Citrus Sinensis ID: 025156

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MIFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Secondary Structure (PSIPRED)
ccHHHHcccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccEEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEHccccHHccccccEEEEEcccccccccccccccccccccEEccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccHcHccccccHHHccccccccHHHHHHHccccc
Coil and Loop (DISEMBL)
MIFIREISDLalygekewyfftprdrkypngsrpnraagsgywkatgadkpigqpkpvgIKKALVFYagkapkgektnWIMHEYRLAdvdrsarkknslrlDDWVLCRIYnkkgsiekqqqvtnrrpnfteteteteekkpvvmpsgmdtstsggallpnpastvtgtgtvndymyfdtsdsvpklntdsscsehvvspeftcevqsepkmqpwentlgfpynyldsamdisfnsqlqgnnqlsplqdmfmyftkpf
Flexible Loop (DISEMBL)
mifireisdlalygekewyfftprdrkypngsrpnraagsgywkatgadkpigqpkpVGIKKALVFYAGkapkgektnwiMHEYRladvdrsarkknslrlddwvLCRIYnkkgsiekqqqvtnrrpnfteteteteekkpvvmpsGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Low Complexity Region (SEG)
MIFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFteteteteeKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Disordered region (IsUnstruct)
*IFIREISDLALYGEKEWYFFTPR*****************YWKA**********KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNK******************************************************GTGTVNDYMYFD**********************************PWENTLGFPYNYLDSAMDISFN**************MFMYF****
Disordered Region (DISOPRED)
MIFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL****************DWVLCRIYN***************************************************************MYFDT*********************************************L*******************PLQDMFMYFTKP*
Disordered Region (DISEMBL)
MIFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSI*************************VVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVP*************SPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Disordered Region (DISPRO)
MIFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS*****SLRLDDWVLCRIYNKKG******************************************************************DSV****TDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q39013	289	NAC domain-containing pro	yes	no	0.859	0.764	0.614	4e-82
Q7F2L3	303	NAC domain-containing pro	yes	no	0.953	0.808	0.589	3e-76
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.727	0.660	0.547	4e-57
Q8H115	312	NAC domain-containing pro	no	no	0.618	0.509	0.543	4e-55
Q53NF7	329	NAC domain-containing pro	no	no	0.945	0.738	0.451	3e-52
Q52QH4	318	NAC domain-containing pro	no	no	0.463	0.374	0.685	3e-44
Q9C932	317	NAC domain-containing pro	no	no	0.412	0.334	0.727	4e-41
Q9LDY8	317	NAC domain-containing pro	no	no	0.412	0.334	0.727	5e-41
Q93VY3	297	NAC domain-containing pro	no	no	0.424	0.367	0.736	2e-40
A0SPJ6	396	NAC transcription factor	N/A	no	0.447	0.290	0.619	6e-39

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  304 bits (779), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 166/270 (61%), Positives = 189/270 (70%), Gaps = 49/270 (18%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           E+  LALYGEKEWYFF+PRDRKYPNGSRPNR+AGSGYWKATGADKPIG PKPVGIKKALV
Sbjct: 51  ELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSAR-KKNSLRLDDWVLCRIYNKKGSIEKQ----- 119
           FYAGKAPKGEKTNWIMHEYRLADVDRS R KKNSLRLDDWVLCRIYNKKG+ E++     
Sbjct: 111 FYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPPPP 170

Query: 120 ----QQVTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYM 175
                ++   +P  TE          +VMP             P P  T       +++ 
Sbjct: 171 VVYGDEIMEEKPKVTE----------MVMP-------------PPPQQT-------SEFA 200

Query: 176 YFDTSDSVPKLN-TDSSCSEHVVSPEFTCEVQSEPKMQPWE-------NTLGFPYNYLDS 227
           YFDTSDSVPKL+ TDSSCSE VVSPEFT EVQSEPK + W        NTL F +NY+D+
Sbjct: 201 YFDTSDSVPKLHTTDSSCSEQVVSPEFTSEVQSEPKWKDWSAVSNDNNNTLDFGFNYIDA 260

Query: 228 AMDISFNSQLQGNNQLSPLQDMFMYFTKPF 257
            +D +F      +NQ+ PLQDMFMY  KP+
Sbjct: 261 TVDNAFGGG-GSSNQMFPLQDMFMYMQKPY 289

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score =  285 bits (729), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 152/258 (58%), Positives = 178/258 (68%), Gaps = 13/258 (5%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  +ALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKP+G PKPV IKKALV
Sbjct: 53  QLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKALV 112

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNR 125
           FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG +EK       
Sbjct: 113 FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAAVA 172

Query: 126 RPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDT-SDSVP 184
                 +     ++KP+V   G++ + S     P     V G    +   Y+D  SDS+P
Sbjct: 173 AAGMVSSGGGV-QRKPMV---GVNAAVSSP---PEQKPVVAGPAFPDLAAYYDRPSDSMP 225

Query: 185 KLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGF--PYNYLDSAMDISFNSQLQGNNQ 242
           +L+ DSSCSE V+SPEF CEVQS+PK+  WE T     P N   S +D + +  L G   
Sbjct: 226 RLHADSSCSEQVLSPEFACEVQSQPKISEWERTFATVGPINPAASILDPAGSGGLGGLGG 285

