Citrus Sinensis ID: 025194

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
Protein Sequence
MLSFESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHcHHHHHHccccccHHHcccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHcHHHccccHHHHHHHccHEEccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHcccccHHHccc
Coil and Loop (DISEMBL)
MLSFESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVcaqrresdprpsfdltpAQEECLQRLQLRIdvaydssiPEHREALRALWNAAFPDEELRDLISEQWKemgwqgkdpstdfrgggfiSLENLLYLARNFPKSFQDLLRkqegdrsvweypfavagVNITFMLIQMLdleavkprtMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVtrledlpsysllsr
Flexible Loop (DISEMBL)
MLSFESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDprpsfdltpAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREllledvtrledlpsysllsr
Low Complexity Region (SEG)
MLsfesfffmfseIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTrrqlerellleDVTRLEDLPSYSLLSR
Disordered region (IsUnstruct)
***FESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVCAQ*****************ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDV**************
Disordered Region (DISOPRED)
*******FFMFSEIQICCAEVVAGSAAWLGRGLSC**************DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF*************KEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISEMBL)
MLSFESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVCAQR********FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISPRO)
*LSFESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSFESFFFMFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	256	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.730	0.191	0.313	3e-25
Q54RS7	618	ELMO domain-containing pr	no	no	0.687	0.284	0.338	2e-23
Q54UP9	1267	Ankyrin repeat and ELMO d	no	no	0.625	0.126	0.306	5e-19
Q54VR8	284	ELMO domain-containing pr	no	no	0.566	0.510	0.331	1e-18
Q8IZ81	293	ELMO domain-containing pr	yes	no	0.535	0.467	0.335	2e-17
Q08DZ3	293	ELMO domain-containing pr	yes	no	0.773	0.675	0.299	3e-17
Q499U2	720	Engulfment and cell motil	yes	no	0.703	0.25	0.276	4e-16
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.414	0.361	0.370	5e-16
A6QR40	652	Engulfment and cell motil	no	no	0.691	0.271	0.270	9e-16
Q96BJ8	720	Engulfment and cell motil	no	no	0.703	0.25	0.266	1e-15

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  115 bits (289), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 27/214 (12%)

Query: 55  QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 114
           Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 115 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML---IQML 171
           DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L   I  +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480

Query: 172 DLEAVKPRTMVGAT---------------FLKFLSENESAFDLLYCITFKLMDHQWLAMR 216
               + P     +                F      +  AF+ +YC TF+++D  W  M 
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540

Query: 217 ASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 250
            +YM F  +M S +  +        +T LE  P+
Sbjct: 541 GTYMHFQKIMSSVKNLI--------ITALESKPT 566

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score =  109 bits (272), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 16/192 (8%)

Query: 51  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 110
           +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 111 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FML 167
           DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+   F +
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query: 168 IQMLDLEAVKPRTMVG------ATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 221
            Q+ +    +P           A        N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct: 470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query: 222 FNTVMKSTRRQL 233
           F  V+K  + QL
Sbjct: 530 FPLVIKKLKSQL 541

Dictyostelium discoideum (taxid: 44689)

>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1

 Score = 94.7 bits (234), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 16/176 (9%)

Query: 59  LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 118
           +Q L +     Y+   P H+  L  LW+  FP++  +    E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348

Query: 119 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKP 178
            G   L++L+YLA+N    F + L  ++ + +   YP+A +G+ +T  L+     E VKP
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLV-----ECVKP 401

Query: 179 -------RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 227
                    ++G  +   L E+E+A + +YC+  ++    W    A+YM F  V +
Sbjct: 402 INISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 21/166 (12%)

Query: 68  VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 127
           + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query: 128 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMV----- 182
           +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D    KP   +     
Sbjct: 176 IYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID----KPHFKIYFFKN 228

Query: 183 GATFLKFLSENESAFDLLYCITFKLMDHQWLAMR-ASYMDFNTVMK 227
           G+T  +F   NE     LY + F   D  + + +  S M+FNT+ K
Sbjct: 229 GSTLTQF---NE-----LYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

Dictyostelium discoideum (taxid: 44689)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 39  QRRESDPRPSFDLTPAQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAA 88
           + +  +P          + CL ++    QL +DV       YDS   +H E L  LWN  
Sbjct: 79  KEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLL 138

Query: 89  FPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGD 148
            P ++L   IS+QW E+G+QG DP TDFRG G + L NL+Y + N+      +L +   +
Sbjct: 139 MPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSR--SN 196

