Citrus Sinensis ID: 025033

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVKKSEPKLQHHDGYEEIPSGPESA
cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEHHHHHEEHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEEEEccccccccEEEEccccEEcccEEEEEEccEEEEccccccccccccccccccEEEEccEEEEEcEEEEEEEEccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHEEEEEEEEcccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEHHHcccccEEEEEccccccccEEEEEEcccEEEccccccccccccccccccEEEEccEEEEccEEEEEEEcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHcccccccccc
MFVWEALQDLTLIILMVCAVLSIGVglategwpegmydgLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTrdgqrqkvsiYDLVVGDIVhlsigdqvpadgifiSGYSLLidesslsgesepmyicdenpfllagtkvqdgSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCipvkksepklqhhdgyeeipsgpesa
MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKqslqfrdldreKKKIFiqvtrdgqrqkvsIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVkksepklqhhdgyeeipsgpesa
MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGiilsillvvmvTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVKKSEPKLQHHDGYEEIPSGPESA
*FVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSL****EPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPV***********************
MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQF*******KKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETL****FDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVKKSEPK*Q***************
MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVKKSEPKLQHHDG***********
MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVKKSEPKLQHHDGYEEIP******
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLCILIGAVSMPIAVVIKCIPVKKSEPKLQHHDGYEEIPSGPESA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query259 2.2.26 [Sep-21-2011]
Q2QY12 1039 Probable calcium-transpor yes no 0.907 0.226 0.626 3e-84
Q2RAS0 1017 Probable calcium-transpor yes no 0.907 0.231 0.622 7e-84
Q9M2L4 1025 Putative calcium-transpor yes no 0.660 0.166 0.841 3e-83
O22218 1030 Calcium-transporting ATPa no no 0.664 0.166 0.831 1e-82
Q8RUN1 1043 Calcium-transporting ATPa no no 0.679 0.168 0.741 9e-77
O64806 1015 Putative calcium-transpor no no 0.675 0.172 0.748 1e-74
Q2QMX9 1020 Calcium-transporting ATPa no no 0.679 0.172 0.735 4e-74
O81108 1014 Calcium-transporting ATPa no no 0.675 0.172 0.737 1e-73
Q37145 1020 Calcium-transporting ATPa no no 0.687 0.174 0.719 2e-70
Q6ATV4 1033 Calcium-transporting ATPa no no 0.675 0.169 0.672 5e-68
>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 Back     alignment and function desciption
 Score =  311 bits (797), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 156/249 (62%), Positives = 191/249 (76%), Gaps = 14/249 (5%)

Query: 1   MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQ 60
           MFVW+ALQD+TLIILMVCA+LS+ VGLATEGWP+GMYDGLGIILSI LVVMVTA+SDYKQ
Sbjct: 165 MFVWDALQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQ 224

Query: 61  SLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLI 120
           SLQF++LD EKKKIFI VTRDG+RQK+SIYDLVVGDIVHLSIGDQVPADG++I GYSLLI
Sbjct: 225 SLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLI 284

Query: 121 DESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFDSW 180
           DESSLSGES+P+Y+  + PF+LAGTKVQDGS KM+VT VGMRTEWGKLM TL+EG  D  
Sbjct: 285 DESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDET 344

Query: 181 LF-------------VGILVLTVAFQIIIVEFLGALASTVP-LSWHLWLLCILIGAVSMP 226
                          +G++   + F +++V FL     TV  L W+      ++   +  
Sbjct: 345 PLQVKLNGVATIIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATA 404