Query: 243 LSP---LQDMFMYFTKPF 257
                 LQD+ MY+ KPF
Sbjct: 286 GGSDPLLQDILMYWGKPF 303

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score =  221 bits (563), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/234 (54%), Positives = 146/234 (62%), Gaps = 47/234 (20%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           E+ +++LYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKALV
Sbjct: 51  ELPEMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 123
           FYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK     
Sbjct: 111 FYAGKAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEK----- 165

Query: 124 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 183
                                              P      T T        FDTSDS 
Sbjct: 166 ---------------------------------YFPADEKPRTTTMAEQSSSPFDTSDST 192

Query: 184 -PKLNTDSSCSE----HVVSPEFTCEVQSEPKMQPWENTL-GFPYNYLDSAMDI 231
            P L  D S S     HVVSP+   EVQSEPK    E+ L  F  +   S+M++
Sbjct: 193 YPTLQEDDSSSSGGHGHVVSPD-VLEVQSEPKWGELEDALEAFDTSMFGSSMEL 245

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/219 (54%), Positives = 137/219 (62%), Gaps = 60/219 (27%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           E+ ++ALYGEKEWYFF+ RDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKALV
Sbjct: 94  ELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALV 153

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 123
           FYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK     
Sbjct: 154 FYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEK----- 208

Query: 124 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 183
                               +P+  +  T                          TSDS 
Sbjct: 209 -------------------YLPAAAEKPTEK----------------------MSTSDS- 226

Query: 184 PKLNTDSSCSEHVVSPEFTC----EVQSEPKMQPWENTL 218
                   CS HV+SP+ TC    EV+SEPK    E+ L
Sbjct: 227 -------RCSSHVISPDVTCSDNWEVESEPKWINLEDAL 258

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|Q53NF7|NAC71_ORYSJ NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1

 Score =  205 bits (521), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/286 (45%), Positives = 158/286 (55%), Gaps = 43/286 (15%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++ + A+ GEKEWYFF+PRDRKYPNG RPNRAAG+GYWKATGADKP+G P+ V IKKALV
Sbjct: 53  DLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIKKALV 112

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKK-------NSLRLDDWVLCRIYNKKGSIEK 118
           FYAGK PKG KTNWIMHEYRLADVDRSA  +       N+LRLDDWVLCRIYNKKG IE+
Sbjct: 113 FYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVIER 172

Query: 119 QQQV---TNRRPNFTETETETEEKKPVVMPSGMDTSTSG-GALLPNPASTVTGTGTVNDY 174
              V    + +P       +          + M    S  G     P S +         
Sbjct: 173 YDTVDAGEDVKPAAAAAAAKGGRIGGGGGAAAMKVELSDYGFYDQEPESEM--------- 223

Query: 175 MYFDTS-----DSVPKLNTDSSCSEHVVSPEFTCE------VQSEPKMQPWENTLGFPYN 223
           + FD S     DS+P+L+TDSS SEHV+SP  + +           + QP     G+P  
Sbjct: 224 LCFDRSGSADRDSMPRLHTDSSGSEHVLSPSPSPDDFPGGGDHDYAESQPSGGCGGWPGV 283

Query: 224 YLDSAMDISF--NSQL----------QGNNQLSPLQDMFMYFTKPF 257
              +  D  F  +S L          +     +   DMF Y  KPF
Sbjct: 284 DWAAVGDDGFVIDSSLFELPSPAAFSRAAGDGAAFGDMFTYLQKPF 329

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  178 bits (452), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/127 (68%), Positives = 102/127 (80%), Gaps = 8/127 (6%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI---GQPKPVGIKK 62
           ++ + AL+G KEWYFFTPRDRKYPNGSRPNRAAG GYWKATGADKP+   G  + VGIKK
Sbjct: 65  DLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKK 124

Query: 63  ALVFYAGKAPKGEKTNWIMHEYRLADVDRS-ARKKNSLRLDDWVLCRIYNKKGSIEK--- 118
           ALVFY+GKAP+G KT+WIMHEYRLAD DR+   KK S +LD+WVLCR+YNKK + EK   
Sbjct: 125 ALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKL 184

Query: 119 -QQQVTN 124
            QQ V +
Sbjct: 185 EQQDVAS 191

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  168 bits (425), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 80/110 (72%), Positives = 90/110 (81%), Gaps = 4/110 (3%)

Query: 11  ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAG 69
           AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY G
Sbjct: 63  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG 122

Query: 70  KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 119
           KAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct: 123 KAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQ 169

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  167 bits (424), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 80/110 (72%), Positives = 90/110 (81%), Gaps = 4/110 (3%)

Query: 11  ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAG 69
           AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY G
Sbjct: 63  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIG 122

Query: 70  KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 119
           KAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct: 123 KAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQTSAQKQ 169

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 91/114 (79%), Gaps = 5/114 (4%)

Query: 11  ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAG 69
           AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFYAG
Sbjct: 63  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAG 122

Query: 70  KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 123
           KAPKG KTNWIMHEYRL +  RS     S +LDDWVLCRIY KK S  ++Q VT
Sbjct: 123 KAPKGTKTNWIMHEYRLIEHSRS---HGSSKLDDWVLCRIY-KKTSGSQRQAVT 172

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  160 bits (406), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 83/134 (61%), Positives = 94/134 (70%), Gaps = 19/134 (14%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GQPKPVGI 60
           E+ + A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKPI     G+ K VG+
Sbjct: 72  ELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREK-VGV 130

