Citrus Sinensis ID: 025193

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
Protein Sequence
MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccccccccccEEEEcccccccccccccEEEEEccccccccccccEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHccEEcEEEEEccccccccEEEEEcccccEEEEEEEEEcccccEEEEEEEcccccEEEccccccccEEEccccccccEEEEEEEccccEEEEccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccccccccccccccccHHHHHHHHHccccccccEEEEEEccccccccccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccccccEEEEEcccccEEEEEEEEccccccEEEEEEEcccccccccccccccccccccEEcccEEEEEEEEccccEEEEccccccccccccEcccccc
Coil and Loop (DISEMBL)
matkanamknfpFLVLFFFISIFVHAINGDYGGWQIAHAtfyggsdasgtmggacgygnlysqgygtnTAALSTALFnnglscgacyeircandpqwclpgtitvtatnfcppnyalsndnggwcnpplqhfdlaqpsFLHIAQYRAGIVPvlfrrvpcvkkggirftingHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNwgqnwqsnsyldgqslsfkvttsdgrtitsynvvpanwkfgqtfegsql
Flexible Loop (DISEMBL)
matkanamknfPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSynvvpanwkfgqtfegsql
Low Complexity Region (SEG)
MATKANAMKNfpflvlfffisifvHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL
Disordered region (IsUnstruct)
********KNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQT******
Disordered Region (DISOPRED)
************FLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL
Disordered Region (DISEMBL)
MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL
Disordered Region (DISPRO)
*ATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFE****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	256	2.2.26 [Sep-21-2011]
O22874	253	Expansin-A8 OS=Arabidopsi	yes	no	0.960	0.972	0.769	1e-111
Q40636	251	Expansin-A2 OS=Oryza sati	yes	no	0.980	1.0	0.738	1e-111
Q9C554	250	Expansin-A1 OS=Arabidopsi	no	no	0.949	0.972	0.785	1e-109
Q0DHB7	246	Expansin-A4 OS=Oryza sati	no	no	0.941	0.979	0.759	1e-108
A2Y5R6	246	Expansin-A4 OS=Oryza sati	N/A	no	0.941	0.979	0.759	1e-108
Q38866	255	Expansin-A2 OS=Arabidopsi	no	no	0.925	0.929	0.744	1e-106
O80622	253	Expansin-A15 OS=Arabidops	no	no	0.945	0.956	0.735	1e-105
Q9LDR9	249	Expansin-A10 OS=Arabidops	no	no	0.968	0.995	0.755	1e-103
Q9FMA0	255	Expansin-A14 OS=Arabidops	no	no	0.953	0.956	0.713	1e-102
O48818	257	Expansin-A4 OS=Arabidopsi	no	no	0.976	0.972	0.708	1e-102

>sp|O22874|EXPA8_ARATH Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1

 Score =  402 bits (1032), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/247 (76%), Positives = 214/247 (86%), Gaps = 1/247 (0%)

Query: 11  FPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTA 70
             + ++     +F+   +GD GGWQ  HATFYGG DASGTMGGACGYGNLY QGYGTNTA
Sbjct: 7   LKYSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTA 66

Query: 71  ALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQ 130
           ALSTALFNNGL+CGACYE++C +DP+WCL  TITVTATNFCPPN  LSNDNGGWCNPPLQ
Sbjct: 67  ALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQ 126

Query: 131 HFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVK 190
           HFDLA+P+FL IAQYRAGIVPV FRRVPC+KKGGIRFTINGHSYFNLVLI+NVGGAGDV 
Sbjct: 127 HFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVH 186

Query: 191 AVFIKGSKT-GWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQ 249
           AV IKGSKT  WQAMSRNWGQNWQSNSY++ QSLSF+VTTSDGRT+ S +V P+NW+FGQ
Sbjct: 187 AVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQ 246

Query: 250 TFEGSQL 256
           T++G Q 
Sbjct: 247 TYQGGQF 253

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.
Arabidopsis thaliana (taxid: 3702)

>sp|Q40636|EXPA2_ORYSJ Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2

 Score =  400 bits (1027), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/256 (73%), Positives = 212/256 (82%), Gaps = 5/256 (1%)

Query: 1   MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNL 60
           MA++++A+     L+LF            DYG WQ AHATFYGG DASGTMGGACGYGNL
Sbjct: 1   MASRSSAL-----LLLFSAFCFLARRAAADYGSWQSAHATFYGGGDASGTMGGACGYGNL 55

Query: 61  YSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSND 120
           YS GYGTNTAALST LFN+G +CG+CYE+RC ND QWCLPG++TVTATN CPPNYAL ND
Sbjct: 56  YSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPND 115

Query: 121 NGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLI 180
           +GGWCNPP  HFD+A+P+FL I  YRAGIVPV +RRVPCVKKGGIRFTINGHSYFNLVL+
Sbjct: 116 DGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLV 175

Query: 181 TNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNV 240
           TNV G GDV++V IKGS TGWQ MSRNWGQNWQSNSYLDGQSLSF+V  SDGRT+TS NV
Sbjct: 176 TNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNV 235

Query: 241 VPANWKFGQTFEGSQL 256
           VPA W+FGQTFEG Q 
Sbjct: 236 VPAGWQFGQTFEGGQF 251

May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C554|EXPA1_ARATH Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/247 (78%), Positives = 210/247 (85%), Gaps = 4/247 (1%)

Query: 14  LVLFFFISIF---VHAING-DYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNT 69
           LV F FI+        +NG   GGW  AHATFYGG DASGTMGGACGYGNLYSQGYGTNT
Sbjct: 3   LVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 62

Query: 70  AALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPL 129
           AALSTALFNNGLSCGAC+EIRC ND +WCLPG+I VTATNFCPPN AL N+ GGWCNPP 
Sbjct: 63  AALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQ 122

Query: 130 QHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDV 189
           QHFDL+QP F  IAQYRAGIVPV +RRVPCV++GGIRFTINGHSYFNLVLITNVGGAGDV
Sbjct: 123 QHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDV 182

Query: 190 KAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQ 249
            +  +KGS+TGWQAMSRNWGQNWQSNSYL+GQSLSFKVTTSDG+TI S NV  A W FGQ
Sbjct: 183 HSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQ 242

Query: 250 TFEGSQL 256
           TF G+QL
Sbjct: 243 TFTGAQL 249

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0DHB7|EXPA4_ORYSJ Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1

 Score =  392 bits (1008), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/241 (75%), Positives = 207/241 (85%)

Query: 16  LFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTA 75
           + F + +   A    YGGWQ AHATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTA
Sbjct: 6   VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 65

Query: 76  LFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLA 135
           LFN+G +CG+CYE+RC N    CLPG+ITVTATNFCPPNY L +D+GGWCNPP  HFD+A
Sbjct: 66  LFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMA 125

Query: 136 QPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIK 195
           +P+FLHIAQYRAGIVPV FRRVPCVKKGG+RFT+NGHSYFNLVL+TNV GAGDV++V IK
Sbjct: 126 EPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIK 185

Query: 196 GSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
           GS+TGWQ MSRNWGQNWQSN++LDGQSLSF+VT SDGRT+TS NV    W+FGQTFEG Q
Sbjct: 186 GSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245

Query: 256 L 256
            
Sbjct: 246 F 246

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Required for normal plant growth. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2Y5R6|EXPA4_ORYSI Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1

 Score =  392 bits (1008), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/241 (75%), Positives = 207/241 (85%)

Query: 16  LFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTA 75
           + F + +   A    YGGWQ AHATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTA
Sbjct: 6   VLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 65

Query: 76  LFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLA 135
           LFN+G +CG+CYE+RC N    CLPG+ITVTATNFCPPNY L +D+GGWCNPP  HFD+A
Sbjct: 66  LFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMA 125

Query: 136 QPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIK 195
           +P+FLHIAQYRAGIVPV FRRVPCVKKGG+RFT+NGHSYFNLVL+TNV GAGDV++V IK
Sbjct: 126 EPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIK 185

Query: 196 GSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
           GS+TGWQ MSRNWGQNWQSN++LDGQSLSF+VT SDGRT+TS NV    W+FGQTFEG Q
Sbjct: 186 GSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQ 245

Query: 256 L 256
            
Sbjct: 246 F 246

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Required for normal plant growth. May be required for rapid internodal elongation in deepwater rice during submergence.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q38866|EXPA2_ARATH Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 178/239 (74%), Positives = 212/239 (88%), Gaps = 2/239 (0%)

Query: 20  ISIFVHAINGD-YGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFN 78
           ++  +++IN D  GGW+  HATFYGG+DASGTMGGACGYGNL+SQGYG  TAALSTALFN
Sbjct: 17  LNFCLYSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFN 76

Query: 79  NGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPS 138
           +G  CGAC+E++C +DP+WC+PG+I V+ATNFCPPN+AL+NDNGGWCNPPL+HFDLA+P+
Sbjct: 77  SGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPA 136

Query: 139 FLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSK 198
           FL IAQYRAGIVPV FRRVPC K GGIRFTING+ YF+LVLITNVGGAGD++AV +KGSK
Sbjct: 137 FLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSK 196

Query: 199 TG-WQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL 256
           T  WQ+MSRNWGQNWQSN+YL GQSLSF+VT SDGRT+ SY+VVP +W+FGQTFEG Q 
Sbjct: 197 TDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|O80622|EXP15_ARATH Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 178/242 (73%), Positives = 204/242 (84%)

Query: 15  VLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST 74
           +  F  +  V +++G   GW  AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST
Sbjct: 11  IALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST 70

Query: 75  ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDL 134
           ALFNNGLSCGAC+EI+C +D  WCLPG I VTATNFCPPN AL N+ GGWCNPPL HFDL
Sbjct: 71  ALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDL 130

Query: 135 AQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFI 194
           +QP F  IAQY+AG+VPV +RRVPC+++GGIRFTINGHSYFNLVL+TNVGGAGDV +V +
Sbjct: 131 SQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAV 190

Query: 195 KGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGS 254
           KGS+T WQ MSRNWGQNWQSN+ L+GQ+LSFKVT SDGRT+ S N+ PA+W FGQTF G 
Sbjct: 191 KGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGR 250

Query: 255 QL 256
           Q 
Sbjct: 251 QF 252

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDR9|EXP10_ARATH Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/249 (75%), Positives = 213/249 (85%), Gaps = 1/249 (0%)

Query: 8   MKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGT 67
           M +  FLV+   + +   +++G  GGW  AHATFYGG DASGTMGGACGYGNLYSQGYGT
Sbjct: 1   MGHLGFLVMIM-VGVMASSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGT 59

Query: 68  NTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNP 127
           +TAALSTALFNNGLSCG+C+EIRC ND +WCLPG+I VTATNFCPPN AL+N+NGGWCNP
Sbjct: 60  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 119

Query: 128 PLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAG 187
           PL+HFDLAQP F  IAQYRAGIVPV +RRVPC ++GGIRFTINGHSYFNLVLITNVGGAG
Sbjct: 120 PLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAG 179

Query: 188 DVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKF 247
           DV +  IKGS+T WQAMSRNWGQNWQSNSYL+GQ+LSFKVTTSDGRT+ S+N  PA W +
Sbjct: 180 DVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSY 239

Query: 248 GQTFEGSQL 256
           GQTF G Q 
Sbjct: 240 GQTFAGGQF 248

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Plays a major role in control of leaf growth and influences the mechanical breakage behavior of the pedicel.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMA0|EXP14_ARATH Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1

 Score =  370 bits (951), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/244 (71%), Positives = 200/244 (81%)

Query: 13  FLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAAL 72
            + L   + I   +++G   GW  A ATFYGG+DASGTMGGACGYGNLYSQGYGTNTAAL
Sbjct: 8   IISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAAL 67

Query: 73  STALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHF 132
           STALFN G SCGAC++I+C +DP+WC+ GTITVT TNFCPPN+A +N+ GGWCNPP  HF
Sbjct: 68  STALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHF 127

Query: 133 DLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAV 192
           DLAQP FL IAQY+AG+VPV +RRV C +KGGIRFTINGHSYFNLVLITNV GAGDV +V
Sbjct: 128 DLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISV 187

Query: 193 FIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFE 252
            IKG+ T WQ+MSRNWGQNWQSN+ LDGQ+LSFKVTTSDGRT+ S N  P NW FGQT+ 
Sbjct: 188 SIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYT 247

Query: 253 GSQL 256
           G Q 
Sbjct: 248 GKQF 251

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

>sp|O48818|EXPA4_ARATH Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/254 (70%), Positives = 204/254 (80%), Gaps = 4/254 (1%)

Query: 7   AMKNFPFLVLFFFISIFVHAINGDY--GGWQIAHATFYGGSDASGTMGGACGYGNLYSQG 64
           A+K       F   S+    I G Y  G WQ AHATFYGGSDASGTMGGACGYGNLYSQG
Sbjct: 2   AIKLAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQG 61

Query: 65  YGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGT--ITVTATNFCPPNYALSNDNG 122
           YGTNTAALSTALFNNG+SCGAC+E++CANDPQWC  G+  I +TATNFCPPN A  +DNG
Sbjct: 62  YGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNG 121

Query: 123 GWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITN 182
           GWCNPP +HFDLA P FL IAQYRAGIVPV +RRVPC K+GGIRFTINGH YFNLVLITN
Sbjct: 122 GWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITN 181

Query: 183 VGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVP 242
           V GAGD+    +KGS+TGW ++SRNWGQNWQSN+ L GQ+LSF+VT SD RT TS+N+VP
Sbjct: 182 VAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVP 241

Query: 243 ANWKFGQTFEGSQL 256
           +NW+FGQTF G   
Sbjct: 242 SNWQFGQTFVGKNF 255

Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
224140591	254	hypothetical protein POPTRDRAFT_577163 [	0.992	1.0	0.832	1e-123
351630231	252	expansin [Breonia chinensis] gi|35163026	0.976	0.992	0.812	1e-118
351630229	255	expansin [Breonia chinensis]	0.996	1.0	0.781	1e-117
255559687	252	Alpha-expansin 8 precursor, putative [Ri	0.890	0.904	0.877	1e-117
217384812	259	expansin 2 [Ziziphus jujuba]	0.945	0.934	0.830	1e-117
351630259	255	expansin [Breonia chinensis]	0.996	1.0	0.777	1e-117
167860796	253	expansin 3 [Dimocarpus longan]	0.949	0.960	0.810	1e-117
356553168	254	PREDICTED: expansin-A8-like [Glycine max	0.949	0.956	0.810	1e-117
345104091	258	alpha-expansin 1 [Gossypium thurberi]	1.0	0.992	0.782	1e-116
345104095	258	alpha-expansin 1 [Gossypium schwendimani	1.0	0.992	0.782	1e-116

>gi|224140591|ref|XP_002323665.1| hypothetical protein POPTRDRAFT_577163 [Populus trichocarpa] gi|222868295|gb|EEF05426.1| hypothetical protein POPTRDRAFT_577163 [Populus trichocarpa]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/256 (83%), Positives = 232/256 (90%), Gaps = 2/256 (0%)

Query: 1   MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNL 60
           MA KA  M++F F+ L+  +S  +H I GDYGGWQ+ HATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAIKA--MQDFVFVQLYLVLSFLLHGIYGDYGGWQVGHATFYGGSDASGTMGGACGYGNL 58

Query: 61  YSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSND 120
           YSQGYGT+TAALSTALFNNGLSCGAC++IRC NDP+WC  GTITVTATNFCPPNYALSND
Sbjct: 59  YSQGYGTSTAALSTALFNNGLSCGACFQIRCNNDPKWCHSGTITVTATNFCPPNYALSND 118

Query: 121 NGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLI 180
           NGGWCNPPL+HFDLAQP+FL IAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLI
Sbjct: 119 NGGWCNPPLKHFDLAQPAFLQIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLI 178

Query: 181 TNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNV 240
           TNV GAGDV AV IKGS+TGWQ MSRNWGQNWQSNSYL+GQ LSF+VTTSDG+T+T YNV
Sbjct: 179 TNVAGAGDVHAVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQRLSFRVTTSDGKTVTWYNV 238

Query: 241 VPANWKFGQTFEGSQL 256
           VPANW+FGQTF G QL
Sbjct: 239 VPANWQFGQTFAGGQL 254

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351630231|gb|AEQ55270.1| expansin [Breonia chinensis] gi|351630261|gb|AEQ55285.1| expansin [Breonia chinensis]

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/251 (81%), Positives = 225/251 (89%), Gaps = 1/251 (0%)

Query: 7   AMKNFPFL-VLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGY 65
           A+  F +L +LFFF +I +    GDYGGWQ AHATFYGG DASGTMGGACGYGNLYSQGY
Sbjct: 2   AIPAFSYLSLLFFFFTICLRTTFGDYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGY 61

Query: 66  GTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWC 125
           GTNTAALSTALFNNGLSCG+CYEIRC +DP+WCLPGTITVTATNFCPPN AL NDNGGWC
Sbjct: 62  GTNTAALSTALFNNGLSCGSCYEIRCDSDPKWCLPGTITVTATNFCPPNPALPNDNGGWC 121

Query: 126 NPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGG 185
           NPP QHFDLA+P+FL IAQYRAGIVPV F+RVPC KKGG+RFTINGHSYFNLVL+TNV G
Sbjct: 122 NPPRQHFDLAEPAFLQIAQYRAGIVPVAFQRVPCRKKGGVRFTINGHSYFNLVLVTNVAG 181

Query: 186 AGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANW 245
           AGDV +V IKGS+TGWQ MSRNWGQNWQSNSYL+GQSLSF++T+SDGRT+TSYNV PANW
Sbjct: 182 AGDVHSVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFQITSSDGRTLTSYNVAPANW 241

Query: 246 KFGQTFEGSQL 256
           +FGQTFEG Q 
Sbjct: 242 QFGQTFEGGQF 252

Source: Breonia chinensis

Species: Breonia chinensis

Genus: Breonia

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351630229|gb|AEQ55269.1| expansin [Breonia chinensis]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/256 (78%), Positives = 223/256 (87%), Gaps = 1/256 (0%)

Query: 1   MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNL 60
           MATK ++      +++ FF+ + +H    DYGGWQ AHATFYGG DASGTMGGACGYGNL
Sbjct: 1   MATKTSSFATLSLMIIAFFM-LQLHFTKADYGGWQSAHATFYGGGDASGTMGGACGYGNL 59

Query: 61  YSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSND 120
           YSQGYGTNTAALSTA+FNNGL+CG+CYE+RC  DP+WCL GTITVTATNFCPPN+AL ND
Sbjct: 60  YSQGYGTNTAALSTAMFNNGLACGSCYEMRCDGDPKWCLSGTITVTATNFCPPNFALPND 119

Query: 121 NGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLI 180
           NGGWCNPP QHFDLA+P+FL IAQYRAGIVPV FRRV CVKKG IRFTINGHSYFNLVL+
Sbjct: 120 NGGWCNPPRQHFDLAEPAFLQIAQYRAGIVPVAFRRVTCVKKGSIRFTINGHSYFNLVLV 179

