Citrus Sinensis ID: 025081

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MRKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMADSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccHHHHHHHHccccHHHHHHHHHcHHHHHcccccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHcccHHHHHHHHHcccHHHHccHccccccccccccccHHHHHHHHHHHHcccEEHHHHHHHHHHHHcccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHEEccc
Coil and Loop (DISEMBL)
MRKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLengrssrqdmadsskrpvsrsqlniEKESRAVNEKAASLIECMVrdymqpvecsplheivcfknVETLQLALIGDPRRRIQIDLLESYKILrcsccsrsghsllpslhdTSILYNLAQehgdhinlhDWYQSFKSKvcssrskgkhkskqsplpkkrkdmnepdkpceASIQARFCKAVTELQITglirmptkrrpdFVQRVAFGL
Flexible Loop (DISEMBL)
mrkgrlicqavqkvrdlpiaQLYKLLKRWEELTVDINEIHAKLKELLSVIKlengrssrqdmadsskrpvsrsqlniekesravnEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQlaligdprRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKvcssrskgkhkskqsplpkkrkdmnepDKPCEASIQARFCKAVTELQitglirmptkrrpdFVQRVAFGL
Low Complexity Region (SEG)
MRKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMADSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL
Disordered region (IsUnstruct)
*****LICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKL************************************ASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKS***********************************IQARFCKAVTELQITGLIRMPT**************
Disordered Region (DISOPRED)
****RLI*QAVQKVRDLPIAQLYKLLKRWEELTV****************************************************KAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILR****************DTSILYNLAQEHGDHINLHDWYQSFKSK********************************ASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL
Disordered Region (DISEMBL)
MRKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGR*****************QLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKS********************************EASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL
Disordered Region (DISPRO)
**KGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLE**********************NIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCS***************************CEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMADSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
Q5DJU3	713	Origin recognition comple	N/A	no	0.658	0.238	0.324	2e-16
Q9UBD5	711	Origin recognition comple	yes	no	0.616	0.223	0.312	2e-15
Q4R180	711	Origin recognition comple	yes	no	0.604	0.219	0.323	1e-14
Q32PJ3	712	Origin recognition comple	yes	no	0.658	0.238	0.298	6e-14
Q9JK30	715	Origin recognition comple	yes	no	0.593	0.213	0.312	3e-13
Q10067	690	Origin recognition comple	yes	no	0.426	0.159	0.338	1e-10
Q55BR6	1080	Origin recognition comple	yes	no	0.534	0.127	0.273	6e-06

>sp|Q5DJU3|ORC3_SPECI Origin recognition complex subunit 3 OS=Spermophilus citellus GN=ORC3 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 21/191 (10%)

Query: 68  RPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGD 127
           R  S+ Q   E     + EK  + I+C+VR+Y+ P E  PLHE+V F    TL+  L   
Sbjct: 541 RRTSKKQTRFE----VLREKVVNFIDCLVREYLLPPETQPLHEVVYFSAAHTLREHLNAA 596

Query: 128 PRRRIQIDLLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFK 186
           PR  +   L + Y  ++     +S    +P++  D  I Y L  E    INL DW ++F 
Sbjct: 597 PRIALHTALNDPYFYIKNEAL-KSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFA 655

Query: 187 SKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKR 246
           + V ++  K +  S  +      ++MNE        I ARF +AV+EL++ G I+ PTK+
Sbjct: 656 T-VVTAAEKMESNSATT------EEMNE-------IIHARFIRAVSELELLGFIK-PTKQ 700

Query: 247 RPDFVQRVAFG 257
           + D V R+ +G
Sbjct: 701 KTDHVARLTWG 711

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
Spermophilus citellus (taxid: 9997)

>sp|Q9UBD5|ORC3_HUMAN Origin recognition complex subunit 3 OS=Homo sapiens GN=ORC3 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 17/176 (9%)

Query: 83  AVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKI 142
            + E   + I+C+VR+Y+ P E  PLHE+V F     L+  L   PR  +   L   Y  
Sbjct: 550 VLRENVVNFIDCLVREYLLPPETQPLHEVVYFSAAHALREHLNAAPRIALHTALNNPYYY 609

Query: 143 LRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSK 201
           L+     +S    +P++  D  I Y L  E    INL DW ++F + V ++     + + 
Sbjct: 610 LKNEAL-KSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAEKMDANSAT 668

Query: 202 QSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFG 257
                   ++MNE        I ARF +AV+EL++ G I+ PTK++ D V R+ +G
Sbjct: 669 S-------EEMNE-------IIHARFIRAVSELELLGFIK-PTKQKTDHVARLTWG 709

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Homo sapiens (taxid: 9606)

>sp|Q4R180|ORC3_RAT Origin recognition complex subunit 3 OS=Rattus norvegicus GN=Orc3 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 17/173 (9%)

Query: 86  EKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRC 145
           E   + I+ +VRDY+ P E  PLHE+V F    TL+  L   PR  +   L   Y  L+ 
Sbjct: 553 ENVINFIDNLVRDYLLPPEGQPLHEVVYFSAANTLREHLNAAPRIALHTALNNPYYYLKN 612

Query: 146 SCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSP 204
               +S    +PS+  D  I Y L  E    INL DW ++F + V ++     + +    
Sbjct: 613 EAL-KSEEGCIPSVAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAEKMDTNSTVS-- 669

Query: 205 LPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFG 257
                ++M+E        I ARF +AV+EL++ G I+ PTK++ D V R+ +G
Sbjct: 670 -----EEMSE-------IIHARFIRAVSELELLGFIK-PTKQKTDHVARLTWG 709

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Rattus norvegicus (taxid: 10116)

>sp|Q32PJ3|ORC3_BOVIN Origin recognition complex subunit 3 OS=Bos taurus GN=ORC3 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 21/191 (10%)

Query: 68  RPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGD 127
           R  S+ Q   E     + E+  S ++ +VR+Y+ P +  PLHE + F +  TL+  L   
Sbjct: 540 RSTSKRQTKFE----VLREQVVSFVDSLVREYLLPPDTQPLHETLYFSSAHTLRQHLNAA 595

Query: 128 PRRRIQIDLLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFK 186
           PR  +   L   Y  L+     RS    +P++  D  I Y L  E    INL DW ++F 
Sbjct: 596 PRIALHTALNNPYYYLKNEAL-RSEEGCIPNVAPDICIAYKLHLECSRLINLVDWSEAFA 654

