg~~~~~qe~l~~  193 (260)
                      +.+.+.++=+......++..+
T Consensus       152 l~l~aa~~~a~~~v~~r~~~~  172 (293)
T PRK10532        152 LALGAGACWAIYILSGQRAGA  172 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999888888765

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=95.56  E-value=0.092  Score=48.61  Aligned_cols=110  Identities=15%  Similarity=0.245  Sum_probs=93.7

Q ss_pred             chHH--HHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937           82 PWKT--YVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        82 P~~~--y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      |++.  +++.+++=...+.+=|..|.+=+=.-.++.|-+-.|.|=+++.-+  ++++-..+||+....+..|+++....|
T Consensus        83 pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~--Ln~ti~~~qWl~i~fv~lGlviVg~~d  160 (372)
T KOG3912|consen   83 PFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMF--LNRTITGRQWLGILFVSLGLVIVGSLD  160 (372)
T ss_pred             CCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHH--HhcccchhhHHHHHHHHhhhheeeeee
Confidence            5554  445677777778888889999888888999999999999999999  889999999999999999999888775


Q ss_pred             CCC------CCChhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 024937          160 AQT------SPNFSLIGVLMISGALVMDSFLGNLQEVIFT  193 (260)
Q Consensus       160 ~~~------~~~~~~~G~~ll~~sL~~dg~~~~~qe~l~~  193 (260)
                      -..      +.+.-..|.+++..+-++-|..-.++|+..+
T Consensus       161 ~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~  200 (372)
T KOG3912|consen  161 VHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLK  200 (372)
T ss_pred             cccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhh
Confidence            321      1234578999999999999999999999988

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=94.96  E-value=0.26  Score=43.27  Aligned_cols=58  Identities=14%  Similarity=0.211  Sum_probs=54.0

Q ss_pred             HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHH
Q 024937           93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGL  152 (260)
Q Consensus        93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv  152 (260)
                      ...+..+.++++++++...-.+.....|+..+++++++  ++++.+..+++.+.++..|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~--~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLI--LGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHhc
Confidence            45677789999999999999999999999999999999  78999999999999999986

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=94.94  E-value=0.058  Score=42.75  Aligned_cols=64  Identities=11%  Similarity=0.047  Sum_probs=57.2

Q ss_pred             HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhc
Q 024937           91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFT  156 (260)
Q Consensus        91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~  156 (260)
                      ..+..+..+-..+++.+|...--..-+..++-+++.|+++  +++|-+.+|++.+.++.+|+++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~--f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKL--WHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHh
Confidence            5577788888999999888887777889999999999999  889999999999999999998764

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=94.81  E-value=0.56  Score=42.67  Aligned_cols=65  Identities=12%  Similarity=0.159  Sum_probs=57.4

Q ss_pred             HHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937           96 SHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT  162 (260)
Q Consensus        96 ~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~  162 (260)
                      .+.+.+.+++++|-.+..+.=..||+..+++|+++  ++++-+..+++..+++.+|+.+....+.++
T Consensus       234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~--lge~lt~~~~~G~~lil~Gv~l~~~~k~~~  298 (302)
T TIGR00817       234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILF--FGTKISPQQVFGTGIAIAGVFLYSRVKAQK  298 (302)
T ss_pred             HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhh--cCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence            33566689999999999999999999999999999  789999999999999999999988765443

specificities overlap.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=93.95  E-value=0.44  Score=43.67  Aligned_cols=71  Identities=8%  Similarity=0.154  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937           90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT  162 (260)
Q Consensus        90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~  162 (260)
                      +.+.......-+...+..+=.+..+.-..+-+.++++++++  ++++.++.+++.++++..|+.+-.+.+.++
T Consensus       232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~--f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVII--FGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHh--cCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            33333333344555666777888899999999999999999  679999999999999999999988876543

; GO: 0055085 transmembrane transport

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=93.58  E-value=0.87  Score=43.23  Aligned_cols=66  Identities=15%  Similarity=0.175  Sum_probs=59.5