Query: 181 TNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNV 240
           TNV GAGD+ AV IKGS+TGWQ+MSRNWGQNWQSNSYL+GQSLSF VT SDGRT+TSYNV
Sbjct: 180 TNVAGAGDIHAVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQSLSFMVTASDGRTVTSYNV 239

Query: 241 VPANWKFGQTFEGSQL 256
            PANW+FGQTFEG Q 
Sbjct: 240 APANWQFGQTFEGGQF 255

Source: Breonia chinensis

Species: Breonia chinensis

Genus: Breonia

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559687|ref|XP_002520863.1| Alpha-expansin 8 precursor, putative [Ricinus communis] gi|223539994|gb|EEF41572.1| Alpha-expansin 8 precursor, putative [Ricinus communis]

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/228 (87%), Positives = 214/228 (93%)

Query: 29  GDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYE 88
           GDYGGWQ AHATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTALFN+GLSCG+CYE
Sbjct: 25  GDYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYE 84

Query: 89  IRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAG 148
           +RC NDP+WCLPGTITVTATNFCPPN+A SNDNGGWCNPPLQHFDLA+P+FL IAQYRAG
Sbjct: 85  MRCDNDPKWCLPGTITVTATNFCPPNFAQSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAG 144

Query: 149 IVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNW 208
           IVPV FRR+PC KKGGIRFTINGHSYFNLVLITNV GAGDV +V IKGSKTGWQ MSRNW
Sbjct: 145 IVPVSFRRIPCAKKGGIRFTINGHSYFNLVLITNVAGAGDVHSVSIKGSKTGWQTMSRNW 204

Query: 209 GQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL 256
           GQNWQSNSY++GQSLSF+VTTSDGRT+TSYNV PANW+FGQTFEG Q 
Sbjct: 205 GQNWQSNSYMNGQSLSFQVTTSDGRTVTSYNVAPANWQFGQTFEGGQF 252

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217384812|gb|ACK43222.1| expansin 2 [Ziziphus jujuba]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/242 (83%), Positives = 222/242 (91%)

Query: 15  VLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALST 74
           +LF  +++ +    GD GGWQ  HATFYGG DASGTMGGACGYGNLYSQGYGTNTAALST
Sbjct: 18  LLFCVLNLCLRGTFGDNGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALST 77

Query: 75  ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDL 134
           ALFNNGLSCG+CYE+RC +DP+WCLPG+I VTATNFCPPN+ALSNDNGGWCNPPLQHFDL
Sbjct: 78  ALFNNGLSCGSCYEMRCDSDPKWCLPGSILVTATNFCPPNFALSNDNGGWCNPPLQHFDL 137

Query: 135 AQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFI 194
           A+P+FL IAQY+AGIVP+ FRRVPCVKKGG+RFTINGHSYFNLVLITNVGGAGDV +V I
Sbjct: 138 AEPAFLQIAQYKAGIVPISFRRVPCVKKGGVRFTINGHSYFNLVLITNVGGAGDVHSVSI 197

Query: 195 KGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGS 254
           KGSKTGWQ MSRNWGQNWQSNSYL+GQSLSF+VTTSDGRT+TSYNVVPANW+FGQTF GS
Sbjct: 198 KGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTLTSYNVVPANWQFGQTFAGS 257

Query: 255 QL 256
           Q 
Sbjct: 258 QF 259

Source: Ziziphus jujuba

Species: Ziziphus jujuba

Genus: Ziziphus

Family: Rhamnaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351630259|gb|AEQ55284.1| expansin [Breonia chinensis]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 199/256 (77%), Positives = 222/256 (86%), Gaps = 1/256 (0%)

Query: 1   MATKANAMKNFPFLVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNL 60
           M TK ++      +++ FF+ + +H    DYGGWQ AHATFYGG DASGTMGGACGYGNL
Sbjct: 1   MTTKTSSFATLSLMIIAFFM-LQLHFTKADYGGWQSAHATFYGGGDASGTMGGACGYGNL 59

Query: 61  YSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSND 120
           YSQGYGTNTAALSTA+FNNGL+CG+CYE+RC  DP+WCL GTITVTATNFCPPN+AL ND
Sbjct: 60  YSQGYGTNTAALSTAMFNNGLACGSCYEMRCDGDPKWCLSGTITVTATNFCPPNFALPND 119

Query: 121 NGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLI 180
           NGGWCNPP QHFDLA+P+FL IAQYRAGIVPV FRRV CVKKG IRFTINGHSYFNLVL+
Sbjct: 120 NGGWCNPPRQHFDLAEPAFLQIAQYRAGIVPVAFRRVTCVKKGSIRFTINGHSYFNLVLV 179

Query: 181 TNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNV 240
           TNV GAGD+ AV IKGS+TGWQ+MSRNWGQNWQSNSYL+GQSLSF VT SDGRT+TSYNV
Sbjct: 180 TNVAGAGDIHAVSIKGSRTGWQSMSRNWGQNWQSNSYLNGQSLSFMVTASDGRTVTSYNV 239

Query: 241 VPANWKFGQTFEGSQL 256
            PANW+FGQTFEG Q 
Sbjct: 240 APANWQFGQTFEGGQF 255

Source: Breonia chinensis

Species: Breonia chinensis

Genus: Breonia

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|167860796|gb|ACA05166.1| expansin 3 [Dimocarpus longan]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/243 (81%), Positives = 220/243 (90%)

Query: 14  LVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALS 73
           L+ F  IS+ + A+ GD GGWQ  HATFYGG DASGTMGGACGYGNLY QGYGTNTAALS
Sbjct: 11  LLFFMLISLCLQAVYGDDGGWQSGHATFYGGGDASGTMGGACGYGNLYGQGYGTNTAALS 70

Query: 74  TALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFD 133
           TALFNNGLSCG+CYE++C  DP+WCLPG++ VTATNFCPPN AL+NDNGGWCNPPLQHFD
Sbjct: 71  TALFNNGLSCGSCYEMKCDKDPKWCLPGSVIVTATNFCPPNNALANDNGGWCNPPLQHFD 130

Query: 134 LAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVF 193
           +A+P+FL IAQYRAGIVP+ FRRVPCVKKGGIRFT+NGHSYFNLVLITNV GAGDV +V 
Sbjct: 131 MAEPAFLQIAQYRAGIVPISFRRVPCVKKGGIRFTVNGHSYFNLVLITNVAGAGDVHSVS 190

Query: 194 IKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
           IKGSKTGWQ MSRNWGQNWQSNSYL+GQSLSF+VTTSDG+T+TSYNVVPANW+FGQTF G
Sbjct: 191 IKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGKTVTSYNVVPANWQFGQTFSG 250

Query: 254 SQL 256
           +Q 
Sbjct: 251 AQF 253

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553168|ref|XP_003544930.1| PREDICTED: expansin-A8-like [Glycine max]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/243 (81%), Positives = 218/243 (89%)

Query: 14  LVLFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALS 73
           LV+F F+ +  H    DYGGWQ  HATFYGG DASGTMGGACGYGNLYSQGYGTNTAALS
Sbjct: 12  LVIFLFVEMHFHGATADYGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALS 71

Query: 74  TALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFD 133
           TALFNNGLSCGACYE+RC +DP+WC PGTI VTATNFCPPN+AL+N+NGGWCNPPLQHFD
Sbjct: 72  TALFNNGLSCGACYEMRCDDDPRWCKPGTIVVTATNFCPPNFALANNNGGWCNPPLQHFD 131

Query: 134 LAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVF 193
           +A+P+FL IAQYRAGIVPV FRRVPCVKKGGIRFTINGHSYFNLVLITNV GAGDV AV 
Sbjct: 132 MAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVS 191

Query: 194 IKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
           IKGS+T WQ MSRNWGQNWQSNSYL+GQSLSF+VT SDGRT+TS+NV P++W+FGQTF+G
Sbjct: 192 IKGSRTSWQPMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSFNVAPSDWQFGQTFQG 251

Query: 254 SQL 256
            Q 
Sbjct: 252 GQF 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|345104091|gb|AEN70867.1| alpha-expansin 1 [Gossypium thurberi]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/258 (78%), Positives = 226/258 (87%), Gaps = 2/258 (0%)

Query: 1   MATKANAMKNFPFLVLFFFI--SIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYG 58
           MATK   ++ FP     F +  SIF+ A   D GGWQ AHATFYGG+DA+GTMGGACGYG
Sbjct: 1   MATKTMMLQIFPLFFFLFSVCTSIFLGANGDDNGGWQTAHATFYGGADATGTMGGACGYG 60

Query: 59  NLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALS 118
           NLYSQGYGT+TAALSTALFNNGLSCGACYE+RC NDPQWC+  TITVTATNFCPPNYALS
Sbjct: 61  NLYSQGYGTSTAALSTALFNNGLSCGACYELRCNNDPQWCISRTITVTATNFCPPNYALS 120

Query: 119 NDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLV 178
           +DNGGWCNPP +HFDLA+P+FL IA+YRAGIVPV+FRRV CVKKGGIR+T+NGHSYFN+V
Sbjct: 121 SDNGGWCNPPREHFDLAEPAFLQIAEYRAGIVPVMFRRVSCVKKGGIRYTMNGHSYFNMV 180

Query: 179 LITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSY 238
           LITNVGGAGD+ +V IKGSKTGW  MSRNWGQNWQSN+YL+GQSLSFKVT SDGRTIT+Y
Sbjct: 181 LITNVGGAGDITSVSIKGSKTGWLPMSRNWGQNWQSNAYLNGQSLSFKVTASDGRTITNY 240

Query: 239 NVVPANWKFGQTFEGSQL 256
           NVVPA W+FGQTFEG Q 
Sbjct: 241 NVVPAGWQFGQTFEGGQF 258

Source: Gossypium thurberi

Species: Gossypium thurberi

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|345104095|gb|AEN70869.1| alpha-expansin 1 [Gossypium schwendimanii]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 202/258 (78%), Positives = 226/258 (87%), Gaps = 2/258 (0%)

Query: 1   MATKANAMKNFPFLVLFFFI--SIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYG 58
           MATK   ++ FP     F +  SIF+ A   D GGWQ AHATFYGG+DA+GTMGGACGYG
Sbjct: 1   MATKTMMLQIFPLFFFLFSVCNSIFLGANGDDNGGWQTAHATFYGGADATGTMGGACGYG 60

Query: 59  NLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALS 118
           NLYSQGYGT+TAALSTALFNNGLSCGACYE+RC NDPQWC+  TITVTATNFCPPNYALS
Sbjct: 61  NLYSQGYGTSTAALSTALFNNGLSCGACYELRCNNDPQWCISQTITVTATNFCPPNYALS 120

Query: 119 NDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLV 178
           +DNGGWCNPP +HFDLA+P+FL IA+YRAGIVPV+FRRV CVKKGGIR+T+NGHSYFN+V
Sbjct: 121 SDNGGWCNPPREHFDLAEPAFLQIAEYRAGIVPVMFRRVSCVKKGGIRYTMNGHSYFNMV 180

Query: 179 LITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSY 238
           LITNVGGAGD+ +V IKGSKTGW  MSRNWGQNWQSN+YL+GQSLSFKVT SDGRTIT+Y
Sbjct: 181 LITNVGGAGDITSVSIKGSKTGWLPMSRNWGQNWQSNAYLNGQSLSFKVTASDGRTITNY 240

Query: 239 NVVPANWKFGQTFEGSQL 256
           NVVPA W+FGQTFEG Q 
Sbjct: 241 NVVPAGWQFGQTFEGGQF 258

Source: Gossypium schwendimanii

Species: Gossypium schwendimanii

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
TAIR|locus:2061918	253	EXPA8 "expansin A8" [Arabidops	0.890	0.901	0.825	1.7e-107
TAIR|locus:2200625	259	EXPA10 "expansin A10" [Arabido	0.898	0.888	0.8	1.7e-105
TAIR|locus:2007106	275	EXPA1 "expansin A1" [Arabidops	0.875	0.814	0.823	1.6e-104
TAIR|locus:2153569	255	EXPA2 "expansin A2" [Arabidops	0.902	0.905	0.763	9.8e-103
TAIR|locus:2056670	253	EXPA15 "expansin A15" [Arabido	0.898	0.909	0.765	1.4e-101
TAIR|locus:2043240	257	EXPA4 "expansin A4" [Arabidops	0.886	0.883	0.761	8.2e-99
TAIR|locus:2161028	255	EXPA14 "expansin A14" [Arabido	0.898	0.901	0.747	1.3e-98
TAIR|locus:2099991	260	EXPA16 "expansin A16" [Arabido	0.867	0.853	0.745	2.9e-96
TAIR|locus:2053260	257	EXPA6 "expansin A6" [Arabidops	0.875	0.871	0.745	3.7e-96
TAIR|locus:2040686	262	EXP3 [Arabidopsis thaliana (ta	0.886	0.866	0.740	1.6e-95

TAIR|locus:2061918 EXPA8 "expansin A8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
 Identities = 189/229 (82%), Positives = 208/229 (90%)

Query:    28 NGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACY 87
             +GD GGWQ  HATFYGG DASGTMGGACGYGNLY QGYGTNTAALSTALFNNGL+CGACY
Sbjct:    24 HGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACY 83

Query:    88 EIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRA 147
             E++C +DP+WCL  TITVTATNFCPPN  LSNDNGGWCNPPLQHFDLA+P+FL IAQYRA
Sbjct:    84 EMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRA 143

Query:   148 GIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKT-GWQAMSR 206
             GIVPV FRRVPC+KKGGIRFTINGHSYFNLVLI+NVGGAGDV AV IKGSKT  WQAMSR
Sbjct:   144 GIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSR 203

Query:   207 NWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
             NWGQNWQSNSY++ QSLSF+VTTSDGRT+ S +V P+NW+FGQT++G Q
Sbjct:   204 NWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQGGQ 252

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2200625 EXPA10 "expansin A10" [Arabidopsis thaliana (taxid:3702)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 184/230 (80%), Positives = 205/230 (89%)

Query:    26 AINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGA 85
             +++G  GGW  AHATFYGG DASGTMGGACGYGNLYSQGYGT+TAALSTALFNNGLSCG+
Sbjct:    28 SVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGS 87

Query:    86 CYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY 145
             C+EIRC ND +WCLPG+I VTATNFCPPN AL+N+NGGWCNPPL+HFDLAQP F  IAQY
Sbjct:    88 CFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQY 147

Query:   146 RAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMS 205
             RAGIVPV +RRVPC ++GGIRFTINGHSYFNLVLITNVGGAGDV +  IKGS+T WQAMS
Sbjct:   148 RAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMS 207

Query:   206 RNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
             RNWGQNWQSNSYL+GQ+LSFKVTTSDGRT+ S+N  PA W +GQTF G Q
Sbjct:   208 RNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQ 257

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS;IMP

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0005199 "structural constituent of cell wall" evidence=TAS

GO:0009505 "plant-type cell wall" evidence=TAS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2007106 EXPA1 "expansin A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
 Identities = 187/227 (82%), Positives = 201/227 (88%)

Query:    27 INGDY--GGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG 84
             +NG Y  GGW  AHATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG
Sbjct:    19 VNG-YAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG 77

Query:    85 ACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ 144
             AC+EIRC ND +WCLPG+I VTATNFCPPN AL N+ GGWCNPP QHFDL+QP F  IAQ
Sbjct:    78 ACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQ 137

Query:   145 YRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAM 204
             YRAGIVPV +RRVPCV++GGIRFTINGHSYFNLVLITNVGGAGDV +  +KGS+TGWQAM
Sbjct:   138 YRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAM 197

Query:   205 SRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTF 251
             SRNWGQNWQSNSYL+GQSLSFKVTTSDG+TI S NV  A W FGQTF
Sbjct:   198 SRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTF 244

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2153569 EXPA2 "expansin A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
 Identities = 178/233 (76%), Positives = 209/233 (89%)

Query:    25 HAINGD-YGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSC 83
             ++IN D  GGW+  HATFYGG+DASGTMGGACGYGNL+SQGYG  TAALSTALFN+G  C
Sbjct:    22 YSINSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKC 81

Query:    84 GACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIA 143
             GAC+E++C +DP+WC+PG+I V+ATNFCPPN+AL+NDNGGWCNPPL+HFDLA+P+FL IA
Sbjct:    82 GACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIA 141

Query:   144 QYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTG-WQ 202
             QYRAGIVPV FRRVPC K GGIRFTING+ YF+LVLITNVGGAGD++AV +KGSKT  WQ
Sbjct:   142 QYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQ 201

Query:   203 AMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
             +MSRNWGQNWQSN+YL GQSLSF+VT SDGRT+ SY+VVP +W+FGQTFEG Q
Sbjct:   202 SMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQ 254

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=TAS

TAIR|locus:2056670 EXPA15 "expansin A15" [Arabidopsis thaliana (taxid:3702)]

 Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
 Identities = 176/230 (76%), Positives = 200/230 (86%)

Query:    26 AINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGA 85
             +++G   GW  AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGA
Sbjct:    22 SVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGA 81

Query:    86 CYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY 145
             C+EI+C +D  WCLPG I VTATNFCPPN AL N+ GGWCNPPL HFDL+QP F  IAQY
Sbjct:    82 CFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQY 141

Query:   146 RAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMS 205
             +AG+VPV +RRVPC+++GGIRFTINGHSYFNLVL+TNVGGAGDV +V +KGS+T WQ MS
Sbjct:   142 KAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMS 201

Query:   206 RNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
             RNWGQNWQSN+ L+GQ+LSFKVT SDGRT+ S N+ PA+W FGQTF G Q
Sbjct:   202 RNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQ 251

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2043240 EXPA4 "expansin A4" [Arabidopsis thaliana (taxid:3702)]

 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 176/231 (76%), Positives = 198/231 (85%)

Query:    27 INGDYGG--WQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG 84
             I G Y G  WQ AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG+SCG
Sbjct:    22 IPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCG 81

Query:    85 ACYEIRCANDPQWCLPGT--ITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHI 142
             AC+E++CANDPQWC  G+  I +TATNFCPPN A  +DNGGWCNPP +HFDLA P FL I
Sbjct:    82 ACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKI 141

Query:   143 AQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQ 202
             AQYRAGIVPV +RRVPC K+GGIRFTINGH YFNLVLITNV GAGD+    +KGS+TGW 
Sbjct:   142 AQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWM 201

Query:   203 AMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
             ++SRNWGQNWQSN+ L GQ+LSF+VT SD RT TS+N+VP+NW+FGQTF G
Sbjct:   202 SLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVG 252

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2161028 EXPA14 "expansin A14" [Arabidopsis thaliana (taxid:3702)]

 Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
 Identities = 172/230 (74%), Positives = 196/230 (85%)