Query: 187 SKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKR 246
           + V ++     +    S    +R ++          I ARF +AV+EL++ G I+ PTK+
Sbjct: 655 TVVTAAEKMDAN----SVTSGERNEI----------IHARFIRAVSELELLGFIK-PTKQ 699

Query: 247 RPDFVQRVAFG 257
           + D V R+ +G
Sbjct: 700 KTDHVARLTWG 710

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Bos taurus (taxid: 9913)

>sp|Q9JK30|ORC3_MOUSE Origin recognition complex subunit 3 OS=Mus musculus GN=Orc3 PE=1 SV=1

 Score = 75.9 bits (185), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 20/173 (11%)

Query: 86  EKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRC 145
           E   + I+ +VRDY+ P E  PLHE+V F    TL+  L   PR  +   L   Y  L+ 
Sbjct: 560 ENVMNFIDNLVRDYLLPPESQPLHEVVYFSAANTLREHLNAAPRIALHTALNNPYYYLK- 618

Query: 146 SCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSP 204
              +      +P+   D  I Y L  E    INL DW ++F + V ++     + +    
Sbjct: 619 ---NEELEGCIPNTAPDICIAYKLHLECSLLINLVDWAEAFATVVTAAEKMDANSTVS-- 673

Query: 205 LPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFG 257
                ++M+E        I ARF +AV+EL++ G I+ PTK++ D V R+ +G
Sbjct: 674 -----EEMSE-------VIHARFIRAVSELELLGFIK-PTKQKTDHVARLTWG 713

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Mus musculus (taxid: 10090)

>sp|Q10067|ORC3_SCHPO Origin recognition complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=orc3 PE=1 SV=2

 Score = 66.6 bits (161), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)

Query: 146 SCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKS---KQ 202
           S   + G  L+  L D SILY L  E G  +NL+DWY +F   + + +   K      ++
Sbjct: 572 SNAEKDGKDLISWLPDLSILYKLYSESGALLNLYDWYIAFSEHLQAGKENLKEDDNHPRE 631

Query: 203 SPLPKKRKDMNEPD----KPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAF 256
           SP    ++++NE D    K  EA +Q+RF   + EL+  GLI+ PT R+ D V +  +
Sbjct: 632 SPQGNLQRELNELDEDKRKLEEAKLQSRFLFGLEELRFLGLIK-PTARKTDHVMKTIY 688

Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. ORC binds to multiple sites within the ars1 origin of DNA replication in an ATP-independent manner.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q55BR6|ORC3_DICDI Origin recognition complex subunit 3 OS=Dictyostelium discoideum GN=orcC PE=3 SV=2

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 30/168 (17%)

Query: 91   LIECMVRDYMQPVECS-PLHEIVCF-KNVETLQLALIGDPRRRIQIDLLESYKILRCSCC 148
            ++  ++ DY+ P   S PL EI  F + V   Q          I  +L+ S + L+C CC
Sbjct: 937  IVSVIIEDYLYPPLVSVPLSEIFDFTQTVFITQSRFNFHTAEGINDNLIHSVRKLKCECC 996

Query: 149  SRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKK 208
                 SL  ++ D SI + L    G +IN  DW  SF S +             +P P  
Sbjct: 997  I---DSLCGTMDDFSISFILLLRSGRYINYFDWLTSFCSII---------NGDNNPTP-- 1042

Query: 209  RKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAF 256
                         +++ARF K+V       LI+  T++R D  +++AF
Sbjct: 1043 -------------NLKARFIKSVDTFVSLELIK-KTRKRKDHFEKIAF 1076

Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
297737264	4326	unnamed protein product [Vitis vinifera]	0.976	0.058	0.699	1e-99
356544321	736	PREDICTED: origin recognition complex su	0.980	0.343	0.610	7e-88
449451968	737	PREDICTED: origin recognition complex su	0.992	0.347	0.583	2e-82
79514788	734	origin recognition complex subunit 3 [Ar	0.988	0.347	0.578	1e-73
297807693	741	ATORC3/ORC3 [Arabidopsis lyrata subsp. l	0.976	0.340	0.581	6e-72
224126189	693	predicted protein [Populus trichocarpa]	0.740	0.275	0.718	7e-68
255558117	715	origin recognition complex subunit, puta	0.697	0.251	0.668	7e-66
357492691	176	Origin recognition complex subunit [Medi	0.674	0.988	0.643	7e-63
115481914	718	Os10g0402200 [Oryza sativa Japonica Grou	0.945	0.339	0.498	2e-58
449521792	159	PREDICTED: origin recognition complex su	0.616	1.0	0.660	3e-58

>gi|297737264|emb|CBI26465.3| unnamed protein product [Vitis vinifera]

 Score =  369 bits (946), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 177/253 (69%), Positives = 207/253 (81%), Gaps = 1/253 (0%)

Query: 6    LICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMADS 65
             ICQA++KVRDLP+  LY+LLK WE+LT D+ EIH K+KEL S++K ENG+S +QD+ + 
Sbjct: 4075 FICQAIRKVRDLPVVLLYQLLKSWEKLTEDVIEIHDKVKELQSLLKFENGKSLKQDLTNI 4134

Query: 66   SKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALI 125
             KR  SRS LN++K+S+ +NEKAA L+E MVRDYMQPVEC P HEIVCFKNV+ LQ AL+
Sbjct: 4135 PKRHTSRSHLNMDKDSKVLNEKAARLMETMVRDYMQPVECIPFHEIVCFKNVDKLQSALM 4194

Query: 126  GDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSF 185
            GDPRRRIQ+DLLE  KIL CSCCS S  ++LPS+HDTSILY LAQEHGD INLHDWYQSF
Sbjct: 4195 GDPRRRIQLDLLEFQKILLCSCCSNSSKAILPSMHDTSILYTLAQEHGDLINLHDWYQSF 4254

Query: 186  KSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTK 245
            KS V    +KGKHK KQSP  KKRKD NE     EASIQ RFC+AVTELQITGL+RMP+K
Sbjct: 4255 KSTVFQPSTKGKHKLKQSP-AKKRKDTNESQNQSEASIQVRFCRAVTELQITGLLRMPSK 4313

Query: 246  RRPDFVQRVAFGL 258
            RRPD+VQRVAFGL
Sbjct: 4314 RRPDYVQRVAFGL 4326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544321|ref|XP_003540601.1| PREDICTED: origin recognition complex subunit 3-like [Glycine max]