Query: 61  KKALVFYAGKAPKGEKTNWIMHEYRLADVDRSA-----------RKKNSLRLDDWVLCRI 109
           KKALVFY GK PKG KTNWIMHEYRL D   SA            +  SLRLDDWVLCRI
Sbjct: 131 KKALVFYRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRI 190

Query: 110 YNK--KGSIEKQQQ 121
           Y K  K +   QQ+
Sbjct: 191 YKKINKAAAGDQQR 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
224063050	291	NAC domain protein, IPR003441 [Populus t	0.922	0.814	0.737	1e-103
255558632	369	NAC domain-containing protein, putative	0.926	0.644	0.721	1e-102
333696916	291	nam-like protein [Corylus heterophylla]	0.937	0.828	0.714	1e-100
427199350	294	nac family transcription factor 5 [Morel	0.945	0.826	0.723	1e-99
206584339	299	NAC domain protein NAC2 [Gossypium hirsu	0.933	0.802	0.707	5e-98
224084914	279	NAC domain protein, IPR003441 [Populus t	0.883	0.813	0.707	1e-97
242877145	291	NAC family transcription factor 5 [Cicer	0.929	0.821	0.696	2e-96
359806256	300	NAC domain-containing protein 2-like [Gl	0.957	0.82	0.679	3e-94
206584343	298	NAC domain protein NAC3 [Gossypium hirsu	0.902	0.778	0.679	2e-91
351726451	299	NAC domain protein NAC2 [Glycine max] gi	0.941	0.809	0.68	5e-91

>gi|224063050|ref|XP_002300972.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222842698|gb|EEE80245.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/255 (73%), Positives = 211/255 (82%), Gaps = 18/255 (7%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  +ALYGEKEWYFFTPRDRKYPNGSRPNRAAG GYWKATGADKPIGQPK VGIKKALV
Sbjct: 52  DLPGIALYGEKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPIGQPKTVGIKKALV 111

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQ-VTN 124
           FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG++EKQ+Q ++ 
Sbjct: 112 FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTVEKQEQHLSV 171

Query: 125 RRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVP 184
           ++ N   TE E +EKK VV             LLP P +  + TGTVNDYMYFDTSDSVP
Sbjct: 172 KKAN--PTEIEEDEKKQVV-------------LLPPPQAPSSATGTVNDYMYFDTSDSVP 216

Query: 185 KLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENT--LGFPYNYLDSAMDISFNSQLQGNNQ 242
           +++TDSSCSEHVVSPEFTCEVQSEP+ + W N   L  PYNYLD+ MDI F SQLQG+NQ
Sbjct: 217 RMHTDSSCSEHVVSPEFTCEVQSEPRWKEWGNVNALDNPYNYLDATMDIPFASQLQGDNQ 276

Query: 243 LSPLQDMFMYFTKPF 257
           +SPLQD+FM+  KPF
Sbjct: 277 MSPLQDIFMHLQKPF 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558632|ref|XP_002520341.1| NAC domain-containing protein, putative [Ricinus communis] gi|223540560|gb|EEF42127.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/255 (72%), Positives = 208/255 (81%), Gaps = 17/255 (6%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  +ALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV
Sbjct: 129 DLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 188

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNR 125
           FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+IEKQ Q++N+
Sbjct: 189 FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTIEKQGQLSNK 248

Query: 126 RPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPK 185
           +          E+KKP +M              P PA + +GTGT ND++YF++SDSVPK
Sbjct: 249 KIINYSPSNIIEDKKPEIM-------------APPPAPS-SGTGTANDFVYFESSDSVPK 294

Query: 186 LNTDSSCSEHVVSPEFTCEVQSEPKMQPWE---NTLGFPYNYLDSAMDISFNSQLQGNNQ 242
           L+TDSSCSEHVVSPEFTCEVQSEPK + W    N L FP+NY+D +MD +F SQ Q NNQ
Sbjct: 295 LHTDSSCSEHVVSPEFTCEVQSEPKWKDWGSNVNALDFPFNYMDGSMDSAFASQFQNNNQ 354

Query: 243 LSPLQDMFMYFTKPF 257
           +SPLQDMFMY  KPF
Sbjct: 355 MSPLQDMFMYLQKPF 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|333696916|gb|AEF80001.1| nam-like protein [Corylus heterophylla]

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/252 (71%), Positives = 207/252 (82%), Gaps = 11/252 (4%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           E+  +ALYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG PK +GIKKALV
Sbjct: 51  ELPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKAMGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNR 125
           FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+ EKQQQ  N 
Sbjct: 111 FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTTEKQQQGINL 170

Query: 126 RPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPK 185
           +     +++E E+KKP  +  G  TS    A+L  PA+T T  G  +DY+YFDTSDSVP+
Sbjct: 171 Q---KMSDSEMEDKKPENLTIGGATS----AILSGPAATRTAAG--DDYVYFDTSDSVPR 221

Query: 186 LNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSP 245
           L+TDSSCSEHVVSPEFTCEVQSEPK   WE T+ + +NY+D+ +D  F +Q Q +NQ+SP
Sbjct: 222 LHTDSSCSEHVVSPEFTCEVQSEPKC--WEKTIDYHFNYMDATLDNGFGAQFQSSNQMSP 279