Query: 149 RSVWEYPFAVAGVNITFMLIQMLDLEAVK 177
                Y +A+ G+N+T M   +L  EA+K
Sbjct: 197 HPKLGYSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 19/217 (8%)

Query: 35  CVCAQRRESDPRPSFD--LTPAQEECLQRL----QLRIDV------AYDSSIPEHREALR 82
           CV    +E +  P  D       + CL ++    QL +DV       YDS   +H + L 
Sbjct: 73  CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132

Query: 83  ALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL 142
            LWN   P ++L+  IS+QW ++G+QG DP TDFRG G + L NL+Y + N+      +L
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192

Query: 143 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYC 202
            +    +    Y +A+ G+N+T M   +L  EA+K        F+  +   E  F   YC
Sbjct: 193 SRSNHPK--LGYSYAIVGINLTEMAYSLLKSEALKFHLY---NFVPGIPTMEH-FHQFYC 246

Query: 203 ITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELL 238
                 D  W   +  S M FN   +    +++  LL
Sbjct: 247 YLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLL 283

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 15/195 (7%)

Query: 62  LQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLISEQWKEMGWQGK 110
           L+ R+    D    E RE L+AL  AAF PD E           R L   +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNS 352

Query: 111 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 168
            P+ D      G ++L+N+LY +R+ P ++   + +        E PFA + + +T +L 
Sbjct: 353 SPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 169 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 228
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLHVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 229 TRRQLERELLLEDVT 243
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Rattus norvegicus (taxid: 10116)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 70  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 129
           YDS+  +H + L  LW+   P ++L   IS+QW ++G+QG DP TDFRG G + L NL+Y
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 130 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVK 177
            + N+      +L +    +    Y +A+ G+N+T M   +L  EA+K
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 62  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 110
           L+ R+    D    E RE L+AL  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 111 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 168
           +P+ D      G ++L+N+LY +R  P ++   + +        E PFA + + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 169 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 228
            +L +   +P +     F       + +F  L+C++ +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 DLLHVG--EPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 229 TRRQLERELLLE 240
            R QL R L L+
Sbjct: 471 VREQLARTLALK 482

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3 PE=2 SV=3

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 62  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 110
           L+ R+    D    E RE L+ L  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 111 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 168
           +P+ D      G ++L+N+LY +RN P ++   + +        E PFA   + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLC 412

Query: 169 QMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKS 228
           ++L +   +P +     F       + +F  L+C+  +L++  W  MRA+  DF+ VM+ 
Sbjct: 413 ELLRVG--EPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDFDKVMQV 470

Query: 229 TRRQLERELLLEDVT 243
            R QL R L L+  +
Sbjct: 471 VREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
297734628	287	unnamed protein product [Vitis vinifera]	0.968	0.864	0.903	1e-130
255571033	267	ELMO domain-containing protein, putative	0.929	0.891	0.915	1e-125
225453354	267	PREDICTED: ELMO domain-containing protei	0.929	0.891	0.911	1e-125
449445499	267	PREDICTED: ELMO domain-containing protei	0.929	0.891	0.886	1e-123
224137120	267	predicted protein [Populus trichocarpa]	0.929	0.891	0.886	1e-122
356568581	266	PREDICTED: ELMO domain-containing protei	0.929	0.894	0.878	1e-122
356531822	266	PREDICTED: ELMO domain-containing protei	0.929	0.894	0.873	1e-122
224063629	267	predicted protein [Populus trichocarpa]	0.929	0.891	0.878	1e-121
356520762	247	PREDICTED: ELMO domain-containing protei	0.964	1.0	0.842	1e-120
388507082	247	unknown [Lotus japonicus]	0.964	1.0	0.838	1e-120

>gi|297734628|emb|CBI16679.3| unnamed protein product [Vitis vinifera]

 Score =  469 bits (1206), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/248 (90%), Positives = 239/248 (96%)

Query: 9   FMFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDV 68
           FMF++IQIC AEVVAGSAAWLGRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RI+V
Sbjct: 40  FMFTDIQICLAEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIEV 99

Query: 69  AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 128
           +YDSSI EH+EALRALWNA+FP+EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL
Sbjct: 100 SYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 159

Query: 129 YLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLK 188
           + ARN+PKSFQDLLRKQEGDR++WEYPFAVAGVNITFMLIQMLDLEAVKPR+M GA FLK
Sbjct: 160 FFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQMLDLEAVKPRSMAGAIFLK 219