Query:    26 AINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGA 85
             +++G   GW  A ATFYGG+DASGTMGGACGYGNLYSQGYGTNTAALSTALFN G SCGA
Sbjct:    21 SVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGA 80

Query:    86 CYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY 145
             C++I+C +DP+WC+ GTITVT TNFCPPN+A +N+ GGWCNPP  HFDLAQP FL IAQY
Sbjct:    81 CFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQY 140

Query:   146 RAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMS 205
             +AG+VPV +RRV C +KGGIRFTINGHSYFNLVLITNV GAGDV +V IKG+ T WQ+MS
Sbjct:   141 KAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMS 200

Query:   206 RNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
             RNWGQNWQSN+ LDGQ+LSFKVTTSDGRT+ S N  P NW FGQT+ G Q
Sbjct:   201 RNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQ 250

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

TAIR|locus:2099991 EXPA16 "expansin A16" [Arabidopsis thaliana (taxid:3702)]

 Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
 Identities = 167/224 (74%), Positives = 191/224 (85%)

Query:    32 GGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRC 91
             G WQ AHATFYGG+DASGTMGGACGYGNLYSQGYGTNTAALST+LFN+G SCGAC+EI+C
Sbjct:    32 GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKC 91

Query:    92 ANDPQWCLPG--TITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGI 149
              NDP+WC PG  ++ VTATNFCPPN A  +DNGGWCNPP  HFDLA P FL IA+YRAGI
Sbjct:    92 VNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGI 151

Query:   150 VPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWG 209
             VP+ +RRV C K GGIRFTINGH YFNLVLITNV GAGD+    +KGSKTGW +++RNWG
Sbjct:   152 VPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWG 211

Query:   210 QNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
             QNWQSN+ L GQSLSF+VT+SD RT TS+N+ P+NW+FGQTF G
Sbjct:   212 QNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVG 255

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP

TAIR|locus:2053260 EXPA6 "expansin A6" [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 170/228 (74%), Positives = 193/228 (84%)

Query:    28 NGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACY 87
             NG  GGW+ AHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNG SCGAC+
Sbjct:    27 NG--GGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACF 84

Query:    88 EIRCANDPQWCLPGT--ITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY 145
             E++CA+DP+WC  G+  I +TATNFCPPN+A  +DNGGWCNPP  HFDLA P FL IA+Y
Sbjct:    85 ELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEY 144

Query:   146 RAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMS 205
             RAGIVPV FRRVPC K+GGIRFTING  YFNLVL+TNV GAG++  + +KG+ T W  MS
Sbjct:   145 RAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMS 204

Query:   206 RNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
             RNWGQNWQSNS L GQSLSF+VT+SD R+ TS+N+ PANWKFGQTF G
Sbjct:   205 RNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMG 252

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

TAIR|locus:2040686 EXP3 [Arabidopsis thaliana (taxid:3702)]

 Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
 Identities = 171/231 (74%), Positives = 191/231 (82%)

Query:    27 INGDYGG--WQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG 84
             I G Y G  WQ AHATFYGGSDASGTMGGACGYGNLYSQGYG NTAALSTALFNNG SCG
Sbjct:    27 IPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCG 86

Query:    85 ACYEIRCANDPQWCLPG--TITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHI 142
             AC+EI+C +DP+WC+PG  +I VTATNFCPPN+A  +D+GGWCNPP +HFDLA P FL I
Sbjct:    87 ACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKI 146

Query:   143 AQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQ 202
               YRAGIVPV +RRVPC K GGIRFT+NG  YFNLVL+TNV GAGD+  V +KGSKT W 
Sbjct:   147 GLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWV 206

Query:   203 AMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
              MSRNWGQNWQSN+ L GQSLSF+VT SD R+ TS+NV PA W+FGQTF G
Sbjct:   207 RMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSG 257

GO:0005576 "extracellular region" evidence=ISM;IEA

GO:0009664 "plant-type cell wall organization" evidence=IEA

GO:0009826 "unidimensional cell growth" evidence=ISS;NAS

GO:0009828 "plant-type cell wall loosening" evidence=ISS;NAS

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=ISS

GO:0006949 "syncytium formation" evidence=IEP;RCA

GO:0009739 "response to gibberellin stimulus" evidence=TAS

GO:0010114 "response to red light" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LNU3	EXP11_ARATH	No assigned EC number	0.7064	0.8398	0.8531	no	no
O80622	EXP15_ARATH	No assigned EC number	0.7355	0.9453	0.9565	no	no
Q38864	EXPA5_ARATH	No assigned EC number	0.7053	0.8398	0.8431	no	no
Q38866	EXPA2_ARATH	No assigned EC number	0.7447	0.9257	0.9294	no	no
O48818	EXPA4_ARATH	No assigned EC number	0.7086	0.9765	0.9727	no	no
A2Y5R6	EXPA4_ORYSI	No assigned EC number	0.7593	0.9414	0.9796	N/A	no
O22874	EXPA8_ARATH	No assigned EC number	0.7692	0.9609	0.9723	yes	no
Q9C554	EXPA1_ARATH	No assigned EC number	0.7854	0.9492	0.972	no	no
Q40636	EXPA2_ORYSJ	No assigned EC number	0.7382	0.9804	1.0	yes	no
O80932	EXPA3_ARATH	No assigned EC number	0.7078	0.9335	0.9122	no	no
Q9FMA0	EXP14_ARATH	No assigned EC number	0.7131	0.9531	0.9568	no	no
Q0DHB7	EXPA4_ORYSJ	No assigned EC number	0.7593	0.9414	0.9796	no	no
Q9LDR9	EXP10_ARATH	No assigned EC number	0.7550	0.9687	0.9959	no	no
Q852A1	EXPA7_ORYSJ	No assigned EC number	0.7242	0.9257	0.8977	no	no
Q4PNY1	EXP11_ORYSJ	No assigned EC number	0.7385	0.8476	0.875	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PtEXPA13 hypothetical protein (254 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	256
PLN00050	247	PLN00050, PLN00050, expansin A; Provisional	1e-134
PLN00193	256	PLN00193, PLN00193, expansin-A; Provisional	1e-132
smart00837	87	smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like	2e-55
pfam01357	82	pfam01357, Pollen_allerg_1, Pollen allergen	3e-38
pfam03330	77	pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like	3e-27
PLN03023	247	PLN03023, PLN03023, Expansin-like B1; Provisional	1e-23
PLN03024	125	PLN03024, PLN03024, Putative EG45-like domain cont	9e-05

>gnl|CDD|165628 PLN00050, PLN00050, expansin A; Provisional

 Score =  378 bits (972), Expect = e-134
 Identities = 181/230 (78%), Positives = 198/230 (86%)

Query: 27  INGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGAC 86
           + G   GW  AHATFYGG DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGAC
Sbjct: 18  VEGYGSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGAC 77

Query: 87  YEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYR 146
           +EI+C ND  WCLPG+I +TATNFCPPN AL N++GGWCNPP QHFDL+QP F  IAQY+
Sbjct: 78  FEIKCVNDNIWCLPGSIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYK 137

Query: 147 AGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSR 206
           AGIVPV +RRV C K GGIRFTINGHSYFNLVLITNVGGAGD+ AV IKGSK+ WQAMSR
Sbjct: 138 AGIVPVQYRRVACRKSGGIRFTINGHSYFNLVLITNVGGAGDIVAVSIKGSKSNWQAMSR 197

Query: 207 NWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL 256
           NWGQNWQSNSYL+GQ+LSFKVTTSDGRT+ S N  P+NW FGQT+ G Q 
Sbjct: 198 NWGQNWQSNSYLNGQALSFKVTTSDGRTVISNNAAPSNWAFGQTYTGMQF 247

Length = 247

>gnl|CDD|215097 PLN00193, PLN00193, expansin-A; Provisional

 Score =  374 bits (962), Expect = e-132
 Identities = 172/247 (69%), Positives = 192/247 (77%), Gaps = 4/247 (1%)

Query: 13  FLVLFFFISIFVHAING-DYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAA 71
             +L  F       +N     GW  AHATFYGGSDASGTMGGACGYGNLYS GYGT TAA
Sbjct: 8   LAILLQFCCYLFINVNAFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAA 67

Query: 72  LSTALFNNGLSCGACYEIRC--ANDPQWCLPGT-ITVTATNFCPPNYALSNDNGGWCNPP 128
           LSTALFN+G SCG CY I C    D +WC+ G  +T+TATNFCPPNYAL N+NGGWCNPP
Sbjct: 68  LSTALFNDGASCGQCYRIMCDYQADSRWCIKGASVTITATNFCPPNYALPNNNGGWCNPP 127

Query: 129 LQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFNLVLITNVGGAGD 188
           LQHFD+AQP++  I  YR GIVPVLF+RVPC K GG+RFTING  YF LVLI+NVGGAG 
Sbjct: 128 LQHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFTINGRDYFELVLISNVGGAGS 187

Query: 189 VKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFG 248
           +++V IKGSKTGW AMSRNWG NWQSN+YLDGQSLSFKVTT+DG+T    NVVPANW FG
Sbjct: 188 IQSVSIKGSKTGWMAMSRNWGANWQSNAYLDGQSLSFKVTTTDGQTRFFLNVVPANWGFG 247

Query: 249 QTFEGSQ 255
           QTF  S 
Sbjct: 248 QTFSSSV 254

Length = 256

>gnl|CDD|129070 smart00837, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score =  172 bits (438), Expect = 2e-55
 Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)

Query: 69  TAALSTALFNNGLSCGACYEIRCANDPQWCLPGT-ITVTATNFCPPNYALSNDNGGWCNP 127
           TAALSTALFNNG SCGACYEI C + P+WC PG  ITVTATNFCPPNYALSNDNGGWCNP
Sbjct: 1   TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNP 60

Query: 128 PLQHFDLAQPSFLHIAQYRAGIVPVLF 154
           P +HFDL+QP+F  IAQY+AGIVPV +
Sbjct: 61  PRKHFDLSQPAFEKIAQYKAGIVPVKY 87

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 87

>gnl|CDD|216453 pfam01357, Pollen_allerg_1, Pollen allergen

 Score =  128 bits (324), Expect = 3e-38
 Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 4/82 (4%)

Query: 165 IRFTINGHS--YFNLVLITNVGGAGDVKAVFIKGSKTG-WQAMSRNWGQNWQSNSYLDGQ 221
           +RFT+NG S  YF  VL+ NVGG GD+ AV IK + +G W  MSRNWG NWQS+S L G 
Sbjct: 1   VRFTVNGGSNPYFLAVLVENVGGDGDIVAVEIKEAGSGEWIPMSRNWGANWQSDSVLLGG 60

Query: 222 SLSFKVTTSD-GRTITSYNVVP 242
            LSF+VT+SD G+T+ + NV+P
Sbjct: 61  PLSFRVTSSDSGKTLVADNVIP 82

This family contains allergens lol PI, PII and PIII from Lolium perenne. Length = 82

>gnl|CDD|217497 pfam03330, DPBB_1, Rare lipoprotein A (RlpA)-like double-psi beta-barrel

 Score =   99 bits (250), Expect = 3e-27
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 17/90 (18%)

Query: 69  TAALSTALFNNGLSCGACYEIRC---ANDPQWCLPG-TITVTATNFCPPNYALSNDNGGW 124
           TAA S +L+N+G +CG CY+++C   A+    C    ++TVT T+ CP            
Sbjct: 1   TAAGSASLYNDGTACGECYQVKCLTAAHPTGTCRVLRSVTVTITDRCPF----------- 49

Query: 125 CNPPLQHFDLAQPSFLHIAQYRAGIVPVLF 154
             PP +HFDL+ P+F  +A+ RAGIVPV +
Sbjct: 50  --PPRRHFDLSGPAFEALAKPRAGIVPVEY 77

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen. Length = 77

>gnl|CDD|215542 PLN03023, PLN03023, Expansin-like B1; Provisional

 Score = 95.3 bits (237), Expect = 1e-23
 Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 16/221 (7%)

Query: 39  ATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWC 98
           AT+YG  D  GT  GACG+G       G N A +S  L+ NG  CGACY++RC   P  C
Sbjct: 30  ATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVSR-LYRNGTGCGACYQVRC-KAPNLC 87

Query: 99  LPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVP 158
               + V  T++         D   +   P  +  LA+P+ +    +  G+V V +RR+P
Sbjct: 88  SDDGVNVVVTDYG------EGDKTDFILSPRAYARLARPN-MAAELFAYGVVDVEYRRIP 140

Query: 159 CVKKG-GIRFTINGHSYFN---LVLITNVGGAGDVKAVFI-KGSKTGWQAMSRNWGQNWQ 213
           C   G  + F ++ HS F     +++    G  D+ AV I +     W+ M + +G  W 
Sbjct: 141 CRYAGYNLFFKVHEHSRFPDYLAIVMLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWD 200

Query: 214 SNSYLDGQ-SLSFKVTTSDGRT-ITSYNVVPANWKFGQTFE 252
             +   G  +L F+V+ S G+T + + NV+P++WK G  ++
Sbjct: 201 MPNPPKGPITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYD 241

Length = 247

>gnl|CDD|178595 PLN03024, PLN03024, Putative EG45-like domain containing protein 1; Provisional

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 28/141 (19%)

Query: 16  LFFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTA 75
           +  F ++ V   +  Y    IA  TFY     S    G           +G   AA S +
Sbjct: 5   ILIFSTVLVFLFSVSYATPGIA--TFYTSYTPSACYRG---------TSFGVMIAAASDS 53

Query: 76  LFNNGLSCGACYEIRCAND----PQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQH 131
           L+NNG  CG  + ++C       P  C   ++TV   + CP   A +             
Sbjct: 54  LWNNGRVCGKMFTVKCKGPRNAVPHPCTGKSVTVKIVDHCPSGCAST------------- 100

Query: 132 FDLAQPSFLHIAQYRAGIVPV 152
            DL++ +F  IA   AGI+ +
Sbjct: 101 LDLSREAFAQIANPVAGIINI 121

Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	256
PLN00193	256	expansin-A; Provisional	100.0
PLN00050	247	expansin A; Provisional	100.0
PLN03023	247	Expansin-like B1; Provisional	100.0
COG4305	232	Endoglucanase C-terminal domain/subunit and relate	99.95
PLN03024	125	Putative EG45-like domain containing protein 1; Pr	99.95
smart00837	87	DPBB_1 Rare lipoprotein A (RlpA)-like double-psi b	99.93
PLN00115	118	pollen allergen group 3; Provisional	99.9
PF01357	82	Pollen_allerg_1: Pollen allergen; InterPro: IPR007	99.87
PF03330	78	DPBB_1: Rare lipoprotein A (RlpA)-like double-psi	99.77
PF00967	119	Barwin: Barwin family; InterPro: IPR001153 Barwin	99.08
PF07249	119	Cerato-platanin: Cerato-platanin; InterPro: IPR010	97.95
TIGR00413	208	rlpA rare lipoprotein A. This is a family of proka	97.91
COG0797	233	RlpA Lipoproteins [Cell envelope biogenesis, outer	97.78
PRK10672	361	rare lipoprotein A; Provisional	97.14
PF02015	201	Glyco_hydro_45: Glycosyl hydrolase family 45; Inte	88.78

>PLN00193 expansin-A; Provisional

Probab=100.00  E-value=2.1e-69  Score=480.51  Aligned_cols=246  Identities=70%  Similarity=1.260  Sum_probs=221.9

Q ss_pred             hHHHHHHHHHHHhhhhccc--CCCCceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEE
Q 025193           11 FPFLVLFFFISIFVHAING--DYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYE   88 (256)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~e   88 (256)
                      ++-|.|+|-+++.+..+.+  ..++|++|+|||||++++.++.+|||||+++...+++.++||+|+++|++|++||+|||
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~a~AT~Yg~~d~~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCye   84 (256)
T PLN00193          5 LLGLAILLQFCCYLFINVNAFTPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASCGQCYR   84 (256)
T ss_pred             hHHHHHHHHHHHHHHhhccCcCCCCceeeEEEEcCCCCCCCCCCcccCCCCccccCCCceeeecCHhHccCCccccCeEE
Confidence            3334444433444444333  55689999999999998888899999999988788899999999999999999999999


Q ss_pred             EEEcC--CCCCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCCce
Q 025193           89 IRCAN--DPQWCLPG-TITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGI  165 (256)
Q Consensus        89 V~c~~--~p~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~gni  165 (256)
                      |+|..  ++..|.++ +|+|+|||+||+++.+|++|++||.+++.|||||..||.+||....|+++|+||||+|+++|+|
T Consensus        85 v~C~~~~~~~~C~~g~sV~Vt~td~CP~n~~~~~~~ggwC~~~~~HFDLS~~AF~~iA~~~~Giv~V~yrRVpC~~~G~i  164 (256)
T PLN00193         85 IMCDYQADSRWCIKGASVTITATNFCPPNYALPNNNGGWCNPPLQHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGV  164 (256)
T ss_pred             EECCCCCCCccccCCCeEEEEEecCCCCcccccccCCCcCCCCCcccccCHHHHHHHhhhcCCeEeEEEEEeccccCCCc
Confidence            99952  35689876 9999999999999999999999999889999999999999999999999999999999999999


Q ss_pred             eEEEcCCccceEEEEEeecCCcceEEEEEEccCCceeecccCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCC
Q 025193          166 RFTINGHSYFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANW  245 (256)
Q Consensus       166 ~~~v~ss~~w~av~v~n~~g~~~I~sVeI~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvTs~~G~~v~~~~vipa~w  245 (256)
                      +|++++++||++|+|.|++|+++|++|+|++++++|++|+|.||++|+++.++.+.||+||||+.+|+++++.||||++|
T Consensus       165 ~f~v~gn~y~~~vlv~nv~G~gdV~~v~Ik~~~~~W~~M~R~wGa~W~~~~~l~g~plsfRvts~~G~~~~~~~viPa~W  244 (256)
T PLN00193        165 RFTINGRDYFELVLISNVGGAGSIQSVSIKGSKTGWMAMSRNWGANWQSNAYLDGQSLSFKVTTTDGQTRFFLNVVPANW  244 (256)
T ss_pred             EEEEcCCccEEEEEEEEeCCCccEEEEEEecCCCCeeECcccccceeEecCCCCCCCEEEEEEEcCCeEEEECceeCCCC
Confidence            99999999999999999999999999999998788999999999999998878777999999999999999999999999


Q ss_pred             CCCcEEecC-CC
Q 025193          246 KFGQTFEGS-QL  256 (256)
Q Consensus       246 ~~G~~y~~~-~~  256 (256)
                      ++|+||+++ ||
T Consensus       245 ~~G~ty~s~vqf  256 (256)
T PLN00193        245 GFGQTFSSSVQF  256 (256)
T ss_pred             CCCCeEecCccC
Confidence            999999998 97