Q ss_pred             HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCC
Q 024937           94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQ  161 (260)
Q Consensus        94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~  161 (260)
                      ..+-++.|+++++++-..--++-..-|+..+++|+++  ++++-++.+++..++|.+|+.+...++.+
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~--LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIF--LNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            3466788999999999999999999999999999999  78999999999999999999999876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=93.10  E-value=1.4  Score=40.19  Aligned_cols=99  Identities=9%  Similarity=0.114  Sum_probs=73.2

Q ss_pred             HHHHHHHHHhHHHhhccCchHHHHHhh-ccchheeehhhhccccccccCchh----hHHHHHHHHHHHHhcccCCCCCC-
Q 024937           91 AVLMGSHGLTKGSLAFLNYPAQIMFKS-TKVLPVMIMGAFIPGLRRKYPAHE----YVAALLLVFGLILFTMADAQTSP-  164 (260)
Q Consensus        91 ~~~~~~~~~~N~AL~yIs~P~~il~KS-~klipvMl~g~~l~g~~krY~~~~----~~~v~lit~Gv~lf~~~~~~~~~-  164 (260)
                      ......+.+-..|.+|+++.+-+..=+ .-++-++++|.++  +|++.+.+|    +++++++.+|+++....++++.. 
T Consensus        67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~--f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~  144 (290)
T TIGR00776        67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIV--FGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI  144 (290)
T ss_pred             HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHH--hhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence            335566677778888877777655555 5566788899999  789999999    99999999999988776543221 


Q ss_pred             ---ChhHHHHHHHHHHHHHHHhHHHHHHHH
Q 024937          165 ---NFSLIGVLMISGALVMDSFLGNLQEVI  191 (260)
Q Consensus       165 ---~~~~~G~~ll~~sL~~dg~~~~~qe~l  191 (260)
                         .+...|+.+.++|-++=+.....-++.
T Consensus       145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~  174 (290)
T TIGR00776       145 KSEFNFKKGILLLLMSTIGYLVYVVVAKAF  174 (290)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence               223679988888877777777766643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=92.56  E-value=0.34  Score=39.15  Aligned_cols=74  Identities=8%  Similarity=0.153  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937           85 TYVKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA  160 (260)
Q Consensus        85 ~y~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~  160 (260)
                      .+......+..+..+=..|+++++..+ +-+.-....+-+.++|+++  ++++.++.|++.+.+|.+|+++.-+.++
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~--f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLL--FDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            355666777777888888999977654 3445677899999999999  8899999999999999999998877654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=92.56  E-value=0.42  Score=38.93  Aligned_cols=69  Identities=12%  Similarity=0.098  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhh--ccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937           90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAF--IPGLRRKYPAHEYVAALLLVFGLILFTMADA  160 (260)
Q Consensus        90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~--l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~  160 (260)
                      ...+..+..+-+.+++.++...---+=|.-.+-+++.++.  +  ++++-++.|++.+++|.+|+++...+++
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~--~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPW--FNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            4567788889999999966544443334444556666663  6  6799999999999999999999876554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=90.87  E-value=2  Score=38.93  Aligned_cols=65  Identities=12%  Similarity=0.132  Sum_probs=58.1

Q ss_pred             HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937           93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      ...+..+-++++++++-..-.+.-...|+..++.|+++  ++++.+..+++..+++..|+.+....+
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~--l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL--GGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH--cCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            34556788999999999999999999999999999999  789999999999999999999877644

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=89.23  E-value=0.0028  Score=57.66  Aligned_cols=84  Identities=13%  Similarity=0.367  Sum_probs=68.2