Query: 227 IAVVIKCIP 235
           + +++  +P
Sbjct: 405 VTIIVVAVP 413
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8
>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 Back     alignment and function description
>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 Back     alignment and function description
>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 Back     alignment and function description
>sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 Back     alignment and function description
>sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 Back     alignment and function description
>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 Back     alignment and function description
>sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 Back     alignment and function description
>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 Back     alignment and function description
>sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query259
356572014 1035 PREDICTED: putative calcium-transporting 0.683 0.171 0.837 3e-83
242084534 1037 hypothetical protein SORBIDRAFT_08g00126 0.907 0.226 0.642 6e-83
413924830 1042 hypothetical protein ZEAMMB73_648201 [Ze 0.907 0.225 0.626 1e-82
18483249 1037 type IIB calcium ATPase [Medicago trunca 0.772 0.192 0.718 1e-82
115487236 1039 Os12g0136900 [Oryza sativa Japonica Grou 0.907 0.226 0.626 2e-82
346703744 1030 hypothetical_protein [Oryza glaberrima] 0.907 0.228 0.626 2e-82
125533331 1039 hypothetical protein OsI_35040 [Oryza sa 0.907 0.226 0.626 3e-82
346703260 1041 hypothetical_protein [Oryza brachyantha] 0.907 0.225 0.630 3e-82
356504762 1037 PREDICTED: putative calcium-transporting 0.683 0.170 0.831 3e-82
346703357 1010 hypothetical_protein [Oryza glaberrima] 0.907 0.232 0.622 4e-82
>gi|356572014|ref|XP_003554165.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max] Back     alignment and taxonomy information
 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 149/178 (83%), Positives = 167/178 (93%)

Query: 1   MFVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQ 60
           MFVW+ALQDLTLIILMVCAV+SIG+G+ATEGWP+G YDG+GIILSI LVV+VTA+SDYKQ
Sbjct: 161 MFVWDALQDLTLIILMVCAVVSIGIGIATEGWPKGTYDGVGIILSIFLVVIVTAVSDYKQ 220

Query: 61  SLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLI 120
           SLQFRDLD+EKKKIF+QV RDG+RQK+SIYD+VVGD+VHLS GDQVPADGIFISGYSLLI
Sbjct: 221 SLQFRDLDKEKKKIFVQVNRDGKRQKISIYDIVVGDVVHLSTGDQVPADGIFISGYSLLI 280

Query: 121 DESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGMFD 178
           DESSLSGESEP+ I +E PFLL+GTKVQDG  KMLVTTVGMRTEWGKLMETLN+G  D
Sbjct: 281 DESSLSGESEPVNINEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNQGGED 338