>PLN00050 expansin A; Provisional

Probab=100.00  E-value=2.3e-69  Score=478.56  Aligned_cols=239  Identities=77%  Similarity=1.335  Sum_probs=220.2

Q ss_pred             HHHHHHhhhhcccCCCCceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCC
Q 025193           17 FFFISIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQ   96 (256)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~   96 (256)
                      .-||++|--.+ .+.++|..++|||||++++.++.+|||||+++..++++.++||+|+++|++|++||+||||+|.+++.
T Consensus         9 ~~~~~~~~~~~-~~~~~W~~a~AT~Yg~~dg~gt~gGACGYg~l~~~~~g~~~AAls~~lf~~G~~CGaCyeV~C~~~~~   87 (247)
T PLN00050          9 VALLSILKIVE-GYGSGWTGAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCVNDNI   87 (247)
T ss_pred             HHHhhhheecc-ccCCCccccEEEEcCCCCCCCCCCcccCCCCccccCCCceeeeccHhHccCCccccceEEEEcCCCCc
Confidence            33445553322 35678999999999999988889999999998878899999999999999999999999999976556


Q ss_pred             CcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCCceeEEEcCCccce
Q 025193           97 WCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFN  176 (256)
Q Consensus        97 ~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~gni~~~v~ss~~w~  176 (256)
                      .|.+++|+|+|||+||+++..|+++++||.+++.|||||..||.+||....|+++|+||||||+++|+|+|++++++||+
T Consensus        88 ~C~~gsV~V~itd~CP~~~~~~~~~~gwC~~~~~hFDLS~~AF~~iA~~~aGii~V~yRRVpC~~~G~i~f~v~g~sy~~  167 (247)
T PLN00050         88 WCLPGSIIITATNFCPPNLALPNNDGGWCNPPQQHFDLSQPVFQKIAQYKAGIVPVQYRRVACRKSGGIRFTINGHSYFN  167 (247)
T ss_pred             ccCCCcEEEEEecCCCCCcCcCccCCCcCCCCCcccccCHHHHHHHhhhcCCeeeeEEEEecCcCCCCeEEEEcCCceeE
Confidence            79889999999999999888888899999988999999999999999999999999999999999999999999888999


Q ss_pred             EEEEEeecCCcceEEEEEEccCCceeecccCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCCCcEEecCCC
Q 025193          177 LVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQL  256 (256)
Q Consensus       177 av~v~n~~g~~~I~sVeI~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~~~~  256 (256)
                      +|+|.|++|+++|++|+|++++++|++|+|+||++|+++.++.+.||+||||+.+|+++++.||||++|++|++|+++||
T Consensus       168 ~vlv~nv~G~gdi~~V~ikg~~~~W~~M~R~wGa~W~~~~~l~g~~lsfRvt~~~G~~~~~~~V~Pa~W~~G~ty~~~~f  247 (247)
T PLN00050        168 LVLITNVGGAGDIVAVSIKGSKSNWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVISNNAAPSNWAFGQTYTGMQF  247 (247)
T ss_pred             EEEEEEcCCCccEEEEEEecCCCCeeECccccCceeEccCCCCCCcEEEEEEecCCcEEEECceeCCCCCCCCeEecCcC
Confidence            99999999999999999999877899999999999999887777799999999999999999999999999999999988

>PLN03023 Expansin-like B1; Provisional

Probab=100.00  E-value=1.6e-62  Score=434.58  Aligned_cols=210  Identities=30%  Similarity=0.645  Sum_probs=189.6

Q ss_pred             CCCCceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeC
Q 025193           30 DYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATN  109 (256)
Q Consensus        30 ~~~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D  109 (256)
                      ..++|++++|||||++++.|+.+|||||+++..+.++.++||+| ++|++|++||+||||+|.+ +..|.+++|+|+|||
T Consensus        21 ~~~~W~~a~AT~Yg~~~g~gt~gGACGYg~~~~~~~g~~~aa~s-~Lf~~G~~CGaCy~irC~~-~~~C~~~~v~V~iTd   98 (247)
T PLN03023         21 KSQDFTYSRATYYGSPDCLGTPTGACGFGEYGRTVNGGNVAGVS-RLYRNGTGCGACYQVRCKA-PNLCSDDGVNVVVTD   98 (247)
T ss_pred             hcCCcccceEEEeCCCCCCCCCCccccCCccccCCCcceeeeeh-hhhcCCchhcccEEeecCC-CCccCCCCeEEEEEe
Confidence            34569999999999999888999999999987777888899999 9999999999999999976 668999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh-------cCCeeeEEEEEeecccCC-ceeEEEc--CC-ccceEE
Q 025193          110 FCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY-------RAGIVPVLFRRVPCVKKG-GIRFTIN--GH-SYFNLV  178 (256)
Q Consensus       110 ~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-------~~G~v~i~wr~V~C~~~g-ni~~~v~--ss-~~w~av  178 (256)
                      .||.           +   +.|||||..||.+||.+       ..|+|+|+||||||.++| +|+|+|+  ++ ++|++|
T Consensus        99 ~~~~-----------~---~~hFdLS~~AF~~iA~pg~~~~l~~aGiv~v~YrRVpC~~~G~~i~F~V~~~s~~p~yl~v  164 (247)
T PLN03023         99 YGEG-----------D---KTDFILSPRAYARLARPNMAAELFAYGVVDVEYRRIPCRYAGYNLFFKVHEHSRFPDYLAI  164 (247)
T ss_pred             CCCC-----------C---CCccccCHHHHHHHhCccccchhccCcEEEeEEEEEecccCCCceEEEEecCCCCCceEEE
Confidence            9985           3   58999999999999984       569999999999999999 9999998  43 789999


Q ss_pred             EEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCCCCCcceEEEEE--ecCCcE-EEEccccCCCCCCCcEEecC
Q 025193          179 LITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSYLDGQSLSFKVT--TSDGRT-ITSYNVVPANWKFGQTFEGS  254 (256)
Q Consensus       179 ~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~~~g~p~~vRvT--s~~G~~-v~~~~vipa~w~~G~~y~~~  254 (256)
                      +|.|++|+++|++|||++++ .+|++|+|+||++|+++.+|+| ||+||++  ..+|++ ++++||||++|++|+||+++
T Consensus       165 lv~~vgG~GdI~~V~Ik~~~~~~W~~M~rnwGa~W~~~~~l~G-p~slrf~v~~~~g~~~vva~nViPa~Wk~G~TY~s~  243 (247)
T PLN03023        165 VMLYQAGQNDILAVEIWQEDCKEWRGMRKAYGAVWDMPNPPKG-PITLRFQVSGSAGQTWVQAKNVIPSDWKAGVAYDSN  243 (247)
T ss_pred             EEEEcCCCccEEEEEEEecCCCCceECccCCcceeEcCCCCCC-ceeEEEEEEeCCCcEEEEECceeCCCCCCCCEEecc
Confidence            99999999999999999965 7899999999999999988987 6666664  457754 89999999999999999999


Q ss_pred             -CC
Q 025193          255 -QL  256 (256)
Q Consensus       255 -~~  256 (256)
                       ||
T Consensus       244 vq~  246 (247)
T PLN03023        244 IQL  246 (247)
T ss_pred             ccc
Confidence             87

>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]

Probab=99.95  E-value=6.8e-27  Score=194.87  Aligned_cols=181  Identities=21%  Similarity=0.320  Sum_probs=152.3

Q ss_pred             CceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCC----CCCCceEEEEEcCCCCCcCCCeEEEEEe
Q 025193           33 GWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG----LSCGACYEIRCANDPQWCLPGTITVTAT  108 (256)
Q Consensus        33 ~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~eV~c~~~p~~C~~~sv~v~V~  108 (256)
                      .-++|.|||-+..    .++||=-.   ++.+.+..+.|+++++-+-|    +.-|+..+|.+   |    +++.+|.||
T Consensus        29 ~~f~G~ATyTgsG----YsGGAflL---DPI~sd~eITAlNPaqlNlGGipAAmAGaYLrVqG---P----KG~TTVYVT   94 (232)
T COG4305          29 DLFEGYATYTGSG----YSGGAFLL---DPIPSDMEITALNPAQLNLGGIPAAMAGAYLRVQG---P----KGKTTVYVT   94 (232)
T ss_pred             cccceeEEEeccc----ccCceEEe---cCcCCcceeeecCHHHcccCCchhhhccceEEEEC---C----CCceEEEEe
Confidence            3468999977643    34777654   44455677999999888754    67999999998   5    678999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCCceeEEEc--CCccceEEEEEeecCC
Q 025193          109 NFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTIN--GHSYFNLVLITNVGGA  186 (256)
Q Consensus       109 D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~gni~~~v~--ss~~w~av~v~n~~g~  186 (256)
                      |..|++           .  .+.||||+.||.+|+++.+|+++|+||-|+-|.+||+.+++|  |+.||-+|||+||.- 
T Consensus        95 DlYPeg-----------a--sGaLDLSpNAFakIGnm~qGrIpvqWrvv~aPvtGN~~YRiKeGSs~WWAAIQVRnH~y-  160 (232)
T COG4305          95 DLYPEG-----------A--SGALDLSPNAFAKIGNMKQGRIPVQWRVVKAPVTGNFTYRIKEGSSRWWAAIQVRNHKY-  160 (232)
T ss_pred             cccccc-----------c--ccccccChHHHhhhcchhcCccceeEEEecccccccEEEEEecCCccceeeeeeecccC-
Confidence            999982           2  589999999999999999999999999999999999999998  678999999999975 


Q ss_pred             cceEEEEEEccCCceeecccCCCceEEeCCCCCCcceEEEEEecCCcEEEEc-cccCCC
Q 025193          187 GDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSY-NVVPAN  244 (256)
Q Consensus       187 ~~I~sVeI~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvTs~~G~~v~~~-~vipa~  244 (256)
                       ||.++|+... +.|..|...+||+|...+ +...|+.+|+||+.|+.++.. -.+|..
T Consensus       161 -PV~KlE~~qd-g~WinlpK~dYNhFVgT~-LG~~pL~~RmTDIRG~~l~DtlP~Lpk~  216 (232)
T COG4305         161 -PVMKLEYEQD-GKWINLPKMDYNHFVGTN-LGTGPLKVRMTDIRGKVLKDTLPKLPKS  216 (232)
T ss_pred             -ceEEEEEecC-CeEeeccccccceeeccc-cCCCceEEEEeecccceeeccccccccc
Confidence             9999999977 789999999999998655 443599999999999999876 245543

>PLN03024 Putative EG45-like domain containing protein 1; Provisional

Probab=99.95  E-value=6.7e-28  Score=194.07  Aligned_cols=109  Identities=30%  Similarity=0.607  Sum_probs=89.9

Q ss_pred             HHhhhhcccCCCCceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCC----CC
Q 025193           21 SIFVHAINGDYGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCAND----PQ   96 (256)
Q Consensus        21 ~~~~~~~~~~~~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~----p~   96 (256)
                      ..+.+++.+     .+|+||||++++     .||| |++   .+++.++||+|+++|++|..||+||||+|.+.    +.
T Consensus        13 ~~~~~~~~~-----~~G~AT~Y~~~~-----~gAC-~~~---~~~g~~iaAls~~lf~~G~~CG~c~~V~C~~~~~~~~~   78 (125)
T PLN03024         13 VFLFSVSYA-----TPGIATFYTSYT-----PSAC-YRG---TSFGVMIAAASDSLWNNGRVCGKMFTVKCKGPRNAVPH   78 (125)
T ss_pred             HHHhhhhcc-----cceEEEEeCCCC-----Cccc-cCC---CCCCCEeEEeCHHHcCCCcccCceEEEEECCCCccccc
Confidence            444444545     568999999764     5899 444   24678999999999999999999999999652    23


Q ss_pred             CcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEE
Q 025193           97 WCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRR  156 (256)
Q Consensus        97 ~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~  156 (256)
                      .|.+++|+|+|+|+||+.          |.   .|||||+.||.+||+++.|+++|+|.+
T Consensus        79 ~c~gksV~V~VtD~CP~~----------C~---~~~DLS~~AF~~iA~~~aG~v~V~y~~  125 (125)
T PLN03024         79 PCTGKSVTVKIVDHCPSG----------CA---STLDLSREAFAQIANPVAGIINIDYIP  125 (125)
T ss_pred             cccCCeEEEEEEcCCCCC----------CC---CceEcCHHHHHHhcCccCCEEEEEEeC
Confidence            688889999999999951          64   699999999999999999999999974

>smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Probab=99.93  E-value=1.9e-26  Score=174.93  Aligned_cols=86  Identities=80%  Similarity=1.495  Sum_probs=79.8

Q ss_pred             EEEechhccCCCCCCCceEEEEEcCCCCCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcC
Q 025193           69 TAALSTALFNNGLSCGACYEIRCANDPQWCLPG-TITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRA  147 (256)
Q Consensus        69 ~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~  147 (256)
                      +||+|+++|++|++||+||||+|.++|..|.++ +|+|+|||+||+.+..++++++||.+++.|||||..||.+||.+..
T Consensus         1 taA~s~~lf~~G~~CG~Cy~v~C~~~~~~C~~~~~V~V~vtd~CP~~~~~~~~~~~~C~~~~~hfDLS~~AF~~iA~~~~   80 (87)
T smart00837        1 TAALSTALFNNGASCGACYEIMCVDSPKWCKPGGSITVTATNFCPPNYALSNDNGGWCNPPRKHFDLSQPAFEKIAQYKA   80 (87)
T ss_pred             CcccCHHHccCCccccceEEEEeCCCCCcccCCCeEEEEEeccCCccccccccCCCccCCCCcCeEcCHHHHHHHhhhcC
Confidence            489999999999999999999997556789875 9999999999998888888899999889999999999999999999


Q ss_pred             CeeeEEE
Q 025193          148 GIVPVLF  154 (256)
Q Consensus       148 G~v~i~w  154 (256)
                      |+|+|+|
T Consensus        81 Gvi~v~y   87 (87)
T smart00837       81 GIVPVKY   87 (87)
T ss_pred             CEEeeEC
Confidence            9999987

Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood, but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse, and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.

>PLN00115 pollen allergen group 3; Provisional

Probab=99.90  E-value=1.5e-23  Score=166.95  Aligned_cols=90  Identities=21%  Similarity=0.397  Sum_probs=80.0

Q ss_pred             cccCCceeEEEc--CCccceEEEEEeecCCcceEEEEEEccC-Ccee-ecccCCCceEEeCC--CCCCcceEEEEEecCC
Q 025193          159 CVKKGGIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGSK-TGWQ-AMSRNWGQNWQSNS--YLDGQSLSFKVTTSDG  232 (256)
Q Consensus       159 C~~~gni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~g-~~W~-~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G  232 (256)
                      |..  +|+|+|+  ++++|+++++ |    ++|.+|||+++| .+|+ +|+|+||+.|++++  +|+| ||+||+|+.+|
T Consensus        22 ~g~--~v~F~V~~gSnp~yL~ll~-~----~dI~~V~Ik~~g~~~W~~~M~rswGavW~~~s~~pl~G-PlS~R~t~~~G   93 (118)
T PLN00115         22 CAT--EVTFKVGKGSSSTSLELVT-N----VAISEVEIKEKGAKDWVDDLKESSTNTWTLKSKAPLKG-PFSVRFLVKGG   93 (118)
T ss_pred             cCC--ceEEEECCCCCcceEEEEE-e----CCEEEEEEeecCCCcccCccccCccceeEecCCCCCCC-ceEEEEEEeCC
Confidence            643  8999998  5699997765 3    269999999986 6899 99999999999764  6787 99999999999


Q ss_pred             cEEEEccccCCCCCCCcEEecC-CC
Q 025193          233 RTITSYNVVPANWKFGQTFEGS-QL  256 (256)
Q Consensus       233 ~~v~~~~vipa~w~~G~~y~~~-~~  256 (256)
                      ++++++||||++||+|++|+++ ||
T Consensus        94 ~~~va~nViPa~Wk~G~tY~s~vq~  118 (118)
T PLN00115         94 GYRVVDDVIPESFKAGSVYKTGIQV  118 (118)
T ss_pred             CEEEECceECCCCCCCCEEeccccC
Confidence            9999999999999999999999 86

>PF01357 Pollen_allerg_1: Pollen allergen; InterPro: IPR007117 Expansins are unusual proteins that mediate cell wall extension in plants []

Probab=99.87  E-value=4.2e-22  Score=149.69  Aligned_cols=77  Identities=47%  Similarity=0.896  Sum_probs=64.1

Q ss_pred             eeEEEc--CCccceEEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeC-CCCCCcceEEEEEecC-CcEEEEcc
Q 025193          165 IRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSN-SYLDGQSLSFKVTTSD-GRTITSYN  239 (256)
Q Consensus       165 i~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~-~~~~g~p~~vRvTs~~-G~~v~~~~  239 (256)
                      |+|+|+  |++||++|+|.|++|.++|++|||++++ .+|++|+|.||++|+++ +++++ ||+||||+.+ |++++++|
T Consensus         1 v~f~V~~gS~~~~l~v~v~n~gG~gdi~~Vevk~~~s~~W~~m~r~wGa~W~~~~~~~~~-pls~Rvts~~~G~~vv~~n   79 (82)
T PF01357_consen    1 VRFTVKGGSNPYYLAVLVKNVGGDGDIKAVEVKQSGSGNWIPMKRSWGAVWQIDSNPPGG-PLSFRVTSGDSGQTVVADN   79 (82)
T ss_dssp             EEEEE-TT-BTTEEEEEEEECCTTS-EEEEEEEETTSSS-EE-EEECTTEEEEE-SS--S-SEEEEEEETTTSEEEEEEE
T ss_pred             CEEEECCCCCCcEEEEEEEEcCCCccEEEEEEEeCCCCCceEeecCcCceEEECCCCcCC-CEEEEEEEcCCCeEEEEec
Confidence            689998  4699999999999999999999999887 67999999999999998 56664 9999999977 99999999


Q ss_pred             ccC
Q 025193          240 VVP  242 (256)
Q Consensus       240 vip  242 (256)
                      |||
T Consensus        80 ViP   82 (82)
T PF01357_consen   80 VIP   82 (82)
T ss_dssp             EE-
T ss_pred             ccC
Confidence            998

They are believed to act as a sort of chemical grease, allowing polymers to slide past one another by disrupting non-covalent hydrogen bonds that hold many wall polymers to one another. This process is not degradative and hence does not weaken the wall, which could otherwise rupture under internal pressure during growth. Sequence comparisons indicate at least four distinct expansin cDNAs in rice and at least six in Arabidopsis. The proteins are highly conserved in size and sequence (75-95% amino acid sequence similarity between any pairwise comparison), and phylogenetic trees indicate that this multigene family formed before the evolutionary divergence of monocotyledons and dicotyledons []. Sequence and motif analyses show no similarities to known functional domains that might account for expansin action on wall extension. It is thought that several highly-conserved tryptophans may function in expansin binding to cellulose, or other glycans. The high conservation of the family indicates that the mechanism by which expansins promote wall extensin tolerates little variation in protein structure. Grass pollens, such as pollen from timothy grass, represent a major cause of type I allergy []. Interestingly, expansins share a high degree of sequence similarity with the Lol p I family of allergens. This entry represents the C-terminal domain.; PDB: 2VXQ_A 1WHP_A 1BMW_A 1WHO_A 2HCZ_X 2JNZ_A 3FT9_A 3FT1_C 1N10_B.