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 158/259 (61%), Positives = 205/259 (79%), Gaps = 6/259 (2%)

Query: 1   MRKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQ 60
           M+ G +I + V KVRD+P   LY+L++ WE+LT D++EIH KLK L S ++ E+G+SSR+
Sbjct: 483 MKSGGIIGKIVCKVRDIPTGMLYQLIESWEKLTADVSEIHEKLKILQSSVRCEDGKSSRK 542

Query: 61  DMADSSKR-PVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVET 119
              D+SKR PV     NI+K++R +N +A + ++ ++R++++PVE  P HEI CFKNVE 
Sbjct: 543 SSKDNSKRYPV-----NIDKDARMLNLQAIAFLDYLLRNFLKPVEGMPFHEIFCFKNVEK 597

Query: 120 LQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLH 179
           LQL LIGDPRRRIQ+DLLE +KILRCSCCS+SG++LLPS HD+SI+Y+LAQEHGD INLH
Sbjct: 598 LQLVLIGDPRRRIQVDLLEFHKILRCSCCSKSGNALLPSRHDSSIMYSLAQEHGDLINLH 657

Query: 180 DWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGL 239
           DW+QSF++ V   ++K K  SKQSP  KKRKD+N      EASIQARFC+AVTELQITGL
Sbjct: 658 DWFQSFRTIVIQHKNKRKQNSKQSPSSKKRKDINGSADQNEASIQARFCRAVTELQITGL 717

Query: 240 IRMPTKRRPDFVQRVAFGL 258
           +RMP+KRRPDF QRVAFGL
Sbjct: 718 VRMPSKRRPDFAQRVAFGL 736

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451968|ref|XP_004143732.1| PREDICTED: origin recognition complex subunit 3-like [Cucumis sativus]

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/257 (58%), Positives = 194/257 (75%), Gaps = 1/257 (0%)

Query: 2   RKGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQD 61
           RK   I Q V+KVRDLP   L++LL  WE++T  + EIH  +K+LL   KL NG+SS +D
Sbjct: 482 RKDGYIYQVVRKVRDLPAEFLHQLLMSWEKITGCVPEIHQNVKDLLLAFKLGNGKSSEKD 541

Query: 62  MADSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQ 121
           +AD SKR  SR+ L + K S+ + EK  S +  +VR++M+PVEC P HE++CFK+V  LQ
Sbjct: 542 IADLSKRHASRNGLFV-KNSKPIMEKTESFLNSLVREHMRPVECIPFHELICFKDVRKLQ 600

Query: 122 LALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDW 181
           LALIGDPRRRIQ+DLLE  KI++C+CCS + +SLLP  HD++I+Y+LAQEHGD INLHDW
Sbjct: 601 LALIGDPRRRIQVDLLEFQKIIKCTCCSENMNSLLPCAHDSTIMYSLAQEHGDLINLHDW 660

Query: 182 YQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIR 241
           +QSFK  +   ++KG H++KQ   PKKRKD    ++   ASIQARFC AVTELQI GL+R
Sbjct: 661 FQSFKRVISHPQAKGNHRTKQCSTPKKRKDKPTVERKSNASIQARFCTAVTELQIAGLLR 720

Query: 242 MPTKRRPDFVQRVAFGL 258
           MP+KRRPD+VQRVAFGL
Sbjct: 721 MPSKRRPDYVQRVAFGL 737

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79514788|ref|NP_197171.2| origin recognition complex subunit 3 [Arabidopsis thaliana] gi|47681285|gb|AAT37463.1| origin recognition complex protein 3 [Arabidopsis thaliana] gi|332004943|gb|AED92326.1| origin recognition complex subunit 3 [Arabidopsis thaliana]

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/256 (57%), Positives = 188/256 (73%), Gaps = 1/256 (0%)

Query: 3   KGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDM 62
           +  +I + ++K+RDL  +QL  +LK WE LT +  EI+ K+ EL   ++       RQ +
Sbjct: 478 RNNVIRRVLRKLRDLSPSQLSSMLKSWENLTAEFTEINDKVIELHPFMRAVEAAGQRQGL 537

Query: 63  ADSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQL 122
            +S K+  SRS   +EKE +A+ +K A++IE M+R+YM+PVE  P HEI+CFKNV+ LQ 
Sbjct: 538 PNSPKKHASRSNSKLEKELKAMTDKVATVIEFMLREYMKPVESVPFHEILCFKNVDKLQS 597

Query: 123 ALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWY 182
           AL+GDPR RIQ+DLLES+ IL C CCS+ G +LLPS+HDTSILY LAQEH D INLHDWY
Sbjct: 598 ALLGDPRGRIQLDLLESHDILHCVCCSQRGTTLLPSMHDTSILYKLAQEHADVINLHDWY 657

Query: 183 QSFKSKVCSSRSKGKHKSKQSPLPKKRKDM-NEPDKPCEASIQARFCKAVTELQITGLIR 241
           QSFK+ +    SK K KSK S   KKRK++  EP+ P EA IQARFC+AV ELQITGLIR
Sbjct: 658 QSFKTILIPRSSKAKQKSKSSSKSKKRKEICEEPEAPAEALIQARFCRAVMELQITGLIR 717

Query: 242 MPTKRRPDFVQRVAFG 257
           MP+KRRPDFVQRVAFG
Sbjct: 718 MPSKRRPDFVQRVAFG 733

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807693|ref|XP_002871730.1| ATORC3/ORC3 [Arabidopsis lyrata subsp. lyrata] gi|297317567|gb|EFH47989.1| ATORC3/ORC3 [Arabidopsis lyrata subsp. lyrata]

 Score =  276 bits (706), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 147/253 (58%), Positives = 187/253 (73%), Gaps = 1/253 (0%)

Query: 6   LICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMADS 65
           +I + ++K+RDL  +QL  +LK WE LT + +EI+ K+ EL   ++       RQ + +S
Sbjct: 488 VIRRVLRKLRDLSPSQLSSMLKSWENLTTEFSEINDKVMELHPFMRSVEAAGQRQGLPNS 547

Query: 66  SKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALI 125
            K+  SRS   +EKE +A+ +K A++IE M+R+YM+PVE  P HEI+CFKNV+ LQ AL+
Sbjct: 548 PKKHASRSHAKLEKELKAMTDKVATVIEFMLREYMKPVESVPFHEILCFKNVDKLQSALL 607