Query: 246 LQDMFMYFTKPF 257
           LQDMFMY  KPF
Sbjct: 280 LQDMFMYMQKPF 291

Source: Corylus heterophylla

Species: Corylus heterophylla

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|427199350|gb|AFY26893.1| nac family transcription factor 5 [Morella rubra]

 Score =  368 bits (945), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 183/253 (72%), Positives = 200/253 (79%), Gaps = 10/253 (3%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           E+  +ALYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG PK VGIKKALV
Sbjct: 51  ELPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKAVGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK-QQQVTN 124
           FYAGKAP+GEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+IEK QQQ+ N
Sbjct: 111 FYAGKAPRGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTIEKQQQQIIN 170

Query: 125 RRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVP 184
           RR N      ETEEKKP ++ +G  T             +      VNDY YFDTSDSVP
Sbjct: 171 RRMN----SFETEEKKPEILTNGGTTPAPLLPAP---PPSAVPKAAVNDYTYFDTSDSVP 223

Query: 185 KLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLS 244
           +L+TDSSCSEHVVSPEFTCEVQSEPK   WE  + F +NY+D+  D  F SQ Q NNQLS
Sbjct: 224 RLHTDSSCSEHVVSPEFTCEVQSEPKY--WEKPMDFSFNYMDATFDNGFGSQFQSNNQLS 281

Query: 245 PLQDMFMYFTKPF 257
           PLQDMFMY  KPF
Sbjct: 282 PLQDMFMYLQKPF 294

Source: Morella rubra

Species: Morella rubra

Genus: Morella

Family: Myricaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|206584339|gb|ACI15342.1| NAC domain protein NAC2 [Gossypium hirsutum] gi|206584351|gb|ACI15348.1| NAC domain protein NAC2 [Gossypium hirsutum]

 Score =  363 bits (931), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 184/260 (70%), Positives = 204/260 (78%), Gaps = 20/260 (7%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++ DLALYGE+EWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV
Sbjct: 52  DLPDLALYGEEEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 111

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNR 125
           FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+IEKQ    + 
Sbjct: 112 FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQSPQGSI 171

Query: 126 RPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPK 185
               +   TE E+KKP +   G+DT       LP P      TG  NDY+YFDTS+SVP+
Sbjct: 172 --GKSSAVTEIEDKKPDIATLGVDTRQ-----LPPPP-----TGLGNDYVYFDTSESVPR 219

Query: 186 LNTDSSCSEHVVSPEFTCEVQSEPKMQPW--------ENTLGFPYNYLDSAMDISFNSQL 237
           L+TDSSCSEHVVSPEFTCEVQSEP+ + W         N L FPYNY+D+ +D  F +  
Sbjct: 220 LHTDSSCSEHVVSPEFTCEVQSEPQWKDWGSATNTTTTNALDFPYNYMDATVDNGFPAHF 279

Query: 238 QGNNQLSPLQDMFMYFTKPF 257
           Q NNQLSPLQDMFMY  KPF
Sbjct: 280 QSNNQLSPLQDMFMYLQKPF 299

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084914|ref|XP_002307447.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222856896|gb|EEE94443.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 179/253 (70%), Positives = 198/253 (78%), Gaps = 26/253 (10%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  +ALYGEKEWYFFTPRDRKYPNGSRPNRAAG GYWKATGADKPIGQPK  GIKKALV
Sbjct: 52  DLPGMALYGEKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPIGQPKTAGIKKALV 111

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ-QQVTN 124
           FYAGKAPKGEKTNWIMHEYRLA+VDRS RKKNSLRLDDWVLCRI+NKKG+IEKQ Q ++ 
Sbjct: 112 FYAGKAPKGEKTNWIMHEYRLAEVDRSVRKKNSLRLDDWVLCRIHNKKGTIEKQGQHLSV 171

Query: 125 RRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVP 184
           ++ N +    E +EKK VVM             LP P    + TGTVNDY+YFDTSDSVP
Sbjct: 172 QKANSSTEIAEEDEKKSVVM-------------LPPPPGPSSATGTVNDYVYFDTSDSVP 218

Query: 185 KLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLS 244
           +L+TDSSCSEHVVSPEFTCEVQS             PYNYLD+ MDI F SQ QGN+Q+S
Sbjct: 219 RLHTDSSCSEHVVSPEFTCEVQSN------------PYNYLDATMDIPFASQFQGNHQMS 266

Query: 245 PLQDMFMYFTKPF 257
           PLQDMFMY  KPF
Sbjct: 267 PLQDMFMYLQKPF 279

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242877145|gb|ACS94038.1| NAC family transcription factor 5 [Cicer arietinum]

 Score =  358 bits (918), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 177/254 (69%), Positives = 199/254 (78%), Gaps = 15/254 (5%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  +A YGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIG PKPVGIKKALV
Sbjct: 51  DLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQ--VT 123
           FYAGKAPKG+KTNWIMHEYRLADVDRS R+KNSLRLDDWVLCRIYNKKG+IEKQ    V 
Sbjct: 111 FYAGKAPKGDKTNWIMHEYRLADVDRSIRRKNSLRLDDWVLCRIYNKKGTIEKQPNSGVI 170

Query: 124 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 183
           NR+ +     +E E+KKP ++       T G  L P+P      T  + DYMYFDTSDS+
Sbjct: 171 NRKTD----PSEIEDKKPEIL-------TRGSGLPPHPPP--QATAGMRDYMYFDTSDSI 217