>PF03330 DPBB_1: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; InterPro: IPR009009 Beta barrels are commonly observed in protein structures

Probab=99.77  E-value=7.5e-19  Score=130.37  Aligned_cols=73  Identities=37%  Similarity=0.776  Sum_probs=61.4

Q ss_pred             EEEechhccCCCCCCCceEEEEEcC-CCCC--cCC--CeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhh
Q 025193           69 TAALSTALFNNGLSCGACYEIRCAN-DPQW--CLP--GTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIA  143 (256)
Q Consensus        69 ~aA~s~~~~~~g~~CG~C~eV~c~~-~p~~--C~~--~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la  143 (256)
                      +||++..+|++|..||+||+++|.. ....  |..  ++|+|+|+|+||+           |.  ..|||||+.||++|+
T Consensus         1 t~a~~~~~y~~g~~cG~~~~~~~~~~a~~~~~~~~~~ksV~v~V~D~Cp~-----------~~--~~~lDLS~~aF~~la   67 (78)
T PF03330_consen    1 TAAGSATWYDNGTACGQCYQVTCLTAASATGTCKVGNKSVTVTVVDRCPG-----------CP--PNHLDLSPAAFKALA   67 (78)
T ss_dssp             EEEE-HHHHGGGTTTT-EEEEEE---SSTT--BESEECEEEEEEEEE-TT-----------SS--SSEEEEEHHHHHHTB
T ss_pred             CeEEEhhhcCCCCcCCCeeeccccccCCccceEEecCCeEEEEEEccCCC-----------Cc--CCEEEeCHHHHHHhC
Confidence            5899999999999999999999932 1222  777  8999999999998           87  599999999999999


Q ss_pred             hhcCCeeeEEE
Q 025193          144 QYRAGIVPVLF  154 (256)
Q Consensus       144 ~~~~G~v~i~w  154 (256)
                      .++.|+++|+|
T Consensus        68 ~~~~G~i~V~w   78 (78)
T PF03330_consen   68 DPDAGVIPVEW   78 (78)
T ss_dssp             STTCSSEEEEE
T ss_pred             CCCceEEEEEC
Confidence            99999999999

They are classified in terms of two integral parameters: the number of strands in the sheet, n, and the shear number, S, a measure of the stagger of the strands in the beta-sheet. These two parameters have been shown to determine the major geometrical features of beta-barrels. Six-stranded beta-barrels with a pseudo-twofold axis are found in several proteins. One involving parallel strands forming two psi structures is known as the double-psi barrel. The first psi structure consists of the loop connecting strands beta1 and beta2 (a 'psi loop') and the strand beta5, whereas the second psi structure consists of the loop connecting strands beta4 and beta5 and the strand beta2. All the psi structures in double-psi barrels have a unique handedness, in that beta1 (beta4), beta2 (beta5) and the loop following beta5 (beta2) form a right-handed helix. The unique handedness may be related to the fact that the twisting angle between the parallel pair of strands is always larger than that between the antiparallel pair [].; PDB: 1N10_B 3D30_A 2BH0_A 2HCZ_X.

>PF00967 Barwin: Barwin family; InterPro: IPR001153 Barwin is a basic protein isolated from aqueous extracts of barley seeds

Probab=99.08  E-value=1.3e-10  Score=91.31  Aligned_cols=60  Identities=27%  Similarity=0.492  Sum_probs=44.8

Q ss_pred             CCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh----hcCCeeeEEE
Q 025193           79 NGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ----YRAGIVPVLF  154 (256)
Q Consensus        79 ~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~----~~~G~v~i~w  154 (256)
                      ....||+|++||.+..     +.+++|+|+|+|+.                ++|||.+.+|++|-.    ...|.+.|.|
T Consensus        56 gq~~CGkClrVTNt~t-----ga~~~~RIVDqCsn----------------GGLDld~~vF~~iDtdG~G~~~Ghl~V~y  114 (119)
T PF00967_consen   56 GQDSCGKCLRVTNTAT-----GAQVTVRIVDQCSN----------------GGLDLDPTVFNQIDTDGQGYAQGHLIVDY  114 (119)
T ss_dssp             SGGGTT-EEEEE-TTT-------EEEEEEEEE-SS----------------SSEES-SSSHHHH-SSSHHHHHTEEEEEE
T ss_pred             CcccccceEEEEecCC-----CcEEEEEEEEcCCC----------------CCcccChhHHhhhccCCcccccceEEEEE
Confidence            4568999999998753     45999999999886                689999999999942    4679999999


Q ss_pred             EEeec
Q 025193          155 RRVPC  159 (256)
Q Consensus       155 r~V~C  159 (256)
                      ++|+|
T Consensus       115 ~fV~C  119 (119)
T PF00967_consen  115 EFVDC  119 (119)
T ss_dssp             EEE--
T ss_pred             EEEcC
Confidence            99999

It is 125 amino acids in length, and contains six cysteine residues that combine to form three disulphide bridges [, ]. Comparative analysis shows the sequence to be highly similar to a 122 amino acid stretch in the C-terminal of the products of two wound-induced genes (win1 and win2) from potato, the product of the hevein gene of rubber trees, and pathogenesis-related protein 4 from tobacco. The high levels of similarity to these proteins, and their ability to bind saccharides, suggest that the barwin domain may be involved in a common defence mechanism in plants.; GO: 0042742 defense response to bacterium, 0050832 defense response to fungus; PDB: 1BW3_A 1BW4_A.

>PF07249 Cerato-platanin: Cerato-platanin; InterPro: IPR010829 Cerato-platanin (CP) is the first member of the cerato-platanin family

Probab=97.95  E-value=6.3e-05  Score=60.26  Aligned_cols=66  Identities=18%  Similarity=0.364  Sum_probs=46.7

Q ss_pred             eEEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh--
Q 025193           68 NTAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ--  144 (256)
Q Consensus        68 ~~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~--  144 (256)
                      .|.+... +-|+ +..||.|+|++-.       +++|.|..+|.=+                 ..|+|+.+||+.|.+  
T Consensus        44 ~IGg~~~V~gWn-S~~CGtC~~lty~-------g~si~vlaID~a~-----------------~gfnis~~A~n~LT~g~   98 (119)
T PF07249_consen   44 YIGGAPAVAGWN-SPNCGTCWKLTYN-------GRSIYVLAIDHAG-----------------GGFNISLDAMNDLTNGQ   98 (119)
T ss_dssp             SEEEETT--STT--TTTT-EEEEEET-------TEEEEEEEEEE-S-----------------SSEEE-HHHHHHHHTS-
T ss_pred             eeccccccccCC-CCCCCCeEEEEEC-------CeEEEEEEEecCC-----------------CcccchHHHHHHhcCCc
Confidence            3555554 4564 5789999999984       3499999999732                 469999999999976  


Q ss_pred             -hcCCeeeEEEEEee
Q 025193          145 -YRAGIVPVLFRRVP  158 (256)
Q Consensus       145 -~~~G~v~i~wr~V~  158 (256)
                       ...|+|+++|++|+
T Consensus        99 a~~lG~V~a~~~qV~  113 (119)
T PF07249_consen   99 AVELGRVDATYTQVD  113 (119)
T ss_dssp             CCCC-EEE-EEEEE-
T ss_pred             ccceeEEEEEEEEcC
Confidence             35799999999996

It is produced by the Ascomycete Ceratocystis fimbriata f. sp. platani and causes the severe plant disease: canker stain. This protein occurs in the cell wall of the fungus and is involved in the host-plane interaction and induces both cell necrosis and phytoalexin synthesis which is one of the first plant defense-related events. CP, like other fungal surface proteins, is able to self assemble in vitro []. CP is a 120 amino acid protein, containing 40% hydrophobic residues and two S-S bridges. It contains four cysteine residues that form two disulphide bonds []. The N-terminal region of CP is very similar to cerato-ulmin, a phytotoxic protein produced by the Ophiostoma species belonging to the hydrophobin family, which also self-assembles []. This entry also includes other precursor proteins.; PDB: 2KQA_A 3M3G_A.

>TIGR00413 rlpA rare lipoprotein A

Probab=97.91  E-value=0.00011  Score=63.96  Aligned_cols=95  Identities=18%  Similarity=0.135  Sum_probs=67.8

Q ss_pred             EEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCC
Q 025193           37 AHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYA  116 (256)
Q Consensus        37 g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~  116 (256)
                      |.|+|||+.-..  ..-|.|-...    ...++||-.      ....|..++|+...+     +.+|+|+|.|++|-.  
T Consensus         1 G~ASwYg~~f~G--~~TAnGe~y~----~~~~tAAHk------tLPlgT~V~VtNl~n-----grsviVrVnDRGPf~--   61 (208)
T TIGR00413         1 GLASWYGPKFHG--RKTANGEVYN----MKALTAAHK------TLPFNTYVKVTNLHN-----NRSVIVRINDRGPFS--   61 (208)
T ss_pred             CEEeEeCCCCCC--CcCCCCeecC----CCccccccc------cCCCCCEEEEEECCC-----CCEEEEEEeCCCCCC--
Confidence            679999963210  1234432111    112344433      236799999998764     559999999999962  


Q ss_pred             CCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeeccc
Q 025193          117 LSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVK  161 (256)
Q Consensus       117 ~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~  161 (256)
                                 +.--+|||..|+.+|+-...|+.+|+.+.+....
T Consensus        62 -----------~gRiIDLS~aAA~~Lg~~~~G~a~V~vevl~~~~   95 (208)
T TIGR00413        62 -----------DDRIIDLSHAAAREIGLISRGVGQVRIEVLHVAK   95 (208)
T ss_pred             -----------CCCEEECCHHHHHHcCCCcCceEEEEEEEEecCC
Confidence                       1357999999999999999999999999998764

This is a family of prokaryotic proteins with unknown function. Lipoprotein annotation based on the presence of consensus lipoprotein signal sequence. Included in this family is the E. coli putative lipoprotein rlpA.

>COG0797 RlpA Lipoproteins [Cell envelope biogenesis, outer membrane]

Probab=97.78  E-value=0.00019  Score=63.50  Aligned_cols=60  Identities=12%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             CCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeecc
Q 025193           83 CGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCV  160 (256)
Q Consensus        83 CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~  160 (256)
                      =|.-.+|+..++     +.+|+|+|.|++|-            .. .-.+|||..|+++|+-...|+.+|..+.+.+.
T Consensus       119 ~~t~v~VtNl~N-----grsvvVRINDRGPf------------~~-gRiIDlS~aAA~~l~~~~~G~a~V~i~~l~~~  178 (233)
T COG0797         119 LPTYVRVTNLDN-----GRSVVVRINDRGPF------------VS-GRIIDLSKAAADKLGMIRSGVAKVRIEVLGVA  178 (233)
T ss_pred             CCCEEEEEEccC-----CcEEEEEEeCCCCC------------CC-CcEeEcCHHHHHHhCCccCceEEEEEEEeccc
Confidence            377789998875     56999999999995            22 36799999999999999999999999999875

>PRK10672 rare lipoprotein A; Provisional

Probab=97.14  E-value=0.0056  Score=57.60  Aligned_cols=60  Identities=13%  Similarity=0.040  Sum_probs=48.6

Q ss_pred             CCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeec
Q 025193           82 SCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPC  159 (256)
Q Consensus        82 ~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C  159 (256)
                      .-|..++|+...+     +++|+|+|.|++|-.             +.--+|||..|+.+|.-...+.|+|+.-.|.=
T Consensus       114 Plps~vrVtNl~n-----grsvvVrVnDRGP~~-------------~gRiiDLS~aAA~~Lg~~~~~~V~ve~i~v~~  173 (361)
T PRK10672        114 PIPSYVRVTNLAN-----GRMIVVRINDRGPYG-------------PGRVIDLSRAAADRLNTSNNTKVRIDPIIVAP  173 (361)
T ss_pred             CCCCEEEEEECCC-----CcEEEEEEeCCCCCC-------------CCCeeEcCHHHHHHhCCCCCceEEEEEEeeCC
Confidence            4688999999764     569999999999962             13569999999999988777788888777733

>PF02015 Glyco_hydro_45: Glycosyl hydrolase family 45; InterPro: IPR000334 O-Glycosyl hydrolases 3

Probab=88.78  E-value=0.48  Score=41.28  Aligned_cols=54  Identities=33%  Similarity=0.381  Sum_probs=31.2

Q ss_pred             EEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChH
Q 025193           69 TAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQP  137 (256)
Q Consensus        69 ~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~  137 (256)
                      +||++-.-......|++|||++=++.+  -.+++.+|++++.=-+   +          ..+||||.-.
T Consensus        70 faA~~~~G~~e~~~Cc~Cy~LtFt~g~--l~GKkmiVQ~tNtG~d---l----------g~n~FDl~iP  123 (201)
T PF02015_consen   70 FAAASITGGSESSWCCACYELTFTSGP--LKGKKMIVQVTNTGGD---L----------GSNQFDLAIP  123 (201)
T ss_dssp             EEEEE-TT--HHHHTT-EEEEEE-SST--TTT-EEEEEEEEE-TT---T----------TTTEEEEE-T
T ss_pred             eeeeeecCCCCCCcccceEEEEEcCCC--cCCCEeEEEecccCCC---C----------CCCeEEEEeC
Confidence            566653222233679999999987643  2345999999986322   1          2588998753

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 45 GH45 from CAZY comprises enzymes with only one known activity; endoglucanase (3.2.1.4 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases, cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produce a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family K or as the glycosyl hydrolases family 45 []. The best conserved regions in these enzymes is located in the N-terminal section. It contains an aspartic acid residue which has been shown [] to act as a nucleophile in the catalytic mechanism. This also has several cysteines that are involved in forming disulphide bridges.; GO: 0008810 cellulase activity, 0005975 carbohydrate metabolic process; PDB: 1OA7_A 1OA9_A 1L8F_A 1HD5_A 4ENG_A 3ENG_A 2ENG_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	256
2hcz_X	245	Crystal Structure Of Expb1 (Zea M 1), A Beta-Expans		1e-20
1n10_A	241	Crystal Structure Of Phl P 1, A Major Timothy Grass		2e-18

>pdb|2HCZ|X Chain X, Crystal Structure Of Expb1 (Zea M 1), A Beta-Expansin And Group-1 Pollen Allergen From Maize Length = 245

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 32  GGWQIAHATFYGGSDASGTM--GGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEI 89
           G W  A AT+YG  + +G    GGACG  N+    Y   TA  +  +F +G  CG+CYE+
Sbjct: 17  GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEV 76
Query: 90  RCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQ--HFDLAQPSFLHIAQ--- 144
           RC   P+ C    +TV  T+    NY            P+   HFDL+  +F  +A+   
Sbjct: 77  RCKEKPE-CSGNPVTVYITDM---NYE-----------PIAPYHFDLSGKAFGSLAKPGL 121
Query: 145 ----YRAGIVPVLFRRVPCVKKGGIRFTINGHSYFN----LVLITNVGGAGDVKAVFIKG 196
                  GI+ V FRRV C    G +   +     N     VL+  V   GD+  + I+ 
Sbjct: 122 NDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQD 181
Query: 197 SKTG-WQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSYNVVPANWK 246
             +  W+ M  +WG  W+ ++   L G   S ++T+  G+ + + +V+PANW+
Sbjct: 182 KLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWR 233

>pdb|1N10|A Chain A, Crystal Structure Of Phl P 1, A Major Timothy Grass Pollen Allergen Length = 241

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 111/243 (45%), Gaps = 31/243 (12%)
Query: 27  INGDYGG-WQIAHATFYGGSDASGTM--GGACGYGNLYSQGYGTNTAALSTALFNNGLSC 83
           I   YG  W  A +T+YG    +G    GGACGY ++    +   T   +T +F +G  C
Sbjct: 11  ITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGC 70
Query: 84  GACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIA 143
           G+C+EI+C   P+ C    + V           +++DN     P   HFDL+  +F  +A
Sbjct: 71  GSCFEIKCTK-PEACSGEPVVV----------HITDDNEEPIAP--YHFDLSGHAFGAMA 117
Query: 144 Q-------YRAGIVPVLFRRVPCVKKGGIRFTINGHSYFN----LVLITNVGGAGDVKAV 192
           +         AG + + FRRV C    G + T +     N     +L+  V G GDV AV
Sbjct: 118 KKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAV 177
Query: 193 FIKGS-KTGWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQ 249
            IK   K  W  +  +WG  W+ ++   L G   + + TT  G    + +V+P  WK   
Sbjct: 178 DIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADT 236
Query: 250 TFE 252
           ++E
Sbjct: 237 SYE 239

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	256
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	2e-75
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	6e-73
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	2e-63
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	1e-35
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	3e-34
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	5e-32
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	6e-28

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays} Length = 245

 Score =  228 bits (582), Expect = 2e-75
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 30/239 (12%)

Query: 32  GGWQIAHATFYGGSDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEI 89
           G W  A AT+YG  + +G    GGACG  N+    Y   TA  +  +F +G  CG+CYE+
Sbjct: 17  GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEV 76

Query: 90  RCANDPQWCLPG-TITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ---- 144
           RC   P+      T+ +T  N+ P                  HFDL+  +F  +A+    
Sbjct: 77  RCKEKPECSGNPVTVYITDMNYEPIAP--------------YHFDLSGKAFGSLAKPGLN 122

Query: 145 ---YRAGIVPVLFRRVPCVKKGGIRFTINGHSYFN----LVLITNVGGAGDVKAVFIKGS 197
                 GI+ V FRRV C    G +   +     N     VL+  V   GD+  + I+  
Sbjct: 123 DKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDK 182

Query: 198 KTG-WQAMSRNWGQNWQSNSYLD-GQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEGS 254
            +  W+ M  +WG  W+ ++        S ++T+  G+ + + +V+PANW+    +  +
Sbjct: 183 LSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYTSN 241

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3 Length = 241

 Score =  222 bits (565), Expect = 6e-73
 Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 29/245 (11%)

Query: 25  HAINGDYGG-WQIAHATFYGGSDASGTM--GGACGYGNLYSQGYGTNTAALSTALFNNGL 81
             I   YG  W  A +T+YG    +G    GGACGY ++    +   T   +T +F +G 
Sbjct: 9   PNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGR 68

Query: 82  SCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLH 141
            CG+C+EI+C   P+ C    + V  T+                     HFDL+  +F  
Sbjct: 69  GCGSCFEIKC-TKPEACSGEPVVVHITDDNE------------EPIAPYHFDLSGHAFGA 115