Query: 126 GDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSF 185
           GD R RIQ+DLLES+KIL C CCS+ G +LLPS+HDTSILY LAQEH D INLHDWYQSF
Sbjct: 608 GDQRGRIQLDLLESHKILHCVCCSQRGTTLLPSMHDTSILYTLAQEHADVINLHDWYQSF 667

Query: 186 KSKVCSSRSKGKHKSKQSPLPKKRKDM-NEPDKPCEASIQARFCKAVTELQITGLIRMPT 244
           K+ +    SK K KSK S   KKRKD+  EP+ P EA IQARFC+A+ ELQI GLIRMP+
Sbjct: 668 KTILIPKSSKAKQKSKSSSKSKKRKDICEEPEAPAEALIQARFCRAIMELQIAGLIRMPS 727

Query: 245 KRRPDFVQRVAFG 257
           KRRPDFVQRVAFG
Sbjct: 728 KRRPDFVQRVAFG 740

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126189|ref|XP_002319778.1| predicted protein [Populus trichocarpa] gi|222858154|gb|EEE95701.1| predicted protein [Populus trichocarpa]

 Score =  263 bits (671), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/192 (71%), Positives = 156/192 (81%), Gaps = 1/192 (0%)

Query: 67  KRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIG 126
           +R  SR  L IE +S+AVNEKAA L+E MVR+YMQP+EC P HEIVCFKNV  LQ ALIG
Sbjct: 503 RRHSSRKHLKIE-DSKAVNEKAAKLLESMVRNYMQPLECVPFHEIVCFKNVNALQTALIG 561

Query: 127 DPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFK 186
           DPRRRIQ+DLL+   I+RCSCC  S +SLLPS+HD+SI+Y LAQEHGD INLHDWYQSFK
Sbjct: 562 DPRRRIQVDLLDVRNIIRCSCCISSSNSLLPSMHDSSIMYTLAQEHGDLINLHDWYQSFK 621

Query: 187 SKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKR 246
           S V    +KGKH S  SP  KKRK   EP KP EASIQARFC+AVTELQITGL+RMP+KR
Sbjct: 622 SIVICLSNKGKHGSNYSPSLKKRKATTEPAKPSEASIQARFCRAVTELQITGLLRMPSKR 681

Query: 247 RPDFVQRVAFGL 258
           RPD+VQRVAFGL
Sbjct: 682 RPDYVQRVAFGL 693

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558117|ref|XP_002520087.1| origin recognition complex subunit, putative [Ricinus communis] gi|223540851|gb|EEF42411.1| origin recognition complex subunit, putative [Ricinus communis]

 Score =  256 bits (654), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 121/181 (66%), Positives = 147/181 (81%), Gaps = 1/181 (0%)

Query: 67  KRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIG 126
           +R  SRS L+  K+S+  NEKA  L E M+R+++QPVEC P HEI+CFK+V+ LQ AL+G
Sbjct: 516 RRNASRSHLHF-KDSKVANEKAVRLAEYMIRNHLQPVECIPFHEIICFKSVDNLQAALLG 574

Query: 127 DPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFK 186
            PRRRIQ+DLLE + I+ CSCC RSG+SLLPS+HD+SI+Y+LAQEHGD +NLHDWYQSFK
Sbjct: 575 HPRRRIQVDLLEFHNIIHCSCCRRSGNSLLPSVHDSSIMYSLAQEHGDLVNLHDWYQSFK 634

Query: 187 SKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKR 246
           S + SS +KGKH+SK SP PKKRK   E  KP EASIQARFC+AVTELQITGLIRMP K 
Sbjct: 635 SVILSSSNKGKHRSKHSPSPKKRKVTTETAKPSEASIQARFCRAVTELQITGLIRMPVKE 694

Query: 247 R 247
           +
Sbjct: 695 K 695

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357492691|ref|XP_003616634.1| Origin recognition complex subunit [Medicago truncatula] gi|355517969|gb|AES99592.1| Origin recognition complex subunit [Medicago truncatula]

 Score =  246 bits (628), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 112/174 (64%), Positives = 142/174 (81%)

Query: 85  NEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILR 144
           N +A + ++ +VR+Y++P+E  P +EI CFKNVE LQ  LIGDPRRRIQ+DLLE + IL 
Sbjct: 3   NLQAIAFLDDLVRNYLRPIEGMPFNEIFCFKNVEKLQSVLIGDPRRRIQVDLLEFHNILC 62

Query: 145 CSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSP 204
           CSCC++SG  LLPS HD+SI+Y+LAQEHGD INLHDW+QSF++ V  + +K K KSKQ+P
Sbjct: 63  CSCCNKSGKGLLPSRHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNTNKRKQKSKQTP 122

Query: 205 LPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL 258
           L KKRK+MN      EASIQARFC+ +TELQITGL+RMP+KRRPDFVQR+AFG+
Sbjct: 123 LSKKRKEMNGSADQNEASIQARFCRGITELQITGLVRMPSKRRPDFVQRIAFGI 176

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115481914|ref|NP_001064550.1| Os10g0402200 [Oryza sativa Japonica Group] gi|113639159|dbj|BAF26464.1| Os10g0402200 [Oryza sativa Japonica Group]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/255 (49%), Positives = 169/255 (66%), Gaps = 11/255 (4%)

Query: 5   RLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSV-IKLENGRSSRQDMA 63
           R I Q +  +R LP+  L+ LL+ W      +++I  K+KEL S  I  ++ R ++    
Sbjct: 474 RFIDQVMDTIRYLPVETLFCLLEVWSIHLNGMDKITNKVKELQSTTISTDSVRITKD--- 530

Query: 64  DSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLA 123
              K P  RS  +    + A+N+K A L++ + R ++  VEC P HEIVCFKNV  LQ A
Sbjct: 531 ---KWP-RRSTNSTGNSTVALNDKVAMLLDDVTRKFLVSVECLPFHEIVCFKNVSILQSA 586

Query: 124 LIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQ 183
           LIG+PRR +Q+DL++S+K L+CSCC ++G ++L S+HDTSI+ NLAQE+GD INLHDWY 
Sbjct: 587 LIGNPRRMVQLDLVKSHKHLKCSCCRKNGIAVLASMHDTSIMCNLAQEYGDVINLHDWYI 646