Q ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHH
Q 024937           75 TTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLIL  154 (260)
Q Consensus        75 ~~~~~~~P~~~y~~~s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~l  154 (260)
                      |++--++-+++|...++.=.-++.+=-.|.+|=|..--.+.-|-....+|+..|++  ++.||.+.|+..|+.--+|+++
T Consensus        70 R~~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~f--LktrYrlmki~gV~iCi~Gvvm  147 (336)
T KOG2766|consen   70 RRKYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFF--LKTRYRLMKISGVVICIVGVVM  147 (336)
T ss_pred             hhHHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHH--HHHHHhhheeeeEEeEecceEE
Confidence            33444567888888776655444444578899999999999999999999999999  9999999999999988889988


Q ss_pred             hcccCC
Q 024937          155 FTMADA  160 (260)
Q Consensus       155 f~~~~~  160 (260)
                      ...+|-
T Consensus       148 vV~sDV  153 (336)
T KOG2766|consen  148 VVFSDV  153 (336)
T ss_pred             EEEeee
Confidence            877663

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=89.18  E-value=1.4  Score=35.03  Aligned_cols=71  Identities=10%  Similarity=0.151  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHhHHHhhccCchHHHHHhh-ccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937           88 KLSAVLMGSHGLTKGSLAFLNYPAQIMFKS-TKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA  160 (260)
Q Consensus        88 ~~s~~~~~~~~~~N~AL~yIs~P~~il~KS-~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~  160 (260)
                      .....+..+..+=..|++.+|..+---.-+ ...+-+.++|+++  ++++-++.|++...+|.+|+++..+.++
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~--f~e~~~~~~~~gi~lIi~GVi~l~l~~~  106 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLVINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            344555566666677888888776555555 4788889999999  8899999999999999999998876553

>PRK11689 aromatic amino acid exporter; Provisional

Probab=88.73  E-value=3.7  Score=37.32  Aligned_cols=66  Identities=9%  Similarity=-0.019  Sum_probs=57.8

Q ss_pred             HHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937           92 VLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        92 ~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      ....+-.+-|+++++++-..-.++=...|+...++|+++  ++++-+..+++..++|.+|+.+....+
T Consensus       224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~--lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALL--LSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            344566778999999998888888899999999999999  789999999999999999998887654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=88.67  E-value=8.2  Score=36.24  Aligned_cols=65  Identities=11%  Similarity=0.205  Sum_probs=56.1

Q ss_pred             HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937           91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM  157 (260)
Q Consensus        91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~  157 (260)
                      +.++..+.++..+++.++--++.++=..|++.+.++|+++  ++++-+..+++..+++.+|+.+.++
T Consensus       284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~--~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIII--FQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHH--hCCCCchHhHHHHHHHHHHHHHHhh
Confidence            3444444445569999999999999999999999999999  7899999999999999999988765

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=87.76  E-value=5.7  Score=36.05  Aligned_cols=67  Identities=12%  Similarity=-0.014  Sum_probs=59.1

Q ss_pred             HHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCC
Q 024937           93 LMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQ  161 (260)
Q Consensus        93 ~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~  161 (260)
                      ...+..+.|+++++++-..--+.=..-|+...++|+++  ++++.+..+++..++|..|++.......+
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~--lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIF--LGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            45566688999999999999999999999999999999  78999999999999999999988765543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=85.18  E-value=11  Score=34.15  Aligned_cols=65  Identities=12%  Similarity=0.111  Sum_probs=55.0

Q ss_pred             HHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937           94 MGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA  160 (260)
Q Consensus        94 ~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~  160 (260)
                      ..+-.+-++++++++-..--+.-..-|+...+.|+++  ++++-+..+++..++|.+|+.+...++.
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~--lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALL--LDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH--hCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            3455577888888887777788888899999999999  7799999999999999999998877553

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=84.87  E-value=16  Score=33.16  Aligned_cols=66  Identities=14%  Similarity=0.088  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcc
Q 024937           90 SAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTM  157 (260)
Q Consensus        90 s~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~  157 (260)
                      +.....+..+-|+++++++-..--+.-...|+...++|+++  ++++.+..+++..++|.+|+.+...
T Consensus       220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~--l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTF--YGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            33455677899999999998888899999999999999999  7899999999999999888776654