Query: 142 IAQ-------YRAGIVPVLFRRVPCVKKGGIRFTIN----GHSYFNLVLITNVGGAGDVK 190
           +A+         AG + + FRRV C    G + T +     +  +  +L+  V G GDV 
Sbjct: 116 MAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVV 175

Query: 191 AVFIK-GSKTGWQAMSRNWGQNWQSNSYLD-GQSLSFKVTTSDGRTITSYNVVPANWKFG 248
           AV IK   K  W  +  +WG  W+ ++        + + TT  G    + +V+P  WK  
Sbjct: 176 AVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTTEGGTKTEAEDVIPEGWKAD 235

Query: 249 QTFEG 253
            ++E 
Sbjct: 236 TSYES 240

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A Length = 208

 Score =  196 bits (499), Expect = 2e-63
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 39/227 (17%)

Query: 31  YGGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLS----CGAC 86
           Y      +AT+ G     G  GGA     + S        A++ A  N G       G+ 
Sbjct: 3   YDDLHEGYATYTGS----GYSGGAFLLDPIPSDME---ITAINPADLNYGGVKAALAGSY 55

Query: 87  YEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYR 146
            E+           G  TV  T+  P                    DL+  +F  I   +
Sbjct: 56  LEVEGPK-------GKTTVYVTDLYPE-----------GAR--GALDLSPNAFRKIGNMK 95

Query: 147 AGIVPVLFRRVPCVKKGGIRFTINGHS--YFNLVLITNVGGAGDVKAVFIKGSKTGWQAM 204
            G + + +R V     G   + I   S  ++  + + N      V  +  +     W  M
Sbjct: 96  DGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKYP--VMKMEYEKDGK-WINM 152

Query: 205 SRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTF 251
            +    ++ S +     SL  ++T   G+ +   + +P   + G + 
Sbjct: 153 EKMDYNHFVSTNLG-TGSLKVRMTDIRGKVVK--DTIPKLPESGTSK 196

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense} Length = 108

 Score =  122 bits (307), Expect = 1e-35
 Identities = 16/106 (15%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 154 FRRVPCVKKGGIRFTINGHS--YFNLVLITNVGGAGDVKAVFIKGSKTG-WQAMSRNWGQ 210
                 V+   + FT+   S     ++ I        +  V ++   +  W+ +++  G 
Sbjct: 7   HHHGSAVQ---VTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GN 62

Query: 211 NWQSNSYLDGQ-SLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
            W+  S        +F+  +  G       V+P  +  G+T++  +
Sbjct: 63  VWEVKSSKPLVGPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKPEE 108

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A Length = 96

 Score =  118 bits (296), Expect = 3e-34
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)

Query: 165 IRFTIN-GHSYFNLVLITNVGGAGDVKAVFIKGSKTG-WQAMSRNWGQNWQSNSYLDGQ- 221
           + FT+  G +  +L ++    G   +  V ++   +  W AM++  G  W  +S    Q 
Sbjct: 4   VTFTVEKGSNEKHLAVLVKYEG-DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG 62

Query: 222 SLSFKVTTSDGRTITSYNVVPANWKFGQTFEGSQ 255
             +F+  T  G      +VVP  +  G T+   +
Sbjct: 63  PFNFRFLTEKGMKNVFDDVVPEKYTIGATYAPEE 96

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} PDB: 3ft9_A Length = 100

 Score =  112 bits (281), Expect = 5e-32
 Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 165 IRFTINGHS--YFNLVLITNVGGAGDVKAVFIKGSKTG-WQAMSRNWGQNWQSNSYLDGQ 221
           + FT+   S     ++ I        +  V ++   +  W+ +++  G  W+  S     
Sbjct: 4   VTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLV 62

Query: 222 -SLSFKVTTSDGRTITSYNVVPANWKFGQTFEG 253
              +F+  +  G       V+P  +  G+T++ 
Sbjct: 63  GPFNFRFMSKGGMRNVFDEVIPTAFSIGKTYKP 95

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1 Length = 181

 Score =  104 bits (260), Expect = 6e-28
 Identities = 38/173 (21%), Positives = 50/173 (28%), Gaps = 38/173 (21%)

Query: 31  YGGWQIAHATFYGGSDASGTMGGACGYGNL-----YSQGYGTNTAALSTALFNN------ 79
           Y G   A  T Y  S       GACG G       +    G+  AA S   F++      
Sbjct: 11  YNGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWC 65

Query: 80  GLSCGACYEIRCANDPQWCLPG------TITVTATNFCPPNYALSNDNGGWCNPPLQ--- 130
           G  CG C ++           G      + T   TN CP  Y     N  WCN   Q   
Sbjct: 66  GQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYP----NQDWCNQGSQYGG 121

Query: 131 --------HFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYF 175
                   H DL       +           +  V C  +         +S +
Sbjct: 122 HNKYGYELHLDLENG-RSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMY 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	256
1n10_A	241	PHL P I, pollen allergen PHL P 1; plant allergen,	100.0
2hcz_X	245	Beta-expansin 1A; domain 1 is A beta barrel and do	100.0
3d30_A	208	YOAJ, expansin like protein; peptidoglycan associa	100.0
1wc2_A	181	Endoglucanase; hydrolase, cellulase, cellulose, do	99.97
3ft1_A	100	PHL P 3 allergen; beta-barrel; 1.79A {Phleum prate	99.95
2jnz_A	108	PHL P 3 allergen; timothy grass pollen; NMR {Phleu	99.94
1bmw_A	96	PHL P II, pollen allergen PHL P2; allergy, immunog	99.91
1bw3_A	125	Barwin, basic barley SEED protein; lectin; NMR {Ho	99.68
4avr_A	95	PA4485; unknown function, GRAM-negative bacteria,	99.29
2kqa_A	129	Cerato-platanin; elicitor, secreted, toxin; NMR {C	97.86
3sul_A	122	Cerato-platanin-like protein; double PSI beta barr	97.83
3m3g_A	120	EPL1 protein; fungal, plant defense, fungus, polys	97.78
3suj_A	127	Cerato-platanin 1; double PSI beta barrel, unknown	97.7
3suk_A	125	Cerato-platanin-like protein; double PSI beta barr	97.64
3sum_A	136	Cerato-platanin-like protein; double PSI beta barr	97.62
2eng_A	210	Endoglucanase V; cellulose degradation, hydrolase	94.06

>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3

Probab=100.00  E-value=1.2e-63  Score=441.66  Aligned_cols=211  Identities=30%  Similarity=0.593  Sum_probs=189.1

Q ss_pred             CCCCceEEEEEEecCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEE
Q 025193           30 DYGGWQIAHATFYGGSDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTA  107 (256)
Q Consensus        30 ~~~~~~~g~aT~Y~~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V  107 (256)
                      ++++|+.|+||||+++++.++  .+|||||++++..|++.++||+|+++|++|+.||+||||+|.+++ .|.+++|+|+|
T Consensus        15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~-~C~~~~v~V~V   93 (241)
T 1n10_A           15 YGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPE-ACSGEPVVVHI   93 (241)
T ss_dssp             CCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSST-TBCSCCEEEEE
T ss_pred             ccCCceeeEEEEeCCCCCCCcCCCCeeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCC-ccCCCCEEEEE
Confidence            678999999999999887666  789999999887888999999999999999999999999998754 69999999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh-------hcCCeeeEEEEEeecccCC--ceeEEEc--CCccce
Q 025193          108 TNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ-------YRAGIVPVLFRRVPCVKKG--GIRFTIN--GHSYFN  176 (256)
Q Consensus       108 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-------~~~G~v~i~wr~V~C~~~g--ni~~~v~--ss~~w~  176 (256)
                      ||+|+            |++++.|||||+.||.+||.       ...|+++|+||||+|+++|  ||+|+++  +++||+
T Consensus        94 tD~C~------------C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~  161 (241)
T 1n10_A           94 TDDNE------------EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYL  161 (241)
T ss_dssp             EEECS------------SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEE
T ss_pred             eEecC------------CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceE
Confidence            99995            65567999999999999999       6899999999999999984  8999999  689999


Q ss_pred             EEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCcEEec
Q 025193          177 LVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSY--LDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG  253 (256)
Q Consensus       177 av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~  253 (256)
                      +|||+|++|.++|++|||++++ +.|++|+|+||++|+++..  +.+ ||+||||+.+|++|+++||||++|++|++|++
T Consensus       162 ~vlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~  240 (241)
T 1n10_A          162 ALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYES  240 (241)
T ss_dssp             EEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEEEEECSSCCSSEEEEC
T ss_pred             EEEEEecCCCCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCC-CEEEEEEEeCCcEEEEccccCCCCCCCCEEeC
Confidence            9999999988999999999987 6899999999999999875  676 99999999999999999999999999999998


Q ss_pred             C
Q 025193          254 S  254 (256)
Q Consensus       254 ~  254 (256)
                      +
T Consensus       241 ~  241 (241)
T 1n10_A          241 K  241 (241)
T ss_dssp             -
T ss_pred             C
Confidence            4

>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}

Probab=100.00  E-value=9.2e-64  Score=443.62  Aligned_cols=213  Identities=32%  Similarity=0.647  Sum_probs=197.0

Q ss_pred             CCCCceEEEEEEecCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEE
Q 025193           30 DYGGWQIAHATFYGGSDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTA  107 (256)
Q Consensus        30 ~~~~~~~g~aT~Y~~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V  107 (256)
                      +.++|+.|+||||+++++.++  .+|||||++++..|++.++||+|+++|++|+.||+||||+|.++ ..|.+++|+|+|
T Consensus        15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~-~~C~~~sv~V~V   93 (245)
T 2hcz_X           15 YNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEK-PECSGNPVTVYI   93 (245)
T ss_dssp             CCCCCEEEEEEECSCTTSCSSTTSCCTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSS-SSBCSSCEEEEE
T ss_pred             cCCceeeeEEEEeCCCCCCCcCCCCccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCC-CccCCCCEEEEE
Confidence            678999999999999887666  68999999988778899999999999999999999999999874 479989999999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh-------hcCCeeeEEEEEeecccCC--ceeEEEc--CCccce
Q 025193          108 TNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ-------YRAGIVPVLFRRVPCVKKG--GIRFTIN--GHSYFN  176 (256)
Q Consensus       108 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-------~~~G~v~i~wr~V~C~~~g--ni~~~v~--ss~~w~  176 (256)
                      ||+||+            ++++.|||||+.||++||.       ...|+++|+||||+|+++|  ||+|+++  +++||+
T Consensus        94 tD~C~C------------~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~  161 (245)
T 2hcz_X           94 TDMNYE------------PIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYL  161 (245)
T ss_dssp             EEECCC------------TTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCC
T ss_pred             EeccCC------------CCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceE
Confidence            999984            3357999999999999999       6899999999999999983  7999998  689999


Q ss_pred             EEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEccccCCCCCCCcEEec
Q 025193          177 LVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSY--LDGQSLSFKVTTSDGRTITSYNVVPANWKFGQTFEG  253 (256)
Q Consensus       177 av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvTs~~G~~v~~~~vipa~w~~G~~y~~  253 (256)
                      +|||+|++|+++|++|||++++ +.|++|+|+||++|+++..  +.+ ||+||||+.+|++|+++||||++|++|++|++
T Consensus       162 avlv~n~~g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~g-pls~RvT~~~G~~v~~~nViP~~w~~g~ty~~  240 (245)
T 2hcz_X          162 AVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKG-PFSIRLTSESGKKVIAKDVIPANWRPDAVYTS  240 (245)
T ss_dssp             CEEEECCCTTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCS-SCCEEEEETTSCEEEESCSCCSSCCTTCEEEC
T ss_pred             EEEEEecCCCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCC-CEEEEEEEeCCcEEEEeeeecCCCCCCCEEeC
Confidence            9999999988999999999987 5899999999999999875  676 99999999999999999999999999999999


Q ss_pred             C-CC
Q 025193          254 S-QL  256 (256)
Q Consensus       254 ~-~~  256 (256)
                      + ||
T Consensus       241 ~~qf  244 (245)
T 2hcz_X          241 NVQF  244 (245)
T ss_dssp             SCCC
T ss_pred             cccc
Confidence            8 98

>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A

Probab=100.00  E-value=9.3e-53  Score=365.27  Aligned_cols=192  Identities=20%  Similarity=0.279  Sum_probs=173.8

Q ss_pred             CCceEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCC----CCCCceEEEEEcCCCCCcCCCeEEEEE
Q 025193           32 GGWQIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG----LSCGACYEIRCANDPQWCLPGTITVTA  107 (256)
Q Consensus        32 ~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g----~~CG~C~eV~c~~~p~~C~~~sv~v~V  107 (256)
                      ++.+.|+||||++..    .+||||+..   .+++.++||+|..+|++|    ..||+||||+|.       +++|+|+|
T Consensus         4 ~~~~~G~aT~Y~~g~----~~GACG~~~---~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~-------~gsv~V~v   69 (208)
T 3d30_A            4 DDLHEGYATYTGSGY----SGGAFLLDP---IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP-------KGKTTVYV   69 (208)
T ss_dssp             TCCEEEEEEECSTTS----SSCTTCCCC---CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET-------TEEEEEEE
T ss_pred             CCcEEEEEEEcCCCC----CCCcCCCCC---CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC-------CCcEEEEE
Confidence            456899999999753    379999864   356789999999999987    799999999993       35899999


Q ss_pred             eCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCCceeEEEc--CCccceEEEEEeecC
Q 025193          108 TNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTIN--GHSYFNLVLITNVGG  185 (256)
Q Consensus       108 ~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~gni~~~v~--ss~~w~av~v~n~~g  185 (256)
                      +|+||.           |.  ..|||||+.||.+||.++.|+++|+||+|+|+++|+|+|+++  +++||++|||+|+++
T Consensus        70 ~D~CP~-----------C~--~~~~DLS~~aF~~la~~~~G~i~v~~~~V~C~~~G~i~f~v~~Gs~~~~~~v~v~n~~g  136 (208)
T 3d30_A           70 TDLYPE-----------GA--RGALDLSPNAFRKIGNMKDGKINIKWRVVKAPITGNFTYRIKEGSSRWWAAIQVRNHKY  136 (208)
T ss_dssp             EEECTT-----------CC--TTCEEECHHHHHHHSCGGGSSEEEEEEEECCCCCSCCEEEECTTCSSSEEEEEEESCSS
T ss_pred             EECCCC-----------CC--CCeEECCHHHHHHhcccCCCEEEEEEEEeCCCCCCceeEEEcCCCCCceEEEEEEecCC
Confidence            999998           95  599999999999999999999999999999999999999999  799999999999987


Q ss_pred             CcceEEEEEEccCCceeecccCCCceEEeCCCCCCcceEEEEEecCCcEEEEccccCCCCCC----CcEEecC-CC
Q 025193          186 AGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQSLSFKVTTSDGRTITSYNVVPANWKF----GQTFEGS-QL  256 (256)
Q Consensus       186 ~~~I~sVeI~~~g~~W~~m~r~~g~~W~~~~~~~g~p~~vRvTs~~G~~v~~~~vipa~w~~----G~~y~~~-~~  256 (256)
                        +|++|||+++ +.|++|+|+++|+|..+..+. .||+||||+.+|++|  .+|||++|++    |.+|+++ ||
T Consensus       137 --~v~~v~i~~~-~~W~~m~r~~~n~~~~~~~~~-~pls~rvT~~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf  206 (208)
T 3d30_A          137 --PVMKMEYEKD-GKWINMEKMDYNHFVSTNLGT-GSLKVRMTDIRGKVV--KDTIPKLPESGTSKAYTVPGHVQF  206 (208)
T ss_dssp             --CEEEEEEEET-TEEEEEEECTTSCEEEECCCS-SSEEEEEEETTCCEE--EEEECCCCSSCCSSCEEEECCCCC
T ss_pred             --CEEEEEEecC-CcEEEccccccceeecCCCCC-CCEEEEEEECCCCEE--EEEECCCCccCcccceEEeCcCcc
Confidence              8999999988 689999999999898765444 599999999999999  7999999997    8999999 98

>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1

Probab=99.97  E-value=6.2e-31  Score=220.23  Aligned_cols=125  Identities=27%  Similarity=0.438  Sum_probs=104.3

Q ss_pred             CCceEEEEEEecCCCCCCCCccccCCC-----cCCCCCCCCeEEEechhccCCC------CCCCceEEEEEcCCC-----
Q 025193           32 GGWQIAHATFYGGSDASGTMGGACGYG-----NLYSQGYGTNTAALSTALFNNG------LSCGACYEIRCANDP-----   95 (256)
Q Consensus        32 ~~~~~g~aT~Y~~~~~~~~~~GaCGy~-----~~~~~~~~~~~aA~s~~~~~~g------~~CG~C~eV~c~~~p-----   95 (256)
                      .+|..++||||++..     +|||||+     ++.+++++.++||+|+++|++|      +.||+||||+|.+++     
T Consensus        12 ~g~~~A~aT~Yg~~~-----gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg   86 (181)
T 1wc2_A           12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (181)
T ss_dssp             TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceeEecCCC-----CcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence            469999999999864     7999999     4555567889999999999997      899999999997643     


Q ss_pred             CCcCCC-eEEEEEeCCCCCCCCCCCCCCCCCCCC-----------CCCeeeChHHHHHhhhhcCCeeeEEEEEeecccCC
Q 025193           96 QWCLPG-TITVTATNFCPPNYALSNDNGGWCNPP-----------LQHFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKG  163 (256)
Q Consensus        96 ~~C~~~-sv~v~V~D~Cp~~~~~~~~~~~~C~~~-----------~~~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~g  163 (256)
                      ..|..+ +|+|||||+||.+    ++|++||.++           +.||||+..| .+||....|+++|+||||+|+..+
T Consensus        87 ~~~~~g~SI~VtaTN~CPpn----~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~~~~GivpV~yrrV~C~~~~  161 (181)
T 1wc2_A           87 GPVREGLSKTFMITNLCPNI----YPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTGMGWNNPETTWEVVNCDSEH  161 (181)
T ss_dssp             CCCCTTCEEEEEEEEEECSS----TTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGGGTCSSEEEEEEEECHHHHH
T ss_pred             ccCCCCCeEEEEEecCCCCC----CCCCCccCCCcccCcccccCccccccccchH-HHhhhhcCCCceeEEEEEeCCCCC
Confidence            224445 8999999999953    3578999753           6899999999 899998999999999999998744


Q ss_pred             cee
Q 025193          164 GIR  166 (256)
Q Consensus       164 ni~  166 (256)
                      ++.
T Consensus       162 ~~~  164 (181)
T 1wc2_A          162 NHD  164 (181)
T ss_dssp             HHC
T ss_pred             CcC
Confidence            443

>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A

Probab=99.95  E-value=3e-28  Score=188.02  Aligned_cols=91  Identities=19%  Similarity=0.392  Sum_probs=86.2