Query: 189 FLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDL 248
           FLSENESAFDLLYCITFKLMD+QWLAM ASYMDFNTVMKSTR QLERELLLEDV+RLEDL
Sbjct: 220 FLSENESAFDLLYCITFKLMDNQWLAMHASYMDFNTVMKSTRCQLERELLLEDVSRLEDL 279

Query: 249 PSYSLLSR 256
           PSYSLL+R
Sbjct: 280 PSYSLLTR 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571033|ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223534142|gb|EEF35858.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/238 (91%), Positives = 227/238 (95%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AEVVAGSAAWLGRGLSCVCAQRRESD RPSFDLT  QEECLQRLQ RIDVAYDSSIPEH+
Sbjct: 30  AEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTLTQEECLQRLQSRIDVAYDSSIPEHQ 89

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           EALRALWNAAFP+EELR LISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ A+NFP SF
Sbjct: 90  EALRALWNAAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPTSF 149

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLL+K+EGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGA FLKFL+ENESAFD
Sbjct: 150 QDLLQKREGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGAVFLKFLTENESAFD 209

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
           LLYCITFKLMDHQWL M ASYMDFNTVMKSTRRQLERELLLED+TRLEDLPSY LL+R
Sbjct: 210 LLYCITFKLMDHQWLNMHASYMDFNTVMKSTRRQLERELLLEDITRLEDLPSYGLLTR 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453354|ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/238 (91%), Positives = 230/238 (96%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AEVVAGSAAWLGRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RI+V+YDSSI EH+
Sbjct: 30  AEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQ 89

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           EALRALWNA+FP+EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARN+PKSF
Sbjct: 90  EALRALWNASFPEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNYPKSF 149

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLLRKQEGDR++WEYPFAVAGVNITFMLIQMLDLEAVKPR+M GA FLKFLSENESAFD
Sbjct: 150 QDLLRKQEGDRALWEYPFAVAGVNITFMLIQMLDLEAVKPRSMAGAIFLKFLSENESAFD 209

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
           LLYCITFKLMD+QWLAM ASYMDFNTVMKSTR QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 210 LLYCITFKLMDNQWLAMHASYMDFNTVMKSTRCQLERELLLEDVSRLEDLPSYSLLTR 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445499|ref|XP_004140510.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/238 (88%), Positives = 228/238 (95%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AEVVAGSAAWLGRGLSCVCAQRRESD RPSFDLTPAQEECL RLQ RID+AYDSSI EH+
Sbjct: 30  AEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLLRLQNRIDIAYDSSITEHQ 89

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           EALR LWN AFP+EELR LISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ A+NFPKSF
Sbjct: 90  EALRTLWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSF 149

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLLRKQEGDRS+WEYPFAVAGVNITFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFD
Sbjct: 150 QDLLRKQEGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFD 209

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
           LLYCITFKLMDH+WLAM ASYMDFNTVMK+TRRQLE+ELL+ED++RLE+LPSY LL+R
Sbjct: 210 LLYCITFKLMDHEWLAMHASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137120|ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|222835343|gb|EEE73778.1| predicted protein [Populus trichocarpa]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/238 (88%), Positives = 226/238 (94%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AEVVAGSAAWLGRGLSCVCAQRRESD RPSFDLTP QEECLQRLQ RIDVAYDSS+PEH+
Sbjct: 30  AEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPPQEECLQRLQSRIDVAYDSSVPEHQ 89

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           EAL+ALWNAAFP+EEL  LISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARNFP SF
Sbjct: 90  EALKALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPTSF 149

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLL+K+EGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRT+VGATFLKFL E++SAFD
Sbjct: 150 QDLLQKREGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLEEDDSAFD 209

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
            LYCITFKLMDH+WL MRASYMDFN VMKSTRRQLERELL ED+TRLE+LPSY+LL+R
Sbjct: 210 RLYCITFKLMDHEWLDMRASYMDFNAVMKSTRRQLERELLSEDITRLEELPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568581|ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/238 (87%), Positives = 224/238 (94%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AE V GS AWLGRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RID+ YD SIPEH+
Sbjct: 29  AEFVTGSTAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQNRIDIPYDGSIPEHQ 88

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           +ALRALW+AAFP+EEL  LISEQWK MGWQGKDPSTDFRGGGFISLENLL+ ARNFPKSF
Sbjct: 89  DALRALWSAAFPEEELHGLISEQWKNMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSF 148