Query: 184 PKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQL 243
           PKL+TDSSCSEHVVSPEF  EVQSEPK   WE  L FPYNY+D+ ++  F SQ Q NNQ+
Sbjct: 218 PKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKHLEFPYNYVDTTLNSGFGSQFQSNNQM 277

Query: 244 SPLQDMFMYFTKPF 257
           SPLQDMFMY  K F
Sbjct: 278 SPLQDMFMYLPKTF 291

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806256|ref|NP_001240958.1| NAC domain-containing protein 2-like [Glycine max] gi|187940277|gb|ACD39369.1| NAC domain protein [Glycine max]

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/256 (67%), Positives = 201/256 (78%), Gaps = 10/256 (3%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  LA YGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG PKPVGIKKALV
Sbjct: 51  DLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNR 125
           FYAGKAPKG+K+NWIMHEYRLADVDRS RKKNSLRLDDWVLCRIYNKKG+IEK Q  ++ 
Sbjct: 111 FYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKFQPSSDV 170

Query: 126 RPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPK 185
             +     +E E++KP ++ SG      GG LLP             DYMYFD SDS+PK
Sbjct: 171 VVSRKMESSEIEDRKPEILKSG------GGCLLPPVPPPQAKAAVKKDYMYFDPSDSIPK 224

Query: 186 LNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMD--ISFNSQLQGNNQ- 242
           L+TDSSCSEHVVSPEF  EVQSEPK + WE +L FP+NY+D+ ++   SF +Q QGNNQ 
Sbjct: 225 LHTDSSCSEHVVSPEFASEVQSEPKWKEWEKSLEFPFNYVDATLNNSNSFTTQFQGNNQM 284

Query: 243 LSPLQDMFMYF-TKPF 257
           +SPLQDMFMY+  KPF
Sbjct: 285 MSPLQDMFMYWPNKPF 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|206584343|gb|ACI15344.1| NAC domain protein NAC3 [Gossypium hirsutum] gi|206584353|gb|ACI15349.1| NAC domain protein NAC3 [Gossypium hirsutum]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 180/265 (67%), Positives = 198/265 (74%), Gaps = 33/265 (12%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++ DLALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV
Sbjct: 54  DLPDLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 113

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ---QQV 122
           FY+GKAPKGEKTNWIMHEYRLADVDRS RKKNSLRLDDWVLCRIYNKKG IEKQ     V
Sbjct: 114 FYSGKAPKGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGCIEKQPPRGSV 173

Query: 123 TNRRPNFTETETETEEKKPVVMPSGMDTSTSG--GALLPNPASTVTGTGTVNDYMYFDTS 180
           T +      + TE EE KP       D  T G      P PA+T  G    NDY+YFD+S
Sbjct: 174 TKK-----ASVTEIEESKP-------DNGTLGVEACEFP-PAATAVG----NDYVYFDSS 216

Query: 181 DSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLG--------FPYNYLDSAMDIS 232
           +SVP+++TDSSCSEH VS EF  EVQS PK   W+  LG        F YNYLD+ MDI 
Sbjct: 217 ESVPRVHTDSSCSEHAVSREFMTEVQSVPK---WKEELGMANNNALDFAYNYLDTNMDIG 273

Query: 233 FNSQLQGNNQLSPLQDMFMYFTKPF 257
           F SQ+Q +NQLSP QD+FMY  KPF
Sbjct: 274 FASQMQSSNQLSPYQDIFMYLQKPF 298

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726451|ref|NP_001236871.1| NAC domain protein NAC2 [Glycine max] gi|62546185|gb|AAX85979.1| NAC2 protein [Glycine max] gi|66394512|gb|AAY46122.1| NAC domain protein NAC2 [Glycine max]

 Score =  340 bits (871), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 170/250 (68%), Positives = 196/250 (78%), Gaps = 8/250 (3%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
           ++  LA YGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIGQPKPVGIKKALV
Sbjct: 51  DLPGLATYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKALV 110

Query: 66  FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNR 125
           FYAGKAPKG+K+NWIMHEYRLADVDRS RKKN+LRLDDWVLCRIYNKKG+IEK Q  ++ 
Sbjct: 111 FYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNTLRLDDWVLCRIYNKKGTIEKLQPSSDV 170

Query: 126 RPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTV-NDYMYFDTSDSVP 184
             +     +E E++KP ++ SG      GG L P          T   DYMYFD SDS+P
Sbjct: 171 AHSRNIESSEIEDRKPEILKSG------GGCLPPPAPVPAPPQATAKTDYMYFDPSDSIP 224

Query: 185 KLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQ-L 243
           KL+TDSSCSE VVSP F  EVQSEPK   WE +L FP+NY+D+ ++ SF +Q QGNNQ L
Sbjct: 225 KLHTDSSCSEQVVSPGFASEVQSEPKWNEWEKSLEFPFNYVDATLNNSFMAQFQGNNQML 284

Query: 244 SPLQDMFMYF 253
           SPLQDMFMY+
Sbjct: 285 SPLQDMFMYW 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.447	0.454	0.878	3.7e-64
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.443	0.394	0.895	9.9e-55
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.813	0.738	0.517	8.9e-54
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.544	0.448	0.704	5.6e-52
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.412	0.334	0.727	2e-40
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.412	0.334	0.727	2e-40
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.424	0.347	0.736	8.7e-40
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.428	0.343	0.658	1.6e-38
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.428	0.340	0.652	3e-37
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.424	0.299	0.639	8e-37