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=83.75  E-value=8.4  Score=30.55  Aligned_cols=72  Identities=10%  Similarity=0.118  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937           86 YVKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        86 y~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      +......+..+-.+=-.|+|++|..+ +-+---...+-+-+.|+++  ++++-+..|.+...++.+|++.--+.+
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~--f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLL--FGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHh--cCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            34455555566666678889877665 3445555788888999999  889999999999999999998766543

>PRK11431 multidrug efflux system protein; Provisional

Probab=82.90  E-value=4.1  Score=32.05  Aligned_cols=70  Identities=14%  Similarity=0.197  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHhHHHhhccCchH-HHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhccc
Q 024937           87 VKLSAVLMGSHGLTKGSLAFLNYPA-QIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA  158 (260)
Q Consensus        87 ~~~s~~~~~~~~~~N~AL~yIs~P~-~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~  158 (260)
                      ......+..+..+=..|+|.+|..+ +-+-=....+-+-++|+++  ++++-++.|++...++.+|++.-.+.
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~--f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVL--LGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            4445566666666677888877665 3444456778888999999  78999999999999999999986544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=82.30  E-value=21  Score=31.05  Aligned_cols=62  Identities=16%  Similarity=0.223  Sum_probs=54.6

Q ss_pred             HHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhccc
Q 024937           95 GSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMA  158 (260)
Q Consensus        95 ~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~  158 (260)
                      .+..+-+.+++.++...-.+.-...++..+++++++  ++++.+..+++.++++..|+++....
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~--~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLL--LGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH--hCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            356777889999999888888888888888999999  78999999999999999999988765

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=81.24  E-value=2  Score=39.79  Aligned_cols=70  Identities=14%  Similarity=0.226  Sum_probs=59.8

Q ss_pred             HHHHHHHHHhHHHhhccCchHHHHHhhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCCCC
Q 024937           91 AVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADAQT  162 (260)
Q Consensus        91 ~~~~~~~~~~N~AL~yIs~P~~il~KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~~~  162 (260)
                      .++.....++-.|+.+-|-.+-.=.-+..++.+.+++..+  +++|.+.++++.++++.+|.++.....+++
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~--l~e~~~~~~~~G~~l~i~G~~liv~~~~~~  127 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFF--LGEKLTRRDIVGCALIILGSVLIVIFAPKE  127 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHH--hcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence            4556777888899999888887777899999999999999  889999999999999999998776655443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	260
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.52
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.03

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.52  E-value=0.0043  Score=47.86  Aligned_cols=72  Identities=10%  Similarity=0.172  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHhHHHhhccCchHHHHH-hhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccC
Q 024937           86 YVKLSAVLMGSHGLTKGSLAFLNYPAQIMF-KSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMAD  159 (260)
Q Consensus        86 y~~~s~~~~~~~~~~N~AL~yIs~P~~il~-KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~  159 (260)
                      +......+..+..+-+.|++++|...---. .+..++-+.++|+++  ++++-+..|++.+.+|.+|+++....+
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~--~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344456677888888999999998887555 999999999999999  889999999999999999999887755

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.03  E-value=0.0032  Score=50.78  Aligned_cols=72  Identities=10%  Similarity=0.178  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHHhHHHhhccCchHHHHH-hhccchheeehhhhccccccccCchhhHHHHHHHHHHHHhcccCC
Q 024937           87 VKLSAVLMGSHGLTKGSLAFLNYPAQIMF-KSTKVLPVMIMGAFIPGLRRKYPAHEYVAALLLVFGLILFTMADA  160 (260)
Q Consensus        87 ~~~s~~~~~~~~~~N~AL~yIs~P~~il~-KS~klipvMl~g~~l~g~~krY~~~~~~~v~lit~Gv~lf~~~~~  160 (260)
                      +...+.+..+..+-+.++++++...--.. .+..++.+.++|+++  ++++-++.|++.+++|.+|+++....+.
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~--lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGF--FGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHH--HC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            44456778888899999999998865555 999999999999999  8899999999999999999999887553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00