Query: 184 SFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMP 243
           SF   + S  SK K K   SP  KK K +       EA IQARFC+AVTELQITGL+RMP
Sbjct: 647 SFDGIINSVHSKIKRKPHTSPSKKKSKPVAAES---EAMIQARFCRAVTELQITGLLRMP 703

Query: 244 TKRRPDFVQRVAFGL 258
           +KRRPD VQR+AFGL
Sbjct: 704 SKRRPDLVQRIAFGL 718

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521792|ref|XP_004167913.1| PREDICTED: origin recognition complex subunit 3-like [Cucumis sativus]

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 130/159 (81%)

Query: 100 MQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSL 159
           M+PVEC P HE++CFK+V  LQLALIGDPRRRIQ+DLLE  KI++C+CCS + +SLLP  
Sbjct: 1   MRPVECIPFHELICFKDVRKLQLALIGDPRRRIQVDLLEFQKIIKCTCCSENMNSLLPCA 60

Query: 160 HDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPC 219
           HD++I+Y+LAQEHGD INLHDW+QSFK  +   ++KG H++KQ   PKKRKD    ++  
Sbjct: 61  HDSTIMYSLAQEHGDLINLHDWFQSFKRVISHPQAKGNHRTKQCSTPKKRKDKPTVERKS 120

Query: 220 EASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFGL 258
            ASIQARFC AVTELQI GL+RMP+KRRPD+VQRVAFGL
Sbjct: 121 NASIQARFCTAVTELQIAGLLRMPSKRRPDYVQRVAFGL 159

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2148995	734	ORC3 "origin recognition compl	0.988	0.347	0.578	9.3e-75
UNIPROTKB|Q5DJU3	713	ORC3 "Origin recognition compl	0.856	0.309	0.297	1.7e-17
FB|FBgn0005654	721	lat "latheo" [Drosophila melan	0.666	0.238	0.331	5.8e-17
UNIPROTKB|Q9UBD5	711	ORC3 "Origin recognition compl	0.709	0.257	0.305	8e-15
UNIPROTKB|F1Q348	712	ORC3 "Uncharacterized protein"	0.848	0.307	0.296	1.3e-14
UNIPROTKB|F1N6W8	712	ORC3 "Origin recognition compl	0.875	0.317	0.274	3.5e-14
UNIPROTKB|Q32PJ3	712	ORC3 "Origin recognition compl	0.875	0.317	0.274	7.4e-14
UNIPROTKB|F1S0E8	717	ORC3 "Uncharacterized protein"	0.856	0.308	0.274	9.5e-14
RGD|1308457	711	Orc3 "origin recognition compl	0.612	0.222	0.337	3.6e-13
UNIPROTKB|F1P1T5	719	ORC3 "Uncharacterized protein"	0.883	0.317	0.267	2.3e-11

TAIR|locus:2148995 ORC3 "origin recognition complex subunit 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
 Identities = 148/256 (57%), Positives = 188/256 (73%)

Query:     3 KGRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDM 62
             +  +I + ++K+RDL  +QL  +LK WE LT +  EI+ K+ EL   ++       RQ +
Sbjct:   478 RNNVIRRVLRKLRDLSPSQLSSMLKSWENLTAEFTEINDKVIELHPFMRAVEAAGQRQGL 537

Query:    63 ADSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQL 122
              +S K+  SRS   +EKE +A+ +K A++IE M+R+YM+PVE  P HEI+CFKNV+ LQ 
Sbjct:   538 PNSPKKHASRSNSKLEKELKAMTDKVATVIEFMLREYMKPVESVPFHEILCFKNVDKLQS 597

Query:   123 ALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWY 182
             AL+GDPR RIQ+DLLES+ IL C CCS+ G +LLPS+HDTSILY LAQEH D INLHDWY
Sbjct:   598 ALLGDPRGRIQLDLLESHDILHCVCCSQRGTTLLPSMHDTSILYKLAQEHADVINLHDWY 657

Query:   183 QSFKSKVCSSRSKGKHKSKQSPLPKKRKDM-NEPDKPCEASIQARFCKAVTELQITGLIR 241
             QSFK+ +    SK K KSK S   KKRK++  EP+ P EA IQARFC+AV ELQITGLIR
Sbjct:   658 QSFKTILIPRSSKAKQKSKSSSKSKKRKEICEEPEAPAEALIQARFCRAVMELQITGLIR 717

Query:   242 MPTKRRPDFVQRVAFG 257
             MP+KRRPDFVQRVAFG
Sbjct:   718 MPSKRRPDFVQRVAFG 733

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA;ISS

GO:0000808 "origin recognition complex" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0000724 "double-strand break repair via homologous recombination" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006261 "DNA-dependent DNA replication" evidence=RCA

UNIPROTKB|Q5DJU3 ORC3 "Origin recognition complex subunit 3" [Spermophilus citellus (taxid:9997)]

 Score = 224 (83.9 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 72/242 (29%), Positives = 115/242 (47%)

Query:    21 QLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMADSSKRPVSRSQLN--IE 78
             QL    KR EE       + A  KE       +     + D+    K  +   +L    +
Sbjct:   486 QLGSTAKRIEEFLAQFQSLDADAKEEEDASGSQPKGLQKTDLYHLQKSLLEMKELRRTSK 545

Query:    79 KESR--AVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDL 136
             K++R   + EK  + I+C+VR+Y+ P E  PLHE+V F    TL+  L   PR  +   L
Sbjct:   546 KQTRFEVLREKVVNFIDCLVREYLLPPETQPLHEVVYFSAAHTLREHLNAAPRIALHTAL 605

Query:   137 LESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSK 195
              + Y  ++     +S    +P++  D  I Y L  E    INL DW ++F + V ++   
Sbjct:   606 NDPYFYIKNEAL-KSEEGCIPNIAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAE-- 662

Query:   196 GKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVA 255
              K +S  +      ++MNE        I ARF +AV+EL++ G I+ PTK++ D V R+ 
Sbjct:   663 -KMESNSATT----EEMNE-------IIHARFIRAVSELELLGFIK-PTKQKTDHVARLT 709

Query:   256 FG 257
             +G
Sbjct:   710 WG 711

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS

FB|FBgn0005654 lat "latheo" [Drosophila melanogaster (taxid:7227)]

 Score = 219 (82.2 bits), Expect = 5.8e-17, P = 5.8e-17
 Identities = 66/199 (33%), Positives = 103/199 (51%)