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
 Identities = 101/115 (87%), Positives = 110/115 (95%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
             ++ D+ALYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PKPVGIKKALV
Sbjct:    54 DLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPVGIKKALV 113

Query:    66 FYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQ 120
             FY+GK P GEKTNWIMHEYRLADVDRS RKKNSLRLDDWVLCRIYNKKG IEK++
Sbjct:   114 FYSGKPPNGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVIEKRR 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 103/115 (89%), Positives = 109/115 (94%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
             E+  LALYGEKEWYFF+PRDRKYPNGSRPNR+AGSGYWKATGADKPIG PKPVGIKKALV
Sbjct:    51 ELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKALV 110

Query:    66 FYAGKAPKGEKTNWIMHEYRLADVDRSARKK-NSLRLDDWVLCRIYNKKGSIEKQ 119
             FYAGKAPKGEKTNWIMHEYRLADVDRS RKK NSLRLDDWVLCRIYNKKG+ E++
Sbjct:   111 FYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERR 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 118/228 (51%), Positives = 149/228 (65%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
             E+ +++LYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKALV
Sbjct:    51 ELPEMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALV 110

Query:    66 FYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEK----- 118
             FYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK     
Sbjct:   111 FYAGKAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFPAD 170

Query:   119 -QQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDTSTSGG---ALLPNPASTVTGT--GTVN 172
              + + T                 P +     D+S+SGG    + P+     +    G + 
Sbjct:   171 EKPRTTTMAEQSSSPFDTSDSTYPTLQED--DSSSSGGHGHVVSPDVLEVQSEPKWGELE 228

Query:   173 DYMY-FDTS---DSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWEN 216
             D +  FDTS    S+  L  D+   + +   ++    Q  P+ +P+ N
Sbjct:   229 DALEAFDTSMFGSSMELLQPDAFVPQFLYQSDYFTSFQDPPEQKPFLN 276

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 100/142 (70%), Positives = 113/142 (79%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALV 65
             E+ ++ALYGEKEWYFF+ RDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKALV
Sbjct:    94 ELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALV 153

Query:    66 FYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 123
             FYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK     
Sbjct:   154 FYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAA 213

Query:   124 NRRPNFXXXXXXXXXKKPVVMP 145
               +P              V+ P
Sbjct:   214 AEKPTEKMSTSDSRCSSHVISP 235

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 80/110 (72%), Positives = 90/110 (81%)

Query:    11 ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAG 69
             AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY G
Sbjct:    63 ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG 122

Query:    70 KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 119
             KAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct:   123 KAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQ 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 80/110 (72%), Positives = 90/110 (81%)

Query:    11 ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAG 69
             AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY G
Sbjct:    63 ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIG 122

Query:    70 KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 119
             KAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct:   123 KAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQTSAQKQ 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 84/114 (73%), Positives = 91/114 (79%)

Query:    11 ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAG 69
             AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFYAG
Sbjct:    80 ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAG 139

Query:    70 KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 123
             KAPKG KTNWIMHEYRL +  RS     S +LDDWVLCRIY KK S  ++Q VT
Sbjct:   140 KAPKGTKTNWIMHEYRLIEHSRS---HGSSKLDDWVLCRIY-KKTSGSQRQAVT 189

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 79/120 (65%), Positives = 90/120 (75%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GQPKPVGI 60
             E+   A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKP+     G  K VG+
Sbjct:    61 ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGV 120

Query:    61 KKALVFYAGKAPKGEKTNWIMHEYRLAD-----VDRSARKKNSLRLDDWVLCRIYNKKGS 115
             KKALVFY+GK PKG K++WIMHEYRL D     +     KKNSLRLDDWVLCRIY K  S
Sbjct:   121 KKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNS 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 79/121 (65%), Positives = 86/121 (71%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG--QPKPVGIKKA 63
             E+   A +GE EWYFF+PRDRKYPNG RPNRAA SGYWKATG DKPI       VG+KKA
Sbjct:    60 ELPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKA 119

Query:    64 LVFYAGKAPKGEKTNWIMHEYRLAD---------VDRSARKKNSLRLDDWVLCRIYNKKG 114
             LVFY GK PKG KT+WIMHEYRL D          D +  +KNSLRLDDWVLCRIY K  
Sbjct:   120 LVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNS 179

Query:   115 S 115
             S
Sbjct:   180 S 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 78/122 (63%), Positives = 91/122 (74%)

Query:     6 EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI----GQPKPVGIK 61
             E+   A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKP+    G  K VG+K
Sbjct:    61 ELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQK-VGVK 119

Query:    62 KALVFYAGKAPKGEKTNWIMHEYRLADVDRSAR--------KKNSLRLDDWVLCRIYNKK 113
             KALVFY+GK PKG K++WIMHEYRL +   + R        KKNSLRLDDWVLCRIY K 
Sbjct:   120 KALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKN 179

Query:   114 GS 115
              +
Sbjct:   180 NA 181

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39013	NAC2_ARATH	No assigned EC number	0.6148	0.8599	0.7647	yes	no
Q7F2L3	NAC48_ORYSJ	No assigned EC number	0.5891	0.9533	0.8085	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC030 NAC domain protein, IPR003441 (291 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-46

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  151 bits (384), Expect = 1e-46
 Identities = 55/76 (72%), Positives = 64/76 (84%), Gaps = 2/76 (2%)