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|242084534|ref|XP_002442692.1| hypothetical protein SORBIDRAFT_08g001260 [Sorghum bicolor] gi|241943385|gb|EES16530.1| hypothetical protein SORBIDRAFT_08g001260 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|413924830|gb|AFW64762.1| hypothetical protein ZEAMMB73_648201 [Zea mays] Back     alignment and taxonomy information
>gi|18483249|gb|AAL73984.1|AF466149_1 type IIB calcium ATPase [Medicago truncatula] Back     alignment and taxonomy information
>gi|115487236|ref|NP_001066105.1| Os12g0136900 [Oryza sativa Japonica Group] gi|110832728|sp|Q2QY12.1|ACA4_ORYSJ RecName: Full=Probable calcium-transporting ATPase 4, plasma membrane-type; AltName: Full=Ca(2+)-ATPase isoform 4 gi|77552962|gb|ABA95758.1| Calcium-transporting ATPase 4, plasma membrane-type, putative, expressed [Oryza sativa Japonica Group] gi|113648612|dbj|BAF29124.1| Os12g0136900 [Oryza sativa Japonica Group] gi|125578434|gb|EAZ19580.1| hypothetical protein OsJ_35157 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|346703744|emb|CBX24412.1| hypothetical_protein [Oryza glaberrima] Back     alignment and taxonomy information
>gi|125533331|gb|EAY79879.1| hypothetical protein OsI_35040 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|346703260|emb|CBX25358.1| hypothetical_protein [Oryza brachyantha] Back     alignment and taxonomy information
>gi|356504762|ref|XP_003521164.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type-like [Glycine max] Back     alignment and taxonomy information
>gi|346703357|emb|CBX25454.1| hypothetical_protein [Oryza glaberrima] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query259
TAIR|locus:2082528 1025 ACA11 "autoinhibited Ca2+-ATPa 0.671 0.169 0.798 2.9e-99
TAIR|locus:2062673 1030 ACA4 ""autoinhibited Ca(2+)-AT 0.675 0.169 0.782 2e-96
TAIR|locus:2059201 1015 ACA7 "auto-regulated Ca2+-ATPa 0.675 0.172 0.702 9.2e-78
TAIR|locus:2120096 1014 ACA2 "calcium ATPase 2" [Arabi 0.675 0.172 0.691 1.3e-77
TAIR|locus:2029794 1020 ACA1 "autoinhibited Ca2+-ATPas 0.675 0.171 0.68 1.2e-74
TAIR|locus:2123924 1069 ACA10 "autoinhibited Ca(2+)-AT 0.756 0.183 0.492 2.6e-62
TAIR|locus:2175579 1074 ACA8 ""autoinhibited Ca2+ -ATP 0.667 0.161 0.534 6e-60
TAIR|locus:2094726 1086 ACA9 "autoinhibited Ca(2+)-ATP 0.756 0.180 0.485 1.4e-58
TAIR|locus:2087363 1033 AT3G63380 [Arabidopsis thalian 0.667 0.167 0.459 4.5e-51
TAIR|locus:2084578 1017 AT3G22910 [Arabidopsis thalian 0.664 0.169 0.473 2.2e-49
TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 710 (255.0 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
 Identities = 139/174 (79%), Positives = 154/174 (88%)

Query:     2 FVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGXXXXXXXXXXXTAISDYKQS 61
             FVWEALQD+TLIILMVCAV+SIGVG+ATEG+P+GMYDG G           TAISDYKQS
Sbjct:   161 FVWEALQDITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQS 220

Query:    62 LQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLID 121
             LQFRDLDREKKKI IQVTRDG RQ+VSI+DLVVGD+VHLSIGDQVPADGIFISGY+L ID
Sbjct:   221 LQFRDLDREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEID 280

Query:   122 ESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEG 175
             ESSLSGESEP ++  E PFLL+GTKVQ+GS KMLVTTVGMRTEWGKLM+TL+EG
Sbjct:   281 ESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEG 334
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0006754 "ATP biosynthetic process" evidence=IEA
GO:0006812 "cation transport" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0070588 "calcium ion transmembrane transport" evidence=IEA
GO:0005516 "calmodulin binding" evidence=ISS
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0009705 "plant-type vacuole membrane" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IGI
GO:0043069 "negative regulation of programmed cell death" evidence=IGI
GO:0055081 "anion homeostasis" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M2L4ACA11_ARATH3, ., 6, ., 3, ., 80.84180.66020.1668yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query259
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 4e-76
pfam00122222 pfam00122, E1-E2_ATPase, E1-E2 ATPase 2e-33
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 2e-30
TIGR01517944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 1e-20
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 6e-18
TIGR01522 884 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- 3e-17
TIGR01647 754 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e 1e-16
TIGR01106 997 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux 6e-15
TIGR01116 917 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic 2e-14
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 2e-14
TIGR01525 556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 3e-13
TIGR01511 572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 2e-11
TIGR01657 1054 TIGR01657, P-ATPase-V, P-type ATPase of unknown pu 4e-11
TIGR01523 1053 TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu 7e-11
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 9e-11
PRK15122 903 PRK15122, PRK15122, magnesium-transporting ATPase; 3e-10
TIGR01512 536 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb 3e-10
PRK10517 902 PRK10517, PRK10517, magnesium-transporting ATPase 1e-08
PRK11033 741 PRK11033, zntA, zinc/cadmium/mercury/lead-transpor 3e-08
pfam00689175 pfam00689, Cation_ATPase_C, Cation transporting AT 1e-07
PRK10671 834 PRK10671, copA, copper exporting ATPase; Provision 3e-06
PRK14010 673 PRK14010, PRK14010, potassium-transporting ATPase 1e-05
COG2216 681 COG2216, KdpB, High-affinity K+ transport system, 2e-05
PRK01122 679 PRK01122, PRK01122, potassium-transporting ATPase 3e-05
TIGR01497 675 TIGR01497, kdpB, K+-transporting ATPase, B subunit 6e-05
TIGR01652 1057 TIGR01652, ATPase-Plipid, phospholipid-translocati 1e-04
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information 
 Score =  247 bits (633), Expect = 4e-76
 Identities = 97/184 (52%), Positives = 129/184 (70%), Gaps = 6/184 (3%)