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFD
Sbjct: 149 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFD 208

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
           LLYCITFK+MD QWL+MRASYMDFNTVMKSTRRQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 209 LLYCITFKMMDQQWLSMRASYMDFNTVMKSTRRQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531822|ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  442 bits (1136), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/238 (87%), Positives = 224/238 (94%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AE V GS AWLGRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RID+ YD S+PEH+
Sbjct: 29  AEFVTGSTAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIDIPYDGSVPEHQ 88

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           +ALR LWNAAFP+EEL  LISEQWK+MGWQGKDPSTDFRGGGFISLENLL+ ARNFPKSF
Sbjct: 89  DALRDLWNAAFPEEELHGLISEQWKDMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSF 148

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFD
Sbjct: 149 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFD 208

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
           LLYCITFK+MD QWL+MRASYMDFNTVMKSTRRQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 209 LLYCITFKMMDQQWLSMRASYMDFNTVMKSTRRQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063629|ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|222842962|gb|EEE80509.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/238 (87%), Positives = 224/238 (94%)

Query: 19  AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
           AE VAGSAAWLGRGLSCVCAQRRESD RPSFDLTP QEECLQRLQ RIDV YDSS+ +H+
Sbjct: 30  AEAVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPVQEECLQRLQSRIDVPYDSSVLDHQ 89

Query: 79  EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
           EAL+ LWNAAFP+EEL  LISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARNFPKSF
Sbjct: 90  EALKTLWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSF 149

Query: 139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
           QDLL+K+EGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR +VGATFLKFL+EN+SAFD
Sbjct: 150 QDLLQKREGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRALVGATFLKFLAENDSAFD 209

Query: 199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 256
           LLYCITFKLMDH+WL MRASYMDFN VMKSTRRQLERELL ED+TRLEDLPSY+LL+R
Sbjct: 210 LLYCITFKLMDHEWLTMRASYMDFNAVMKSTRRQLERELLSEDITRLEDLPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520762|ref|XP_003529029.1| PREDICTED: ELMO domain-containing protein A-like isoform 2 [Glycine max]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/247 (84%), Positives = 224/247 (90%)

Query: 10  MFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVA 69
           MF+ I  C AEVV GSAAWLGRGLSCVC QRR+SD   +FDLT AQEECLQR+Q RIDV 
Sbjct: 1   MFAAILNCIAEVVVGSAAWLGRGLSCVCVQRRDSDASNTFDLTLAQEECLQRIQRRIDVP 60

Query: 70  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 129
           YDSSI EH++ALRALWNAAFP+EEL  LISEQWKEMGWQGKDPSTDFRGGGFISLEN L+
Sbjct: 61  YDSSIIEHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLF 120

Query: 130 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF 189
            ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT+MLIQMLDLEAVKPR +VGATFLKF
Sbjct: 121 FARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITYMLIQMLDLEAVKPRNLVGATFLKF 180

Query: 190 LSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP 249
           L+ENESAFDLLYCITFKLMDHQWL+M ASYMDFN VMK TRRQLE+ELL+ED+ +LEDLP
Sbjct: 181 LAENESAFDLLYCITFKLMDHQWLSMHASYMDFNAVMKETRRQLEKELLVEDIAQLEDLP 240

Query: 250 SYSLLSR 256
           SY LLSR
Sbjct: 241 SYKLLSR 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507082|gb|AFK41607.1| unknown [Lotus japonicus]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 207/247 (83%), Positives = 225/247 (91%)

Query: 10  MFSEIQICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVA 69
           MF+EI  C +E VAGSAAWLG+GLSCVC QRR+SD   SFDLT AQEE LQRLQ RIDV 
Sbjct: 1   MFAEIHTCISEAVAGSAAWLGKGLSCVCVQRRDSDASSSFDLTLAQEESLQRLQKRIDVP 60

Query: 70  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 129
           YDSSI +H++ALRALWNAAFP+EEL  LISEQWKEMGWQGKDPSTDFRGGGFISLEN L+
Sbjct: 61  YDSSIVQHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLF 120

Query: 130 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF 189
            +RNFPKSFQDLL KQEGDRSVWEYPFAVAGVNITFMLIQMLDLE+VKP T+VGATF+K 
Sbjct: 121 FSRNFPKSFQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQMLDLESVKPHTLVGATFVKL 180