Q ss_pred             ceeEEEc--CCccceEEEEEeecCCcceEEEEEEccCC-ceeecccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025193          164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGSKT-GWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSY  238 (256)
Q Consensus       164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~g~-~W~~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G~~v~~~  238 (256)
                      +|+|+|+  |++||++|+|.|++|+++|.+|||+++++ .|++|+| ||+.|+++.  +|.| ||+||||+.+|++++++
T Consensus         3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~G-plSfRvt~~~G~~~v~~   80 (100)
T 3ft1_A            3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD   80 (100)
T ss_dssp             EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCS-SEEEEEEETTCCEEEEE
T ss_pred             CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence            7999998  68999999999999999999999999984 7999999 999999986  6887 99999999999999999


Q ss_pred             cccCCCCCCCcEEecC-CC
Q 025193          239 NVVPANWKFGQTFEGS-QL  256 (256)
Q Consensus       239 ~vipa~w~~G~~y~~~-~~  256 (256)
                      ||||++|++|++|+++ ||
T Consensus        81 nViPa~W~~G~ty~s~vq~   99 (100)
T 3ft1_A           81 EVIPTAFSIGKTYKPEEQE   99 (100)
T ss_dssp             EEECTTCCTTCEECCCCBC
T ss_pred             eEeCCCCCCCcEEeccccc
Confidence            9999999999999999 76

>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}

Probab=99.94  E-value=1.5e-26  Score=180.47  Aligned_cols=89  Identities=18%  Similarity=0.418  Sum_probs=83.8

Q ss_pred             ceeEEEc--CCccceEEEEEeecCCcceEEEEEEc-cCCceeecccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025193          164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKG-SKTGWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSY  238 (256)
Q Consensus       164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~-~g~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G~~v~~~  238 (256)
                      ||.|+|+  |++||++|+|.|++|+++|++|||++ +...|++|+|. |++|+++.  +|.| ||+||||+.+|++++++
T Consensus        14 ~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~G-plSfRvtts~G~~~va~   91 (108)
T 2jnz_A           14 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVG-PFNFRFMSKGGMRNVFD   91 (108)
T ss_dssp             EEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCS-SEEEEEEETTTEEEEEE
T ss_pred             cEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCC-CEEEEEEEcCCcEEEEC
Confidence            8999998  78999999999999999999999997 44789999999 99999986  7887 99999999999999999


Q ss_pred             cccCCCCCCCcEEecC
Q 025193          239 NVVPANWKFGQTFEGS  254 (256)
Q Consensus       239 ~vipa~w~~G~~y~~~  254 (256)
                      ||||++|++|+||+++
T Consensus        92 nViPa~W~~Gqty~s~  107 (108)
T 2jnz_A           92 EVIPTAFSIGKTYKPE  107 (108)
T ss_dssp             EEECSSCCTTCEECCC
T ss_pred             eEECCCCCCCCEEeCC
Confidence            9999999999999985

>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A

Probab=99.91  E-value=2.2e-26  Score=176.42  Aligned_cols=88  Identities=25%  Similarity=0.468  Sum_probs=81.5

Q ss_pred             ceeEEEc--CCccceEEEEEeecCCcceEEEEEEcc-CCceeecccCCCceEEeCC--CCCCcceEEEEEecCCcEEEEc
Q 025193          164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGS-KTGWQAMSRNWGQNWQSNS--YLDGQSLSFKVTTSDGRTITSY  238 (256)
Q Consensus       164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~-g~~W~~m~r~~g~~W~~~~--~~~g~p~~vRvTs~~G~~v~~~  238 (256)
                      +|+|+|+  |++||++|+|.|++  ++|++|||+++ .+.|++|+|.||++|+++.  +|.| ||+||||+.+|++++++
T Consensus         3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~G-plSfRvt~~~G~~~v~~   79 (96)
T 1bmw_A            3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD   79 (96)
T ss_dssp             CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCC-CCCBCCEETTTEECCBS
T ss_pred             CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCC-CEEEEEEEcCCcEEEEe
Confidence            7899998  79999999999998  58999999995 4789999999999999987  5677 99999999999999999


Q ss_pred             cccCCCCCCCcEEecC
Q 025193          239 NVVPANWKFGQTFEGS  254 (256)
Q Consensus       239 ~vipa~w~~G~~y~~~  254 (256)
                      ||||++|++|++|+++
T Consensus        80 nViP~~W~~G~ty~~~   95 (96)
T 1bmw_A           80 DVVPEKYTIGATYAPE   95 (96)
T ss_dssp             SCSCSSCCSSSCCCC-
T ss_pred             eEeCCCCCCCCEEeCC
Confidence            9999999999999985

>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A

Probab=99.68  E-value=3.1e-17  Score=130.57  Aligned_cols=62  Identities=24%  Similarity=0.499  Sum_probs=55.7

Q ss_pred             CCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeC-hHHHHHhhh----hcCCeeeE
Q 025193           78 NNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLA-QPSFLHIAQ----YRAGIVPV  152 (256)
Q Consensus        78 ~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS-~~AF~~la~----~~~G~v~i  152 (256)
                      +++..||+|++|++..+     +++|+|+|+|+||.           |     +|||| +.||++|+.    ++.|+++|
T Consensus        58 ~~g~~CG~cv~Vtn~~n-----GksV~V~VvD~CP~-----------g-----gLDLS~~~AF~~Ia~~g~G~~~G~i~V  116 (125)
T 1bw3_A           58 RGQAACGKCLRVTNPAT-----GAQITARIVDQCAN-----------G-----GLDLDWDTVFTKIDTNGIGYQQGHLNV  116 (125)
T ss_dssp             CSGGGTTCEEEEEETTT-----TEEEEEEEEECCSS-----------S-----SCCSCSSSSHHHHCSSCHHHHHSEEEE
T ss_pred             CCCcccCCEEEeEeCCC-----CCEEEEEEEEeCCC-----------C-----CCCCCCHHHHHHHhccCCcccCcEEEE
Confidence            77889999999999642     45999999999997           4     49999 999999998    78999999


Q ss_pred             EEEEeecc
Q 025193          153 LFRRVPCV  160 (256)
Q Consensus       153 ~wr~V~C~  160 (256)
                      +|++|+|+
T Consensus       117 ~w~~V~C~  124 (125)
T 1bw3_A          117 NYQFVDCR  124 (125)
T ss_dssp             EEEEECCC
T ss_pred             EEEEEeCC
Confidence            99999996

>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}

Probab=99.29  E-value=3.2e-11  Score=91.61  Aligned_cols=94  Identities=20%  Similarity=0.273  Sum_probs=73.4

Q ss_pred             eEEEEEEecCCCCCCCCccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCC
Q 025193           35 QIAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPN  114 (256)
Q Consensus        35 ~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~  114 (256)
                      ..|.|+||++.-.  -...|||-...    ...++||-.      ...||..++|+...+     +++|+|+|.|+||. 
T Consensus         2 ~~G~ASwYg~~f~--G~~TA~Ge~~~----~~~~tAAH~------tlP~gt~vrVtNl~n-----GksVvVrVnDRGP~-   63 (95)
T 4avr_A            2 DTGEASYYGSRHA--GLRTASGERYN----PNAMTAAHR------TLPFGARVRVTNLDN-----RRSVVVRINDRGPF-   63 (95)
T ss_dssp             EEEEEEECCGGGT--TSBCTTSCBCC----TTSCEEECS------SSCTTCEEEEEETTT-----CCEEEEEEEECCCC-
T ss_pred             CEEEEEEECCccC--CCCCCCccCcC----CCCCEEEcC------CCCCCcEEEEEECCC-----CcEEEEEEccCCCC-
Confidence            4799999996321  13588875432    234677765      347999999998764     56999999999998 


Q ss_pred             CCCCCCCCCCCCCCCCCeeeChHHHHHhhhhcCCeeeEEEEEee
Q 025193          115 YALSNDNGGWCNPPLQHFDLAQPSFLHIAQYRAGIVPVLFRRVP  158 (256)
Q Consensus       115 ~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~~~G~v~i~wr~V~  158 (256)
                                |.+  ..+|||..||++|+..+.|+.+|+|+.+.
T Consensus        64 ----------~~g--riIDLS~aAa~~Lg~~~~G~~~V~ve~~~   95 (95)
T 4avr_A           64 ----------RRG--RIIDVSRKAAEGLGMIRSGVAPVRIESLD   95 (95)
T ss_dssp             ----------STT--EEEEECHHHHHHHTCTTTSCEEEEEEEC-
T ss_pred             ----------CCC--CEEEeCHHHHHHhCCcCCCEEEEEEEEeC
Confidence                      763  67999999999999999999999999863

>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}

Probab=97.86  E-value=5.2e-05  Score=60.18  Aligned_cols=66  Identities=21%  Similarity=0.428  Sum_probs=53.3

Q ss_pred             EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhh-hc
Q 025193           69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQ-YR  146 (256)
Q Consensus        69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~-~~  146 (256)
                      |.+... +-|+ ...||.|+||+-..      +++|.|+.+|.=+                 ..|+++..||+.|.. ..
T Consensus        52 IGga~~iagWN-S~~CGtC~~lty~n------g~sI~vlaID~A~-----------------~gFnIs~~Amn~LT~G~~  107 (129)
T 2kqa_A           52 VGGIPDIAGWD-SPSCGTCWKVTIPN------GNSIFIRGVDSGR-----------------GGFNVNPTAFTKLVGSTE  107 (129)
T ss_dssp             EEEETTCCSTT-CTTCSCEEEEEETT------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHSSSS
T ss_pred             eccchhhccCC-CCCCCceEEEEEcC------CCEEEEEEEccCC-----------------CceeehHHHHHHhcCCcc
Confidence            555544 3466 78999999999831      4599999999733                 469999999999987 56


Q ss_pred             CCee-eEEEEEee
Q 025193          147 AGIV-PVLFRRVP  158 (256)
Q Consensus       147 ~G~v-~i~wr~V~  158 (256)
                      .|+| +++|++|+
T Consensus       108 lG~V~~a~~~qV~  120 (129)
T 2kqa_A          108 AGRVDNVNYVQVD  120 (129)
T ss_dssp             SCCBCSCEEEECC
T ss_pred             cCcEeEEEEEEcC
Confidence            8999 99999996

>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}

Probab=97.83  E-value=5.6e-05  Score=59.59  Aligned_cols=67  Identities=25%  Similarity=0.402  Sum_probs=52.4

Q ss_pred             EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193           69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY--  145 (256)
Q Consensus        69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~--  145 (256)
                      |.+... +-|++ ..||.|+|++-...     +++|.|..+|.=+                 ..|+|+.+||+.|.+-  
T Consensus        46 IGg~~~V~gwnS-~~CGtC~~lty~~~-----g~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a  102 (122)
T 3sul_A           46 VGAVDTITGWNS-ESCGTCYQITWSGT-----GKTIHVVGVDVAG-----------------NGFNVGQRAMDDLTNGQA  102 (122)
T ss_dssp             EEEETTCCSTTC-TTTTCEEEEEETTT-----TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred             cccccccccCCC-CCCCceEEEEEcCC-----CcEEEEEEEecCC-----------------CceeehHHHHHHhcCCcc
Confidence            544443 44665 89999999998531     3499999999743                 4599999999999752  


Q ss_pred             -cCCeeeEEEEEee
Q 025193          146 -RAGIVPVLFRRVP  158 (256)
Q Consensus       146 -~~G~v~i~wr~V~  158 (256)
                       ..|+|++++++|+
T Consensus       103 ~~lG~V~a~~~qV~  116 (122)
T 3sul_A          103 VALGNIDVTATLVD  116 (122)
T ss_dssp             HHHSEEEEEEEEEC
T ss_pred             eecceEeEEEEEcC
Confidence             4599999999997

>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}

Probab=97.78  E-value=7e-05  Score=58.88  Aligned_cols=65  Identities=25%  Similarity=0.424  Sum_probs=51.2

Q ss_pred             EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193           69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY--  145 (256)
Q Consensus        69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~--  145 (256)
                      |.+... .-|+ ...||.|+|++-.       +++|.|..+|.=+                 ..|+|+.+||+.|..-  
T Consensus        46 IGg~~~i~gwn-s~~CGtC~~lty~-------g~si~vlaID~a~-----------------~Gfnis~~A~n~LT~G~a  100 (120)
T 3m3g_A           46 IGGAAAVAGWN-SASCGTCWKLQYS-------GHTIYVLAVDHAA-----------------SGFNIALDAMNALTGGQA  100 (120)
T ss_dssp             EEEETTCCSTT-CTTTTCEEEEEET-------TEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred             cccccccccCC-CCCCCceEEEEEC-------CeEEEEEEEecCC-----------------CceeecHHHHHHhhCCcc
Confidence            555443 3465 4789999999984       3499999999743                 4599999999999752  


Q ss_pred             -cCCeeeEEEEEee
Q 025193          146 -RAGIVPVLFRRVP  158 (256)
Q Consensus       146 -~~G~v~i~wr~V~  158 (256)
                       ..|+|++++++|+
T Consensus       101 ~~lG~V~a~~~~V~  114 (120)
T 3m3g_A          101 VQLGRVSATATQVP  114 (120)
T ss_dssp             HHHCEEECEEEEEC
T ss_pred             eeeeeEeEEEEEcC
Confidence             4599999999997

>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.70  E-value=6.3e-05  Score=59.72  Aligned_cols=70  Identities=23%  Similarity=0.414  Sum_probs=52.1

Q ss_pred             EEEec-hhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193           69 TAALS-TALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY--  145 (256)
Q Consensus        69 ~aA~s-~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~--  145 (256)
                      |.+.. -.-|+ ...||.|+|++-.+..  =..++|.|..+|.=+                 ..|+|+.+||+.|.+-  
T Consensus        46 IGg~~~i~gwn-s~~CGtC~~lty~g~~--~~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~g~a  105 (127)
T 3suj_A           46 IGGSSDIAGYN-SPNCGSCYQLTYSSAH--TTPKSIYMVAIDRSA-----------------EGFTASKQAMDDLTNKRA  105 (127)
T ss_dssp             EEEETTCCSTT-CTTTTCEEEEEECCSS--SCCEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred             eccccccccCC-CCCCCceEEEEECCCC--CcceEEEEEEEecCC-----------------CceeecHHHHHHhcCCcc
Confidence            55443 24465 4789999999986410  012499999999743                 4599999999999753  


Q ss_pred             -cCCeeeEEEEEee
Q 025193          146 -RAGIVPVLFRRVP  158 (256)
Q Consensus       146 -~~G~v~i~wr~V~  158 (256)
                       ..|+|+++|++|+
T Consensus       106 ~~lG~V~~~~~~V~  119 (127)
T 3suj_A          106 EELGTVNVDVRKVD  119 (127)
T ss_dssp             HHHSSEEEEEEEEC
T ss_pred             ccceeEEEEEEEeC
Confidence             4589999999997

>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}

Probab=97.64  E-value=0.00014  Score=57.60  Aligned_cols=69  Identities=25%  Similarity=0.405  Sum_probs=52.0

Q ss_pred             EEEech-hccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh--
Q 025193           69 TAALST-ALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY--  145 (256)
Q Consensus        69 ~aA~s~-~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~--  145 (256)
                      |.+... .-|+ ...||.|+|++-.+ |.  ..++|.|..+|.=+                 ..|+|+.+||+.|.+-  
T Consensus        47 IGg~~~i~gwn-S~~CGtC~~lty~g-~~--~~~si~vlaID~a~-----------------~Gfnis~~Amn~LT~G~a  105 (125)
T 3suk_A           47 IGASSDIGGFN-SPACGNCYTISFTF-QG--VTRSINLVAIDHAG-----------------NGFNVAQAAMDELTNGNA  105 (125)
T ss_dssp             EEEETTCCSTT-CTTTTCEEEEEEEE-TT--EEEEEEEEEEEECS-----------------SSEEECHHHHHHHHTSCH
T ss_pred             eccccccccCC-CCCCCeeEEEEEcC-CC--cceEEEEEEEecCC-----------------CceeecHHHHHHhcCCcc
Confidence            555443 4465 47899999999854 10  02499999999743                 4599999999999762  


Q ss_pred             -cCCeeeEEEEEee
Q 025193          146 -RAGIVPVLFRRVP  158 (256)
Q Consensus       146 -~~G~v~i~wr~V~  158 (256)
                       ..|+|+++|++|+
T Consensus       106 ~~lG~V~~~~~~V~  119 (125)
T 3suk_A          106 VALGTIDVQSQQVA  119 (125)
T ss_dssp             HHHCEEEEEEEEEC
T ss_pred             cccceEeEEEEEcC
Confidence             4599999999997

>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}

Probab=97.62  E-value=0.00019  Score=57.28  Aligned_cols=64  Identities=16%  Similarity=0.217  Sum_probs=50.6

Q ss_pred             eEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCC-CeeeChHHHHHhhhh-
Q 025193           68 NTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQ-HFDLAQPSFLHIAQY-  145 (256)
Q Consensus        68 ~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~-~~DLS~~AF~~la~~-  145 (256)
                      .|.++.   |+ ...||.|+||+-.       +++|.|..+|.=.+                + -|||+..||+.|..- 
T Consensus        49 ~igg~~---wn-s~~CGtCwkLtY~-------G~sI~vlaID~a~~----------------g~~FnIs~~Amn~LT~G~  101 (136)
T 3sum_A           49 HFVAAP---EA-QTECGSCWKLRYK-------GNHAFVTVVDRVEE----------------ANLFVGGTDLVKNLTTFN  101 (136)
T ss_dssp             SEEECC---BT-TBCTTCEEEEEET-------TEEEEEEEEECCCS----------------TTEEEECHHHHHHHTCBT
T ss_pred             cccccc---cC-CCCCCceEEEEEC-------CeEEEEEEEecCCC----------------cceEeehHHHHHHHhCCC
Confidence            366665   54 5789999999984       34999999997432                2 299999999999752 


Q ss_pred             ------cCCeeeE-EEEEee
Q 025193          146 ------RAGIVPV-LFRRVP  158 (256)
Q Consensus       146 ------~~G~v~i-~wr~V~  158 (256)
                            ..|+|++ +|++|+
T Consensus       102 ~a~~a~elG~Vda~~~~qVd  121 (136)
T 3sum_A          102 GAPEGYDWGTAQLFSAYQVD  121 (136)
T ss_dssp             TBCHHHHHSEEECSEEEEEC
T ss_pred             ccccceecceeeeeEEEEcC
Confidence                  3599999 999997

>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A

Probab=94.06  E-value=0.035  Score=47.24  Aligned_cols=53  Identities=32%  Similarity=0.347  Sum_probs=34.5