Query:    57 SSRQDMADS----SKRPVSRSQLNIEKES--RAVNEKAASLIEC-MVRDYMQPVE-CSPL 108
             +SRQ++ D     SK    R QLN       RA+ +K   LIE  +V+D+++ ++   P+
Sbjct:   532 ASRQELKDQLLQRSKEDKMRHQLNTPTTQFGRAL-QKTLQLIETQIVQDHLRALQDAPPI 590

Query:   109 HEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLP-SLHDTSILYN 167
             HE+  F ++ T++  +IG PR  +   L   +  ++C CC     SLL  +L D S++Y 
Sbjct:   591 HELFVFSDIATVRRNIIGAPRAALHTALNNPHFYMQCKCCELQDQSLLVGTLPDLSVVYK 650

Query:   168 LAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARF 227
             L  E G  INL DW Q+F+S V  S     H+       +  ++  +P       IQARF
Sbjct:   651 LHLECGRMINLFDWLQAFRSVVSDS----DHE-------EVAQEQIDPQ------IQARF 693

Query:   228 CKAVTELQITGLIRMPTKR 246
              +AV ELQ  G I+M  ++
Sbjct:   694 TRAVAELQFLGYIKMSKRK 712

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS;IDA

GO:0006270 "DNA replication initiation" evidence=IDA

GO:0008355 "olfactory learning" evidence=TAS

GO:0006260 "DNA replication" evidence=NAS

GO:0003677 "DNA binding" evidence=IEA;NAS

GO:0007612 "learning" evidence=NAS

GO:0030536 "larval feeding behavior" evidence=NAS

GO:0007611 "learning or memory" evidence=NAS

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0051298 "centrosome duplication" evidence=IMP

GO:0051297 "centrosome organization" evidence=IMP

GO:0072686 "mitotic spindle" evidence=IDA

UNIPROTKB|Q9UBD5 ORC3 "Origin recognition complex subunit 3" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 8.0e-15, P = 8.0e-15
 Identities = 62/203 (30%), Positives = 97/203 (47%)

Query:    59 RQDMADSSKRPVSRSQLNIEKES---RAVNEKAASLIECMVRDYMQPVECSPLHEIVCFK 115
             + D+    K  +   +L   K+      + E   + I+C+VR+Y+ P E  PLHE+V F 
Sbjct:   523 KTDLYHLQKSLLEMKELRRSKKQTKFEVLRENVVNFIDCLVREYLLPPETQPLHEVVYFS 582

Query:   116 NVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGD 174
                 L+  L   PR  +   L   Y  L+     +S    +P++  D  I Y L  E   
Sbjct:   583 AAHALREHLNAAPRIALHTALNNPYYYLKNEAL-KSEEGCIPNIAPDICIAYKLHLECSR 641

Query:   175 HINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTEL 234
              INL DW ++F + V ++  K    S  S      ++MNE        I ARF +AV+EL
Sbjct:   642 LINLVDWSEAFAT-VVTAAEKMDANSATS------EEMNE-------IIHARFIRAVSEL 687

Query:   235 QITGLIRMPTKRRPDFVQRVAFG 257
             ++ G I+ PTK++ D V R+ +G
Sbjct:   688 ELLGFIK-PTKQKTDHVARLTWG 709

GO:0005664 "nuclear origin of replication recognition complex" evidence=IDA

GO:0000808 "origin recognition complex" evidence=IDA

GO:0003688 "DNA replication origin binding" evidence=TAS

GO:0000075 "cell cycle checkpoint" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000084 "S phase of mitotic cell cycle" evidence=TAS

GO:0000216 "M/G1 transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006260 "DNA replication" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1Q348 ORC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 197 (74.4 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 72/243 (29%), Positives = 113/243 (46%)

Query:    21 QLYKLLKRWEELTVDINEI-HAKLKELLSVIKLENGRSSRQDMADSSKRPVSRSQLNI-- 77
             QL    KR EE       +  AK +E  S   L  G   + D+    K  +   +L    
Sbjct:   486 QLGSTAKRIEEFLAQFQNLDEAKEEEDTSG-SLSKGLQ-KTDLYHLQKSLLEMKELRRTN 543

Query:    78 EKESR--AVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQID 135
             +K++R   + EK  + I+ +VR+Y+ P E  PLHE+V F    TL+  L   PR  +   
Sbjct:   544 KKQTRFEVLREKVVNFIDSLVREYLLPPETQPLHEVVYFTAGHTLREHLNAAPRIALHTA 603

Query:   136 LLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRS 194
             L   Y  L+     +S    +P++  D  I Y L  E    INL DW ++F + V ++  
Sbjct:   604 LNNPYYYLKNEAL-KSEEGCIPNVAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAEK 662

Query:   195 KGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRV 254
                     S   ++R ++          I ARF +AV+EL++ G I+ PTK++ D V R+
Sbjct:   663 M----DADSATSEERNEI----------IHARFIRAVSELELLGFIK-PTKQKTDHVARL 707

Query:   255 AFG 257
              +G
Sbjct:   708 TWG 710

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1N6W8 ORC3 "Origin recognition complex subunit 3" [Bos taurus (taxid:9913)]

 Score = 193 (73.0 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 70/255 (27%), Positives = 120/255 (47%)

Query:     4 GRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMA 63
             G+ +    +++ +  +AQ   L +  EE   D ++  +K  +   +  L+      +++ 
Sbjct:   484 GKELGNTAKRIEEF-LAQFQSLDETKEE--EDTSQSQSKGLQKTDLYHLQKSLLEMKELR 540

Query:    64 DSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLA 123
              +SKR     Q   E     + E+  S ++ +VR+Y+ P +  PLHE + F +  TL+  
Sbjct:   541 STSKR-----QTKFE----VLREQVVSFVDSLVREYLLPPDTQPLHETLYFSSAHTLRQH 591

Query:   124 LIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWY 182
             L   PR  +   L   Y  L+     RS    +P++  D  I Y L  E    INL DW 
Sbjct:   592 LNAAPRIALHTALNNPYYYLKNEAL-RSEEGCIPNVAPDICIAYKLHLECSRLINLVDWS 650

Query:   183 QSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRM 242
             ++F + V ++  K    S  S      ++ NE        I ARF +AV+EL++ G I+ 
Sbjct:   651 EAFAT-VVTAAEKMDANSVTS------EERNE-------IIHARFIRAVSELELLGFIK- 695