Query: 190 LSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP 249
           L+ENESAFDLLYCI FKLMDHQWL+MRASYMDFNTVMKSTRRQLE+ELLLED+T+LEDLP
Sbjct: 181 LAENESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTRRQLEKELLLEDITQLEDLP 240

Query: 250 SYSLLSR 256
           SY LLSR
Sbjct: 241 SYKLLSR 247

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	0.929	0.894	0.806	7.7e-103
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	0.929	0.894	0.806	8.8e-102
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.910	0.829	0.581	2.9e-71
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.921	0.890	0.541	3.6e-66
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.917	0.727	0.542	9.7e-64
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.585	0.704	0.602	1.3e-45
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.437	0.114	0.407	4.4e-24
DICTYBASE|DDB_G0282949	618	elmoC "engulfment and cell mot	0.664	0.275	0.338	1.1e-22
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.585	0.528	0.335	4.4e-20
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.628	0.509	0.325	1.4e-18

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
 Identities = 192/238 (80%), Positives = 208/238 (87%)

Query:    19 AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
             AEVVAGSAAWLGRGLSCVC Q R+ DPRPSFDLTPAQEECLQRLQ RIDVAYDSSIP+H+
Sbjct:    29 AEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYDSSIPQHQ 88

Query:    79 EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
             EAL+ LW  AFP+EEL  ++S+QWKEMGWQGKDPSTDFRGGGFISLENLLY AR FPKSF
Sbjct:    89 EALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFARKFPKSF 148

Query:   139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
               LLRKQ GDRSVWEYPFAVAG+NITFMLIQMLDLEAVKPR++VG TFL+FLS NESAFD
Sbjct:   149 HGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLSVNESAFD 208

Query:   199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLSR 256
             LLYCI FKLMD QWL+MRASYM+FNTVMKST           D+T LEDLPSYSLLS+
Sbjct:   209 LLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLEDLPSYSLLSQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
 Identities = 192/238 (80%), Positives = 207/238 (86%)

Query:    19 AEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHR 78
             AE V GSAAWLGRGLSCVCAQRR+SD   +FDLTPAQEECLQ LQ RIDVAYDS+IP H+
Sbjct:    29 AEAVPGSAAWLGRGLSCVCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYDSTIPLHQ 88

Query:    79 EALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSF 138
             EALR LW  +FP+EEL  LISEQWKEMGWQGKDPSTDFRGGGFISLENLLY ARNF KSF
Sbjct:    89 EALRELWKLSFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFQKSF 148

Query:   139 QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFD 198
             QDLLRKQ GDRSVWEYPFAVAG+N+TFMLIQMLDLEAVKPRT+VGATFLKFLSENESAFD
Sbjct:   149 QDLLRKQVGDRSVWEYPFAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLSENESAFD 208

Query:   199 LLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLSR 256
             LLYCI FKLMD QWL+MRASYM+FNTVMKST           D+  LEDLPSY+LL++
Sbjct:   209 LLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLERELMLEDIMHLEDLPSYALLNQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 136/234 (58%), Positives = 175/234 (74%)

Query:    23 AGSAAW-LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREAL 81
             + + +W + + L+CVC  R+ +  R   +LTP QEE L+RL+ R+   YD+S P+H++AL
Sbjct:    48 SSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRPDHQDAL 107

Query:    82 RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDL 141
             RALW+A +PDE+L+DLIS+QWK MGWQGKDPSTDFRG GFISLENLL+ A+ F  SFQ L
Sbjct:   108 RALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRL 167

Query:   142 LRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLY 201
             L KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LSE+E AFDLLY
Sbjct:   168 LNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFDLLY 227

Query:   202 CITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLS 255
             C+ F +MD QWL   A+YM+FN V++ T           DV R+ED+PS+SLLS
Sbjct:   228 CVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLLS 281

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 130/240 (54%), Positives = 170/240 (70%)

Query:    16 ICCAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIP 75
             +  A  + G+ +W+G GL       R  D    + L+P QEE LQRLQ R+ V +D + P
Sbjct:    27 VVTATGMVGTRSWIG-GL--FTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRP 83

Query:    76 EHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFP 135
             +H+E+L+ALWN AFP+  L  L++EQWKEMGWQG +PSTDFRG GFI+LENLL+ AR +P
Sbjct:    84 DHQESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYP 143