Query: 2   FVWEALQDLTLIILMVCAVLSIGVGL-----ATEGWPEGMYDGLGIILSILLVVMVTAIS 56
            VW AL D TLI+L V AV+S+ +GL            G  +G+ I++S++LVV+VTA++
Sbjct: 90  IVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVN 149

Query: 57  DYKQSLQFRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGY 116
           DYK+ LQFR L+REK    I V R GQ Q++SI+D+VVGDIV LS GD VPADG+FISG 
Sbjct: 150 DYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL 209

Query: 117 SLLIDESSLSGESEPMYI-CDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEG 175
           SL IDESS++GES+P+     ++PFLL+GT V +GS +MLVT VG+ +  GKLM  L + 
Sbjct: 210 SLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQA 269

Query: 176 MFDS 179
             DS
Sbjct: 270 GEDS 273

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944
>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase Back     alignment and domain information
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit Back     alignment and domain information
>gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 259
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 100.0
TIGR01647 755 ATPase-IIIA_H plasma-membrane proton-efflux P-type 100.0
TIGR01522 884 ATPase-IIA2_Ca golgi membrane calcium-translocatin 100.0
PRK10517 902 magnesium-transporting ATPase MgtA; Provisional 100.0
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 100.0
TIGR01524 867 ATPase-IIIB_Mg magnesium-translocating P-type ATPa 100.0
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 100.0
PRK01122 679 potassium-transporting ATPase subunit B; Provision 100.0
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 100.0
PRK15122 903 magnesium-transporting ATPase; Provisional 100.0
TIGR01511 562 ATPase-IB1_Cu copper-(or silver)-translocating P-t 100.0
TIGR01497 675 kdpB K+-transporting ATPase, B subunit. One sequen 100.0
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 100.0
PRK10671 834 copA copper exporting ATPase; Provisional 100.0
TIGR01512 536 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo 100.0
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 100.0
PRK14010 673 potassium-transporting ATPase subunit B; Provision 100.0
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 100.0
TIGR01525 556 ATPase-IB_hvy heavy metal translocating P-type ATP 100.0
KOG0202 972 consensus Ca2+ transporting ATPase [Inorganic ion 100.0
PF00122230 E1-E2_ATPase: E1-E2 ATPase p-type cation-transport 100.0
KOG0204 1034 consensus Calcium transporting ATPase [Inorganic i 100.0
TIGR01657 1054 P-ATPase-V P-type ATPase of unknown pump specifici 100.0
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 100.0
KOG0205 942 consensus Plasma membrane H+-transporting ATPase [ 100.0
TIGR01494 499 ATPase_P-type ATPase, P-type (transporting), HAD s 99.97
KOG0208 1140 consensus Cation transport ATPase [Inorganic ion t 99.96
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 99.95
KOG0203 1019 consensus Na+/K+ ATPase, alpha subunit [Inorganic 99.94
COG2216 681 KdpB High-affinity K+ transport system, ATPase cha 99.93
PLN03190 1178 aminophospholipid translocase; Provisional 99.92
KOG0209 1160 consensus P-type ATPase [Inorganic ion transport a 99.89
KOG0210 1051 consensus P-type ATPase [Inorganic ion transport a 99.81
KOG0206 1151 consensus P-type ATPase [General function predicti 99.64
smart0083164 Cation_ATPase_N Cation transporter/ATPase, N-termi 94.21
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 93.63
KOG4383 1354 consensus Uncharacterized conserved protein [Funct 93.58
KOG02041034 consensus Calcium transporting ATPase [Inorganic i 91.75
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-42  Score=331.66  Aligned_cols=238  Identities=24%  Similarity=0.274  Sum_probs=188.0

Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCcchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhCCceEEEEE-CCEEEEee
Q 025033           11 TLIILMVCAVLSIGVGLATEGWPEGMYD-GLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTR-DGQRQKVS   88 (259)
Q Consensus        11 ~~~l~l~~a~~s~~~~~~~~~~~~~~~~-~~~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r-~g~~~~i~   88 (259)
                      +..++.+++..+++++.+..-++ .||+ +..++++++++.++|.+.+.++++++++|.++.|+ .+++++ ||++++|+
T Consensus       149 md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~-~A~~~~~~~~~~~v~  226 (713)
T COG2217         149 MDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPK-TATVVRGDGEEEEVP  226 (713)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-EEEEEecCCcEEEEE
Confidence            45556666666665554422222 4555 55555556677799999999999999999999997 776665 55589999


Q ss_pred             CCCccCCcEEEEcCCCEEeccEEEEecceeEEeccccCCCCcceeecCCCCEEEecceEecceEEEEEEEeCccccccch
Q 025033           89 IYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVGMRTEWGKL  168 (259)
Q Consensus        89 ~~~lv~GDii~v~~G~~iP~D~~vl~g~~l~vdes~lTGEs~pv~k~~~~~~v~~Gt~~~~g~~~~~V~~tg~~t~~~~i  168 (259)
                      .+|+++||+++|+|||+||+||++++|++ .+|||++||||.|+.|.+||. |++||.|.+|..+++|+++|.+|+++||
T Consensus       227 v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~I  304 (713)
T COG2217         227 VEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARI  304 (713)
T ss_pred             HHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHH
Confidence            99999999999999999999999999999 899999999999999999999 9999999999999999999999999999


Q ss_pred             hhhccccccCchhHHHHHH-------HHHHHHHHHHHHHhHhhccCCccHHHHHHHH-HHhhhhhhhhhhhccccCCCCC
Q 025033          169 METLNEGMFDSWLFVGILV-------LTVAFQIIIVEFLGALASTVPLSWHLWLLCI-LIGAVSMPIAVVIKCIPVKKSE  240 (259)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~-~il~ia~P~al~l~~~P~a~~~  240 (259)
                      +++++++|.+|++..++..       +.+.+...+.+.++++..  +.+|..|++++ .+|+++|||||+++ +|.+...
T Consensus       305 i~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~--~~~~~~a~~~a~avLVIaCPCALgLA-tP~ai~~  381 (713)
T COG2217         305 IRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG--GGDWETALYRALAVLVIACPCALGLA-TPTAILV  381 (713)
T ss_pred             HHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHhheeeeCccHHHhH-HHHHHHH
Confidence            9999999999986544443       333332222222222222  24678888887 57999999999999 9998888


Q ss_pred             CccccccceeecCCC
Q 025033          241 PKLQHHDGYEEIPSG  255 (259)
Q Consensus       241 ~~~~~~~~~~~~~~~  255 (259)
                      +..++++++.++||+
T Consensus       382 g~g~aA~~GILiK~g  396 (713)
T COG2217         382 GIGRAARRGILIKGG  396 (713)
T ss_pred             HHHHHHhCceEEeCh
Confidence            877766655555554