Query: 14  GEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI--GQPKPVGIKKALVFYAGKA 71
           G++EWYFF+PRDRKYPNGSR NRA GSGYWKATG DKP+     + VG+KK LVFY G+A
Sbjct: 55  GDREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRA 114

Query: 72  PKGEKTNWIMHEYRLA 87
           PKGEKT+W+MHEYRL 
Sbjct: 115 PKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	99.9

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=99.90  E-value=8e-25  Score=178.14  Aligned_cols=86  Identities=56%  Similarity=1.122  Sum_probs=64.5

Q ss_pred             CCcccccccccCCCceEEEeccCCCCCCCCCCCcccccCccccccCCccccc--CCcceEEEEEEeeeeccCCCCcccCe
Q 025156            2 IFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG--QPKPVGIKKALVFYAGKAPKGEKTNW   79 (257)
Q Consensus         2 ~~P~dLPg~al~gekeWYFFSpr~rKy~nG~R~nRatg~GyWK~tG~~k~I~--~gk~VG~KKtLvFY~Gk~p~g~KT~W   79 (257)
                      .+||+||+....++++||||+++.+++.+|.|.+|++++|+||.+|++++|.  ++++||+|++|+||.++.+++.+|+|
T Consensus        42 ~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W  121 (129)
T PF02365_consen   42 AHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGW  121 (129)
T ss_dssp             S-GGGCHHHSSS-SSEEEEEEE----------S-EEETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEE
T ss_pred             cChHHhhhhccCCCceEEEEEecccccCCcccccccccceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCe
Confidence            4799999543446779999999999999999999999999999999999996  57899999999999998899999999


Q ss_pred             EEeEEEec
Q 025156           80 IMHEYRLA   87 (257)
Q Consensus        80 vMhEYrL~   87 (257)
                      +||||+|.
T Consensus       122 ~M~EY~L~  129 (129)
T PF02365_consen  122 VMHEYSLE  129 (129)
T ss_dssp             EEEEEEE-
T ss_pred             EEEEEEeC
Confidence            99999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		1e-40
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		1e-40
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-40

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
Query: 11  ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAG 69
           AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY G
Sbjct: 69  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG 128
Query: 70  KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 118
           KAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K
Sbjct: 129 KAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/109 (72%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
Query: 11  ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAG 69
           AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKALVFY G
Sbjct: 66  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIG 125
Query: 70  KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 118
           KAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K
Sbjct: 126 KAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/116 (70%), Positives = 96/116 (82%), Gaps = 3/116 (2%)
Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKAL 64
           ++ + AL+G +EWYFFTPRDRKYPNGSRPNRAAG+GYWKATGADKP+  + + +GIKKAL
Sbjct: 59  DLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKAL 118
Query: 65  VFYAGKAPKGEKTNWIMHEYRL--ADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 118
           VFYAGKAP+G KT+WIMHEYRL  A    +  KK SLRLDDWVLCR+YNKK   EK
Sbjct: 119 VFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	6e-68
1ut7_A	171	No apical meristem protein; transcription regulati	8e-67
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  206 bits (527), Expect = 6e-68
 Identities = 85/116 (73%), Positives = 99/116 (85%), Gaps = 3/116 (2%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKAL 64
           ++ + AL+G +EWYFFTPRDRKYPNGSRPNRAAG+GYWKATGADKP+  + + +GIKKAL
Sbjct: 59  DLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKAL 118

Query: 65  VFYAGKAPKGEKTNWIMHEYRLADVDRSAR--KKNSLRLDDWVLCRIYNKKGSIEK 118
           VFYAGKAP+G KT+WIMHEYRLAD  R+A   KK SLRLDDWVLCR+YNKK   EK
Sbjct: 119 VFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  204 bits (520), Expect = 8e-67
 Identities = 79/114 (69%), Positives = 91/114 (79%), Gaps = 4/114 (3%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKAL 64
            + + AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKAL
Sbjct: 61  VLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKAL 120

Query: 65  VFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 118
           VFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K
Sbjct: 121 VFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 26/200 (13%), Positives = 52/200 (26%), Gaps = 67/200 (33%)

Query: 76  KTNWIMHEYRLADVDRSARKKNSLR-LDD----WVL------CRIYNKKGSIEKQQQVTN 124
           + + I  +  L  + +S   +N L  L +             C+I            +T 
Sbjct: 226 RIHSI--QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-----------LTT 272

Query: 125 RRPNFTETETETEEKKPVV--MPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTS-D 181
           R    T+  +        +      +        LL                 Y D    
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL----------------KYLDCRPQ 316

Query: 182 SVPKLNTDSSCSEHVVSPEFTC-----EVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQ 236
            +P+       +    +P          ++       W+N      + L + ++ S    
Sbjct: 317 DLPR----EVLT---TNP-RRLSIIAESIRDGLAT--WDNWKHVNCDKLTTIIESSL--- 363

Query: 237 LQGNNQLSP--LQDMFMYFT 254
               N L P   + MF   +
Sbjct: 364 ----NVLEPAEYRKMFDRLS 379

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=2.1e-39  Score=278.98  Aligned_cols=116  Identities=72%  Similarity=1.296  Sum_probs=93.4