Query:   136 KSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEA-VKPRTMVGATFLKFLSENE 194
               F+ LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+   KP+ + G  FLK L E+E
Sbjct:   144 VCFRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDE 203

Query:   195 SAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 254
              AFD+LYCI F +MD QWLAM ASYM+FN V+++T           D+ R++DLP+Y+LL
Sbjct:   204 RAFDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 129/238 (54%), Positives = 168/238 (70%)

Query:    19 AEVVAGSAAWLGRGLSCVCAQRRESDPR--PSFDLTPAQEECLQRLQLRIDVAYDSSIPE 76
             A++V GS + +GR LS     +  +  R  P   L+  QEE L+ ++ RI++ +D S  E
Sbjct:    85 AKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKRRIEIPFDGSRME 143

Query:    77 HREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPK 136
             H++ALR LW  A+P  EL  L SE WKEMGWQG DPSTDFRGGG+ISLENL++ A+ +P+
Sbjct:   144 HQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPE 203

Query:   137 SFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESA 196
             SFQ LL KQ+G R+ WEYPFAVAG+NI+FML QMLDL++ KP T+ G  FL FL E+E A
Sbjct:   204 SFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMA 263

Query:   197 FDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLL 254
             FD LYCI F++MD QWLA RASYM+FN V+KST           DV+ + DLP+++LL
Sbjct:   264 FDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAFNLL 321

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 94/156 (60%), Positives = 116/156 (74%)

Query:    72 SSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLA 131
             SS P  R  ++    + + DE+L+DLIS+QWK MGWQ KDPSTDFRG GFISLENL    
Sbjct:    58 SSTPSWR--IKKSLTSTYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENL---- 111

Query:   132 RNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLS 191
             R F K+F  LL+KQ G R+ WEYPFAVAGVNITFM++QMLDLEA KPR+ +   FL+ LS
Sbjct:   112 RFFAKTFSRLLKKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLS 171

Query:   192 ENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 227
             E+E AF LLYC+ F +MD QWL   A+YM+FN V++
Sbjct:   172 ESEWAFGLLYCVAFVVMDKQWLDKNATYMEFNDVLR 207

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 229 (85.7 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 46/113 (40%), Positives = 66/113 (58%)

Query:    55 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 114
             Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   115 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML 167
             DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFEL 473

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0282949 elmoC "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 271 (100.5 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 63/186 (33%), Positives = 107/186 (57%)

Query:    51 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 110
             +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct:   357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query:   111 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FML 167
             DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+   F +
Sbjct:   416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query:   168 IQMLDLEAVKP--RTMVGATFLKFLSE----NESAFDLLYCITFKLMDHQWLAMRASYMD 221
              Q+ +    +P   +   ++++  L      N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct:   470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query:   222 FNTVMK 227
             F  V+K
Sbjct:   530 FPLVIK 535

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 54/161 (33%), Positives = 89/161 (55%)

Query:    68 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 127
             + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct:   116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query:   128 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFL 187
             +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D    KP   +   F 
Sbjct:   176 IYFSTQHSEDAREILKNSN---SKCCYPFAITGINITALVLNLID----KPHFKI--YFF 226

Query:   188 KFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMK 227
             K  S   + F+ LY + F   D  + + +  S M+FNT+ K
Sbjct:   227 KNGS-TLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 55/169 (32%), Positives = 83/169 (49%)

Query:    63 QLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFI 122
             QLR +  YDS   +H + L  LW    PD  L   +++QW+++G+QG DP TDFRG G +
Sbjct:   128 QLRAE-KYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTDFRGMGML 186

Query:   123 SLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR--T 180
              LENLLY A  +  + + +L           Y +A+ G+N+T M   ++   A K     
Sbjct:   187 GLENLLYFATAYNDAAKHVLLHSM--HPTLGYTYAIVGINLTSMAFNLVKTGAAKTHFYN 244

Query:   181 MVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKS 228
             +V      F +  +  F  LYC  F   D  W+     + MDF  + +S
Sbjct:   245 LVVQHRQDFSTVED--FHKLYCYLFFEFDRFWMESDPRNIMDFREIYQS 291

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019062001 SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (267 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	256
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	4e-68

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  207 bits (529), Expect = 4e-68
 Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 57  ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDF 116
             L  L+      +D   PEHR  L+ LW A FPDE L   +SE+WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 117 RGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAV 176
           RG G + L NLLY A N+P  FQ LL +     +  EYPFAVA +N+T ML ++L +  +
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 177 KPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 227
                    F         AF+ LYC  F L D  W  MRA+ MDFN V++
Sbjct: 121 DQEDYKNYGF-PLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	256
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	100.0