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>PRK10517 magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>PRK01122 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15122 magnesium-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>TIGR01497 kdpB K+-transporting ATPase, B subunit Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>PRK14010 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase Back     alignment and domain information
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0206 consensus P-type ATPase [General function prediction only] Back     alignment and domain information
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4383 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query259
3b8e_A 998 Crystal Structure Of The Sodium-Potassium Pump Leng 5e-11
3n23_A 992 Crystal Structure Of The High Affinity Complex Betw 5e-11
2zxe_A 1028 Crystal Structure Of The Sodium - Potassium Pump In 1e-10
3b8c_A 885 Crystal Structure Of A Plasma Membrane Proton Pump 3e-08
3ba6_A 994 Structure Of The Ca2e1p Phosphoenzyme Intermediate 4e-08
2dqs_A 995 Crystal Structure Of The Calcium Pump With Amppcp I 4e-08
1kju_A 994 Ca2+-Atpase In The E2 State Length = 994 4e-08
3ixz_A 1034 Pig Gastric H+K+-Atpase Complexed With Aluminium Fl 4e-08
3tlm_A 992 Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp 7e-08
3j08_A 645 High Resolution Helical Reconstruction Of The Bacte 4e-07
3j09_A 723 High Resolution Helical Reconstruction Of The Bacte 5e-07
2hc8_A113 Structure Of The A. Fulgidus Copa A-Domain Length = 1e-06
3rfu_A 736 Crystal Structure Of A Copper-Transporting Pib-Type 2e-05
1mhs_A 920 Model Of Neurospora Crassa Proton Atpase Length = 9 2e-05
2kij_A124 Solution Structure Of The Actuator Domain Of The Co 3e-04
>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 Back     alignment and structure 
Iteration: 1

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 21  LSIGVGLATEGWPEGMYDGLGXXXXXXXXXXXTAISDYKQSLQFRDLDREKKKIFIQ--- 77
           L+ G+  ATE  P+   D L            T    Y Q  +   +    K +  Q   
Sbjct: 88  LAYGIQAATEEEPQN--DNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQAL 145
Query: 78  VTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGESEPMY---- 133
           V R+G++  ++  ++VVGD+V +  GD++PAD   IS     +D SSL+GESEP      
Sbjct: 146 VIRNGEKMSINAEEVVVGDLVEVKGGDRIPADLRIISANGCKVDNSSLTGESEPQTRSPD 205
Query: 134 ICDENPF-----LLAGTKVQDGSVKMLVTTVGMRTEWGKLMETLNEGM 176
             +ENP          T   +G+ + +V   G RT  G++  TL  G+
Sbjct: 206 FTNENPLETRNIAFFSTNCVEGTARGIVVYTGDRTVMGRIA-TLASGL 252
>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 Back     alignment and structure
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 Back     alignment and structure
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 Back     alignment and structure
>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 Back     alignment and structure
>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 Back     alignment and structure
>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 Back     alignment and structure
>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 Back     alignment and structure
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 Back     alignment and structure
>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 Back     alignment and structure
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 Back     alignment and structure
>pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 Back     alignment and structure
>pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 Back     alignment and structure
>pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 Back     alignment and structure
>pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query259
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 1e-30
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 2e-30
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 2e-28
3b8c_A885 ATPase 2, plasma membrane-type; P-type ATPase, pro 2e-04
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 7e-26
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 6e-25
3ar4_A995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 2e-04
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 2e-12
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 3e-12
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 2e-11
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 8e-11
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
 Score =  119 bits (300), Expect = 1e-30
 Identities = 63/253 (24%), Positives = 107/253 (42%), Gaps = 45/253 (17%)

Query: 7   LQDLTLIILMVCAVLS-IGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQ-- 63
           L     I+L + A+L  +  G+      E   D L + + +  VV+VT    Y Q  +  
Sbjct: 101 LFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSS 160

Query: 64  -----FRDLDREKKKIFIQVTRDGQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSL 118
                F+++  ++      V RDG++  ++   +V GD+V +  GD++PAD   IS +  
Sbjct: 161 RIMDSFKNMVPQQAL----VIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGC 216