Query:   243 PTKRRPDFVQRVAFG 257
             PTK++ D V R+ +G
Sbjct:   696 PTKQKTDHVARLTWG 710

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q32PJ3 ORC3 "Origin recognition complex subunit 3" [Bos taurus (taxid:9913)]

 Score = 190 (71.9 bits), Expect = 7.4e-14, P = 7.4e-14
 Identities = 70/255 (27%), Positives = 119/255 (46%)

Query:     4 GRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMA 63
             G+ +    +++ +  +AQ   L +  EE   D ++  +K  +   +  L+      +++ 
Sbjct:   484 GKELGNTAKRIEEF-LAQFQSLDETKEE--EDTSQSQSKGLQKTDLYHLQKSLLEMKELR 540

Query:    64 DSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLA 123
              +SKR     Q   E     + E+  S ++ +VR+Y+ P +  PLHE + F +  TL+  
Sbjct:   541 STSKR-----QTKFE----VLREQVVSFVDSLVREYLLPPDTQPLHETLYFSSAHTLRQH 591

Query:   124 LIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWY 182
             L   PR  +   L   Y  L+     RS    +P++  D  I Y L  E    INL DW 
Sbjct:   592 LNAAPRIALHTALNNPYYYLKNEAL-RSEEGCIPNVAPDICIAYKLHLECSRLINLVDWS 650

Query:   183 QSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRM 242
             ++F + V ++  K    S  S       + NE        I ARF +AV+EL++ G I+ 
Sbjct:   651 EAFAT-VVTAAEKMDANSVTSG------ERNE-------IIHARFIRAVSELELLGFIK- 695

Query:   243 PTKRRPDFVQRVAFG 257
             PTK++ D V R+ +G
Sbjct:   696 PTKQKTDHVARLTWG 710

GO:0005664 "nuclear origin of replication recognition complex" evidence=ISS

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1S0E8 ORC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 189 (71.6 bits), Expect = 9.5e-14, P = 9.5e-14
 Identities = 67/244 (27%), Positives = 114/244 (46%)

Query:    21 QLYKLLKRWEELTVDIN--EIHAKLKELLSVIKLENGRSSRQDMADSSKRPVSRSQLN-- 76
             QL    K+ EE        ++ A+ KE       ++    + D+    K  +   +L   
Sbjct:   488 QLGNAAKKIEEFLAQFQSLDVKAEAKEEEDTSGSQSKGLQKTDLYHLQKSLLEMKELRRT 547

Query:    77 IEKESR--AVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQI 134
              +K+++   + E+  S I+ +VR+++ P E  PLHE++ F   + L+  L   PR  +  
Sbjct:   548 SKKQTKFEVLREQIVSFIDSLVREHLLPPETQPLHEVMYFSAAQALRQHLNAAPRIALHT 607

Query:   135 DLLESYKILRCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSR 193
              L   Y  L+     RS    +P++  D  I Y L  E    INL DW ++F + V ++ 
Sbjct:   608 ALNNPYYYLKNEAL-RSEEGCIPNVAPDICIAYKLHLECSRLINLVDWSEAFATVVTAAE 666

Query:   194 SKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQR 253
                  K   S +  + +  NE        I ARF +AV+EL++ G I+ PTK++ D V R
Sbjct:   667 -----KMDASSVTSEER--NE-------IIHARFIRAVSELELLGFIK-PTKQKTDHVAR 711

Query:   254 VAFG 257
             + +G
Sbjct:   712 LTWG 715

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

RGD|1308457 Orc3 "origin recognition complex, subunit 3" [Rattus norvegicus (taxid:10116)]

 Score = 188 (71.2 bits), Expect = 3.6e-13, P = 3.6e-13
 Identities = 59/175 (33%), Positives = 88/175 (50%)

Query:    84 VNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLALIGDPRRRIQIDLLESYKIL 143
             + E   + I+ +VRDY+ P E  PLHE+V F    TL+  L   PR  +   L   Y  L
Sbjct:   551 LRENVINFIDNLVRDYLLPPEGQPLHEVVYFSAANTLREHLNAAPRIALHTALNNPYYYL 610

Query:   144 RCSCCSRSGHSLLPSLH-DTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQ 202
             +     +S    +PS+  D  I Y L  E    INL DW ++F + V ++  K    S  
Sbjct:   611 KNEAL-KSEEGCIPSVAPDICIAYKLHLECSRLINLVDWSEAFAT-VVTAAEKMDTNSTV 668

Query:   203 SPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMPTKRRPDFVQRVAFG 257
             S      ++M+E        I ARF +AV+EL++ G I+ PTK++ D V R+ +G
Sbjct:   669 S------EEMSE-------IIHARFIRAVSELELLGFIK-PTKQKTDHVARLTWG 709

GO:0000808 "origin recognition complex" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA;ISO;ISS

GO:0006260 "DNA replication" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P1T5 ORC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 178 (67.7 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 68/254 (26%), Positives = 113/254 (44%)

Query:     4 GRLICQAVQKVRDLPIAQLYKLLKRWEELTVDINEIHAKLKELLSVIKLENGRSSRQDMA 63
             GR   + V+K+++  + Q  KL     E   + +E  +  KEL     L + + +  ++ 
Sbjct:   490 GREFDEIVEKLKEF-LTQFQKLEA---EAYQERDESISPQKELQKKTNLYHLQKTLLELK 545

Query:    64 DSSKRPVSRSQLNIEKESRAVNEKAASLIECMVRDYMQPVECSPLHEIVCFKNVETLQLA 123
             +S +   S+     E     +  +    I+ +VR Y+ P +   LHEIV F     L+  
Sbjct:   546 ESRR---SKKLTKFEM----LRFEVVDYIDSLVRHYLVPADHKTLHEIVYFNTASVLREH 598

Query:   124 LIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHDTSILYNLAQEHGDHINLHDWYQ 183
             L   PR  +   L   Y  L+       G S+     D  I Y L  E G  INL DW +
Sbjct:   599 LNAAPRIALHTALNNPYSYLKSEALKSDGGSISNKAPDICIAYKLHLECGRLINLADWLE 658

Query:   184 SFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTELQITGLIRMP 243
             +F + V ++         + P      D    D+  +  I ARF +AV+EL++ G I+ P
Sbjct:   659 AFSTVVTAA---------EGPTA----DAASSDQVDDV-IHARFIRAVSELELLGFIK-P 703