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=7.4e-66  Score=460.88  Aligned_cols=233  Identities=53%  Similarity=0.874  Sum_probs=220.1

Q ss_pred             hhhheeecccccccc-----ccccccccccCCCCCCCCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCC
Q 025194           17 CCAEVVAGSAAWLGR-----GLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPD   91 (256)
Q Consensus        17 ~~~~~~~~~~~~~~~-----~~~c~~~~~~~~~~~~~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~   91 (256)
                      ++.+...|+.+|+|+     ++-|.|...+..+...|..+.+.|+++++.+++++++|||.+|++|+++|++||+.++|+
T Consensus        64 ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~~~~~~yDs~n~~H~e~L~~lwk~~~p~  143 (302)
T KOG2998|consen   64 ASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEELRQEPYDSDNPDHEELLLDLWKLLYPD  143 (302)
T ss_pred             cccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHhCCC
Confidence            678999999999999     999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccchhhhHhHhcCCCCCCCCCCCcchhhHHhhHHHHHhhCcHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHh
Q 025194           92 EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQML  171 (256)
Q Consensus        92 ~~~~~~~s~~Wk~lGFQg~dP~TDFRg~G~LgL~~LlyF~~~~~~~~~~il~~q~~~~~~~~yPfAva~INiT~~L~~~L  171 (256)
                      +++++++|++|++|||||+||+|||||+|+|||+||+|||++||+.+++++.+|.  ++.|+|||||||||||+|++++|
T Consensus       144 ~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~s~--~~r~eYpfAVvgINIT~m~~qmL  221 (302)
T KOG2998|consen  144 KELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLKSR--HPRWEYPFAVVGINITFMAIQML  221 (302)
T ss_pred             CccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHhcC--CCccCCceEEEeecHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999974  56699999999999999999999


Q ss_pred             hhccCCC-ccccccceeeccccchhhHHHHHHHHHHHHHHHHHhCCCChhcHHHHHHHHHHHHHHHhcccccccccCCCc
Q 025194          172 DLEAVKP-RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS  250 (256)
Q Consensus       172 ~~~~~~~-~~~~~~~f~~ll~~~~~aF~eLy~~~F~~f~~~W~~~~at~mdF~~Vl~~~r~ql~~~L~~~~~~~i~~~~~  250 (256)
                      +.++.+. .++....|     +++.+|+.|||++|..||++|+++++||||||.|++++|.|++++|++.|+..+.|+|+
T Consensus       222 ~~eal~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~simefn~Vlk~~~~qler~L~~~d~~~~~~lp~  296 (302)
T KOG2998|consen  222 DLEALKKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRATIMEFNTVLKSFRRQLERELSLDDVLLITDLPA  296 (302)
T ss_pred             Hhhhcccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhhhhhhhcccccchh
Confidence            9998844 33333333     78899999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccC
Q 025194          251 YSLLSR  256 (256)
Q Consensus       251 ~~~~~~  256 (256)
                      |++|.+
T Consensus       297 ~~~L~~  302 (302)
T KOG2998|consen  297 FNLLLQ  302 (302)
T ss_pred             hhhhcC
Confidence            999964

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=2.6e-50  Score=340.61  Aligned_cols=168  Identities=43%  Similarity=0.767  Sum_probs=152.6

Q ss_pred             HHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCcccccchhhhHhHhcCCCCCCCCCCCcchhhHHhhHHHHHhhCcHH
Q 025194           58 CLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS  137 (256)
Q Consensus        58 ~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~s~~Wk~lGFQg~dP~TDFRg~G~LgL~~LlyF~~~~~~~  137 (256)
                      .|+.|++++++|||++|++|+++|++||++++|+.+.+++.+++|+++||||+||+|||||+|+|||+||+||+++||+.
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            57889999999999999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCCccccccceeec-cccchhhHHHHHHHHHHHHHHHHHhCC
Q 025194          138 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKF-LSENESAFDLLYCITFKLMDHQWLAMR  216 (256)
Q Consensus       138 ~~~il~~q~~~~~~~~yPfAva~INiT~~L~~~L~~~~~~~~~~~~~~f~~l-l~~~~~aF~eLy~~~F~~f~~~W~~~~  216 (256)
                      +++|+.+|.++.+.++||||+||||||.+|+++|+++...+....  .+... +.+.+.+|++|||++|..|+++|++++
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~  159 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDSEFYK--RINFLSFFSSLEAFEELFCACFQLFDRTWKEMN  159 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCHHHhh--cccccccCccHHHHHHHHHHHHHHHHHHHccCC
Confidence            999999998776678999999999999999999999766443332  22222 567788999999999999999999999


Q ss_pred             CChhcHHHHHH
Q 025194          217 ASYMDFNTVMK  227 (256)
Q Consensus       217 at~mdF~~Vl~  227 (256)
                      +|+|||++|+|
T Consensus       160 at~~dF~~V~~  170 (170)
T PF04727_consen  160 ATIMDFNKVLK  170 (170)
T ss_pred             CCHHHHHhhcC
Confidence            99999999975

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-33  Score=265.48  Aligned_cols=200  Identities=27%  Similarity=0.496  Sum_probs=183.3

Q ss_pred             CCCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHhCCCccc-----------ccchhhhHhHhcCCC-CCCCC
Q 025194           47 PSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEEL-----------RDLISEQWKEMGWQG-KDPST  114 (256)
Q Consensus        47 ~~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~s~~Wk~lGFQg-~dP~T  114 (256)
                      ..++|+.+|...+..+..|+.++.|+.+....+.++++-..+|.++.-           .....+..|++||-. .||+.
T Consensus       274 ~~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~  353 (713)
T KOG2999|consen  274 RPIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQ  353 (713)
T ss_pred             chHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHH
Confidence            346899999999999999999999999999999999999999877432           235678999999999 99999


Q ss_pred             CCC--cchhhHHhhHHHHHhhCcHHHHHHHHhhcCCCCCCCccHHHHHHHHHHHHHHHhhhccCCCccccccceeecccc
Q 025194          115 DFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSE  192 (256)
Q Consensus       115 DFR--g~G~LgL~~LlyF~~~~~~~~~~il~~q~~~~~~~~yPfAva~INiT~~L~~~L~~~~~~~~~~~~~~f~~ll~~  192 (256)
                      ||-  .+|+|+|+||+|||++||+.+.+++.+++++.++++|||+.++|.+|.|||++|+.+++  +......|.|++|.
T Consensus       354 df~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~--p~E~~~df~pmfFt  431 (713)
T KOG2999|consen  354 DFGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEP--PDELDRDFIPMFFT  431 (713)
T ss_pred             hcccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCC--chhhcCccceeeec
Confidence            996  99999999999999999999999999999999999999999999999999999999874  34444579999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhCCCChhcHHHHHHHHHHHHHHHhcccccccccCCC
Q 025194          193 NESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP  249 (256)
Q Consensus       193 ~~~aF~eLy~~~F~~f~~~W~~~~at~mdF~~Vl~~~r~ql~~~L~~~~~~~i~~~~  249 (256)
                      ++..|+++||+|.++|+++|++|+||-.||++|+.+||+||.|+|... +++++++-
T Consensus       432 hd~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~fk  487 (713)
T KOG2999|consen  432 HDTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQFK  487 (713)
T ss_pred             CCCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHHH
Confidence            999999999999999999999999999999999999999999999976 77777654

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	256
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 5e-06
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 55/254 (21%)

Query: 29  LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRAL---W 85
           L   +      R +        +   Q E L+RL              +   L  L    
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKS---------KPYENCLLVLLNVQ 254

Query: 86  NA----AFPDEELRDLISEQWKE-----MGWQGKDPSTDFRGGGFISLENLLYLARNFPK 136
           NA    AF +   + L++ ++K+             S D         E    L +    
Sbjct: 255 NAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 137 SFQDLLRKQEGDRSVWEYPFAVAGV-------NITFMLIQMLDLEAVKPRTMVGATFLKF 189
             QD L ++    +    P  ++ +         T+   + ++ + +    +   + L  
Sbjct: 314 RPQD-LPREVLTTN----PRRLSIIAESIRDGLATWDNWKHVNCDKLT-TII--ESSLNV 365

Query: 190 LSENE--SAFDLLYC------ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLED 241
           L   E    FD L        I   L+   W       +  + VM     +L +  L+E 
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-----FDVIKSDVMVVV-NKLHKYSLVE- 418

Query: 242 VTRLEDLPSYSLLS 255
             +     + S+ S
Sbjct: 419 --KQPKESTISIPS 430

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00