Q ss_pred             EEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeCh
Q 025193           69 TAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQ  136 (256)
Q Consensus        69 ~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~  136 (256)
                      +||++-.--.....|++|||++=++.+  ..+++.+|+||+...+-             ..+||||.-
T Consensus        72 FaA~~~~g~~e~~~Cc~C~~LtFt~~~--~~GKkmiVQ~TNtG~Dl-------------~~n~FDl~i  124 (210)
T 2eng_A           72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGDL-------------GSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred             eeeeeccCCccccccceeEEEEEcCCC--cCCCEEEEEEecccCCC-------------CCCceeEec
Confidence            566653211223579999999988643  44679999999987651             258999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	256
d1wc2a1	180	b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mu	4e-52
d1n10a2	143	b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-t	3e-47
d1n10a1	95	b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {T	2e-36
d1whoa_	94	b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum praten	2e-30

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 180

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

 Score =  165 bits (419), Expect = 4e-52
 Identities = 38/174 (21%), Positives = 51/174 (29%), Gaps = 38/174 (21%)

Query: 31  YGGWQIAHATFYGGSDASGTMGGACGYGNL-----YSQGYGTNTAALSTALFNN------ 79
           Y G   A  T Y  S       GACG G       +    G+  AA S   F++      
Sbjct: 11  YNGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWC 65

Query: 80  GLSCGACYEIRCANDPQWCLPG------TITVTATNFCPPNYALSNDNGGWCNPPLQ--- 130
           G  CG C ++           G      + T   TN CP  Y     N  WCN   Q   
Sbjct: 66  GQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIY----PNQDWCNQGSQYGG 121

Query: 131 --------HFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKGGIRFTINGHSYFN 176
                   H DL +     +           +  V C  +         +S + 
Sbjct: 122 HNKYGYELHLDL-ENGRSQVTGMGWNNPETTWEVVNCDSEHNHDHRTPSNSMYG 174

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 143

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  151 bits (383), Expect = 3e-47
 Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 9/143 (6%)

Query: 25  HAINGDYG-GWQIAHATFYGGSDASGTM--GGACGYGNLYSQGYGTNTAALSTALFNNGL 81
             I   YG  W  A +T+YG    +G    GGACGY ++    +   T   +T +F +G 
Sbjct: 7   PNITATYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGR 66

Query: 82  SCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLH 141
            CG+C+EI+C   P+ C    + V  T+                +     F         
Sbjct: 67  GCGSCFEIKC-TKPEACSGEPVVVHITDDNEE-----PIAPYHFDLSGHAFGAMAKKGDE 120

Query: 142 IAQYRAGIVPVLFRRVPCVKKGG 164
                AG + + FRRV C    G
Sbjct: 121 QKLRSAGELELQFRRVKCKYPEG 143

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 95

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  122 bits (308), Expect = 2e-36
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 165 IRFTINGHS--YFNLVLITNVGGAGDVKAVFIKGSKTG-WQAMSRNWGQNWQSNSYLDGQ 221
           + F +   S   +  +L+  V G GDV AV IK      W  +  +WG  W+ ++     
Sbjct: 3   VTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLT 62

Query: 222 -SLSFKVTTSDGRTITSYNVVPANWKFGQTFE 252
              + + TT  G    + +V+P  WK   ++E
Sbjct: 63  GPFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 94

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]} Length = 94

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

 Score =  106 bits (267), Expect = 2e-30
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 165 IRFTINGHS--YFNLVLITNVGGAGDVKAVFIKGSKTGWQAMSRNWGQNWQSNSYLDGQ- 221
           + FT+   S      VL+   G       +   GS   W AM++  G  W  +S    Q 
Sbjct: 4   VTFTVEKGSNEKHLAVLVKYEGDTMAEVELREHGSDE-WVAMTKGEGGVWTFDSEEPLQG 62

Query: 222 SLSFKVTTSDGRTITSYNVVPANWKFGQTFE 252
             +F+  T  G      +VVP  +  G T+ 
Sbjct: 63  PFNFRFLTEKGMKNVFDDVVPEKYTIGATYA 93

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	256
d1n10a2	143	Pollen allergen PHL P 1 N-terminal domain {Timothy	100.0
d1wc2a1	180	Endoglucanase (CMCase) {Blue mussel (Mytilus eduli	100.0
d1n10a1	95	PHL P 1 C-terminal domain {Timothy grass (Phleum p	99.95
d1whoa_	94	PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 1	99.93
d1bw3a_	125	Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}	98.74
d2enga_	210	Endoglucanase V (Eng V) {Humicola insolens [TaxId:	90.56

>d1n10a2 b.52.1.3 (A:1003-1145) Pollen allergen PHL P 1 N-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Pollen allergen PHL P 1 N-terminal domain
domain: Pollen allergen PHL P 1 N-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=100.00  E-value=3.6e-36  Score=244.91  Aligned_cols=122  Identities=32%  Similarity=0.594  Sum_probs=104.1

Q ss_pred             cCCCCceEEEEEEecCCCCCCC--CccccCCCcCCCCCCCCeEEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEE
Q 025193           29 GDYGGWQIAHATFYGGSDASGT--MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVT  106 (256)
Q Consensus        29 ~~~~~~~~g~aT~Y~~~~~~~~--~~GaCGy~~~~~~~~~~~~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~  106 (256)
                      .+.++|++|+||||+.+++.++  .+|||||++++..|++.++||+|+++|++|..||+||||+|.+ +..|.+++|+|+
T Consensus        12 ~~~~~w~~g~AT~Yg~~~~~~~~~~gGACGyg~~~~~p~g~~~aAls~~l~~~g~~CG~cyev~c~~-~~~c~~~sv~V~   90 (143)
T d1n10a2          12 TYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-PEACSGEPVVVH   90 (143)
T ss_dssp             BCCCSCEEEEEEEEC----------CCTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-STTBCSCCEEEE
T ss_pred             ccCCCcEeeEEeEeCCCCCCCCCCCcccCCCCCcccCCCcceEEEeCHhHccCCCcCCcceEeEcCC-CCcccCCCEEEE
Confidence            3789999999999998776543  4799999998877888999999999999999999999999987 468988999999


Q ss_pred             EeCCCCCCCCCCCCCCCCCCCCCCCeeeChHHHHHhhhh-------cCCeeeEEEEEeecccCC
Q 025193          107 ATNFCPPNYALSNDNGGWCNPPLQHFDLAQPSFLHIAQY-------RAGIVPVLFRRVPCVKKG  163 (256)
Q Consensus       107 V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~~AF~~la~~-------~~G~v~i~wr~V~C~~~g  163 (256)
                      |||.||+           |. +..|||||+.||.+||++       +.|+|+|+||||+|+++|
T Consensus        91 vtd~c~~-----------~~-~~~hfDLS~~AF~~iA~~~~~~~~~~~Giv~V~yRrV~C~~~g  142 (143)
T d1n10a2          91 ITDDNEE-----------PI-APYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPE  142 (143)
T ss_dssp             EEEECSS-----------CS-SSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCT
T ss_pred             EEecccC-----------CC-CCccccCCHHHHhhhccccchhhheecCccceEEEEEeccCCC
Confidence            9999996           43 358999999999999985       579999999999999986

>d1wc2a1 b.52.1.1 (A:1-180) Endoglucanase (CMCase) {Blue mussel (Mytilus edulis) [TaxId: 6550]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase (CMCase)
species: Blue mussel (Mytilus edulis) [TaxId: 6550]

Probab=100.00  E-value=2.2e-35  Score=246.70  Aligned_cols=135  Identities=27%  Similarity=0.413  Sum_probs=112.8

Q ss_pred             CCceEEEEEEecCCCCCCCCccccCCCcCCCC-----CCCCeEEEechhccCC------CCCCCceEEEEEcCCCC----
Q 025193           32 GGWQIAHATFYGGSDASGTMGGACGYGNLYSQ-----GYGTNTAALSTALFNN------GLSCGACYEIRCANDPQ----   96 (256)
Q Consensus        32 ~~~~~g~aT~Y~~~~~~~~~~GaCGy~~~~~~-----~~~~~~aA~s~~~~~~------g~~CG~C~eV~c~~~p~----   96 (256)
                      .+|+.+++|||+.++     +|||||+++...     +++.++||+|+++|++      |+.||+||||||.+++.    
T Consensus        12 ~g~~~A~aT~Ygd~~-----~GACGyG~~~~~~~~~~g~G~~tAAlS~~lf~~~~~~~~G~~CG~CyeV~C~~~~~~~~~   86 (180)
T d1wc2a1          12 NGKSCASTTNYHDSH-----KGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG   86 (180)
T ss_dssp             TTEEEEEEEEECCCB-----CTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred             CCccccceEEeCCCC-----CCCCCCCcCCCCCccccCCcceEeeccHHHhcCCcccccccccCCEEEEEECCCCCCccC
Confidence            589999999999764     699999997432     2457899999999999      88999999999986422    


Q ss_pred             -CcC-CCeEEEEEeCCCCCCCCCCCCCCCCCCCCCC-----------CeeeChHHHHHhhhhcCCeeeEEEEEeecccCC
Q 025193           97 -WCL-PGTITVTATNFCPPNYALSNDNGGWCNPPLQ-----------HFDLAQPSFLHIAQYRAGIVPVLFRRVPCVKKG  163 (256)
Q Consensus        97 -~C~-~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~-----------~~DLS~~AF~~la~~~~G~v~i~wr~V~C~~~g  163 (256)
                       .|. +++|+|||||+||.++    .|++||.+++.           ||||+ .+|.+||....|+|+|+||+|+|+..+
T Consensus        87 ~~~~~g~sV~V~iTd~CP~n~----~n~gWCn~p~~~~~~n~~g~~~HFDLs-~af~~ia~~~~G~v~V~yrrV~C~~~g  161 (180)
T d1wc2a1          87 GPVREGLSKTFMITNLCPNIY----PNQDWCNQGSQYGGHNKYGYELHLDLE-NGRSQVTGMGWNNPETTWEVVNCDSEH  161 (180)
T ss_dssp             CCCCTTCEEEEEEEEEECSST----TSTTTSCCSSSSSCCCTTSCSEEEEEE-CTTSTTGGGTCSSEEEEEEEECHHHHH
T ss_pred             CCCCCCCcEEEEEEecCCCCC----CCCCccCCccccccccccCcccceech-HHHHHHhhhcCCcceeEEEEeeCCCcc
Confidence             222 3399999999999753    46789986533           99997 599999999999999999999999999


Q ss_pred             ceeEEEcCCccce
Q 025193          164 GIRFTINGHSYFN  176 (256)
Q Consensus       164 ni~~~v~ss~~w~  176 (256)
                      ++++++.++++|-
T Consensus       162 ~~~~~~~~n~~~~  174 (180)
T d1wc2a1         162 NHDHRTPSNSMYG  174 (180)
T ss_dssp             HHCTTSCCHHHHT
T ss_pred             cccccccCCcchh
Confidence            9998888887773

>d1n10a1 b.7.3.1 (A:1146-1240) PHL P 1 C-terminal domain {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 1 C-terminal domain
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.95  E-value=2.5e-28  Score=185.31  Aligned_cols=89  Identities=27%  Similarity=0.597  Sum_probs=82.7

Q ss_pred             ceeEEEc--CCccceEEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCCC--CCcceEEEEEecCCcEEEEc
Q 025193          164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSYL--DGQSLSFKVTTSDGRTITSY  238 (256)
Q Consensus       164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~~--~g~p~~vRvTs~~G~~v~~~  238 (256)
                      +|+|+|+  |||||++|+|.|++|+++|.+|||++++ ++|++|+|++|++|+++.++  ++ ||+||||+.+|++++++
T Consensus         2 ~i~F~v~~gsnp~~lav~v~n~~g~gdI~~vevk~~g~~~W~~m~r~~ga~W~~~~~~~~~g-pls~Rvt~~~G~~~v~~   80 (95)
T d1n10a1           2 KVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAE   80 (95)
T ss_dssp             CCEEEECTTCBTTEEEEEEECCCCSSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCS-CEEEEEEESSSCEEEEE
T ss_pred             cEEEEECCCCCcceEEEEEEEcCCCCcEEEEEEEeCCCCcceEEEECCCCeEEECCCCCCCc-CEEEEEEEcCCCEEEEC
Confidence            6899998  6899999999999999999999999887 78999999999999987543  44 99999999999999999


Q ss_pred             cccCCCCCCCcEEec
Q 025193          239 NVVPANWKFGQTFEG  253 (256)
Q Consensus       239 ~vipa~w~~G~~y~~  253 (256)
                      ||||++|++|.+|++
T Consensus        81 nViP~~W~~G~tY~s   95 (95)
T d1n10a1          81 DVIPEGWKADTSYES   95 (95)
T ss_dssp             EEECSSCCSSEEEEC
T ss_pred             ceECCCCCCCCEEeC
Confidence            999999999999996

>d1whoa_ b.7.3.1 (A:) PHL P 2 {Timothy grass (Phleum pratense) [TaxId: 15957]}

class: All beta proteins
fold: C2 domain-like
superfamily: PHL pollen allergen
family: PHL pollen allergen
domain: PHL P 2
species: Timothy grass (Phleum pratense) [TaxId: 15957]

Probab=99.93  E-value=5.1e-26  Score=172.21  Aligned_cols=87  Identities=25%  Similarity=0.470  Sum_probs=79.4

Q ss_pred             ceeEEEc--CCccceEEEEEeecCCcceEEEEEEccC-CceeecccCCCceEEeCCC--CCCcceEEEEEecCCcEEEEc
Q 025193          164 GIRFTIN--GHSYFNLVLITNVGGAGDVKAVFIKGSK-TGWQAMSRNWGQNWQSNSY--LDGQSLSFKVTTSDGRTITSY  238 (256)
Q Consensus       164 ni~~~v~--ss~~w~av~v~n~~g~~~I~sVeI~~~g-~~W~~m~r~~g~~W~~~~~--~~g~p~~vRvTs~~G~~v~~~  238 (256)
                      .|+|+|+  ||+|||+|++.|++|  +|.+|||+..+ ++|++|+|.||++|+++.+  +.+ ||+||||+.+|++++++
T Consensus         3 ~v~f~v~~GSnp~~lav~v~~~gg--~i~~vev~~~gs~~W~~M~r~wGa~W~~~~~~~~~g-plsfRvt~~~G~~~v~~   79 (94)
T d1whoa_           3 KVTFTVEKGSNEKHLAVLVKYEGD--TMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQG-PFNFRFLTEKGMKNVFD   79 (94)
T ss_dssp             SEEEEECTTCBTTEEEEEEEETTC--CEEEEEEECTTCCCCEECEECSTTEEEEECSSCCCS-SEEEEEEETTSCEEEEE
T ss_pred             cEEEEECCCCCccEEEEEEEEcCC--CEEEEEEEECCCCceeECccCcCccEEECCCCCCCc-cEEEEEEEcCCCEEEEc
Confidence            6999998  689999999999986  89999999877 6899999999999988653  454 99999999999999999


Q ss_pred             cccCCCCCCCcEEec
Q 025193          239 NVVPANWKFGQTFEG  253 (256)
Q Consensus       239 ~vipa~w~~G~~y~~  253 (256)
                      ||||++|++|++|++
T Consensus        80 nViP~~W~~G~ty~~   94 (94)
T d1whoa_          80 DVVPEKYTIGATYAP   94 (94)
T ss_dssp             EEECSSCCTTCEECC
T ss_pred             ceECCCCCCCCEECc
Confidence            999999999999985

>d1bw3a_ b.52.1.2 (A:) Barwin {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Barwin
domain: Barwin
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=98.74  E-value=4.5e-09  Score=79.41  Aligned_cols=61  Identities=25%  Similarity=0.511  Sum_probs=51.0

Q ss_pred             CCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeC-hHHHHHhhh----hcCCeeeEE
Q 025193           79 NGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLA-QPSFLHIAQ----YRAGIVPVL  153 (256)
Q Consensus        79 ~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS-~~AF~~la~----~~~G~v~i~  153 (256)
                      .-..||+|++|+.+.+     +.+++++|+|+|..                +.|||. +..|++|-.    ...|.+.|.
T Consensus        59 gq~sCGkclrvTN~at-----ga~~~~RiVDqCsn----------------gGlDLD~~~vFn~iDtdG~G~~~Ghl~V~  117 (125)
T d1bw3a_          59 GQAACGKCLRVTNPAT-----GAQITARIVDQCAN----------------GGLDLDWDTVFTKIDTNGIGYQQGHLNVN  117 (125)
T ss_dssp             SGGGTTCEEEEEETTT-----TEEEEEEEEECCSS----------------SSCCSCSSSSHHHHCSSCHHHHHSEEEEE
T ss_pred             CcccccceEEeeeccc-----CcEEEEEEeecccC----------------CCCccccHhhhheecCCCcccccccEEEE
Confidence            3467999999998763     45999999999754                779999 789999942    467999999


Q ss_pred             EEEeecc
Q 025193          154 FRRVPCV  160 (256)
Q Consensus       154 wr~V~C~  160 (256)
                      |++|.|.
T Consensus       118 y~fV~C~  124 (125)
T d1bw3a_         118 YQFVDCR  124 (125)
T ss_dssp             EEEECCC
T ss_pred             EEEecCC
Confidence            9999995

>d2enga_ b.52.1.1 (A:) Endoglucanase V (Eng V) {Humicola insolens [TaxId: 34413]}

class: All beta proteins
fold: Double psi beta-barrel
superfamily: Barwin-like endoglucanases
family: Eng V-like
domain: Endoglucanase V (Eng V)
species: Humicola insolens [TaxId: 34413]

Probab=90.56  E-value=0.074  Score=43.14  Aligned_cols=53  Identities=32%  Similarity=0.362  Sum_probs=33.9

Q ss_pred             EEEechhccCCCCCCCceEEEEEcCCCCCcCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCeeeCh
Q 025193           69 TAALSTALFNNGLSCGACYEIRCANDPQWCLPGTITVTATNFCPPNYALSNDNGGWCNPPLQHFDLAQ  136 (256)
Q Consensus        69 ~aA~s~~~~~~g~~CG~C~eV~c~~~p~~C~~~sv~v~V~D~Cp~~~~~~~~~~~~C~~~~~~~DLS~  136 (256)
                      +||++-.-...+..|.+|||++=++.+  -.+++.+|+||+.=-+          .   ..+||||.-
T Consensus        72 fAA~~~~g~~e~~~Cc~Cy~LtFTs~~--~~GKkMiVQ~tNTGgD----------l---g~n~FDl~i  124 (210)
T d2enga_          72 FAATSIAGSNEAGWCCACYELTFTSGP--VAGKKMVVQSTSTGGD----------L---GSNHFDLNI  124 (210)
T ss_dssp             EEEEECTTCCHHHHTTCEEEEEECSGG--GTTCEEEEEEEEC------------------CCEEEEEC
T ss_pred             eeeeeecCCCccccccccEEEEeecCC--cCCCEEEEEEeccCCc----------c---CCCeeeEec
Confidence            566654333334569999999987643  1255999999996322          1   258999964