Query: 119 LIDESSLSGESEP----MYICDENPF-----LLAGTKVQDGSVKMLVTTVGMRTEWGK-- 167
            +D SSL+GESEP         ENP          T   +G+ + +V   G RT  G+  
Sbjct: 217 KVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276

Query: 168 -LMETLNEGM---------FDSWLFVGILVLTVAFQIIIVEFLGALASTVPLSWHLWLLC 217
            L   L  G          F   +    + L V+F      F+ +L     +  + WL  
Sbjct: 277 TLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSF------FILSL-----ILGYSWLEA 325

Query: 218 ILIGAVSMPIAVV 230
           ++   + + +A V
Sbjct: 326 VIF-LIGIIVANV 337
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query259
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 100.0
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 100.0
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 100.0
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 100.0
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 100.0
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 100.0
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 100.0
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 100.0
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 99.98
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 99.97
2jmz_A186 Hypothetical protein MJ0781; unknown function; NMR 85.93
2lcj_A185 PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi 80.07
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Back     alignment and structure
Probab=100.00  E-value=2.8e-40  Score=326.67  Aligned_cols=242  Identities=19%  Similarity=0.190  Sum_probs=191.3

Q ss_pred             hHHHHhhHHHHHHHHHHHHHHHHHhhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhCCceEEEEEC
Q 025033            2 FVWEALQDLTLIILMVCAVLSIGVGLATEGWPEGMYDGLGIILSILLVVMVTAISDYKQSLQFRDLDREKKKIFIQVTRD   81 (259)
Q Consensus         2 ~~~~~~~~~~~~l~l~~a~~s~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~   81 (259)
                      .|++||++|++++++++++++++++        .|.++..++++++++.+++.++++++++.+++|.++.++ +++|+||
T Consensus       115 ~~l~~f~~~~~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~-~a~V~Rd  185 (920)
T 1mhs_A          115 KFLGFFVGPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLAL-KAVVLRD  185 (920)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS-SCEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-EEEEEEC
Confidence            5789999999999999999888765        567777777777788899999999999999999888764 8999999


Q ss_pred             CEEEEeeCCCccCCcEEEEcCCCEEeccEEEEecce-eEEeccccCCCCcceeecCCCCEEEecceEecceEEEEEEEeC
Q 025033           82 GQRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYS-LLIDESSLSGESEPMYICDENPFLLAGTKVQDGSVKMLVTTVG  160 (259)
Q Consensus        82 g~~~~i~~~~lv~GDii~v~~G~~iP~D~~vl~g~~-l~vdes~lTGEs~pv~k~~~~~~v~~Gt~~~~g~~~~~V~~tg  160 (259)
                      |++++|+++||+|||+|.+++||+|||||++++|++ +.||||+|||||.|+.|++++. +|+||.+.+|.++++|++||
T Consensus       186 G~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd~-v~sGT~v~~G~~~~~V~~tG  264 (920)
T 1mhs_A          186 GTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ-VFASSAVKRGEAFVVITATG  264 (920)
T ss_dssp             SSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSCE-ECSCBCCSCCCEEEEEEECS
T ss_pred             CEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEecCCCe-eecCceEecceEEEEEEEeC
Confidence            999999999999999999999999999999999985 7999999999999999999986 99999999999999999999


Q ss_pred             ccccccchhhhccccccCchhHHHHHHHHHHHHHH---HHHHHhHhhcc-CCccHHHHHHHH-HHhhhhhhhhhhhcccc
Q 025033          161 MRTEWGKLMETLNEGMFDSWLFVGILVLTVAFQII---IVEFLGALAST-VPLSWHLWLLCI-LIGAVSMPIAVVIKCIP  235 (259)
Q Consensus       161 ~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---iv~~~~~~~~~-~~~~~~~~~~~~-~il~ia~P~al~l~~~P  235 (259)
                      .+|.+||+.+++++++..++++...+..+...+.+   ++.++.++... ....|..++..+ .+++++|||+|.++ +|
T Consensus       265 ~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~-vt  343 (920)
T 1mhs_A          265 DNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAV-VT  343 (920)
T ss_dssp             TTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHH-HH
T ss_pred             CcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHH-HH
Confidence            99999999999999888777665433322211111   11111111111 122455555544 57889999999999 88