Q ss_pred             CCcccccccccCCCceEEEeccCCCCCCCCCCCcccccCccccccCCccccc-CCcceEEEEEEeeeeccCCCCcccCeE
Q 025156            2 IFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWI   80 (257)
Q Consensus         2 ~~P~dLPg~al~gekeWYFFSpr~rKy~nG~R~nRatg~GyWK~tG~~k~I~-~gk~VG~KKtLvFY~Gk~p~g~KT~Wv   80 (257)
                      .+|||||+.+..|+++|||||+|++||++|.|+||+|++||||++|++++|. .+++||+||+|+||.|+++++.||+|+
T Consensus        55 ~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~Wv  134 (174)
T 3ulx_A           55 FDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWI  134 (174)
T ss_dssp             SCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEE
T ss_pred             CCchhhhhhhccCCceEEEEeccccccCCCCCceeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeE
Confidence            3799999999999999999999999999999999999999999999999996 468999999999999999999999999


Q ss_pred             EeEEEecCcchhh--hhcCCCCCCCeEEEEEEeeCCCCc
Q 025156           81 MHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIE  117 (257)
Q Consensus        81 MhEYrL~~~~~s~--~k~~~~~~~dwVLCRIy~Kk~~~e  117 (257)
                      ||||+|.+.....  .+.+....++|||||||+|++.-+
T Consensus       135 MhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~~~~  173 (174)
T 3ulx_A          135 MHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWE  173 (174)
T ss_dssp             EEEEEECSCC-----------CCSSEEEEEEEESCC---
T ss_pred             EEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCCCcC
Confidence            9999999865432  122335678999999999987644

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2e-38  Score=271.96  Aligned_cols=113  Identities=69%  Similarity=1.224  Sum_probs=89.0

Q ss_pred             CCcccccccccCCCceEEEeccCCCCCCCCCCCcccccCccccccCCccccc-CCcceEEEEEEeeeeccCCCCcccCeE
Q 025156            2 IFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWI   80 (257)
Q Consensus         2 ~~P~dLPg~al~gekeWYFFSpr~rKy~nG~R~nRatg~GyWK~tG~~k~I~-~gk~VG~KKtLvFY~Gk~p~g~KT~Wv   80 (257)
                      .+|||||+.+..|+++|||||+|++||++|.|+||+|++||||++|++++|. .+.+||+||+|+||.|+++++.||+|+
T Consensus        57 ~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~Wv  136 (171)
T 1ut7_A           57 FDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWI  136 (171)
T ss_dssp             SCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEE
T ss_pred             CChhHhhchhhcCCccEEEEeccccccCCCCcccccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeE
Confidence            4899999999999999999999999999999999999999999999999996 568999999999999999999999999


Q ss_pred             EeEEEecCcchhhhhcCCCCCCCeEEEEEEeeCCCCc
Q 025156           81 MHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIE  117 (257)
Q Consensus        81 MhEYrL~~~~~s~~k~~~~~~~dwVLCRIy~Kk~~~e  117 (257)
                      ||||+|.....   ..+....++|||||||+|++..+
T Consensus       137 MhEY~l~~~~~---~~~~~~~~~~VlCrv~~k~~~~~  170 (171)
T 1ut7_A          137 MHEYRLIEPSR---RNGSTKLDDWVLCRIYKKQSSAQ  170 (171)
T ss_dssp             EEEEEECCCC-----------CCEEEEEEEECC----
T ss_pred             EEEEEcCCCcc---ccCcccCCCEEEEEEEEcCCCCC
Confidence            99999998642   11234578999999999987644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	257
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-43

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  143 bits (361), Expect = 1e-43
 Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 4/109 (3%)

Query: 6   EISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKAL 64
            + + AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKKAL
Sbjct: 61  VLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKAL 120

Query: 65  VFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK 113
           VFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+
Sbjct: 121 VFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.4e-35  Score=244.50  Aligned_cols=109  Identities=71%  Similarity=1.250  Sum_probs=87.9

Q ss_pred             CCcccccccccCCCceEEEeccCCCCCCCCCCCcccccCccccccCCccccc-CCcceEEEEEEeeeeccCCCCcccCeE
Q 025156            2 IFIREISDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWI   80 (257)
Q Consensus         2 ~~P~dLPg~al~gekeWYFFSpr~rKy~nG~R~nRatg~GyWK~tG~~k~I~-~gk~VG~KKtLvFY~Gk~p~g~KT~Wv   80 (257)
                      .+||+||+.+..++++||||+++.+++++|.|.+|+|++|+||++|+++.|. ++.+||+||+|+||+++.+++.+|+|+
T Consensus        57 ~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~  136 (166)
T d1ut7a_          57 FDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWI  136 (166)
T ss_dssp             SCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEE
T ss_pred             CChhhccchhccCcceEEEEeeeccccCCCCccccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeE
Confidence            4899999998889999999999999999999999999999999999999995 568999999999999999999999999


Q ss_pred             EeEEEecCcchhhhhcCCCCCCCeEEEEEEeeC
Q 025156           81 MHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK  113 (257)
Q Consensus        81 MhEYrL~~~~~s~~k~~~~~~~dwVLCRIy~Kk  113 (257)
                      ||||+|.+....   .+....++|||||||+|+
T Consensus       137 M~EY~l~~~~~~---~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         137 MHEYRLIEPSRR---NGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEEEEECCCC-----------CCEEEEEEEECC
T ss_pred             EEEEecCCcccc---cCccccCCEEEEEEEecC
Confidence            999999876432   123457899999999885