Query:   244 TKRRPDFVQRVAFG 257
             +K++ D V R+ +G
Sbjct:   704 SKQKTDHVARLTWG 717

GO:0003677 "DNA binding" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0005664 "nuclear origin of replication recognition complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00013958001	SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (664 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00030431001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (426 aa)				•	•	•	•		0.737
	GSVIVG00036984001	SubName- Full=Chromosome chr1 scaffold_84, whole genome shotgun sequence; (288 aa)					•	•	•		0.712
	GSVIVG00017884001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (524 aa)					•	•	•		0.705
	GSVIVG00014796001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (351 aa)					•	•	•		0.688
	GSVIVG00024619001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (810 aa)					•	•	•		0.603
	GSVIVG00018925001	SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (592 aa)				•		•	•		0.587
	GSVIVG00017548001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (527 aa)						•	•		0.577
	GSVIVG00024137001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (490 aa)				•		•	•		0.571
	GSVIVG00035072001	SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (608 aa)				•		•	•		0.562
	GSVIVG00036116001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (297 aa)						•	•		0.532

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
KOG2538	578	consensus Origin recognition complex, subunit 3 [R	100.0

>KOG2538 consensus Origin recognition complex, subunit 3 [Replication, recombination and repair]

Probab=100.00  E-value=2.6e-34  Score=278.56  Aligned_cols=158  Identities=33%  Similarity=0.496  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhCCC---CCCCCcceEEEecCchhhhHhhc-CChhhHHHHHhhchhhhhcCc--ccCCCCCC
Q 025081           81 SRAVNEKAASLIECMVRDYMQP---VECSPLHEIVCFKNVETLQLALI-GDPRRRIQIDLLESYKILRCS--CCSRSGHS  154 (258)
Q Consensus        81 ~~~~~~~~~~~l~~l~~~~l~p---~~~lpfhEif~~d~~~~L~~~l~-P~pR~~ie~aL~~p~~yL~~~--~~~~~~~~  154 (258)
                      -.+...+++.+++.+++.++-+   ++.-|+||++.|+...+++++|. +.||.++++++.||+.|++|+  ||...++.
T Consensus       414 f~~~~~k~v~l~e~~v~~~~l~~l~~~~~p~~e~l~f~~~~tl~q~l~s~~~RsalhTa~n~P~yyl~~e~~a~e~~~g~  493 (578)
T KOG2538|consen  414 FEARLLKYVSLIEILVSQSHLSGLNNDIRPVHEVLRFSSISTLRQMLKSGANRSALHTALNDPVYYLHPEMRAVEAADGR  493 (578)
T ss_pred             HHHHHHHHhhHHHHHHHHhhccccccchhhHHHHHhcCchHHHHHHHhcccchhHHHHhhcCceeecccHHhhHhhhcCC
Confidence            4566778999999999888765   78899999999999999999998 999999999999999999999  88755554


Q ss_pred             C-CCCcchHHHHHHHHHHhCCcccHHHHHHHHHhhhcCcccccCCCCCCCCCcccccCCCCCCChhhHHHHHHHHHHHHH
Q 025081          155 L-LPSLHDTSILYNLAQEHGDHINLHDWYQSFKSKVCSSRSKGKHKSKQSPLPKKRKDMNEPDKPCEASIQARFCKAVTE  233 (258)
Q Consensus       155 ~-~~s~Pd~silYkLY~EaG~lINlyDw~~AF~~~l~~~~~~~~~~~k~~~~~kK~k~~~e~~~~~e~~~qArF~rAv~E  233 (258)
                      + .+..||+||+||||+|||++||+||||+||.+++.....  +               .....+.+..+|+||+|||+|
T Consensus       494 l~~~~aPdl~i~yKL~~E~~~liNl~Dw~~AF~e~l~~~~~--E---------------~~n~~~~dP~~~~rF~raV~e  556 (578)
T KOG2538|consen  494 LLLPNAPDLSILYKLYLECGRLINLYDWYIAFREVLLENDR--E---------------YMNPEESDPQIQIRFFRAVDE  556 (578)
T ss_pred             cccCcCchHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhh--h---------------hccccccCHHHHHHHHHHHHH
Confidence            4 468999999999999999999999999999999982210  0               001234567899999999999


Q ss_pred             HHHcCcccCCCCCCcceeeeecc
Q 025081          234 LQITGLIRMPTKRRPDFVQRVAF  256 (258)
Q Consensus       234 L~~lGfIK~~skrK~DhV~K~~W  256 (258)
                      ||+||+|| ||+||+|||+|++|
T Consensus       557 Lq~lG~IK-pss~KtDhv~k~~w  578 (578)
T KOG2538|consen  557 LQFLGLIK-PSSRKTDHVLKLTW  578 (578)
T ss_pred             HHhccccC-ccccchHHHHHhcC
Confidence            99999999 69999999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 8e-08
 Identities = 41/280 (14%), Positives = 93/280 (33%), Gaps = 62/280 (22%)

Query: 13  KVRDLP----------IAQLYKLLK----RWEE-LTVDINEIHAKLKELLSVIKLENGRS 57
           + +DLP          ++ + + ++     W+    V+ +++   ++  L+V++    R 
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK 373

Query: 58  SRQDMA---DSSKRPVSRSQL----NIEKESRAVNEK--AASLIECMVRDYMQPVECSPL 108
               ++    S+  P     L     I+ +   V  K    SL+E   ++         +
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST-----ISI 428

Query: 109 HEIVCFKNVETLQLALIGDPRRRIQIDLLESYKILRCSCCSRSGHSLLPSLHD----TSI 164
             I        L+L +  +    +   +++ Y I +          L+P   D    + I
Sbjct: 429 PSI-------YLELKVKLENEYALHRSIVDHYNIPKTFDS----DDLIPPYLDQYFYSHI 477

Query: 165 LYNLAQ-EHGDHINL-HDWYQSF---KSKVCSSRSKGKHKSKQSP----LPKKRKDMNEP 215
            ++L   EH + + L    +  F   + K+    +              L   +  + + 
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN 537

Query: 216 DKPCEASIQA--RFCKAVTELQITGLIRMPTKRRPDFVQR 253
           D   E  + A   F   + E     LI        D ++ 
Sbjct: 538 DPKYERLVNAILDFLPKIEE----NLICSKYT---DLLRI 570

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00