Q ss_pred             CCCCCCccc-cccceeecCC
Q 025033          236 VKKSEPKLQ-HHDGYEEIPS  254 (259)
Q Consensus       236 ~a~~~~~~~-~~~~~~~~~~  254 (259)
                      ++......+ +++|.+.+++
T Consensus       344 i~la~g~~~mak~~ilvk~~  363 (920)
T 1mhs_A          344 TTMAVGAAYLAKKKAIVQKL  363 (920)
T ss_dssp             HHHHHHHHHHHHTTCCCCCT
T ss_pred             HHHHHHHHHHHhCCeEEecC
Confidence            765443333 3444444443
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Back     alignment and structure
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A Back     alignment and structure
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 259
d1wpga1115 b.82.7.1 (A:125-239) Calcium ATPase, transduction 6e-15
d1wpga4472 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP 9e-08
d1wpga4 472 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP 2e-04
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 67.0 bits (163), Expect = 6e-15
 Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 16/112 (14%)

Query: 77  QVTRDGQR--QKVSIYDLVVGDIVHLSIGDQVPADGIFISGY--SLLIDESSLSGESEPM 132
           +V R  ++  Q++   D+V GDIV +++GD+VPAD   +S    +L +D+S L+GES  +
Sbjct: 4   KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63

Query: 133 YICDE------------NPFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETL 172
               E               L +GT +  G    +V T G+ TE GK+ + +
Sbjct: 64  IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 Back     information, alignment and structure
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query259
d1wpga1115 Calcium ATPase, transduction domain A {Rabbit (Ory 99.95
d1wpga4 472 Calcium ATPase, transmembrane domain M {Rabbit (Or 98.03
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Calcium ATPase, transduction domain A
family: Calcium ATPase, transduction domain A
domain: Calcium ATPase, transduction domain A
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.95  E-value=3.8e-29  Score=187.14  Aligned_cols=98  Identities=36%  Similarity=0.556  Sum_probs=88.9

Q ss_pred             eEEEEECCEE--EEeeCCCccCCcEEEEcCCCEEeccEEEEecc--eeEEeccccCCCCcceeecCC------------C
Q 025033           75 FIQVTRDGQR--QKVSIYDLVVGDIVHLSIGDQVPADGIFISGY--SLLIDESSLSGESEPMYICDE------------N  138 (259)
Q Consensus        75 ~~~v~r~g~~--~~i~~~~lv~GDii~v~~G~~iP~D~~vl~g~--~l~vdes~lTGEs~pv~k~~~------------~  138 (259)
                      .++|+|+|++  ++|+++||+|||+|.+++|+++||||++++++  ++.+|||+|||||.|+.|.++            .
T Consensus         2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~   81 (115)
T d1wpga1           2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK   81 (115)
T ss_dssp             EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred             ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence            5789999985  78999999999999999999999999998744  368999999999999999753            3


Q ss_pred             CEEEecceEecceEEEEEEEeCccccccchhhhc
Q 025033          139 PFLLAGTKVQDGSVKMLVTTVGMRTEWGKLMETL  172 (259)
Q Consensus       139 ~~v~~Gt~~~~g~~~~~V~~tg~~t~~~~i~~~~  172 (259)
                      |++|+||.+.+|+++++|++||.+|.+|||.+.+
T Consensus        82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i  115 (115)
T d1wpga1          82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM  115 (115)
T ss_dssp             TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred             ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence            5799999999999999999999999999998753
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure