Citrus Sinensis ID: 025203

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
Protein Sequence
MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHcccccccHHHHccccccccHHHHccHHHHHHHHHcccEEEEEEccccccccccccccEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccHHHHccHHHHHHHccccccccHHHHHHHHHHccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccccccEEEEccccccccccEEccHHHHHHHHHcccEEEEEccccHHHccccccccEEEEcccccEEcc
Coil and Loop (DISEMBL)
MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVelnnirefevvPQECIDHIKKymtssqykadSQRAAEEVKLYLSGCcslagdgkdawifdvddtllstipyfkkhgfggerlnaSSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRiwgvvgdqwssfeglpkpkrtfklpnsmyyls
Flexible Loop (DISEMBL)
MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINvelnnirefevVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWgvvgdqwssfeglpkpkrtfklpnsmyyls
Low Complexity Region (SEG)
MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS
Disordered region (IsUnstruct)
*****VLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYK*****AAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL*****************
Disordered Region (DISOPRED)
***NSVLILAFTSLCIASALADW********************ESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED************RKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS
Disordered Region (DISEMBL)
MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMT*************EVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS
Disordered Region (DISPRO)
*ARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLExxxxxxxxxxxxxxxxxxxxxLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	256	2.2.26 [Sep-21-2011]
P27061	255	Acid phosphatase 1 OS=Sol	N/A	no	0.851	0.854	0.425	3e-50
P15490	254	Stem 28 kDa glycoprotein	no	no	0.964	0.972	0.345	4e-43
P10742	291	Stem 31 kDa glycoprotein	no	no	0.945	0.831	0.344	4e-41
P10743	254	Stem 31 kDa glycoprotein	no	no	0.906	0.913	0.351	3e-39
O82122	265	Vegetative storage protei	no	no	0.820	0.792	0.390	1e-38
O49195	270	Vegetative storage protei	no	no	0.820	0.777	0.390	4e-38
O04195	283	Uncharacterized protein A	no	no	0.722	0.653	0.241	2e-07
P26093	274	Lipoprotein E OS=Haemophi	yes	no	0.476	0.445	0.242	0.0004

>sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1

 Score =  198 bits (503), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/221 (42%), Positives = 137/221 (61%), Gaps = 3/221 (1%)

Query: 35  VKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLS 94
           ++D LK  C +WR  VE NN+  ++ +P+EC D++K+YM    YK +  R ++E   Y +
Sbjct: 37  LRDELK--CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEY-A 93

Query: 95  GCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLN 154
               L  DG+D WIFDVD+TLLS +PY+  H +G E  +   ++ W++   APAL  +L 
Sbjct: 94  KSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLK 153

Query: 155 LFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQV 214
           L+ E+   G K+FL++ R E  RS TV+NL++ G+H W  L LRG +D  K    YK++ 
Sbjct: 154 LYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSER 213

Query: 215 RKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
           R  +V+EG+RI G  GDQWS   G     R+FKLPN MYY+
Sbjct: 214 RNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYYI 254

Solanum lycopersicum (taxid: 4081)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2

>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1

 Score =  174 bits (442), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 144/252 (57%), Gaps = 5/252 (1%)

Query: 6   VLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQEC 65
           VL+    ++ +A     +++   R+       + +  C SWR+ VE +NI  FE +P+EC
Sbjct: 5   VLVFFVATILVAWQCHAYDMFPLRMNTGYGARTPEVKCASWRLAVEAHNIFGFETIPEEC 64

Query: 66  IDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKH 125
           ++  K+Y+   QY++DS+   ++   Y      L    KD ++F +D T+LS IPY+KKH
Sbjct: 65  VEATKEYIHGEQYRSDSKTVNQQAYFYAR---DLEVHPKDTFVFSIDGTVLSNIPYYKKH 121

Query: 126 GFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI 185
           G+G E+ N++ ++ W+ +  APAL  TL  ++++ + G KI  +S R    ++ T  NL 
Sbjct: 122 GYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLK 181

Query: 186 HVGYHGWASLELRGLED-EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK- 243
             GYH W  L L+  +D        YK   R++L+++GY I G++GDQWS   G  + + 
Sbjct: 182 KAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGES 241

Query: 244 RTFKLPNSMYYL 255
           RTFKLPN +YY+
Sbjct: 242 RTFKLPNPLYYI 253

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2

 Score =  168 bits (425), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 140/247 (56%), Gaps = 5/247 (2%)

Query: 6   VLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQEC 65
           VL+    ++ +A     +++   R+       + +  C SWR+ VE +NI  FE +P+EC
Sbjct: 2   VLVFFVATILVAWQCHAYDMFPLRMNTGYGARTPEVKCASWRLAVEAHNIFGFETIPEEC 61

Query: 66  IDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKH 125
           ++  K+Y+   QY++DS+   ++   Y      L    KD ++F +D T+LS IPY+KKH
Sbjct: 62  VEATKEYIHGEQYRSDSKTVNQQAYFYAR---DLEVHPKDTFVFSIDGTVLSNIPYYKKH 118

Query: 126 GFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI 185
           G+G E+ N++ ++ W+ +  APAL  TL  ++++ + G KI  +S R    ++ T  NL 
Sbjct: 119 GYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLK 178

Query: 186 HVGYHGWASLELRGLED-EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK- 243
             GYH W  L L+  +D        YK   R++L+++GY I G++GDQWS   G  + + 
Sbjct: 179 KAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGES 238

Query: 244 RTFKLPN 250
           RTFKLPN
Sbjct: 239 RTFKLPN 245

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1

 Score =  162 bits (409), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 135/236 (57%), Gaps = 4/236 (1%)

Query: 21  ADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKA 80
           A +     R++    + S +  C S+R+ VE +NIR F+ +P+EC++  K Y+   Q+++
Sbjct: 21  AGYQRFPLRMKTGYGERSSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRS 80

Query: 81  DSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAW 140
           DS+   ++   Y S          D +IF +D+T+LS IPY++KHG+G E  N + ++ W
Sbjct: 81  DSKTVNQQAFFYAS---EREVHHNDIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEW 137

Query: 141 MKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL 200
           + +  APAL  TL  ++++ + G KI  +S R     + T  NL   G+H W  L L+  
Sbjct: 138 VNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDP 197

Query: 201 EDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK-RTFKLPNSMYYL 255
                    YK+ +R+ L+++GYRI G++GDQWS   G  + + RTFKLPN MYY+
Sbjct: 198 HLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPNPMYYI 253

May function as somatic storage protein during early seedling development.

Glycine max (taxid: 3847)

>sp|O82122|VSP2_ARATH Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1

 Score =  159 bits (403), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 128/215 (59%), Gaps = 5/215 (2%)

Query: 43  CESWRINVELNNIREFEVVPQECIDHIKKYM-TSSQYKADSQRAAEEVKLYLSGCCSLAG 101
           C SW + VE +NI +F+ VP  C D+++ Y+ TS QY+ DS+   +E   Y  G  +L  
Sbjct: 52  CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGL-ALKN 110

Query: 102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKE-SKAPALEHTLNLFHEIK 160
           D  + WIFD+DDTLLS+IPY+ K+G+G E+ +  ++  W+   +  P L   L+L+  I 
Sbjct: 111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170

Query: 161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
             G++  ++S R +  ++ T+DNL   G   W  L L+      ++V  YK++VRK LVK
Sbjct: 171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQV-VYKSKVRKSLVK 229

Query: 221 EGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
           +GY I G +GDQW+       P R FKLPN +YY+
Sbjct: 230 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 263

May function as somatic storage protein during early seedling development.

Arabidopsis thaliana (taxid: 3702)

>sp|O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 127/215 (59%), Gaps = 5/215 (2%)

Query: 43  CESWRINVELNNIREFEVVPQECIDHIKKYM-TSSQYKADSQRAAEEVKLYLSGCCSLAG 101
           C SW + VE +NI  F+ VP  C  +++ Y+ TS QY+ DS+   +E   Y  G  +L  
Sbjct: 57  CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGL-ALKN 115

Query: 102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKA-PALEHTLNLFHEIK 160
           D  + WIFD+DDTLLS+IPY+ K+G+G E     ++ +W++  ++ P L  TL+L+  + 
Sbjct: 116 DTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLL 175

Query: 161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
             G++  ++S R + L   TV+NL  VG   W  L L+    +  +V  YK++VR  LVK
Sbjct: 176 ELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQV-VYKSKVRNSLVK 234

Query: 221 EGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
           +GY I G +GDQW+       P R FKLPN +YY+
Sbjct: 235 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 268

May function as somatic storage protein during early seedling development.

Arabidopsis thaliana (taxid: 3702)

>sp|O04195|Y2992_ARATH Uncharacterized protein At2g39920 OS=Arabidopsis thaliana GN=At2g39920 PE=2 SV=2

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 30/215 (13%)

Query: 42  YCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAG 101
           YC+   ++ +LN++ E   +P  C D     +    Y  +     +    Y      +  
Sbjct: 87  YCKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPM-N 145

Query: 102 DGKDAWIFDVDDT-LLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIK 160
           D  D  + D+DDT LL    Y+ K               +++E+K       L L+ +++
Sbjct: 146 DNCDVVVIDIDDTNLLEQDSYYMK---------------YIEEAKHQKSILILALYSKLR 190

Query: 161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
           ++G  + L+S R E+ R+ T++ L   GY  W+ L +   ED  +K +          ++
Sbjct: 191 SQGYSMVLLSRRPETERNATIEQLKSRGYSDWSHL-IMSREDTRQKEE----------LE 239

Query: 221 EGYRIWGVVGDQWSSFEGL--PKPKRTFKLPNSMY 253
            G+R+ GV+G+      G    + KR FKLP+  Y
Sbjct: 240 RGHRVIGVIGNHMDVLRGQWNWQSKRLFKLPSLTY 274

Arabidopsis thaliana (taxid: 3702)

>sp|P26093|HEL_HAEIN Lipoprotein E OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hel PE=1 SV=2

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)

Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
           D+D+T+L   PY        +  +   W  W+   ++ A+   +   + + +   K+F V
Sbjct: 84  DLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 143

Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
           ++R++S  +S T+D++  +G++G             KK +  KA     + K+GY I   
Sbjct: 144 TNRKDSTEKSGTIDDMKRLGFNGVEESAFY-----LKKDKSAKAARFAEIEKQGYEIVLY 198

Query: 229 VGDQWSSF 236
           VGD    F
Sbjct: 199 VGDNLDDF 206

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
224065553	255	predicted protein [Populus trichocarpa]	0.996	1.0	0.738	1e-111
255571216	272	Acid phosphatase 1 precursor, putative [	0.980	0.922	0.75	1e-109
356505054	276	PREDICTED: acid phosphatase 1-like [Glyc	0.914	0.847	0.714	1e-100
255637521	276	unknown [Glycine max]	0.914	0.847	0.697	1e-97
225438005	256	PREDICTED: acid phosphatase 1 [Vitis vin	0.996	0.996	0.657	1e-95
224110630	256	predicted protein [Populus trichocarpa]	0.996	0.996	0.632	1e-94
363808306	285	uncharacterized protein LOC100811100 pre	0.906	0.814	0.676	2e-94
449433229	252	PREDICTED: acid phosphatase 1-like [Cucu	0.968	0.984	0.594	1e-86
356534686	255	PREDICTED: acid phosphatase 1-like [Glyc	0.996	1.0	0.566	2e-86
357439757	254	Stem 28 kDa glycoprotein [Medicago trunc	0.960	0.968	0.580	3e-86

>gi|224065553|ref|XP_002301854.1| predicted protein [Populus trichocarpa] gi|118483743|gb|ABK93764.1| unknown [Populus trichocarpa] gi|222843580|gb|EEE81127.1| predicted protein [Populus trichocarpa]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/256 (73%), Positives = 219/256 (85%), Gaps = 1/256 (0%)

Query: 1   MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEV 60
           MARN V ILA TSL I  A ADWNIL ++ +      SLK YCESWRINVELNNI++FEV
Sbjct: 1   MARNLVFILALTSLYIGLAAADWNILNKKSKNRDAS-SLKNYCESWRINVELNNIKDFEV 59

Query: 61  VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIP 120
           VPQEC+DH+K YMTSSQY ADS+RA EEV+LYLS CC+L GDGKDAWIFDVDDTLLSTIP
Sbjct: 60  VPQECVDHVKHYMTSSQYTADSERAIEEVRLYLSSCCTLEGDGKDAWIFDVDDTLLSTIP 119

Query: 121 YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT 180
           Y+KKHGFGGE+LNA+ +E+WMK+ KAPAL+HTL  FHEIK +GVKIFL+SSR E+LRS T
Sbjct: 120 YYKKHGFGGEKLNATLFESWMKQGKAPALDHTLKFFHEIKGKGVKIFLISSRSETLRSAT 179

Query: 181 VDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP 240
           V+NLI+ GYHGW+SL LRGLED++ KVQQYK++ R+ L KEGYRIWG++GDQWSS EGLP
Sbjct: 180 VENLINAGYHGWSSLILRGLEDDFMKVQQYKSEARRALTKEGYRIWGIIGDQWSSVEGLP 239

Query: 241 KPKRTFKLPNSMYYLS 256
             KRTFKLPNSMYYLS
Sbjct: 240 GAKRTFKLPNSMYYLS 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571216|ref|XP_002526558.1| Acid phosphatase 1 precursor, putative [Ricinus communis] gi|223534119|gb|EEF35836.1| Acid phosphatase 1 precursor, putative [Ricinus communis]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/256 (75%), Positives = 216/256 (84%), Gaps = 5/256 (1%)

Query: 1   MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKD----SLKTYCESWRINVELNNIR 56
           MARN V ILA TSLCI+   ADWNIL Q+ RR+  K      LK YCESWRINVELNNIR
Sbjct: 1   MARNLVFILALTSLCISLVAADWNILNQK-RRNGFKSESTSGLKNYCESWRINVELNNIR 59

Query: 57  EFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLL 116
           EF+VVPQECI +IK YMTSSQY+ADS+RA EEVKLYLS CC L  DGKDAWIFDVDDTLL
Sbjct: 60  EFKVVPQECIAYIKHYMTSSQYEADSERAIEEVKLYLSTCCHLQSDGKDAWIFDVDDTLL 119

Query: 117 STIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL 176
           STIPY+KKHGFGGE+LN S  E WMKESKAPALEHTL LFH IK++GVKIFLVSSR E+L
Sbjct: 120 STIPYYKKHGFGGEKLNTSLLEEWMKESKAPALEHTLKLFHVIKDKGVKIFLVSSRSETL 179

Query: 177 RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSF 236
           RS TVDNLI+VGYHGW+SL LRGLEDE+  +Q+YK++ RKRL+ EGYRIWG++GDQWSS 
Sbjct: 180 RSATVDNLINVGYHGWSSLILRGLEDEFTNLQEYKSKARKRLMDEGYRIWGIIGDQWSSI 239

Query: 237 EGLPKPKRTFKLPNSM 252
           +GLP  KRTFKLPNS+
Sbjct: 240 KGLPSAKRTFKLPNSI 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505054|ref|XP_003521307.1| PREDICTED: acid phosphatase 1-like [Glycine max]

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 168/235 (71%), Positives = 203/235 (86%), Gaps = 1/235 (0%)

Query: 21  ADWNILTQRIRRHAV-KDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYK 79
            +WNIL QR+ +  V  D+LK YCESWRINVELNNIR F VVPQEC+DH+KKYMTSSQYK
Sbjct: 40  PEWNILNQRLGKGVVVGDNLKNYCESWRINVELNNIRGFSVVPQECVDHVKKYMTSSQYK 99

Query: 80  ADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEA 139
           ADS RA EE++LY+SG C+L  DGKD+WIFD+D+TLLSTIPY+KKHGFGGE+LNA+S E 
Sbjct: 100 ADSVRAVEEIRLYMSGFCTLKDDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNATSLEE 159

Query: 140 WMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG 199
           WM++SKAPAL+HTL LFHEIKN+G KIFL+SSR+E+LRS TVDNL+ VGYHGW  L LRG
Sbjct: 160 WMEKSKAPALDHTLELFHEIKNKGFKIFLISSRKENLRSPTVDNLVSVGYHGWNRLTLRG 219

Query: 200 LEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYY 254
            +DE   V++Y ++VR++LV EGYRIWG+VGDQWS+F+GLP  KRTFKLPNS+YY
Sbjct: 220 FDDELMDVKKYHSKVRQQLVDEGYRIWGIVGDQWSTFDGLPMAKRTFKLPNSIYY 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637521|gb|ACU19087.1| unknown [Glycine max]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 164/235 (69%), Positives = 199/235 (84%), Gaps = 1/235 (0%)

Query: 21  ADWNILTQRIRRHAV-KDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYK 79
            +WNIL QR+ +  V  D+LK YCESWRINVELNNIR F VVPQEC+DH+KKYMTSSQYK
Sbjct: 40  PEWNILNQRLGKGVVVGDNLKNYCESWRINVELNNIRGFSVVPQECVDHVKKYMTSSQYK 99

Query: 80  ADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEA 139
           ADS RA EE++LY+SG C+L  DGKD+WIFD+D+TLLSTIPY+KKHGFGGE+LNA+S E 
Sbjct: 100 ADSVRAVEEIRLYMSGFCTLKDDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNATSLEE 159

Query: 140 WMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG 199
           WM++SKAPA +HTL  FHEIKN+G KIFL+ SR+E+LR  TVDNL+ VGYHGW  L LRG
Sbjct: 160 WMEKSKAPAFDHTLEFFHEIKNKGFKIFLIFSRKENLRFPTVDNLVSVGYHGWNRLTLRG 219

Query: 200 LEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYY 254
            +DE   V++Y ++VR++LV EGYRIWG+VGDQWS+F+GLP  KRTFKLPNS+YY
Sbjct: 220 FDDELMDVKKYHSKVRQQLVDEGYRIWGIVGDQWSTFDGLPMAKRTFKLPNSIYY 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438005|ref|XP_002273448.1| PREDICTED: acid phosphatase 1 [Vitis vinifera] gi|297744203|emb|CBI37173.3| unnamed protein product [Vitis vinifera]

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 169/257 (65%), Positives = 204/257 (79%), Gaps = 2/257 (0%)

Query: 1   MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEV 60
           M +N   +LAFT L I+SA+ADWNIL +  +   V++ LK YCESWRINVELNNI+ F+V
Sbjct: 1   MGKNLGFLLAFTGLLISSAVADWNIL-RPWKSSLVQEGLKNYCESWRINVELNNIKGFDV 59

Query: 61  VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLS-GCCSLAGDGKDAWIFDVDDTLLSTI 119
           VPQEC++ + KYMTSSQYKAD +RA EE  LYLS GCCSL GD KDAWIFD+DDTL+S +
Sbjct: 60  VPQECVEFVGKYMTSSQYKADIERAIEESVLYLSKGCCSLKGDDKDAWIFDIDDTLVSIV 119

Query: 120 PYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSY 179
           PY+KKH FGGE+LN +S E WM++++APAL  TL  F++I+ RG KIFL+SSRRE LRS 
Sbjct: 120 PYYKKHHFGGEKLNVTSLEEWMRKNRAPALRETLRFFNDIRGRGFKIFLISSRRECLRSS 179

Query: 180 TVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL 239
           T DNLI VGYHGW  L LR   DE  +VQ+YKA+ R+ LVKEGYRIWG+VGDQWSSFEG 
Sbjct: 180 TADNLIKVGYHGWTRLILRKEADELMEVQKYKAKARQGLVKEGYRIWGIVGDQWSSFEGT 239

Query: 240 PKPKRTFKLPNSMYYLS 256
           P  KRTFKLPN +YY+S
Sbjct: 240 PSAKRTFKLPNPLYYVS 256

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110630|ref|XP_002315584.1| predicted protein [Populus trichocarpa] gi|222864624|gb|EEF01755.1| predicted protein [Populus trichocarpa]

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 162/256 (63%), Positives = 201/256 (78%), Gaps = 1/256 (0%)

Query: 1   MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEV 60
           M R    +L F+S  I++ LADWNIL QR +   +K SLK+YCESWRINVEL+NI++F V
Sbjct: 2   MGRLLGFLLCFSSFFISATLADWNILNQRTKS-GLKISLKSYCESWRINVELHNIQDFTV 60

Query: 61  VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIP 120
           VP+EC+ +I KY+ SSQY  DS+R  EE +LYLS  C L  DG+DAW+FD+DDTLLST+P
Sbjct: 61  VPEECVSYIGKYVASSQYHVDSERTIEECRLYLSTSCPLKKDGRDAWLFDIDDTLLSTVP 120

Query: 121 YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT 180
           YFKKH FGGE+LN +S E WM   KAPALEH+L  F E+K+ GV+IFLVSSRRE LRS T
Sbjct: 121 YFKKHHFGGEKLNLTSLEGWMSNGKAPALEHSLKFFDELKSTGVQIFLVSSRREHLRSAT 180

Query: 181 VDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP 240
           +DNL+ VGYHGW  L LRG +DE  +VQQYKA VRK+L+  G+RIWG+VGDQ+SSFEGLP
Sbjct: 181 IDNLVDVGYHGWTRLILRGPDDELNEVQQYKANVRKQLISNGFRIWGIVGDQYSSFEGLP 240

Query: 241 KPKRTFKLPNSMYYLS 256
             +R+FKLPN +YY+S
Sbjct: 241 SARRSFKLPNPLYYVS 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808306|ref|NP_001242245.1| uncharacterized protein LOC100811100 precursor [Glycine max] gi|255634555|gb|ACU17640.1| unknown [Glycine max]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 157/232 (67%), Positives = 191/232 (82%)

Query: 21  ADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKA 80
            +WNIL QR+R+  V D+LK YCESWRINVELNNIR F VVPQEC+DH+KKYMTSSQY  
Sbjct: 40  PEWNILNQRLRKGVVGDNLKNYCESWRINVELNNIRGFSVVPQECVDHVKKYMTSSQYSV 99

Query: 81  DSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAW 140
           DS RA EE++LY+SG C+L  DGKD+WIFD+D+TLLSTIPY+KKHGFGGE+LN +S E W
Sbjct: 100 DSVRAVEEIRLYMSGFCTLKDDGKDSWIFDIDETLLSTIPYYKKHGFGGEKLNVTSLEEW 159

Query: 141 MKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL 200
           MK+SKAPAL+HTL LFHEIKN+G KIFL+SSR+E+LRS TVDNL+ VGYHGW  L LRG 
Sbjct: 160 MKKSKAPALDHTLELFHEIKNKGFKIFLISSRKENLRSPTVDNLVSVGYHGWTRLTLRGF 219

Query: 201 EDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSM 252
           +DE  +V++Y + VR++LV EGY IWG+VGDQWS+F+GLP P+     P   
Sbjct: 220 DDELVEVKKYHSMVRQQLVDEGYNIWGIVGDQWSTFDGLPWPREHSNYPTPF 271

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433229|ref|XP_004134400.1| PREDICTED: acid phosphatase 1-like [Cucumis sativus] gi|449486761|ref|XP_004157394.1| PREDICTED: acid phosphatase 1-like [Cucumis sativus]

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 148/249 (59%), Positives = 193/249 (77%), Gaps = 1/249 (0%)

Query: 7   LILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECI 66
            +  F +L I ++ +DWNIL+QR  +  +K SLK YCESWR+NVEL+NIR F VVP+EC+
Sbjct: 4   FLFIFLALLITASASDWNILSQR-SKSGLKISLKNYCESWRLNVELHNIRFFRVVPEECV 62

Query: 67  DHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHG 126
            +I KY+TS+QYK DS+R  EE  +YLS  C L GDG DAWIFD+DDTL+ST+PY+KK+ 
Sbjct: 63  SYIGKYVTSTQYKVDSERTIEECVVYLSKGCDLKGDGTDAWIFDIDDTLISTVPYYKKNQ 122

Query: 127 FGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH 186
           +GG++LN +  EAWM +++AP LEHTL LF+ +K +GV I L+S+RRE LRS T++NL+ 
Sbjct: 123 YGGKKLNLTDLEAWMSKARAPILEHTLRLFNFLKAKGVDIILISARREGLRSATIENLVQ 182

Query: 187 VGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTF 246
           VGYHGW +L LR  EDE K V+QYKA VR+RLV  GY IWG+VGDQ+SS +G P  +RTF
Sbjct: 183 VGYHGWTNLILRSPEDEKKGVEQYKADVRRRLVNGGYHIWGIVGDQYSSIQGSPSGRRTF 242

Query: 247 KLPNSMYYL 255
           KLPN MYY+
Sbjct: 243 KLPNPMYYV 251

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534686|ref|XP_003535883.1| PREDICTED: acid phosphatase 1-like [Glycine max]

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 145/256 (56%), Positives = 199/256 (77%), Gaps = 1/256 (0%)

Query: 1   MARNSVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEV 60
           M +     L FT L I  A+ADWNIL  + +   +K SLK YCESWR+NVEL+NIR+F+V
Sbjct: 1   MGKTLWFFLVFTCLLIPLAVADWNILKLQTQ-DGLKISLKNYCESWRMNVELHNIRDFQV 59

Query: 61  VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIP 120
           VP+EC ++I KY+ S+QYK DSQRA+EE  +YLS  C+L  DG DAWIFD+DDTLLST+P
Sbjct: 60  VPEECTEYIGKYVKSTQYKVDSQRASEECLVYLSTSCNLKKDGLDAWIFDIDDTLLSTVP 119

Query: 121 YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT 180
           Y+K + +GG++LN +S E WM++  APAL+H+LNL++E+K+RGV+I +V+SR+E LRS T
Sbjct: 120 YYKNNLYGGKKLNVTSLEEWMRKGNAPALDHSLNLYNELKSRGVQIIMVTSRKEHLRSAT 179

Query: 181 VDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP 240
           +DNL+ VGY+GW  +  R   +E   VQ+YK+ VR++++ EGYRIWG+VGDQ+SS EG+P
Sbjct: 180 IDNLVKVGYYGWTKIVFRDPANELVSVQKYKSDVRRQIINEGYRIWGIVGDQYSSIEGIP 239

Query: 241 KPKRTFKLPNSMYYLS 256
            P+R FKLPN MYY++
Sbjct: 240 NPRRAFKLPNPMYYVA 255

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357439757|ref|XP_003590156.1| Stem 28 kDa glycoprotein [Medicago truncatula] gi|355479204|gb|AES60407.1| Stem 28 kDa glycoprotein [Medicago truncatula]

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 144/248 (58%), Positives = 197/248 (79%), Gaps = 2/248 (0%)

Query: 9   LAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQECIDH 68
           L  T L I   +ADWNIL  ++ R+  K SLK YCESWR+NVEL+NIR+FEVVP+ECI++
Sbjct: 9   LVCTCLLIPLVVADWNIL--KLSRNGFKISLKNYCESWRMNVELHNIRDFEVVPEECIEY 66

Query: 69  IKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFG 128
           I KYM S+QYK DS+RA EE  +YLS  C+L  DG+DAWIFD+DDTLLST+PY+K + +G
Sbjct: 67  IGKYMKSTQYKVDSERAIEECLVYLSTSCNLKKDGRDAWIFDIDDTLLSTVPYYKNNQYG 126

Query: 129 GERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVG 188
           G +LN +S E WM++ KAPAL+H+L LF+E+K+RG++I L+++RRE LRS T+DNL++VG
Sbjct: 127 GNKLNVTSLEQWMRKGKAPALDHSLKLFNELKSRGIQIILITARREHLRSATIDNLLNVG 186

Query: 189 YHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKL 248
           Y+GW  +  R   +E+  V++YK+ VR+ ++  GYRIWG++GDQ+SS EG+P P+RTFKL
Sbjct: 187 YYGWTRIFFRDTANEFVSVKKYKSDVRREVMNGGYRIWGILGDQYSSIEGIPSPRRTFKL 246

Query: 249 PNSMYYLS 256
           PN MYY+S
Sbjct: 247 PNPMYYVS 254

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
TAIR|locus:2024102	271	AT1G04040 [Arabidopsis thalian	1.0	0.944	0.583	1.8e-80
TAIR|locus:2172447	272	AT5G44020 [Arabidopsis thalian	0.996	0.937	0.564	2.7e-75
TAIR|locus:2117338	260	AT4G25150 [Arabidopsis thalian	0.972	0.957	0.406	1.9e-51
TAIR|locus:2176267	257	AT5G51260 [Arabidopsis thalian	0.968	0.964	0.38	4.6e-50
TAIR|locus:2064128	251	AT2G38600 [Arabidopsis thalian	0.835	0.852	0.398	3e-46
TAIR|locus:2118314	255	AT4G29260 [Arabidopsis thalian	0.832	0.835	0.387	2.7e-45
TAIR|locus:2118329	256	AT4G29270 [Arabidopsis thalian	0.859	0.859	0.407	3.4e-45
TAIR|locus:2184580	265	VSP2 "AT5G24770" [Arabidopsis	0.820	0.792	0.390	1.3e-38
TAIR|locus:2184585	270	VSP1 "AT5G24780" [Arabidopsis	0.820	0.777	0.390	2.6e-38
TIGR_CMR|CBU_0335	221	CBU_0335 "acid phosphatase, cl	0.718	0.832	0.326	2.5e-19

TAIR|locus:2024102 AT1G04040 [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 158/271 (58%), Positives = 199/271 (73%)

Query:     1 MARNSVLILAFTSLCIASALA-DWNILTQR-----------IRRHAVKDSLKTYCESWRI 48
             M R   L L   SL +    A DWNIL Q            I    +K  LK YCESWRI
Sbjct:     1 MDRTMFLSLTIASLLVGVVSAGDWNILNQLRGLGSSSSQNGIVSKGIKTDLKGYCESWRI 60

Query:    49 NVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYL-SGCCSLAG-DGKDA 106
             NVE++NIR+F+VVPQEC+ HIK YMTSSQYK D  R  +EV L+  S CCS +  DG DA
Sbjct:    61 NVEVHNIRKFDVVPQECVSHIKDYMTSSQYKDDVARTVDEVILHFGSMCCSKSKCDGMDA 120

Query:   107 WIFDVDDTLLSTIPYFKKHGF-GGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVK 165
             WIFD+DDTLLSTIPY KK+GF GGE+LN++ +E W+++ KAPA+ H   L+H+I+ RG+K
Sbjct:   121 WIFDIDDTLLSTIPYHKKNGFFGGEKLNSTKFEDWIQKKKAPAVPHMKKLYHDIRERGIK 180

Query:   166 IFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRI 225
             IFL+SSR+E LRS TVDNLI  GY+GW++L LRGLED+ K+V+QYK++ RK L+  GYR+
Sbjct:   181 IFLISSRKEYLRSATVDNLIQAGYYGWSNLMLRGLEDQQKEVKQYKSEKRKWLMSLGYRV 240

Query:   226 WGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS 256
             WGV+GDQWSSF G P P+RTFKLPNS+YY++
Sbjct:   241 WGVMGDQWSSFAGCPLPRRTFKLPNSIYYVA 271

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2172447 AT5G44020 [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 154/273 (56%), Positives = 191/273 (69%)

Query:     1 MARNSVLILAFTSLC--IASALADWNILTQ--------RIRRHAVKD----SLKTYCESW 46
             MAR+ +L L  T L   I SA  DWNIL+Q        +  +  V      +L  YCESW
Sbjct:     1 MARSLLLSLTLTFLFAGIVSA-RDWNILSQLKGTTTTTKTSQTGVTSLKAPNLNGYCESW 59

Query:    47 RINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSG-CCSLAG-DGK 104
             R+NVELNNIR+F+VVPQEC+  ++KYMTSSQY+ D +RA +E  LYL   CC     DG 
Sbjct:    60 RVNVELNNIRDFKVVPQECVWFVQKYMTSSQYEDDVERAVDEAILYLGKTCCEKKTCDGM 119

Query:   105 DAWIFDVDDTLLSTIPYFKKHG-FGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRG 163
             DAWIFD+DDTLLSTIPY K +G FGGE+LN + +E W    KAPA+ H + L+HEI+ RG
Sbjct:   120 DAWIFDIDDTLLSTIPYHKSNGCFGGEQLNTTKFEEWQNSGKAPAVPHMVKLYHEIRERG 179

Query:   164 VKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY 223
              KIFL+SSR+E LRS TV+NLI  GYH W++L LRG +DE K V QYKA +R  L   GY
Sbjct:   180 FKIFLISSRKEYLRSATVENLIEAGYHSWSNLLLRGEDDEKKSVSQYKADLRTWLTSLGY 239

Query:   224 RIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS 256
             R+WGV+G QW+SF G P PKRTFKLPNS+YY++
Sbjct:   240 RVWGVMGAQWNSFSGCPVPKRTFKLPNSIYYVA 272

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2117338 AT4G25150 [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 102/251 (40%), Positives = 158/251 (62%)

Query:     5 SVLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQE 64
             S++ LAF++   +S L    ++ +   ++ + D++  +C SWR   E NN+  ++ +P E
Sbjct:    11 SLIPLAFSNENSSSYLIARPLIFETQLKN-INDNVNLHCTSWRFAAETNNLAPWKTIPAE 69

Query:    65 CIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKK 124
             C D++K Y+    Y  D +R +EE K+Y S   S  GDGKD WIFD+D+TLLS +PY+ +
Sbjct:    70 CADYVKDYLMGEGYVVDVERVSEEAKVYASSFES-NGDGKDIWIFDIDETLLSNLPYYME 128

Query:   125 HGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL 184
             HG G E  + S ++ W+++  APA+  +L L+ ++ + G K+ L++ RRE+ R  TV+NL
Sbjct:   129 HGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHLGYKVILLTGRRENHRVITVENL 188

Query:   185 IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKR 244
              + G+H W  L LR L+D  K    YK++ R+ +VKEGYRI G  GDQWS   G    +R
Sbjct:   189 RNAGFHNWDKLILRSLDDRNKTATMYKSEKREEMVKEGYRIRGNSGDQWSDLLGSAMSER 248

Query:   245 TFKLPNSMYYL 255
             +FKLPN MYY+
Sbjct:   249 SFKLPNPMYYI 259

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2176267 AT5G51260 [Arabidopsis thaliana (taxid:3702)]

 Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
 Identities = 95/250 (38%), Positives = 152/250 (60%)

Query:     6 VLILAFTSLCIASALADWNILTQRIRRHAVKDSLKTYCESWRINVELNNIREFEVVPQEC 65
             V++  FTS   + ++ ++    +   + A ++ +  +C +WR   E+NN+  ++ +P EC
Sbjct:     9 VVVSLFTS-AFSDSILEYPSEIESRHKKAAEEDVNLHCTTWRFAAEMNNLAPWKTIPVEC 67

Query:    66 IDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKH 125
              D++K Y+    Y  D +R +EE  ++       +GDGKD WIFD+D+TLLS +PY+  H
Sbjct:    68 ADYVKDYVMGKGYLTDLERVSEEALIFARSI-EFSGDGKDIWIFDIDETLLSNLPYYIDH 126

Query:   126 GFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI 185
             GFG E  + S ++ W++   APA+  +L L+  + + G K+FL++ R+ES R  TV+NLI
Sbjct:   127 GFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVLDLGYKVFLLTGRKESHRLVTVENLI 186

Query:   186 HVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRT 245
             + G+  W  L LR  E+++K    YK++ R  +VKEGYRI G  GDQWS   G    +R+
Sbjct:   187 NAGFQNWDKLILRSPEEQHKMATLYKSEKRDEMVKEGYRIRGNSGDQWSDLLGTSMSQRS 246

Query:   246 FKLPNSMYYL 255
             FKL N MYY+
Sbjct:   247 FKLANPMYYI 256

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2064128 AT2G38600 [Arabidopsis thaliana (taxid:3702)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 86/216 (39%), Positives = 140/216 (64%)

Query:    41 TYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLA 100
             +YC SWR+ VE NN+R + +VP +C+ +++ YM + QY  D Q   +++K+YL+    L 
Sbjct:    36 SYCLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVDQIKVYLNEII-LP 94

Query:   101 GDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIK 160
             GDG DAWI DVDDT  S + Y++   +G +  + + +  W  + ++PA++  L LF+++ 
Sbjct:    95 GDGMDAWILDVDDTCFSNVFYYRLKRYGCDPYDPTGFRTWAMKGESPAIQPVLELFYKLI 154

Query:   161 NRGVKIFLVSSR-RESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLV 219
               G K+FLV+ R  E+LR  T++NL + G+ G+  L +R  +++ +    YK ++RK ++
Sbjct:   155 ETGFKVFLVTGRDEETLRQATLENLHNQGFTGYERLIMRTADNKRQSATTYKTRIRKEMM 214

Query:   220 KEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
             +EGYRIWG VGDQWS  +G     RTFK+PN MY++
Sbjct:   215 EEGYRIWGNVGDQWSDLQGEYSGDRTFKIPNPMYFV 250

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

TAIR|locus:2118314 AT4G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 83/214 (38%), Positives = 131/214 (61%)

Query:    42 YCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAG 101
             YC+SWR+  E NN+  ++++P  C+D + +Y+   Q+ +D      +  L  +    ++G
Sbjct:    42 YCDSWRLAAETNNVGTWDLIPSICVDSVAEYLNGDQFLSDYS-VIVDYALAFAKSVEISG 100

Query:   102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKN 161
             DGKD WIFD+D+TLL+ I Y+K HG+G E  + + +  W+++  APA + +L L++ +K 
Sbjct:   101 DGKDVWIFDIDETLLTNIDYYKAHGYGSEPYDDNKFSEWVEQGTAPAFDASLRLYNALKK 160

Query:   162 RGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKE 221
              G  I L++ R E  R+ T  NL   GY GW  L LRG  D+ K    YK++ R +L++E
Sbjct:   161 LGFTIILLTGRDEHQRTSTETNLRDAGYSGWERLLLRGPNDQGKSATNYKSEQRSKLIEE 220

Query:   222 GYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
             G++I G  GDQWS  +G     R+FK+PN MYY+
Sbjct:   221 GFKIRGNSGDQWSDLQGFAVADRSFKVPNPMYYI 254

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2118329 AT4G29270 [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 90/221 (40%), Positives = 131/221 (59%)

Query:    36 KDSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSG 95
             + S+ +YCESWR+  E NN+  ++V+P +C ++IK Y+   Q+  D    A     Y   
Sbjct:    37 RSSIASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAK- 95

Query:    96 CCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNL 155
                + GDGKDAW+FD+D+TLLS I Y+K +G+G E  ++  +   +++ K P  + +L L
Sbjct:    96 TVKVGGDGKDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRL 155

Query:   156 FHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVR 215
             +  +K  G  I L++ R E  RS T  NL   GY GW  L LRG  D+ K   QYK++ R
Sbjct:   156 YKALKKLGFTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQYKSEQR 215

Query:   216 KRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS 256
              ++VKEGY I G  GDQWS   G     R+FK+PN MYY++
Sbjct:   216 SQVVKEGYTIHGNTGDQWSDLLGFAVASRSFKVPNPMYYVA 256

GO:0003993 "acid phosphatase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2184580 VSP2 "AT5G24770" [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 84/215 (39%), Positives = 128/215 (59%)

Query:    43 CESWRINVELNNIREFEVVPQECIDHIKKYM-TSSQYKADSQRAAEEVKLYLSGCCSLAG 101
             C SW + VE +NI +F+ VP  C D+++ Y+ TS QY+ DS+   +E   Y  G  +L  
Sbjct:    52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGL-ALKN 110

Query:   102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKE-SKAPALEHTLNLFHEIK 160
             D  + WIFD+DDTLLS+IPY+ K+G+G E+ +  ++  W+   +  P L   L+L+  I 
Sbjct:   111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170

Query:   161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
               G++  ++S R +  ++ T+DNL   G   W  L L+      ++V  YK++VRK LVK
Sbjct:   171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNLRQVV-YKSKVRKSLVK 229

Query:   221 EGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
             +GY I G +GDQW+       P R FKLPN +YY+
Sbjct:   230 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 263

GO:0003993 "acid phosphatase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0009753 "response to jasmonic acid stimulus" evidence=TAS

GO:0042538 "hyperosmotic salinity response" evidence=IGI

GO:0006979 "response to oxidative stress" evidence=IEP

GO:0046688 "response to copper ion" evidence=IEP

GO:0009625 "response to insect" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0002213 "defense response to insect" evidence=IDA

TAIR|locus:2184585 VSP1 "AT5G24780" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 84/215 (39%), Positives = 127/215 (59%)

Query:    43 CESWRINVELNNIREFEVVPQECIDHIKKYM-TSSQYKADSQRAAEEVKLYLSGCCSLAG 101
             C SW + VE +NI  F+ VP  C  +++ Y+ TS QY+ DS+   +E   Y  G  +L  
Sbjct:    57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGL-ALKN 115

Query:   102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKA-PALEHTLNLFHEIK 160
             D  + WIFD+DDTLLS+IPY+ K+G+G E     ++ +W++  ++ P L  TL+L+  + 
Sbjct:   116 DTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLL 175

Query:   161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK 220
               G++  ++S R + L   TV+NL  VG   W  L L+    +  +V  YK++VR  LVK
Sbjct:   176 ELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQVV-YKSKVRNSLVK 234

Query:   221 EGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
             +GY I G +GDQW+       P R FKLPN +YY+
Sbjct:   235 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYV 268

GO:0003993 "acid phosphatase activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;TAS

GO:0008134 "transcription factor binding" evidence=IDA

GO:0006952 "defense response" evidence=IEP

GO:0005773 "vacuole" evidence=IDA

TIGR_CMR|CBU_0335 CBU_0335 "acid phosphatase, class B" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 64/196 (32%), Positives = 92/196 (46%)

Query:    66 IDHIKK----YMTSSQYKADSQRAAEEVKLYLSGCCS----LAGDGKDAWIFDVDDTLLS 117
             +D +KK    Y  S +Y  D  +     K YL+         +   K A + D+D+T LS
Sbjct:    30 LDSLKKEIIHYHESGEYDVDISKVTHLAKRYLADRIRENQHASHPKKLAMVLDIDETSLS 89

Query:   118 TIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLR 177
                  K   FGG  L     EA   +   PA+  TLNL+      GV +F ++ R+E  R
Sbjct:    90 NYSDIKVLNFGGTFLQQDLAEA---DGDDPAITPTLNLYRYAIQHGVAVFFITGRQEKYR 146

Query:   178 SYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFE 237
             + T+ NL   GY  WA L ++  +        YK   RK + KEGY I   +GDQ+S  +
Sbjct:   147 TATIKNLKTAGYSQWARLYMKPNDYRLNSAAPYKISERKAIEKEGYDIVLNMGDQYSDLK 206

Query:   238 GLPKPKRTFKLPNSMY 253
             G    + ++KLPN MY
Sbjct:   207 G-GYSEHSYKLPNFMY 221

GO:0003993 "acid phosphatase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	256
TIGR01675	229	TIGR01675, plant-AP, plant acid phosphatase	1e-106
pfam03767	213	pfam03767, Acid_phosphat_B, HAD superfamily, subfa	7e-89
TIGR01680	275	TIGR01680, Veg_Stor_Prot, vegetative storage prote	4e-50
TIGR01533	266	TIGR01533, lipo_e_P4, 5'-nucleotidase, lipoprotein	8e-14
COG2503	274	COG2503, COG2503, Predicted secreted acid phosphat	2e-10

>gnl|CDD|130736 TIGR01675, plant-AP, plant acid phosphatase

 Score =  305 bits (784), Expect = e-106
 Identities = 118/217 (54%), Positives = 152/217 (70%), Gaps = 1/217 (0%)

Query: 39  LKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCS 98
              YC SWR+ VE NNIR+++ VP EC D+++ YMTS QYK D +R  +E   Y      
Sbjct: 13  DYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVVDEAYFYAKSLA- 71

Query: 99  LAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHE 158
           L+GDG DAWIFDVDDTLLS IPY+KKHG+G E+ + +++  W+ +  APAL   L L+ +
Sbjct: 72  LSGDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQK 131

Query: 159 IKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRL 218
           I   G+KIFL+S R E LR+ T+DNLI+ G+ GW  L LRGLED  K V  YK++VRK L
Sbjct: 132 IIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSL 191

Query: 219 VKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYL 255
           ++EGYRIWG +GDQWS   G P  +RTFKLPN MYY+
Sbjct: 192 MEEGYRIWGNIGDQWSDLLGSPPGRRTFKLPNPMYYV 228

This model represents a family of acid phosphatase from plants which are most closely related to the (so called) class B non-specific acid phosphatase OlpA (TIGR01533, which is believed to be a 5'-nucleotide phosphatase) and somewhat more distantly to another class B phosphatase, AphA (TIGR01672). Together these three clades define a subfamily (pfam03767) which corresponds to the IIIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. It has been reported that the best substrate for this enzyme that could be found was purine 5'-nucleoside phosphates. This is in concordance with the assignment of the H. influenzae hel protein (from TIGR01533) as a 5'-nucleotidase, however there is presently no other evidence to support this specific function for these plant phosphatases. Many genes from this family have been annotated as vegetative storage proteins due to their close homology with these earlier-characterized gene products which are highly expressed in leaves. There are significant differences however, including expression levels and distribution. The most important difference is the lack in authentic VSPs of the nucleophilic aspartate residue, which is instead replaced by serine, glycine or asparagine. Thus these proteins can not be expected to be active phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. Length = 229

>gnl|CDD|217719 pfam03767, Acid_phosphat_B, HAD superfamily, subfamily IIIB (Acid phosphatase)

 Score =  261 bits (670), Expect = 7e-89
 Identities = 101/212 (47%), Positives = 136/212 (64%), Gaps = 2/212 (0%)

Query: 44  ESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDG 103
            SWR+ VE NNIR F+ +P EC+D++K YM   QY +DS+   ++   Y      L GD 
Sbjct: 1   ASWRLAVETNNIRPFKTIPAECVDYVKDYMNGQQYSSDSKAVVDQAYNYAKERE-LHGDK 59

Query: 104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRG 163
           KDA +FD+D+T+LS  PY+  HG+GGE  +   ++ W+ + +APAL   L L++ +   G
Sbjct: 60  KDAVVFDIDETVLSNSPYYAYHGYGGEPFDPEKFDEWVNKGEAPALPGALELYNYLVELG 119

Query: 164 VKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY 223
           VKIF VS R E LR+ TV+NL   G+HGW  L LRG +D  K    YK++ RK+LVK+GY
Sbjct: 120 VKIFFVSGRSEDLRAATVENLKKAGFHGWEKLILRGKKDSNKSATSYKSERRKKLVKKGY 179

Query: 224 RIWGVVGDQWSSFEGL-PKPKRTFKLPNSMYY 254
            I G +GDQWS F G   +  RTFKLPN MYY
Sbjct: 180 NIVGNIGDQWSDFLGNGARGIRTFKLPNPMYY 211

This family proteins includes acid phosphatases and a number of vegetative storage proteins. Length = 213

>gnl|CDD|130741 TIGR01680, Veg_Stor_Prot, vegetative storage protein

 Score =  165 bits (418), Expect = 4e-50
 Identities = 78/211 (36%), Positives = 127/211 (60%), Gaps = 6/211 (2%)

Query: 43  CESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGD 102
           C SWR+ VE +NI  FE +P+EC+D   +Y+   QY++DS+   ++   +      L   
Sbjct: 43  CASWRLAVEAHNIFGFETIPEECVDATAEYIEGEQYRSDSKTVNQQAYFFAR---DLEVH 99

Query: 103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSW-EAWMKESKAPALEHTLNLFHEIKN 161
            KD ++F++D T LS IPY+KKHG+G E+ ++  + E ++ + +APAL  TL  ++++ +
Sbjct: 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS 159

Query: 162 RGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED-EYKKVQQYKAQVRKRLVK 220
            G KI  +S R +  ++ T  NL   GYH W  L L+  +D   +   +YK   R +L++
Sbjct: 160 LGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQ 219

Query: 221 EGYRIWGVVGDQWSSFEGLPKPK-RTFKLPN 250
           EGY I G++GDQW+  +G  +   R+FKLPN
Sbjct: 220 EGYNIVGIIGDQWNDLKGEHRGAIRSFKLPN 250

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. Length = 275

>gnl|CDD|233452 TIGR01533, lipo_e_P4, 5'-nucleotidase, lipoprotein e(P4) family

 Score = 69.1 bits (169), Expect = 8e-14
 Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 6/165 (3%)

Query: 72  YMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGER 131
              S++YKA   +A    K+ L        D K A + D+D+T+L   PY        + 
Sbjct: 43  MQRSAEYKALYLQAYNLAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKP 102

Query: 132 LNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG 191
            +  +W+ W++ ++A  +   L+  +   ++GVKIF VS+R E  ++ T+ NL   G+  
Sbjct: 103 FDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQ 162

Query: 192 WASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSF 236
                L   +D+  K      + R++ V++ Y I  + GD    F
Sbjct: 163 ADEEHLLLKKDKSSK------ESRRQKVQKDYEIVLLFGDNLLDF 201

This model represents a set of bacterial lipoproteins belonging to a larger acid phosphatase family (pfam03767), which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles [Transport and binding proteins, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]. Length = 266

>gnl|CDD|225305 COG2503, COG2503, Predicted secreted acid phosphatase [General function prediction only]

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 41/203 (20%)

Query: 83  QRAAEEVKLYLSGCCS----------LAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERL 132
           Q++AE   LYL    S               K A + D+D+T+L    Y        +  
Sbjct: 48  QQSAEYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDNSAYQGYQVLNNKGF 107

Query: 133 NASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSR-RESLRSYTVDNLIHVGYHG 191
              +W+ W++  K+ A+   +   + + + G KIF +S+R +E+ +  T++NL       
Sbjct: 108 TPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL------- 160

Query: 192 WASLELRGLEDE---YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSF----EGLPKPKR 244
             S  L  + +     KK ++ K  VR++ V++ Y+I  +VGD    F        + +R
Sbjct: 161 -KSEGLPQVLESHLLLKKDKKSKE-VRRQAVEKDYKIVMLVGDNLDDFGDNAYKKAEAER 218

Query: 245 TFK--------------LPNSMY 253
                            LPNSMY
Sbjct: 219 RALVKQNQKKFGKKFIILPNSMY 241

Length = 274

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	256
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	100.0
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	100.0
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	100.0
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	100.0
COG2503	274	Predicted secreted acid phosphatase [General funct	100.0
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.89
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.82
COG0546	220	Gph Predicted phosphatases [General function predi	99.64
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.61
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.6
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.59
PRK11587	218	putative phosphatase; Provisional	99.59
PRK13288	214	pyrophosphatase PpaX; Provisional	99.59
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.58
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.57
PLN02575	381	haloacid dehalogenase-like hydrolase	99.56
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.56
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.56
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.55
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.55
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.54
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.54
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.54
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.53
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.53
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.51
PHA02530	300	pseT polynucleotide kinase; Provisional	99.51
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.51
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.5
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.49
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.49
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.49
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.48
PLN02940	382	riboflavin kinase	99.47
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.47
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.46
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.46
PRK09449	224	dUMP phosphatase; Provisional	99.44
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.44
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.44
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.43
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.41
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.41
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.4
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.39
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.39
PRK06769	173	hypothetical protein; Validated	99.38
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.37
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.36
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.36
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.36
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.35
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.35
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.33
PHA02597	197	30.2 hypothetical protein; Provisional	99.32
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.32
PLN02954	224	phosphoserine phosphatase	99.3
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	99.29
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.29
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.24
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.24
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.23
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.22
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.2
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	99.2
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.16
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.13
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.11
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.1
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.1
COG3700	237	AphA Acid phosphatase (class B) [General function	99.09
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	99.09
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.08
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	99.08
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.07
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.07
PLN02811	220	hydrolase	99.07
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.03
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.99
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.97
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.93
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	98.92
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.91
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.9
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.9
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.87
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	98.84
PLN02645	311	phosphoglycolate phosphatase	98.84
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.83
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.79
COG0241	181	HisB Histidinol phosphatase and related phosphatas	98.79
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.76
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	98.76
PRK10444	248	UMP phosphatase; Provisional	98.75
PRK08238	479	hypothetical protein; Validated	98.74
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	98.73
PRK11590	211	hypothetical protein; Provisional	98.7
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.7
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	98.66
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	98.64
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.64
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	98.6
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	98.59
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	98.57
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.49
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	98.48
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.43
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	98.42
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.41
PRK10513	270	sugar phosphate phosphatase; Provisional	98.41
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	98.41
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.4
PRK10976	266	putative hydrolase; Provisional	98.4
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	98.4
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.37
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.37
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.31
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	98.31
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.28
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	98.28
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	98.27
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.24
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	98.24
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	98.23
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	98.23
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	98.19
PTZ00174	247	phosphomannomutase; Provisional	98.18
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.17
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	98.17
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	98.16
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	98.15
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.1
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.09
PLN02887	580	hydrolase family protein	98.09
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	98.06
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.04
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.01
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	97.97
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	97.96
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	97.95
PTZ00445	219	p36-lilke protein; Provisional	97.93
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	97.9
COG4850	373	Uncharacterized conserved protein [Function unknow	97.89
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	97.86
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	97.78
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.75
KOG2116	738	consensus Protein involved in plasmid maintenance/	97.74
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	97.73
PLN02423	245	phosphomannomutase	97.73
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	97.71
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	97.67
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	97.64
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	97.55
PLN03017	366	trehalose-phosphatase	97.54
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	97.54
COG4996	164	Predicted phosphatase [General function prediction	97.52
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.49
COG4359	220	Uncharacterized conserved protein [Function unknow	97.43
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	97.35
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.32
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	97.27
PLN02151	354	trehalose-phosphatase	97.18
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	96.99
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	96.96
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.93
COG5663	194	Uncharacterized conserved protein [Function unknow	96.89
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	96.84
PLN02382	413	probable sucrose-phosphatase	96.83
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	96.8
KOG1618	389	consensus Predicted phosphatase [General function	96.79
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	96.77
PLN02580	384	trehalose-phosphatase	96.76
PRK10671	834	copA copper exporting ATPase; Provisional	96.71
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.61
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	96.57
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	96.55
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	96.54
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	96.53
PRK14010	673	potassium-transporting ATPase subunit B; Provision	96.49
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	96.31
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	96.26
PRK01122	679	potassium-transporting ATPase subunit B; Provision	96.2
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	96.19
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	96.13
COG4087	152	Soluble P-type ATPase [General function prediction	96.11
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	96.1
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	96.06
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	96.04
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	96.01
PRK15122	903	magnesium-transporting ATPase; Provisional	95.93
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	95.89
COG4229	229	Predicted enolase-phosphatase [Energy production a	95.54
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	95.11
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	95.01
PLN02645	311	phosphoglycolate phosphatase	94.95
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	94.94
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	94.69
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	94.58
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	94.38
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	94.28
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	94.06
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	93.98
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	93.92
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	93.91
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	93.61
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	93.24
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	92.77
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	92.6
PLN02177	497	glycerol-3-phosphate acyltransferase	91.47
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	90.43
PF09949	100	DUF2183: Uncharacterized conserved protein (DUF218	90.24
PF10307	197	DUF2410: Hypothetical protein (DUF2410); InterPro:	87.54
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	86.96
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	86.49
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	86.41
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	86.22
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	85.46
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	85.14
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	85.13
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	85.04
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	82.63
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	82.63
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	82.52
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	82.33
cd06591	319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	80.85

>TIGR01675 plant-AP plant acid phosphatase

Probab=100.00  E-value=9.8e-75  Score=500.51  Aligned_cols=219  Identities=54%  Similarity=1.003  Sum_probs=212.6

Q ss_pred             ccccccccceeeeeeecCccCccccchhhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCcc
Q 025203           37 DSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLL  116 (256)
Q Consensus        37 ~~~~~~c~s~~~~~e~nn~~~~~~vP~~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTll  116 (256)
                      +....||.||||+||+||+++|+|||++|++||++||+||||++|++++.++|..|++++ .+++++++|||||||||+|
T Consensus        11 ~~~~~~c~swr~~ve~~n~~~~~~vp~~c~~~v~~Y~~~~~Y~~D~~~v~~~a~~y~~~~-~~~~dg~~A~V~DIDET~L   89 (229)
T TIGR01675        11 SIDYAYCRSWRLGVETNNIRDWDTVPAECKDYVEDYMTSKQYKRDVKRVVDEAYFYAKSL-ALSGDGMDAWIFDVDDTLL   89 (229)
T ss_pred             cCCcCcchhhhhhhhhccccccccCcHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHh-hccCCCCcEEEEccccccc
Confidence            456899999999999999999999999999999999999999999999999999999999 7888999999999999999


Q ss_pred             CChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEE
Q 025203          117 STIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLE  196 (256)
Q Consensus       117 dn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~li  196 (256)
                      ||.||++.++||+++|++++|++|+.++++|++|++++++++|+++|++|+|+|||++.+|+.|.+||+++||++|++++
T Consensus        90 sN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~Li  169 (229)
T TIGR01675        90 SNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLI  169 (229)
T ss_pred             cCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCCCCCcEEEecCCCCCCC
Q 025203          197 LRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS  256 (256)
Q Consensus       197 lr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g~r~fklPnp~Y~~~  256 (256)
                      ||+.++..+++..||+++|++++++||+|+++|||||+||.|+++|.|+|||||||||||
T Consensus       170 LR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~G~~~~~RtFKLPNPmYyi~  229 (229)
T TIGR01675       170 LRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLLGSPPGRRTFKLPNPMYYVP  229 (229)
T ss_pred             ecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhcCCCccCceeeCCCCcccCC
Confidence            999777777888999999999999999999999999999999999999999999999997

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=100.00  E-value=3.3e-70  Score=479.32  Aligned_cols=215  Identities=35%  Similarity=0.739  Sum_probs=203.6

Q ss_pred             ccccccccceeeeeeecCccCccccchhhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCcc
Q 025203           37 DSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLL  116 (256)
Q Consensus        37 ~~~~~~c~s~~~~~e~nn~~~~~~vP~~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTll  116 (256)
                      .....||.|||++||+||+++|+|||++|++||++||+||||++|++++.++|..|+.++ ..  ++++|||||||||+|
T Consensus        37 ~~~~~~c~swr~~vE~~n~~~w~~vP~~C~~~v~~Y~~ggqY~~D~~~v~~~a~~y~~~~-~~--~~~dA~V~DIDET~L  113 (275)
T TIGR01680        37 RDPEVKCASWRLAVEAHNIFGFETIPEECVDATAEYIEGEQYRSDSKTVNQQAYFFARDL-EV--HEKDTFLFNIDGTAL  113 (275)
T ss_pred             cCCCCcccceeeeeeecccCCcccCcHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhC-cC--CCCCEEEEECccccc
Confidence            456889999999999999999999999999999999999999999999999999999877 54  468999999999999


Q ss_pred             CChHHHHHhccCCCCCCHHHHH-HHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceE
Q 025203          117 STIPYFKKHGFGGERLNASSWE-AWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASL  195 (256)
Q Consensus       117 dn~~~~~~~~~g~~~~~~~~~~-~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~l  195 (256)
                      ||.||+..++||+++|+++.|+ +|+..+++|++|++++|+++++++|++|+|||||++.+|++|++||+++||++|+++
T Consensus       114 sN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~L  193 (275)
T TIGR01680       114 SNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKL  193 (275)
T ss_pred             cCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCccee
Confidence            9999999999999999999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCC-CCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCCCC-CcEEEecCCCCC
Q 025203          196 ELRGLED-EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKP-KRTFKLPNSMYY  254 (256)
Q Consensus       196 ilr~~~~-~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g-~r~fklPnp~Y~  254 (256)
                      +||+.++ ..+++..||+..|++++++||+|+++|||||+||.|++.| .|+||||||||-
T Consensus       194 iLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~G~~~g~~RtFKLPNP~~~  254 (275)
T TIGR01680       194 ILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLKGEHRGAIRSFKLPNPCTT  254 (275)
T ss_pred             eecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhccCCCccCcceecCCCcccc
Confidence            9998754 5567889999999999999999999999999999999886 799999999774

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=100.00  E-value=1.1e-54  Score=378.28  Aligned_cols=214  Identities=38%  Similarity=0.695  Sum_probs=184.2

Q ss_pred             ccccccccceeeeeeecCccCccccchhhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCcc
Q 025203           37 DSLKTYCESWRINVELNNIREFEVVPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLL  116 (256)
Q Consensus        37 ~~~~~~c~s~~~~~e~nn~~~~~~vP~~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTll  116 (256)
                      .....+|.||+++||+|| .+|.+  ++|++++.. |+++||.+|+..++.+|..|+.+. ...+++++|||||||||+|
T Consensus        10 ~~~~~~c~s~~~~~e~~~-~~~~~--~~~~~~~~~-~~~~q~~~e~~a~~~~a~~~a~~~-~~~~~~~~avv~DIDeTvL   84 (229)
T PF03767_consen   10 STAALYCASWRLAVETNN-ANWTV--AECVEYVAD-VTWGQYSAEYKALVDQAYNYAKSR-LDEADKPPAVVFDIDETVL   84 (229)
T ss_dssp             --------TCCSSHHHHH-----H--HHHHHTTHH-HHHHHHEHHHHHHHHHHHHHHHHH-HHHHTSEEEEEEESBTTTE
T ss_pred             hHHHhhhhhccchhhhcc-hHHHH--HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh-HhccCCCcEEEEECCcccc
Confidence            457889999999999999 99975  999999999 999999999999999999999988 5555889999999999999


Q ss_pred             CChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEE
Q 025203          117 STIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLE  196 (256)
Q Consensus       117 dn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~li  196 (256)
                      ||.+|+..+.+++..|+++.|++|+..+.++++||+++|+++++++|++|+|||||++.+|+.|++||+++||+.|++++
T Consensus        85 sn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~  164 (229)
T PF03767_consen   85 SNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLI  164 (229)
T ss_dssp             EHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGE
T ss_pred             cCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCCC-CCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC----CCCCCcEEEecCCCCCC
Q 025203          197 LRGLED-EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG----LPKPKRTFKLPNSMYYL  255 (256)
Q Consensus       197 lr~~~~-~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g----a~~g~r~fklPnp~Y~~  255 (256)
                      |++..+ ..+++..||++.|+.+++.||+|+++||||++||.+    +..|.|+|+|||||||+
T Consensus       165 lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~~~~~~~~~~r~f~lPNp~Yg~  228 (229)
T PF03767_consen  165 LRPDKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSGAKTAGARAERWFKLPNPMYGS  228 (229)
T ss_dssp             EEEESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHCTHHHHHHHTTEEE-TTSSSSH
T ss_pred             cccccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhcccccccccceEEEcCCCCCCC
Confidence            999876 555778999999999999999999999999999999    55589999999999985

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=100.00  E-value=3.7e-40  Score=291.89  Aligned_cols=183  Identities=26%  Similarity=0.406  Sum_probs=162.1

Q ss_pred             hhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHh
Q 025203           64 ECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKE  143 (256)
Q Consensus        64 ~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~  143 (256)
                      +-...|.||++|+||++++.|+++.|+.+++++.+...++++|||||||||+|||+||+..+.+++.+|+++.|++|+..
T Consensus        35 ~~~~~~~w~q~S~Ey~al~~q~~n~A~~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~  114 (266)
T TIGR01533        35 QNTMSVAWMQRSAEYKALYLQAYNLAKMRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQA  114 (266)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHc
Confidence            44677999999999999999999999999998744445778999999999999999999998899999999999999999


Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc--ceEEEecCCCCCchhhhhhHHHHHHHHhc
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW--ASLELRGLEDEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~--~~lilr~~~~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ..++++||+.+++++|+++|++++|+|||++..++.|.++|+++|++.+  +++++++.. .      .|+..|+.+. .
T Consensus       115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-~------~K~~rr~~I~-~  186 (266)
T TIGR01533       115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-S------SKESRRQKVQ-K  186 (266)
T ss_pred             CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-C------CcHHHHHHHH-h
Confidence            9999999999999999999999999999999999999999999999865  578888532 2      3455666664 5


Q ss_pred             CCcEEEEEcCCccccCCCC-------------------CCCcEEEecCCCCC
Q 025203          222 GYRIWGVVGDQWSSFEGLP-------------------KPKRTFKLPNSMYY  254 (256)
Q Consensus       222 g~~i~~~iGD~~sDl~ga~-------------------~g~r~fklPnp~Y~  254 (256)
                      +|+|+++|||+++||.+..                   +|.++|.||||||+
T Consensus       187 ~y~Ivl~vGD~~~Df~~~~~~~~~~~~r~~~v~~~~~~fG~~~i~lPNp~YG  238 (266)
T TIGR01533       187 DYEIVLLFGDNLLDFDDFFYKDKESQDRQALVLQNQEKFGKKFIILPNPMYG  238 (266)
T ss_pred             cCCEEEEECCCHHHhhhhhccCcchHHHHHHHHHHHHHhCCCeEEecCCCCc
Confidence            8999999999999997631                   68999999999996

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=100.00  E-value=1.2e-35  Score=253.75  Aligned_cols=182  Identities=26%  Similarity=0.408  Sum_probs=159.3

Q ss_pred             hHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhc
Q 025203           65 CIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKES  144 (256)
Q Consensus        65 c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~  144 (256)
                      -...|.||+.|+||++...|+++.|+.-+++..++..++++|||+|||||+|||+||.......+.+|+|++|++||++.
T Consensus        40 ~~~~v~w~Q~s~E~~AL~~Q~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~  119 (274)
T COG2503          40 NTMSVNWYQQSAEYQALYLQAYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAK  119 (274)
T ss_pred             hhhhHHHhhhhHHHHHHHHHHhhhHHHHHHhhhccccCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhc
Confidence            34569999999999999999999999999954377777888999999999999999999888889999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCccc-HHHHHHHHHhcCCCCc--ceEEEecCCCCCchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-RSYTVDNLIHVGYHGW--ASLELRGLEDEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~-r~~T~~~L~~~G~~~~--~~lilr~~~~~~kp~~~~K~~~r~~l~~~  221 (256)
                      .+.++||+.+|+++..++|.+|+|+|||.... ...|+++|++.|+++.  .++++..+. +      .| +.|++..+.
T Consensus       120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~-k------~K-e~R~~~v~k  191 (274)
T COG2503         120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDK-K------SK-EVRRQAVEK  191 (274)
T ss_pred             ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCC-C------cH-HHHHHHHhh
Confidence            99999999999999999999999999999766 8899999999999986  466766322 1      23 345555567


Q ss_pred             CCcEEEEEcCCccccCCCC------------------CCCcEEEecCCCCC
Q 025203          222 GYRIWGVVGDQWSSFEGLP------------------KPKRTFKLPNSMYY  254 (256)
Q Consensus       222 g~~i~~~iGD~~sDl~ga~------------------~g~r~fklPnp~Y~  254 (256)
                      +|.|++.|||++.||....                  +|.++|.||||||.
T Consensus       192 ~~~iVm~vGDNl~DF~d~~~k~~~~eR~Alv~~~~~~FGk~~Ii~pN~~YG  242 (274)
T COG2503         192 DYKIVMLVGDNLDDFGDNAYKKAEAERRALVKQNQKKFGKKFIILPNSMYG  242 (274)
T ss_pred             ccceeeEecCchhhhcchhhhhhhHHHHHHHHHHHHHhCceEEEecCCccC
Confidence            9999999999999997642                  79999999999996

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.89  E-value=7.3e-23  Score=178.90  Aligned_cols=144  Identities=22%  Similarity=0.242  Sum_probs=105.8

Q ss_pred             CCCCcEEEEecCCCccCChHH--HHHhccC--CCCC--CHHHHHHHHHh--cCCcchHHHHHHHHHHHHcCCeEEEEeCC
Q 025203          101 GDGKDAWIFDVDDTLLSTIPY--FKKHGFG--GERL--NASSWEAWMKE--SKAPALEHTLNLFHEIKNRGVKIFLVSSR  172 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~--~~~~~~g--~~~~--~~~~~~~wv~~--~~~~~~pg~~ell~~L~~~G~~i~ivTnR  172 (256)
                      +.+|.+|+||||||+|||+||  +..+.|+  ...|  +.+.|+.|.+.  ..+.++||++++|++|+++|++|+|||||
T Consensus        60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR  139 (237)
T PRK11009         60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR  139 (237)
T ss_pred             CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence            444559999999999999885  4444553  3456  34455555543  45778899999999999999999999999


Q ss_pred             CcccHHHHHHHHHh-cCC--CCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCC-CCCCc---E
Q 025203          173 RESLRSYTVDNLIH-VGY--HGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL-PKPKR---T  245 (256)
Q Consensus       173 ~~~~r~~T~~~L~~-~G~--~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga-~~g~r---~  245 (256)
                      ++..++.|.++|.+ +|+  ..++.+++.++.. .|+.+      +..+++  +.++++|||+++|++++ .+|.+   +
T Consensus       140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~K------~~~l~~--~~i~I~IGDs~~Di~aA~~AGi~~I~v  210 (237)
T PRK11009        140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYTK------TQWLKK--KNIRIFYGDSDNDITAAREAGARGIRI  210 (237)
T ss_pred             CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCCH------HHHHHh--cCCeEEEcCCHHHHHHHHHcCCcEEEE
Confidence            98878889999886 999  4566777776542 33322      234444  34688999999999987 35554   5


Q ss_pred             EEecCCCC
Q 025203          246 FKLPNSMY  253 (256)
Q Consensus       246 fklPnp~Y  253 (256)
                      +.-||++|
T Consensus       211 ~~G~~~~~  218 (237)
T PRK11009        211 LRAANSTY  218 (237)
T ss_pred             ecCCCCCC
Confidence            56699998

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.82  E-value=1.5e-19  Score=158.11  Aligned_cols=138  Identities=20%  Similarity=0.239  Sum_probs=102.2

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCC---------HHHHHHHHHhcCC--cchHHHHHHHHHHHHcCCeEEE
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLN---------ASSWEAWMKESKA--PALEHTLNLFHEIKNRGVKIFL  168 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~---------~~~~~~wv~~~~~--~~~pg~~ell~~L~~~G~~i~i  168 (256)
                      ++.+|.+|+|||||||+||+|++ .  +|-..++         +..|+.|......  .+.+++.++|++++++|++++|
T Consensus        59 ~~~~p~aViFDlDgTLlDSs~~~-~--~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~i  135 (237)
T TIGR01672        59 EGRPPIAVSFDIDDTVLFSSPGF-W--RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFF  135 (237)
T ss_pred             CCCCCeEEEEeCCCccccCcHHH-h--CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEE
Confidence            44455699999999999999987 2  3433333         3678999876544  5666699999999999999999


Q ss_pred             EeCCCcccHHHHHHHHH-hcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCC-CCCCcE
Q 025203          169 VSSRRESLRSYTVDNLI-HVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL-PKPKRT  245 (256)
Q Consensus       169 vTnR~~~~r~~T~~~L~-~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga-~~g~r~  245 (256)
                      ||||.+..++.+.++|. ++|++.++..++.++. ...||++      +..+++  +.++++|||+.+||.++ .+|.++
T Consensus       136 VTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~------~~~l~~--~~i~i~vGDs~~DI~aAk~AGi~~  207 (237)
T TIGR01672       136 VTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTK------TQWIQD--KNIRIHYGDSDNDITAAKEAGARG  207 (237)
T ss_pred             EeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCH------HHHHHh--CCCeEEEeCCHHHHHHHHHCCCCE
Confidence            99997654455566654 6999988888877654 2334432      123443  44689999999999887 578888


Q ss_pred             EEe
Q 025203          246 FKL  248 (256)
Q Consensus       246 fkl  248 (256)
                      +.+
T Consensus       208 I~V  210 (237)
T TIGR01672       208 IRI  210 (237)
T ss_pred             EEE
Confidence            776

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.64  E-value=1.4e-15  Score=131.45  Aligned_cols=140  Identities=17%  Similarity=0.121  Sum_probs=101.4

Q ss_pred             CcEEEEecCCCccCChHHHHHh------ccCCCCCCH----------------------------HHHHHHHH----h--
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH------GFGGERLNA----------------------------SSWEAWMK----E--  143 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~------~~g~~~~~~----------------------------~~~~~wv~----~--  143 (256)
                      .++|+||+||||+|+.+.+...      .+|-.+.+.                            +.+..|..    .  
T Consensus         4 ~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (220)
T COG0546           4 IKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAYA   83 (220)
T ss_pred             CCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHHHH
Confidence            5799999999999999876652      122111110                            11222211    0  


Q ss_pred             cC--CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEe-cCCCCCchhhhhhHHHHHHHHh
Q 025203          144 SK--APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELR-GLEDEYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       144 ~~--~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr-~~~~~~kp~~~~K~~~r~~l~~  220 (256)
                      ..  ..++||+.++|..|+++|++++++||+++..   +...|+++|+..++..+.+ ......||+|..   +...+.+
T Consensus        84 ~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~---~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~---l~~~~~~  157 (220)
T COG0546          84 ELLESRLFPGVKELLAALKSAGYKLGIVTNKPERE---LDILLKALGLADYFDVIVGGDDVPPPKPDPEP---LLLLLEK  157 (220)
T ss_pred             hhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHH---HHHHHHHhCCccccceEEcCCCCCCCCcCHHH---HHHHHHH
Confidence            12  5799999999999999999999999998765   7788888999999888887 344667787743   4455555


Q ss_pred             cCCc--EEEEEcCCccccCCCC-CCCcEEEec
Q 025203          221 EGYR--IWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       221 ~g~~--i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                      .|.+  .+++|||+..|+++|+ +|..++-+-
T Consensus       158 ~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~  189 (220)
T COG0546         158 LGLDPEEALMVGDSLNDILAAKAAGVPAVGVT  189 (220)
T ss_pred             hCCChhheEEECCCHHHHHHHHHcCCCEEEEE
Confidence            6666  6899999999999984 677766553

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.61  E-value=3.1e-15  Score=129.76  Aligned_cols=102  Identities=17%  Similarity=0.114  Sum_probs=76.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++|+.|+++|++++++||.+...   ....|+++|+..++..++.++ ....||++...   ...+++.|.
T Consensus        91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~---~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~---~~~~~~~~~  164 (224)
T PRK14988         91 RAVLREDTVPFLEALKASGKRRILLTNAHPHN---LAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLW---QAVAEHTGL  164 (224)
T ss_pred             cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHH---HHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHH---HHHHHHcCC
Confidence            36789999999999999999999999976433   455678889877765555544 35578877433   334445555


Q ss_pred             c--EEEEEcCCccccCCC-CCCCcE-EEecCCC
Q 025203          224 R--IWGVVGDQWSSFEGL-PKPKRT-FKLPNSM  252 (256)
Q Consensus       224 ~--i~~~iGD~~sDl~ga-~~g~r~-fklPnp~  252 (256)
                      .  .+++|||+.+|+++| .+|.++ +.++||-
T Consensus       165 ~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~  197 (224)
T PRK14988        165 KAERTLFIDDSEPILDAAAQFGIRYCLGVTNPD  197 (224)
T ss_pred             ChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence            4  499999999999988 478885 6677763

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.60  E-value=9.5e-15  Score=126.87  Aligned_cols=139  Identities=16%  Similarity=0.154  Sum_probs=98.2

Q ss_pred             CcEEEEecCCCccCChHHHHHh------ccCCCCCC------------------------H-------HHHHHHHHh---
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH------GFGGERLN------------------------A-------SSWEAWMKE---  143 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~------~~g~~~~~------------------------~-------~~~~~wv~~---  143 (256)
                      +++||||+||||+|+.+.+...      .+|...++                        .       +.|.+.+..   
T Consensus        12 ~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (229)
T PRK13226         12 PRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEALIG   91 (229)
T ss_pred             CCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhhh
Confidence            5799999999999998776542      13322111                        0       011111111   


Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++++.|+++|++++++||++..   .....|+++|+..++..+...+. ...||++...   .+.+++.|
T Consensus        92 ~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~---~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~---~~~~~~l~  165 (229)
T PRK13226         92 TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEY---LARLILPQLGWEQRCAVLIGGDTLAERKPHPLPL---LVAAERIG  165 (229)
T ss_pred             hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHH---HHHHHHHHcCchhcccEEEecCcCCCCCCCHHHH---HHHHHHhC
Confidence            34688999999999999999999999998753   35667888999877777666553 4568877543   33444445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEe
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      .  +.+++|||+.+|+.++ .+|.+++.+
T Consensus       166 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v  194 (229)
T PRK13226        166 VAPTDCVYVGDDERDILAARAAGMPSVAA  194 (229)
T ss_pred             CChhhEEEeCCCHHHHHHHHHCCCcEEEE
Confidence            3  4599999999999988 478888766

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.59  E-value=9.7e-15  Score=128.41  Aligned_cols=101  Identities=17%  Similarity=0.048  Sum_probs=79.1

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++|++|+++|++++++||++...   +...|+++|+..|+..++.+++ ...||++...   .+.++..|
T Consensus       105 ~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~---~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~---~~a~~~~~  178 (248)
T PLN02770        105 EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPREN---AELMISLLGLSDFFQAVIIGSECEHAKPHPDPY---LKALEVLK  178 (248)
T ss_pred             hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHHcCChhhCcEEEecCcCCCCCCChHHH---HHHHHHhC
Confidence            357899999999999999999999999997543   6788899999888776666554 5678887443   34444445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .  +.+++|||+..|+++| .+|.+++.+.+
T Consensus       179 ~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~  209 (248)
T PLN02770        179 VSKDHTFVFEDSVSGIKAGVAAGMPVVGLTT  209 (248)
T ss_pred             CChhHEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence            4  4599999999999988 47999887743

>PRK11587 putative phosphatase; Provisional

Probab=99.59  E-value=1.2e-14  Score=125.05  Aligned_cols=142  Identities=14%  Similarity=0.133  Sum_probs=95.4

Q ss_pred             CcEEEEecCCCccCChHHHHHh------ccC-----------CC-----------CCCH----HHHHHHH---H--hcCC
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH------GFG-----------GE-----------RLNA----SSWEAWM---K--ESKA  146 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~------~~g-----------~~-----------~~~~----~~~~~wv---~--~~~~  146 (256)
                      .++||||+||||+|+.+.+...      .+|           +.           ..+.    +.|.++.   .  ....
T Consensus         3 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (218)
T PRK11587          3 CKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMAGASEAEIQAEFTRLEQIEATDTEGI   82 (218)
T ss_pred             CCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhccCCcHHHHHHHHHHHHHHHhhhcCc
Confidence            5799999999999998766331      112           10           0111    1222211   1  2456


Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--c
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--R  224 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~  224 (256)
                      +++||+.++|+.|+++|++++++||++...   +...++..|+..++.++..++....||++...   ...++..|.  +
T Consensus        83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~---~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~---~~~~~~~g~~p~  156 (218)
T PRK11587         83 TALPGAIALLNHLNKLGIPWAIVTSGSVPV---ASARHKAAGLPAPEVFVTAERVKRGKPEPDAY---LLGAQLLGLAPQ  156 (218)
T ss_pred             eeCcCHHHHHHHHHHcCCcEEEEcCCCchH---HHHHHHhcCCCCccEEEEHHHhcCCCCCcHHH---HHHHHHcCCCcc
Confidence            899999999999999999999999987543   46667778886444433333334567777432   344444554  5


Q ss_pred             EEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          225 IWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       225 i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .+++|||+..|+++| .+|.+++.+.++
T Consensus       157 ~~l~igDs~~di~aA~~aG~~~i~v~~~  184 (218)
T PRK11587        157 ECVVVEDAPAGVLSGLAAGCHVIAVNAP  184 (218)
T ss_pred             cEEEEecchhhhHHHHHCCCEEEEECCC
Confidence            699999999999988 478888888643

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.59  E-value=1.1e-14  Score=124.70  Aligned_cols=140  Identities=16%  Similarity=0.148  Sum_probs=97.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhc------cCCCC--------------------CCHHHHHHH-------HH---hcCCc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHG------FGGER--------------------LNASSWEAW-------MK---ESKAP  147 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~------~g~~~--------------------~~~~~~~~w-------v~---~~~~~  147 (256)
                      .++|+||+||||+|+.+.+....      ++...                    +++..+.+.       ..   ....+
T Consensus         3 ~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (214)
T PRK13288          3 INTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHHDELVT   82 (214)
T ss_pred             ccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            57999999999999987654321      22111                    111112111       11   13467


Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC--c
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY--R  224 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~--~  224 (256)
                      ++||+.++|+.|+++|++++++||+.+.   .+...|+..|+..++..++..++ ...||++...   .+.+.+.|.  .
T Consensus        83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~---~~~~~~~~~~~~  156 (214)
T PRK13288         83 EYETVYETLKTLKKQGYKLGIVTTKMRD---TVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPV---LKALELLGAKPE  156 (214)
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCChhceeEEEecCcCCCCCCCcHHH---HHHHHHcCCCHH
Confidence            8999999999999999999999999754   36778899999988777776654 4567766433   344444454  3


Q ss_pred             EEEEEcCCccccCCC-CCCCcEEEec
Q 025203          225 IWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       225 i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      .+++|||+.+|++++ .+|.+++.+.
T Consensus       157 ~~~~iGDs~~Di~aa~~aG~~~i~v~  182 (214)
T PRK13288        157 EALMVGDNHHDILAGKNAGTKTAGVA  182 (214)
T ss_pred             HEEEECCCHHHHHHHHHCCCeEEEEc
Confidence            589999999999998 4788877663

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.58  E-value=1.4e-14  Score=128.50  Aligned_cols=101  Identities=16%  Similarity=0.109  Sum_probs=79.4

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++|+.|+++|++++++||++...   +...|+++|+..++..++.+++ ...||++...   ...+++.|
T Consensus       106 ~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~---~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~---~~a~~~l~  179 (260)
T PLN03243        106 GLYRLRPGSREFVQALKKHEIPIAVASTRPRRY---LERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMF---MYAAERLG  179 (260)
T ss_pred             cCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHH---HHHHHHHcCCHhhCcEEEecccCCCCCCCHHHH---HHHHHHhC
Confidence            356789999999999999999999999997543   6778888999887766666654 4578887433   34455556


Q ss_pred             Cc--EEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          223 YR--IWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       223 ~~--i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      ..  .+++|||+.+|+++|. +|.+++.+.+
T Consensus       180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g  210 (260)
T PLN03243        180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAG  210 (260)
T ss_pred             CChHHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence            54  4999999999999984 7999988864

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.57  E-value=1.5e-14  Score=125.42  Aligned_cols=142  Identities=18%  Similarity=0.214  Sum_probs=104.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhc------cCCC----------------------------C-CCHHHHHHHH------H
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHG------FGGE----------------------------R-LNASSWEAWM------K  142 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~------~g~~----------------------------~-~~~~~~~~wv------~  142 (256)
                      .+|+|||+||||+|+.+.+.+.+      +|..                            . .....-..+.      .
T Consensus         2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (221)
T COG0637           2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEALE   81 (221)
T ss_pred             CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHhh
Confidence            57999999999999988876642      2211                            0 1111111111      1


Q ss_pred             hcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhc
Q 025203          143 ESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       143 ~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ....+++||+.++++.|+++|++++++|+.+.   ..+...|..+|+..++..++.+ +..++||+|...   +.+.+..
T Consensus        82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~---~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~y---L~Aa~~L  155 (221)
T COG0637          82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPR---RAAERVLARLGLLDYFDVIVTADDVARGKPAPDIY---LLAAERL  155 (221)
T ss_pred             hcCCCCCccHHHHHHHHHhcCCcEEEecCChH---HHHHHHHHHccChhhcchhccHHHHhcCCCCCHHH---HHHHHHc
Confidence            24579999999999999999999999999864   3478889999988887665554 446778988433   4555665


Q ss_pred             CCc--EEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          222 GYR--IWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       222 g~~--i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      |..  .|+.|+|++.+++++ .+|+++|.+|++
T Consensus       156 gv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~  188 (221)
T COG0637         156 GVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAG  188 (221)
T ss_pred             CCChHHeEEEecchhHHHHHHHCCCEEEEecCC
Confidence            654  599999999999998 489999999984

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.56  E-value=1.9e-14  Score=133.52  Aligned_cols=100  Identities=12%  Similarity=0.066  Sum_probs=79.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++|+.|+++|++++++||++..   .+...|+++|+..|+..++..++ ...||++...   ...++..|.
T Consensus       214 ~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~---~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peif---l~A~~~lgl  287 (381)
T PLN02575        214 IYRLRTGSQEFVNVLMNYKIPMALVSTRPRK---TLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMF---IYAAQLLNF  287 (381)
T ss_pred             CCCcCcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHH---HHHHHHcCC
Confidence            4678999999999999999999999999754   47788899999888777776655 4568877443   334444554


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                        ..+++|||+.+|+++|+ +|.+++-+.+
T Consensus       288 ~Peecl~IGDS~~DIeAAk~AGm~~IgV~~  317 (381)
T PLN02575        288 IPERCIVFGNSNQTVEAAHDARMKCVAVAS  317 (381)
T ss_pred             CcccEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence              45999999999999984 7999988864

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.56  E-value=1.8e-14  Score=123.60  Aligned_cols=100  Identities=13%  Similarity=0.124  Sum_probs=76.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCC--CcceEEEecCC-CCCchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYH--GWASLELRGLE-DEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~--~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ..+++||+.++++.|+++|++++++||+....   ....|+++|+.  .++..+...++ ...||++...   ...+++.
T Consensus        85 ~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~---~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~---~~a~~~~  158 (220)
T TIGR03351        85 PPVALPGAEEAFRSLRSSGIKVALTTGFDRDT---AERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLI---LRAMELT  158 (220)
T ss_pred             CCccCCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHH---HHHHHHc
Confidence            45899999999999999999999999998654   56777888887  66665655544 4567877433   3444555


Q ss_pred             CC---cEEEEEcCCccccCCC-CCCCcE-EEecC
Q 025203          222 GY---RIWGVVGDQWSSFEGL-PKPKRT-FKLPN  250 (256)
Q Consensus       222 g~---~i~~~iGD~~sDl~ga-~~g~r~-fklPn  250 (256)
                      |.   +.+++|||+++|++++ .+|.++ +.++.
T Consensus       159 ~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~  192 (220)
T TIGR03351       159 GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLT  192 (220)
T ss_pred             CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEec
Confidence            54   4599999999999998 589998 77754

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.56  E-value=8.8e-15  Score=128.56  Aligned_cols=102  Identities=14%  Similarity=0.098  Sum_probs=78.1

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEEEecCC-CCCchhhhhhHHHHHHHHhc
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLELRGLE-DEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~lilr~~~-~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ....++||+.++|+.|+++|++++++||++...   +...|+++|+..++ ..++.+++ ...||++...   .+.+++.
T Consensus        96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~---~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~---~~a~~~l  169 (253)
T TIGR01422        96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREM---MDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMA---LKNAIEL  169 (253)
T ss_pred             hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHH---HHHHHHHHHhcCCCCceEEccccCCCCCCCHHHH---HHHHHHc
Confidence            356899999999999999999999999997544   56777888887763 55555543 4678877433   3445555


Q ss_pred             CC---cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          222 GY---RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       222 g~---~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      |.   ..+++|||+++|+++| .+|.+++.++..
T Consensus       170 ~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g  203 (253)
T TIGR01422       170 GVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS  203 (253)
T ss_pred             CCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence            54   3499999999999998 589999988653

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.55  E-value=5e-14  Score=117.25  Aligned_cols=95  Identities=17%  Similarity=0.115  Sum_probs=71.7

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++||+.++|+.|+++|++++++||+..     ....|++.|+..+++.++.+++ ...||++...   .+.++..|..
T Consensus        86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~-----~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~---~~~~~~~~~~  157 (185)
T TIGR01990        86 ADVLPGIKNLLDDLKKNNIKIALASASKN-----APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIF---LAAAEGLGVS  157 (185)
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcc-----HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHH---HHHHHHcCCC
Confidence            47899999999999999999999999643     2356888898877666665543 4567776433   3444445543


Q ss_pred             --EEEEEcCCccccCCCC-CCCcEEEe
Q 025203          225 --IWGVVGDQWSSFEGLP-KPKRTFKL  248 (256)
Q Consensus       225 --i~~~iGD~~sDl~ga~-~g~r~fkl  248 (256)
                        .+++|||+.+|+++|. +|.+++-+
T Consensus       158 ~~~~v~vgD~~~di~aA~~aG~~~i~v  184 (185)
T TIGR01990       158 PSECIGIEDAQAGIEAIKAAGMFAVGV  184 (185)
T ss_pred             HHHeEEEecCHHHHHHHHHcCCEEEec
Confidence              4899999999999984 78888865

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.55  E-value=3.9e-14  Score=120.58  Aligned_cols=99  Identities=13%  Similarity=0.125  Sum_probs=76.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++|+.|+++|++++++||.+..   .....|++.|+..++..+...++ ...||++..   ..+.+++.|.
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~---~~~~~~~~~~  156 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTP---LARPLLELLGLAKYFSVLIGGDSLAQRKPHPDP---LLLAAERLGV  156 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCcHhhCcEEEecCCCCCCCCChHH---HHHHHHHcCC
Confidence            4678999999999999999999999998654   36788888999877766666543 456777643   3344455554


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEec
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                        +.+++|||+.+|+.++ .+|.+++.+.
T Consensus       157 ~~~~~~~igDs~~d~~aa~~aG~~~i~v~  185 (213)
T TIGR01449       157 APQQMVYVGDSRVDIQAARAAGCPSVLLT  185 (213)
T ss_pred             ChhHeEEeCCCHHHHHHHHHCCCeEEEEc
Confidence              4599999999999988 4788888764

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.54  E-value=4e-14  Score=121.33  Aligned_cols=102  Identities=13%  Similarity=0.118  Sum_probs=77.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++|++|+++|++++++||.+...   ....|++.|+..++..++.+ +....||++...   ...+++.|.
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~---~~~~~~~~~  165 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVK---QWEKLERLGVRDFFDAVITSEEEGVEKPHPKIF---YAALKRLGV  165 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHhCChHHhccEEEEeccCCCCCCCHHHH---HHHHHHcCC
Confidence            35789999999999999999999999997543   56778889998776555544 445567877433   344445555


Q ss_pred             --cEEEEEcCCc-cccCCCC-CCCcEEEecCCC
Q 025203          224 --RIWGVVGDQW-SSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga~-~g~r~fklPnp~  252 (256)
                        ..+++|||++ +|+.+|. +|.+++-++.+.
T Consensus       166 ~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~  198 (221)
T TIGR02253       166 KPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK  198 (221)
T ss_pred             ChhhEEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence              3589999998 8999984 899998887653

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.54  E-value=1.1e-13  Score=119.21  Aligned_cols=101  Identities=15%  Similarity=0.081  Sum_probs=80.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||....   .+...++..|+..++..++..+. ...||++.   ..+..++..|.
T Consensus        90 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~---~~~~~~~~~~~  163 (222)
T PRK10826         90 TRPLLPGVREALALCKAQGLKIGLASASPLH---MLEAVLTMFDLRDYFDALASAEKLPYSKPHPE---VYLNCAAKLGV  163 (222)
T ss_pred             CCCCCCCHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHhCcchhcccEEEEcccCCCCCCCHH---HHHHHHHHcCC
Confidence            4689999999999999999999999998654   36778888999888766666543 45677663   33455555665


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        ..+++|||+.+|+.++ .+|.+++.+|+|
T Consensus       164 ~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~  194 (222)
T PRK10826        164 DPLTCVALEDSFNGMIAAKAARMRSIVVPAP  194 (222)
T ss_pred             CHHHeEEEcCChhhHHHHHHcCCEEEEecCC
Confidence              4599999999999998 589999999876

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.54  E-value=6.6e-14  Score=118.36  Aligned_cols=102  Identities=16%  Similarity=0.081  Sum_probs=76.8

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++|+.|+++|++++++||.+...   ....|++.|+..++..++.++ ....||++....   ..+++.|
T Consensus        89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~---~~~~~~~  162 (198)
T TIGR01428        89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAM---LKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQ---LALEALG  162 (198)
T ss_pred             hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHCCChhhhheeEehhhcCCCCCCHHHHH---HHHHHhC
Confidence            356789999999999999999999999987543   567788899877665555544 355678774433   3333344


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .  +.+++|||+..|+.++ .+|.+++.+..+
T Consensus       163 ~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~  194 (198)
T TIGR01428       163 VPPDEVLFVASNPWDLGGAKKFGFKTAWVNRP  194 (198)
T ss_pred             CChhhEEEEeCCHHHHHHHHHCCCcEEEecCC
Confidence            3  4589999999999998 589999887543

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.53  E-value=6.7e-14  Score=119.05  Aligned_cols=99  Identities=14%  Similarity=0.088  Sum_probs=74.9

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++|++|+++|++++++||++...   +...|+..|+..++..+...++ ...||.+...   .+.+++.|
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~---~~~~~~~~  145 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPR---ARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIV---REALRLLD  145 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHHHcCChhheeeEEecCcCCCCCCChHHH---HHHHHHcC
Confidence            357889999999999999999999999987543   6677889999877665555543 4467766333   34444555


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEe
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      .  ..+++|||+.+|+.++ .+|.+++.+
T Consensus       146 ~~~~~~l~igD~~~Di~aA~~~Gi~~i~~  174 (205)
T TIGR01454       146 VPPEDAVMVGDAVTDLASARAAGTATVAA  174 (205)
T ss_pred             CChhheEEEcCCHHHHHHHHHcCCeEEEE
Confidence            4  4599999999999987 478887765

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.53  E-value=7.1e-14  Score=124.93  Aligned_cols=141  Identities=18%  Similarity=0.210  Sum_probs=97.3

Q ss_pred             CCCcEEEEecCCCccCChHHHHHh------ccCCCCC----------------------CHHH-------HHHHHHh--c
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKH------GFGGERL----------------------NASS-------WEAWMKE--S  144 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~------~~g~~~~----------------------~~~~-------~~~wv~~--~  144 (256)
                      +..+++|||+||||+|+.+.+...      .+|.+..                      +...       +.+....  .
T Consensus        60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (273)
T PRK13225         60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQLGDCLP  139 (273)
T ss_pred             hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHHHhhcc
Confidence            347799999999999998766442      1232111                      1111       1111111  3


Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC-
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      ..+++||+.++|+.|+++|++++++||....   .+...|++.|+..++..+...+....|+     ....+.+++.+. 
T Consensus       140 ~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~---~~~~~L~~~gl~~~F~~vi~~~~~~~k~-----~~~~~~l~~~~~~  211 (273)
T PRK13225        140 ALQLFPGVADLLAQLRSRSLCLGILSSNSRQ---NIEAFLQRQGLRSLFSVVQAGTPILSKR-----RALSQLVAREGWQ  211 (273)
T ss_pred             cCCcCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHcCChhheEEEEecCCCCCCH-----HHHHHHHHHhCcC
Confidence            4678999999999999999999999999754   3678889999988877666554433333     223344444443 


Q ss_pred             -cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 -RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 -~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                       +.+++|||+.+|++++ .+|.+++.++.
T Consensus       212 p~~~l~IGDs~~Di~aA~~AG~~~I~v~~  240 (273)
T PRK13225        212 PAAVMYVGDETRDVEAARQVGLIAVAVTW  240 (273)
T ss_pred             hhHEEEECCCHHHHHHHHHCCCeEEEEec
Confidence             4599999999999998 47999887754

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.51  E-value=2e-13  Score=121.87  Aligned_cols=144  Identities=15%  Similarity=0.154  Sum_probs=99.5

Q ss_pred             CCCCcEEEEecCCCccCChHHHHHhc------cCCC------------------------------CCCHH-------HH
Q 025203          101 GDGKDAWIFDVDDTLLSTIPYFKKHG------FGGE------------------------------RLNAS-------SW  137 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~~~~~~------~g~~------------------------------~~~~~-------~~  137 (256)
                      +.-+++||||+||||+|+.+.+....      +|.+                              ..+++       .|
T Consensus        10 ~~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   89 (272)
T PRK13223         10 GRLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALF   89 (272)
T ss_pred             CccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence            44578999999999999977665421      2211                              01111       12


Q ss_pred             HHHHHh--cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHH
Q 025203          138 EAWMKE--SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQV  214 (256)
Q Consensus       138 ~~wv~~--~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~  214 (256)
                      .+++..  ...+++||+.++++.|+++|++++++||.++..   ....|.++|+..++..+...+. ...||++..   .
T Consensus        90 ~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~---~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~---~  163 (272)
T PRK13223         90 MEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERF---VAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAA---L  163 (272)
T ss_pred             HHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHH---HHHHHHHcCcHhhCeEEEecCCCCCCCCCcHH---H
Confidence            233322  235689999999999999999999999987643   5677788898877766666554 345676633   2


Q ss_pred             HHHHHhcCCc--EEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          215 RKRLVKEGYR--IWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       215 r~~l~~~g~~--i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      ...++..|.+  .+++|||+.+|++++ .+|.+++-+++
T Consensus       164 ~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~  202 (272)
T PRK13223        164 LFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY  202 (272)
T ss_pred             HHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEec
Confidence            3344445543  599999999999987 47888888765

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.51  E-value=2.5e-13  Score=122.06  Aligned_cols=132  Identities=18%  Similarity=0.162  Sum_probs=99.8

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .++++++||+|||+.++...        .+|      +|.......++|++.++++.|+++|++++++|||++..+..+.
T Consensus       156 ~~~~~~~~D~dgtl~~~~~~--------~~~------~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l  221 (300)
T PHA02530        156 GLPKAVIFDIDGTLAKMGGR--------SPY------DWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV  221 (300)
T ss_pred             CCCCEEEEECCCcCcCCCCC--------Ccc------chhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH
Confidence            45689999999999997631        223      3555567899999999999999999999999999999888889


Q ss_pred             HHHHhcCCCCcce--------EEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCC-CCCCcEEEec
Q 025203          182 DNLIHVGYHGWAS--------LELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       182 ~~L~~~G~~~~~~--------lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      ++|...|+. ++.        ++||+. ..+||++..+....+.+....++.+++|||+.+|+.++ .+|..++.+.
T Consensus       222 ~~l~~~~~~-f~~i~~~~~~~~~~~~~-~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~  296 (300)
T PHA02530        222 EWLRQTDIW-FDDLIGRPPDMHFQREQ-GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVA  296 (300)
T ss_pred             HHHHHcCCc-hhhhhCCcchhhhcccC-CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEec
Confidence            998877632 222        233333 24578887665554444333568899999999999987 4788888774

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.51  E-value=1.7e-13  Score=114.05  Aligned_cols=95  Identities=17%  Similarity=0.089  Sum_probs=72.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++++.|+++|++++++||+ .    .....|+..|+..+++.++..+. ...||.+..   ..+.+++.|.
T Consensus        86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~-~----~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~---~~~~~~~~~~  157 (185)
T TIGR02009        86 GAEVLPGIENFLKRLKKKGIAVGLGSSS-K----NADRILAKLGLTDYFDAIVDADEVKEGKPHPET---FLLAAELLGV  157 (185)
T ss_pred             CCCCCcCHHHHHHHHHHcCCeEEEEeCc-h----hHHHHHHHcChHHHCCEeeehhhCCCCCCChHH---HHHHHHHcCC
Confidence            4689999999999999999999999998 2    25677888999877666665543 446676633   2344455555


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEE
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFK  247 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fk  247 (256)
                        .-+++|||+..|+.+|. +|.+++-
T Consensus       158 ~~~~~v~IgD~~~di~aA~~~G~~~i~  184 (185)
T TIGR02009       158 SPNECVVFEDALAGVQAARAAGMFAVA  184 (185)
T ss_pred             CHHHeEEEeCcHhhHHHHHHCCCeEee
Confidence              34889999999999984 7887764

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.50  E-value=6e-14  Score=113.91  Aligned_cols=126  Identities=13%  Similarity=0.059  Sum_probs=88.0

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc--------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL--------  176 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~--------  176 (256)
                      ++++||+||||.++...+         | ...|.+      ..++||+.++++.|+++|++++++||.+...        
T Consensus         1 ~~~~~d~dgtl~~~~~~~---------~-~~~~~~------~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~   64 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSD---------Y-PRSLDD------WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEA   64 (147)
T ss_pred             CeEEEeCCCceeccCCcc---------c-CCCHHH------eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHH
Confidence            479999999999987421         1 112433      3689999999999999999999999987411        


Q ss_pred             ----HHHHHHHHHhcCCCCcceEEEe----cC-CCCCchhhhhhHHHHHHHHhcCCc--EEEEEcCCccccCCC-CCCCc
Q 025203          177 ----RSYTVDNLIHVGYHGWASLELR----GL-EDEYKKVQQYKAQVRKRLVKEGYR--IWGVVGDQWSSFEGL-PKPKR  244 (256)
Q Consensus       177 ----r~~T~~~L~~~G~~~~~~lilr----~~-~~~~kp~~~~K~~~r~~l~~~g~~--i~~~iGD~~sDl~ga-~~g~r  244 (256)
                          ...+...|++.|+.. +..+..    .+ ....||.+....   ..+++.|.+  .+++|||+..|+++| .+|.+
T Consensus        65 ~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~KP~~~~~~---~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~  140 (147)
T TIGR01656        65 FRAPNGRVLELLRQLGVAV-DGVLFCPHHPADNCSCRKPKPGLIL---EALKRLGVDASRSLVVGDRLRDLQAARNAGLA  140 (147)
T ss_pred             HHHHHHHHHHHHHhCCCce-eEEEECCCCCCCCCCCCCCCHHHHH---HHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence                134566788888862 222332    12 223577664433   333444544  599999999999998 58999


Q ss_pred             EEEecC
Q 025203          245 TFKLPN  250 (256)
Q Consensus       245 ~fklPn  250 (256)
                      ++.+|.
T Consensus       141 ~v~i~~  146 (147)
T TIGR01656       141 AVLLVD  146 (147)
T ss_pred             EEEecC
Confidence            999885

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.49  E-value=1.6e-13  Score=130.87  Aligned_cols=100  Identities=15%  Similarity=0.118  Sum_probs=76.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..+++||+.++|++|+++|++++++||++...   +.+.|+++|+..|+..++..++...+|.|.   .....+++.+.+
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~---~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~---~~~~al~~l~~~  401 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEY---LRAIVSYYDLDQWVTETFSIEQINSLNKSD---LVKSILNKYDIK  401 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHHHCCcHhhcceeEecCCCCCCCCcH---HHHHHHHhcCcc
Confidence            46889999999999999999999999987544   678889999988877777765533223232   123344445667


Q ss_pred             EEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          225 IWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       225 i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .+++|||+.+|+.++ .+|.+++.++.
T Consensus       402 ~~v~VGDs~~Di~aAk~AG~~~I~v~~  428 (459)
T PRK06698        402 EAAVVGDRLSDINAAKDNGLIAIGCNF  428 (459)
T ss_pred             eEEEEeCCHHHHHHHHHCCCeEEEEeC
Confidence            799999999999988 48899888754

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.49  E-value=1.2e-13  Score=116.87  Aligned_cols=88  Identities=14%  Similarity=0.021  Sum_probs=65.8

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc--
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR--  224 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~--  224 (256)
                      .+.+++.++|+.|+++|++++++||++..   .+...|+..|+..++..++..++...||++....   ..+++.|.+  
T Consensus       106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~---~~~~~~~~~~~  179 (197)
T TIGR01548       106 ETLLTPKGLLRELHRAPKGMAVVTGRPRK---DAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLI---LAAKALGVEAC  179 (197)
T ss_pred             ccccCHHHHHHHHHHcCCcEEEECCCCHH---HHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHH---HHHHHhCcCcc
Confidence            34455699999999999999999999754   3678889999988877666665533488774432   333444543  


Q ss_pred             EEEEEcCCccccCCCC
Q 025203          225 IWGVVGDQWSSFEGLP  240 (256)
Q Consensus       225 i~~~iGD~~sDl~ga~  240 (256)
                      .+++|||+.+|+.+|+
T Consensus       180 ~~i~vGD~~~Di~aA~  195 (197)
T TIGR01548       180 HAAMVGDTVDDIITGR  195 (197)
T ss_pred             cEEEEeCCHHHHHHHH
Confidence            5899999999998875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.49  E-value=3.1e-13  Score=121.49  Aligned_cols=100  Identities=15%  Similarity=0.018  Sum_probs=70.3

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcC---CCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVG---YHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G---~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      .+++||+.++|++|+++|++++++||.+...   ....|+..+   +..++..+...+....||++....   ..++..|
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~---~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~---~a~~~~~  216 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKA---VSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYN---LAAETLG  216 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhccccccCceEEEeccccCCCCCCHHHHH---HHHHHhC
Confidence            5799999999999999999999999987544   344444442   222334443333345688774433   3334445


Q ss_pred             Cc--EEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 YR--IWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~~--i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .+  .+++|||+++|+++| .+|.+++.+++.
T Consensus       217 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g  248 (286)
T PLN02779        217 VDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS  248 (286)
T ss_pred             cChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence            44  499999999999998 479999988764

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.48  E-value=1.3e-13  Score=122.30  Aligned_cols=100  Identities=13%  Similarity=0.044  Sum_probs=74.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc-ceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW-ASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~-~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...++||+.++|+.|+++|++++++||.+...   +...|+.+|+..+ +..++..+ ....||++..   ....+++.|
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~---~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~---~~~a~~~l~  172 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTREM---MDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWM---ALKNAIELG  172 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHHhhcCCCceEEEcCCcCCCCCCChHH---HHHHHHHcC
Confidence            46889999999999999999999999987644   5566666666554 35555544 3456787743   334455555


Q ss_pred             C---cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          223 Y---RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       223 ~---~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .   +.+++|||+++|+++| .+|.+++-+..
T Consensus       173 ~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~  204 (267)
T PRK13478        173 VYDVAACVKVDDTVPGIEEGLNAGMWTVGVIL  204 (267)
T ss_pred             CCCCcceEEEcCcHHHHHHHHHCCCEEEEEcc
Confidence            4   4599999999999998 47998887753

>PLN02940 riboflavin kinase

Probab=99.47  E-value=2.9e-13  Score=126.36  Aligned_cols=144  Identities=17%  Similarity=0.152  Sum_probs=100.2

Q ss_pred             CCCcEEEEecCCCccCChHHHHHh------ccCCC---------------------------CCCHHH----HHHHHH--
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKH------GFGGE---------------------------RLNASS----WEAWMK--  142 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~------~~g~~---------------------------~~~~~~----~~~wv~--  142 (256)
                      +..++||||+||||+|+.+.+...      .+|..                           +.+.+.    +.+...  
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQ   88 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence            457899999999999998766432      12210                           001111    111111  


Q ss_pred             hcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH-hcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHh
Q 025203          143 ESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI-HVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       143 ~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~-~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~  220 (256)
                      .....++||+.++|+.|+++|++++++||++...   +...|+ ..|+..++..++.+++ ...||++...   ...++.
T Consensus        89 ~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~---~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~---~~a~~~  162 (382)
T PLN02940         89 WCNIKALPGANRLIKHLKSHGVPMALASNSPRAN---IEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIF---LEAAKR  162 (382)
T ss_pred             HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHhccChHhhCCEEEehhhcCCCCCCHHHH---HHHHHH
Confidence            1346789999999999999999999999997543   456666 6788777777776654 4568877443   344444


Q ss_pred             cCC--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          221 EGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       221 ~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .|.  ..+++|||+.+|+++| .+|.+++.++..
T Consensus       163 lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g  196 (382)
T PLN02940        163 LNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSI  196 (382)
T ss_pred             cCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence            453  4599999999999988 589999988753

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.47  E-value=1.3e-13  Score=109.33  Aligned_cols=123  Identities=16%  Similarity=0.147  Sum_probs=84.0

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc-----HHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-----RSY  179 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~-----r~~  179 (256)
                      ++++||+||||+++.++..            .|      ....++|++.+++++|+++|++++++||++...     .+.
T Consensus         1 k~~~~D~dgtL~~~~~~~~------------~~------~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~   62 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYVD------------DE------DERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGR   62 (132)
T ss_pred             CEEEEeCCCceecCCCCCC------------CH------HHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHH
Confidence            5899999999997532210            12      125789999999999999999999999998332     334


Q ss_pred             HHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcC-CccccCCC-CCCCcEEEe
Q 025203          180 TVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGD-QWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       180 T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD-~~sDl~ga-~~g~r~fkl  248 (256)
                      +.+.|+.+|+. ++..+...  ...||.+.......+.+.....+.+++||| ...|+.+| .+|.+++-+
T Consensus        63 ~~~~l~~~~l~-~~~~~~~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~  130 (132)
T TIGR01662        63 VARRLEELGVP-IDVLYACP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILV  130 (132)
T ss_pred             HHHHHHHCCCC-EEEEEECC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence            67788888886 33333333  345666643333333221122356999999 69999998 478888765

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.46  E-value=5.9e-13  Score=111.31  Aligned_cols=97  Identities=9%  Similarity=0.061  Sum_probs=72.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++|+ .++|..|+++ ++++++||.++..   ....|+++|+..++..++..++ ...||++....   ..+++.|.
T Consensus        86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~---~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~---~~~~~~~~  157 (188)
T PRK10725         86 SVEPLPL-IEVVKAWHGR-RPMAVGTGSESAI---AEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFL---RCAQLMGV  157 (188)
T ss_pred             cCCCccH-HHHHHHHHhC-CCEEEEcCCchHH---HHHHHHhCCcHhHceEEEehhhccCCCCChHHHH---HHHHHcCC
Confidence            4567886 6999999875 8999999987544   5778899999888777766654 56788875433   33444454


Q ss_pred             c--EEEEEcCCccccCCC-CCCCcEEEec
Q 025203          224 R--IWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 ~--i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      .  .+++|||+.+|+++| .+|.+++.+.
T Consensus       158 ~~~~~l~igDs~~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        158 QPTQCVVFEDADFGIQAARAAGMDAVDVR  186 (188)
T ss_pred             CHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence            3  489999999999998 4799988764

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.46  E-value=7.7e-13  Score=113.48  Aligned_cols=100  Identities=13%  Similarity=0.094  Sum_probs=75.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++++.|+++|++++++||.....   ....|+++|+..++..++..+. ...||.+..   .+..++..+.
T Consensus        91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~~~~  164 (226)
T PRK13222         91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPF---VAPLLEALGIADYFSVVIGGDSLPNKKPDPAP---LLLACEKLGL  164 (226)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHcCCccCccEEEcCCCCCCCCcChHH---HHHHHHHcCC
Confidence            46799999999999999999999999997543   4677788899877766666554 345665532   3334444444


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                        +.+++|||+.+|+.++. +|.+++.++.
T Consensus       165 ~~~~~i~igD~~~Di~~a~~~g~~~i~v~~  194 (226)
T PRK13222        165 DPEEMLFVGDSRNDIQAARAAGCPSVGVTY  194 (226)
T ss_pred             ChhheEEECCCHHHHHHHHHCCCcEEEECc
Confidence              45899999999999874 7888877753

>PRK09449 dUMP phosphatase; Provisional

Probab=99.44  E-value=6.4e-13  Score=114.29  Aligned_cols=98  Identities=17%  Similarity=0.091  Sum_probs=74.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++|+.|+ +|++++++||.+..   .+...|++.|+..++..++.++ ....||++...   ...+++.|.
T Consensus        93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~---~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~---~~~~~~~~~  165 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GKVKMGIITNGFTE---LQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIF---DYALEQMGN  165 (224)
T ss_pred             cCccCccHHHHHHHHH-hCCeEEEEeCCcHH---HHHHHHHhCChHHHcCEEEEECccCCCCCCHHHH---HHHHHHcCC
Confidence            3678999999999999 68999999998643   3567788999987765555444 45578877443   344455553


Q ss_pred             ---cEEEEEcCCc-cccCCC-CCCCcEEEec
Q 025203          224 ---RIWGVVGDQW-SSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 ---~i~~~iGD~~-sDl~ga-~~g~r~fklP  249 (256)
                         +.+++|||+. +|+.+| .+|.+++.++
T Consensus       166 ~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~  196 (224)
T PRK09449        166 PDRSRVLMVGDNLHSDILGGINAGIDTCWLN  196 (224)
T ss_pred             CCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence               4699999998 799998 5799988875

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.44  E-value=4.7e-13  Score=111.97  Aligned_cols=94  Identities=12%  Similarity=-0.016  Sum_probs=68.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CC----CchhhhhhHHHHHHHH
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DE----YKKVQQYKAQVRKRLV  219 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~----~kp~~~~K~~~r~~l~  219 (256)
                      ..+++||+.++|+.|+   .+++++||.+...   ....|++.|+..++..++..++ ..    .||++......   ++
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~---~~  152 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAH---ARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKA---LR  152 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCHHH---HHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHH---HH
Confidence            3568999999999997   5799999987543   6788888999877665665544 33    37877544333   33


Q ss_pred             hcCC--cEEEEEcCCccccCCC-CCCCcEEE
Q 025203          220 KEGY--RIWGVVGDQWSSFEGL-PKPKRTFK  247 (256)
Q Consensus       220 ~~g~--~i~~~iGD~~sDl~ga-~~g~r~fk  247 (256)
                      +.|.  ..+++|||+..|+++| .+|.+++.
T Consensus       153 ~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~  183 (184)
T TIGR01993       153 EAGVDPERAIFFDDSARNIAAAKALGMKTVL  183 (184)
T ss_pred             HhCCCccceEEEeCCHHHHHHHHHcCCEEee
Confidence            3443  4589999999999987 47888764

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.44  E-value=3.6e-13  Score=111.36  Aligned_cols=127  Identities=15%  Similarity=0.101  Sum_probs=88.1

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc---------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES---------  175 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~---------  175 (256)
                      ++++||.||||+.+.+.         .|... .     ....+++||+.++|++|+++|++++++||.+..         
T Consensus         2 ~~~~~d~dg~l~~~~~~---------~~~~~-~-----~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~   66 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPS---------DFQVD-A-----LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQAD   66 (161)
T ss_pred             CEEEEeCCCCccccCCC---------ccccC-C-----HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHH
Confidence            68999999999995431         11000 1     112578999999999999999999999997521         


Q ss_pred             ---cHHHHHHHHHhcCCCCcceEEEe-----cCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-CCCCc
Q 025203          176 ---LRSYTVDNLIHVGYHGWASLELR-----GLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPKR  244 (256)
Q Consensus       176 ---~r~~T~~~L~~~G~~~~~~lilr-----~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r  244 (256)
                         ....+.+.|.++|+. ++..+.+     ++....||.+...   ...++..|.  +.+++|||+++|+.+| .+|.+
T Consensus        67 ~~~~~~~~~~~l~~~gl~-fd~ii~~~~~~~~~~~~~KP~~~~~---~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~  142 (161)
T TIGR01261        67 FDGPHNLMLQIFRSQGII-FDDVLICPHFPDDNCDCRKPKIKLL---EPYLKKNLIDKARSYVIGDRETDMQLAENLGIR  142 (161)
T ss_pred             HHHHHHHHHHHHHHCCCc-eeEEEECCCCCCCCCCCCCCCHHHH---HHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence               123456678899997 6566665     2334557766332   233344443  4599999999999998 57888


Q ss_pred             EEEecC
Q 025203          245 TFKLPN  250 (256)
Q Consensus       245 ~fklPn  250 (256)
                      ++.+..
T Consensus       143 ~i~~~~  148 (161)
T TIGR01261       143 GIQYDE  148 (161)
T ss_pred             EEEECh
Confidence            887643

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.43  E-value=5.3e-13  Score=113.12  Aligned_cols=94  Identities=14%  Similarity=0.189  Sum_probs=69.9

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++||+.++|++|+++|++++++||.+..    ....|++.|+..++..++.+ +....||++...   +..+++.|.+
T Consensus       104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~---~~~~~~~~~~  176 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERGLILGVISNFDSR----LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIF---QEALERAGIS  176 (203)
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEeCCchh----HHHHHHHCCcHHhcceEEeecccCCCCCCHHHH---HHHHHHcCCC
Confidence            368999999999999999999999997642    35678888987776555544 445567877433   3444555653


Q ss_pred             --EEEEEcCCc-cccCCC-CCCCcEE
Q 025203          225 --IWGVVGDQW-SSFEGL-PKPKRTF  246 (256)
Q Consensus       225 --i~~~iGD~~-sDl~ga-~~g~r~f  246 (256)
                        .+++|||++ +|+++| .+|.+++
T Consensus       177 ~~~~~~IgD~~~~Di~~A~~aG~~~i  202 (203)
T TIGR02252       177 PEEALHIGDSLRNDYQGARAAGWRAL  202 (203)
T ss_pred             hhHEEEECCCchHHHHHHHHcCCeee
Confidence              599999998 899988 4787765

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.41  E-value=6.8e-13  Score=110.24  Aligned_cols=125  Identities=16%  Similarity=0.019  Sum_probs=83.5

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccH-----
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLR-----  177 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r-----  177 (256)
                      ..+.++||+||||+.+....      ....+++.|        ..++||+.++|+.|+++|++++++||++...+     
T Consensus        12 ~~k~~~~D~Dgtl~~~~~~~------~~~~~~~~~--------~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~   77 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRSGK------VFPTSASDW--------RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSA   77 (166)
T ss_pred             cCcEEEEeCCCceEecCCCC------cccCChHHe--------EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccH
Confidence            35799999999999854210      001133333        34789999999999999999999999876421     


Q ss_pred             ----HHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC----CcEEEEEcCCc--------cccCCCC-
Q 025203          178 ----SYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG----YRIWGVVGDQW--------SSFEGLP-  240 (256)
Q Consensus       178 ----~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g----~~i~~~iGD~~--------sDl~ga~-  240 (256)
                          ..+...|+++|++. +.++.......+||.+..   ....+++.|    .+.+++|||+.        +|+++|. 
T Consensus        78 ~~~~~~i~~~l~~~gl~~-~~ii~~~~~~~~KP~p~~---~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~  153 (166)
T TIGR01664        78 ESFKNKIEAFLEKLKVPI-QVLAATHAGLYRKPMTGM---WEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKN  153 (166)
T ss_pred             HHHHHHHHHHHHHcCCCE-EEEEecCCCCCCCCccHH---HHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHH
Confidence                23567789999863 444444333456776633   233334444    35699999996        5999884 


Q ss_pred             CCCcE
Q 025203          241 KPKRT  245 (256)
Q Consensus       241 ~g~r~  245 (256)
                      +|.++
T Consensus       154 aGi~~  158 (166)
T TIGR01664       154 LGLEF  158 (166)
T ss_pred             CCCCc
Confidence            66654

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.41  E-value=1.2e-12  Score=111.05  Aligned_cols=100  Identities=12%  Similarity=0.072  Sum_probs=72.4

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh-cCCCCcc-eEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH-VGYHGWA-SLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~-~G~~~~~-~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      .+++||+.++++.|+++|++++++||.+...   ....+.. .|+..++ .++...+....||++....   ..+++.|.
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~---~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~---~~~~~~~~  156 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLH---TTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQ---HVLQAEGF  156 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhh---HHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHH---HHHHHcCC
Confidence            4689999999999999999999999987543   2233333 3555444 4444545566788885443   33444454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        ..+++|||+..|+.+| .+|.+++.++++
T Consensus       157 ~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        157 SAADAVFFDDNADNIEAANALGITSILVTDK  187 (199)
T ss_pred             ChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence              4599999999999988 489999998875

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.40  E-value=7.2e-13  Score=110.66  Aligned_cols=122  Identities=14%  Similarity=0.109  Sum_probs=82.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc--------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL--------  176 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~--------  176 (256)
                      ++++||.||||+...+|-            ..+      ....++||+.++|++|+++|++++++||.+...        
T Consensus         2 ~~~~~D~Dgtl~~~~~~~------------~~~------~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~   63 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYV------------HEI------DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQ   63 (176)
T ss_pred             CEEEEeCCCCEeCCCCCC------------CCH------HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHH
Confidence            689999999999644321            012      235688999999999999999999999988521        


Q ss_pred             ----HHHHHHHHHhcCCCCcceEEEec-----------CCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC
Q 025203          177 ----RSYTVDNLIHVGYHGWASLELRG-----------LEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL  239 (256)
Q Consensus       177 ----r~~T~~~L~~~G~~~~~~lilr~-----------~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga  239 (256)
                          +......|.+.|+. ++.++...           +...+||++..   ....+++.|.  ..+++|||+++|+.+|
T Consensus        64 ~~~~~~~~~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~---~~~a~~~~~~~~~~~v~VGDs~~Di~aA  139 (176)
T TIGR00213        64 FEQLTEWMDWSLAERDVD-LDGIYYCPHHPEGVEEFRQVCDCRKPKPGM---LLQARKELHIDMAQSYMVGDKLEDMQAG  139 (176)
T ss_pred             HHHHHHHHHHHHHHcCCC-ccEEEECCCCCcccccccCCCCCCCCCHHH---HHHHHHHcCcChhhEEEEcCCHHHHHHH
Confidence                12233456667776 44544432           22245777633   3344455554  4589999999999998


Q ss_pred             -CCCCcE-EEe
Q 025203          240 -PKPKRT-FKL  248 (256)
Q Consensus       240 -~~g~r~-fkl  248 (256)
                       .+|.++ +.+
T Consensus       140 ~~aG~~~~i~v  150 (176)
T TIGR00213       140 VAAKVKTNVLV  150 (176)
T ss_pred             HHCCCcEEEEE
Confidence             478887 444

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.39  E-value=1.4e-12  Score=109.30  Aligned_cols=126  Identities=11%  Similarity=0.028  Sum_probs=86.1

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc-----c--
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES-----L--  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~-----~--  176 (256)
                      .++++||.||||..+...|..           .++      ...++||+.++|++|+++|++++++||.+..     .  
T Consensus         3 ~~~~~~d~~~t~~~~~~~~~~-----------~~~------~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~   65 (181)
T PRK08942          3 MKAIFLDRDGVINVDSDGYVK-----------SPD------EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEA   65 (181)
T ss_pred             ccEEEEECCCCcccCCccccC-----------CHH------HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHH
Confidence            479999999999887533211           122      2468999999999999999999999998631     1  


Q ss_pred             -----HHHHHHHHHhcCCCCcceEEEecC-----CCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-CCCC
Q 025203          177 -----RSYTVDNLIHVGYHGWASLELRGL-----EDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPK  243 (256)
Q Consensus       177 -----r~~T~~~L~~~G~~~~~~lilr~~-----~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~  243 (256)
                           .+.....|++.|+. ++.++....     ....||++...   ...++..|.  +.+++|||+.+|+.+| .+|.
T Consensus        66 ~~~~~~~~~~~~l~~~g~~-f~~i~~~~~~~~~~~~~~KP~p~~~---~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~  141 (181)
T PRK08942         66 QLNALHEKMDWSLADRGGR-LDGIYYCPHHPEDGCDCRKPKPGML---LSIAERLNIDLAGSPMVGDSLRDLQAAAAAGV  141 (181)
T ss_pred             HHHHHHHHHHHHHHHcCCc-cceEEECCCCCCCCCcCCCCCHHHH---HHHHHHcCCChhhEEEEeCCHHHHHHHHHCCC
Confidence                 12234456677874 455554321     23467777433   334444454  4599999999999988 4788


Q ss_pred             cEEEecC
Q 025203          244 RTFKLPN  250 (256)
Q Consensus       244 r~fklPn  250 (256)
                      +++.++.
T Consensus       142 ~~i~v~~  148 (181)
T PRK08942        142 TPVLVRT  148 (181)
T ss_pred             eEEEEcC
Confidence            8777753

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.39  E-value=6.1e-13  Score=103.33  Aligned_cols=120  Identities=20%  Similarity=0.203  Sum_probs=83.3

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      ++|||+||||....++...                  .....++|++.+++++|+++|++++++||+.   +......++
T Consensus         1 ~~vfD~D~tl~~~~~~~~~------------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~   59 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE------------------IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLE   59 (139)
T ss_pred             CeEEccCCceEccCccccc------------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHH
Confidence            4799999999998755321                  2347889999999999999999999999998   445778888


Q ss_pred             hcCCCCcceEEEecCC-CCC----------------chhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCCC-CCcEEE
Q 025203          186 HVGYHGWASLELRGLE-DEY----------------KKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPK-PKRTFK  247 (256)
Q Consensus       186 ~~G~~~~~~lilr~~~-~~~----------------kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~-g~r~fk  247 (256)
                      ..|+..+...++.... ...                ||.+..+....+.+. ..++.++++||+.+|+..+.. |.+++.
T Consensus        60 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~igD~~~d~~~~~~~g~~~i~  138 (139)
T cd01427          60 ELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG-VDPEEVLMVGDSLNDIEMAKAAGGLGVA  138 (139)
T ss_pred             HcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcC-CChhhEEEeCCCHHHHHHHHHcCCceee
Confidence            8888554443443332 111                343333323333322 224679999999999998754 777764

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK06769 hypothetical protein; Validated

Probab=99.38  E-value=6.5e-13  Score=110.91  Aligned_cols=124  Identities=17%  Similarity=0.155  Sum_probs=83.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc-----H
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-----R  177 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~-----r  177 (256)
                      +.++++||.||||.-..            +       |.......++||+.++|++|+++|++++++||.+...     .
T Consensus         3 ~~~~~~~d~d~~~~~~~------------~-------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~   63 (173)
T PRK06769          3 NIQAIFIDRDGTIGGDT------------T-------IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATI   63 (173)
T ss_pred             CCcEEEEeCCCcccCCC------------C-------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCH
Confidence            56899999999994211            0       0111235789999999999999999999999987421     1


Q ss_pred             HHHHHHHHhcCCCCcce-EEEec-CCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-CCCCcEEEe
Q 025203          178 SYTVDNLIHVGYHGWAS-LELRG-LEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       178 ~~T~~~L~~~G~~~~~~-lilr~-~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      ..+...|+..|+..+.. ....+ .....||.+...   .+.+++.|.  +.+++|||+++|+.+| .+|.+++.+
T Consensus        64 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~---~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v  136 (173)
T PRK06769         64 ADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGML---LQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV  136 (173)
T ss_pred             HHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHH---HHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence            23455577888764321 11112 224567777433   234444454  4599999999999987 478888766

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.37  E-value=3.4e-12  Score=105.58  Aligned_cols=95  Identities=16%  Similarity=0.072  Sum_probs=69.4

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcC--
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEG--  222 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g--  222 (256)
                      .+++||+.++++.|+++|++++++||.+...    ...+.+.|+..++..++.+ +....||++......   +++.|  
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~----~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~---~~~~~~~  156 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH----AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLA---LKKLGLK  156 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHH---HHHcCCC
Confidence            6889999999999999999999999987543    2333448887766555544 345677877444333   33334  


Q ss_pred             CcEEEEEcCCccccCCC-CCCCcEEE
Q 025203          223 YRIWGVVGDQWSSFEGL-PKPKRTFK  247 (256)
Q Consensus       223 ~~i~~~iGD~~sDl~ga-~~g~r~fk  247 (256)
                      ...+++|||+..|+.+| .+|.+++.
T Consensus       157 ~~~~~~vgD~~~di~aA~~~G~~~i~  182 (183)
T TIGR01509       157 PEECLFVDDSPAGIEAAKAAGMHTVL  182 (183)
T ss_pred             cceEEEEcCCHHHHHHHHHcCCEEEe
Confidence            35699999999999988 47888764

HAD subfamilies caused by an overly broad single model.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.36  E-value=5.1e-12  Score=107.80  Aligned_cols=103  Identities=13%  Similarity=0.080  Sum_probs=71.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||....... ....+...|+..+++.+..+ +....||++...   ...+++.|.
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~-~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~---~~~~~~~g~  167 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHS-AEEALLPGDIMALFDAVVESCLEGLRKPDPRIY---QLMLERLGV  167 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccch-hhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHH---HHHHHHcCC
Confidence            4678999999999999999999999998653311 23334445665554444443 334568877443   234444554


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        +.+++|||+..|+.+| .+|.+++.+.++
T Consensus       168 ~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~  198 (211)
T TIGR02247       168 APEECVFLDDLGSNLKPAAALGITTIKVSDE  198 (211)
T ss_pred             CHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence              3488999999999998 479999888653

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.36  E-value=1.2e-12  Score=106.06  Aligned_cols=128  Identities=23%  Similarity=0.241  Sum_probs=80.5

Q ss_pred             EEEEecCCCccCChHHHHHhc------cC----------CCCCC-----HHHHHHHHH-hcCCcchHHHHHHHHHHHHcC
Q 025203          106 AWIFDVDDTLLSTIPYFKKHG------FG----------GERLN-----ASSWEAWMK-ESKAPALEHTLNLFHEIKNRG  163 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~------~g----------~~~~~-----~~~~~~wv~-~~~~~~~pg~~ell~~L~~~G  163 (256)
                      +|+||+||||+|+.+-+....      +|          +.+..     ...|++... ......+||+.++++.|+++|
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~L~~~g   80 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDFQALKALRGLAEELLYRIATSFEELLGYDAEEAYIRGAADLLKRLKEAG   80 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHHHHHhcccHHHHHHHHccChHHHHHHHHHHHHHhCcchhheeccCHHHHHHHHHHCc
Confidence            489999999999976543321      12          11110     012222221 134567899999999999999


Q ss_pred             CeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc-EEEEEcCCccccCCCC
Q 025203          164 VKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR-IWGVVGDQWSSFEGLP  240 (256)
Q Consensus       164 ~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~-i~~~iGD~~sDl~ga~  240 (256)
                      ++++++||++...   ....++.. +..++..+...++...||++...   .+.+++.|.. .+++|||+..|+.++.
T Consensus        81 ~~~~i~T~~~~~~---~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~---~~~~~~~~~~~~~l~iGDs~~Di~aa~  151 (154)
T TIGR01549        81 IKLGIISNGSLRA---QKLLLRKH-LGDYFDLILGSDEFGAKPEPEIF---LAALESLGLPPEVLHVGDNLNDIEGAR  151 (154)
T ss_pred             CeEEEEeCCchHH---HHHHHHHH-HHhcCcEEEecCCCCCCcCHHHH---HHHHHHcCCCCCEEEEeCCHHHHHHHH
Confidence            9999999998654   34444444 44454444444443377776433   3334444443 5899999999998874

HAD subfamilies caused by an overly broad single model.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.36  E-value=7.4e-13  Score=107.66  Aligned_cols=101  Identities=18%  Similarity=0.124  Sum_probs=74.7

Q ss_pred             hcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce-EEEecCCCCCchhhhhhHHHHHHHHhc
Q 025203          143 ESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS-LELRGLEDEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       143 ~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~-lilr~~~~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ....+++||+.++|+.|+++|++++++||.+..   .....|++.|+..++. ++...+....||++.....+.+.+ ..
T Consensus        73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~---~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~-~~  148 (176)
T PF13419_consen   73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRE---RIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKL-GI  148 (176)
T ss_dssp             HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHH---HHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHH-TS
T ss_pred             hhccchhhhhhhhhhhcccccceeEEeecCCcc---cccccccccccccccccccccchhhhhhhHHHHHHHHHHHc-CC
Confidence            367899999999999999999999999999743   3677888888886654 444444455777775443333333 11


Q ss_pred             CCcEEEEEcCCccccCCCC-CCCcEEE
Q 025203          222 GYRIWGVVGDQWSSFEGLP-KPKRTFK  247 (256)
Q Consensus       222 g~~i~~~iGD~~sDl~ga~-~g~r~fk  247 (256)
                      ....+++|||+..|+.+|. +|.+++-
T Consensus       149 ~p~~~~~vgD~~~d~~~A~~~G~~~i~  175 (176)
T PF13419_consen  149 PPEEILFVGDSPSDVEAAKEAGIKTIW  175 (176)
T ss_dssp             SGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred             CcceEEEEeCCHHHHHHHHHcCCeEEe
Confidence            3356999999999999884 7888874

...

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.35  E-value=5.4e-12  Score=108.43  Aligned_cols=95  Identities=14%  Similarity=0.046  Sum_probs=71.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEEEec-CCCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLELRG-LEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~lilr~-~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ..+++||+.++++.|   +++++++||.+.   ..+...|+.+|+..++ ..++.+ +....||++...   ...+++.|
T Consensus        86 ~~~~~~gv~~~L~~L---~~~~~ivTn~~~---~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~---~~a~~~~~  156 (221)
T PRK10563         86 ELEPIAGANALLESI---TVPMCVVSNGPV---SKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALM---FHAAEAMN  156 (221)
T ss_pred             cCCcCCCHHHHHHHc---CCCEEEEeCCcH---HHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHH---HHHHHHcC
Confidence            468899999999988   599999999864   3467788889998776 456555 345678877543   33444555


Q ss_pred             Cc--EEEEEcCCccccCCC-CCCCcEEEe
Q 025203          223 YR--IWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       223 ~~--i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      ..  .+++|||+++|+++| .+|.+++.+
T Consensus       157 ~~p~~~l~igDs~~di~aA~~aG~~~i~~  185 (221)
T PRK10563        157 VNVENCILVDDSSAGAQSGIAAGMEVFYF  185 (221)
T ss_pred             CCHHHeEEEeCcHhhHHHHHHCCCEEEEE
Confidence            43  489999999999987 478888766

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.35  E-value=5.9e-12  Score=103.12  Aligned_cols=110  Identities=25%  Similarity=0.257  Sum_probs=86.7

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHH
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSY  179 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~  179 (256)
                      +..|.+++++|+|+||+.=.                         ...+-|.+.+.+..++++|++++++||.++..   
T Consensus        24 ~~~Gikgvi~DlDNTLv~wd-------------------------~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~R---   75 (175)
T COG2179          24 KAHGIKGVILDLDNTLVPWD-------------------------NPDATPELRAWLAELKEAGIKVVVVSNNKESR---   75 (175)
T ss_pred             HHcCCcEEEEeccCceeccc-------------------------CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHH---
Confidence            34678999999999999811                         24455899999999999999999999987654   


Q ss_pred             HHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc--EEEEEcCCc-cccCCCC-CCCcEEEe
Q 025203          180 TVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR--IWGVVGDQW-SSFEGLP-KPKRTFKL  248 (256)
Q Consensus       180 T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~--i~~~iGD~~-sDl~ga~-~g~r~fkl  248 (256)
                      .....+++|++.    |.+.    .||-+   ...++++++.+.+  .+++||||. +|+.||+ +|+||+.+
T Consensus        76 V~~~~~~l~v~f----i~~A----~KP~~---~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV  137 (175)
T COG2179          76 VARAAEKLGVPF----IYRA----KKPFG---RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILV  137 (175)
T ss_pred             HHhhhhhcCCce----eecc----cCccH---HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEE
Confidence            566778888873    3332    23332   5678899888875  499999997 9999996 89999987

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.33  E-value=8.5e-12  Score=106.73  Aligned_cols=97  Identities=11%  Similarity=0.142  Sum_probs=72.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhc-C
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKE-G  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~-g  222 (256)
                      ..+++||+.++++.|+++ ++++++||.....   ....|+++|+..+++.++.+.. ...||++...   ...++.. |
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~---~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~---~~~~~~~~~  167 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRET---QYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIF---NYALERMPK  167 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCCchHH---HHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHH---HHHHHHhcC
Confidence            367899999999999999 9999999987543   5667888999887666665543 4567777433   2344444 5


Q ss_pred             C--cEEEEEcCCc-cccCCC-CCCCcEEEe
Q 025203          223 Y--RIWGVVGDQW-SSFEGL-PKPKRTFKL  248 (256)
Q Consensus       223 ~--~i~~~iGD~~-sDl~ga-~~g~r~fkl  248 (256)
                      .  ..+++|||+. +|+++| .+|.+++.+
T Consensus       168 ~~~~~~v~igD~~~~di~~A~~~G~~~i~~  197 (224)
T TIGR02254       168 FSKEEVLMIGDSLTADIKGGQNAGLDTCWM  197 (224)
T ss_pred             CCchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence            4  4599999997 899988 478887766

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PHA02597 30

Probab=99.32  E-value=1e-11  Score=104.96  Aligned_cols=138  Identities=20%  Similarity=0.140  Sum_probs=84.0

Q ss_pred             CcEEEEecCCCccCChH----HHHHhccC---------CCC---------CCHHH----HHHHHH---hcCCcchHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIP----YFKKHGFG---------GER---------LNASS----WEAWMK---ESKAPALEHTLN  154 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~----~~~~~~~g---------~~~---------~~~~~----~~~wv~---~~~~~~~pg~~e  154 (256)
                      .++||||+||||+|..+    .+.+.++.         ...         .+.+.    +..|..   ....+++||+.+
T Consensus         2 ~k~viFDlDGTLiD~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~e   81 (197)
T PHA02597          2 KPTILTDVDGVLLSWQSGLPYFAQKYNIPTDHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNSDFIRYLSAYDDALD   81 (197)
T ss_pred             CcEEEEecCCceEchhhccHHHHHhcCCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHHHHHHhccCCCCHHH
Confidence            47999999999999765    22222211         100         11111    222221   144679999999


Q ss_pred             HHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC----cceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEc
Q 025203          155 LFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG----WASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVG  230 (256)
Q Consensus       155 ll~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~----~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iG  230 (256)
                      +|++|++++ +++++||.+....   ...++.+|+..    ++..++..+....||.     .....+++.|.+.+++||
T Consensus        82 ~L~~L~~~~-~~~i~Tn~~~~~~---~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~-----~~~~a~~~~~~~~~v~vg  152 (197)
T PHA02597         82 VINKLKEDY-DFVAVTALGDSID---ALLNRQFNLNALFPGAFSEVLMCGHDESKEK-----LFIKAKEKYGDRVVCFVD  152 (197)
T ss_pred             HHHHHHhcC-CEEEEeCCccchh---HHHHhhCCHHHhCCCcccEEEEeccCcccHH-----HHHHHHHHhCCCcEEEeC
Confidence            999999975 6888898765432   22333444432    3334444433333432     233444555656789999


Q ss_pred             CCccccCCCC-C--CCcEEEecC
Q 025203          231 DQWSSFEGLP-K--PKRTFKLPN  250 (256)
Q Consensus       231 D~~sDl~ga~-~--g~r~fklPn  250 (256)
                      |+.+|+++|. +  |.+++-+.+
T Consensus       153 Ds~~di~aA~~a~~Gi~~i~~~~  175 (197)
T PHA02597        153 DLAHNLDAAHEALSQLPVIHMLR  175 (197)
T ss_pred             CCHHHHHHHHHHHcCCcEEEecc
Confidence            9999999984 6  998887743

2 hypothetical protein; Provisional

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.32  E-value=1e-11  Score=108.54  Aligned_cols=94  Identities=11%  Similarity=0.067  Sum_probs=69.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++|+.|+++ ++++++||.+..        ++..|+..++..++..+ ....||++...   ...++..|.
T Consensus       111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~--------~~~~gl~~~fd~i~~~~~~~~~KP~p~~~---~~a~~~~~~  178 (238)
T PRK10748        111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ--------PELFGLGDYFEFVLRAGPHGRSKPFSDMY---HLAAEKLNV  178 (238)
T ss_pred             cCCCCccHHHHHHHHHcC-CCEEEEECCCch--------HHHCCcHHhhceeEecccCCcCCCcHHHH---HHHHHHcCC
Confidence            367889999999999875 999999997643        36678887766665554 34567777433   233444454


Q ss_pred             --cEEEEEcCCc-cccCCC-CCCCcEEEecC
Q 025203          224 --RIWGVVGDQW-SSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga-~~g~r~fklPn  250 (256)
                        +.+++|||++ .|+.+| .+|.+++-+..
T Consensus       179 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~  209 (238)
T PRK10748        179 PIGEILHVGDDLTTDVAGAIRCGMQACWINP  209 (238)
T ss_pred             ChhHEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence              3599999995 999998 58999887753

>PLN02954 phosphoserine phosphatase

Probab=99.30  E-value=2.6e-11  Score=104.25  Aligned_cols=140  Identities=20%  Similarity=0.197  Sum_probs=85.6

Q ss_pred             CCcEEEEecCCCccCChHHHHHh-ccCC---------------CCCC-------------HHHHHHHHHhcCCcchHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKH-GFGG---------------ERLN-------------ASSWEAWMKESKAPALEHTL  153 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~-~~g~---------------~~~~-------------~~~~~~wv~~~~~~~~pg~~  153 (256)
                      .+++|+||+||||+++...-.-. .||.               -.+.             .+.+.+++......++||+.
T Consensus        11 ~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~   90 (224)
T PLN02954         11 SADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEKRPPRLSPGIP   90 (224)
T ss_pred             cCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHccCCCCccHH
Confidence            47899999999999986432211 1221               0110             12233444444456899999


Q ss_pred             HHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC--cc--eEEEec-------CCCCCchhhhhhH-HHHHHHHhc
Q 025203          154 NLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG--WA--SLELRG-------LEDEYKKVQQYKA-QVRKRLVKE  221 (256)
Q Consensus       154 ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~--~~--~lilr~-------~~~~~kp~~~~K~-~~r~~l~~~  221 (256)
                      ++++.|+++|++++++|+.....   +...|+.+|++.  ++  .+....       ......+....|+ .+++.++..
T Consensus        91 e~l~~l~~~g~~~~IvS~~~~~~---i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~  167 (224)
T PLN02954         91 ELVKKLRARGTDVYLVSGGFRQM---IAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKH  167 (224)
T ss_pred             HHHHHHHHCCCEEEEECCCcHHH---HHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHc
Confidence            99999999999999999997543   677788888862  22  111111       1000000011122 233444455


Q ss_pred             CCcEEEEEcCCccccCCCCCCCcE
Q 025203          222 GYRIWGVVGDQWSSFEGLPKPKRT  245 (256)
Q Consensus       222 g~~i~~~iGD~~sDl~ga~~g~r~  245 (256)
                      |...+++|||+.+|+.++.+|...
T Consensus       168 ~~~~~i~iGDs~~Di~aa~~~~~~  191 (224)
T PLN02954        168 GYKTMVMIGDGATDLEARKPGGAD  191 (224)
T ss_pred             CCCceEEEeCCHHHHHhhhcCCCC
Confidence            667789999999999998654333

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=99.29  E-value=1.8e-11  Score=97.20  Aligned_cols=75  Identities=15%  Similarity=0.155  Sum_probs=62.9

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHH------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRS------  178 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~------  178 (256)
                      ++|+|||||||+.+..         .+|.           ...+.+++++.+++++++|+.|+++|||+...+.      
T Consensus         2 K~i~~DiDGTL~~~~~---------~~y~-----------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i   61 (126)
T TIGR01689         2 KRLVMDLDNTITLTEN---------GDYA-----------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKI   61 (126)
T ss_pred             CEEEEeCCCCcccCCC---------Cccc-----------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhcccccc
Confidence            6899999999987421         0111           1467899999999999999999999999987765      


Q ss_pred             ------HHHHHHHhcCCCCcceEEEecC
Q 025203          179 ------YTVDNLIHVGYHGWASLELRGL  200 (256)
Q Consensus       179 ------~T~~~L~~~G~~~~~~lilr~~  200 (256)
                            .|.+||.+.|++ |++++++.+
T Consensus        62 ~~~~~~~t~~wL~k~~ip-Yd~l~~~kp   88 (126)
T TIGR01689        62 NIHTLPIIILWLNQHNVP-YDEIYVGKP   88 (126)
T ss_pred             chhhHHHHHHHHHHcCCC-CceEEeCCC
Confidence                  899999999999 899999984

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.29  E-value=2.6e-11  Score=101.96  Aligned_cols=106  Identities=11%  Similarity=-0.060  Sum_probs=68.5

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEEEecCCCCCchhh------hhhH-HHH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLELRGLEDEYKKVQ------QYKA-QVR  215 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~lilr~~~~~~kp~~------~~K~-~~r  215 (256)
                      ...+++||+.++++.|+++|++++++||.....   +...++++|+..+. ..+...+....+|.+      ..|. .++
T Consensus        77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~---~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~  153 (201)
T TIGR01491        77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCL---AKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVE  153 (201)
T ss_pred             HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHH
Confidence            356789999999999999999999999997543   56777888887543 223332221112221      1122 223


Q ss_pred             HHHHhcCC--cEEEEEcCCccccCCCC-CCCcEEEecCCC
Q 025203          216 KRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       216 ~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPnp~  252 (256)
                      +.+++.|.  +.+++|||+.+|+.++. +|..+..-|+|.
T Consensus       154 ~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~  193 (201)
T TIGR01491       154 RLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH  193 (201)
T ss_pred             HHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence            33344443  45899999999999875 565444447664

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.24  E-value=2.4e-11  Score=102.99  Aligned_cols=130  Identities=16%  Similarity=0.160  Sum_probs=78.6

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCC-----CHHHHHHHHH-------------------hcCCcchHHHHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERL-----NASSWEAWMK-------------------ESKAPALEHTLNLFHEIK  160 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~-----~~~~~~~wv~-------------------~~~~~~~pg~~ell~~L~  160 (256)
                      +.|+||+||||++..-......+|...-     +...|.+++.                   ....+++||+.++++.|+
T Consensus         2 ~~v~FD~DGTL~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~pg~~e~L~~L~   81 (205)
T PRK13582          2 EIVCLDLEGVLVPEIWIAFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIATLDPLPGAVEFLDWLR   81 (205)
T ss_pred             eEEEEeCCCCChhhHHHHHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence            6899999999997532211123442110     0011222221                   145678999999999999


Q ss_pred             HcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce--EEEecCC---CCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccc
Q 025203          161 NRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS--LELRGLE---DEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSS  235 (256)
Q Consensus       161 ~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~--lilr~~~---~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sD  235 (256)
                      ++ ++++++||.....   +...|+++|++.++.  +...+++   ...++.+..|....+.+...+ ..+++|||+.+|
T Consensus        82 ~~-~~~~IvS~~~~~~---~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~-~~~v~iGDs~~D  156 (205)
T PRK13582         82 ER-FQVVILSDTFYEF---AGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG-YRVIAAGDSYND  156 (205)
T ss_pred             hc-CCEEEEeCCcHHH---HHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhC-CeEEEEeCCHHH
Confidence            99 9999999997643   677888899876532  2221111   000122233434444444333 578999999999


Q ss_pred             cCCC
Q 025203          236 FEGL  239 (256)
Q Consensus       236 l~ga  239 (256)
                      +..+
T Consensus       157 ~~~~  160 (205)
T PRK13582        157 TTML  160 (205)
T ss_pred             HHHH
Confidence            8665

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.24  E-value=5.8e-11  Score=123.33  Aligned_cols=99  Identities=16%  Similarity=0.145  Sum_probs=75.3

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCC-CcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC-
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYH-GWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~-~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      .++||+.++|++|+++|++++++||.....   ....|+++|+. .++..++..++ ...||++.....   .+++.|. 
T Consensus       161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~---~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~---a~~~lgv~  234 (1057)
T PLN02919        161 IGFPGALELITQCKNKGLKVAVASSADRIK---VDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLA---AAKILGVP  234 (1057)
T ss_pred             ccCccHHHHHHHHHhCCCeEEEEeCCcHHH---HHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHH---HHHHcCcC
Confidence            479999999999999999999999987543   56778899986 55555555544 456888744433   3334443 


Q ss_pred             -cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 -RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 -~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                       ..+++|||+..|+++| .+|.+++.+...
T Consensus       235 p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~  264 (1057)
T PLN02919        235 TSECVVIEDALAGVQAARAAGMRCIAVTTT  264 (1057)
T ss_pred             cccEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence             4599999999999998 479999988653

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.23  E-value=1e-10  Score=97.24  Aligned_cols=99  Identities=15%  Similarity=0.096  Sum_probs=67.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCC----------C-------Cchh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED----------E-------YKKV  207 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~----------~-------~kp~  207 (256)
                      ..+++||+.++++.|+++|++++++||.....   ....+++.|+..++..++..+..          .       ..+.
T Consensus        70 ~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~---~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~  146 (188)
T TIGR01489        70 SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFF---IDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPC  146 (188)
T ss_pred             hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHH---HHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCC
Confidence            46899999999999999999999999987543   56667788887765444433210          0       0011


Q ss_pred             hhhhHHHHHHHHhcCCcEEEEEcCCccccCCCCCCCcEE
Q 025203          208 QQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTF  246 (256)
Q Consensus       208 ~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g~r~f  246 (256)
                      ...|..+.+.+....++.+++|||+.+|+.++.....+|
T Consensus       147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~  185 (188)
T TIGR01489       147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVF  185 (188)
T ss_pred             CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCccc
Confidence            123555555554321677999999999999986443433

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.22  E-value=9.5e-11  Score=100.41  Aligned_cols=140  Identities=19%  Similarity=0.152  Sum_probs=83.8

Q ss_pred             CCcEEEEecCCCccCChHHHHHh-ccCCC-------------CCC----------------HHHHHHHHHhcCCcchHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKH-GFGGE-------------RLN----------------ASSWEAWMKESKAPALEHT  152 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~-~~g~~-------------~~~----------------~~~~~~wv~~~~~~~~pg~  152 (256)
                      .+++++||+||||+++..+..-. .+|-+             ..+                .+.+.++.  ...+++||+
T Consensus        13 ~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~   90 (219)
T TIGR00338        13 SKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVR--ENLPLTEGA   90 (219)
T ss_pred             cCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHH--hcCCcCCCH
Confidence            46799999999999987543221 12210             011                01111221  346789999


Q ss_pred             HHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE-------ec----CCCCCchhhhhhHH-HHHHHHh
Q 025203          153 LNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL-------RG----LEDEYKKVQQYKAQ-VRKRLVK  220 (256)
Q Consensus       153 ~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil-------r~----~~~~~kp~~~~K~~-~r~~l~~  220 (256)
                      .++++.|+++|++++++||....   .....++..|+..++...+       .+    .....+|    |.. .++.+++
T Consensus        91 ~~~l~~l~~~g~~~~IvS~~~~~---~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----k~~~~~~~~~~  163 (219)
T TIGR00338        91 EELVKTLKEKGYKVAVISGGFDL---FAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASY----KGKTLLILLRK  163 (219)
T ss_pred             HHHHHHHHHCCCEEEEECCCcHH---HHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcc----cHHHHHHHHHH
Confidence            99999999999999999998643   3566677788876532111       10    0001111    222 2333344


Q ss_pred             cCC--cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          221 EGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       221 ~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .|.  +.+++|||+.+|+.++. +|..+..-|++
T Consensus       164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~  197 (219)
T TIGR00338       164 EGISPENTVAVGDGANDLSMIKAAGLGIAFNAKP  197 (219)
T ss_pred             cCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCH
Confidence            443  45889999999999874 56554433443

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.20  E-value=1.4e-11  Score=103.14  Aligned_cols=137  Identities=10%  Similarity=0.076  Sum_probs=89.2

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHH----HHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCC-CcccHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEA----WMKESKAPALEHTLNLFHEIKNRGVKIFLVSSR-RESLRS  178 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~----wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR-~~~~r~  178 (256)
                      ++.+|||+|+|+.+..-+.   .++ .++.+..-++    -.......++||+.++++.|+++|++++++||+ ...   
T Consensus         2 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~---   74 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMIS---LLG-GPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPE---   74 (174)
T ss_pred             CcEEEEeCCCCCcCccccc---ccC-CCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChH---
Confidence            5689999999999865221   111 1121100000    001134788999999999999999999999998 433   


Q ss_pred             HHHHHHHhcCCC---------CcceEEEecCCC-CCchhhhhhHHHHHHHHh-----cCCcEEEEEcCCccccCCC-CCC
Q 025203          179 YTVDNLIHVGYH---------GWASLELRGLED-EYKKVQQYKAQVRKRLVK-----EGYRIWGVVGDQWSSFEGL-PKP  242 (256)
Q Consensus       179 ~T~~~L~~~G~~---------~~~~lilr~~~~-~~kp~~~~K~~~r~~l~~-----~g~~i~~~iGD~~sDl~ga-~~g  242 (256)
                      .+...|..+|+.         .++..++..+.. +.||.+    .+.+.+.+     ...+.+++|||+..|+.++ .+|
T Consensus        75 ~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~----~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aG  150 (174)
T TIGR01685        75 WAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLE----MILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYG  150 (174)
T ss_pred             HHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHH----HHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhC
Confidence            356777888876         676666665432 222222    22233322     2245699999999999987 479


Q ss_pred             CcEEEecCC
Q 025203          243 KRTFKLPNS  251 (256)
Q Consensus       243 ~r~fklPnp  251 (256)
                      .+++-++..
T Consensus       151 i~~i~v~~g  159 (174)
T TIGR01685       151 VTSCYCPSG  159 (174)
T ss_pred             CEEEEcCCC
Confidence            999988754

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>smart00775 LNS2 LNS2 domain

Probab=99.20  E-value=2.2e-10  Score=94.34  Aligned_cols=127  Identities=19%  Similarity=0.224  Sum_probs=84.1

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      .|++||||||+++...      | .-.+        ..++....|++.+++++++++|++++++|||+..+...|.++|.
T Consensus         1 iVisDIDGTL~~sd~~------~-~~~~--------~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~   65 (157)
T smart00775        1 IVISDIDGTITKSDVL------G-HVVP--------IIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLS   65 (157)
T ss_pred             CEEEecCCCCcccccc------c-cccc--------ccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHH
Confidence            4899999999987521      0 0000        00123446999999999999999999999999988888889998


Q ss_pred             h-----cCCCCcceEEEecCCCC--------CchhhhhhHHHHHHHHh----cCCcEEEEEcCCccccCCCC----CCCc
Q 025203          186 H-----VGYHGWASLELRGLEDE--------YKKVQQYKAQVRKRLVK----EGYRIWGVVGDQWSSFEGLP----KPKR  244 (256)
Q Consensus       186 ~-----~G~~~~~~lilr~~~~~--------~kp~~~~K~~~r~~l~~----~g~~i~~~iGD~~sDl~ga~----~g~r  244 (256)
                      .     .+++. ..+++++....        .+..-.+|.+..+.+.+    .+..++..+||..+|+..-.    .-.|
T Consensus        66 ~~~~~~~~lp~-g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~  144 (157)
T smart00775       66 QIKQDGHNLPH-GPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSR  144 (157)
T ss_pred             HhhhccccCCC-ceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhh
Confidence            8     34652 35566554321        11112466555555554    35667888999999997631    2246


Q ss_pred             EEEe
Q 025203          245 TFKL  248 (256)
Q Consensus       245 ~fkl  248 (256)
                      +|.+
T Consensus       145 i~~i  148 (157)
T smart00775      145 IFTI  148 (157)
T ss_pred             EEEE
Confidence            6655

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.16  E-value=1.9e-10  Score=106.12  Aligned_cols=127  Identities=13%  Similarity=0.119  Sum_probs=87.4

Q ss_pred             CCcEEEEecCCCccCChH--HHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc------
Q 025203          103 GKDAWIFDVDDTLLSTIP--YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE------  174 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~--~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~------  174 (256)
                      ++++++||.||||+....  |+...                 ..+..++||+.++|++|+++|++++++||++.      
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~y~~~~-----------------~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~   63 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTDFQVDS-----------------LDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSF   63 (354)
T ss_pred             CCcEEEEeCCCCccCCCCccccccC-----------------cccceECcCHHHHHHHHHhCCCeEEEEECCccccCccc
Confidence            367999999999999642  21110                 12478999999999999999999999999621      


Q ss_pred             --c----cHHHHHHHHHhcCCCCcceEEEec-----CCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-C
Q 025203          175 --S----LRSYTVDNLIHVGYHGWASLELRG-----LEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-P  240 (256)
Q Consensus       175 --~----~r~~T~~~L~~~G~~~~~~lilr~-----~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~  240 (256)
                        .    .+..+.+.|++.|+. ++.++++.     +...+||.+..   +...++..+.  +.+++|||+.+|+.+| .
T Consensus        64 ~~~~l~~~~~~i~~iL~~~gl~-fd~i~i~~~~~sd~~~~rKP~p~~---l~~a~~~l~v~~~~svmIGDs~sDi~aAk~  139 (354)
T PRK05446         64 PQEDFDPPHNLMMQIFESQGIK-FDEVLICPHFPEDNCSCRKPKTGL---VEEYLAEGAIDLANSYVIGDRETDVQLAEN  139 (354)
T ss_pred             cHHHHhhHHHHHHHHHHHcCCc-eeeEEEeCCcCcccCCCCCCCHHH---HHHHHHHcCCCcccEEEEcCCHHHHHHHHH
Confidence              1    123456678888885 45555553     22345666532   2233333343  5699999999999988 5


Q ss_pred             CCCcEEEecCC
Q 025203          241 KPKRTFKLPNS  251 (256)
Q Consensus       241 ~g~r~fklPnp  251 (256)
                      +|.+++.+ ||
T Consensus       140 aGi~~I~v-~~  149 (354)
T PRK05446        140 MGIKGIRY-AR  149 (354)
T ss_pred             CCCeEEEE-EC
Confidence            89888876 44

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.13  E-value=2.1e-10  Score=91.15  Aligned_cols=111  Identities=14%  Similarity=0.108  Sum_probs=69.6

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCC-CcccHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSR-RESLRSYTVDN  183 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR-~~~~r~~T~~~  183 (256)
                      +.++||+||||++....         ..+...   =+..  .+++||+.++|+.|+++|++++++||+ +...   +...
T Consensus         1 kli~~DlD~Tl~~~~~~---------~~~~~~---~~~~--~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~---~~~~   63 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENI---------VVGEDP---IIDL--EVTIKEIRDKLQTLKKNGFLLALASYNDDPHV---AYEL   63 (128)
T ss_pred             CEEEEeCCCCCCCCCcc---------cccCCc---chhh--HHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHH---HHHH
Confidence            47899999999985310         000000   0000  168999999999999999999999999 5433   4555


Q ss_pred             HHhcC-------CCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--C--cEEEEEcCCccccCC
Q 025203          184 LIHVG-------YHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--Y--RIWGVVGDQWSSFEG  238 (256)
Q Consensus       184 L~~~G-------~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~--~i~~~iGD~~sDl~g  238 (256)
                      |+..|       +..++..+..++.   +|.+.   .....++..|  .  ..+++|||+..++..
T Consensus        64 l~~~~~~~~i~~l~~~f~~~~~~~~---~pkp~---~~~~a~~~lg~~~~p~~~l~igDs~~n~~~  123 (128)
T TIGR01681        64 LKIFEDFGIIFPLAEYFDPLTIGYW---LPKSP---RLVEIALKLNGVLKPKSILFVDDRPDNNEE  123 (128)
T ss_pred             HHhccccccchhhHhhhhhhhhcCC---CcHHH---HHHHHHHHhcCCCCcceEEEECCCHhHHHH
Confidence            66666       4444444444322   23332   2233444445  4  459999999988653

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.11  E-value=7.3e-10  Score=95.03  Aligned_cols=101  Identities=15%  Similarity=0.096  Sum_probs=75.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceE-EEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASL-ELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~l-ilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++|+++++|+.++++ ++++++||-...   .....|++.|+..+++. +..++....||++..+..   .++..|.
T Consensus        97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~---~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~---~~~~~g~  169 (229)
T COG1011          97 LLPDYPEALEALKELGKK-YKLGILTNGARP---HQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEY---ALEKLGV  169 (229)
T ss_pred             hCccChhHHHHHHHHHhh-ccEEEEeCCChH---HHHHHHHHcCChhhhheEEEecccccCCCCcHHHHH---HHHHcCC
Confidence            378999999999999999 999999996432   36888999998877554 444444567888865543   3344454


Q ss_pred             --cEEEEEcCCc-cccCCC-CCCCcEEEecCCC
Q 025203          224 --RIWGVVGDQW-SSFEGL-PKPKRTFKLPNSM  252 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga-~~g~r~fklPnp~  252 (256)
                        +.+++|||+. +|+.|| .+|.+++-+..+.
T Consensus       170 ~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         170 PPEEALFVGDSLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             CcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence              4699999997 786776 5899987765544

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.10  E-value=4.6e-10  Score=97.26  Aligned_cols=147  Identities=17%  Similarity=0.148  Sum_probs=98.6

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhc------cCCCCCC-------------------------HHHHHHHHHh-------
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHG------FGGERLN-------------------------ASSWEAWMKE-------  143 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~------~g~~~~~-------------------------~~~~~~wv~~-------  143 (256)
                      .+..+++||+|||++|+...|....      ||. +|+                         +-++.++..+       
T Consensus         8 ~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk-~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~   86 (222)
T KOG2914|consen    8 LKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGK-PYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDR   86 (222)
T ss_pred             cceeeEEEecCCcEEecHHHHHHHHHHHHHHcCC-CChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence            3567999999999999998887642      231 221                         1222333221       


Q ss_pred             --cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC-cceEEEec--CCCCCchhhhhhHHHHHHH
Q 025203          144 --SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG-WASLELRG--LEDEYKKVQQYKAQVRKRL  218 (256)
Q Consensus       144 --~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~-~~~lilr~--~~~~~kp~~~~K~~~r~~l  218 (256)
                        .....+||+.+|++.|+.+|+++.++|++++...+.-..+++.  +-. +.+.++.+  +-..+||+|......++.+
T Consensus        87 ~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~--~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l  164 (222)
T KOG2914|consen   87 LFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHED--IFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRL  164 (222)
T ss_pred             hccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhH--HHHhcCCCeecCCccccCCCCCchHHHHHHHhc
Confidence              4678899999999999999999999999987765444444331  222 33444422  2256788885443333333


Q ss_pred             HhcCCcEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          219 VKEGYRIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       219 ~~~g~~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      ......-+++++|++..++++ .+|++++.+|++
T Consensus       165 ~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~  198 (222)
T KOG2914|consen  165 GVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATP  198 (222)
T ss_pred             CCCCccceEEECCCHHHHHHHHhcCCeEEEecCC
Confidence            222225599999999999998 489999999983

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.10  E-value=1e-10  Score=95.81  Aligned_cols=115  Identities=17%  Similarity=0.198  Sum_probs=72.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      ++++||+||||+++..++...+   + +    .      ..--..++.  .+++|+++|++++++||++...   +...+
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~---~-~----~------~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~---~~~~l   62 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIYYTNNG---E-E----I------KAFNVRDGY--GIRCALKSGIEVAIITGRKAKL---VEDRC   62 (154)
T ss_pred             eEEEEeCceeEEcCeEEECCCC---c-E----E------EEEechhHH--HHHHHHHCCCEEEEEECCCCHH---HHHHH
Confidence            6899999999999765432210   0 0    0      000011222  7999999999999999998654   67788


Q ss_pred             HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          185 IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       185 ~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      +++|+..++.    .  ...|  +.   ...+.+++.|  .+.+++|||+.+|+.++. +|. .|.+.|
T Consensus        63 ~~~gi~~~~~----~--~~~k--~~---~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~-~~~v~~  119 (154)
T TIGR01670        63 KTLGITHLYQ----G--QSNK--LI---AFSDILEKLALAPENVAYIGDDLIDWPVMEKVGL-SVAVAD  119 (154)
T ss_pred             HHcCCCEEEe----c--ccch--HH---HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC-eEecCC
Confidence            9999875432    1  1222  22   2233334444  346999999999999874 454 355544

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=99.09  E-value=6.5e-10  Score=92.12  Aligned_cols=144  Identities=23%  Similarity=0.267  Sum_probs=96.7

Q ss_pred             cCCCCCcEEEEecCCCccCChHHHHHhccCCCCCC---------HHHHHHHHHhc---CCcchHHHHHHHHHHHHcCCeE
Q 025203           99 LAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLN---------ASSWEAWMKES---KAPALEHTLNLFHEIKNRGVKI  166 (256)
Q Consensus        99 ~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~---------~~~~~~wv~~~---~~~~~pg~~ell~~L~~~G~~i  166 (256)
                      +.|..+-+|-||||+|+|-++|+|-   .|.+.|+         +..|++ |..+   -.-|-+=+.+|++.-+++|-+|
T Consensus        58 LeG~~Pi~VsFDIDDTvLFsSp~F~---~Gk~~~sPgs~DyLknq~FW~~-vn~g~D~~SIPKevA~qLI~MHq~RGD~i  133 (237)
T COG3700          58 LEGRPPIAVSFDIDDTVLFSSPGFW---RGKKYFSPGSEDYLKNQVFWEK-VNNGWDEFSIPKEVARQLIDMHQRRGDAI  133 (237)
T ss_pred             hcCCCCeeEeeccCCeeEecccccc---cCccccCCChHHhhcCHHHHHH-HhcCCccccchHHHHHHHHHHHHhcCCeE
Confidence            3456678999999999999999873   3433333         334544 3332   2446677899999999999999


Q ss_pred             EEEeCCCcccHHHHHHHHH-hcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCC----C
Q 025203          167 FLVSSRRESLRSYTVDNLI-HVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP----K  241 (256)
Q Consensus       167 ~ivTnR~~~~r~~T~~~L~-~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~----~  241 (256)
                      +|+|||+....+.+.+.|. ++.+.....++..++..  ||..-.|   -..+++.+  +.+..||+.+|+.+++    .
T Consensus       134 ~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~--k~~qy~K---t~~i~~~~--~~IhYGDSD~Di~AAkeaG~R  206 (237)
T COG3700         134 YFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP--KPGQYTK---TQWIQDKN--IRIHYGDSDNDITAAKEAGAR  206 (237)
T ss_pred             EEEecCCCCcccccchhHHhhcccCCCcceeeccCCC--Ccccccc---cHHHHhcC--ceEEecCCchhhhHHHhcCcc
Confidence            9999999876666667774 35565545556655432  3322222   23455544  5567999999999874    4


Q ss_pred             CCcEEEecCCCC
Q 025203          242 PKRTFKLPNSMY  253 (256)
Q Consensus       242 g~r~fklPnp~Y  253 (256)
                      |.|...-||..|
T Consensus       207 gIRilRAaNSTy  218 (237)
T COG3700         207 GIRILRAANSTY  218 (237)
T ss_pred             ceeEEecCCccC
Confidence            555556688877

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=99.09  E-value=5.5e-10  Score=91.61  Aligned_cols=126  Identities=16%  Similarity=0.164  Sum_probs=89.6

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      .||+|||||+..|.-.  .+.+.             ..++...-||+.+++++++++|+++.++|+|+..+...|..+|.
T Consensus         1 VVvsDIDGTiT~SD~~--G~i~~-------------~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~   65 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVL--GHILP-------------ILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLA   65 (157)
T ss_pred             CEEEeccCCcCccchh--hhhhh-------------ccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHH
Confidence            4899999999998521  00000             01223456999999999999999999999999999999999999


Q ss_pred             hc-----CCCCcceEEEecCC---------CCCchhhhhhHHHHHHHHhc----CCcEEEEEcCCccccCCCC----CCC
Q 025203          186 HV-----GYHGWASLELRGLE---------DEYKKVQQYKAQVRKRLVKE----GYRIWGVVGDQWSSFEGLP----KPK  243 (256)
Q Consensus       186 ~~-----G~~~~~~lilr~~~---------~~~kp~~~~K~~~r~~l~~~----g~~i~~~iGD~~sDl~ga~----~g~  243 (256)
                      +.     ++|. -.+++.++.         -..+| ..||....+.++..    +-.+..-+|+..+|+.+-.    .-.
T Consensus        66 ~~~q~~~~lP~-Gpv~~sP~~l~~al~rEvi~~~p-~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~  143 (157)
T PF08235_consen   66 QHQQQGHNLPD-GPVLLSPDSLFSALHREVISKDP-EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKS  143 (157)
T ss_pred             HHHhCCccCCC-CCEEECCcchhhhhhccccccCh-HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChh
Confidence            88     7873 445555322         11222 36887777777765    6667889999999997632    234


Q ss_pred             cEEEe
Q 025203          244 RTFKL  248 (256)
Q Consensus       244 r~fkl  248 (256)
                      |+|.+
T Consensus       144 rIF~I  148 (157)
T PF08235_consen  144 RIFII  148 (157)
T ss_pred             hEEEE
Confidence            66665

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.08  E-value=6.3e-10  Score=92.59  Aligned_cols=110  Identities=20%  Similarity=0.168  Sum_probs=78.3

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .+.+++++|+|||++...                         ...++|++.++|+.|+++|++++++||.+...  ...
T Consensus        23 ~~v~~vv~D~Dgtl~~~~-------------------------~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~--~~~   75 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPD-------------------------HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQ--RAK   75 (170)
T ss_pred             CCCCEEEEecCCccccCC-------------------------CCCcChhHHHHHHHHHHcCCEEEEEeCCchHH--HHH
Confidence            467899999999998732                         24678999999999999999999999987322  234


Q ss_pred             HHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCc-cccCCC-CCCCcEEEec
Q 025203          182 DNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQW-SSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       182 ~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~-sDl~ga-~~g~r~fklP  249 (256)
                      ..++..|+..+.        ...||.+...   ...+++.|.  ..+++|||+. +|+.+| .+|.+++.+.
T Consensus        76 ~~~~~~gl~~~~--------~~~KP~p~~~---~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~  136 (170)
T TIGR01668        76 AVEKALGIPVLP--------HAVKPPGCAF---RRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE  136 (170)
T ss_pred             HHHHHcCCEEEc--------CCCCCChHHH---HHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence            445666764211        1235655332   233444444  3599999998 799998 4788888773

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=99.08  E-value=8.9e-10  Score=84.19  Aligned_cols=58  Identities=16%  Similarity=0.367  Sum_probs=50.3

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH  186 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~  186 (256)
                      ++||+||||...                           ..++||+.+++++|+++|.+++|+||.+...++...+.|++
T Consensus         1 ~l~D~dGvl~~g---------------------------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~   53 (101)
T PF13344_consen    1 FLFDLDGVLYNG---------------------------NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK   53 (101)
T ss_dssp             EEEESTTTSEET---------------------------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred             CEEeCccEeEeC---------------------------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence            689999999982                           46899999999999999999999999999888899999999


Q ss_pred             cCCCC
Q 025203          187 VGYHG  191 (256)
Q Consensus       187 ~G~~~  191 (256)
                      +|++.
T Consensus        54 ~Gi~~   58 (101)
T PF13344_consen   54 LGIPV   58 (101)
T ss_dssp             TTTT-
T ss_pred             cCcCC
Confidence            99984

...

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.07  E-value=6.1e-10  Score=95.98  Aligned_cols=132  Identities=14%  Similarity=0.098  Sum_probs=79.1

Q ss_pred             CcEEEEecCCCccCChHHHHH-hccCCC--------------CC-----------CHHHHHHHHH--hcCCcchHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKK-HGFGGE--------------RL-----------NASSWEAWMK--ESKAPALEHTLNL  155 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~-~~~g~~--------------~~-----------~~~~~~~wv~--~~~~~~~pg~~el  155 (256)
                      +.+++||.||||++......- ..++..              .+           .....++..+  ....+++||+.++
T Consensus         3 ~~~vifDfDgTi~~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~pG~~e~   82 (219)
T PRK09552          3 SIQIFCDFDGTITNNDNIIAIMKKFAPPEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLETAEIREGFHEF   82 (219)
T ss_pred             CcEEEEcCCCCCCcchhhHHHHHHhCHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhCCCcCcCHHHH
Confidence            458999999999998876531 123210              00           0001111111  1457899999999


Q ss_pred             HHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC--cc--eEEEecCC-CCCchhhh----------hhHHHHHHHHh
Q 025203          156 FHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG--WA--SLELRGLE-DEYKKVQQ----------YKAQVRKRLVK  220 (256)
Q Consensus       156 l~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~--~~--~lilr~~~-~~~kp~~~----------~K~~~r~~l~~  220 (256)
                      ++.|+++|++++++||.....   +...|++. +..  +.  ...+.++. ...||.+.          -|....+.+..
T Consensus        83 l~~l~~~g~~~~IvS~~~~~~---i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~  158 (219)
T PRK09552         83 VQFVKENNIPFYVVSGGMDFF---VYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSD  158 (219)
T ss_pred             HHHHHHcCCeEEEECCCcHHH---HHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhcc
Confidence            999999999999999997543   56666666 542  11  22222221 12233332          13333333322


Q ss_pred             cCCcEEEEEcCCccccCCCC
Q 025203          221 EGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       221 ~g~~i~~~iGD~~sDl~ga~  240 (256)
                       ....+++|||+.+|+.++.
T Consensus       159 -~~~~~i~iGDs~~Di~aa~  177 (219)
T PRK09552        159 -TNDFHIVIGDSITDLEAAK  177 (219)
T ss_pred             -CCCCEEEEeCCHHHHHHHH
Confidence             2345889999999999875

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.07  E-value=9.6e-11  Score=97.66  Aligned_cols=118  Identities=11%  Similarity=0.113  Sum_probs=79.2

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+++|||+|||+.|..-++...+-....|+.              ..|  .-++.|+++|++++++||++...   +...
T Consensus         7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~--------------~D~--~~~~~L~~~Gi~laIiT~k~~~~---~~~~   67 (169)
T TIGR02726         7 IKLVILDVDGVMTDGRIVINDEGIESRNFDI--------------KDG--MGVIVLQLCGIDVAIITSKKSGA---VRHR   67 (169)
T ss_pred             CeEEEEeCceeeECCeEEEcCCCcEEEEEec--------------chH--HHHHHHHHCCCEEEEEECCCcHH---HHHH
Confidence            6899999999999988666544322122321              122  23667889999999999998654   7788


Q ss_pred             HHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEecCC
Q 025203          184 LIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       184 L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklPnp  251 (256)
                      |+++|+..++..+        ||.+.   .++..++..|.  +.+++|||+.+|+.++......|..+|.
T Consensus        68 l~~lgi~~~f~~~--------kpkp~---~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA  126 (169)
T TIGR02726        68 AEELKIKRFHEGI--------KKKTE---PYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDA  126 (169)
T ss_pred             HHHCCCcEEEecC--------CCCHH---HHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCc
Confidence            8999998654321        22232   23344455554  4599999999999987544456666653

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PLN02811 hydrolase

Probab=99.07  E-value=7.3e-10  Score=95.50  Aligned_cols=102  Identities=12%  Similarity=0.077  Sum_probs=72.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC--C-CCCchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL--E-DEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~--~-~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ..+++||+.++|+.|+++|++++++||.....  .....++..|+..+++.++..+  + ...||++...   ...+++.
T Consensus        76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~--~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~---~~a~~~~  150 (220)
T PLN02811         76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRH--FDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIF---LAAARRF  150 (220)
T ss_pred             hCCCCccHHHHHHHHHHCCCcEEEEeCCchhh--HHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHH---HHHHHHh
Confidence            56789999999999999999999999987542  1233333446655665566555  3 3467777433   2333333


Q ss_pred             C-----CcEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          222 G-----YRIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       222 g-----~~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      |     ...+++|||+..|+++| .+|.+++-++++
T Consensus       151 ~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~  186 (220)
T PLN02811        151 EDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDP  186 (220)
T ss_pred             CCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence            3     35699999999999998 479999988654

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.03  E-value=2.3e-10  Score=94.59  Aligned_cols=83  Identities=10%  Similarity=-0.010  Sum_probs=60.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++|+       +++++||.+...   ....|++.|+..+++.++..+. ...||++....   ..+++.|.
T Consensus        88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~---~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~---~~~~~~~~  154 (175)
T TIGR01493        88 NLPPWPDSAAALA-------RVAILSNASHWA---FDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYE---LVFDTVGL  154 (175)
T ss_pred             cCCCCCchHHHHH-------HHhhhhCCCHHH---HHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHH---HHHHHHCC
Confidence            4678999999998       378999987543   4667888999877665565554 56788885443   33334454


Q ss_pred             --cEEEEEcCCccccCCCC
Q 025203          224 --RIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~  240 (256)
                        ..+++|||+..|+.||.
T Consensus       155 ~p~~~l~vgD~~~Di~~A~  173 (175)
T TIGR01493       155 PPDRVLMVAAHQWDLIGAR  173 (175)
T ss_pred             CHHHeEeEecChhhHHHHh
Confidence              45999999999999875

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.99  E-value=4.6e-10  Score=91.31  Aligned_cols=127  Identities=13%  Similarity=0.044  Sum_probs=78.7

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCC-HHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLN-ASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      ++..+|+|+||||+.+..--. .....+.+. .....+-.......++||+.++|+.|+ +|++++++|+.+...   +.
T Consensus         1 ~k~~lvldld~tl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~---~~   75 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSF-KEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMY---AD   75 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcC-CCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHH---HH
Confidence            357899999999999752000 000000000 000000000123578999999999998 679999999998654   56


Q ss_pred             HHHHhcCCCC-cceEEE-ecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCC
Q 025203          182 DNLIHVGYHG-WASLEL-RGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       182 ~~L~~~G~~~-~~~lil-r~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~  240 (256)
                      ..|++.|+.. ++..++ +++....||.  |.    +.++..|  .+.+++|||+..|+.+++
T Consensus        76 ~il~~l~~~~~~f~~i~~~~d~~~~KP~--~~----k~l~~l~~~p~~~i~i~Ds~~~~~aa~  132 (148)
T smart00577       76 PVLDLLDPKKYFGYRRLFRDECVFVKGK--YV----KDLSLLGRDLSNVIIIDDSPDSWPFHP  132 (148)
T ss_pred             HHHHHhCcCCCEeeeEEECccccccCCe--Ee----ecHHHcCCChhcEEEEECCHHHhhcCc
Confidence            6677778753 434444 4444556665  32    3344444  456999999999999885

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.97  E-value=2.1e-09  Score=103.86  Aligned_cols=119  Identities=13%  Similarity=0.034  Sum_probs=79.9

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc-----
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-----  176 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~-----  176 (256)
                      ...++++||+||||+.+....      ..+.+++.|        ..++||+.+.|+.|+++|++|+|+||.+...     
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg~------~~~~~~~d~--------~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~  231 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSGK------VFPKGPDDW--------QIIFPEIPEKLKELEADGFKICIFTNQGGIARGKIN  231 (526)
T ss_pred             ccCcEEEEECCCCccccCCCc------cCCCCHHHe--------eecccCHHHHHHHHHHCCCEEEEEECCcccccCccc
Confidence            346899999999999764210      011234444        2357999999999999999999999987621     


Q ss_pred             ----HHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhc------CCcEEEEEcCCccccCCC
Q 025203          177 ----RSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKE------GYRIWGVVGDQWSSFEGL  239 (256)
Q Consensus       177 ----r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~------g~~i~~~iGD~~sDl~ga  239 (256)
                          ...+...|+++|++ ++ ++...+. ..+||.+..   ....++..      ...-+++|||...|+.++
T Consensus       232 ~~~~~~ki~~iL~~lgip-fd-viia~~~~~~RKP~pGm---~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g  300 (526)
T TIGR01663       232 ADDFKAKIEAIVAKLGVP-FQ-VFIAIGAGFYRKPLTGM---WDHLKEEANDGTEIQEDDCFFVGDAAGRPANG  300 (526)
T ss_pred             HHHHHHHHHHHHHHcCCc-eE-EEEeCCCCCCCCCCHHH---HHHHHHhcCcccCCCHHHeEEeCCcccchHHH
Confidence                23466778889987 44 5555443 456776633   22333332      223589999999998653

Note that the EC number for the kinase function is: 2.7.1.78

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.93  E-value=8.6e-10  Score=92.85  Aligned_cols=112  Identities=16%  Similarity=0.202  Sum_probs=72.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++++||+||||+++.-++....-....|+     .         ..  ...++.|+++|++++++|||+...   +..
T Consensus        20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~-----~---------~d--~~~i~~L~~~Gi~v~I~T~~~~~~---v~~   80 (183)
T PRK09484         20 NIRLLICDVDGVFSDGLIYMGNNGEELKAFN-----V---------RD--GYGIRCLLTSGIEVAIITGRKSKL---VED   80 (183)
T ss_pred             CceEEEEcCCeeeecCEEEEcCCCCEEEEEe-----c---------cc--hHHHHHHHHCCCEEEEEeCCCcHH---HHH
Confidence            5889999999999997432211100000111     0         01  135677888999999999997643   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCc
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKR  244 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r  244 (256)
                      .++++|+..++.    +  ...|+     ..+.+.+++.|.  +.+++|||+.+|+.++. +|..
T Consensus        81 ~l~~lgl~~~f~----g--~~~k~-----~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~  134 (183)
T PRK09484         81 RMTTLGITHLYQ----G--QSNKL-----IAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS  134 (183)
T ss_pred             HHHHcCCceeec----C--CCcHH-----HHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence            888889875432    1  12222     334455555564  46999999999999874 5665

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=98.92  E-value=7.5e-09  Score=87.44  Aligned_cols=103  Identities=18%  Similarity=0.032  Sum_probs=68.1

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce--EEEecCC-CCCchh-----hhhhH-HHHH
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS--LELRGLE-DEYKKV-----QQYKA-QVRK  216 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~--lilr~~~-~~~kp~-----~~~K~-~~r~  216 (256)
                      ..++|++.++++.++++|++++++|+.++..   ....++..|++.+..  +....++ ..+++.     ...|. .+++
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~---v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~  162 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTIL---VKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE  162 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence            4689999999999999999999999998654   455667788876422  2221211 111111     12232 2344


Q ss_pred             HHHhcCCc--EEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          217 RLVKEGYR--IWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       217 ~l~~~g~~--i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .+.+.+.+  .+.++||+.+|+.... +|..+..-|+|
T Consensus       163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~  200 (202)
T TIGR01490       163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPDK  200 (202)
T ss_pred             HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCCC
Confidence            44455553  6889999999999864 67777777776

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.91  E-value=6.1e-09  Score=91.19  Aligned_cols=102  Identities=11%  Similarity=0.138  Sum_probs=72.6

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      +..++++||+|||+.+.                           ..++||+.+++++|+++|++++|+||++.. +....
T Consensus         6 ~~~~~~~~D~dG~l~~~---------------------------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~   57 (242)
T TIGR01459         6 NDYDVFLLDLWGVIIDG---------------------------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLH   57 (242)
T ss_pred             hcCCEEEEecccccccC---------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHH
Confidence            34679999999999883                           346899999999999999999999997654 33344


Q ss_pred             HHHHhcCCCC-cceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCC
Q 025203          182 DNLIHVGYHG-WASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEG  238 (256)
Q Consensus       182 ~~L~~~G~~~-~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~g  238 (256)
                      +.|+++|++. +++.++.+....    .   ..++..+++.|.  +.+.+|||+..|+..
T Consensus        58 ~~L~~~gl~~~~~~~Ii~s~~~~----~---~~l~~~~~~~~~~~~~~~~vGd~~~d~~~  110 (242)
T TIGR01459        58 KTLKSLGINADLPEMIISSGEIA----V---QMILESKKRFDIRNGIIYLLGHLENDIIN  110 (242)
T ss_pred             HHHHHCCCCccccceEEccHHHH----H---HHHHhhhhhccCCCceEEEeCCcccchhh
Confidence            7899999986 666666653210    0   122233333333  458899998877753

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.90  E-value=1.1e-08  Score=87.65  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=64.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc--eEEEecCC-CCCc--hhhhhhHHHHHHHH
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA--SLELRGLE-DEYK--KVQQYKAQVRKRLV  219 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--~lilr~~~-~~~k--p~~~~K~~~r~~l~  219 (256)
                      ..+++||+.++++.++++| +++++||....   .+...++++|++.+.  ++...+.+ ..+.  ..+..|....+.++
T Consensus        66 ~i~l~pga~ell~~lk~~~-~~~IVS~~~~~---~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~  141 (203)
T TIGR02137        66 TLKPLEGAVEFVDWLRERF-QVVILSDTFYE---FSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK  141 (203)
T ss_pred             hCCCCccHHHHHHHHHhCC-eEEEEeCChHH---HHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH
Confidence            4578999999999999985 99999999754   367788889998653  24433211 0110  11233455555665


Q ss_pred             hcCCcEEEEEcCCccccCCCC-CCCcE
Q 025203          220 KEGYRIWGVVGDQWSSFEGLP-KPKRT  245 (256)
Q Consensus       220 ~~g~~i~~~iGD~~sDl~ga~-~g~r~  245 (256)
                      +.|. .+++|||+.+|+.... +|..+
T Consensus       142 ~~~~-~~v~vGDs~nDl~ml~~Ag~~i  167 (203)
T TIGR02137       142 SLYY-RVIAAGDSYNDTTMLSEAHAGI  167 (203)
T ss_pred             hhCC-CEEEEeCCHHHHHHHHhCCCCE
Confidence            5554 5789999999998753 34333

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.90  E-value=2.5e-08  Score=91.22  Aligned_cols=99  Identities=14%  Similarity=0.089  Sum_probs=63.2

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc--eEEE-----ec----CCCCCchhhhhhH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA--SLEL-----RG----LEDEYKKVQQYKA  212 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--~lil-----r~----~~~~~kp~~~~K~  212 (256)
                      ...+++||+.++++.|+++|++++++||.....   +...++++|++...  .+-.     .+    +....    ..|.
T Consensus       178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~---~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~----k~K~  250 (322)
T PRK11133        178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYF---ADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDA----QYKA  250 (322)
T ss_pred             HhCCCChhHHHHHHHHHHcCCEEEEEECCcchh---HHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCc----ccHH
Confidence            357899999999999999999999999987644   44555667876421  1111     11    10111    1233


Q ss_pred             H-HHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          213 Q-VRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       213 ~-~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      . +++.+++.|.  +.+++|||+.+|+..+. +| ..+.+ |+
T Consensus       251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AG-lgiA~-nA  291 (322)
T PRK11133        251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAG-LGIAY-HA  291 (322)
T ss_pred             HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCC-CeEEe-CC
Confidence            3 2333345564  46999999999999864 45 44444 54

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.87  E-value=1.5e-08  Score=83.51  Aligned_cols=93  Identities=19%  Similarity=0.166  Sum_probs=60.4

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce--EEEecCC-----CCC--chhhhhhHHH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS--LELRGLE-----DEY--KKVQQYKAQV  214 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~--lilr~~~-----~~~--kp~~~~K~~~  214 (256)
                      ...++.||+.++++.++++|++++++|+....   .+...++++|+..+..  +....++     ...  .+...-|...
T Consensus        70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~---~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~  146 (177)
T TIGR01488        70 RQVALRPGARELISWLKERGIDTVIVSGGFDF---FVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKV  146 (177)
T ss_pred             hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHH
Confidence            45667899999999999999999999998754   3677778888875422  1111110     001  1122334443


Q ss_pred             HHHH-HhcC--CcEEEEEcCCccccCCC
Q 025203          215 RKRL-VKEG--YRIWGVVGDQWSSFEGL  239 (256)
Q Consensus       215 r~~l-~~~g--~~i~~~iGD~~sDl~ga  239 (256)
                      .+.+ .+.|  +..+++|||+.+|+..+
T Consensus       147 l~~~~~~~~~~~~~~~~iGDs~~D~~~~  174 (177)
T TIGR01488       147 LKELLEESKITLKKIIAVGDSVNDLPML  174 (177)
T ss_pred             HHHHHHHhCCCHHHEEEEeCCHHHHHHH
Confidence            3333 3333  45589999999998764

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR01684 viral_ppase viral phosphatase

Probab=98.84  E-value=1e-08  Score=91.81  Aligned_cols=73  Identities=19%  Similarity=0.293  Sum_probs=58.6

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcch-HHHHHHHHHHHHcCCeEEEEeCCCcccHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPAL-EHTLNLFHEIKNRGVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~-pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T  180 (256)
                      .-++.|+||+||||++...                        +...- ||+.++|++|+++|++++++|++....   .
T Consensus       124 ~~~kvIvFDLDgTLi~~~~------------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~---v  176 (301)
T TIGR01684       124 EPPHVVVFDLDSTLITDEE------------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDH---V  176 (301)
T ss_pred             ccceEEEEecCCCCcCCCC------------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHH---H
Confidence            3478999999999999641                        13233 999999999999999999999987543   5


Q ss_pred             HHHHHhcCCCCcceEEEecCC
Q 025203          181 VDNLIHVGYHGWASLELRGLE  201 (256)
Q Consensus       181 ~~~L~~~G~~~~~~lilr~~~  201 (256)
                      .+.|++.|+..+++.++.+.+
T Consensus       177 ~~~L~~lGLd~YFdvIIs~Gd  197 (301)
T TIGR01684       177 VESMRKVKLDRYFDIIISGGH  197 (301)
T ss_pred             HHHHHHcCCCcccCEEEECCc
Confidence            688999999988766666543

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PLN02645 phosphoglycolate phosphatase

Probab=98.84  E-value=1.3e-08  Score=92.66  Aligned_cols=70  Identities=14%  Similarity=0.215  Sum_probs=58.8

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..++++||+||||++..                           .++||+.+++++|+++|++++|+|||+...+....+
T Consensus        27 ~~~~~~~D~DGtl~~~~---------------------------~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~   79 (311)
T PLN02645         27 SVETFIFDCDGVIWKGD---------------------------KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGK   79 (311)
T ss_pred             hCCEEEEeCcCCeEeCC---------------------------ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHH
Confidence            46899999999999842                           367999999999999999999999999888888888


Q ss_pred             HHHhcCCCCcceEEEec
Q 025203          183 NLIHVGYHGWASLELRG  199 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~  199 (256)
                      .|+++|++...+.++.+
T Consensus        80 ~l~~lGi~~~~~~I~ts   96 (311)
T PLN02645         80 KFESLGLNVTEEEIFSS   96 (311)
T ss_pred             HHHHCCCCCChhhEeeh
Confidence            99999998544444443

>TIGR01686 FkbH FkbH-like domain

Probab=98.83  E-value=1e-08  Score=93.55  Aligned_cols=113  Identities=14%  Similarity=0.128  Sum_probs=77.4

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      .++++|+|+|+||....-  ...+  ...           -.-..++|++.++++.|+++|++++++|++++.   .+.+
T Consensus         2 ~~k~~v~DlDnTlw~gv~--~e~g--~~~-----------i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~---~a~~   63 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVL--GEDG--IDN-----------LNLSPLHKTLQEKIKTLKKQGFLLALASKNDED---DAKK   63 (320)
T ss_pred             CeEEEEEcCCCCCCCCEE--ccCC--ccc-----------cccCccHHHHHHHHHHHHhCCCEEEEEcCCCHH---HHHH
Confidence            368999999999997430  0000  000           011356899999999999999999999999864   3677


Q ss_pred             HHHh----cCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhc--CCcEEEEEcCCccccCCCC
Q 025203          183 NLIH----VGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKE--GYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       183 ~L~~----~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~--g~~i~~~iGD~~sDl~ga~  240 (256)
                      .|++    +|...++..+...    .||.+.   .+++.+++.  +.+-+++|||+..|+.++.
T Consensus        64 ~l~~~~~~~~~~~~f~~~~~~----~~pk~~---~i~~~~~~l~i~~~~~vfidD~~~d~~~~~  120 (320)
T TIGR01686        64 VFERRKDFILQAEDFDARSIN----WGPKSE---SLRKIAKKLNLGTDSFLFIDDNPAERANVK  120 (320)
T ss_pred             HHHhCccccCcHHHeeEEEEe----cCchHH---HHHHHHHHhCCCcCcEEEECCCHHHHHHHH
Confidence            7887    7777666554333    234342   233444444  4567999999999999875

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.79  E-value=3.8e-08  Score=84.52  Aligned_cols=98  Identities=13%  Similarity=0.099  Sum_probs=61.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc---ceEEEecCC-CCCchhhh----------h
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW---ASLELRGLE-DEYKKVQQ----------Y  210 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~---~~lilr~~~-~~~kp~~~----------~  210 (256)
                      ..++.||+.++++.|+++|++++++|+.....   ....|+.++....   ..+...+.. ...+|.+.          -
T Consensus        68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~---i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~  144 (214)
T TIGR03333        68 TAEIREGFREFVAFINEHGIPFYVISGGMDFF---VYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCC  144 (214)
T ss_pred             cCcccccHHHHHHHHHHCCCeEEEECCCcHHH---HHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCC
Confidence            57899999999999999999999999997544   4555665533221   123333221 12223221          2


Q ss_pred             hHHHHHHHHhcCCcEEEEEcCCccccCCCCCCCcEE
Q 025203          211 KAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTF  246 (256)
Q Consensus       211 K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g~r~f  246 (256)
                      |..+.+.+.. ..+.+++|||+.+|+.++..+..+|
T Consensus       145 K~~~l~~~~~-~~~~~i~iGDg~~D~~~a~~Ad~~~  179 (214)
T TIGR03333       145 KPSLIRKLSE-PNDYHIVIGDSVTDVEAAKQSDLCF  179 (214)
T ss_pred             HHHHHHHHhh-cCCcEEEEeCCHHHHHHHHhCCeeE
Confidence            3444444433 3345789999999999875433343

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=98.79  E-value=3.7e-08  Score=82.73  Aligned_cols=124  Identities=15%  Similarity=0.144  Sum_probs=83.3

Q ss_pred             CcEEEEecCCCccCChH-HHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc------
Q 025203          104 KDAWIFDVDDTLLSTIP-YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL------  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~-~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~------  176 (256)
                      .+++++|-||||..-.+ |.            .++++|      ...||+.+.+..|++.|++++++||.+.--      
T Consensus         5 ~k~lflDRDGtin~d~~~yv------------~~~~~~------~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~   66 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYV------------DSLDDF------QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTE   66 (181)
T ss_pred             CcEEEEcCCCceecCCCccc------------CcHHHh------ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccH
Confidence            68999999999988654 21            123332      467999999999999999999999965311      


Q ss_pred             ------HHHHHHHHHhcCCCCcceEEEecCCCC-----CchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-CCC
Q 025203          177 ------RSYTVDNLIHVGYHGWASLELRGLEDE-----YKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKP  242 (256)
Q Consensus       177 ------r~~T~~~L~~~G~~~~~~lilr~~~~~-----~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g  242 (256)
                            -+...+.|+..|.. .+.++..+....     +||.+   ..+...+++.+.  ....+|||..+|+++| .+|
T Consensus        67 ~~f~~~~~~m~~~l~~~gv~-id~i~~Cph~p~~~c~cRKP~~---gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~g  142 (181)
T COG0241          67 ADFDKLHNKMLKILASQGVK-IDGILYCPHHPEDNCDCRKPKP---GMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAG  142 (181)
T ss_pred             HHHHHHHHHHHHHHHHcCCc-cceEEECCCCCCCCCcccCCCh---HHHHHHHHHhCCCccceEEecCcHHHHHHHHHCC
Confidence                  11234566677874 567777665422     34433   123334444333  4588999999999987 467


Q ss_pred             CcEEEec
Q 025203          243 KRTFKLP  249 (256)
Q Consensus       243 ~r~fklP  249 (256)
                      .+.+.+=
T Consensus       143 i~~~~~~  149 (181)
T COG0241         143 IKGVLVL  149 (181)
T ss_pred             CCceEEE
Confidence            7766553

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.76  E-value=3.6e-08  Score=87.34  Aligned_cols=64  Identities=13%  Similarity=0.253  Sum_probs=54.6

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      ++++||+||||++...                       ....++|++.+++++|+++|++++|+|||+...++...+.|
T Consensus         2 k~i~~D~DGtl~~~~~-----------------------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l   58 (257)
T TIGR01458         2 KGVLLDISGVLYISDA-----------------------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL   58 (257)
T ss_pred             CEEEEeCCCeEEeCCC-----------------------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence            5899999999998431                       00127899999999999999999999999998888889999


Q ss_pred             HhcCCCC
Q 025203          185 IHVGYHG  191 (256)
Q Consensus       185 ~~~G~~~  191 (256)
                      +.+|++.
T Consensus        59 ~~~g~~~   65 (257)
T TIGR01458        59 QRLGFDI   65 (257)
T ss_pred             HHcCCCC
Confidence            9999973

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.76  E-value=8.7e-08  Score=82.71  Aligned_cols=98  Identities=16%  Similarity=0.025  Sum_probs=64.4

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE-ecCC-CCCc---h--hhhhhHH-HHHH
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL-RGLE-DEYK---K--VQQYKAQ-VRKR  217 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil-r~~~-~~~k---p--~~~~K~~-~r~~  217 (256)
                      .+..||+.++++.++++|++++++||.....   +....+.+|++.+....+ ..++ ..+.   +  ....|.. +++.
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~l---v~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~  152 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFL---VEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL  152 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHH---HHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence            7889999999999999999999999998754   556667789986532222 2211 1110   1  1133433 3344


Q ss_pred             HHhcCCc--EEEEEcCCccccCCC-CCCCcEE
Q 025203          218 LVKEGYR--IWGVVGDQWSSFEGL-PKPKRTF  246 (256)
Q Consensus       218 l~~~g~~--i~~~iGD~~sDl~ga-~~g~r~f  246 (256)
                      +.+.|.+  .+..+||+.+|+..- .+|.++.
T Consensus       153 ~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia  184 (212)
T COG0560         153 AAELGIPLEETVAYGDSANDLPMLEAAGLPIA  184 (212)
T ss_pred             HHHcCCCHHHeEEEcCchhhHHHHHhCCCCeE
Confidence            4555765  699999999999653 2344433

>PRK10444 UMP phosphatase; Provisional

Probab=98.75  E-value=4.9e-08  Score=86.15  Aligned_cols=67  Identities=16%  Similarity=0.233  Sum_probs=56.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.++||+||||++..                           .++|++.++++.|+++|.+++++|||+...+....+.|
T Consensus         2 ~~v~~DlDGtL~~~~---------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l   54 (248)
T PRK10444          2 KNVICDIDGVLMHDN---------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF   54 (248)
T ss_pred             cEEEEeCCCceEeCC---------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            589999999999832                           46899999999999999999999999998888899999


Q ss_pred             HhcCCCCcceEEEe
Q 025203          185 IHVGYHGWASLELR  198 (256)
Q Consensus       185 ~~~G~~~~~~lilr  198 (256)
                      +++|++.-.+.++.
T Consensus        55 ~~~G~~~~~~~i~t   68 (248)
T PRK10444         55 ATAGVDVPDSVFYT   68 (248)
T ss_pred             HHcCCCCCHhhEec
Confidence            99999643333333

>PRK08238 hypothetical protein; Validated

Probab=98.74  E-value=5.7e-08  Score=93.30  Aligned_cols=135  Identities=17%  Similarity=0.209  Sum_probs=81.4

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhcc--CCCCCC-----------HHHHHHHHH------hcCCcchHHHHHHHHHHHHc
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGF--GGERLN-----------ASSWEAWMK------ESKAPALEHTLNLFHEIKNR  162 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~--g~~~~~-----------~~~~~~wv~------~~~~~~~pg~~ell~~L~~~  162 (256)
                      ......+||+||||+.+.-.+....+  ...++.           .....+.+.      ....+..|++.+++++++++
T Consensus         8 ~~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~   87 (479)
T PRK08238          8 SRDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAA   87 (479)
T ss_pred             CCCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHC
Confidence            34568999999999998755443221  111111           011111111      13346779999999999999


Q ss_pred             CCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhH-HHHHHHHhcCCcEEEEEcCCccccCCCCC
Q 025203          163 GVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKA-QVRKRLVKEGYRIWGVVGDQWSSFEGLPK  241 (256)
Q Consensus       163 G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~-~~r~~l~~~g~~i~~~iGD~~sDl~ga~~  241 (256)
                      |++++++|++++..   +...+++.|+  ++.++..++....|+.+  |. .+.+.+   |-+-+.++||+.+|+.....
T Consensus        88 G~~v~LaTas~~~~---a~~i~~~lGl--Fd~Vigsd~~~~~kg~~--K~~~l~~~l---~~~~~~yvGDS~~Dlp~~~~  157 (479)
T PRK08238         88 GRKLVLATASDERL---AQAVAAHLGL--FDGVFASDGTTNLKGAA--KAAALVEAF---GERGFDYAGNSAADLPVWAA  157 (479)
T ss_pred             CCEEEEEeCCCHHH---HHHHHHHcCC--CCEEEeCCCccccCCch--HHHHHHHHh---CccCeeEecCCHHHHHHHHh
Confidence            99999999998754   5666777887  34444443333333332  22 222222   32335789999999987643


Q ss_pred             CCcEE
Q 025203          242 PKRTF  246 (256)
Q Consensus       242 g~r~f  246 (256)
                      ..+.+
T Consensus       158 A~~av  162 (479)
T PRK08238        158 ARRAI  162 (479)
T ss_pred             CCCeE
Confidence            23433

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.73  E-value=1.4e-07  Score=79.31  Aligned_cols=141  Identities=21%  Similarity=0.251  Sum_probs=87.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhc---------------cCC-CCCC-------------HHHHHHHHHhcCCcchHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHG---------------FGG-ERLN-------------ASSWEAWMKESKAPALEHTLN  154 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~---------------~g~-~~~~-------------~~~~~~wv~~~~~~~~pg~~e  154 (256)
                      .++|+||+|-|++.-.-.-.-+.               +|+ -+|.             .....+++...+...-||+.+
T Consensus        16 ~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k~~lT~Gi~e   95 (227)
T KOG1615|consen   16 ADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQKPTLTPGIRE   95 (227)
T ss_pred             cCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCCCccCCCHHH
Confidence            47999999999998542211111               222 2331             234556666778888999999


Q ss_pred             HHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC---c-ceEEEecCC-------CCCchhhhhhHHHHHHHHh-cC
Q 025203          155 LFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG---W-ASLELRGLE-------DEYKKVQQYKAQVRKRLVK-EG  222 (256)
Q Consensus       155 ll~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~---~-~~lilr~~~-------~~~kp~~~~K~~~r~~l~~-~g  222 (256)
                      |.+.|+++|.+++++||.-...   ....=..+|++-   | ..+.+..++       .....+..-|++..+.+++ ..
T Consensus        96 Lv~~L~~~~~~v~liSGGF~~~---i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~~  172 (227)
T KOG1615|consen   96 LVSRLHARGTQVYLISGGFRQL---IEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNYN  172 (227)
T ss_pred             HHHHHHHcCCeEEEEcCChHHH---HHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCCC
Confidence            9999999999999999986443   222223467763   2 222222221       1111233456666666654 23


Q ss_pred             CcEEEEEcCCccccCCCCCCCcEEE
Q 025203          223 YRIWGVVGDQWSSFEGLPKPKRTFK  247 (256)
Q Consensus       223 ~~i~~~iGD~~sDl~ga~~g~r~fk  247 (256)
                      +..+.+|||.-+|+.+-+.|.-++-
T Consensus       173 ~~~~~mvGDGatDlea~~pa~afi~  197 (227)
T KOG1615|consen  173 YKTIVMVGDGATDLEAMPPADAFIG  197 (227)
T ss_pred             hheeEEecCCccccccCCchhhhhc
Confidence            4568999999999998764444433

>PRK11590 hypothetical protein; Provisional

Probab=98.70  E-value=1.2e-07  Score=81.42  Aligned_cols=103  Identities=10%  Similarity=0.051  Sum_probs=60.2

Q ss_pred             CcchHHHHHHH-HHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC--CCCc--hhhhhhHHHHHHHHh
Q 025203          146 APALEHTLNLF-HEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE--DEYK--KVQQYKAQVRKRLVK  220 (256)
Q Consensus       146 ~~~~pg~~ell-~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~--~~~k--p~~~~K~~~r~~l~~  220 (256)
                      ..++||+.+++ +.++++|++++++||+++..   +...+..+|+..-++++...-.  ..++  ...-+..+....+++
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~---~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~  170 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPL---VEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLER  170 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHH---HHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHH
Confidence            56799999999 67888999999999998754   5667777775222233322211  0111  011121222222222


Q ss_pred             ---cCCcEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          221 ---EGYRIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       221 ---~g~~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                         .....+...||+.+|+.--. ++..+..=|+|
T Consensus       171 ~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~  205 (211)
T PRK11590        171 KIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPRG  205 (211)
T ss_pred             HhCCCcceEEEecCCcccHHHHHhCCCCEEECccH
Confidence               24556778999999997643 34333333554

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.70  E-value=9e-08  Score=85.62  Aligned_cols=62  Identities=18%  Similarity=0.348  Sum_probs=54.2

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+|||||||++.                           ..++||+.+++++|+++|++++++|||+...+....+.
T Consensus         2 ~~~~~~D~DGtl~~~---------------------------~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~   54 (279)
T TIGR01452         2 AQGFIFDCDGVLWLG---------------------------ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALK   54 (279)
T ss_pred             ccEEEEeCCCceEcC---------------------------CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence            468999999999883                           24679999999999999999999999998777778889


Q ss_pred             HHhcCCCCc
Q 025203          184 LIHVGYHGW  192 (256)
Q Consensus       184 L~~~G~~~~  192 (256)
                      |+++|++.-
T Consensus        55 l~~~G~~~~   63 (279)
T TIGR01452        55 FARLGFNGL   63 (279)
T ss_pred             HHHcCCCCC
Confidence            999999743

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=98.66  E-value=2.9e-07  Score=76.58  Aligned_cols=119  Identities=21%  Similarity=0.168  Sum_probs=78.0

Q ss_pred             cCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCe--EEEEeCCCccc
Q 025203           99 LAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVK--IFLVSSRRESL  176 (256)
Q Consensus        99 ~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~--i~ivTnR~~~~  176 (256)
                      ++..|.+++|||.|+||..-.                         ...+-|...+.++++++.+..  |.|+||.....
T Consensus        36 Lk~~Gik~li~DkDNTL~~~~-------------------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~   90 (168)
T PF09419_consen   36 LKKKGIKALIFDKDNTLTPPY-------------------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSS   90 (168)
T ss_pred             hhhcCceEEEEcCCCCCCCCC-------------------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence            455789999999999998722                         244558888999999999875  99999985221


Q ss_pred             H---HHHHHHH-HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhc----CCcEEEEEcCCc-cccCCCC-CCCcEE
Q 025203          177 R---SYTVDNL-IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKE----GYRIWGVVGDQW-SSFEGLP-KPKRTF  246 (256)
Q Consensus       177 r---~~T~~~L-~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~----g~~i~~~iGD~~-sDl~ga~-~g~r~f  246 (256)
                      .   ..-.+.+ +.+|++.     ++-.  ..||..  ..++.+.+...    ..+.+++||||. +|+.+|+ .|..++
T Consensus        91 ~d~~~~~a~~~~~~lgIpv-----l~h~--~kKP~~--~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~ti  161 (168)
T PF09419_consen   91 DDPDGERAEALEKALGIPV-----LRHR--AKKPGC--FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTI  161 (168)
T ss_pred             cCccHHHHHHHHHhhCCcE-----EEeC--CCCCcc--HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEE
Confidence            1   1113333 5578772     2221  234411  12344444332    356799999997 9999986 677887


Q ss_pred             EecCC
Q 025203          247 KLPNS  251 (256)
Q Consensus       247 klPnp  251 (256)
                      .+-++
T Consensus       162 lv~~g  166 (168)
T PF09419_consen  162 LVTDG  166 (168)
T ss_pred             EEecC
Confidence            76554

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=98.64  E-value=1.4e-07  Score=84.11  Aligned_cols=99  Identities=17%  Similarity=0.298  Sum_probs=71.2

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      +..++++||+||||...                           ..++||+.+++++|+++|.+++|+||++...+....
T Consensus         6 ~~y~~~l~DlDGvl~~G---------------------------~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~   58 (269)
T COG0647           6 DKYDGFLFDLDGVLYRG---------------------------NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVA   58 (269)
T ss_pred             hhcCEEEEcCcCceEeC---------------------------CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Confidence            45789999999999972                           568899999999999999999999999999988888


Q ss_pred             HHHHh-cCCCCc-ceEEEecCCC-----CCch-hhhh---hHHHHHHHHhcCCcEEE
Q 025203          182 DNLIH-VGYHGW-ASLELRGLED-----EYKK-VQQY---KAQVRKRLVKEGYRIWG  227 (256)
Q Consensus       182 ~~L~~-~G~~~~-~~lilr~~~~-----~~kp-~~~~---K~~~r~~l~~~g~~i~~  227 (256)
                      +.|.. .|.+.. ++++.++...     +.++ ...|   -.+++.+++..|+.++.
T Consensus        59 ~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~  115 (269)
T COG0647          59 ARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVD  115 (269)
T ss_pred             HHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEec
Confidence            88988 555443 4444333210     1111 1112   14567788877876543

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.64  E-value=1.1e-07  Score=85.22  Aligned_cols=73  Identities=21%  Similarity=0.287  Sum_probs=58.3

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcc-hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPA-LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~-~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T  180 (256)
                      .-++.++||+||||++...                        .... -|++.++|++|+++|++++++||++...   .
T Consensus       126 ~~~~~i~~D~D~TL~~~~~------------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~---v  178 (303)
T PHA03398        126 EIPHVIVFDLDSTLITDEE------------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREH---V  178 (303)
T ss_pred             eeccEEEEecCCCccCCCC------------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHH---H
Confidence            3478999999999999641                        2323 3999999999999999999999986543   6


Q ss_pred             HHHHHhcCCCCcceEEEecCC
Q 025203          181 VDNLIHVGYHGWASLELRGLE  201 (256)
Q Consensus       181 ~~~L~~~G~~~~~~lilr~~~  201 (256)
                      ...|+++|+..++..++.++.
T Consensus       179 ~~~Le~lgL~~yFDvII~~g~  199 (303)
T PHA03398        179 VHSLKETKLEGYFDIIICGGR  199 (303)
T ss_pred             HHHHHHcCCCccccEEEECCC
Confidence            788999999988776666544

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.60  E-value=2.1e-07  Score=81.31  Aligned_cols=103  Identities=16%  Similarity=0.108  Sum_probs=77.3

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc-ceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW-ASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~-~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      -...++++++++.|+++|..+.++||-+...    ...|...|+..+ +.++.+......||++..+....+.+. ....
T Consensus       112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~----~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~-v~Pe  186 (237)
T KOG3085|consen  112 WKYLDGMQELLQKLRKKGTILGIISNFDDRL----RLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLG-VKPE  186 (237)
T ss_pred             ceeccHHHHHHHHHHhCCeEEEEecCCcHHH----HHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhC-CChH
Confidence            4567899999999999999999999988765    356667787665 455666666677899855433333221 1245


Q ss_pred             EEEEEcCCc-cccCCC-CCCCcEEEecCCCC
Q 025203          225 IWGVVGDQW-SSFEGL-PKPKRTFKLPNSMY  253 (256)
Q Consensus       225 i~~~iGD~~-sDl~ga-~~g~r~fklPnp~Y  253 (256)
                      .|+.|||.. +|++|| ..|.+++.+-|.+.
T Consensus       187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~~~  217 (237)
T KOG3085|consen  187 ECVHIGDLLENDYEGARNLGWHAILVDNSIT  217 (237)
T ss_pred             HeEEecCccccccHhHHHcCCEEEEEccccc
Confidence            699999997 899998 58999999888765

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=98.59  E-value=2.6e-07  Score=81.47  Aligned_cols=61  Identities=13%  Similarity=0.277  Sum_probs=52.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.++||+||||++..                           .++|++.+++++|+++|++++|+||++.+.+....+.|
T Consensus         2 ~~~~~D~DGtl~~~~---------------------------~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l   54 (249)
T TIGR01457         2 KGYLIDLDGTMYKGK---------------------------ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML   54 (249)
T ss_pred             CEEEEeCCCceEcCC---------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            589999999999842                           35789999999999999999999997766677788999


Q ss_pred             HhcCCCCc
Q 025203          185 IHVGYHGW  192 (256)
Q Consensus       185 ~~~G~~~~  192 (256)
                      +++|++.-
T Consensus        55 ~~~g~~~~   62 (249)
T TIGR01457        55 ASFDIPAT   62 (249)
T ss_pred             HHcCCCCC
Confidence            99999854

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=98.57  E-value=1.9e-07  Score=78.94  Aligned_cols=126  Identities=18%  Similarity=0.332  Sum_probs=76.4

Q ss_pred             EEEecCCCccCChHHHHHh---ccCCCC-CCH------HHHHHH--------------HHh----cCCcchHHHHHHHHH
Q 025203          107 WIFDVDDTLLSTIPYFKKH---GFGGER-LNA------SSWEAW--------------MKE----SKAPALEHTLNLFHE  158 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~---~~g~~~-~~~------~~~~~w--------------v~~----~~~~~~pg~~ell~~  158 (256)
                      |.+||||||.|....+...   .|+..+ .+.      ..+..|              ...    ...+|+||+.+.+++
T Consensus         5 I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~~~f~~l~p~~gA~e~l~~   84 (191)
T PF06941_consen    5 IAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDITGYWDWEKWGITEPEFYEKLWRFYEEPGFFSNLPPIPGAVEALKK   84 (191)
T ss_dssp             EEEESBTTTB-HHHHHHHHHHHHTTTS----GGGGTSSSHHHHHHHHSTTHHHHHHHHHTSTTTTTT--B-TTHHHHHHH
T ss_pred             EEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHhhhhhHHHHhCCCCHHHHHHHHHHHhChhhhcCCCccHHHHHHHHH
Confidence            8999999999987654432   344320 110      011222              111    357999999999999


Q ss_pred             HHHcCCeEEEEeCCCcc----cHHHHHHHHHhc-CCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCc
Q 025203          159 IKNRGVKIFLVSSRRES----LRSYTVDNLIHV-GYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQW  233 (256)
Q Consensus       159 L~~~G~~i~ivTnR~~~----~r~~T~~~L~~~-G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~  233 (256)
                      |.++|+.+++||+|+..    ....|.+||++. |...++.+++..+.    .           +  .+.+  ++|.|++
T Consensus        85 L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~K----~-----------~--v~~D--vlIDD~~  145 (191)
T PF06941_consen   85 LRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGDK----T-----------L--VGGD--VLIDDRP  145 (191)
T ss_dssp             HHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESSG----G-----------G--C--S--EEEESSS
T ss_pred             HHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecCC----C-----------e--Eecc--EEecCCh
Confidence            99999999999999865    467899999886 33225677776431    0           0  1223  5799998


Q ss_pred             cccCCC-CCCCcEEEecCC
Q 025203          234 SSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       234 sDl~ga-~~g~r~fklPnp  251 (256)
                      .-+... ..|..++.+..|
T Consensus       146 ~n~~~~~~~g~~~iLfd~p  164 (191)
T PF06941_consen  146 HNLEQFANAGIPVILFDQP  164 (191)
T ss_dssp             HHHSS-SSESSEEEEE--G
T ss_pred             HHHHhccCCCceEEEEcCC
Confidence            655543 467788877655

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.49  E-value=1.6e-06  Score=75.86  Aligned_cols=131  Identities=20%  Similarity=0.265  Sum_probs=83.5

Q ss_pred             EEEEecCCCccCCh-HHHHHhccCCCCC--------CHHHHHHHHHh-------------------cCCcchHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTI-PYFKKHGFGGERL--------NASSWEAWMKE-------------------SKAPALEHTLNLFH  157 (256)
Q Consensus       106 avvfDiDgTlldn~-~~~~~~~~g~~~~--------~~~~~~~wv~~-------------------~~~~~~pg~~ell~  157 (256)
                      .+|||.|+|+++.. ..+.-..++.+..        ....|.+++..                   ...|.-||+.++++
T Consensus         2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~   81 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR   81 (234)
T ss_pred             EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence            48999999999854 3333333443322        11235555432                   46788999999999


Q ss_pred             HH--HHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEe--------------cCCCCCc---hhhhhhHHHHHHH
Q 025203          158 EI--KNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELR--------------GLEDEYK---KVQQYKAQVRKRL  218 (256)
Q Consensus       158 ~L--~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr--------------~~~~~~k---p~~~~K~~~r~~l  218 (256)
                      .+  ++.|+.++|+|....-.   ...+|++.|+...+.-|..              +...+.+   |.-.-|..+.+.+
T Consensus        82 ~l~~~~~~~~~~IiSDaNs~f---I~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmCK~~il~~~  158 (234)
T PF06888_consen   82 FLAKNQRGFDLIIISDANSFF---IETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMCKGKILERL  158 (234)
T ss_pred             HHHhcCCCceEEEEeCCcHhH---HHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccchHHHHHHH
Confidence            99  45899999999987655   6888999999764322222              2211111   2112344444444


Q ss_pred             Hhc----C--CcEEEEEcCCccccCCC
Q 025203          219 VKE----G--YRIWGVVGDQWSSFEGL  239 (256)
Q Consensus       219 ~~~----g--~~i~~~iGD~~sDl~ga  239 (256)
                      .+.    |  |+-++||||.-+|+=.+
T Consensus       159 ~~~~~~~g~~~~rviYiGDG~nD~Cp~  185 (234)
T PF06888_consen  159 LQEQAQRGVPYDRVIYIGDGRNDFCPA  185 (234)
T ss_pred             HHHHhhcCCCcceEEEECCCCCCcCcc
Confidence            332    4  77899999999999654

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.48  E-value=3.3e-07  Score=79.56  Aligned_cols=106  Identities=13%  Similarity=0.012  Sum_probs=69.5

Q ss_pred             HHHHHHhc--CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhc---CCCCcceEEEecCCCCCchhhhhh
Q 025203          137 WEAWMKES--KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHV---GYHGWASLELRGLEDEYKKVQQYK  211 (256)
Q Consensus       137 ~~~wv~~~--~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~---G~~~~~~lilr~~~~~~kp~~~~K  211 (256)
                      |.+.+..+  +.+++||+.++|++|+++|++++++||.+...   ....+++.   ++..++..++.. ....||++...
T Consensus        83 w~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~---~~~~~~~~~~~~L~~~f~~~fd~-~~g~KP~p~~y  158 (220)
T TIGR01691        83 WRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPA---QKLLFGHSDAGNLTPYFSGYFDT-TVGLKTEAQSY  158 (220)
T ss_pred             HHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHhhccccchhhhcceEEEe-CcccCCCHHHH
Confidence            44444332  45799999999999999999999999987543   23334443   343333323322 12346666433


Q ss_pred             HHHHHHHHhcCC--cEEEEEcCCccccCCC-CCCCcEEEec
Q 025203          212 AQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       212 ~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      .   +.+++.|.  +.+++|||+..|+.+| .+|.+++.+-
T Consensus       159 ~---~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~  196 (220)
T TIGR01691       159 V---KIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLV  196 (220)
T ss_pred             H---HHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEE
Confidence            2   33344454  4599999999999998 4899988773

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.43  E-value=2.1e-07  Score=75.79  Aligned_cols=108  Identities=17%  Similarity=0.223  Sum_probs=71.9

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..+-+|||+||||.|-.-||..++-.-+.|+.              ..|.  -++.|.+.|++++++|||....   .++
T Consensus         7 ~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv--------------~DG~--Gik~l~~~Gi~vAIITGr~s~i---ve~   67 (170)
T COG1778           7 NIKLLILDVDGVLTDGKLYYDENGEEIKAFNV--------------RDGH--GIKLLLKSGIKVAIITGRDSPI---VEK   67 (170)
T ss_pred             hceEEEEeccceeecCeEEEcCCCceeeeeec--------------cCcH--HHHHHHHcCCeEEEEeCCCCHH---HHH
Confidence            45789999999999999888766533334431              1121  2566889999999999998754   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      ..+.+|+..   ++....+ +  - ..+ .++++++ ..+++.+.||||.++|+..
T Consensus        68 Ra~~LGI~~---~~qG~~d-K--~-~a~-~~L~~~~-~l~~e~~ayiGDD~~Dlpv  114 (170)
T COG1778          68 RAKDLGIKH---LYQGISD-K--L-AAF-EELLKKL-NLDPEEVAYVGDDLVDLPV  114 (170)
T ss_pred             HHHHcCCce---eeechHh-H--H-HHH-HHHHHHh-CCCHHHhhhhcCccccHHH
Confidence            888899963   3433321 1  0 111 2333333 2356779999999999864

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=98.42  E-value=6e-07  Score=79.17  Aligned_cols=59  Identities=19%  Similarity=0.268  Sum_probs=47.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.+++||||||+++.                          ...-|.+.+.+++++++|++++++|||+...   ....
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~   53 (272)
T PRK10530          3 YRVIALDLDGTLLTPK--------------------------KTILPESLEALARAREAGYKVIIVTGRHHVA---IHPF   53 (272)
T ss_pred             ccEEEEeCCCceECCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHH
Confidence            5789999999999854                          2344778999999999999999999998654   4566


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|+..
T Consensus        54 ~~~l~~~~   61 (272)
T PRK10530         54 YQALALDT   61 (272)
T ss_pred             HHhcCCCC
Confidence            67777764

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.41  E-value=6.5e-07  Score=77.07  Aligned_cols=59  Identities=14%  Similarity=0.190  Sum_probs=45.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.+++||||||++..                          ...-|.+.+.+++|+++|++++++|||+...   ....
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~   53 (230)
T PRK01158          3 IKAIAIDIDGTITDKD--------------------------RRLSLKAVEAIRKAEKLGIPVILATGNVLCF---ARAA   53 (230)
T ss_pred             eeEEEEecCCCcCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCchHH---HHHH
Confidence            4789999999999853                          1233788999999999999999999999654   3344


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|++.
T Consensus        54 ~~~l~~~~   61 (230)
T PRK01158         54 AKLIGTSG   61 (230)
T ss_pred             HHHhCCCC
Confidence            55666654

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=98.41  E-value=1e-06  Score=77.89  Aligned_cols=58  Identities=17%  Similarity=0.147  Sum_probs=46.6

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.+++||||||+++.                          ...-|.+.+.+++|+++|++++++|||+...   +...
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~   53 (270)
T PRK10513          3 IKLIAIDMDGTLLLPD--------------------------HTISPAVKQAIAAARAKGVNVVLTTGRPYAG---VHRY   53 (270)
T ss_pred             eEEEEEecCCcCcCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEecCCChHH---HHHH
Confidence            5789999999999853                          1233778999999999999999999998654   4556


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++.+|+.
T Consensus        54 ~~~l~~~   60 (270)
T PRK10513         54 LKELHME   60 (270)
T ss_pred             HHHhCCC
Confidence            6677764

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=98.41  E-value=3.2e-07  Score=75.71  Aligned_cols=109  Identities=17%  Similarity=0.166  Sum_probs=62.5

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCC--CHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERL--NASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL------  176 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~--~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~------  176 (256)
                      +...||+||||+.+...        ..|  +++.|        .-..|++.+.|++|.+.|++|+++||-..-.      
T Consensus         1 Kia~fD~DgTLi~~~s~--------~~f~~~~~D~--------~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~   64 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSG--------KKFPKDPDDW--------KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEK   64 (159)
T ss_dssp             SEEEE-SCTTTEE-STS--------TTS-SSTCGG--------EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCC
T ss_pred             CEEEEeCCCCccCCCCC--------CcCcCCHHHh--------hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccc
Confidence            46789999999987531        222  12222        1223579999999999999999999975322      


Q ss_pred             -----HHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhc-------CCcEEEEEcCCccc
Q 025203          177 -----RSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKE-------GYRIWGVVGDQWSS  235 (256)
Q Consensus       177 -----r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~-------g~~i~~~iGD~~sD  235 (256)
                           .......++.+|++.  .++.... +.-+||.+    ++...+.+.       ...-..+|||...+
T Consensus        65 ~~~~~~~ki~~il~~l~ip~--~~~~a~~~d~~RKP~~----GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   65 DLENFHEKIENILKELGIPI--QVYAAPHKDPCRKPNP----GMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             HHHHHHHHHHHHHHHCTS-E--EEEECGCSSTTSTTSS----HHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             hHHHHHHHHHHHHHHcCCce--EEEecCCCCCCCCCch----hHHHHHHHhccccccccccceEEEeccCCC
Confidence                 233445667788882  3333333 34566654    333433321       12348999998544

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.40  E-value=1.2e-06  Score=72.94  Aligned_cols=84  Identities=19%  Similarity=0.184  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCC-C-----Cchhh-h--hhHHHHHHH--
Q 025203          150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED-E-----YKKVQ-Q--YKAQVRKRL--  218 (256)
Q Consensus       150 pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~-~-----~kp~~-~--~K~~~r~~l--  218 (256)
                      |++.++++.++++|++++++|+.+...   +...++..|++... ++...... .     .+-.+ .  -|....+.+  
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~---i~~~~~~~~i~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~  167 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEI---IEPIAERLGIDDDN-VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYI  167 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHH---HHHHHHHTTSSEGG-EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHH---HHHHHHHcCCCceE-EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHH
Confidence            444499999999999999999997543   56666788998532 11111100 0     00000 0  144444444  


Q ss_pred             -H--hcCCcEEEEEcCCccccC
Q 025203          219 -V--KEGYRIWGVVGDQWSSFE  237 (256)
Q Consensus       219 -~--~~g~~i~~~iGD~~sDl~  237 (256)
                       .  ..+...++++||+.+|+.
T Consensus       168 ~~~~~~~~~~~~~iGDs~~D~~  189 (192)
T PF12710_consen  168 RDEEDIDPDRVIAIGDSINDLP  189 (192)
T ss_dssp             HHHHTHTCCEEEEEESSGGGHH
T ss_pred             HhhcCCCCCeEEEEECCHHHHH
Confidence             1  246778999999999985

>PRK10976 putative hydrolase; Provisional

Probab=98.40  E-value=7.1e-07  Score=78.77  Aligned_cols=60  Identities=15%  Similarity=0.130  Sum_probs=47.4

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.+++||||||+++.                          ...-|.+.+.+++++++|++++++|||+...   ....
T Consensus         2 ikli~~DlDGTLl~~~--------------------------~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~   52 (266)
T PRK10976          2 YQVVASDLDGTLLSPD--------------------------HTLSPYAKETLKLLTARGIHFVFATGRHHVD---VGQI   52 (266)
T ss_pred             ceEEEEeCCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHH
Confidence            3689999999999853                          1234778999999999999999999998654   4556


Q ss_pred             HHhcCCCCc
Q 025203          184 LIHVGYHGW  192 (256)
Q Consensus       184 L~~~G~~~~  192 (256)
                      ++.+|++.+
T Consensus        53 ~~~l~~~~~   61 (266)
T PRK10976         53 RDNLEIKSY   61 (266)
T ss_pred             HHhcCCCCe
Confidence            677777643

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=98.40  E-value=7.2e-07  Score=79.12  Aligned_cols=60  Identities=20%  Similarity=0.227  Sum_probs=48.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.+++||||||+++.                          ...-|.+++.+++|+++|++++++|||+...   ..+.
T Consensus         2 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~---~~~~   52 (272)
T PRK15126          2 ARLAAFDMDGTLLMPD--------------------------HHLGEKTLSTLARLRERDITLTFATGRHVLE---MQHI   52 (272)
T ss_pred             ccEEEEeCCCcCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHH
Confidence            4689999999999853                          2344788999999999999999999998654   5566


Q ss_pred             HHhcCCCCc
Q 025203          184 LIHVGYHGW  192 (256)
Q Consensus       184 L~~~G~~~~  192 (256)
                      ++.+|+..+
T Consensus        53 ~~~l~~~~~   61 (272)
T PRK15126         53 LGALSLDAY   61 (272)
T ss_pred             HHHcCCCCc
Confidence            777887643

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.37  E-value=1e-06  Score=75.40  Aligned_cols=57  Identities=16%  Similarity=0.250  Sum_probs=44.4

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.|++||||||+++.                          ...-|.+.+.+++|+++|++++++|||+...   ..+.+
T Consensus         2 k~v~~DlDGTLl~~~--------------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~---~~~~~   52 (215)
T TIGR01487         2 KLVAIDIDGTLTEPN--------------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVPF---ARALA   52 (215)
T ss_pred             cEEEEecCCCcCCCC--------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcchh---HHHHH
Confidence            589999999999843                          2244788999999999999999999998654   33344


Q ss_pred             HhcCCC
Q 025203          185 IHVGYH  190 (256)
Q Consensus       185 ~~~G~~  190 (256)
                      +.+++.
T Consensus        53 ~~l~~~   58 (215)
T TIGR01487        53 VLIGTS   58 (215)
T ss_pred             HHhCCC
Confidence            555554

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.37  E-value=8.9e-07  Score=78.80  Aligned_cols=60  Identities=18%  Similarity=0.176  Sum_probs=48.4

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.+++||||||+++.                          ....|++.+.+++|+++|++++++|||+...   ....
T Consensus         4 ~kli~~DlDGTLl~~~--------------------------~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~---~~~~   54 (273)
T PRK00192          4 KLLVFTDLDGTLLDHH--------------------------TYSYEPAKPALKALKEKGIPVIPCTSKTAAE---VEVL   54 (273)
T ss_pred             ceEEEEcCcccCcCCC--------------------------CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            5789999999999843                          2344789999999999999999999998644   5666


Q ss_pred             HHhcCCCCc
Q 025203          184 LIHVGYHGW  192 (256)
Q Consensus       184 L~~~G~~~~  192 (256)
                      ++++|+..+
T Consensus        55 ~~~l~l~~~   63 (273)
T PRK00192         55 RKELGLEDP   63 (273)
T ss_pred             HHHcCCCCC
Confidence            777887643

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.31  E-value=5.3e-06  Score=71.42  Aligned_cols=102  Identities=10%  Similarity=0.078  Sum_probs=58.8

Q ss_pred             CcchHHHHHHHH-HHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC--CCCc----hhh-hhhHH-HHH
Q 025203          146 APALEHTLNLFH-EIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE--DEYK----KVQ-QYKAQ-VRK  216 (256)
Q Consensus       146 ~~~~pg~~ell~-~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~--~~~k----p~~-~~K~~-~r~  216 (256)
                      ..++|++.++++ +++++|++++++||+++..   +....+..|+-+-++++...-.  +.++    +.. +-|.. +.+
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~---~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~  169 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPL---VEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ  169 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHH---HHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence            367999999996 7888999999999998754   4444445444222333322210  1011    110 12221 222


Q ss_pred             HHHhcCCcEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          217 RLVKEGYRIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       217 ~l~~~g~~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .+ ...+..+...||+.+|+.-- .++..+..=|+|
T Consensus       170 ~~-~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~  204 (210)
T TIGR01545       170 KI-GSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKRG  204 (210)
T ss_pred             Hh-CCChhheEEecCCcccHHHHHhCCCcEEECcch
Confidence            22 22556778999999999763 344444443544

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=98.31  E-value=1.5e-06  Score=76.63  Aligned_cols=59  Identities=25%  Similarity=0.383  Sum_probs=48.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.++|||||||++..                          ...-|.+.+.+++++++|++++++|||+-..   ....
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~---~~~~   53 (264)
T COG0561           3 IKLLAFDLDGTLLDSN--------------------------KTISPETKEALARLREKGVKVVLATGRPLPD---VLSI   53 (264)
T ss_pred             eeEEEEcCCCCccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCChHH---HHHH
Confidence            5799999999999965                          2355889999999999999999999998644   5666


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|...
T Consensus        54 ~~~l~~~~   61 (264)
T COG0561          54 LEELGLDG   61 (264)
T ss_pred             HHHcCCCc
Confidence            67777764

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.28  E-value=1.9e-06  Score=76.67  Aligned_cols=59  Identities=17%  Similarity=0.195  Sum_probs=46.8

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      .++.|++||||||+++.                          ....+.+.+.+++|+++|++++++|||+...   ...
T Consensus         6 ~~~lI~~DlDGTLL~~~--------------------------~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~---i~~   56 (271)
T PRK03669          6 DPLLIFTDLDGTLLDSH--------------------------TYDWQPAAPWLTRLREAQVPVILCSSKTAAE---MLP   56 (271)
T ss_pred             CCeEEEEeCccCCcCCC--------------------------CcCcHHHHHHHHHHHHcCCeEEEEcCCCHHH---HHH
Confidence            46899999999999843                          1233678899999999999999999999654   455


Q ss_pred             HHHhcCCC
Q 025203          183 NLIHVGYH  190 (256)
Q Consensus       183 ~L~~~G~~  190 (256)
                      .++.+|++
T Consensus        57 ~~~~l~~~   64 (271)
T PRK03669         57 LQQTLGLQ   64 (271)
T ss_pred             HHHHhCCC
Confidence            66677774

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=98.28  E-value=1.5e-06  Score=74.43  Aligned_cols=55  Identities=18%  Similarity=0.205  Sum_probs=41.6

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH  186 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~  186 (256)
                      |+|||||||+++.                          ...-|.+.+.+++|+++|++++++|||+....   .+.++.
T Consensus         1 i~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~---~~~~~~   51 (225)
T TIGR01482         1 IASDIDGTLTDPN--------------------------RAINESALEAIRKAESVGIPVVLVTGNSVQFA---RALAKL   51 (225)
T ss_pred             CeEeccCccCCCC--------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH
Confidence            5899999999854                          12337778899999999999999999987552   334455


Q ss_pred             cCCC
Q 025203          187 VGYH  190 (256)
Q Consensus       187 ~G~~  190 (256)
                      +|++
T Consensus        52 l~~~   55 (225)
T TIGR01482        52 IGTP   55 (225)
T ss_pred             hCCC
Confidence            5544

catalyze the same reaction as SPP.

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=98.27  E-value=1.8e-06  Score=74.07  Aligned_cols=55  Identities=16%  Similarity=0.225  Sum_probs=43.4

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH  186 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~  186 (256)
                      |++|||||||++.                          ....+.+.+.++.|+++|++++++|||+...   +...++.
T Consensus         2 i~~DlDGTLL~~~--------------------------~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~---~~~~~~~   52 (221)
T TIGR02463         2 VFSDLDGTLLDSH--------------------------SYDWQPAAPWLTRLQEAGIPVILCTSKTAAE---VEYLQKA   52 (221)
T ss_pred             EEEeCCCCCcCCC--------------------------CCCcHHHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHH
Confidence            7899999999853                          1234558899999999999999999999754   4556666


Q ss_pred             cCCC
Q 025203          187 VGYH  190 (256)
Q Consensus       187 ~G~~  190 (256)
                      +|++
T Consensus        53 l~~~   56 (221)
T TIGR02463        53 LGLT   56 (221)
T ss_pred             cCCC
Confidence            7765

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.24  E-value=1.7e-06  Score=71.46  Aligned_cols=124  Identities=14%  Similarity=0.083  Sum_probs=72.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHH-HHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNAS-SWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~-~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ++.+|+|+||||+.+..--...   ...|.-. ..+.=...-....-||+.+||+.|.+. +.|++.|+.++..   +..
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~y---A~~   73 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKV---DADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEY---ADP   73 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCC---CCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHH---HHH
Confidence            4689999999999875221100   0000000 000000001145679999999999988 9999999998665   455


Q ss_pred             HHHhcCCCC-c-ceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC
Q 025203          183 NLIHVGYHG-W-ASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       183 ~L~~~G~~~-~-~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~  240 (256)
                      .|..++... + ...+.|......++.  +    .+.|...|.  +-+++|||+..|+.++.
T Consensus        74 il~~ldp~~~~f~~~l~r~~~~~~~~~--~----~K~L~~l~~~~~~vIiVDD~~~~~~~~~  129 (162)
T TIGR02251        74 VLDILDRGGKVISRRLYRESCVFTNGK--Y----VKDLSLVGKDLSKVIIIDNSPYSYSLQP  129 (162)
T ss_pred             HHHHHCcCCCEEeEEEEccccEEeCCC--E----EeEchhcCCChhhEEEEeCChhhhccCc
Confidence            666666543 3 345555543222222  2    233444453  35899999999998764

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=98.24  E-value=2.5e-06  Score=74.87  Aligned_cols=57  Identities=21%  Similarity=0.314  Sum_probs=45.2

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      .++|||||||++..                          ...-+.+.+.+++|+++|++++++|||+...   ....++
T Consensus         1 li~~DlDGTLl~~~--------------------------~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~   51 (256)
T TIGR00099         1 LIFIDLDGTLLNDD--------------------------HTISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILK   51 (256)
T ss_pred             CEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHH
Confidence            37899999999853                          1233788999999999999999999998543   456667


Q ss_pred             hcCCCC
Q 025203          186 HVGYHG  191 (256)
Q Consensus       186 ~~G~~~  191 (256)
                      ++|+..
T Consensus        52 ~~~~~~   57 (256)
T TIGR00099        52 ELGLDT   57 (256)
T ss_pred             HcCCCC
Confidence            777763

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=98.23  E-value=2.5e-06  Score=74.09  Aligned_cols=56  Identities=23%  Similarity=0.207  Sum_probs=44.8

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      .|+|||||||++..                           ...|++.+.+++|+++|++++++|||+...   ....++
T Consensus         1 li~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~---~~~~~~   50 (225)
T TIGR02461         1 VIFTDLDGTLLPPG---------------------------YEPGPAREALEELKDLGFPIVFVSSKTRAE---QEYYRE   50 (225)
T ss_pred             CEEEeCCCCCcCCC---------------------------CCchHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHH
Confidence            37899999999832                           134679999999999999999999998654   456677


Q ss_pred             hcCCCC
Q 025203          186 HVGYHG  191 (256)
Q Consensus       186 ~~G~~~  191 (256)
                      ++|+..
T Consensus        51 ~lg~~~   56 (225)
T TIGR02461        51 ELGVEP   56 (225)
T ss_pred             HcCCCC
Confidence            788753

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=98.23  E-value=2.4e-06  Score=73.19  Aligned_cols=56  Identities=23%  Similarity=0.360  Sum_probs=45.4

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH  186 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~  186 (256)
                      |++||||||++..                          ...-|.+++.++.|+++|++++++|||+...   ....+..
T Consensus         1 i~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~---~~~~~~~   51 (254)
T PF08282_consen    1 IFSDLDGTLLNSD--------------------------GKISPETIEALKELQEKGIKLVIATGRSYSS---IKRLLKE   51 (254)
T ss_dssp             EEEECCTTTCSTT--------------------------SSSCHHHHHHHHHHHHTTCEEEEECSSTHHH---HHHHHHH
T ss_pred             cEEEECCceecCC--------------------------CeeCHHHHHHHHhhcccceEEEEEccCcccc---ccccccc
Confidence            6899999999943                          2244899999999999999999999998654   5666677


Q ss_pred             cCCCC
Q 025203          187 VGYHG  191 (256)
Q Consensus       187 ~G~~~  191 (256)
                      .++..
T Consensus        52 ~~~~~   56 (254)
T PF08282_consen   52 LGIDD   56 (254)
T ss_dssp             TTHCS
T ss_pred             ccchh
Confidence            77763

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=98.19  E-value=4.2e-06  Score=75.31  Aligned_cols=59  Identities=12%  Similarity=0.084  Sum_probs=45.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      ++.|++|||||||+...|                          ..+.+.+.+++|+++|++++++|||+...   ....
T Consensus         1 ~KLIftDLDGTLLd~~~~--------------------------~~~~a~~aL~~Lk~~GI~vVlaTGRt~~e---v~~l   51 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEFN--------------------------SYGAARQALAALERRSIPLVLYSLRTRAQ---LEHL   51 (302)
T ss_pred             CcEEEEeCCCCCcCCCCc--------------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            468999999999995421                          23668899999999999999999998654   4455


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|+..
T Consensus        52 ~~~Lgl~~   59 (302)
T PRK12702         52 CRQLRLEH   59 (302)
T ss_pred             HHHhCCCC
Confidence            56667754

>PTZ00174 phosphomannomutase; Provisional

Probab=98.18  E-value=3e-06  Score=74.50  Aligned_cols=47  Identities=28%  Similarity=0.396  Sum_probs=39.7

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      +.+.|++|||||||++.                          ...-|.+.+.+++++++|++++++|||+..
T Consensus         4 ~~klia~DlDGTLL~~~--------------------------~~is~~~~~ai~~l~~~Gi~~viaTGR~~~   50 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPR--------------------------NPITQEMKDTLAKLKSKGFKIGVVGGSDYP   50 (247)
T ss_pred             CCeEEEEECcCCCcCCC--------------------------CCCCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence            46799999999999854                          223377899999999999999999999864

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.17  E-value=3.7e-06  Score=73.49  Aligned_cols=58  Identities=12%  Similarity=0.304  Sum_probs=50.7

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH  186 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~  186 (256)
                      ++||+||||++..                           .++|++.+.++.++++|+++.++||.+...+....+.|.+
T Consensus         1 ~lfD~DGvL~~~~---------------------------~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~   53 (236)
T TIGR01460         1 FLFDIDGVLWLGH---------------------------KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS   53 (236)
T ss_pred             CEEeCcCccCcCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence            5899999999953                           3579999999999999999999999887777788888988


Q ss_pred             -cCCCC
Q 025203          187 -VGYHG  191 (256)
Q Consensus       187 -~G~~~  191 (256)
                       .|++.
T Consensus        54 ~~g~~~   59 (236)
T TIGR01460        54 LLGVDV   59 (236)
T ss_pred             hcCCCC
Confidence             78864

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=98.17  E-value=4e-06  Score=73.80  Aligned_cols=56  Identities=14%  Similarity=0.189  Sum_probs=44.9

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH  186 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~  186 (256)
                      +++||||||+++.                          ....+.+.+.+++|+++|++++++|||+...   ....+++
T Consensus         2 i~~DlDGTll~~~--------------------------~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~---~~~~~~~   52 (256)
T TIGR01486         2 IFTDLDGTLLDPH--------------------------GYDWGPAKEVLERLQELGIPVIPCTSKTAAE---VEYLRKE   52 (256)
T ss_pred             EEEcCCCCCcCCC--------------------------CcCchHHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHH
Confidence            7899999999854                          1133568999999999999999999998654   5667777


Q ss_pred             cCCCC
Q 025203          187 VGYHG  191 (256)
Q Consensus       187 ~G~~~  191 (256)
                      +|++.
T Consensus        53 ~~~~~   57 (256)
T TIGR01486        53 LGLED   57 (256)
T ss_pred             cCCCC
Confidence            88764

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=98.16  E-value=1.3e-05  Score=71.68  Aligned_cols=108  Identities=12%  Similarity=0.055  Sum_probs=71.7

Q ss_pred             CCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce------EEEecCC-C
Q 025203          130 ERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS------LELRGLE-D  202 (256)
Q Consensus       130 ~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~------lilr~~~-~  202 (256)
                      ..++.+...+.+.....++.||+.+|++.|+++|++++++|+....   .....|+++|+...+.      +....++ .
T Consensus       104 ~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~---~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvl  180 (277)
T TIGR01544       104 QAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGN---VLEEVLRQAGVYHPNVKVVSNFMDFDEDGVL  180 (277)
T ss_pred             CCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHH---HHHHHHHHcCCCCcCceEEeeeEEECCCCeE
Confidence            3455666666666678999999999999999999999999998753   4677788888843222      2233322 2


Q ss_pred             CCchhh----hhhHH-HHH-HHHh----cCCcEEEEEcCCccccCCCC
Q 025203          203 EYKKVQ----QYKAQ-VRK-RLVK----EGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       203 ~~kp~~----~~K~~-~r~-~l~~----~g~~i~~~iGD~~sDl~ga~  240 (256)
                      .+++.+    ..|.+ +.. ..+.    ..++-+++|||+.+|+.++.
T Consensus       181 tG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~  228 (277)
T TIGR01544       181 KGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD  228 (277)
T ss_pred             eCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence            233333    23322 221 1111    24566899999999999875

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=98.15  E-value=1.9e-05  Score=65.01  Aligned_cols=141  Identities=11%  Similarity=0.089  Sum_probs=78.0

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhc---cCCCCCCHH------HHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCC
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHG---FGGERLNAS------SWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSR  172 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~---~g~~~~~~~------~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR  172 (256)
                      .++..+|+|+|+||+.+..-.....   +.....+.+      .|.-=.........||+.++|+.|++. ++++++|++
T Consensus         4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~   82 (156)
T TIGR02250         4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMG   82 (156)
T ss_pred             CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCC
Confidence            5788999999999999763211000   000000000      000000012356789999999999955 999999999


Q ss_pred             CcccHHHHHHHHHhcCCCC-cc-e-EEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCCCCCcEEEec
Q 025203          173 RESLRSYTVDNLIHVGYHG-WA-S-LELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLP  249 (256)
Q Consensus       173 ~~~~r~~T~~~L~~~G~~~-~~-~-lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g~r~fklP  249 (256)
                      ++..   +...|+.++... ++ + ++.+++.. +   ...| .+.. +-....+.++.|+|++.-.....  .-.+.++
T Consensus        83 ~~~y---A~~vl~~ldp~~~~F~~ri~~rd~~~-~---~~~K-dL~~-i~~~d~~~vvivDd~~~~~~~~~--~N~i~i~  151 (156)
T TIGR02250        83 TRAY---AQAIAKLIDPDGKYFGDRIISRDESG-S---PHTK-SLLR-LFPADESMVVIIDDREDVWPWHK--RNLIQIE  151 (156)
T ss_pred             cHHH---HHHHHHHhCcCCCeeccEEEEeccCC-C---Cccc-cHHH-HcCCCcccEEEEeCCHHHhhcCc--cCEEEeC
Confidence            8765   556666666653 43 4 34444321 1   1122 1211 11223456889999986554433  3456665


Q ss_pred             CCCCC
Q 025203          250 NSMYY  254 (256)
Q Consensus       250 np~Y~  254 (256)
                      -..||
T Consensus       152 ~~~~f  156 (156)
T TIGR02250       152 PYNYF  156 (156)
T ss_pred             CcccC
Confidence            55553

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.10  E-value=2.7e-05  Score=66.92  Aligned_cols=135  Identities=19%  Similarity=0.273  Sum_probs=85.7

Q ss_pred             CCCCCcEEEEecCCCccCChHH-HHHhccCCCC--------CCHHHHHHHHHh-------------------cCCcchHH
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPY-FKKHGFGGER--------LNASSWEAWMKE-------------------SKAPALEH  151 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~-~~~~~~g~~~--------~~~~~~~~wv~~-------------------~~~~~~pg  151 (256)
                      ++..+-.++||.|.|++|-..+ +.....+.+.        +....|++++..                   ...|..||
T Consensus         9 ~~~~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pg   88 (256)
T KOG3120|consen    9 SSSPRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPG   88 (256)
T ss_pred             ccCCcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCcc
Confidence            3445678999999999985422 2222222111        112348888763                   36788999


Q ss_pred             HHHHHHHHHHcCC-eEEEEeCCCcccHHHHHHHHHhcCCCCcc--------------eEEEecCCC-C---CchhhhhhH
Q 025203          152 TLNLFHEIKNRGV-KIFLVSSRRESLRSYTVDNLIHVGYHGWA--------------SLELRGLED-E---YKKVQQYKA  212 (256)
Q Consensus       152 ~~ell~~L~~~G~-~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--------------~lilr~~~~-~---~kp~~~~K~  212 (256)
                      ++++++.+++.|. .+.|||....-.   ..++|+++|+...+              ++.+++... +   .+|.---|-
T Consensus        89 mv~lik~~ak~g~~eliIVSDaNsfF---Ie~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg  165 (256)
T KOG3120|consen   89 MVRLIKSAAKLGCFELIIVSDANSFF---IEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKG  165 (256)
T ss_pred             HHHHHHHHHhCCCceEEEEecCchhH---HHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhh
Confidence            9999999999996 999999887654   68888988886532              355555432 1   123222232


Q ss_pred             HHHHHH----HhcC--CcEEEEEcCCccccC
Q 025203          213 QVRKRL----VKEG--YRIWGVVGDQWSSFE  237 (256)
Q Consensus       213 ~~r~~l----~~~g--~~i~~~iGD~~sDl~  237 (256)
                      .+..++    .+.|  |+-.+|+||.-+|+=
T Consensus       166 ~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~C  196 (256)
T KOG3120|consen  166 LVLDELVASQLKDGVRYERLIYVGDGANDFC  196 (256)
T ss_pred             HHHHHHHHHHhhcCCceeeEEEEcCCCCCcC
Confidence            222222    2334  457899999999984

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.09  E-value=1.8e-05  Score=67.50  Aligned_cols=101  Identities=17%  Similarity=0.293  Sum_probs=79.9

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .+.+.+++||-|||....                           .++||+.+.++.|+.++.+|-|+||.+...+....
T Consensus         5 ~~v~gvLlDlSGtLh~e~---------------------------~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~   57 (262)
T KOG3040|consen    5 RAVKGVLLDLSGTLHIED---------------------------AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLH   57 (262)
T ss_pred             cccceEEEeccceEeccc---------------------------ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHH
Confidence            356799999999998843                           37899999999999999999999999988888889


Q ss_pred             HHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCC-ccccCCCC
Q 025203          182 DNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQ-WSSFEGLP  240 (256)
Q Consensus       182 ~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~-~sDl~ga~  240 (256)
                      +.|.+.||..-++-|..+.           +..+..+++.+++.-+.|.|. ..||.+-.
T Consensus        58 ~rL~rlgf~v~eeei~tsl-----------~aa~~~~~~~~lrP~l~v~d~a~~dF~gid  106 (262)
T KOG3040|consen   58 ERLQRLGFDVSEEEIFTSL-----------PAARQYLEENQLRPYLIVDDDALEDFDGID  106 (262)
T ss_pred             HHHHHhCCCccHHHhcCcc-----------HHHHHHHHhcCCCceEEEcccchhhCCCcc
Confidence            9999999985333333321           345677788889987778777 48887753

>PLN02887 hydrolase family protein

Probab=98.09  E-value=8.4e-06  Score=80.05  Aligned_cols=59  Identities=24%  Similarity=0.309  Sum_probs=46.1

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.+.|++||||||+++.                          ...-+.+++.+++++++|++++++|||+...   ...
T Consensus       307 ~iKLIa~DLDGTLLn~d--------------------------~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~---i~~  357 (580)
T PLN02887        307 KFSYIFCDMDGTLLNSK--------------------------SQISETNAKALKEALSRGVKVVIATGKARPA---VID  357 (580)
T ss_pred             CccEEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCeEEEEcCCCHHH---HHH
Confidence            35799999999999854                          1234778999999999999999999998654   445


Q ss_pred             HHHhcCCC
Q 025203          183 NLIHVGYH  190 (256)
Q Consensus       183 ~L~~~G~~  190 (256)
                      .++.+|+.
T Consensus       358 ~l~~L~l~  365 (580)
T PLN02887        358 ILKMVDLA  365 (580)
T ss_pred             HHHHhCcc
Confidence            55656653

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=98.06  E-value=9.3e-05  Score=65.57  Aligned_cols=88  Identities=19%  Similarity=0.462  Sum_probs=63.9

Q ss_pred             CCcEEEEecCCCccCChHHHHHh-----cc------CCCCCC--HHHHHHHH----HhcCCcch-HHHHHHHHHHHHcCC
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKH-----GF------GGERLN--ASSWEAWM----KESKAPAL-EHTLNLFHEIKNRGV  164 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~-----~~------g~~~~~--~~~~~~wv----~~~~~~~~-pg~~ell~~L~~~G~  164 (256)
                      ..--||||||+||+-...+....     .+      +.....  .+.+.+|+    ...+..++ +.+.++++.|+++|+
T Consensus        19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~   98 (252)
T PF11019_consen   19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI   98 (252)
T ss_pred             CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence            45689999999999765222111     01      101111  24566776    44444433 789999999999999


Q ss_pred             eEEEEeCCCcccHHHHHHHHHhcCCC
Q 025203          165 KIFLVSSRRESLRSYTVDNLIHVGYH  190 (256)
Q Consensus       165 ~i~ivTnR~~~~r~~T~~~L~~~G~~  190 (256)
                      +++-+|.|+...+..|.+.|+++|+.
T Consensus        99 ~v~alT~~~~~~~~~t~~~Lk~~gi~  124 (252)
T PF11019_consen   99 PVIALTARGPNMEDWTLRELKSLGID  124 (252)
T ss_pred             cEEEEcCCChhhHHHHHHHHHHCCCC
Confidence            99999999999999999999999987

The function is not known.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.04  E-value=1.1e-05  Score=73.74  Aligned_cols=59  Identities=8%  Similarity=0.219  Sum_probs=49.1

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR----GVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~----G~~i~ivTnR~~~~r~~T~  181 (256)
                      +++||+||||+++.                           +++|++.++++.|+++    |+++.++||.....+....
T Consensus         2 ~~ifD~DGvL~~g~---------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~   54 (321)
T TIGR01456         2 GFAFDIDGVLFRGK---------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARA   54 (321)
T ss_pred             EEEEeCcCceECCc---------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHH
Confidence            78999999999853                           4589999999999998    9999999999866555555


Q ss_pred             HHH-HhcCCCC
Q 025203          182 DNL-IHVGYHG  191 (256)
Q Consensus       182 ~~L-~~~G~~~  191 (256)
                      +.| +++|++.
T Consensus        55 ~~l~~~lG~~~   65 (321)
T TIGR01456        55 EEISSLLGVDV   65 (321)
T ss_pred             HHHHHHcCCCC
Confidence            666 7888863

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.01  E-value=1e-05  Score=72.41  Aligned_cols=97  Identities=19%  Similarity=0.332  Sum_probs=71.4

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      ++.+.++||.||.|..                           ...++||+.+.++.|++.|-.++|+||.+...|+...
T Consensus        20 ~~~DtfifDcDGVlW~---------------------------g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~   72 (306)
T KOG2882|consen   20 DSFDTFIFDCDGVLWL---------------------------GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYM   72 (306)
T ss_pred             hhcCEEEEcCCcceee---------------------------cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Confidence            3458999999998877                           2568999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCc-ceEEEecCC------CCCch--hhhh---hHHHHHHHHhcCCcE
Q 025203          182 DNLIHVGYHGW-ASLELRGLE------DEYKK--VQQY---KAQVRKRLVKEGYRI  225 (256)
Q Consensus       182 ~~L~~~G~~~~-~~lilr~~~------~~~kp--~~~~---K~~~r~~l~~~g~~i  225 (256)
                      +..+++|+... .+-|+.+..      .+.+|  ...|   -+.++++|++.|++.
T Consensus        73 kK~~~lG~~~v~e~~i~ssa~~~a~ylk~~~~~~k~Vyvig~~gi~~eL~~aG~~~  128 (306)
T KOG2882|consen   73 KKFAKLGFNSVKEENIFSSAYAIADYLKKRKPFGKKVYVIGEEGIREELDEAGFEY  128 (306)
T ss_pred             HHHHHhCccccCcccccChHHHHHHHHHHhCcCCCeEEEecchhhhHHHHHcCcee
Confidence            99999999843 222222211      00111  1111   267899999988654

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=97.97  E-value=1.4e-05  Score=66.70  Aligned_cols=137  Identities=15%  Similarity=0.124  Sum_probs=67.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHH-HHHH--hcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWE-AWMK--ESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~-~wv~--~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T  180 (256)
                      |+.||||+|.||.+-.-+..    ...||....=. .-+.  -.....+|++.+.|+.|+++|++++++|...+.  +.+
T Consensus         3 PklvvFDLD~TlW~~~~~~~----~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P--~~A   76 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTH----VGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP--DWA   76 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTS----S-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H--HHH
T ss_pred             CcEEEEcCcCCCCchhHhhc----cCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh--HHH
Confidence            68999999999999543211    12222110000 0000  123578999999999999999999999965543  357


Q ss_pred             HHHHHhcCCC----------CcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC-CCCCCcEEEec
Q 025203          181 VDNLIHVGYH----------GWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG-LPKPKRTFKLP  249 (256)
Q Consensus       181 ~~~L~~~G~~----------~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g-a~~g~r~fklP  249 (256)
                      .+.|+.++++          .++...   +-..+.. ......+++.. .-.|+..+++.|...-+.. ...|..++..|
T Consensus        77 ~~~L~~l~i~~~~~~~~~~~~~F~~~---eI~~gsK-~~Hf~~i~~~t-gI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~  151 (169)
T PF12689_consen   77 RELLKLLEIDDADGDGVPLIEYFDYL---EIYPGSK-TTHFRRIHRKT-GIPYEEMLFFDDESRNIEVVSKLGVTCVLVP  151 (169)
T ss_dssp             HHHHHHTT-C----------CCECEE---EESSS-H-HHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EEEE-S
T ss_pred             HHHHHhcCCCccccccccchhhcchh---heecCch-HHHHHHHHHhc-CCChhHEEEecCchhcceeeEecCcEEEEeC
Confidence            8888888888          332110   1011111 11222222211 1236678999998744433 23788888888


Q ss_pred             CC
Q 025203          250 NS  251 (256)
Q Consensus       250 np  251 (256)
                      |-
T Consensus       152 ~G  153 (169)
T PF12689_consen  152 DG  153 (169)
T ss_dssp             SS
T ss_pred             CC
Confidence            84

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=97.96  E-value=1.2e-05  Score=67.77  Aligned_cols=87  Identities=18%  Similarity=0.204  Sum_probs=59.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++.|++.++++.|+++|+++.++||..+..   +....+.+|+..  ..+.....  .||.+.....+.+.+... ..
T Consensus       125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~---a~~~~~~lgi~~--~~v~a~~~--~kP~~k~~~~~i~~l~~~-~~  196 (215)
T PF00702_consen  125 RDPLRPGAKEALQELKEAGIKVAILTGDNEST---ASAIAKQLGIFD--SIVFARVI--GKPEPKIFLRIIKELQVK-PG  196 (215)
T ss_dssp             EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHH---HHHHHHHTTSCS--EEEEESHE--TTTHHHHHHHHHHHHTCT-GG
T ss_pred             cCcchhhhhhhhhhhhccCcceeeeecccccc---cccccccccccc--cccccccc--ccccchhHHHHHHHHhcC-CC
Confidence            46789999999999999999999999986543   566677889953  22222211  355553223344444322 23


Q ss_pred             EEEEEcCCccccCCC
Q 025203          225 IWGVVGDQWSSFEGL  239 (256)
Q Consensus       225 i~~~iGD~~sDl~ga  239 (256)
                      .+++|||+.+|+.++
T Consensus       197 ~v~~vGDg~nD~~al  211 (215)
T PF00702_consen  197 EVAMVGDGVNDAPAL  211 (215)
T ss_dssp             GEEEEESSGGHHHHH
T ss_pred             EEEEEccCHHHHHHH
Confidence            799999999998764

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=97.95  E-value=3e-05  Score=71.49  Aligned_cols=100  Identities=15%  Similarity=0.143  Sum_probs=65.4

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhc-C-------CCCcceEEEecCCCC-----C--------
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHV-G-------YHGWASLELRGLEDE-----Y--------  204 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~-G-------~~~~~~lilr~~~~~-----~--------  204 (256)
                      ..+.||+.++|++|+++|++++++||++...   |...|+.+ |       +..++..++.+...+     +        
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~y---t~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~  259 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDY---TDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDV  259 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeC
Confidence            4568999999999999999999999998655   66666664 5       555565555443210     0        


Q ss_pred             -----c--------hhhhhhH---HHHHHHHhcCCcEEEEEcCCc-cccCCCC--CCCcEEEe
Q 025203          205 -----K--------KVQQYKA---QVRKRLVKEGYRIWGVVGDQW-SSFEGLP--KPKRTFKL  248 (256)
Q Consensus       205 -----k--------p~~~~K~---~~r~~l~~~g~~i~~~iGD~~-sDl~ga~--~g~r~fkl  248 (256)
                           +        +...|.-   .....+-......+++|||+. +|+.+++  .|.||+.+
T Consensus       260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI  322 (343)
T TIGR02244       260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAI  322 (343)
T ss_pred             CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEE
Confidence                 0        0112221   111222122235689999997 8999986  89999865

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PTZ00445 p36-lilke protein; Provisional

Probab=97.93  E-value=7.5e-05  Score=64.11  Aligned_cols=166  Identities=13%  Similarity=0.055  Sum_probs=100.9

Q ss_pred             HHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHH---Hh
Q 025203           67 DHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWM---KE  143 (256)
Q Consensus        67 ~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv---~~  143 (256)
                      ..++.|+.++++..  ...-+.|..+++.+   +..|.++|++|+|.||+.-..       ||  +     .++.   ..
T Consensus        11 ~~~~~~~~~~~~~~--~~~~~~~~~~v~~L---~~~GIk~Va~D~DnTlI~~Hs-------gG--~-----~~~~~~~~~   71 (219)
T PTZ00445         11 DAFKEYIESGLFDH--LNPHESADKFVDLL---NECGIKVIASDFDLTMITKHS-------GG--Y-----IDPDNDDIR   71 (219)
T ss_pred             HHHHHHHHhccccc--CCHHHHHHHHHHHH---HHcCCeEEEecchhhhhhhhc-------cc--c-----cCCCcchhh
Confidence            45788888877763  34455666666655   346799999999999998220       11  1     1110   00


Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc------------HHHHHHHHHhcCCCC-cceEEEec------C-C--
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL------------RSYTVDNLIHVGYHG-WASLELRG------L-E--  201 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~------------r~~T~~~L~~~G~~~-~~~lilr~------~-~--  201 (256)
                      --..+-|....+++.|++.|++|++||=.++..            .+.....|++-+..- ...++..-      + .  
T Consensus        72 ~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~  151 (219)
T PTZ00445         72 VLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYR  151 (219)
T ss_pred             hhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhh
Confidence            012345889999999999999999999776522            123344455333321 01111110      0 0  


Q ss_pred             --CCCchhhhhhHH-HHHHHHhcCC--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          202 --DEYKKVQQYKAQ-VRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       202 --~~~kp~~~~K~~-~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        .-.||++..|.- ..+.+++.|.  +.+++|.|...-+.+| ..|.+++.++++
T Consensus       152 ~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~  207 (219)
T PTZ00445        152 PLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN  207 (219)
T ss_pred             hhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence              123566655432 2334455554  4599999999888877 479999998876

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.90  E-value=8.9e-05  Score=63.76  Aligned_cols=141  Identities=14%  Similarity=0.115  Sum_probs=92.4

Q ss_pred             CCCcEEEEecCCCccCChHHHHH-----------hccC---------------------------CCCCCHHHHHHHHHh
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKK-----------HGFG---------------------------GERLNASSWEAWMKE  143 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~-----------~~~g---------------------------~~~~~~~~~~~wv~~  143 (256)
                      ...+.++||||+||..-+.-.+.           ..+|                           +..++...++++|..
T Consensus        13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~   92 (244)
T KOG3109|consen   13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG   92 (244)
T ss_pred             ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence            45689999999999875422211           1111                           344667778888864


Q ss_pred             ----cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc-ceEEEecCCC------CCchhhhhhH
Q 025203          144 ----SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW-ASLELRGLED------EYKKVQQYKA  212 (256)
Q Consensus       144 ----~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~-~~lilr~~~~------~~kp~~~~K~  212 (256)
                          ...+|=+-..++|-.|++++  ..+.||.+.   ..+.+.|+.+|+.+- +.++......      --||.+...+
T Consensus        93 ~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k---~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE  167 (244)
T KOG3109|consen   93 RLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYK---VHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFE  167 (244)
T ss_pred             cCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcH---HHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHH
Confidence                34677788899999998887  667899874   458999999999874 4444433221      1355553333


Q ss_pred             HHHHHHHhcCCcEEEEEcCCccccCCCC-CCCcEEE
Q 025203          213 QVRKRLVKEGYRIWGVVGDQWSSFEGLP-KPKRTFK  247 (256)
Q Consensus       213 ~~r~~l~~~g~~i~~~iGD~~sDl~ga~-~g~r~fk  247 (256)
                      ...+..--..++-+.++.|+..-+++|. .|.+++.
T Consensus       168 ~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvl  203 (244)
T KOG3109|consen  168 KAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVL  203 (244)
T ss_pred             HHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEE
Confidence            3332221122557999999999999884 6777654

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=97.89  E-value=5.7e-05  Score=68.26  Aligned_cols=124  Identities=19%  Similarity=0.130  Sum_probs=85.0

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhc-CCcchHHHHHHHHHHHHcC-CeEEEEeCCCcccHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKES-KAPALEHTLNLFHEIKNRG-VKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~-~~~~~pg~~ell~~L~~~G-~~i~ivTnR~~~~r~~T~~  182 (256)
                      -.+|-|||+|+..+.-..         --...|+.|.... ..+++||+-.+|+.|.+.| ..+||+||.+...-.-..+
T Consensus       162 igiISDiDDTV~~T~V~~---------~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~e  232 (373)
T COG4850         162 IGIISDIDDTVKVTGVTE---------GPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQE  232 (373)
T ss_pred             eeeeeccccceEeccccc---------chHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHH
Confidence            478899999999875211         0124577777654 4689999999999999999 9999999999877666667


Q ss_pred             HHHhcCCCCcceEEEecCCC----CCchhhhhh-HHHHHHHHhcCCcEEEEEcCC-ccccCC
Q 025203          183 NLIHVGYHGWASLELRGLED----EYKKVQQYK-AQVRKRLVKEGYRIWGVVGDQ-WSSFEG  238 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~----~~kp~~~~K-~~~r~~l~~~g~~i~~~iGD~-~sDl~g  238 (256)
                      .+.+.+|| +-.++++..+.    -..+....| ..++..+++.+-.-++.|||+ ..|.+.
T Consensus       233 fi~~~~~P-~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~DpeI  293 (373)
T COG4850         233 FITNRNFP-YGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYPDRKFVLVGDSGEHDPEI  293 (373)
T ss_pred             HHhcCCCC-CCchhHhhcCCcccccccchhhhcccHHHHHHHhCCCceEEEecCCCCcCHHH
Confidence            77777888 45555553320    001111122 456667777666667789998 466653

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=97.86  E-value=3.9e-05  Score=76.04  Aligned_cols=61  Identities=18%  Similarity=0.230  Sum_probs=46.9

Q ss_pred             CCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHH
Q 025203          101 GDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T  180 (256)
                      +..++.|++||||||+++..                          ...+.+.+.++.|+++|++++++|||+...   .
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~--------------------------~i~~~t~eAL~~L~ekGI~~VIATGRs~~~---i  463 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLT--------------------------YSYSTALDALRLLKDKELPLVFCSAKTMGE---Q  463 (694)
T ss_pred             CceeeEEEEECcCCCcCCCC--------------------------ccCHHHHHHHHHHHHcCCeEEEEeCCCHHH---H
Confidence            34678999999999999642                          122567889999999999999999998654   3


Q ss_pred             HHHHHhcCCC
Q 025203          181 VDNLIHVGYH  190 (256)
Q Consensus       181 ~~~L~~~G~~  190 (256)
                      ...++.+|+.
T Consensus       464 ~~l~~~Lgl~  473 (694)
T PRK14502        464 DLYRNELGIK  473 (694)
T ss_pred             HHHHHHcCCC
Confidence            4455666764

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=97.78  E-value=5.3e-05  Score=64.08  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=37.6

Q ss_pred             EEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          107 WIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       107 vvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      ++||+||||+++..                         .++-|.+.+.+++|+++|++++++|||+...
T Consensus         2 i~~D~DgTL~~~~~-------------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~   46 (204)
T TIGR01484         2 LFFDLDGTLLDPNA-------------------------HELSPETIEALERLREAGVKVVLVTGRSLAE   46 (204)
T ss_pred             EEEeCcCCCcCCCC-------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHH
Confidence            78999999998431                         2344889999999999999999999998654

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.75  E-value=6.4e-05  Score=65.89  Aligned_cols=60  Identities=13%  Similarity=0.093  Sum_probs=43.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      -.|+.|+|||||+...                       ...+..|...+++++++++|+.++++|||+...   ....+
T Consensus         2 ~li~tDlDGTLl~~~~-----------------------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~---~~~~~   55 (249)
T TIGR01485         2 LLLVSDLDNTLVDHTD-----------------------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHS---YKELQ   55 (249)
T ss_pred             eEEEEcCCCcCcCCCC-----------------------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHH---HHHHH
Confidence            3688999999997320                       013345889999999999999999999998654   34444


Q ss_pred             HhcCCC
Q 025203          185 IHVGYH  190 (256)
Q Consensus       185 ~~~G~~  190 (256)
                      +.++..
T Consensus        56 ~~~~~~   61 (249)
T TIGR01485        56 KQKPLL   61 (249)
T ss_pred             hcCCCC
Confidence            445554

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=97.74  E-value=0.00026  Score=69.11  Aligned_cols=128  Identities=19%  Similarity=0.152  Sum_probs=80.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.||-|||||+.-+.-.  .|.+.   +          -++.=.--|+.+|+...+++||++.|+|.|.-.+-..|...|
T Consensus       531 kIVISDIDGTITKSDvL--Gh~lp---~----------iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL  595 (738)
T KOG2116|consen  531 KIVISDIDGTITKSDVL--GHVLP---M----------IGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYL  595 (738)
T ss_pred             cEEEecCCCceEhhhhh--hhhhh---h----------hcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHH
Confidence            57788999999987632  11110   0          011223379999999999999999999999988777777666


Q ss_pred             Hh---cCCCCc-ceEEEecCCC---------CCchhhhhhHHHHHHHHhc---CCc-EEEEEcCCccccCCCC----CCC
Q 025203          185 IH---VGYHGW-ASLELRGLED---------EYKKVQQYKAQVRKRLVKE---GYR-IWGVVGDQWSSFEGLP----KPK  243 (256)
Q Consensus       185 ~~---~G~~~~-~~lilr~~~~---------~~kp~~~~K~~~r~~l~~~---g~~-i~~~iGD~~sDl~ga~----~g~  243 (256)
                      ++   -|..-. --+++.++..         .+||. .||-+....|+..   .++ .-.-+|...+|...-.    --.
T Consensus       596 ~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe-~FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~  674 (738)
T KOG2116|consen  596 KNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPE-VFKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLS  674 (738)
T ss_pred             HHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCch-hhhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCcc
Confidence            54   454333 3577776542         23332 3554544555432   233 3677899999987642    123


Q ss_pred             cEEEe
Q 025203          244 RTFKL  248 (256)
Q Consensus       244 r~fkl  248 (256)
                      |.|-+
T Consensus       675 RIFtI  679 (738)
T KOG2116|consen  675 RIFTI  679 (738)
T ss_pred             ceEEE
Confidence            66655

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=97.73  E-value=4.5e-05  Score=74.43  Aligned_cols=82  Identities=17%  Similarity=0.200  Sum_probs=62.1

Q ss_pred             CCcchHHHHHHHHHHHHcCC-eEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGV-KIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~-~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++.||+.+++++|+++|+ +++++||+++..   +...++++|++.++..+.        |  .-|....+.+...+ 
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~---a~~i~~~lgi~~~f~~~~--------p--~~K~~~i~~l~~~~-  425 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAV---AERVARELGIDEVHAELL--------P--EDKLEIVKELREKY-  425 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHH---HHHHHHHcCChhhhhccC--------c--HHHHHHHHHHHhcC-
Confidence            46889999999999999999 999999997643   778888999976542111        1  22344455555544 


Q ss_pred             cEEEEEcCCccccCCCC
Q 025203          224 RIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       224 ~i~~~iGD~~sDl~ga~  240 (256)
                      +.+++|||+.+|+.++.
T Consensus       426 ~~v~~vGDg~nD~~al~  442 (536)
T TIGR01512       426 GPVAMVGDGINDAPALA  442 (536)
T ss_pred             CEEEEEeCCHHHHHHHH
Confidence            67899999999998864

.

>PLN02423 phosphomannomutase

Probab=97.73  E-value=5.3e-05  Score=66.67  Aligned_cols=46  Identities=24%  Similarity=0.292  Sum_probs=36.4

Q ss_pred             CCCcEEE-EecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          102 DGKDAWI-FDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       102 ~~~~avv-fDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .++++++ |||||||+++.                          ...-|.+.+.+++|+++ ++++++|||..
T Consensus         4 ~~~~~i~~~D~DGTLl~~~--------------------------~~i~~~~~~ai~~l~~~-i~fviaTGR~~   50 (245)
T PLN02423          4 RKPGVIALFDVDGTLTAPR--------------------------KEATPEMLEFMKELRKV-VTVGVVGGSDL   50 (245)
T ss_pred             CccceEEEEeccCCCcCCC--------------------------CcCCHHHHHHHHHHHhC-CEEEEECCcCH
Confidence            3566666 99999999854                          12337889999999977 99999999953

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=97.71  E-value=0.0001  Score=72.27  Aligned_cols=82  Identities=17%  Similarity=0.220  Sum_probs=61.5

Q ss_pred             CCcchHHHHHHHHHHHHcC-CeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRG-VKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G-~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      +.+++||+.+++++|+++| ++++++||.+...   +...++++|++.++..+    .      +.-|....+.+...+ 
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~---a~~i~~~lgi~~~f~~~----~------p~~K~~~v~~l~~~~-  447 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSA---AEAVAAELGIDEVHAEL----L------PEDKLAIVKELQEEG-  447 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHH---HHHHHHHhCCCeeeccC----C------HHHHHHHHHHHHHcC-
Confidence            5789999999999999999 9999999997643   67788889997543221    1      123334445555444 


Q ss_pred             cEEEEEcCCccccCCCC
Q 025203          224 RIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       224 ~i~~~iGD~~sDl~ga~  240 (256)
                      ..+++|||+.+|+.++.
T Consensus       448 ~~v~~vGDg~nD~~al~  464 (556)
T TIGR01525       448 GVVAMVGDGINDAPALA  464 (556)
T ss_pred             CEEEEEECChhHHHHHh
Confidence            47899999999998864

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=97.67  E-value=0.00015  Score=71.19  Aligned_cols=81  Identities=17%  Similarity=0.257  Sum_probs=59.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++.|++.+++++|+++|++++++||.++..   +...++++|++ +    ....    +  +.-|....+.+++.+ +
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~---a~~ia~~lgi~-~----~~~~----~--p~~K~~~v~~l~~~~-~  467 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKT---AKAVAKELGIN-V----RAEV----L--PDDKAALIKELQEKG-R  467 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCHHH---HHHHHHHcCCc-E----EccC----C--hHHHHHHHHHHHHcC-C
Confidence            46789999999999999999999999997643   66777888986 1    1111    1  123344455555544 5


Q ss_pred             EEEEEcCCccccCCCC
Q 025203          225 IWGVVGDQWSSFEGLP  240 (256)
Q Consensus       225 i~~~iGD~~sDl~ga~  240 (256)
                      .+++|||+.+|..+..
T Consensus       468 ~v~~VGDg~nD~~al~  483 (562)
T TIGR01511       468 VVAMVGDGINDAPALA  483 (562)
T ss_pred             EEEEEeCCCccHHHHh
Confidence            7899999999998864

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=97.64  E-value=8.2e-05  Score=66.28  Aligned_cols=52  Identities=23%  Similarity=0.336  Sum_probs=40.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHH-cCCeEEEEeCCCccc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKN-RGVKIFLVSSRRESL  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~-~G~~i~ivTnR~~~~  176 (256)
                      ..+++||+||||++..+.                     .....+-|.+.+.|+.|++ .|+.++++|||+...
T Consensus        14 ~~li~~D~DGTLl~~~~~---------------------p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~   66 (266)
T PRK10187         14 NYAWFFDLDGTLAEIKPH---------------------PDQVVVPDNILQGLQLLATANDGALALISGRSMVE   66 (266)
T ss_pred             CEEEEEecCCCCCCCCCC---------------------cccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHH
Confidence            469999999999984310                     0123455899999999998 799999999998654

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=97.55  E-value=0.00021  Score=61.97  Aligned_cols=54  Identities=17%  Similarity=0.151  Sum_probs=38.2

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      .+++|+||||+++.+..                           +...+.++ ++++|++++++|||+...   ..+.+.
T Consensus         1 li~~DlDgTLl~~~~~~---------------------------~~~~~~~~-~~~~gi~~viaTGR~~~~---v~~~~~   49 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGL---------------------------ASFVELLR-GSGDAVGFGIATGRSVES---AKSRYA   49 (236)
T ss_pred             CeEEeccccccCCHHHH---------------------------HHHHHHHH-hcCCCceEEEEeCCCHHH---HHHHHH
Confidence            37899999999854321                           11226666 689999999999998654   455566


Q ss_pred             hcCCC
Q 025203          186 HVGYH  190 (256)
Q Consensus       186 ~~G~~  190 (256)
                      .+++.
T Consensus        50 ~l~l~   54 (236)
T TIGR02471        50 KLNLP   54 (236)
T ss_pred             hCCCC
Confidence            66664

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN03017 trehalose-phosphatase

Probab=97.54  E-value=0.00016  Score=67.23  Aligned_cols=66  Identities=12%  Similarity=0.055  Sum_probs=45.9

Q ss_pred             HHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEE
Q 025203           88 EVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIF  167 (256)
Q Consensus        88 ~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~  167 (256)
                      .|...++++......++-++++|+||||+.-...                     ...+.+-|++.+.|++|. +|++++
T Consensus        95 sal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~---------------------p~~a~i~~~~~~aL~~La-~~~~va  152 (366)
T PLN03017         95 SALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDD---------------------PDKAFMSSKMRRTVKKLA-KCFPTA  152 (366)
T ss_pred             hHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCC---------------------cccccCCHHHHHHHHHHh-cCCcEE
Confidence            3455555552333445678899999999941100                     012356699999999999 789999


Q ss_pred             EEeCCCcc
Q 025203          168 LVSSRRES  175 (256)
Q Consensus       168 ivTnR~~~  175 (256)
                      ++|||+..
T Consensus       153 IvSGR~~~  160 (366)
T PLN03017        153 IVTGRCID  160 (366)
T ss_pred             EEeCCCHH
Confidence            99999853

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=97.54  E-value=0.00024  Score=66.60  Aligned_cols=121  Identities=17%  Similarity=0.144  Sum_probs=81.1

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..+.||+|||||+.-+...=.-.++-|+.|               ---|+.+++.....+|++|.++|+|+-.+...|..
T Consensus       374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdw---------------th~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrs  438 (580)
T COG5083         374 NKKIVVSDIDGTITKSDALGHVKQMIGKDW---------------THNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRS  438 (580)
T ss_pred             CCcEEEEecCCcEEehhhHHHHHHHhccch---------------hhcchhhhhhhhccCceEEEEEecccccchhhhhh
Confidence            467999999999998763211111112222               22578888999999999999999999877666765


Q ss_pred             HH---HhcCCCCcc-eEEEecCCC---------CCchhhhhhHHHHHHHHhcCCcE---EEEEcCCccccCCC
Q 025203          183 NL---IHVGYHGWA-SLELRGLED---------EYKKVQQYKAQVRKRLVKEGYRI---WGVVGDQWSSFEGL  239 (256)
Q Consensus       183 ~L---~~~G~~~~~-~lilr~~~~---------~~kp~~~~K~~~r~~l~~~g~~i---~~~iGD~~sDl~ga  239 (256)
                      -|   .+-|+.-++ .++|.++..         -.|| -.+|.+..+.|+..+.+.   ..=+|...+|..+-
T Consensus       439 ylrnieQngykLpdgpviLspd~t~aal~relIlrkp-E~FKiayLndl~slf~e~~PFyAGFGNriTDvisY  510 (580)
T COG5083         439 YLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKP-EVFKIAYLNDLKSLFIEFDPFYAGFGNRITDVISY  510 (580)
T ss_pred             HHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcCh-HHHHHHHHHHHHHhhCcCChhhccccccchhheee
Confidence            55   456877664 567766531         1222 246777777777766543   34578888888764

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.52  E-value=0.00051  Score=54.67  Aligned_cols=120  Identities=14%  Similarity=0.066  Sum_probs=73.6

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHh--cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKE--SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~--~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      .+|+||.|+|+.|......-    .+||..-+=+.-.+.  .....+|.++++++.++..|+-+...|=..+   ..+.+
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl----~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~---~kA~~   73 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSL----EPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFE---DKAIK   73 (164)
T ss_pred             CcEEEeCCCcccccccchhc----CCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCch---HHHHH
Confidence            37999999999995422110    133321000111111  2357899999999999999998888887665   34789


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHH-hcC----CcEEEEEcCCcc
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLV-KEG----YRIWGVVGDQWS  234 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~-~~g----~~i~~~iGD~~s  234 (256)
                      .|+.+|+..|++.++-.+.. .|.-..+  .+...+. +.+    ...++++.|+.-
T Consensus        74 aLral~~~~yFhy~ViePhP-~K~~ML~--~llr~i~~er~~~ikP~~Ivy~DDR~i  127 (164)
T COG4996          74 ALRALDLLQYFHYIVIEPHP-YKFLMLS--QLLREINTERNQKIKPSEIVYLDDRRI  127 (164)
T ss_pred             HHHHhchhhhEEEEEecCCC-hhHHHHH--HHHHHHHHhhccccCcceEEEEecccc
Confidence            99999999999877765431 1111112  1222222 222    334889998853

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.49  E-value=4.2e-05  Score=66.87  Aligned_cols=97  Identities=18%  Similarity=0.115  Sum_probs=61.0

Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEE--EecC-CCCCchhhhhhHHHHHHHHhcCCc
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLE--LRGL-EDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~li--lr~~-~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      -+|++.++++.++++|+++ ++||++....   ...+...|...+...+  ...+ ...+||.+.......+.+.....+
T Consensus       139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~---~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~  214 (242)
T TIGR01459       139 DLDEFDELFAPIVARKIPN-ICANPDRGIN---QHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKN  214 (242)
T ss_pred             CHHHHHHHHHHHHhCCCcE-EEECCCEecc---CCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcc
Confidence            3699999999999999996 8899986542   2334444544333322  2222 235678775443333333111124


Q ss_pred             EEEEEcCC-ccccCCCC-CCCcEEEe
Q 025203          225 IWGVVGDQ-WSSFEGLP-KPKRTFKL  248 (256)
Q Consensus       225 i~~~iGD~-~sDl~ga~-~g~r~fkl  248 (256)
                      .+++|||+ .+|+.+|. +|.+++.+
T Consensus       215 ~~~~vGD~~~~Di~~a~~~G~~~i~v  240 (242)
T TIGR01459       215 RMLMVGDSFYTDILGANRLGIDTALV  240 (242)
T ss_pred             cEEEECCCcHHHHHHHHHCCCeEEEE
Confidence            59999999 59999984 68877643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=97.43  E-value=0.0011  Score=55.64  Aligned_cols=94  Identities=12%  Similarity=-0.029  Sum_probs=57.6

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcC----CCC---c-ceEEEecCCCCC----c--hhhh
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVG----YHG---W-ASLELRGLEDEY----K--KVQQ  209 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G----~~~---~-~~lilr~~~~~~----k--p~~~  209 (256)
                      .....-||.+++++.+++++++++++|+......   ...|++.+    +..   + ....+..++...    +  +-..
T Consensus        70 k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI---~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~  146 (220)
T COG4359          70 KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFI---YPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGH  146 (220)
T ss_pred             hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHH---HHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCC
Confidence            3467779999999999999999999999887653   23333332    211   0 111111111100    0  1112


Q ss_pred             hhHHHHHHHHhcCCcEEEEEcCCccccCCCCC
Q 025203          210 YKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPK  241 (256)
Q Consensus       210 ~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~  241 (256)
                      -|+...+++.+ .++-+.|+||+.+|+.++..
T Consensus       147 dK~~vI~~l~e-~~e~~fy~GDsvsDlsaakl  177 (220)
T COG4359         147 DKSSVIHELSE-PNESIFYCGDSVSDLSAAKL  177 (220)
T ss_pred             CcchhHHHhhc-CCceEEEecCCcccccHhhh
Confidence            34445555643 56668999999999999863

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=97.35  E-value=0.00011  Score=65.66  Aligned_cols=96  Identities=11%  Similarity=-0.032  Sum_probs=57.7

Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE----ecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL----RGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil----r~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ++++.++++.|+++|. ++++||++....  ....+...|...++..+.    +.....+||.+.......+.+ ....+
T Consensus       145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~--~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~-~~~~~  220 (279)
T TIGR01452       145 YAKLREACAHLREPGC-LFVATNRDPWHP--LSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENF-SIDPA  220 (279)
T ss_pred             HHHHHHHHHHHhcCCC-EEEEeCCCCCCC--CcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHh-CCChh
Confidence            5899999999999997 799999886431  111122223332322221    112234677774433333322 11235


Q ss_pred             EEEEEcCCc-cccCCC-CCCCcEEEe
Q 025203          225 IWGVVGDQW-SSFEGL-PKPKRTFKL  248 (256)
Q Consensus       225 i~~~iGD~~-sDl~ga-~~g~r~fkl  248 (256)
                      .+++|||+. +|+.+| .+|.+++.+
T Consensus       221 ~~lmIGD~~~tDI~~A~~aGi~si~V  246 (279)
T TIGR01452       221 RTLMVGDRLETDILFGHRCGMTTVLV  246 (279)
T ss_pred             hEEEECCChHHHHHHHHHcCCcEEEE
Confidence            699999995 999987 478887765

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.32  E-value=0.00096  Score=59.59  Aligned_cols=73  Identities=18%  Similarity=0.246  Sum_probs=57.0

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      +.+..||||+|+||+....                       ...-+-|.+.+-|++|+++|.-+++=|-....   ...
T Consensus       120 ~~phVIVfDlD~TLItd~~-----------------------~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~e---HV~  173 (297)
T PF05152_consen  120 EPPHVIVFDLDSTLITDEG-----------------------DVRIRDPAVYDSLRELKEQGCVLVLWSYGNRE---HVR  173 (297)
T ss_pred             CCCcEEEEECCCcccccCC-----------------------ccccCChHHHHHHHHHHHcCCEEEEecCCCHH---HHH
Confidence            4567999999999998541                       11235588899999999999988888877644   467


Q ss_pred             HHHHhcCCCCcceEEEecC
Q 025203          182 DNLIHVGYHGWASLELRGL  200 (256)
Q Consensus       182 ~~L~~~G~~~~~~lilr~~  200 (256)
                      ..|+++++.+++++++.+.
T Consensus       174 ~sl~~~~L~~~Fd~ii~~G  192 (297)
T PF05152_consen  174 HSLKELKLEGYFDIIICGG  192 (297)
T ss_pred             HHHHHhCCccccEEEEeCC
Confidence            8888889888888887653

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=97.27  E-value=0.0008  Score=69.51  Aligned_cols=92  Identities=17%  Similarity=0.239  Sum_probs=65.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCC-C----------------Cchh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED-E----------------YKKV  207 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~-~----------------~kp~  207 (256)
                      ..++.|++.+.++.|++.|+++.++||.....   +....++.|+...+...+.+... .                ....
T Consensus       526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~t---A~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~  602 (884)
T TIGR01522       526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQET---AVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARAS  602 (884)
T ss_pred             cCcchhHHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECC
Confidence            35889999999999999999999999987543   45556778986443222222110 0                1123


Q ss_pred             hhhhHHHHHHHHhcCCcEEEEEcCCccccCCCC
Q 025203          208 QQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       208 ~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~  240 (256)
                      |..|..+-+.+++.| .+++++||..+|..+.+
T Consensus       603 P~~K~~iv~~lq~~g-~~v~mvGDGvND~pAl~  634 (884)
T TIGR01522       603 PEHKMKIVKALQKRG-DVVAMTGDGVNDAPALK  634 (884)
T ss_pred             HHHHHHHHHHHHHCC-CEEEEECCCcccHHHHH
Confidence            556677778888777 57899999999997753

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PLN02151 trehalose-phosphatase

Probab=97.18  E-value=0.00072  Score=62.62  Aligned_cols=64  Identities=14%  Similarity=0.085  Sum_probs=45.0

Q ss_pred             HHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEE
Q 025203           89 VKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFL  168 (256)
Q Consensus        89 a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~i  168 (256)
                      |...++++......++.++++|+||||+.-.+.                     ...+.+-|++.+.|+.|. ++++++|
T Consensus        83 a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~---------------------P~~A~~~~~~~~aL~~La-~~~~vaI  140 (354)
T PLN02151         83 ALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDD---------------------PDRAFMSKKMRNTVRKLA-KCFPTAI  140 (354)
T ss_pred             HHHHHHHHHHhhcCCceEEEEecCccCCCCCCC---------------------cccccCCHHHHHHHHHHh-cCCCEEE
Confidence            344444442333345679999999999953210                     123567799999999999 5679999


Q ss_pred             EeCCCc
Q 025203          169 VSSRRE  174 (256)
Q Consensus       169 vTnR~~  174 (256)
                      +|||+.
T Consensus       141 vSGR~~  146 (354)
T PLN02151        141 VSGRCR  146 (354)
T ss_pred             EECCCH
Confidence            999974

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=96.99  E-value=0.00027  Score=62.55  Aligned_cols=96  Identities=8%  Similarity=0.067  Sum_probs=60.5

Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC----CCCchhhhhhHHHHHHHHhcC--
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE----DEYKKVQQYKAQVRKRLVKEG--  222 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~----~~~kp~~~~K~~~r~~l~~~g--  222 (256)
                      +++..+.++.|++.|.+++++||++....   ...+...|...++..+....+    ..+||.+......   +++.|  
T Consensus       122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~---~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~---~~~~~~~  195 (257)
T TIGR01458       122 YQILNQAFRLLLDGAKPLLIAIGKGRYYK---RKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEA---LRATGCE  195 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEeCCCCCCc---CCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHH---HHHhCCC
Confidence            58888899999999999999999886541   222333344333322222211    1257766443333   33334  


Q ss_pred             CcEEEEEcCCc-cccCCC-CCCCcEEEecC
Q 025203          223 YRIWGVVGDQW-SSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       223 ~~i~~~iGD~~-sDl~ga-~~g~r~fklPn  250 (256)
                      .+.+++|||+. +|+.+| .+|.+++.+..
T Consensus       196 ~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~  225 (257)
T TIGR01458       196 PEEAVMIGDDCRDDVGGAQDCGMRGIQVRT  225 (257)
T ss_pred             hhhEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence            34599999996 999987 47888877743

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR00685 T6PP trehalose-phosphatase

Probab=96.96  E-value=0.0013  Score=57.54  Aligned_cols=51  Identities=27%  Similarity=0.462  Sum_probs=39.2

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc-CCeEEEEeCCCc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR-GVKIFLVSSRRE  174 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~-G~~i~ivTnR~~  174 (256)
                      ++.+++||+||||....+.                     ...+.+-|++.+.|+.|.+. +..++|+|||+.
T Consensus         2 ~~~~l~lD~DGTL~~~~~~---------------------p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~   53 (244)
T TIGR00685         2 RKRAFFFDYDGTLSEIVPD---------------------PDAAVVSDRLLTILQKLAARPHNAIWIISGRKF   53 (244)
T ss_pred             CcEEEEEecCccccCCcCC---------------------CcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence            4579999999999984310                     01256679999999999877 567899999964

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.93  E-value=0.0012  Score=53.65  Aligned_cols=128  Identities=16%  Similarity=0.098  Sum_probs=64.1

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.+|||+||||+.+...-..      +.+...- .-.........||+.+||+.+.+ .+.+++.|...+..-....+.|
T Consensus         1 k~LVlDLD~TLv~~~~~~~~------~~~~~~~-~~~~~~~v~~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~l   72 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPL------PYDFKII-DQRGGYYVKLRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDAL   72 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCT------T-SEEEE-TEEEEEEEEE-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCC------Cccccee-ccccceeEeeCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhh
Confidence            47899999999997632100      0000000 00000124467999999999954 5999999999876654455555


Q ss_pred             HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEec
Q 025203          185 IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLP  249 (256)
Q Consensus       185 ~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklP  249 (256)
                      ...+-. +...+.+......+.  .+.    +.|...|.  +-++.|.|+..-+...  ....+.+|
T Consensus        73 dp~~~~-~~~~~~r~~~~~~~~--~~~----KdL~~l~~~~~~vvivDD~~~~~~~~--~~N~i~v~  130 (159)
T PF03031_consen   73 DPNGKL-FSRRLYRDDCTFDKG--SYI----KDLSKLGRDLDNVVIVDDSPRKWALQ--PDNGIPVP  130 (159)
T ss_dssp             TTTTSS-EEEEEEGGGSEEETT--EEE------GGGSSS-GGGEEEEES-GGGGTTS--GGGEEE--
T ss_pred             hhhccc-ccccccccccccccc--ccc----cchHHHhhccccEEEEeCCHHHeecc--CCceEEec
Confidence            432211 344555543211110  111    34444453  5588999998765443  23445544

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=96.89  E-value=0.0023  Score=52.98  Aligned_cols=129  Identities=19%  Similarity=0.237  Sum_probs=77.3

Q ss_pred             EEEEecCCCccCCh-------HHHHHhccCC--CCC--------CHHHHHHHHHhcCC------cchHHHHHHHHHHHHc
Q 025203          106 AWIFDVDDTLLSTI-------PYFKKHGFGG--ERL--------NASSWEAWMKESKA------PALEHTLNLFHEIKNR  162 (256)
Q Consensus       106 avvfDiDgTlldn~-------~~~~~~~~g~--~~~--------~~~~~~~wv~~~~~------~~~pg~~ell~~L~~~  162 (256)
                      -+.+|||||+.+-.       |+|.+..-..  ..|        ..+.|.+|++..+.      ..-.++...|..++++
T Consensus         8 ~~ciDIDGtit~~~t~~~~~n~~f~kslse~d~t~y~lhkil~i~~ee~~k~~e~~ea~l~ke~l~~q~v~~~L~~~~e~   87 (194)
T COG5663           8 RCCIDIDGTITDDPTFAPYLNPAFEKSLSEADPTDYDLHKILNITTEEFWKWMEQTEAWLYKEALLAQLVKQVLPSLKEE   87 (194)
T ss_pred             heeeccCCceecCcccchhccHHHHhhhhhcccccccHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence            46799999999853       2222211111  112        24678888876443      3335556666666654


Q ss_pred             CCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCc-cccCCCC-
Q 025203          163 GVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQW-SSFEGLP-  240 (256)
Q Consensus       163 G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~-sDl~ga~-  240 (256)
                       .+++++|.|.......|-.+|....++ |+++-+.+-.  +|  +   ..+|      .+.+-+.+.|+. +-.+.+. 
T Consensus        88 -~~L~~itar~~dl~~iT~~~l~~q~ih-~~~l~i~g~h--~K--V---~~vr------th~idlf~ed~~~na~~iAk~  152 (194)
T COG5663          88 -HRLIYITARKADLTRITYAWLFIQNIH-YDHLEIVGLH--HK--V---EAVR------THNIDLFFEDSHDNAGQIAKN  152 (194)
T ss_pred             -ceeeeeehhhHHHHHHHHHHHHHhccc-hhhhhhhccc--cc--c---hhhH------hhccCccccccCchHHHHHHh
Confidence             689999999988878899999998888 6766554432  11  0   1111      234556677765 3333333 


Q ss_pred             CCCcEEEec
Q 025203          241 KPKRTFKLP  249 (256)
Q Consensus       241 ~g~r~fklP  249 (256)
                      +|.+++.+-
T Consensus       153 ~~~~vilin  161 (194)
T COG5663         153 AGIPVILIN  161 (194)
T ss_pred             cCCcEEEec
Confidence            666666653

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=96.84  E-value=0.0018  Score=57.84  Aligned_cols=55  Identities=20%  Similarity=0.276  Sum_probs=44.9

Q ss_pred             CCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc-CCeEEEEeCCCccc
Q 025203          101 GDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR-GVKIFLVSSRRESL  176 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~-G~~i~ivTnR~~~~  176 (256)
                      ..++.+++||.||||..-.++                     ...+++.++++++|+.|.++ ...++|+|||+...
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~---------------------p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~   70 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPH---------------------PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAE   70 (266)
T ss_pred             cccceEEEEeccccccccccC---------------------ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHH
Confidence            456889999999999996542                     12478899999999999998 45799999998644

>PLN02382 probable sucrose-phosphatase

Probab=96.83  E-value=0.0037  Score=59.27  Aligned_cols=65  Identities=12%  Similarity=0.081  Sum_probs=40.9

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHH
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSY  179 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~  179 (256)
                      ++..+-.|+.|||||||++..-                       +....+....+++++.++|+.++++|||+...   
T Consensus         5 ~~~~~~lI~sDLDGTLL~~~~~-----------------------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~---   58 (413)
T PLN02382          5 SGSPRLMIVSDLDHTMVDHHDP-----------------------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTL---   58 (413)
T ss_pred             cCCCCEEEEEcCCCcCcCCCCc-----------------------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHH---
Confidence            3445668899999999985200                       01111333445577899999999999998544   


Q ss_pred             HHHHHHhcCCC
Q 025203          180 TVDNLIHVGYH  190 (256)
Q Consensus       180 T~~~L~~~G~~  190 (256)
                      ..+.++..++.
T Consensus        59 ~~~l~~~~~l~   69 (413)
T PLN02382         59 YKELRKEKPLL   69 (413)
T ss_pred             HHHHHHhCCCC
Confidence            33333444443

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=96.80  E-value=0.0017  Score=65.75  Aligned_cols=53  Identities=17%  Similarity=0.271  Sum_probs=41.8

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHH-cCCeEEEEeCCCcc
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKN-RGVKIFLVSSRRES  175 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~-~G~~i~ivTnR~~~  175 (256)
                      .+++.++||+||||++....                     .....+-+.+.+.|+.|.+ .|+.++++|||+..
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~---------------------~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~  543 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPD---------------------PELAVPDKELRDLLRRLAADPNTDVAIISGRDRD  543 (726)
T ss_pred             ccceEEEEecCccccCCCCC---------------------cccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence            45789999999999985311                     0124566899999999999 49999999999854

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=96.79  E-value=0.0058  Score=55.46  Aligned_cols=63  Identities=13%  Similarity=0.202  Sum_probs=48.0

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc----CCeEEEEeCCCccc-
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR----GVKIFLVSSRRESL-  176 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~----G~~i~ivTnR~~~~-  176 (256)
                      ..+=+++|||||.|+-                           ...++|++.+.++.|.+.    .++.+|+||..... 
T Consensus        33 ~~~fgfafDIDGVL~R---------------------------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E   85 (389)
T KOG1618|consen   33 PPTFGFAFDIDGVLFR---------------------------GHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILE   85 (389)
T ss_pred             CCceeEEEecccEEEe---------------------------cCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcch
Confidence            4456999999999987                           256889999999999998    89999999976432 


Q ss_pred             HHHHHHHHHhcCCCC
Q 025203          177 RSYTVDNLIHVGYHG  191 (256)
Q Consensus       177 r~~T~~~L~~~G~~~  191 (256)
                      +..+.+.=+.+|+..
T Consensus        86 ~~rA~~lS~~Lgv~V  100 (389)
T KOG1618|consen   86 SSRAQELSALLGVEV  100 (389)
T ss_pred             hhHHHHHHHhhCCcc
Confidence            233444445678764

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=96.77  E-value=0.0031  Score=64.03  Aligned_cols=80  Identities=15%  Similarity=0.138  Sum_probs=58.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++.|++.+.++.|+++|+++.++||..+..   +....+++|++.+..     .    .  |.-|....+++++.  .
T Consensus       566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~---a~~ia~~lgi~~~~~-----~----~--p~~K~~~v~~l~~~--~  629 (741)
T PRK11033        566 QDTLRADARQAISELKALGIKGVMLTGDNPRA---AAAIAGELGIDFRAG-----L----L--PEDKVKAVTELNQH--A  629 (741)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCeecC-----C----C--HHHHHHHHHHHhcC--C
Confidence            45889999999999999999999999987543   667778899963211     1    1  22344455566543  3


Q ss_pred             EEEEEcCCccccCCCC
Q 025203          225 IWGVVGDQWSSFEGLP  240 (256)
Q Consensus       225 i~~~iGD~~sDl~ga~  240 (256)
                      .+++|||..+|..+..
T Consensus       630 ~v~mvGDgiNDapAl~  645 (741)
T PRK11033        630 PLAMVGDGINDAPAMK  645 (741)
T ss_pred             CEEEEECCHHhHHHHH
Confidence            6999999999987653

>PLN02580 trehalose-phosphatase

Probab=96.76  E-value=0.003  Score=59.23  Aligned_cols=53  Identities=17%  Similarity=0.164  Sum_probs=41.0

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      .++.+++||.||||..-.+.                     -..+.+-|++.+.|+.|.+. .+++|||||+...
T Consensus       117 ~k~~~LfLDyDGTLaPIv~~---------------------Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~  169 (384)
T PLN02580        117 GKKIALFLDYDGTLSPIVDD---------------------PDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDK  169 (384)
T ss_pred             cCCeEEEEecCCccCCCCCC---------------------cccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHH
Confidence            45679999999999863210                     12466779999999999998 5899999998543

>PRK10671 copA copper exporting ATPase; Provisional

Probab=96.71  E-value=0.0039  Score=64.07  Aligned_cols=82  Identities=18%  Similarity=0.310  Sum_probs=59.7

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++.|++.+.++.|+++|++++++||..+..   +...+++.|++.+.    ..-      .+..|....+.+...+ +
T Consensus       648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~---a~~ia~~lgi~~~~----~~~------~p~~K~~~i~~l~~~~-~  713 (834)
T PRK10671        648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTT---ANAIAKEAGIDEVI----AGV------LPDGKAEAIKRLQSQG-R  713 (834)
T ss_pred             cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcCCCEEE----eCC------CHHHHHHHHHHHhhcC-C
Confidence            45788999999999999999999999987543   56677888986422    111      1223555555665544 4


Q ss_pred             EEEEEcCCccccCCCC
Q 025203          225 IWGVVGDQWSSFEGLP  240 (256)
Q Consensus       225 i~~~iGD~~sDl~ga~  240 (256)
                      .+++|||+.+|+.+..
T Consensus       714 ~v~~vGDg~nD~~al~  729 (834)
T PRK10671        714 QVAMVGDGINDAPALA  729 (834)
T ss_pred             EEEEEeCCHHHHHHHH
Confidence            6899999999998753

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.61  E-value=0.0054  Score=61.79  Aligned_cols=80  Identities=16%  Similarity=0.204  Sum_probs=59.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++-|++.+.++.|+++|+++.++||-.+..   ....=+++|++.+..-+          -|+-|.+.-+++++.| +
T Consensus       535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~---A~~iA~~lGId~v~Ael----------lPedK~~~V~~l~~~g-~  600 (713)
T COG2217         535 ADELRPDAKEAIAALKALGIKVVMLTGDNRRT---AEAIAKELGIDEVRAEL----------LPEDKAEIVRELQAEG-R  600 (713)
T ss_pred             eCCCChhHHHHHHHHHHCCCeEEEEcCCCHHH---HHHHHHHcChHhheccC----------CcHHHHHHHHHHHhcC-C
Confidence            46788999999999999999999999976542   34444678996542111          1344566777887666 6


Q ss_pred             EEEEEcCCccccCC
Q 025203          225 IWGVVGDQWSSFEG  238 (256)
Q Consensus       225 i~~~iGD~~sDl~g  238 (256)
                      .+++|||..||--+
T Consensus       601 ~VamVGDGINDAPA  614 (713)
T COG2217         601 KVAMVGDGINDAPA  614 (713)
T ss_pred             EEEEEeCCchhHHH
Confidence            78999999999754

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=96.57  E-value=0.0018  Score=56.00  Aligned_cols=58  Identities=28%  Similarity=0.386  Sum_probs=40.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      +..|+.|||+||+...            |+   |            ..+...+.+|++.|++|+++|+++........+.
T Consensus         7 ~~lIFtDlD~TLl~~~------------ye---~------------~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~   59 (274)
T COG3769           7 PLLIFTDLDGTLLPHS------------YE---W------------QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKS   59 (274)
T ss_pred             ceEEEEcccCcccCCC------------CC---C------------CccchHHHHHHHcCCeEEEeccchHHHHHHHHHh
Confidence            4688899999999932            11   1            2345678899999999999999986553334444


Q ss_pred             HHhcC
Q 025203          184 LIHVG  188 (256)
Q Consensus       184 L~~~G  188 (256)
                      |.-.|
T Consensus        60 l~v~~   64 (274)
T COG3769          60 LGVQG   64 (274)
T ss_pred             cCCCC
Confidence            43333

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=96.55  E-value=0.014  Score=61.32  Aligned_cols=90  Identities=16%  Similarity=0.162  Sum_probs=62.7

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc------------------------eEEEecC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA------------------------SLELRGL  200 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~------------------------~lilr~~  200 (256)
                      ..|+-|++.+.+++|+++|+++.++|||....   +....++.|+..-.                        .+++.+.
T Consensus       566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~  642 (997)
T TIGR01106       566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT---AKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS  642 (997)
T ss_pred             cCCChHHHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence            46889999999999999999999999998654   44455666763110                        1233322


Q ss_pred             CCC-------------------CchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          201 EDE-------------------YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       201 ~~~-------------------~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      .-.                   ..-.|.-|..+-+.+++.|+ +++++||..+|..+
T Consensus       643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~-vv~~~GDG~ND~pa  698 (997)
T TIGR01106       643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGA-IVAVTGDGVNDSPA  698 (997)
T ss_pred             HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCC-EEEEECCCcccHHH
Confidence            100                   01134566777788888887 78999999999765

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=96.54  E-value=0.0093  Score=62.15  Aligned_cols=89  Identities=18%  Similarity=0.203  Sum_probs=62.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH-HhcCCCCcceEEEecCCCC-----------------Cch
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL-IHVGYHGWASLELRGLEDE-----------------YKK  206 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L-~~~G~~~~~~lilr~~~~~-----------------~kp  206 (256)
                      ..++-|++.+.++.|++.|+++.++||-...    |...+ ++.|+..-...++.+.+..                 ..-
T Consensus       577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~----tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~  652 (941)
T TIGR01517       577 KDPLRPGVREAVQECQRAGITVRMVTGDNID----TAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARS  652 (941)
T ss_pred             cCCCchhHHHHHHHHHHCCCEEEEECCCChH----HHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEEC
Confidence            4688999999999999999999999998653    44444 5578853222222221100                 011


Q ss_pred             hhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          207 VQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       207 ~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      .|+-|..+-+.+++.|+ +++++||..+|..+
T Consensus       653 sPe~K~~iV~~lq~~g~-vVam~GDGvNDapA  683 (941)
T TIGR01517       653 SPLDKQLLVLMLKDMGE-VVAVTGDGTNDAPA  683 (941)
T ss_pred             CHHHHHHHHHHHHHCCC-EEEEECCCCchHHH
Confidence            34567778888888886 78999999999855

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=96.53  E-value=0.013  Score=58.91  Aligned_cols=80  Identities=13%  Similarity=0.175  Sum_probs=59.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++-|++.+.++.|++.|+++.++||.....   +...-++.|++.+   +.+-       .|+-|....+.+++.|. 
T Consensus       444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~t---a~~iA~~lGI~~v---~a~~-------~PedK~~~v~~lq~~g~-  509 (675)
T TIGR01497       444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLT---AAAIAAEAGVDDF---IAEA-------TPEDKIALIRQEQAEGK-  509 (675)
T ss_pred             cccchhHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCEE---EcCC-------CHHHHHHHHHHHHHcCC-
Confidence            46889999999999999999999999976432   3444567898642   2211       13456666677766664 


Q ss_pred             EEEEEcCCccccCC
Q 025203          225 IWGVVGDQWSSFEG  238 (256)
Q Consensus       225 i~~~iGD~~sDl~g  238 (256)
                      ++.++||..+|..+
T Consensus       510 ~VamvGDG~NDapA  523 (675)
T TIGR01497       510 LVAMTGDGTNDAPA  523 (675)
T ss_pred             eEEEECCCcchHHH
Confidence            79999999999865

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=96.49  E-value=0.012  Score=58.95  Aligned_cols=79  Identities=16%  Similarity=0.239  Sum_probs=59.7

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH-HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL-IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L-~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++-|++.+.+++|++.|+++.++||-...    |.+.+ ++.|++.+   +-+-       .|+-|..+-+++++.| 
T Consensus       439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~----TA~aIA~elGI~~v---~A~~-------~PedK~~iV~~lQ~~G-  503 (673)
T PRK14010        439 KDVIKDGLVERFRELREMGIETVMCTGDNEL----TAATIAKEAGVDRF---VAEC-------KPEDKINVIREEQAKG-  503 (673)
T ss_pred             ecCCcHHHHHHHHHHHHCCCeEEEECCCCHH----HHHHHHHHcCCceE---EcCC-------CHHHHHHHHHHHHhCC-
Confidence            4688999999999999999999999998654    34444 56898642   2221       2456677777887776 


Q ss_pred             cEEEEEcCCccccCC
Q 025203          224 RIWGVVGDQWSSFEG  238 (256)
Q Consensus       224 ~i~~~iGD~~sDl~g  238 (256)
                      +++.++||..||-.+
T Consensus       504 ~~VaMtGDGvNDAPA  518 (673)
T PRK14010        504 HIVAMTGDGTNDAPA  518 (673)
T ss_pred             CEEEEECCChhhHHH
Confidence            578899999999654

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=96.31  E-value=0.0065  Score=62.57  Aligned_cols=51  Identities=18%  Similarity=0.425  Sum_probs=40.8

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHH-HHcCCeEEEEeCCCcc
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEI-KNRGVKIFLVSSRRES  175 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L-~~~G~~i~ivTnR~~~  175 (256)
                      .++.++++|+||||+...+.                       ...+-|++.++|+.| ++.|..++++|||+..
T Consensus       594 ~~~rlI~LDyDGTLlp~~~~-----------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~  645 (854)
T PLN02205        594 TTTRAILLDYDGTLMPQASI-----------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRK  645 (854)
T ss_pred             hcCeEEEEecCCcccCCccc-----------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHH
Confidence            35789999999999974421                       134558999999998 7789999999999754

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=96.26  E-value=0.023  Score=59.15  Aligned_cols=91  Identities=13%  Similarity=0.224  Sum_probs=60.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce----EEEecCCCC-----------------
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS----LELRGLEDE-----------------  203 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~----lilr~~~~~-----------------  203 (256)
                      ..|+.|++.+.++.|++.|+++.++||.....   +....++.|+..-+.    ..+.+....                 
T Consensus       535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~t---A~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~  611 (917)
T TIGR01116       535 LDPPRPEVADAIEKCRTAGIRVIMITGDNKET---AEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLF  611 (917)
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEecCCCHHH---HHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEE
Confidence            46889999999999999999999999986433   455556778753111    111110000                 


Q ss_pred             CchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCC
Q 025203          204 YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL  239 (256)
Q Consensus       204 ~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga  239 (256)
                      ....|..|..+-+.+++.| ++++++||..+|..+-
T Consensus       612 ar~~P~~K~~iV~~lq~~g-~~va~iGDG~ND~~al  646 (917)
T TIGR01116       612 SRVEPSHKSELVELLQEQG-EIVAMTGDGVNDAPAL  646 (917)
T ss_pred             EecCHHHHHHHHHHHHhcC-CeEEEecCCcchHHHH
Confidence            0012345666667777666 4778999999999764

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=96.20  E-value=0.024  Score=56.99  Aligned_cols=79  Identities=16%  Similarity=0.239  Sum_probs=58.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH-HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL-IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L-~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      +.++-|++.+.+++|++.|+++.++||-...    |.+.+ ++.|++.   .+-+.       .|+-|..+-+++++.| 
T Consensus       443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~----TA~aIA~elGId~---v~A~~-------~PedK~~iV~~lQ~~G-  507 (679)
T PRK01122        443 KDIVKPGIKERFAELRKMGIKTVMITGDNPL----TAAAIAAEAGVDD---FLAEA-------TPEDKLALIRQEQAEG-  507 (679)
T ss_pred             eccCchhHHHHHHHHHHCCCeEEEECCCCHH----HHHHHHHHcCCcE---EEccC-------CHHHHHHHHHHHHHcC-
Confidence            4577899999999999999999999997643    34444 5679864   22221       2455667777787766 


Q ss_pred             cEEEEEcCCccccCC
Q 025203          224 RIWGVVGDQWSSFEG  238 (256)
Q Consensus       224 ~i~~~iGD~~sDl~g  238 (256)
                      +++.++||..||-.+
T Consensus       508 ~~VaMtGDGvNDAPA  522 (679)
T PRK01122        508 RLVAMTGDGTNDAPA  522 (679)
T ss_pred             CeEEEECCCcchHHH
Confidence            578999999999654

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=96.19  E-value=0.029  Score=57.15  Aligned_cols=89  Identities=18%  Similarity=0.232  Sum_probs=60.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc----ceEEEecCC-----------------CC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW----ASLELRGLE-----------------DE  203 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~----~~lilr~~~-----------------~~  203 (256)
                      ..|+-|++.+.++.|++.|+++.++||.....   +...-++.|+..-    +.+ ..+..                 --
T Consensus       440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t---A~~IA~~lGI~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~vf  515 (755)
T TIGR01647       440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAI---AKETARRLGLGTNIYTADVL-LKGDNRDDLPSGELGEMVEDADGF  515 (755)
T ss_pred             cCCChhhHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCCCCCcCHHHh-cCCcchhhCCHHHHHHHHHhCCEE
Confidence            35889999999999999999999999987543   3333456788531    000 00000                 00


Q ss_pred             CchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          204 YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       204 ~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      ..-.|+-|..+-+.+++.|+ +++++||..||..+
T Consensus       516 Ar~~Pe~K~~iV~~lq~~G~-~VamvGDGvNDapA  549 (755)
T TIGR01647       516 AEVFPEHKYEIVEILQKRGH-LVGMTGDGVNDAPA  549 (755)
T ss_pred             EecCHHHHHHHHHHHHhcCC-EEEEEcCCcccHHH
Confidence            11134566777788888775 78999999999654

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=96.13  E-value=0.0063  Score=53.60  Aligned_cols=59  Identities=17%  Similarity=0.125  Sum_probs=37.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      +..++.|+||||++..+                          ..+....++++...+.++.++++|||+-.+   ..+.
T Consensus         2 ~~ll~sDlD~Tl~~~~~--------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~---~~~~   52 (247)
T PF05116_consen    2 PRLLASDLDGTLIDGDD--------------------------EALARLEELLEQQARPEILFVYVTGRSLES---VLRL   52 (247)
T ss_dssp             SEEEEEETBTTTBHCHH--------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHH---HHHH
T ss_pred             CEEEEEECCCCCcCCCH--------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHH---HHHH
Confidence            46899999999993221                          122333444544557789999999998654   5677


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++..+++.
T Consensus        53 ~~~~~l~~   60 (247)
T PF05116_consen   53 LREYNLPQ   60 (247)
T ss_dssp             HHHCT-EE
T ss_pred             HHhCCCCC
Confidence            77777764

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=96.11  E-value=0.03  Score=44.69  Aligned_cols=80  Identities=19%  Similarity=0.215  Sum_probs=57.5

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcE
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRI  225 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i  225 (256)
                      ...|+.+.+.++.|++. +.|++.||-....   ..+.++-.|++. ..++-..       +++-|..+.++|++ -|..
T Consensus        29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gs---l~~lae~~gi~~-~rv~a~a-------~~e~K~~ii~eLkk-~~~k   95 (152)
T COG4087          29 GKLFSEVSETIQELHDM-VDIYIASGDRKGS---LVQLAEFVGIPV-ERVFAGA-------DPEMKAKIIRELKK-RYEK   95 (152)
T ss_pred             cEEcHhhHHHHHHHHHh-heEEEecCCcchH---HHHHHHHcCCce-eeeeccc-------CHHHHHHHHHHhcC-CCcE
Confidence            56789999999999999 9999999965443   345556678873 3333222       24556667777765 4567


Q ss_pred             EEEEcCCccccCC
Q 025203          226 WGVVGDQWSSFEG  238 (256)
Q Consensus       226 ~~~iGD~~sDl~g  238 (256)
                      +++|||..+|+.+
T Consensus        96 ~vmVGnGaND~la  108 (152)
T COG4087          96 VVMVGNGANDILA  108 (152)
T ss_pred             EEEecCCcchHHH
Confidence            8899999999765

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=96.10  E-value=0.034  Score=57.55  Aligned_cols=89  Identities=19%  Similarity=0.218  Sum_probs=60.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCC----------------Cchhh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDE----------------YKKVQ  208 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~----------------~kp~~  208 (256)
                      ..|+-|++.+.++.|++.|+++.++||-....   +...=++.|+.. ...+...+-+.                ..-.|
T Consensus       513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~t---A~aIA~~lGI~~-~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~P  588 (867)
T TIGR01524       513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIV---TARICQEVGIDA-NDFLLGADIEELSDEELARELRKYHIFARLTP  588 (867)
T ss_pred             eCCCchhHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCC-CCeeecHhhhhCCHHHHHHHhhhCeEEEECCH
Confidence            46889999999999999999999999976432   333346678852 12221111000                00124


Q ss_pred             hhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          209 QYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       209 ~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      +-|..+-+.+++.|+ +++++||..+|..+
T Consensus       589 e~K~~iV~~lq~~G~-vVam~GDGvNDapA  617 (867)
T TIGR01524       589 MQKSRIIGLLKKAGH-TVGFLGDGINDAPA  617 (867)
T ss_pred             HHHHHHHHHHHhCCC-EEEEECCCcccHHH
Confidence            566777788888775 78899999999765

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=96.06  E-value=0.035  Score=57.67  Aligned_cols=89  Identities=18%  Similarity=0.234  Sum_probs=60.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCC----------------CCchhh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED----------------EYKKVQ  208 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~----------------~~kp~~  208 (256)
                      ..|+-|++.+.++.|++.|+++.++||-....   +...-++.|+.. +..+...+-+                -..-.|
T Consensus       548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t---A~~IA~~lGI~~-~~v~~G~el~~l~~~el~~~~~~~~VfAr~sP  623 (902)
T PRK10517        548 LDPPKETTAPALKALKASGVTVKILTGDSELV---AAKVCHEVGLDA-GEVLIGSDIETLSDDELANLAERTTLFARLTP  623 (902)
T ss_pred             hCcchhhHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCc-cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCH
Confidence            46889999999999999999999999976532   333446678852 1221111100                001134


Q ss_pred             hhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          209 QYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       209 ~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      +-|..+-+.+++.|+ +++++||..||..+
T Consensus       624 e~K~~IV~~Lq~~G~-vVam~GDGvNDaPA  652 (902)
T PRK10517        624 MHKERIVTLLKREGH-VVGFMGDGINDAPA  652 (902)
T ss_pred             HHHHHHHHHHHHCCC-EEEEECCCcchHHH
Confidence            567778888887774 78999999999755

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=96.04  E-value=0.043  Score=52.52  Aligned_cols=117  Identities=21%  Similarity=0.288  Sum_probs=69.7

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHH
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSY  179 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~  179 (256)
                      .+..+++.|+|+|+||.-..  ....+..+-..+        ..+..+++..-.+++..|+++|+-++++|-..+.-   
T Consensus       218 ~g~~kK~LVLDLDNTLWGGV--IGedGv~GI~Ls--------~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~d---  284 (574)
T COG3882         218 SGKSKKALVLDLDNTLWGGV--IGEDGVDGIRLS--------NSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKD---  284 (574)
T ss_pred             hCcccceEEEecCCcccccc--cccccccceeec--------CCCCchhHHHHHHHHHHHHhccEEEEEecCCchhh---
Confidence            45668999999999998743  112111111111        01346778888999999999999999999876543   


Q ss_pred             HHHHHHhcCCCCcceEEEecCCCCC-chhhhhh-HHHHHHHHhc--CCcEEEEEcCCcc
Q 025203          180 TVDNLIHVGYHGWASLELRGLEDEY-KKVQQYK-AQVRKRLVKE--GYRIWGVVGDQWS  234 (256)
Q Consensus       180 T~~~L~~~G~~~~~~lilr~~~~~~-kp~~~~K-~~~r~~l~~~--g~~i~~~iGD~~s  234 (256)
                      ..+-.+++     .+.+++.++... +-.-..| +.+|+..++.  |.+-.+++.|++-
T Consensus       285 a~evF~kh-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~  338 (574)
T COG3882         285 AKEVFRKH-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPA  338 (574)
T ss_pred             HHHHHhhC-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHH
Confidence            33333332     344666554210 0011112 3455554544  5666889999974

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=96.01  E-value=0.012  Score=50.09  Aligned_cols=68  Identities=16%  Similarity=0.202  Sum_probs=49.0

Q ss_pred             ccCCCCCcEEEEecCCCccCCh-HHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203           98 SLAGDGKDAWIFDVDDTLLSTI-PYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus        98 ~~~~~~~~avvfDiDgTlldn~-~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      .+...+++.+|+||||||++.. +.        +            ....-.-|++.+||+.+.+ .+.|+|-|......
T Consensus        15 ~~~~~~kklLVLDLDeTLvh~~~~~--------~------------~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~y   73 (195)
T TIGR02245        15 NPPREGKKLLVLDIDYTLFDHRSPA--------E------------TGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKW   73 (195)
T ss_pred             CCCCCCCcEEEEeCCCceEcccccC--------C------------CceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHH
Confidence            3345678999999999999742 10        0            1123466999999999998 79999999988655


Q ss_pred             HHHHHHHHHhcCC
Q 025203          177 RSYTVDNLIHVGY  189 (256)
Q Consensus       177 r~~T~~~L~~~G~  189 (256)
                         ....+..+|.
T Consensus        74 ---a~~~l~~l~~   83 (195)
T TIGR02245        74 ---IEIKMTELGV   83 (195)
T ss_pred             ---HHHHHHHhcc
Confidence               4455555554

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=95.93  E-value=0.043  Score=57.07  Aligned_cols=88  Identities=23%  Similarity=0.249  Sum_probs=60.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCC-----------------Cchh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDE-----------------YKKV  207 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~-----------------~kp~  207 (256)
                      ..|+-|++.+.++.|++.|+++.++||-....   +...=++.|+.. ... +.+.+-.                 ..-.
T Consensus       548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~t---A~aIA~~lGI~~-~~v-i~G~el~~~~~~el~~~v~~~~VfAr~s  622 (903)
T PRK15122        548 LDPPKESAAPAIAALRENGVAVKVLTGDNPIV---TAKICREVGLEP-GEP-LLGTEIEAMDDAALAREVEERTVFAKLT  622 (903)
T ss_pred             cCccHHHHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCCC-CCc-cchHhhhhCCHHHHHHHhhhCCEEEEeC
Confidence            46889999999999999999999999976432   333335678852 111 1111100                 0113


Q ss_pred             hhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          208 QQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       208 ~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      |+-|..+-+.+++.|+ +++++||..||..+
T Consensus       623 Pe~K~~iV~~Lq~~G~-vVamtGDGvNDaPA  652 (903)
T PRK15122        623 PLQKSRVLKALQANGH-TVGFLGDGINDAPA  652 (903)
T ss_pred             HHHHHHHHHHHHhCCC-EEEEECCCchhHHH
Confidence            4567778888887774 78999999999754

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=95.89  E-value=0.029  Score=59.19  Aligned_cols=90  Identities=12%  Similarity=0.138  Sum_probs=61.2

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc----------ceEEEecCCCC-----------
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW----------ASLELRGLEDE-----------  203 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~----------~~lilr~~~~~-----------  203 (256)
                      ..|+-|++.+.++.|++.|+++.++||.....   +...-++.|+..-          ...++.+....           
T Consensus       644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t---A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~  720 (1053)
T TIGR01523       644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPET---AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK  720 (1053)
T ss_pred             ecCCchhHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence            46889999999999999999999999987543   3333456787421          11233322110           


Q ss_pred             ------CchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          204 ------YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       204 ------~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                            ..-.|.-|..+-+.+++.|+ +++++||..+|..+
T Consensus       721 ~~~~V~ar~sP~~K~~iV~~lq~~g~-~Vam~GDGvNDapa  760 (1053)
T TIGR01523       721 ALCLVIARCAPQTKVKMIEALHRRKA-FCAMTGDGVNDSPS  760 (1053)
T ss_pred             hcCeEEEecCHHHHHHHHHHHHhcCC-eeEEeCCCcchHHH
Confidence                  01134566677788887775 67899999999754

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=95.54  E-value=0.072  Score=44.94  Aligned_cols=92  Identities=16%  Similarity=0.148  Sum_probs=56.2

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh---cC-----CCCcceEEEecCCCCCchhhhhhHHHHH
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH---VG-----YHGWASLELRGLEDEYKKVQQYKAQVRK  216 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~---~G-----~~~~~~lilr~~~~~~kp~~~~K~~~r~  216 (256)
                      +++.+|.+.+.+++-+++|+++++-|+.+-..    ++.+-.   .|     |.+|++.-...   ++ ....| .   +
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~A----QkL~Fghs~agdL~~lfsGyfDttiG~---Kr-E~~SY-~---k  168 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA----QKLFFGHSDAGDLNSLFSGYFDTTIGK---KR-ESQSY-A---K  168 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchh----HHHhhcccccccHHhhhcceeeccccc---cc-cchhH-H---H
Confidence            57889999999999999999999999876432    221110   01     22333321111   11 01122 1   2


Q ss_pred             HHHhcCC--cEEEEEcCCccccCCC-CCCCcEEEe
Q 025203          217 RLVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       217 ~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      ....-|.  ..++++.|++.-+.++ .+|.+|..+
T Consensus       169 Ia~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~  203 (229)
T COG4229         169 IAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLA  203 (229)
T ss_pred             HHHhcCCCchheEEecCCHHHHHHHHhcchheeee
Confidence            2233343  4689999999999876 478887766

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=95.11  E-value=0.092  Score=53.32  Aligned_cols=90  Identities=14%  Similarity=0.262  Sum_probs=64.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce----EEEecCC-CC----------------
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS----LELRGLE-DE----------------  203 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~----lilr~~~-~~----------------  203 (256)
                      ..||.|++.+.++.+++.|++|..+||-....   .+..-++.|+...++    ..+.+.. +.                
T Consensus       582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~T---A~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vF  658 (972)
T KOG0202|consen  582 LDPPRPEVADAIELCRQAGIRVIMITGDNKET---AEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVF  658 (972)
T ss_pred             cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEE
Confidence            37999999999999999999999999987543   344446678765433    2222221 10                


Q ss_pred             CchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          204 YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       204 ~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      ..-.|..|..+-+.|++.| +++.+-||..+|--+
T Consensus       659 aR~~P~HK~kIVeaLq~~g-eivAMTGDGVNDApA  692 (972)
T KOG0202|consen  659 ARAEPQHKLKIVEALQSRG-EVVAMTGDGVNDAPA  692 (972)
T ss_pred             EecCchhHHHHHHHHHhcC-CEEEecCCCccchhh
Confidence            0113467778888888766 799999999999755

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=95.01  E-value=0.046  Score=50.91  Aligned_cols=116  Identities=20%  Similarity=0.212  Sum_probs=65.8

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccH----
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLR----  177 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r----  177 (256)
                      .+.+.+.||+|||+++|.+--.   |   +-++..|        ...+|.+..=++.|.+.|++++|.||.....|    
T Consensus        73 ~~~K~i~FD~dgtlI~t~sg~v---f---~~~~~dw--------~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~  138 (422)
T KOG2134|consen   73 GGSKIIMFDYDGTLIDTKSGKV---F---PKGSMDW--------RILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLE  138 (422)
T ss_pred             CCcceEEEecCCceeecCCcce---e---eccCccc--------eeeccccchhhhhhccCCeEEEEEecccccccCcch
Confidence            4568999999999999974210   0   0112223        45567777778899999999999999764222    


Q ss_pred             -----HHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcCCcE----EEEEcCCcc
Q 025203          178 -----SYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEGYRI----WGVVGDQWS  234 (256)
Q Consensus       178 -----~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g~~i----~~~iGD~~s  234 (256)
                           ......+.+.|.|.  .++... .+.-+||..--- +-++.+...+++|    ..++||--.
T Consensus       139 ~~~f~~Ki~~i~anl~vPi--~~~~A~~~~~yRKP~tGMw-e~~~~~~nd~~~Isek~s~fvgdaag  202 (422)
T KOG2134|consen  139 LEEFKKKIKAIVANLGVPI--QLLAAIIKGKYRKPSTGMW-EFLKRLENDSVEISEKASIFVGDAAG  202 (422)
T ss_pred             HHHHHHHHHHHHHhcCCce--EEeeeccCCcccCcchhHH-HHHHHHhhccceeeechhhhhhhhcc
Confidence                 22334455677773  222222 123345533111 1223334456654    346777543

>PLN02645 phosphoglycolate phosphatase

Probab=94.95  E-value=0.014  Score=53.02  Aligned_cols=90  Identities=14%  Similarity=-0.012  Sum_probs=48.6

Q ss_pred             HHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC----CCCchhhhhhHHHHHHHHhcC--CcEEE
Q 025203          154 NLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE----DEYKKVQQYKAQVRKRLVKEG--YRIWG  227 (256)
Q Consensus       154 ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~----~~~kp~~~~K~~~r~~l~~~g--~~i~~  227 (256)
                      ...+.|+.++-..+++||++....  ....+...|...+...+....+    .-+||.+......   ++..|  .+.++
T Consensus       177 ~a~~~l~~~~g~~~i~tn~d~~~~--~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a---~~~~~~~~~~~~  251 (311)
T PLN02645        177 YATLCIRENPGCLFIATNRDAVTH--LTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYL---ANKFGIEKSQIC  251 (311)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCCCC--CCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHH---HHHcCCCcccEE
Confidence            344455544446899999886321  0111222333322222222222    1247776443333   33334  34599


Q ss_pred             EEcCCc-cccCCC-CCCCcEEEe
Q 025203          228 VVGDQW-SSFEGL-PKPKRTFKL  248 (256)
Q Consensus       228 ~iGD~~-sDl~ga-~~g~r~fkl  248 (256)
                      +|||++ +|+.+| .+|.+++.+
T Consensus       252 ~VGD~~~~Di~~A~~aG~~~ilV  274 (311)
T PLN02645        252 MVGDRLDTDILFGQNGGCKTLLV  274 (311)
T ss_pred             EEcCCcHHHHHHHHHcCCCEEEE
Confidence            999998 999998 478887766

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=94.94  E-value=0.025  Score=49.07  Aligned_cols=46  Identities=20%  Similarity=0.202  Sum_probs=27.7

Q ss_pred             EEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcC-CeEEEEeCCCc
Q 025203          108 IFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRG-VKIFLVSSRRE  174 (256)
Q Consensus       108 vfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G-~~i~ivTnR~~  174 (256)
                      +||.||||..-.+.                     ...+.+.|++.++|+.|.+.. ..++++|||+.
T Consensus         1 ~lDyDGTL~p~~~~---------------------p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~   47 (235)
T PF02358_consen    1 FLDYDGTLAPIVDD---------------------PDAAVPPPELRELLRALAADPNNTVAIVSGRSL   47 (235)
T ss_dssp             EEE-TTTSS---S----------------------GGG----HHHHHHHHHHHHHSE--EEEE-SS-H
T ss_pred             CcccCCccCCCCCC---------------------ccccCCCHHHHHHHHHHhccCCCEEEEEEeCCH
Confidence            58999999984321                     134678899999999999874 48999999985

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=94.69  E-value=0.13  Score=53.69  Aligned_cols=89  Identities=20%  Similarity=0.335  Sum_probs=63.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH-HhcCCCCcc--eEEEecCCCCC-----------------
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL-IHVGYHGWA--SLELRGLEDEY-----------------  204 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L-~~~G~~~~~--~lilr~~~~~~-----------------  204 (256)
                      ..||-|++.+.++.|++.|+++..+||-...    |..+. ++.|+..-.  .+++.+..-..                 
T Consensus       545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~----TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfA  620 (917)
T COG0474         545 EDPPREDVKEAIEELREAGIKVWMITGDHVE----TAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFA  620 (917)
T ss_pred             cCCCCccHHHHHHHHHHCCCcEEEECCCCHH----HHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEE
Confidence            4789999999999999999999999997543    44444 557876432  23444332110                 


Q ss_pred             chhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          205 KKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       205 kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      .-.|.-|..+-+.+++.|+ +++++||..||.-+
T Consensus       621 RvsP~qK~~IV~~lq~~g~-vVamtGDGvNDapA  653 (917)
T COG0474         621 RVSPEQKARIVEALQKSGH-VVAMTGDGVNDAPA  653 (917)
T ss_pred             EcCHHHHHHHHHHHHhCCC-EEEEeCCCchhHHH
Confidence            1134567778888888864 78999999999865

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=94.58  E-value=0.12  Score=52.75  Aligned_cols=100  Identities=17%  Similarity=0.221  Sum_probs=69.1

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .|.-++.+=+||++.--..                       -..+..|++...++.|++.|++++++||-....   ..
T Consensus       701 ~g~tvv~v~vn~~l~gv~~-----------------------l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a---A~  754 (951)
T KOG0207|consen  701 KGQTVVYVAVNGQLVGVFA-----------------------LEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA---AR  754 (951)
T ss_pred             cCceEEEEEECCEEEEEEE-----------------------eccccchhHHHHHHHHHhcCceEEEEcCCCHHH---HH
Confidence            3556888888888776221                       135677999999999999999999999976432   33


Q ss_pred             HHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          182 DNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       182 ~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      ..=++.|++.   +  +.+..     |.-|.+..+++++.| ..+.+|||..||--+
T Consensus       755 svA~~VGi~~---V--~aev~-----P~~K~~~Ik~lq~~~-~~VaMVGDGINDaPA  800 (951)
T KOG0207|consen  755 SVAQQVGIDN---V--YAEVL-----PEQKAEKIKEIQKNG-GPVAMVGDGINDAPA  800 (951)
T ss_pred             HHHHhhCcce---E--EeccC-----chhhHHHHHHHHhcC-CcEEEEeCCCCccHH
Confidence            3335578542   2  22211     234566778887766 578899999998654

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=94.38  E-value=0.1  Score=46.25  Aligned_cols=152  Identities=20%  Similarity=0.213  Sum_probs=93.1

Q ss_pred             hhhHHHHHHHHHHHHHHHhccccc-C----CCCCcEEEEecCCCccCCh--HHHHHhccCCCCCCHHHHHHHHHhcC---
Q 025203           76 SQYKADSQRAAEEVKLYLSGCCSL-A----GDGKDAWIFDVDDTLLSTI--PYFKKHGFGGERLNASSWEAWMKESK---  145 (256)
Q Consensus        76 ~~Y~~d~~~~~~~a~~y~~~~~~~-~----~~~~~avvfDiDgTlldn~--~~~~~~~~g~~~~~~~~~~~wv~~~~---  145 (256)
                      +....|+.++++....-. .++.. .    .+..--|.||=|++|.|..  ..|++.+       -+.|.+......   
T Consensus        89 San~~DV~~Ai~~G~~Aa-~v~~~~~~~~~~~~qlRIAFDgDaVLfsDesE~vy~~~G-------L~~F~~~E~~~a~~P  160 (264)
T PF06189_consen   89 SANEDDVQEAIDAGIPAA-TVLPSPPDDDESDDQLRIAFDGDAVLFSDESERVYQEQG-------LEAFHEHEKENADKP  160 (264)
T ss_pred             eCCHHHHHHHHHcCCCcE-EeecCCCCCCCCCCceEEEEcCCeEeecCcchHhHHhcc-------HHHHHHHHHHhccCC
Confidence            345667777765443221 11111 1    1334589999999999864  3333322       233444433321   


Q ss_pred             --CcchHHHHHHHHHHHHc------CCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHH
Q 025203          146 --APALEHTLNLFHEIKNR------GVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKR  217 (256)
Q Consensus       146 --~~~~pg~~ell~~L~~~------G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~  217 (256)
                        .-|+..-+.-|.+++++      =+++++||.|+...-+-.++.|+.-|+..=+..+|.+-+         |..+.+.
T Consensus       161 l~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~---------K~~vL~~  231 (264)
T PF06189_consen  161 LPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGLP---------KGPVLKA  231 (264)
T ss_pred             CcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCc---------hhHHHHh
Confidence              23555666677777765      378999999987655668999999999843455666532         2334443


Q ss_pred             HHhcCCcEEEEEcCCccccCCCCCCCcEEEec
Q 025203          218 LVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLP  249 (256)
Q Consensus       218 l~~~g~~i~~~iGD~~sDl~ga~~g~r~fklP  249 (256)
                      +     +.-++++||..=++++..+.-+-.+|
T Consensus       232 ~-----~phIFFDDQ~~H~~~a~~~vps~hVP  258 (264)
T PF06189_consen  232 F-----RPHIFFDDQDGHLESASKVVPSGHVP  258 (264)
T ss_pred             h-----CCCEeecCchhhhhHhhcCCCEEecc
Confidence            3     34568999999888887666666666

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=94.28  E-value=0.19  Score=48.57  Aligned_cols=76  Identities=16%  Similarity=0.333  Sum_probs=55.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH-HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL-IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L-~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++.|++.+.++.|++.|+++.++||..+..    ...+ +..|+  +      ..     -.+..|...-+.+++.| 
T Consensus       345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~----a~~ia~~lgi--~------~~-----~~p~~K~~~v~~l~~~g-  406 (499)
T TIGR01494       345 EDPLRDDAKETISELREAGIRVIMLTGDNVLT----AKAIAKELGI--F------AR-----VTPEEKAALVEALQKKG-  406 (499)
T ss_pred             cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHH----HHHHHHHcCc--e------ec-----cCHHHHHHHHHHHHHCC-
Confidence            35788999999999999999999999987643    3333 34565  1      00     12456666666777767 


Q ss_pred             cEEEEEcCCccccCC
Q 025203          224 RIWGVVGDQWSSFEG  238 (256)
Q Consensus       224 ~i~~~iGD~~sDl~g  238 (256)
                      ..+.++||..+|..+
T Consensus       407 ~~v~~vGDg~nD~~a  421 (499)
T TIGR01494       407 RVVAMTGDGVNDAPA  421 (499)
T ss_pred             CEEEEECCChhhHHH
Confidence            458899999999854

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=94.06  E-value=0.043  Score=52.60  Aligned_cols=39  Identities=13%  Similarity=0.217  Sum_probs=29.0

Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhc
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHV  187 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~  187 (256)
                      -|....+|+.|++.|.++|++||.+-...+...+.+-..
T Consensus       185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~  223 (448)
T PF05761_consen  185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGP  223 (448)
T ss_dssp             -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGC
T ss_pred             CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCC
Confidence            478899999999999999999999887766666666433

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=93.98  E-value=0.16  Score=53.80  Aligned_cols=43  Identities=14%  Similarity=0.247  Sum_probs=33.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYH  190 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~  190 (256)
                      +.++-|++.+.++.|++.|+++.++||.....   +...-++.|+-
T Consensus       654 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T---A~~iA~~~gii  696 (1054)
T TIGR01657       654 ENPLKPDTKEVIKELKRASIRTVMITGDNPLT---AVHVARECGIV  696 (1054)
T ss_pred             ecCCCccHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCC
Confidence            46889999999999999999999999987543   22233556773

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=93.92  E-value=0.082  Score=48.81  Aligned_cols=34  Identities=21%  Similarity=0.385  Sum_probs=27.6

Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      -|..+.++.+|+++|.++|++||.|....+.-+.
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~  275 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMR  275 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCce
Confidence            3688999999999999999999999765433333

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=93.91  E-value=0.091  Score=53.94  Aligned_cols=64  Identities=9%  Similarity=0.073  Sum_probs=44.9

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR-GVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~-G~~i~ivTnR~~~~r~~T  180 (256)
                      .++.+++||.||||..-.+.         +-+         ...+.+-|++.++|+.|.+. +..|+|||||+...   .
T Consensus       505 a~~rll~LDyDGTL~~~~~~---------~~~---------p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~---L  563 (797)
T PLN03063        505 SNNRLLILGFYGTLTEPRNS---------QIK---------EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI---L  563 (797)
T ss_pred             ccCeEEEEecCccccCCCCC---------ccc---------cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH---H
Confidence            34679999999999953210         000         02256779999999999876 78999999997543   4


Q ss_pred             HHHHHh
Q 025203          181 VDNLIH  186 (256)
Q Consensus       181 ~~~L~~  186 (256)
                      .+++..
T Consensus       564 ~~~~~~  569 (797)
T PLN03063        564 DKNFGE  569 (797)
T ss_pred             HHHhCC
Confidence            555543

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=93.61  E-value=0.12  Score=53.78  Aligned_cols=70  Identities=13%  Similarity=0.105  Sum_probs=46.0

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR-GVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~-G~~i~ivTnR~~~~r~~T  180 (256)
                      .++.+++||.||||..-.+.-..            .-.-+....+.+-|+++++|+.|.+. +..|+|||||+...   .
T Consensus       589 a~~RLlfLDyDGTLap~~~~P~~------------~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~---L  653 (934)
T PLN03064        589 SNNRLLILGFNATLTEPVDTPGR------------RGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSV---L  653 (934)
T ss_pred             ccceEEEEecCceeccCCCCccc------------ccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHH---H
Confidence            35679999999999974321000            00000111355779999999999876 78999999998543   4


Q ss_pred             HHHHHh
Q 025203          181 VDNLIH  186 (256)
Q Consensus       181 ~~~L~~  186 (256)
                      .++|..
T Consensus       654 e~~fg~  659 (934)
T PLN03064        654 DENFGE  659 (934)
T ss_pred             HHHhCC
Confidence            555544

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=93.24  E-value=0.055  Score=38.39  Aligned_cols=44  Identities=20%  Similarity=0.095  Sum_probs=29.8

Q ss_pred             CchhhhhhHHHHHHHHhcCC--cEEEEEcCC-ccccCCCC-CCCcEEEecC
Q 025203          204 YKKVQQYKAQVRKRLVKEGY--RIWGVVGDQ-WSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       204 ~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~-~sDl~ga~-~g~r~fklPn  250 (256)
                      +||.+......   ++..+.  .-+++|||+ .+|+.+|+ +|.+++.+..
T Consensus         3 gKP~p~~~~~a---~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t   50 (75)
T PF13242_consen    3 GKPSPGMLEQA---LKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLT   50 (75)
T ss_dssp             STTSHHHHHHH---HHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESS
T ss_pred             CCCcHHHHHHH---HHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECC
Confidence            46766443333   333343  459999999 99999984 7888887754

...

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=92.77  E-value=0.06  Score=46.90  Aligned_cols=46  Identities=17%  Similarity=0.001  Sum_probs=27.7

Q ss_pred             CCchhhhhhHHHHHHHHhcCCcEEEEEcCCc-cccCCC-CCCCcEEEe
Q 025203          203 EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQW-SSFEGL-PKPKRTFKL  248 (256)
Q Consensus       203 ~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~-sDl~ga-~~g~r~fkl  248 (256)
                      .+||.+.......+.+....-+.+++|||+. +|+.+| .+|.+++.+
T Consensus       186 ~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v  233 (236)
T TIGR01460       186 VGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLV  233 (236)
T ss_pred             ecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEE
Confidence            3466664433333333111123358999998 899998 478887765

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=92.60  E-value=0.17  Score=44.40  Aligned_cols=96  Identities=14%  Similarity=0.030  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH-hcC-CCC-cceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEE
Q 025203          150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI-HVG-YHG-WASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIW  226 (256)
Q Consensus       150 pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~-~~G-~~~-~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~  226 (256)
                      +.....+..+ ++|.+ +++||.+....  +...+. ..| +-. ++...-+.....+||.+.......+.+ ....+.+
T Consensus       124 ~~l~~a~~~l-~~g~~-~i~tN~D~~~~--~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~-~~~~~~~  198 (249)
T TIGR01457       124 EKFATATLAI-RKGAH-FIGTNGDLAIP--TERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHL-GTEREET  198 (249)
T ss_pred             HHHHHHHHHH-HCCCe-EEEECCCCCCC--CCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHc-CCCcccE
Confidence            4445555555 45877 88999875331  000000 000 000 111112222334577775443333332 1234569


Q ss_pred             EEEcCCc-cccCCC-CCCCcEEEecC
Q 025203          227 GVVGDQW-SSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       227 ~~iGD~~-sDl~ga-~~g~r~fklPn  250 (256)
                      ++|||++ +|+.++ .+|.+++.+..
T Consensus       199 ~~VGD~~~~Di~~a~~~G~~~v~v~~  224 (249)
T TIGR01457       199 LMVGDNYLTDIRAGIDAGIDTLLVHT  224 (249)
T ss_pred             EEECCCchhhHHHHHHcCCcEEEEcC
Confidence            9999996 899998 47888877743

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=91.47  E-value=3.1  Score=40.56  Aligned_cols=37  Identities=8%  Similarity=0.169  Sum_probs=23.4

Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh-cCCCC
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH-VGYHG  191 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~-~G~~~  191 (256)
                      ..|.+.+   .++++|.. +++|+.++..   .+..++. +|++.
T Consensus       111 l~~~a~~---~~~~~g~~-vvVSASp~~~---Vepfa~~~LGid~  148 (497)
T PLN02177        111 VHPETWR---VFNSFGKR-YIITASPRIM---VEPFVKTFLGADK  148 (497)
T ss_pred             cCHHHHH---HHHhCCCE-EEEECCcHHH---HHHHHHHcCCCCE
Confidence            3455444   44567754 9999988654   4566655 68763

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=90.43  E-value=0.41  Score=41.82  Aligned_cols=98  Identities=11%  Similarity=0.214  Sum_probs=52.1

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCc--ccHHHHHHHHHhcCCCC---c-ceEEEecCCCCCchhhhhhHHHHHHHHh
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRE--SLRSYTVDNLIHVGYHG---W-ASLELRGLEDEYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~--~~r~~T~~~L~~~G~~~---~-~~lilr~~~~~~kp~~~~K~~~r~~l~~  220 (256)
                      +.++++.++++.++..+..+.++|+.+.  ..+......++..|+..   + ..+-+...+ ..|+     ..+++.++.
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~-~~K~-----~~l~~l~~~  210 (272)
T PRK10530        137 PTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKG-NSKG-----KRLTQWVEA  210 (272)
T ss_pred             cceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCC-CChH-----HHHHHHHHH
Confidence            3456777888878777776777776543  12222333334445431   0 001111111 1121     345555666


Q ss_pred             cCCc--EEEEEcCCccccCCCCCCCcEEEecC
Q 025203          221 EGYR--IWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       221 ~g~~--i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      .|..  .+++|||+.+|+.........+..-|
T Consensus       211 ~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgn  242 (272)
T PRK10530        211 QGWSMKNVVAFGDNFNDISMLEAAGLGVAMGN  242 (272)
T ss_pred             cCCCHHHeEEeCCChhhHHHHHhcCceEEecC
Confidence            6654  59999999999988642223444444

>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function

Probab=90.24  E-value=1.3  Score=33.73  Aligned_cols=72  Identities=24%  Similarity=0.262  Sum_probs=47.8

Q ss_pred             eEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCC----Cchhh-hhhHH-HHHHHHhcCCcEEEEEcCCc-cccC
Q 025203          165 KIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDE----YKKVQ-QYKAQ-VRKRLVKEGYRIWGVVGDQW-SSFE  237 (256)
Q Consensus       165 ~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~----~kp~~-~~K~~-~r~~l~~~g~~i~~~iGD~~-sDl~  237 (256)
                      ++++||+.+........+.|+..|||. ..+++++-+..    -++.. .+|.. +++.+...-....+.|||+- .|..
T Consensus         1 pf~YvS~SPwnly~~l~~Fl~~~~~P~-G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~Dpe   79 (100)
T PF09949_consen    1 PFFYVSNSPWNLYPFLRDFLRRNGFPA-GPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPE   79 (100)
T ss_pred             CEEEEcCCHHHHHHHHHHHHHhcCCCC-CceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHH
Confidence            478999999988888899999999984 55777765321    11122 36643 44444444445688999984 6654

>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known

Probab=87.54  E-value=5.1  Score=34.24  Aligned_cols=87  Identities=15%  Similarity=0.231  Sum_probs=60.9

Q ss_pred             HHHHHHHHH-HHHcCCeEEEEeCCCc-ccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhc--CCcE
Q 025203          150 EHTLNLFHE-IKNRGVKIFLVSSRRE-SLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKE--GYRI  225 (256)
Q Consensus       150 pg~~ell~~-L~~~G~~i~ivTnR~~-~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~--g~~i  225 (256)
                      ..++++.+. .++..--.+++|||.+ ...+...+.|...|+. ++.++|++.+....+...||......+...  ..+.
T Consensus        57 e~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L~-Fd~v~LKp~~~~~~sTm~fK~~~l~~ll~~Y~~~~e  135 (197)
T PF10307_consen   57 ENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGLE-FDAVCLKPENQRFSSTMDFKQAFLEDLLHTYKNAEE  135 (197)
T ss_pred             HHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCCC-ccEEEeCcccccCccccHHHHHHHHHHHHhcCCCCE
Confidence            556666654 4455777789999997 4455566677888888 788999987444456678998777766542  3356


Q ss_pred             EEEEcCCccccC
Q 025203          226 WGVVGDQWSSFE  237 (256)
Q Consensus       226 ~~~iGD~~sDl~  237 (256)
                      +-+..|+..=+.
T Consensus       136 I~IYeDR~~hvk  147 (197)
T PF10307_consen  136 IRIYEDRPKHVK  147 (197)
T ss_pred             EEEEcCCHHHHH
Confidence            778889876443

There are two characteristic sequence motifs, GGWW and TGR.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=86.96  E-value=1  Score=40.88  Aligned_cols=91  Identities=14%  Similarity=0.047  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc----eEEEecCCCCCchhhhhhHHHHHHHHh---cC
Q 025203          150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA----SLELRGLEDEYKKVQQYKAQVRKRLVK---EG  222 (256)
Q Consensus       150 pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~----~lilr~~~~~~kp~~~~K~~~r~~l~~---~g  222 (256)
                      +.....+++|++=|+ .|++||++...-  -.....-.|.-.+-    ...-|.+..-+||.+.    +++.+.+   .+
T Consensus       168 ~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~----m~~~l~~~~~i~  240 (306)
T KOG2882|consen  168 PKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTF----MFEYLLEKFNID  240 (306)
T ss_pred             HHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHH----HHHHHHHHcCCC
Confidence            555667888887776 678999986431  00011111111111    1122333333455443    3333322   23


Q ss_pred             CcEEEEEcCCc-cccCCC-CCCCcEEE
Q 025203          223 YRIWGVVGDQW-SSFEGL-PKPKRTFK  247 (256)
Q Consensus       223 ~~i~~~iGD~~-sDl~ga-~~g~r~fk  247 (256)
                      ..-+++|||+. +||.=| ..|.+|..
T Consensus       241 psRt~mvGDRL~TDIlFG~~~G~~TLL  267 (306)
T KOG2882|consen  241 PSRTCMVGDRLDTDILFGKNCGFKTLL  267 (306)
T ss_pred             cceEEEEcccchhhhhHhhccCcceEE
Confidence            44599999998 899844 45666543

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=86.49  E-value=1.6  Score=38.61  Aligned_cols=86  Identities=19%  Similarity=0.068  Sum_probs=44.7

Q ss_pred             HHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCC----CcceEEEecCCCCCchhhhhhHHHHHHHHhcC--C-cEEEEEc
Q 025203          158 EIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYH----GWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--Y-RIWGVVG  230 (256)
Q Consensus       158 ~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~----~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~-~i~~~iG  230 (256)
                      .++..++...++-..+....+...+.++..|+.    .+..-++... .  |.     ..++..++..|  . ..+++||
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~--Kg-----~al~~l~~~~~i~~~~~v~~~G  214 (273)
T PRK00192        143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-D--KG-----KAVRWLKELYRRQDGVETIALG  214 (273)
T ss_pred             HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-C--HH-----HHHHHHHHHHhccCCceEEEEc
Confidence            344556665555122233445566777766664    1111122221 1  11     22333333333  4 6799999


Q ss_pred             CCccccCCCCCCCcEEEecCC
Q 025203          231 DQWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       231 D~~sDl~ga~~g~r~fklPnp  251 (256)
                      |+.+|+.........+.+.|.
T Consensus       215 Ds~NDi~m~~~ag~~vam~NA  235 (273)
T PRK00192        215 DSPNDLPMLEAADIAVVVPGP  235 (273)
T ss_pred             CChhhHHHHHhCCeeEEeCCC
Confidence            999999886544455666554

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=86.41  E-value=2  Score=36.38  Aligned_cols=37  Identities=8%  Similarity=-0.169  Sum_probs=24.4

Q ss_pred             HHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEec
Q 025203          213 QVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLP  249 (256)
Q Consensus       213 ~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklP  249 (256)
                      +++..++..|.  +.+++|||+.+|+.........|.||
T Consensus       183 al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~~  221 (221)
T TIGR02463       183 AANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVIK  221 (221)
T ss_pred             HHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEeC
Confidence            34444555564  46999999999998764333555554

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=86.22  E-value=1.7  Score=37.32  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=33.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCC
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRR  173 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~  173 (256)
                      .-.++||+||||.-..                          ....|.+.++|+.|+++ +.|.+|-|..
T Consensus        11 ~~l~lfdvdgtLt~~r--------------------------~~~~~e~~~~l~~lr~~-v~ig~VggsD   53 (252)
T KOG3189|consen   11 ETLCLFDVDGTLTPPR--------------------------QKVTPEMLEFLQKLRKK-VTIGFVGGSD   53 (252)
T ss_pred             ceEEEEecCCcccccc--------------------------ccCCHHHHHHHHHHhhh-eEEEEeecHH
Confidence            4478999999998732                          45568889999987765 7788887765

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=85.46  E-value=7.8  Score=34.27  Aligned_cols=103  Identities=15%  Similarity=0.075  Sum_probs=57.5

Q ss_pred             CCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-----C-C----
Q 025203          132 LNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-----L-E----  201 (256)
Q Consensus       132 ~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-----~-~----  201 (256)
                      ++.....+-+........+|+.+|++.|+++++++.+.|+.-   -+.....|++.|...-.--+++.     + +    
T Consensus        75 l~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGl---gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g  151 (246)
T PF05822_consen   75 LTKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGL---GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG  151 (246)
T ss_dssp             -BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEE---HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE
T ss_pred             cCHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCc---HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee
Confidence            455567777777888999999999999999999999999874   34577788877643211111111     1 1    


Q ss_pred             CCCch--hhhhhHH-------HHHHHHhcCCcEEEEEcCCccccCCCC
Q 025203          202 DEYKK--VQQYKAQ-------VRKRLVKEGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       202 ~~~kp--~~~~K~~-------~r~~l~~~g~~i~~~iGD~~sDl~ga~  240 (256)
                      .+. |  ++..|.+       ..+.+  .+.+-++.+||+..|+..+.
T Consensus       152 F~~-~lIH~~NKn~~~l~~~~~~~~~--~~R~NvlLlGDslgD~~Ma~  196 (246)
T PF05822_consen  152 FKG-PLIHTFNKNESALEDSPYFKQL--KKRTNVLLLGDSLGDLHMAD  196 (246)
T ss_dssp             E-S-S---TT-HHHHHHTTHHHHHCT--TT--EEEEEESSSGGGGTTT
T ss_pred             cCC-CceEEeeCCcccccCchHHHHh--ccCCcEEEecCccCChHhhc
Confidence            001 1  2222321       12222  23456889999999998765

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=85.14  E-value=3.4  Score=40.40  Aligned_cols=79  Identities=14%  Similarity=0.193  Sum_probs=53.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH-HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL-IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L-~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      +....||.+|=+.+|++.|++.+.+||-.+-    |.... +.+|.++|    +..    .+  |+-|-...++-++ +-
T Consensus       445 kDivK~Gi~ERf~elR~MgIkTvM~TGDN~~----TAa~IA~EAGVDdf----iAe----at--PEdK~~~I~~eQ~-~g  509 (681)
T COG2216         445 KDIVKPGIKERFAELRKMGIKTVMITGDNPL----TAAAIAAEAGVDDF----IAE----AT--PEDKLALIRQEQA-EG  509 (681)
T ss_pred             hhhcchhHHHHHHHHHhcCCeEEEEeCCCHH----HHHHHHHHhCchhh----hhc----CC--hHHHHHHHHHHHh-cC
Confidence            3445699999999999999999999997653    45544 45788763    111    12  2333333333233 34


Q ss_pred             cEEEEEcCCccccCC
Q 025203          224 RIWGVVGDQWSSFEG  238 (256)
Q Consensus       224 ~i~~~iGD~~sDl~g  238 (256)
                      +.+.+.||.-+|--+
T Consensus       510 rlVAMtGDGTNDAPA  524 (681)
T COG2216         510 RLVAMTGDGTNDAPA  524 (681)
T ss_pred             cEEEEcCCCCCcchh
Confidence            789999999999754

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=85.13  E-value=7.6  Score=36.50  Aligned_cols=68  Identities=21%  Similarity=0.281  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHH
Q 025203           80 ADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEI  159 (256)
Q Consensus        80 ~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L  159 (256)
                      .|+..+.|.|+...-.    +..+.+-|-||=|+||.+--          ..+.          ...+.+|-.+    .|
T Consensus       127 NDvR~ILN~AQi~al~----~~~~L~LvTFDgDvTLY~DG----------~sl~----------~d~pvi~~ii----~L  178 (408)
T PF06437_consen  127 NDVRHILNTAQIMALA----KNYGLKLVTFDGDVTLYEDG----------ASLE----------PDNPVIPRII----KL  178 (408)
T ss_pred             HHHHHHHHHHHHHHhc----ccCCceEEEEcCCcccccCC----------CCCC----------CCchHHHHHH----HH
Confidence            4777777777654321    12367899999999999843          2221          1234444444    56


Q ss_pred             HHcCCeEEEEeCCCcc
Q 025203          160 KNRGVKIFLVSSRRES  175 (256)
Q Consensus       160 ~~~G~~i~ivTnR~~~  175 (256)
                      -++|++|+|||.-...
T Consensus       179 L~~gv~VgIVTAAGY~  194 (408)
T PF06437_consen  179 LRRGVKVGIVTAAGYP  194 (408)
T ss_pred             HhcCCeEEEEeCCCCC
Confidence            6789999999987643

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=85.04  E-value=0.55  Score=39.05  Aligned_cols=23  Identities=22%  Similarity=0.290  Sum_probs=18.0

Q ss_pred             HHHHHHHHhcCCcEEEEEcCCcc
Q 025203          212 AQVRKRLVKEGYRIWGVVGDQWS  234 (256)
Q Consensus       212 ~~~r~~l~~~g~~i~~~iGD~~s  234 (256)
                      .+..+.|++.|+++.+.-||+..
T Consensus       133 ~~~l~~L~~~Gi~~~i~TGD~~~  155 (215)
T PF00702_consen  133 KEALQELKEAGIKVAILTGDNES  155 (215)
T ss_dssp             HHHHHHHHHTTEEEEEEESSEHH
T ss_pred             hhhhhhhhccCcceeeeeccccc
Confidence            45667788889999999999754

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=82.63  E-value=5.1  Score=42.58  Aligned_cols=30  Identities=13%  Similarity=0.309  Sum_probs=27.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      +.++-|++.+.++.|++.|+++.++||-..
T Consensus       629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~  658 (1057)
T TIGR01652       629 EDKLQEGVPETIELLRQAGIKIWVLTGDKV  658 (1057)
T ss_pred             hhhhhhccHHHHHHHHHCCCeEEEEcCCcH
Confidence            468889999999999999999999999653

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=82.63  E-value=9.4  Score=31.54  Aligned_cols=104  Identities=18%  Similarity=0.144  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHc-C-CeEEEEeCCCcc----c
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNR-G-VKIFLVSSRRES----L  176 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~-G-~~i~ivTnR~~~----~  176 (256)
                      +.+|+|||=|.++.--             ++.+-|            |.-+.=+++++.. | ..++++||....    .
T Consensus        42 ~ikavVlDKDNcit~P-------------~~~~Iw------------p~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~   96 (190)
T KOG2961|consen   42 GIKAVVLDKDNCITAP-------------YSLAIW------------PPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDH   96 (190)
T ss_pred             CceEEEEcCCCeeeCC-------------cccccC------------chhHHHHHHHHHHhCcccEEEEecCcCccccCC
Confidence            6789999999998652             222222            3333334445543 3 568888886432    1


Q ss_pred             HHHHHHHHH-hcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHh----cCCcEEEEEcCCc-cccCCCC
Q 025203          177 RSYTVDNLI-HVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVK----EGYRIWGVVGDQW-SSFEGLP  240 (256)
Q Consensus       177 r~~T~~~L~-~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~----~g~~i~~~iGD~~-sDl~ga~  240 (256)
                      -..-.+.|+ +.|++     ++|-..  .||.-.  .++...+-.    ..-..+++|||++ +||.-|+
T Consensus        97 d~s~Ak~le~k~gIp-----VlRHs~--kKP~ct--~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN  157 (190)
T KOG2961|consen   97 DDSKAKALEAKIGIP-----VLRHSV--KKPACT--AEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYAN  157 (190)
T ss_pred             chHHHHHHHHhhCCc-----eEeecc--cCCCcc--HHHHHHHhCCcccCChhHeEEEccchhhhHhhhh
Confidence            112344554 46887     344322  222210  111121111    1123588999997 8998764

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=82.52  E-value=1.6  Score=39.90  Aligned_cols=25  Identities=20%  Similarity=0.046  Sum_probs=20.0

Q ss_pred             cEEEEEcCCc-cccCCCC-CCCcEEEe
Q 025203          224 RIWGVVGDQW-SSFEGLP-KPKRTFKL  248 (256)
Q Consensus       224 ~i~~~iGD~~-sDl~ga~-~g~r~fkl  248 (256)
                      +.+++|||++ +|+.+|. +|.+++.+
T Consensus       264 ~~~~mIGD~~~tDI~ga~~~G~~silV  290 (321)
T TIGR01456       264 HALYMVGDNPASDIIGAQNYGWFSCLV  290 (321)
T ss_pred             heEEEEcCChhhhhhhHHhCCceEEEe
Confidence            4699999998 9999984 67776654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=82.33  E-value=5.7  Score=38.28  Aligned_cols=103  Identities=18%  Similarity=0.173  Sum_probs=64.2

Q ss_pred             HHHHHHHHHh----cCC--cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce-EEEecCCCCCch
Q 025203          134 ASSWEAWMKE----SKA--PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS-LELRGLEDEYKK  206 (256)
Q Consensus       134 ~~~~~~wv~~----~~~--~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~-lilr~~~~~~kp  206 (256)
                      +.+|.+.+..    ++.  -|.....++++++.+.|.+|+++|.---. -+...+.|...|++...- ++++++.--.|.
T Consensus        80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlp-s~Il~~~L~s~g~d~~nipiY~S~e~rl~Kn  158 (635)
T COG5610          80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLP-SSILRTFLNSFGPDFNNIPIYMSSEFRLKKN  158 (635)
T ss_pred             cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCc-HHHHHHHHHhcCCCccCceeeecceeehhcc
Confidence            3456666542    233  34556789999999999999999986432 245677888999987653 667665422221


Q ss_pred             -hhhhhHHHHHHHHhcCCcEEEEEcCCc-cccCCC
Q 025203          207 -VQQYKAQVRKRLVKEGYRIWGVVGDQW-SSFEGL  239 (256)
Q Consensus       207 -~~~~K~~~r~~l~~~g~~i~~~iGD~~-sDl~ga  239 (256)
                       ...+| .+. .++.-...-|+-+||+| .|...+
T Consensus       159 Sg~LFk-~Vl-k~EnVd~~~w~H~GDN~~aD~l~p  191 (635)
T COG5610         159 SGNLFK-AVL-KLENVDPKKWIHCGDNWVADYLKP  191 (635)
T ss_pred             cchHHH-HHH-hhcCCChhheEEecCchhhhhcCc
Confidence             11222 221 12222344599999997 576654

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate

Probab=80.85  E-value=3  Score=38.02  Aligned_cols=25  Identities=4%  Similarity=0.149  Sum_probs=21.1

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeC
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSS  171 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTn  171 (256)
                      ..+|...+++++|+++|+++++...
T Consensus        63 ~~FPdp~~mi~~L~~~G~kv~~~i~   87 (319)
T cd06591          63 ERFPDPKAMVRELHEMNAELMISIW   87 (319)
T ss_pred             hhCCCHHHHHHHHHHCCCEEEEEec
Confidence            3568889999999999999987654

XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	256
2i33_A	258	The Structure Of The Class C Acid Phosphatase From		9e-08
3ocy_A	262	Structure Of Recombinant Haemophilus Influenzae E(P		4e-05
3pct_A	260	Structure Of The Class C Acid Phosphatase From Past		7e-05
3sf0_A	262	Structure Of Recombinant Haemophilus Influenzae E(P		1e-04
3ocu_A	262	Structure Of Recombinant Haemophilus Influenzae E(P		1e-04
3et4_A	255	Structure Of Recombinant Haemophilus Influenzae E(P		2e-04

>pdb|2I33|A Chain A, The Structure Of The Class C Acid Phosphatase From Bacillus Anthracis Length = 258

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 72  YMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFK---KHGFG 128
           Y T+ + KA   +     +L L    +   + K A + D+D+T+L   P+     K G G
Sbjct: 27  YQTAGEMKALYYQGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKG 86
Query: 129 GERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVG 188
                   W+ W+ +++A AL  +++     +++GV I+ +S+R+ +    T+ NL  VG
Sbjct: 87  ----YPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVG 142
Query: 189 YHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL 239
               A+ E   L+D  +K +    + R+ LV + + I    GD  S F G 
Sbjct: 143 -APQATKEHILLQDPKEKGK----EKRRELVSQTHDIVLFFGDNLSDFTGF 188

>pdb|3OCY|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Complexed With Inorganic Phosphate Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
           D+D+T+L   PY        +  +   W  W+   ++ A+   +   + + +   K+F V
Sbjct: 64  DLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 123
Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
           ++R++S  +S T+D++  +G++G             KK +  KA     + K+GY I   
Sbjct: 124 TNRKDSTEKSGTIDDMKRLGFNGVEESAFY-----LKKDKSAKAARFAEIEKQGYEIVLY 178
Query: 229 VGDQWSSF 236
           VGD    F
Sbjct: 179 VGDNLDDF 186

>pdb|3PCT|A Chain A, Structure Of The Class C Acid Phosphatase From Pasteurella Multocida Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
           D+D+T++    Y       G+  +  +W  W+   ++ A+   +   + +   G  +F V
Sbjct: 64  DLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFV 123
Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
           S+RR+ + ++ TVD++  +G+ G     L   +D+  K  ++     K++   GY I   
Sbjct: 124 SNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRF-----KQVEDMGYDIVLF 178
Query: 229 VGDQWSSF 236
           VGD  + F
Sbjct: 179 VGDNLNDF 186

>pdb|3SF0|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Mutant D64n Complexed With 5'amp Length = 262

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
           ++D+T+L   PY        +  +   W  W+   ++ A+   +   + + +   K+F V
Sbjct: 64  NLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 123
Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
           ++R++S  +S T+D++  +G++G             KK +  KA     + K+GY I   
Sbjct: 124 TNRKDSTEKSGTIDDMKRLGFNGVEESAFY-----LKKDKSAKAARFAEIEKQGYEIVLY 178
Query: 229 VGDQWSSF 236
           VGD    F
Sbjct: 179 VGDNLDDF 186

>pdb|3OCU|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Mutant D66n Complexed With Nmn Length = 262

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
           D+++T+L   PY        +  +   W  W+   ++ A+   +   + + +   K+F V
Sbjct: 64  DLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYV 123
Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
           ++R++S  +S T+D++  +G++G             KK +  KA     + K+GY I   
Sbjct: 124 TNRKDSTEKSGTIDDMKRLGFNGVEESAFY-----LKKDKSAKAARFAEIEKQGYEIVLY 178
Query: 229 VGDQWSSF 236
           VGD    F
Sbjct: 179 VGDNLDDF 186

>pdb|3ET4|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid Phosphatase Length = 255

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 110 DVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLV 169
           D+D+T+L   PY        +  +   W  W+   ++ A+   +   + + +   K+F V
Sbjct: 65  DLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYV 124
Query: 170 SSRRESL-RSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGV 228
           ++R++S  ++ T+D++  +G++G             KK +  KA     + K+GY I   
Sbjct: 125 TNRKDSSEKAGTIDDMKRLGFNGVEESAFY-----LKKDKSAKAARFAEIEKQGYEIVLY 179
Query: 229 VGDQWSSF 236
           VGD    F
Sbjct: 180 VGDNLDDF 187

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	256
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	2e-40
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	3e-40
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	2e-37
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	7e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A Length = 258

 Score =  139 bits (350), Expect = 2e-40
 Identities = 42/200 (21%), Positives = 81/200 (40%), Gaps = 23/200 (11%)

Query: 72  YMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGER 131
           Y T+ + KA   +     +L L    +   + K A + D+D+T+L   P+       G+ 
Sbjct: 27  YQTAGEMKALYYQGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKG 86

Query: 132 LNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG 191
                W+ W+ +++A AL  +++     +++GV I+ +S+R+ +    T+ NL  VG   
Sbjct: 87  -YPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQ 145

Query: 192 WASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKP--------- 242
                +   + +     +   + R+ LV + + I    GD  S F G             
Sbjct: 146 ATKEHILLQDPK-----EKGKEKRRELVSQTHDIVLFFGDNLSDFTGFDGKSVKDRNQAV 200

Query: 243 --------KRTFKLPNSMYY 254
                   ++    PN MY 
Sbjct: 201 TDSKAQFGEKFIIFPNPMYG 220

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} Length = 260

 Score =  138 bits (349), Expect = 3e-40
 Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 25/212 (11%)

Query: 61  VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIP 120
           + Q+    +     S +Y A + +A    K+            K A + D+D+T++    
Sbjct: 16  LQQQVAMGLIWTQQSGEYAALAHQAFNSAKMAFDHA-KAKKGKKKAVVVDLDETMIDNSA 74

Query: 121 YFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-RSY 179
           Y       G+  +  +W  W+   ++ A+   +   + +   G  +F VS+RR+ + ++ 
Sbjct: 75  YAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAG 134

Query: 180 TVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL 239
           TVD++  +G+ G     L   +D+  K  +      K++   GY I   VGD  + F   
Sbjct: 135 TVDDMKRLGFTGVNDKTLLLKKDKSNKSVR-----FKQVEDMGYDIVLFVGDNLNDFGDA 189

Query: 240 PKPK------------------RTFKLPNSMY 253
              K                  +   LPN+ Y
Sbjct: 190 TYKKSNAERRDFVAKNSKAFGKKFIVLPNTQY 221

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A Length = 262

 Score =  131 bits (330), Expect = 2e-37
 Identities = 43/201 (21%), Positives = 79/201 (39%), Gaps = 25/201 (12%)

Query: 72  YMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGER 131
              S +YKA + +A    K+        A   K A + D+++T+L   PY        + 
Sbjct: 27  MQDSGEYKALAYQAYNAAKVAFDHAKV-AKGKKKAVVADLNETMLDNSPYAGWQVQNNKP 85

Query: 132 LNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-RSYTVDNLIHVGYH 190
            +   W  W+   ++ A+   +   + + +   K+F V++R++S  +S T+D++  +G++
Sbjct: 86  FDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145

Query: 191 GWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPK------- 243
           G         +D     +  KA     + K+GY I   VGD    F      K       
Sbjct: 146 GVEESAFYLKKD-----KSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRA 200

Query: 244 -----------RTFKLPNSMY 253
                          LPN+ Y
Sbjct: 201 FVDQNQGKFGKTFIMLPNANY 221

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A Length = 211

 Score = 72.9 bits (178), Expect = 7e-16
 Identities = 33/195 (16%), Positives = 55/195 (28%), Gaps = 21/195 (10%)

Query: 73  MTSSQYKADSQRAAEEVKLYLSGCC-SLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGER 131
           +      A     A    + ++    SLAG    A  FD+DDT+L + P F +       
Sbjct: 5   LNPGTNVARLAEQAPIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSP 64

Query: 132 LNAS--------SWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN 183
            +                 +  +   E    L      RG  IF V+ R  +        
Sbjct: 65  ESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT 124

Query: 184 LI-HVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSF----EG 238
           L  +          +    D+  +         K    +   I    GD  +      + 
Sbjct: 125 LADNFHIPATNMNPVIFAGDKPGQ-------NTKSQWLQDKNIRIFYGDSDNDITAARDV 177

Query: 239 LPKPKRTFKLPNSMY 253
             +  R  +  NS Y
Sbjct: 178 GARGIRILRASNSTY 192

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 59/229 (25%)

Query: 32  RHAVKDSLKTYCESWRINVELNNIREF--EVVPQECIDHIKKYMTSSQYKADSQRAAEEV 89
           ++  KD L  + +++  N +  ++++    ++ +E IDHI              + A   
Sbjct: 15  QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM-----------SKDAVSG 63

Query: 90  KLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPAL 149
            L L     L    ++     V++ L     +                     E + P++
Sbjct: 64  TLRLFWT--LLSKQEEMVQKFVEEVLRINYKFL--------------MSPIKTEQRQPSM 107

Query: 150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQ 209
                             +   +R+ L +   DN +   Y+       R     Y K++Q
Sbjct: 108 MTR---------------MYIEQRDRLYN---DNQVFAKYNVS-----R--LQPYLKLRQ 142

Query: 210 --YKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFKLPNSMYYLS 256
              + +  K ++ +G  + G  G  W + +     K   K+   +++L+
Sbjct: 143 ALLELRPAKNVLIDG--VLG-SGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	256
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	100.0
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	100.0
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	100.0
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.63
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.6
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.59
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.56
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.56
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.53
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.53
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.51
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.5
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.5
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.49
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.49
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.49
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.48
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.48
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.47
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.47
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.47
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.47
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.46
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.46
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.46
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.46
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.46
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.46
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.45
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.45
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.44
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.44
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.44
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.44
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.44
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.43
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.43
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.42
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.41
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.41
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.41
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.41
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.4
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.39
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.39
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.39
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.39
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.38
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.38
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.38
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.37
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.37
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.37
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.36
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.36
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.36
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.36
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.35
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.35
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.34
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.33
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.33
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.33
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.33
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.33
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.33
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.32
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.32
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.32
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.32
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.31
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.3
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.3
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.3
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.29
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.28
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.28
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.26
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.26
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.25
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.25
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.22
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.21
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.21
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.2
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.19
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.19
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.18
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.18
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.18
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.17
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.13
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.12
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.11
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.09
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.09
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.09
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.08
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.02
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.97
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.97
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	98.96
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	98.9
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.88
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.87
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.85
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.78
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.76
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	98.74
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.74
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.72
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.69
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.69
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.68
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.64
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.62
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.05
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.52
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.5
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.5
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.48
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.45
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.43
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	98.41
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.4
4gxt_A	385	A conserved functionally unknown protein; structur	98.4
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.39
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	98.38
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.36
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.33
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.31
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	98.3
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.28
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	98.18
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	98.17
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.15
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	98.14
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.12
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	98.12
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	98.1
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	98.09
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.08
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	98.0
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	97.97
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	97.88
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	97.86
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.79
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	97.67
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	97.36
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	97.27
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	97.19
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.1
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.09
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	96.96
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	96.95
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	96.91
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	96.84
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	96.7
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	96.64
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	96.57
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	96.47
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	96.39
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	95.92
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	95.87
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	95.09
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	94.71
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	94.38
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	93.31
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	93.06
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	92.66
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	90.2
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	88.66
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	88.61
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	86.5
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	84.94
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	84.81
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	80.85

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=100.00  E-value=5.2e-44  Score=314.88  Aligned_cols=186  Identities=24%  Similarity=0.377  Sum_probs=172.2

Q ss_pred             cchhhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHH
Q 025203           61 VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAW  140 (256)
Q Consensus        61 vP~~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~w  140 (256)
                      +-++-+..+.||++|+||++++.|+++.|+.|+++. ...++++++|||||||||+||.+|+..+++++.+|+++.|++|
T Consensus        16 ~~~~~~~a~~w~q~S~Ey~al~~q~yn~A~~~ld~~-~~~~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~w   94 (262)
T 3ocu_A           16 LQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHA-KVAKGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRW   94 (262)
T ss_dssp             HHHTTHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC-CCCTTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHH
Confidence            345667789999999999999999999999999998 6667789999999999999999999999998899999999999


Q ss_pred             HHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc-cHHHHHHHHHhcCCCCcc--eEEEecCCCCCchhhhhhHHHHHH
Q 025203          141 MKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES-LRSYTVDNLIHVGYHGWA--SLELRGLEDEYKKVQQYKAQVRKR  217 (256)
Q Consensus       141 v~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~-~r~~T~~~L~~~G~~~~~--~lilr~~~~~~kp~~~~K~~~r~~  217 (256)
                      +..+.++++||++++++.|+++|++|+|||||++. .|+.|.++|+++||+.|+  ++++++..       .+|+.+|+.
T Consensus        95 v~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-------~~K~~~r~~  167 (262)
T 3ocu_A           95 VDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK-------SAKAARFAE  167 (262)
T ss_dssp             HHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC-------SCCHHHHHH
T ss_pred             HHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC-------CChHHHHHH
Confidence            99999999999999999999999999999999998 899999999999999887  89998652       356889999


Q ss_pred             HHhcCCcEEEEEcCCccccCCCC------------------CCCcEEEecCCCCC
Q 025203          218 LVKEGYRIWGVVGDQWSSFEGLP------------------KPKRTFKLPNSMYY  254 (256)
Q Consensus       218 l~~~g~~i~~~iGD~~sDl~ga~------------------~g~r~fklPnp~Y~  254 (256)
                      +++.||+|+++|||+++||.+++                  +|.++|+||||||+
T Consensus       168 l~~~Gy~iv~~vGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~YG  222 (262)
T 3ocu_A          168 IEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYG  222 (262)
T ss_dssp             HHHTTEEEEEEEESSGGGGCSTTTTCCHHHHHHHHHHTGGGBTTTEEECCCSSCS
T ss_pred             HHhcCCCEEEEECCChHHhccccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCcc
Confidence            99899999999999999999965                  79999999999997

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=100.00  E-value=1.7e-43  Score=311.27  Aligned_cols=185  Identities=24%  Similarity=0.383  Sum_probs=166.3

Q ss_pred             chhhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHH
Q 025203           62 PQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWM  141 (256)
Q Consensus        62 P~~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv  141 (256)
                      -++-...+.||++||||++|+.|+++.|+.|+++++..+++ +++|||||||||+||++|+..+++++.+|+++.|++|+
T Consensus        17 ~~~~~~a~~w~q~S~ey~a~~~q~~~~A~~~l~~~~~~~g~-~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv   95 (260)
T 3pct_A           17 QQQVAMGLIWTQQSGEYAALAHQAFNSAKMAFDHAKAKKGK-KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWV   95 (260)
T ss_dssp             HHTTHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC------CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHH
Confidence            34556789999999999999999999999999998454444 46999999999999999999999888999999999999


Q ss_pred             HhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc-cHHHHHHHHHhcCCCCcc--eEEEecCCCCCchhhhhhHHHHHHH
Q 025203          142 KESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES-LRSYTVDNLIHVGYHGWA--SLELRGLEDEYKKVQQYKAQVRKRL  218 (256)
Q Consensus       142 ~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~-~r~~T~~~L~~~G~~~~~--~lilr~~~~~~kp~~~~K~~~r~~l  218 (256)
                      ..+.++++||++++++.|+++|++|+|||||++. .|+.|.++|+++||+.++  ++++++..       .+|+.+|++|
T Consensus        96 ~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-------~~K~~~r~~L  168 (260)
T 3pct_A           96 DARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-------SNKSVRFKQV  168 (260)
T ss_dssp             HTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC-------SSSHHHHHHH
T ss_pred             HcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC-------CChHHHHHHH
Confidence            9999999999999999999999999999999998 899999999999999886  79998742       3578899999


Q ss_pred             HhcCCcEEEEEcCCccccCCCC------------------CCCcEEEecCCCCC
Q 025203          219 VKEGYRIWGVVGDQWSSFEGLP------------------KPKRTFKLPNSMYY  254 (256)
Q Consensus       219 ~~~g~~i~~~iGD~~sDl~ga~------------------~g~r~fklPnp~Y~  254 (256)
                      ++.||+|+++|||+++||.++.                  +|.++|+||||||+
T Consensus       169 ~~~gy~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~YG  222 (260)
T 3pct_A          169 EDMGYDIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQYG  222 (260)
T ss_dssp             HTTTCEEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCSCS
T ss_pred             HhcCCCEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCcc
Confidence            8889999999999999999853                  79999999999997

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=100.00  E-value=8.4e-36  Score=262.72  Aligned_cols=187  Identities=24%  Similarity=0.340  Sum_probs=163.3

Q ss_pred             cchhhHHHHHhhhchhhhHHHHHHHHHHHHHHHhcccccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHH
Q 025203           61 VPQECIDHIKKYMTSSQYKADSQRAAEEVKLYLSGCCSLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAW  140 (256)
Q Consensus        61 vP~~c~~~v~~y~~~~~Y~~d~~~~~~~a~~y~~~~~~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~w  140 (256)
                      +.++-...+.||++|+||++|+.|+++.|+.++++.++..++++++|||||||||+++.+++..+..++..| .+.|++|
T Consensus        16 ~~~~~~~~~~~~~~s~ey~a~~~q~y~~a~~~~~~~~~~~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~-~~~~~~~   94 (258)
T 2i33_A           16 LTDQQLMADLWYQTAGEMKALYYQGYNTGQLKLDAALAKGTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGY-PYKWDDW   94 (258)
T ss_dssp             GGGGGHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEECSBTTTEECHHHHHHHHHHSCCT-TTTHHHH
T ss_pred             HhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCcccCcCCHHHHHHHHhcccch-HHHHHHH
Confidence            455667889999999999999999999999999987455577899999999999999999998887777788 7889999


Q ss_pred             HHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCC--CcceEEEecCCCCCchhhhhhHHHHHHH
Q 025203          141 MKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYH--GWASLELRGLEDEYKKVQQYKAQVRKRL  218 (256)
Q Consensus       141 v~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~--~~~~lilr~~~~~~kp~~~~K~~~r~~l  218 (256)
                      +.....+++||+.++|+.|+++|++++|+|||+...+..+.++|+.+|++  .++.++++++.. .||+      .+..+
T Consensus        95 ~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-~K~~------~~~~~  167 (258)
T 2i33_A           95 INKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-KGKE------KRREL  167 (258)
T ss_dssp             HHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC-CSSH------HHHHH
T ss_pred             HHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC-CCcH------HHHHH
Confidence            99999999999999999999999999999999988888899999999998  678888887642 2332      23335


Q ss_pred             HhcCCcEEEEEcCCccccCCCC-----------------CCCcEEEecCCCCCC
Q 025203          219 VKEGYRIWGVVGDQWSSFEGLP-----------------KPKRTFKLPNSMYYL  255 (256)
Q Consensus       219 ~~~g~~i~~~iGD~~sDl~ga~-----------------~g~r~fklPnp~Y~~  255 (256)
                      .+.|++++++|||+++|+.++.                 +|+++|+||||||+.
T Consensus       168 ~~~~~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~  221 (258)
T 2i33_A          168 VSQTHDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGD  221 (258)
T ss_dssp             HHHHEEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSH
T ss_pred             HHhCCCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcch
Confidence            5568889999999999999984                 699999999999973

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.63  E-value=1.1e-15  Score=127.56  Aligned_cols=100  Identities=12%  Similarity=0.041  Sum_probs=77.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||.+..   .+...++..|+..++..++.++. ...||++...   ...+++.|.
T Consensus        82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~---~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~---~~a~~~lg~  155 (216)
T 3kbb_A           82 LLKENPGVREALEFVKSKRIKLALATSTPQR---EALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIY---LLVLERLNV  155 (216)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHH---HHHHHHHTC
T ss_pred             hcccCccHHHHHHHHHHcCCCcccccCCcHH---HHHHHHHhcCCCccccccccccccCCCcccHHHH---HHHHHhhCC
Confidence            4678999999999999999999999998754   36788889999988776666543 5678887543   334444454


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEE-EecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTF-KLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~f-klPn  250 (256)
                        +.+++|||+.+|+.+|. +|.+++ .+++
T Consensus       156 ~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~  186 (216)
T 3kbb_A          156 VPEKVVVFEDSKSGVEAAKSAGIERIYGVVH  186 (216)
T ss_dssp             CGGGEEEEECSHHHHHHHHHTTCCCEEEECC
T ss_pred             CccceEEEecCHHHHHHHHHcCCcEEEEecC
Confidence              45999999999999884 898886 3544

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.60  E-value=1.8e-15  Score=125.48  Aligned_cols=134  Identities=15%  Similarity=0.068  Sum_probs=98.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||++....         .|.......   ....+++||+.++|+.|+++|++++++||++...+......
T Consensus         3 ik~vifD~DgtL~~~~~~---------~y~~~~~~~---~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~   70 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNT---------RYDHHPLDT---YPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRV   70 (189)
T ss_dssp             CCEEEECTBTTTBCCCTT---------SSCSSCGGG---CTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH
T ss_pred             ceEEEEcCCCceeeccch---------hhhhHHHhc---cCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHH
Confidence            579999999999884321         011100111   13478999999999999999999999999987666778899


Q ss_pred             HHhcCCCCcceEEEecCC-----CCCchhhhhhHHHHHHHHhcCC--cEEEEEcCC-ccccCCCC-CCCcEEEecCCC
Q 025203          184 LIHVGYHGWASLELRGLE-----DEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQ-WSSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       184 L~~~G~~~~~~lilr~~~-----~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~-~sDl~ga~-~g~r~fklPnp~  252 (256)
                      |++.|+..++..++..++     ...||++....   ..+++.|.  ..+++|||+ .+|+.+|. +|.+++.+.++-
T Consensus        71 l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~---~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A           71 LTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFD---FTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             HHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHH---HHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTT
T ss_pred             HHhcCchhheEEEEEccccccccCCCCcCHHHHH---HHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcc
Confidence            999999888766666554     35677774433   33333444  469999999 59999884 799999987654

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.59  E-value=3.6e-15  Score=128.52  Aligned_cols=100  Identities=13%  Similarity=0.065  Sum_probs=77.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++|++..     +...|++.|+..++..++.+++ ...||++....   ..+++.|.
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~-----~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~---~a~~~lg~  185 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSASKN-----AINVLNHLGISDKFDFIADAGKCKNNKPHPEIFL---MSAKGLNV  185 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHH---HHHHHHTC
T ss_pred             ccccchhHHHHHHHHHhcccccccccccch-----hhhHhhhcccccccceeecccccCCCCCcHHHHH---HHHHHhCC
Confidence            346789999999999999999999888743     3567889999988777766654 56788885443   34444454


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecCCC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPnp~  252 (256)
                        ..+++|||+.+|+++|. +|.+++.++++-
T Consensus       186 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~  217 (250)
T 4gib_A          186 NPQNCIGIEDASAGIDAINSANMFSVGVGNYE  217 (250)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEESCTT
T ss_pred             ChHHeEEECCCHHHHHHHHHcCCEEEEECChh
Confidence              45999999999999984 899999998763

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.56  E-value=7.9e-15  Score=125.96  Aligned_cols=98  Identities=9%  Similarity=0.068  Sum_probs=77.3

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC-
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      .+++||+.++++.|+++|++++++||+..     ....|++.|+..++..++.+++ ...||++...   ...+++.|. 
T Consensus        94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~-----~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~---~~a~~~lg~~  165 (243)
T 4g9b_A           94 NAVLPGIRSLLADLRAQQISVGLASVSLN-----APTILAALELREFFTFCADASQLKNSKPDPEIF---LAACAGLGVP  165 (243)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCCTT-----HHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHH---HHHHHHHTSC
T ss_pred             ccccccHHHHHHhhhcccccceecccccc-----hhhhhhhhhhccccccccccccccCCCCcHHHH---HHHHHHcCCC
Confidence            46899999999999999999999999753     2456888999888776666654 5678888543   344444554 


Q ss_pred             -cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          224 -RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       224 -~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                       +.|++|||+.+|+.+|. +|.+++.+++.
T Consensus       166 p~e~l~VgDs~~di~aA~~aG~~~I~V~~g  195 (243)
T 4g9b_A          166 PQACIGIEDAQAGIDAINASGMRSVGIGAG  195 (243)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             hHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence             45999999999999984 89999999865

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.56  E-value=3.6e-15  Score=124.79  Aligned_cols=98  Identities=11%  Similarity=0.152  Sum_probs=76.7

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..+++||+.++++.|++ |++++++||.+...   ....|+++|+..++..++..+ ...||++..   .++.++..|..
T Consensus        82 ~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~---~~~~l~~~gl~~~f~~i~~~~-~~~Kp~p~~---~~~~~~~lg~~  153 (210)
T 2ah5_A           82 EAQLFPQIIDLLEELSS-SYPLYITTTKDTST---AQDMAKNLEIHHFFDGIYGSS-PEAPHKADV---IHQALQTHQLA  153 (210)
T ss_dssp             SCEECTTHHHHHHHHHT-TSCEEEEEEEEHHH---HHHHHHHTTCGGGCSEEEEEC-SSCCSHHHH---HHHHHHHTTCC
T ss_pred             CCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHHhcCchhheeeeecCC-CCCCCChHH---HHHHHHHcCCC
Confidence            36789999999999999 99999999987543   567788999988876666655 566777733   34555666654


Q ss_pred             --EEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          225 --IWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       225 --i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        .+++|||+.+|+.++ .+|.+++-++.
T Consensus       154 p~~~~~vgDs~~Di~~a~~aG~~~i~v~~  182 (210)
T 2ah5_A          154 PEQAIIIGDTKFDMLGARETGIQKLAITW  182 (210)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred             cccEEEECCCHHHHHHHHHCCCcEEEEcC
Confidence              599999999999988 47899887764

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.53  E-value=9.1e-15  Score=119.34  Aligned_cols=126  Identities=13%  Similarity=0.051  Sum_probs=86.6

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc-------
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-------  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~-------  176 (256)
                      .++++||+||||+++...|..+                 ....+++||+.++|++|+++|++++++||++...       
T Consensus         1 ~k~v~~D~DGtL~~~~~~~~~~-----------------~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~   63 (179)
T 3l8h_A            1 MKLIILDRDGVVNQDSDAFVKS-----------------PDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTA   63 (179)
T ss_dssp             CCEEEECSBTTTBCCCTTCCCS-----------------GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHH
T ss_pred             CCEEEEcCCCccccCCCccCCC-----------------HHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHH
Confidence            3689999999999875322110                 1246789999999999999999999999998510       


Q ss_pred             -----HHHHHHHHHhcCCCCcceEEEe-----cCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-CCCC
Q 025203          177 -----RSYTVDNLIHVGYHGWASLELR-----GLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPK  243 (256)
Q Consensus       177 -----r~~T~~~L~~~G~~~~~~lilr-----~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~  243 (256)
                           .......|++.|.. ++.++..     ......||++...   .+.+++.|.  +.+++|||+.+|+.++ .+|.
T Consensus        64 ~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~KP~~~~~---~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~  139 (179)
T 3l8h_A           64 TLNAIHDKMHRALAQMGGV-VDAIFMCPHGPDDGCACRKPLPGMY---RDIARRYDVDLAGVPAVGDSLRDLQAAAQAGC  139 (179)
T ss_dssp             HHHHHHHHHHHHHHHTTCC-CCEEEEECCCTTSCCSSSTTSSHHH---HHHHHHHTCCCTTCEEEESSHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhCCCc-eeEEEEcCCCCCCCCCCCCCCHHHH---HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence                 13356677888821 2333321     2224567776433   344444454  4589999999999987 4788


Q ss_pred             cEEEecC
Q 025203          244 RTFKLPN  250 (256)
Q Consensus       244 r~fklPn  250 (256)
                      +++.+..
T Consensus       140 ~~i~v~~  146 (179)
T 3l8h_A          140 APWLVQT  146 (179)
T ss_dssp             EEEEEST
T ss_pred             cEEEECC
Confidence            8888754

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.53  E-value=1e-14  Score=120.82  Aligned_cols=142  Identities=17%  Similarity=0.153  Sum_probs=99.8

Q ss_pred             CcEEEEecCCCccCChHHHHHh--ccCCCCC----------C---HHHHHHHHH------hcCCcchHHHHHHHHHHHHc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH--GFGGERL----------N---ASSWEAWMK------ESKAPALEHTLNLFHEIKNR  162 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~--~~g~~~~----------~---~~~~~~wv~------~~~~~~~pg~~ell~~L~~~  162 (256)
                      .++|+||+||||+++.+.+...  .+|....          .   .....+|..      .....++|++.++++.|+++
T Consensus         6 ~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~   85 (205)
T 3m9l_A            6 IKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAGR   85 (205)
T ss_dssp             CCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHhc
Confidence            5799999999999975444321  1232111          1   111222222      13467899999999999999


Q ss_pred             CCeEEEEeCCCcccHHHHHHHHHhcCCCCcc--eEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCC
Q 025203          163 GVKIFLVSSRRESLRSYTVDNLIHVGYHGWA--SLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEG  238 (256)
Q Consensus       163 G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~g  238 (256)
                      |++++++||.+..   .+...|+..|+..++  ..++..+....||.+..   .+..++..|.  +.+++|||+.+|+.+
T Consensus        86 g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~---~~~~~~~~g~~~~~~i~iGD~~~Di~~  159 (205)
T 3m9l_A           86 GYRLGILTRNARE---LAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGG---LLKLAEAWDVSPSRMVMVGDYRFDLDC  159 (205)
T ss_dssp             TCEEEEECSSCHH---HHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHH---HHHHHHHTTCCGGGEEEEESSHHHHHH
T ss_pred             CCeEEEEeCCchH---HHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHH---HHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence            9999999998754   367788889998776  66666665666776533   3445555565  459999999999998


Q ss_pred             CC-CCCcEEEecCC
Q 025203          239 LP-KPKRTFKLPNS  251 (256)
Q Consensus       239 a~-~g~r~fklPnp  251 (256)
                      +. +|.+++.+.|.
T Consensus       160 a~~aG~~~i~v~~~  173 (205)
T 3m9l_A          160 GRAAGTRTVLVNLP  173 (205)
T ss_dssp             HHHHTCEEEECSSS
T ss_pred             HHHcCCEEEEEeCC
Confidence            74 78888888764

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.51  E-value=5.4e-14  Score=119.10  Aligned_cols=100  Identities=12%  Similarity=0.030  Sum_probs=74.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||++..   .....|+.+|+..++..++..+ ....||.+...   ...++..|.
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  176 (240)
T 2no4_A          103 ELSAYPDAAETLEKLKSAGYIVAILSNGNDE---MLQAALKASKLDRVLDSCLSADDLKIYKPDPRIY---QFACDRLGV  176 (240)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHH---HHHHHHHTC
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHH---HHHHHHcCC
Confidence            4678899999999999999999999999754   3577788899987765555543 34567766433   333444454


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                        ..+++|||+.+|+.++. +|.+++.++.
T Consensus       177 ~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~  206 (240)
T 2no4_A          177 NPNEVCFVSSNAWDLGGAGKFGFNTVRINR  206 (240)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred             CcccEEEEeCCHHHHHHHHHCCCEEEEECC
Confidence              45899999999999874 7888887754

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.50  E-value=1.3e-13  Score=116.26  Aligned_cols=100  Identities=18%  Similarity=0.195  Sum_probs=74.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc--eEEEecCC-CCCchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA--SLELRGLE-DEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--~lilr~~~-~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ...++||+.++++.|+++|++++++||.+...   ....|+. |+..++  ..+...+. ...||.+..   .+..++..
T Consensus       106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~---~~~~~~~l  178 (247)
T 3dv9_A          106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTS---LLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEP---YLMALKKG  178 (247)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECSCC------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHH---HHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHH---HHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHH---HHHHHHHc
Confidence            46889999999999999999999999987543   4566777 888776  65665543 556676633   33444445


Q ss_pred             CC--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          222 GY--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       222 g~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      |.  ..+++|||+.+|+.++ .+|.+++.+.+.
T Consensus       179 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~  211 (247)
T 3dv9_A          179 GFKPNEALVIENAPLGVQAGVAAGIFTIAVNTG  211 (247)
T ss_dssp             TCCGGGEEEEECSHHHHHHHHHTTSEEEEECCS
T ss_pred             CCChhheEEEeCCHHHHHHHHHCCCeEEEEcCC
Confidence            54  4599999999999987 479999988764

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.50  E-value=4e-14  Score=120.61  Aligned_cols=99  Identities=13%  Similarity=0.075  Sum_probs=74.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||.+..   .+...|++.|+. ++..+..++ ....||++..   ....++..|.
T Consensus       108 ~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~-~f~~~~~~~~~~~~Kp~p~~---~~~~~~~l~~  180 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKGVKLAVVSNKPNE---AVQVLVEELFPG-SFDFALGEKSGIRRKPAPDM---TSECVKVLGV  180 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHHSTT-TCSEEEEECTTSCCTTSSHH---HHHHHHHHTC
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHcCCc-ceeEEEecCCCCCCCCCHHH---HHHHHHHcCC
Confidence            4578999999999999999999999998653   357778888887 655555543 4566776643   2344444454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        +.+++|||+.+|+.++ .+|.+++.+++
T Consensus       181 ~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~  210 (240)
T 2hi0_A          181 PRDKCVYIGDSEIDIQTARNSEMDEIAVNW  210 (240)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred             CHHHeEEEcCCHHHHHHHHHCCCeEEEECC
Confidence              4599999999999987 47888887754

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.49  E-value=1e-13  Score=113.62  Aligned_cols=101  Identities=16%  Similarity=0.143  Sum_probs=76.9

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC-
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      ..++|++.++++.|+++|++++++||.+..   .....|++.|+..++..+...+ ....||.+...   ++.++..|. 
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~---~~~~~~~~~~  161 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKA---DIFRALEENRLQGFFDIVLSGEEFKESKPNPEIY---LTALKQLNVQ  161 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHH---HHHHHHHTCC
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHH---HHHHHHHHcCcHhheeeEeecccccCCCCChHHH---HHHHHHcCCC
Confidence            368999999999999999999999999753   3677888899987765555544 35567766433   344444454 


Q ss_pred             -cEEEEEcCCccccCCC-CCCCcEEEecCCC
Q 025203          224 -RIWGVVGDQWSSFEGL-PKPKRTFKLPNSM  252 (256)
Q Consensus       224 -~i~~~iGD~~sDl~ga-~~g~r~fklPnp~  252 (256)
                       +.+++|||+.+|+.++ .+|.+++.+.++.
T Consensus       162 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~  192 (214)
T 3e58_A          162 ASRALIIEDSEKGIAAGVAADVEVWAIRDNE  192 (214)
T ss_dssp             GGGEEEEECSHHHHHHHHHTTCEEEEECCSS
T ss_pred             hHHeEEEeccHhhHHHHHHCCCEEEEECCCC
Confidence             4599999999999987 4799999987653

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.49  E-value=1.3e-13  Score=116.95  Aligned_cols=100  Identities=16%  Similarity=0.152  Sum_probs=76.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc--eEEEecCC-CCCchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA--SLELRGLE-DEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--~lilr~~~-~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ...++|++.++++.|+++|++++++||.+...   ....|+. |+..++  ..++..+. ...||.+..   .+..++..
T Consensus       107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~---~~~~~~~l  179 (243)
T 3qxg_A          107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLS---LLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEP---YLMALKKG  179 (243)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHH---HHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHH---HHHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHH---HHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHH---HHHHHHHc
Confidence            46789999999999999999999999987543   4566777 888776  66666544 456676633   34455555


Q ss_pred             CC--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          222 GY--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       222 g~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      |.  +.+++|||+.+|+.++ .+|.+++.+.+.
T Consensus       180 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~  212 (243)
T 3qxg_A          180 GLKADEAVVIENAPLGVEAGHKAGIFTIAVNTG  212 (243)
T ss_dssp             TCCGGGEEEEECSHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCC
Confidence            65  4599999999999987 479999988764

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.48  E-value=8.9e-14  Score=116.81  Aligned_cols=100  Identities=15%  Similarity=0.052  Sum_probs=74.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++|++.++++.|+++|++++++||++..   .+...|+..|+..++..++..+ ....||.+...   .+.++..|.
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  166 (232)
T 1zrn_A           93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQ---SIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVY---ELAEQALGL  166 (232)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHH---HHHHHHHTS
T ss_pred             cCCCCccHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHhcChHhhhheEEEecccCCCCCCHHHH---HHHHHHcCC
Confidence            4578899999999999999999999998754   3677788899887765555544 35567766433   233344453


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                        ..+++|||+.+|+.++. +|.+++.++.
T Consensus       167 ~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~  196 (232)
T 1zrn_A          167 DRSAILFVASNAWDATGARYFGFPTCWINR  196 (232)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred             CcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence              45899999999999874 6888888754

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.48  E-value=4e-14  Score=109.57  Aligned_cols=114  Identities=16%  Similarity=0.040  Sum_probs=83.0

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++++||+||||.++                           .+++||+.+++++|+++|++++++||++...   ....
T Consensus         2 ~k~i~~D~DgtL~~~---------------------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~---~~~~   51 (137)
T 2pr7_A            2 MRGLIVDYAGVLDGT---------------------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGL---GAAP   51 (137)
T ss_dssp             CCEEEECSTTTTSSC---------------------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGG---GGHH
T ss_pred             CcEEEEeccceecCC---------------------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHH---HHHH
Confidence            579999999999543                           3467999999999999999999999998665   3555


Q ss_pred             HHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          184 LIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       184 L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      |+..|+..++..++.+ +....||.+...   +..+++.|.  +.+++|||+.+|+.++. +|.+++.+..
T Consensus        52 l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~---~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~  119 (137)
T 2pr7_A           52 IRELETNGVVDKVLLSGELGVEKPEEAAF---QAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQ  119 (137)
T ss_dssp             HHHHHHTTSSSEEEEHHHHSCCTTSHHHH---HHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSC
T ss_pred             HHHCChHhhccEEEEeccCCCCCCCHHHH---HHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCC
Confidence            6677776665444443 334567766433   334444554  35899999999998874 6888776643

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.47  E-value=1.8e-13  Score=114.90  Aligned_cols=102  Identities=11%  Similarity=0.078  Sum_probs=76.2

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++++.|+++|++++++||.+..   .+...|+..|+..++..++.. +....||.+...   ...++..|
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~---~~~~~~lg  173 (231)
T 3kzx_A          100 DNFMLNDGAIELLDTLKENNITMAIVSNKNGE---RLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPV---LAALTNIN  173 (231)
T ss_dssp             CCCEECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHH---HHHHHHHT
T ss_pred             ccceECcCHHHHHHHHHHCCCeEEEEECCCHH---HHHHHHHHCCchhheeeEEcccccCCCCCChHHH---HHHHHHcC
Confidence            35689999999999999999999999998643   367788899998766555544 445667766433   33344445


Q ss_pred             C--c-EEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y--R-IWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~-i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .  . .+++|||+.+|+.++ .+|.+++.+.+.
T Consensus       174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~  206 (231)
T 3kzx_A          174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGST  206 (231)
T ss_dssp             CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC-
T ss_pred             CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence            4  3 689999999999987 478888888554

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.47  E-value=1.1e-13  Score=116.47  Aligned_cols=100  Identities=11%  Similarity=0.009  Sum_probs=75.9

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++||+.++++.|+++|++++++||.+..   .....|+..|+..++..++..+. ...||.+..   .+..++..|
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~lg  174 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEK---AARAIAELTGLDTRLTVIAGDDSVERGKPHPDM---ALHVARGLG  174 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHH---HHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHH---HHHHHHHHT
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCchhheeeEEeCCCCCCCCCCHHH---HHHHHHHcC
Confidence            45678999999999999999999999998754   35677888898777666666554 456666533   334444445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEec
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      .  ..+++|||+.+|+.++ .+|.+++.+.
T Consensus       175 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~  204 (237)
T 4ex6_A          175 IPPERCVVIGDGVPDAEMGRAAGMTVIGVS  204 (237)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred             CCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence            4  4599999999999987 4788888775

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.47  E-value=5e-13  Score=112.16  Aligned_cols=142  Identities=17%  Similarity=0.102  Sum_probs=89.3

Q ss_pred             CcEEEEecCCCccCChHHHHHh-ccCCC----C-C--------C---------------HHHHHHHHHhcCCcchHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH-GFGGE----R-L--------N---------------ASSWEAWMKESKAPALEHTLN  154 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~-~~g~~----~-~--------~---------------~~~~~~wv~~~~~~~~pg~~e  154 (256)
                      .++|+||+||||+++.+..... .+|..    . +        +               .+.+.++......+++||+.+
T Consensus        14 ~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   93 (225)
T 1nnl_A           14 ADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRE   93 (225)
T ss_dssp             CSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCHHHHHHHHHHSCCCBCTTHHH
T ss_pred             CCEEEEeCcccccccccHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCHHHHHHHHHhccCCCCccHHH
Confidence            4799999999999997643221 12211    0 0        0               011223333345789999999


Q ss_pred             HHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC--cceEE---------EecCCCCCchhhhhhH-HHHHHHHhcC
Q 025203          155 LFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG--WASLE---------LRGLEDEYKKVQQYKA-QVRKRLVKEG  222 (256)
Q Consensus       155 ll~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~--~~~li---------lr~~~~~~kp~~~~K~-~~r~~l~~~g  222 (256)
                      +++.|+++|++++++||++..   .+...|+++|+..  ++..+         ...+.....+....|. ...+.++..|
T Consensus        94 ~l~~L~~~g~~~~i~T~~~~~---~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~  170 (225)
T 1nnl_A           94 LVSRLQERNVQVFLISGGFRS---IVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFH  170 (225)
T ss_dssp             HHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHCCCcEEEEeCChHH---HHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHHHHHHcC
Confidence            999999999999999998754   3677888899873  33222         2222111000001122 2333445556


Q ss_pred             CcEEEEEcCCccccCCCC-CCCcEEEec
Q 025203          223 YRIWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       223 ~~i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                      ...+++|||+.+|+.++. +|. ++.+.
T Consensus       171 ~~~~~~vGDs~~Di~~a~~ag~-~i~~~  197 (225)
T 1nnl_A          171 FKKIIMIGDGATDMEACPPADA-FIGFG  197 (225)
T ss_dssp             CSCEEEEESSHHHHTTTTTSSE-EEEEC
T ss_pred             CCcEEEEeCcHHhHHHHHhCCe-EEEec
Confidence            677999999999999985 676 76664

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.47  E-value=7.2e-14  Score=117.94  Aligned_cols=126  Identities=13%  Similarity=0.066  Sum_probs=90.1

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc------
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL------  176 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~------  176 (256)
                      ..++++||+||||++...|...                  ....+++||+.++|++|+++|++++++||++...      
T Consensus        24 ~~k~v~~D~DGTL~~~~~~~~~------------------~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~   85 (211)
T 2gmw_A           24 SVPAIFLDRDGTINVDHGYVHE------------------IDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTE   85 (211)
T ss_dssp             CBCEEEECSBTTTBCCCSSCCS------------------GGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCH
T ss_pred             cCCEEEEcCCCCeECCCCcccC------------------cccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCH
Confidence            3679999999999986532100                  1246789999999999999999999999998421      


Q ss_pred             ------HHHHHHHHHhcCCCCcceEEEecC------------CCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCcccc
Q 025203          177 ------RSYTVDNLIHVGYHGWASLELRGL------------EDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSF  236 (256)
Q Consensus       177 ------r~~T~~~L~~~G~~~~~~lilr~~------------~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl  236 (256)
                            .......|+++|+. ++.++....            ....||.+....   +.++..|.  +.+++|||+.+|+
T Consensus        86 ~~~~~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~---~~~~~lgi~~~~~~~VGD~~~Di  161 (211)
T 2gmw_A           86 AQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLL---SARDYLHIDMAASYMVGDKLEDM  161 (211)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHH---HHHHHHTBCGGGCEEEESSHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCc-eEEEEECCcCCCCcccccCccCcCCCCCHHHHH---HHHHHcCCCHHHEEEEcCCHHHH
Confidence                  23467788889987 666555432            234567664333   33344443  4589999999999


Q ss_pred             CCC-CCCCcE-EEecC
Q 025203          237 EGL-PKPKRT-FKLPN  250 (256)
Q Consensus       237 ~ga-~~g~r~-fklPn  250 (256)
                      .++ .+|.++ +.+.+
T Consensus       162 ~~a~~aG~~~~i~v~~  177 (211)
T 2gmw_A          162 QAAVAANVGTKVLVRT  177 (211)
T ss_dssp             HHHHHTTCSEEEEESS
T ss_pred             HHHHHCCCceEEEEec
Confidence            987 479998 77754

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.46  E-value=1.5e-13  Score=115.28  Aligned_cols=95  Identities=14%  Similarity=0.001  Sum_probs=67.7

Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC--c
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY--R  224 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~--~  224 (256)
                      ++||+.++++.|+++|++++++||.+.     +...|+..|+..++..++..+. ...||.+...   .+.++..|.  +
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-----~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~---~~~~~~lgi~~~  164 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSRN-----APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIF---LTAAAMLDVSPA  164 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHTTCTTTCSEECCC---------CCHH---HHHHHHHTSCGG
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCchh-----HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHH---HHHHHHcCCCHH
Confidence            799999999999999999999999843     5677888999877666655543 4566666332   344444454  4


Q ss_pred             EEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          225 IWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       225 i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .+++|||+.+|+.++ .+|.+++.+.+
T Consensus       165 ~~i~vGDs~~Di~~a~~aG~~~~~~~~  191 (233)
T 3nas_A          165 DCAAIEDAEAGISAIKSAGMFAVGVGQ  191 (233)
T ss_dssp             GEEEEECSHHHHHHHHHTTCEEEECC-
T ss_pred             HEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            599999999999987 47888888754

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.46  E-value=3.4e-13  Score=112.40  Aligned_cols=99  Identities=10%  Similarity=0.136  Sum_probs=75.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++++.|+++|++++++||....   .+...|+..|+..++..++..+ ....||.+..   ....++..|.
T Consensus        84 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~lgi  157 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLKDYGFHLVVATSKPTV---FSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDV---IRYAMESLNI  157 (226)
T ss_dssp             SCCBCTTHHHHHHHHHHHTCEEEEEEEEEHH---HHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHH---HHHHHHHHTC
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHHhCCHhheeeeeccCCCCCCCCCHHH---HHHHHHHhCc
Confidence            3578999999999999999999999998643   4677888899987765555544 4556776633   3344444554


Q ss_pred             c--EEEEEcCCccccCCC-CCCCcEEEec
Q 025203          224 R--IWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 ~--i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      .  .+++|||+.+|+.++ .+|.+++.+.
T Consensus       158 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~  186 (226)
T 3mc1_A          158 KSDDAIMIGDREYDVIGALKNNLPSIGVT  186 (226)
T ss_dssp             CGGGEEEEESSHHHHHHHHTTTCCEEEES
T ss_pred             CcccEEEECCCHHHHHHHHHCCCCEEEEc
Confidence            3  699999999999987 5788888775

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.46  E-value=1.9e-13  Score=114.07  Aligned_cols=102  Identities=9%  Similarity=-0.066  Sum_probs=76.0

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++++.|+++|++++++||.+..   .....|+..|+..++..++..+ ....||.+...   ...++..|
T Consensus        93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~---~~~~~~~~  166 (230)
T 3um9_A           93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRH---SIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVY---ELAMDTLH  166 (230)
T ss_dssp             TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHH---HHHHHHHT
T ss_pred             hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHH---HHHHHHHHCCChhhcceeEehhhcccCCCChHHH---HHHHHHhC
Confidence            45688999999999999999999999998753   3567788889887665555554 34567766433   33444445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .  ..+++|||+.+|+.++ .+|.+++.+..+
T Consensus       167 ~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~  198 (230)
T 3um9_A          167 LGESEILFVSCNSWDATGAKYFGYPVCWINRS  198 (230)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHHTCCEEEECTT
T ss_pred             CCcccEEEEeCCHHHHHHHHHCCCEEEEEeCC
Confidence            4  4599999999999987 478888887543

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.46  E-value=7.6e-14  Score=118.45  Aligned_cols=141  Identities=22%  Similarity=0.201  Sum_probs=89.5

Q ss_pred             CCCcEEEEecCCCccCChHHHH--HhccC--CCCC--CHHHHHHHHHh--cCCcchHHHHHHHHHHHHcCCeEEEEeCCC
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFK--KHGFG--GERL--NASSWEAWMKE--SKAPALEHTLNLFHEIKNRGVKIFLVSSRR  173 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~--~~~~g--~~~~--~~~~~~~wv~~--~~~~~~pg~~ell~~L~~~G~~i~ivTnR~  173 (256)
                      ...++|+||+||||+|+.+.+.  ...+.  ...|  +.+.|.++...  ....+.|++.++++.|+++|++++++||++
T Consensus        35 ~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~  114 (211)
T 2b82_A           35 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRS  114 (211)
T ss_dssp             CCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSC
T ss_pred             CCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence            3478999999999999987542  11111  1111  33445554321  123467899999999999999999999998


Q ss_pred             cccHHHHHHHHHh-cCCCCc--ceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCC-CCCcEEEec
Q 025203          174 ESLRSYTVDNLIH-VGYHGW--ASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       174 ~~~r~~T~~~L~~-~G~~~~--~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                      ........+.|.. +++...  +....    ...||++...   .+.+++.|.  +++|||+.+|+.++. +|.+++.+.
T Consensus       115 ~~~~~~~l~~l~~~f~~i~~~~~~~~~----~~~KP~p~~~---~~~~~~~g~--~l~VGDs~~Di~aA~~aG~~~i~v~  185 (211)
T 2b82_A          115 PTKTETVSKTLADNFHIPATNMNPVIF----AGDKPGQNTK---SQWLQDKNI--RIFYGDSDNDITAARDVGARGIRIL  185 (211)
T ss_dssp             CCSSCCHHHHHHHHTTCCTTTBCCCEE----CCCCTTCCCS---HHHHHHTTE--EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred             HHHHHHHHHHHHHhcCccccccchhhh----cCCCCCHHHH---HHHHHHCCC--EEEEECCHHHHHHHHHCCCeEEEEe
Confidence            6543334444433 222100  00011    2256766443   244455565  999999999999884 799999886


Q ss_pred             CC
Q 025203          250 NS  251 (256)
Q Consensus       250 np  251 (256)
                      ..
T Consensus       186 ~g  187 (211)
T 2b82_A          186 RA  187 (211)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.46  E-value=1.4e-13  Score=114.95  Aligned_cols=100  Identities=14%  Similarity=-0.011  Sum_probs=76.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++|++.++++.|+++|++++++||.+..   .....|+..|+..++..++..+. ...||.+.   ..+..++..|.
T Consensus        89 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~---~~~~~~~~l~~  162 (233)
T 3s6j_A           89 QIIALPGAVELLETLDKENLKWCIATSGGID---TATINLKALKLDINKINIVTRDDVSYGKPDPD---LFLAAAKKIGA  162 (233)
T ss_dssp             GCEECTTHHHHHHHHHHTTCCEEEECSSCHH---HHHHHHHTTTCCTTSSCEECGGGSSCCTTSTH---HHHHHHHHTTC
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCchh---hHHHHHHhcchhhhhheeeccccCCCCCCChH---HHHHHHHHhCC
Confidence            4688999999999999999999999998753   36778888999887665555543 45666653   33445555565


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        +.+++|||+.+|+.++ .+|.+++.+.+
T Consensus       163 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  192 (233)
T 3s6j_A          163 PIDECLVIGDAIWDMLAARRCKATGVGLLS  192 (233)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEEEGG
T ss_pred             CHHHEEEEeCCHHhHHHHHHCCCEEEEEeC
Confidence              4599999999999987 47888888754

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.46  E-value=2.2e-14  Score=120.38  Aligned_cols=126  Identities=9%  Similarity=-0.044  Sum_probs=83.4

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++|+||+||||++-. +..    ....+.        ......++||+.++|+.|+++|++++++||+++..   +.+
T Consensus         5 ~~kav~fDlDGTL~d~~-~~~----~~~~~~--------~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~---~~~   68 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFG-AQA----ATSDTP--------DDEHAQLTPGAQNALKALRDQGMPCAWIDELPEAL---STP   68 (196)
T ss_dssp             CCSCEEEETBTTTBCTT-STT----TSCSSC--------CGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHH---HHH
T ss_pred             cCCEEEEcCCCceEecc-ccc----cchhhc--------ccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHH---HHH
Confidence            46899999999999811 000    000000        11235789999999999999999999999987643   223


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC---cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY---RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~---~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .+   ++ .++.++...+....||++..   ..+.+++.|.   +.+++|||+.+|+++|. +|.+++-+...
T Consensus        69 ~~---~~-~~d~v~~~~~~~~~KP~p~~---~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g  134 (196)
T 2oda_A           69 LA---AP-VNDWMIAAPRPTAGWPQPDA---CWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASC  134 (196)
T ss_dssp             HH---TT-TTTTCEECCCCSSCTTSTHH---HHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSS
T ss_pred             hc---Cc-cCCEEEECCcCCCCCCChHH---HHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccC
Confidence            22   22 12334444444567887743   3344555564   35899999999999884 79999888653

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.45  E-value=1.5e-13  Score=115.07  Aligned_cols=100  Identities=13%  Similarity=0.031  Sum_probs=75.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++|++.++++.|+++|++++++||.+..   .....|+..|+..++..++..+ ....||.+...   ...++..|.
T Consensus        97 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~---~~~~~~~~~  170 (233)
T 3umb_A           97 CLSAFPENVPVLRQLREMGLPLGILSNGNPQ---MLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAY---ALAPRAFGV  170 (233)
T ss_dssp             SCEECTTHHHHHHHHHTTTCCEEEEESSCHH---HHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHH---THHHHHHTS
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHH---HHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHH---HHHHHHhCC
Confidence            5778999999999999999999999998754   3577788899987766555554 35567766433   233444454


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                        +.+++|||+.+|+.++. +|.+++.+..
T Consensus       171 ~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~  200 (233)
T 3umb_A          171 PAAQILFVSSNGWDACGATWHGFTTFWINR  200 (233)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEEECT
T ss_pred             CcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence              45999999999999874 7888888754

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.45  E-value=2.1e-13  Score=116.55  Aligned_cols=100  Identities=16%  Similarity=0.042  Sum_probs=75.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||.+..   .+...|+++|+..++..+...+. ...||.+...   .+.++..|.
T Consensus       112 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  185 (243)
T 2hsz_A          112 ISRLYPNVKETLEALKAQGYILAVVTNKPTK---HVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPF---YYLCGKFGL  185 (243)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHH---HHHHHHHTC
T ss_pred             cCccCCCHHHHHHHHHHCCCEEEEEECCcHH---HHHHHHHHcCchheEEEEEecccCCCCCcCHHHH---HHHHHHhCc
Confidence            4678899999999999999999999998754   36777888898877666665543 4456655332   333444453


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                        ..+++|||+.+|+.++. +|.+++.+.+
T Consensus       186 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~  215 (243)
T 2hsz_A          186 YPKQILFVGDSQNDIFAAHSAGCAVVGLTY  215 (243)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred             ChhhEEEEcCCHHHHHHHHHCCCeEEEEcC
Confidence              46899999999999874 7888888765

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.44  E-value=8.1e-14  Score=123.27  Aligned_cols=131  Identities=16%  Similarity=0.094  Sum_probs=99.1

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      .++.+++|+|||+.+....        .+|+   |   ......+++||+.++|+.|+++|++++++|||++.....+.+
T Consensus       158 ~~~~i~iD~dgtl~~~~~~--------~~~~---~---~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~  223 (301)
T 1ltq_A          158 KPKAVIFDVDGTLAKMNGR--------GPYD---L---EKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTK  223 (301)
T ss_dssp             SCEEEEEETBTTTBCCSSC--------CTTC---G---GGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTH
T ss_pred             ccceEEEeCCCCcccccCC--------Cchh---h---hhccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHH
Confidence            4578999999999886421        1222   2   233568899999999999999999999999999876556778


Q ss_pred             HHHh--------cCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCC-CCCCcEEEec
Q 025203          183 NLIH--------VGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       183 ~L~~--------~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      +|++        +|++ ++.++.+++. ..||++..+....+.+....++.+++|||+..|+.++ .+|.+++.+.
T Consensus       224 ~l~~~~~~~~~~~~~~-~~~~~~~~~~-~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~  297 (301)
T 1ltq_A          224 YYRMTRKWVEDIAGVP-LVMQCQREQG-DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA  297 (301)
T ss_dssp             HHHHHHHHHHHTTCCC-CSEEEECCTT-CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred             HHHhcccccccccCCC-chheeeccCC-CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEec
Confidence            8888        8994 6666666554 4578887766665555333456788999999999988 4799988764

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.44  E-value=2.5e-13  Score=112.16  Aligned_cols=133  Identities=11%  Similarity=0.012  Sum_probs=87.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCH----HHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNA----SSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSY  179 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~----~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~  179 (256)
                      +++|+||+||||++...   .. +.+.++..    ..++.+  ....+++||+.++++.|+++|++++++||++.  +..
T Consensus        27 ~k~vifDlDGTL~~~~~---~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~--~~~   98 (187)
T 2wm8_A           27 PKLAVFDLDYTLWPFWV---DT-HVDPPFHKSSDGTVRDRR--GQDVRLYPEVPEVLKRLQSLGVPGAAASRTSE--IEG   98 (187)
T ss_dssp             CSEEEECSBTTTBSSCT---TT-SSCSCCEECTTSCEECTT--CCEECCCTTHHHHHHHHHHHTCCEEEEECCSC--HHH
T ss_pred             cCEEEEcCCCCcchHHH---hh-ccCcchhhhcccchhhcc--CcccCcchhHHHHHHHHHHCCceEEEEeCCCC--hHH
Confidence            57999999999986431   11 11112110    000000  12357899999999999999999999999973  234


Q ss_pred             HHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          180 TVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       180 T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      +...|+.+|+..++..+....  .  +.+.   ...+.+++.|.  +.+++|||+.+|+.++ .+|.+++.+++.
T Consensus        99 ~~~~l~~~gl~~~f~~~~~~~--~--~k~~---~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g  166 (187)
T 2wm8_A           99 ANQLLELFDLFRYFVHREIYP--G--SKIT---HFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNG  166 (187)
T ss_dssp             HHHHHHHTTCTTTEEEEEESS--S--CHHH---HHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSS
T ss_pred             HHHHHHHcCcHhhcceeEEEe--C--chHH---HHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCC
Confidence            677888999987765442221  1  2222   22334444454  4589999999999887 579999988764

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.44  E-value=2.3e-13  Score=114.37  Aligned_cols=98  Identities=20%  Similarity=0.173  Sum_probs=69.9

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      .+++||+.++++.|+++|++++++||.+.    .+...|+.+|+..++..++.++ ....||++...   ...+++.|.+
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~----~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~~  166 (220)
T 2zg6_A           94 AFLYDDTLEFLEGLKSNGYKLALVSNASP----RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIF---GFALAKVGYP  166 (220)
T ss_dssp             EEECTTHHHHHHHHHTTTCEEEECCSCHH----HHHHHHHHHTCGGGCSEEC-----------CCHH---HHHHHHHCSS
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEeCCcH----HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHH---HHHHHHcCCC
Confidence            47899999999999999999999999864    2567888899987765555444 34567776433   3444556777


Q ss_pred             EEEEEcCCcc-ccCCCC-CCCcEEEecCC
Q 025203          225 IWGVVGDQWS-SFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       225 i~~~iGD~~s-Dl~ga~-~g~r~fklPnp  251 (256)
                      . ++|||+.+ |+.++. +|.+++.+...
T Consensus       167 ~-~~vgD~~~~Di~~a~~aG~~~i~v~~~  194 (220)
T 2zg6_A          167 A-VHVGDIYELDYIGAKRSYVDPILLDRY  194 (220)
T ss_dssp             E-EEEESSCCCCCCCSSSCSEEEEEBCTT
T ss_pred             e-EEEcCCchHhHHHHHHCCCeEEEECCC
Confidence            7 99999998 999885 79999888643

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.44  E-value=2.7e-13  Score=114.24  Aligned_cols=101  Identities=20%  Similarity=0.102  Sum_probs=74.6

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++++.|+++|++++++||.+..   .+...|+..|+..++..++..+ ....||.+...   ...++..|
T Consensus        80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~---~~~~~~~~  153 (222)
T 2nyv_A           80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEE---LSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPV---LKTLEILG  153 (222)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHH---HHHHHHHT
T ss_pred             ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHHcCCHHHheEEEecCcCCCCCCChHHH---HHHHHHhC
Confidence            35678999999999999999999999998643   3677788899877666555544 34456666433   23334444


Q ss_pred             C--cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          223 Y--RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      .  ..+++|||+.+|+.++. +|.+++.+.+
T Consensus       154 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~  184 (222)
T 2nyv_A          154 EEPEKALIVGDTDADIEAGKRAGTKTALALW  184 (222)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEEETT
T ss_pred             CCchhEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence            3  45899999999999874 7888877654

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.44  E-value=3.5e-13  Score=109.56  Aligned_cols=98  Identities=18%  Similarity=0.126  Sum_probs=73.7

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++|++.++++.|+++|++++++||.+.    .+...|+..|+..++..+...+. ...||.+.   .....++..|..
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~----~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~---~~~~~~~~~~~~  153 (190)
T 2fi1_A           81 PILFEGVSDLLEDISNQGGRHFLVSHRND----QVLEILEKTSIAAYFTEVVTSSSGFKRKPNPE---SMLYLREKYQIS  153 (190)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCT----HHHHHHHHTTCGGGEEEEECGGGCCCCTTSCH---HHHHHHHHTTCS
T ss_pred             CccCcCHHHHHHHHHHCCCcEEEEECCcH----HHHHHHHHcCCHhheeeeeeccccCCCCCCHH---HHHHHHHHcCCC
Confidence            34899999999999999999999999864    25677888898877665555443 44566553   234455555655


Q ss_pred             EEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          225 IWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       225 i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .+++|||+.+|+.++ .+|.+++.+.+
T Consensus       154 ~~~~iGD~~~Di~~a~~aG~~~~~~~~  180 (190)
T 2fi1_A          154 SGLVIGDRPIDIEAGQAAGLDTHLFTS  180 (190)
T ss_dssp             SEEEEESSHHHHHHHHHTTCEEEECSC
T ss_pred             eEEEEcCCHHHHHHHHHcCCeEEEECC
Confidence            789999999999987 47888887754

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.43  E-value=3.9e-14  Score=116.62  Aligned_cols=133  Identities=13%  Similarity=0.153  Sum_probs=89.8

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc----
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES----  175 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~----  175 (256)
                      .+++.++++||+||||+.+.+.    .     |....      ....+++||+.++|+.|+++|++++++||.+..    
T Consensus        10 ~~~~~k~~~~D~Dgtl~~~~~~----~-----~~~~~------~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~   74 (176)
T 2fpr_A           10 HGSSQKYLFIDRDGTLISEPPS----D-----FQVDR------FDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQS   74 (176)
T ss_dssp             ---CCEEEEECSBTTTBCCC------C-----CCCCS------GGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTT
T ss_pred             cCCcCcEEEEeCCCCeEcCCCC----C-----cCcCC------HHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccc
Confidence            3568999999999999987531    0     10000      123678999999999999999999999998421    


Q ss_pred             --------cHHHHHHHHHhcCCCCcceEEEe-----cCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC
Q 025203          176 --------LRSYTVDNLIHVGYHGWASLELR-----GLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       176 --------~r~~T~~~L~~~G~~~~~~lilr-----~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~  240 (256)
                              .+..+...|+..|+. ++.++.+     .+....||.+......   +++.|.  +.+++|||+.+|+.++.
T Consensus        75 ~~~~~~~~~~~~~~~~l~~~gl~-fd~v~~s~~~~~~~~~~~KP~p~~~~~~---~~~~gi~~~~~l~VGD~~~Di~~A~  150 (176)
T 2fpr_A           75 FPQADFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECDCRKPKVKLVERY---LAEQAMDRANSYVIGDRATDIQLAE  150 (176)
T ss_dssp             BCHHHHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCSSSTTSCGGGGGG---C----CCGGGCEEEESSHHHHHHHH
T ss_pred             cchHhhhhhHHHHHHHHHHcCCC-eeEEEEcCCCCcccccccCCCHHHHHHH---HHHcCCCHHHEEEEcCCHHHHHHHH
Confidence                    234567788889997 6566555     3334567776443222   223333  45899999999999874


Q ss_pred             -CCCcEEEecCC
Q 025203          241 -KPKRTFKLPNS  251 (256)
Q Consensus       241 -~g~r~fklPnp  251 (256)
                       +|.+++.+...
T Consensus       151 ~aG~~~i~v~~~  162 (176)
T 2fpr_A          151 NMGINGLRYDRE  162 (176)
T ss_dssp             HHTSEEEECBTT
T ss_pred             HcCCeEEEEcCC
Confidence             78888877543

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.43  E-value=3.8e-13  Score=110.55  Aligned_cols=99  Identities=10%  Similarity=0.068  Sum_probs=72.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++|++.++++.|+++| +++++||.+...   ....|+.+|+..++..++..+ ....||.+...   ...++..|.
T Consensus        84 ~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~---~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  156 (200)
T 3cnh_A           84 QSQPRPEVLALARDLGQRY-RMYSLNNEGRDL---NEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMY---RLGLTLAQV  156 (200)
T ss_dssp             TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHH---HHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHH---HHHHHHHTC
T ss_pred             cCccCccHHHHHHHHHHcC-CEEEEeCCcHHH---HHHHHHhCCHHHhcceEEeecccCCCCCCHHHH---HHHHHHcCC
Confidence            4568999999999999999 999999987543   566777888877655444433 34567766433   233344453


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        +.+++|||+.+|+.++ .+|.+++.+.+
T Consensus       157 ~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~  186 (200)
T 3cnh_A          157 RPEEAVMVDDRLQNVQAARAVGMHAVQCVD  186 (200)
T ss_dssp             CGGGEEEEESCHHHHHHHHHTTCEEEECSC
T ss_pred             CHHHeEEeCCCHHHHHHHHHCCCEEEEECC
Confidence              4589999999999987 47889888754

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.42  E-value=7.6e-13  Score=109.78  Aligned_cols=136  Identities=15%  Similarity=0.025  Sum_probs=88.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhc-cCC-------------CC----------------CCHHHHHHHHHhcCCcchHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHG-FGG-------------ER----------------LNASSWEAWMKESKAPALEHTL  153 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~-~g~-------------~~----------------~~~~~~~~wv~~~~~~~~pg~~  153 (256)
                      .++|+||+||||+++........ ++.             ..                ...+.+.++.  ...+++|++.
T Consensus         4 ~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   81 (217)
T 3m1y_A            4 QKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLKNMPLKLAKEVC--ESLPLFEGAL   81 (217)
T ss_dssp             CEEEEEECBTTTBSSCHHHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTTTCBHHHHHHHH--TTCCBCBTHH
T ss_pred             CcEEEEeCCCCCCCchhHHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhcCCCHHHHHHHH--hcCcCCCCHH
Confidence            57999999999999865443211 110             00                0112222332  3477999999


Q ss_pred             HHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEe-----------cCCCCCchhhhhhHHHHHHHHhcC
Q 025203          154 NLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELR-----------GLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       154 ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr-----------~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ++++.|+++|++++++||.+..   .....++..|+..++..++.           +.....||.+.   ..+..++..|
T Consensus        82 ~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~---~~~~~~~~~g  155 (217)
T 3m1y_A           82 ELVSALKEKNYKVVCFSGGFDL---ATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGE---MLLVLQRLLN  155 (217)
T ss_dssp             HHHHHHHTTTEEEEEEEEEEHH---HHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHH---HHHHHHHHHT
T ss_pred             HHHHHHHHCCCEEEEEcCCchh---HHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHH---HHHHHHHHcC
Confidence            9999999999999999998653   35677888899876544432           12223455442   2334444445


Q ss_pred             C--cEEEEEcCCccccCCCC-CCCcEEE
Q 025203          223 Y--RIWGVVGDQWSSFEGLP-KPKRTFK  247 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga~-~g~r~fk  247 (256)
                      .  +.+++|||+.+|+.++. +|.++..
T Consensus       156 ~~~~~~i~vGDs~~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          156 ISKTNTLVVGDGANDLSMFKHAHIKIAF  183 (217)
T ss_dssp             CCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred             CCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence            4  45899999999999874 6665544

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.41  E-value=3.4e-12  Score=110.96  Aligned_cols=95  Identities=13%  Similarity=-0.011  Sum_probs=69.5

Q ss_pred             CCcchHHHHHHHHHHHHcCC--eEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-----CCCchhhhhhHHHHHH
Q 025203          145 KAPALEHTLNLFHEIKNRGV--KIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-----DEYKKVQQYKAQVRKR  217 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~--~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-----~~~kp~~~~K~~~r~~  217 (256)
                      ...++||+.++++.|+++|+  +++++||.+..   .....|+.+|+..++..++..+.     ...||.+...   ...
T Consensus       140 ~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~---~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~---~~~  213 (282)
T 3nuq_A          140 ILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKN---HAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAF---EKA  213 (282)
T ss_dssp             TCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHH---HHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHH---HHH
T ss_pred             ccCcChhHHHHHHHHHhCCCCceEEEEECCChH---HHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHH---HHH
Confidence            36789999999999999999  99999998754   35677788899877666664432     2346655333   334


Q ss_pred             HHhcCC---cEEEEEcCCccccCCCC-CCCcE
Q 025203          218 LVKEGY---RIWGVVGDQWSSFEGLP-KPKRT  245 (256)
Q Consensus       218 l~~~g~---~i~~~iGD~~sDl~ga~-~g~r~  245 (256)
                      ++..|.   +.+++|||+.+|+.++. +|.++
T Consensus       214 ~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~  245 (282)
T 3nuq_A          214 MKESGLARYENAYFIDDSGKNIETGIKLGMKT  245 (282)
T ss_dssp             HHHHTCCCGGGEEEEESCHHHHHHHHHHTCSE
T ss_pred             HHHcCCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence            444453   56999999999999874 67743

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.41  E-value=6.5e-13  Score=115.28  Aligned_cols=100  Identities=12%  Similarity=0.101  Sum_probs=74.0

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+++||+.++|+.|++ |++++++||.+...   +...|+.+|+..++..++.+ +....||++...   ...++..|
T Consensus       118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~---~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~---~~~~~~~~  190 (260)
T 2gfh_A          118 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQT---QREKIEACACQSYFDAIVIGGEQKEEKPAPSIF---YHCCDLLG  190 (260)
T ss_dssp             HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHH---HHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHH---HHHHHHHT
T ss_pred             hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHH---HHHHHHhcCHHhhhheEEecCCCCCCCCCHHHH---HHHHHHcC
Confidence            356889999999999998 59999999997543   57778889998876655544 445678877443   33344445


Q ss_pred             C--cEEEEEcCC-ccccCCCC-CCC-cEEEecC
Q 025203          223 Y--RIWGVVGDQ-WSSFEGLP-KPK-RTFKLPN  250 (256)
Q Consensus       223 ~--~i~~~iGD~-~sDl~ga~-~g~-r~fklPn  250 (256)
                      .  ..+++|||+ .+|+.++. +|. +++.+.+
T Consensus       191 ~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~  223 (260)
T 2gfh_A          191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINK  223 (260)
T ss_dssp             CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECT
T ss_pred             CChhhEEEECCCchhhHHHHHHCCCceEEEEcC
Confidence            4  469999996 89999874 788 6777644

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.41  E-value=2.2e-13  Score=112.43  Aligned_cols=99  Identities=16%  Similarity=0.092  Sum_probs=74.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.+ ++.|+++ ++++++||++..   .+...|+++|+..++..++..+. ...||.+...   .+.+++.|.
T Consensus        72 ~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  143 (201)
T 2w43_A           72 NLKAYEDTKY-LKEISEI-AEVYALSNGSIN---EVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVY---KYFLDSIGA  143 (201)
T ss_dssp             TCEECGGGGG-HHHHHHH-SEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHH---HHHHHHHTC
T ss_pred             ccccCCChHH-HHHHHhC-CeEEEEeCcCHH---HHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHH---HHHHHhcCC
Confidence            4678999999 9999999 999999999743   36778888999877665555543 4567766433   233344455


Q ss_pred             cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 ~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      +.+++|||+.+|+.++ .+|.+++.++++
T Consensus       144 ~~~~~vGD~~~Di~~a~~aG~~~~~~~~~  172 (201)
T 2w43_A          144 KEAFLVSSNAFDVIGAKNAGMRSIFVNRK  172 (201)
T ss_dssp             SCCEEEESCHHHHHHHHHTTCEEEEECSS
T ss_pred             CcEEEEeCCHHHhHHHHHCCCEEEEECCC
Confidence            6789999999999987 478998887653

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.41  E-value=2.3e-13  Score=114.74  Aligned_cols=101  Identities=9%  Similarity=0.008  Sum_probs=73.3

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH---HhcCCCCcceEEEe-cCCCCCchhhhhhHHHHHHHHhcC
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL---IHVGYHGWASLELR-GLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L---~~~G~~~~~~lilr-~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ++.||+.++++.|+++ ++++++||.+........+.|   +..|+..++..++. .+....||++....   ..++..|
T Consensus       112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~---~~~~~~g  187 (229)
T 4dcc_A          112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFK---AVTEDAG  187 (229)
T ss_dssp             CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHH---HHHHHHT
T ss_pred             hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHH---HHHHHcC
Confidence            5679999999999999 999999999866543344666   77787665554444 34456677764433   3334445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .  +.+++|||+.+|+.++ .+|.+++.+.++
T Consensus       188 ~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~  219 (229)
T 4dcc_A          188 IDPKETFFIDDSEINCKVAQELGISTYTPKAG  219 (229)
T ss_dssp             CCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred             CCHHHeEEECCCHHHHHHHHHcCCEEEEECCH
Confidence            4  4699999999999987 489998888654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.40  E-value=8.6e-13  Score=113.10  Aligned_cols=101  Identities=12%  Similarity=0.060  Sum_probs=73.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc-ceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW-ASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~-~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...++||+.++++.|+++|++++++||.+...   ....|+..|+..+ +..+...+. ...||.+..   ....++..|
T Consensus       109 ~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~---~~~~~~~lg  182 (277)
T 3iru_A          109 RSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGM---MAPALIAAKEQGYTPASTVFATDVVRGRPFPDM---ALKVALELE  182 (277)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHH---HHHHHHHHT
T ss_pred             cCccCcCHHHHHHHHHHcCCeEEEEeCCchHH---HHHHHHhcCcccCCCceEecHHhcCCCCCCHHH---HHHHHHHcC
Confidence            46889999999999999999999999987543   4556666666555 555555443 455676633   334444445


Q ss_pred             C---cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y---RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~---~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .   +.+++|||+.+|+.++ .+|.+++.+...
T Consensus       183 i~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g  215 (277)
T 3iru_A          183 VGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS  215 (277)
T ss_dssp             CSCGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence            4   4599999999999987 478888887554

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.39  E-value=1.5e-13  Score=113.25  Aligned_cols=100  Identities=11%  Similarity=0.058  Sum_probs=68.0

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh-cCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcCC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH-VGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~-~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++|++.++++.|+++|++++++||.+....   ...+.. .|+..++..++.+ +....||++...   ...++..|.
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~---~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  163 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHT---TFWPEEYPEIRDAADHIYLSQDLGMRKPEARIY---QHVLQAEGF  163 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTT---SCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHH---HHHHHHHTC
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHH---HHHHHhccChhhheeeEEEecccCCCCCCHHHH---HHHHHHcCC
Confidence            57889999999999999999999999876542   112222 3444443344443 334566766333   233444454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        ..+++|||+.+|+.++ .+|.+++.+..+
T Consensus       164 ~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~  194 (206)
T 2b0c_A          164 SPSDTVFFDDNADNIEGANQLGITSILVKDK  194 (206)
T ss_dssp             CGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             CHHHeEEeCCCHHHHHHHHHcCCeEEEecCC
Confidence              4589999999999987 578888887654

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.39  E-value=8.8e-13  Score=111.40  Aligned_cols=99  Identities=9%  Similarity=0.025  Sum_probs=74.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++|++.++++.|+++|++++++||.+..   .+...|+..|+..++..++..+ ....||.+...   ...++..|.
T Consensus       108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~---~~~~~~~g~  181 (240)
T 3sd7_A          108 ENKIYENMKEILEMLYKNGKILLVATSKPTV---FAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVI---QYVLDLCNV  181 (240)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHH---HHHHHHHTC
T ss_pred             ccccCccHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHH---HHHHHHcCC
Confidence            4679999999999999999999999997643   4677888899987665555444 45567766433   334444454


Q ss_pred             ---cEEEEEcCCccccCCC-CCCCcEEEec
Q 025203          224 ---RIWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 ---~i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                         +.+++|||+.+|+.++ .+|.+++.+.
T Consensus       182 ~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~  211 (240)
T 3sd7_A          182 KDKDKVIMVGDRKYDIIGAKKIGIDSIGVL  211 (240)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             CCCCcEEEECCCHHHHHHHHHCCCCEEEEe
Confidence               4699999999999987 4688888775

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.39  E-value=8.7e-13  Score=112.95  Aligned_cols=98  Identities=8%  Similarity=-0.050  Sum_probs=73.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+  |++++++||++...   ....|+.+|+..++..++..+ ....||.+...   ...++..|.
T Consensus        91 ~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~---~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~~  162 (253)
T 1qq5_A           91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDM---LQALVANAGLTDSFDAVISVDAKRVFKPHPDSY---ALVEEVLGV  162 (253)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHH---HHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHH---HHHHHHHCC
T ss_pred             cCCCCccHHHHHHHHc--CCCEEEEeCcCHHH---HHHHHHHCCchhhccEEEEccccCCCCCCHHHH---HHHHHHcCC
Confidence            3578999999999999  99999999997543   567788889887765555544 34567766433   334444454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        +.+++|||+.+|+.++ .+|.+++.+..
T Consensus       163 ~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          163 TPAEVLFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             CHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence              4589999999999987 47888888754

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.39  E-value=4.9e-13  Score=113.82  Aligned_cols=101  Identities=13%  Similarity=0.035  Sum_probs=72.7

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh-cCCCCcceEEEecC---CCCCchhhhhhHHHHHHHHh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH-VGYHGWASLELRGL---EDEYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~-~G~~~~~~lilr~~---~~~~kp~~~~K~~~r~~l~~  220 (256)
                      ...++||+.++++.|+++|++++++||.+...   ....|.+ .|+..++..++..+   ....||.+..   .+..++.
T Consensus       110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~---~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~---~~~~~~~  183 (250)
T 3l5k_A          110 TAALMPGAEKLIIHLRKHGIPFALATSSRSAS---FDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDI---FLACAKR  183 (250)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHH---HHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHH---HHHHHHT
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH---HHHHHHhccCHHhheeeEEecchhhccCCCCChHH---HHHHHHH
Confidence            56799999999999999999999999997432   3444433 35555555455444   3456776633   3455566


Q ss_pred             cCC----cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          221 EGY----RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       221 ~g~----~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .|.    +.+++|||+.+|+.++. +|.+++.+.+.
T Consensus       184 lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~  219 (250)
T 3l5k_A          184 FSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG  219 (250)
T ss_dssp             SSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred             cCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence            664    56999999999999874 78888887553

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.38  E-value=3.8e-13  Score=115.12  Aligned_cols=101  Identities=13%  Similarity=0.005  Sum_probs=76.5

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceE-EEecC-CC-CCchhhhhhHHHHHHHHh
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASL-ELRGL-ED-EYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~l-ilr~~-~~-~~kp~~~~K~~~r~~l~~  220 (256)
                      ....++|++.++++.|+++|++++++||.+..   .+...|+..|+..++.. ++..+ .. ..||.+..   ..+.++.
T Consensus       107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~---~~~~~~~  180 (259)
T 4eek_A          107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERG---RLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDL---YTFAAQQ  180 (259)
T ss_dssp             TTCEECTTHHHHHHHHHHHTCCEEEECSSCHH---HHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHH---HHHHHHH
T ss_pred             ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHhcChHhhccceEEeHhhcCcCCCCChHH---HHHHHHH
Confidence            56789999999999999999999999998753   36778888898766544 55444 34 67776633   3444555


Q ss_pred             cCC--cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          221 EGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       221 ~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .|.  +.+++|||+.+|+.++ .+|.+++.+-+
T Consensus       181 lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~  213 (259)
T 4eek_A          181 LGILPERCVVIEDSVTGGAAGLAAGATLWGLLV  213 (259)
T ss_dssp             TTCCGGGEEEEESSHHHHHHHHHHTCEEEEECC
T ss_pred             cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEcc
Confidence            565  4599999999999987 47888887743

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.38  E-value=1.9e-12  Score=108.25  Aligned_cols=99  Identities=9%  Similarity=0.116  Sum_probs=74.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC-
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG-  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g-  222 (256)
                      ...++|++.++++.|+++ ++++++||.+..   .....|+..|+..++..++..+ ....||.+.   ...+.++..| 
T Consensus       101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~---~~~~~~~~~g~  173 (238)
T 3ed5_A          101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSH---TQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKE---YFNYVFERIPQ  173 (238)
T ss_dssp             CCCBCTTHHHHHHHHHTT-SEEEEEECSCHH---HHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHH---HHHHHHHTSTT
T ss_pred             cCCCCccHHHHHHHHHhc-CeEEEEeCCCHH---HHHHHHHHcChHhhhheEEEecccCCCCCChH---HHHHHHHHcCC
Confidence            468899999999999999 999999998753   3577788889987765555544 355666663   3344555666 


Q ss_pred             C--cEEEEEcCCc-cccCCC-CCCCcEEEecC
Q 025203          223 Y--RIWGVVGDQW-SSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       223 ~--~i~~~iGD~~-sDl~ga-~~g~r~fklPn  250 (256)
                      .  +.+++|||+. +|+.++ .+|.+++.+.+
T Consensus       174 ~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~  205 (238)
T 3ed5_A          174 FSAEHTLIIGDSLTADIKGGQLAGLDTCWMNP  205 (238)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHTTCEEEEECT
T ss_pred             CChhHeEEECCCcHHHHHHHHHCCCEEEEECC
Confidence            4  4599999998 999987 47888887743

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.38  E-value=8.3e-13  Score=111.95  Aligned_cols=99  Identities=12%  Similarity=0.083  Sum_probs=74.1

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC-
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      ..++||+.++++.|+++|++++++||.+..   .+...|+..|+..++..++..+ ....||++...   .+.++..|. 
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~g~~  166 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPV---KQWEKILRLELDDFFEHVIISDFEGVKKPHPKIF---KKALKAFNVK  166 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHH---HHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHH---HHHHHHHTCC
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCch---hHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHH---HHHHHHcCCC
Confidence            568899999999999999999999997653   3567888899987765555443 34567766332   334444454 


Q ss_pred             -cEEEEEcCCc-cccCCC-CCCCcEEEecC
Q 025203          224 -RIWGVVGDQW-SSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 -~i~~~iGD~~-sDl~ga-~~g~r~fklPn  250 (256)
                       +.+++|||+. +|+.++ .+|.+++.++.
T Consensus       167 ~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~  196 (241)
T 2hoq_A          167 PEEALMVGDRLYSDIYGAKRVGMKTVWFRY  196 (241)
T ss_dssp             GGGEEEEESCTTTTHHHHHHTTCEEEEECC
T ss_pred             cccEEEECCCchHhHHHHHHCCCEEEEECC
Confidence             4599999998 999987 47888888754

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.37  E-value=1.3e-12  Score=112.94  Aligned_cols=99  Identities=15%  Similarity=0.163  Sum_probs=74.9

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC-
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      .+++||+.++++.|+++|++++++||.+..    ....|+..|+..++..++..+ ....||.+....   ..++..|. 
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~----~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~---~~~~~~g~~  177 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR----LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQ---EALRLAHME  177 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCTT----HHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHH---HHHHHHTCC
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcHH----HHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHH---HHHHHcCCC
Confidence            478999999999999999999999997653    477888899987765555443 355677764433   33444454 


Q ss_pred             -cEEEEEcCCc-cccCCC-CCCCcEEEecCC
Q 025203          224 -RIWGVVGDQW-SSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 -~i~~~iGD~~-sDl~ga-~~g~r~fklPnp  251 (256)
                       ..+++|||++ +|+.++ .+|.+++.+..+
T Consensus       178 ~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~  208 (263)
T 3k1z_A          178 PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGP  208 (263)
T ss_dssp             GGGEEEEESCHHHHTHHHHTTTCEEEEECCS
T ss_pred             HHHEEEECCCcHHHHHHHHHCCCEEEEEcCC
Confidence             4599999997 999987 589999888654

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.37  E-value=8.2e-14  Score=115.50  Aligned_cols=127  Identities=10%  Similarity=0.016  Sum_probs=85.2

Q ss_pred             CCcEEEEecCCCccCChHHHHHhc---c-CCCCCCH--------------------HHHHHHHHh----cCCcchHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHG---F-GGERLNA--------------------SSWEAWMKE----SKAPALEHTLN  154 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~---~-g~~~~~~--------------------~~~~~wv~~----~~~~~~pg~~e  154 (256)
                      ++++|+||+||||+|+.+.+....   + |....+.                    +.+.+....    ...+++||+.+
T Consensus         1 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e   80 (193)
T 2i7d_A            1 RSVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQYRALRPDLADKVASVYEAPGFFLDLEPIPGALD   80 (193)
T ss_dssp             CCEEEEECSBTTTBCHHHHHHHHHHHHSTTSCCCCGGGCCSSCHHHHHHHHCTTHHHHHHHHHTSTTTTTTCCBCTTHHH
T ss_pred             CCcEEEEECCCcCccchhHHHHHHHHHhcCCCCCCHHHHHHhhHHHHHHHHhHHHHHHHHHHHHhcCccccCccCcCHHH
Confidence            367999999999999987664421   2 2211211                    122222222    24678999999


Q ss_pred             HHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcC
Q 025203          155 LFHEIKNR-GVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGD  231 (256)
Q Consensus       155 ll~~L~~~-G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD  231 (256)
                      +++.|+++ |++++++||++...   +...|+++|+  ++.+ +.+                ..+++.|  ...+++|||
T Consensus        81 ~L~~L~~~~g~~~~ivT~~~~~~---~~~~l~~~gl--f~~i-~~~----------------~~~~~~~~~~~~~~~vgD  138 (193)
T 2i7d_A           81 AVREMNDLPDTQVFICTSPLLKY---HHCVGEKYRW--VEQH-LGP----------------QFVERIILTRDKTVVLGD  138 (193)
T ss_dssp             HHHHHHTSTTEEEEEEECCCSSC---TTTHHHHHHH--HHHH-HCH----------------HHHTTEEECSCGGGBCCS
T ss_pred             HHHHHHhCCCCeEEEEeCCChhh---HHHHHHHhCc--hhhh-cCH----------------HHHHHcCCCcccEEEECC
Confidence            99999999 99999999998655   3455566665  3222 111                1233333  234789999


Q ss_pred             Cccc----cCCCC--CCCcEEEecCC
Q 025203          232 QWSS----FEGLP--KPKRTFKLPNS  251 (256)
Q Consensus       232 ~~sD----l~ga~--~g~r~fklPnp  251 (256)
                      +..|    +.++.  +|.+++.+++|
T Consensus       139 s~~dD~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          139 LLIDDKDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             EEEESSSCCCSSCSSCSSEEEEECCG
T ss_pred             chhhCcHHHhhcccccccceEEEEec
Confidence            9999    88874  79999999775

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.37  E-value=2.5e-12  Score=107.46  Aligned_cols=99  Identities=11%  Similarity=0.130  Sum_probs=73.3

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++++.|+ +|++++++||.+..   .....|+..|+..++..++..+ ....||.+..   ....++..|
T Consensus       104 ~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~lg  176 (240)
T 3qnm_A          104 TKSGLMPHAKEVLEYLA-PQYNLYILSNGFRE---LQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEI---FHFALSATQ  176 (240)
T ss_dssp             GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHH---HHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHH---HHHHHHHTT
T ss_pred             hcCCcCccHHHHHHHHH-cCCeEEEEeCCchH---HHHHHHHHcChHhhceeEEEeccCCCCCCCHHH---HHHHHHHcC
Confidence            34688999999999999 99999999998643   3567778889877765555544 3456666533   344555556


Q ss_pred             C--cEEEEEcCCc-cccCCC-CCCCcEEEec
Q 025203          223 Y--RIWGVVGDQW-SSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       223 ~--~i~~~iGD~~-sDl~ga-~~g~r~fklP  249 (256)
                      .  +.+++|||++ +|+.++ .+|.+++.+.
T Consensus       177 i~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~  207 (240)
T 3qnm_A          177 SELRESLMIGDSWEADITGAHGVGMHQAFYN  207 (240)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHTTCEEEEEC
T ss_pred             CCcccEEEECCCchHhHHHHHHcCCeEEEEc
Confidence            4  4599999996 999987 4788877763

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.36  E-value=3.6e-13  Score=111.46  Aligned_cols=98  Identities=9%  Similarity=0.056  Sum_probs=70.2

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh------cCCCCcceEEEecC-CCCCchhhhhhHHHHHHH
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH------VGYHGWASLELRGL-EDEYKKVQQYKAQVRKRL  218 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~------~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l  218 (256)
                      ..++|++.++++.|++ |++++++||.+...   ....++.      .|+..++..++..+ ....||.+...   ...+
T Consensus        88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~---~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~---~~~~  160 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYV---LDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIF---LEMI  160 (211)
T ss_dssp             EEECHHHHHHHHHHTT-TSEEEEEECCCHHH---HHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHH---HHHH
T ss_pred             cccChHHHHHHHHHHc-CCeEEEEeCCCHHH---HHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHH---HHHH
Confidence            3678999999999999 99999999987533   4556666      68776655555443 34566766333   3344


Q ss_pred             HhcCC--cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          219 VKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       219 ~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      +..|.  +.+++|||+.+|+.++ .+|.+++.+..
T Consensus       161 ~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~  195 (211)
T 2i6x_A          161 ADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN  195 (211)
T ss_dssp             HHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred             HHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence            44454  4599999999999987 47888877754

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.36  E-value=4.3e-12  Score=106.76  Aligned_cols=102  Identities=14%  Similarity=0.028  Sum_probs=66.3

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce--EEEecCCCCCchh-----hhhhHH-HHHHH
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS--LELRGLEDEYKKV-----QQYKAQ-VRKRL  218 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~--lilr~~~~~~kp~-----~~~K~~-~r~~l  218 (256)
                      .++||+.++++.|+++|++++++||.+..   .+...++.+|++.+..  +...+....+++.     ..-|.. +...+
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~  168 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSF---VTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWL  168 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHH
Confidence            56999999999999999999999998754   3677888899875421  1111110011110     112222 33444


Q ss_pred             HhcC-----CcEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          219 VKEG-----YRIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       219 ~~~g-----~~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      +..|     ...+++|||+.+|+.++. +|..+..-|++
T Consensus       169 ~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~  207 (232)
T 3fvv_A          169 AGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSP  207 (232)
T ss_dssp             HHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCH
T ss_pred             HHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCH
Confidence            4556     457999999999998874 66666655553

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.36  E-value=3.1e-12  Score=106.12  Aligned_cols=98  Identities=12%  Similarity=0.064  Sum_probs=72.1

Q ss_pred             cCCcchHHHHHHHHHHHHcC-CeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRG-VKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G-~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++++.|+++| ++++++||.+..   .....|+..|+..++..++...    ||.+   ...+..++..|
T Consensus       102 ~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~---~~~~~l~~~~~~~~f~~~~~~~----kpk~---~~~~~~~~~lg  171 (234)
T 3ddh_A          102 MPIELLPGVKETLKTLKETGKYKLVVATKGDLL---DQENKLERSGLSPYFDHIEVMS----DKTE---KEYLRLLSILQ  171 (234)
T ss_dssp             CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHH---HHHHHHHHHTCGGGCSEEEEES----CCSH---HHHHHHHHHHT
T ss_pred             ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchH---HHHHHHHHhCcHhhhheeeecC----CCCH---HHHHHHHHHhC
Confidence            34688999999999999999 999999987643   3567788889877765555432    2333   22334445556


Q ss_pred             C--cEEEEEcCCc-cccCCCC-CCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQW-SSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~-sDl~ga~-~g~r~fklPnp  251 (256)
                      .  +.+++|||+. +|+.++. +|.+++.+++.
T Consensus       172 i~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~  204 (234)
T 3ddh_A          172 IAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFE  204 (234)
T ss_dssp             CCGGGEEEEESCCCCCCHHHHHHTCEEEECCCC
T ss_pred             CCcceEEEECCCcHHHhHHHHHCCCeEEEecCC
Confidence            5  4599999997 9999874 78888888654

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.36  E-value=4.7e-13  Score=110.74  Aligned_cols=139  Identities=14%  Similarity=0.129  Sum_probs=95.3

Q ss_pred             CcEEEEecCCCccCChHHHHHh------ccCCC---------------------CCCH----HHHHHHHHh-----cCCc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH------GFGGE---------------------RLNA----SSWEAWMKE-----SKAP  147 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~------~~g~~---------------------~~~~----~~~~~wv~~-----~~~~  147 (256)
                      .++|+||+||||+++.+.+...      .+|..                     ..+.    +.+.+|...     ...+
T Consensus         4 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIE   83 (209)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTTCGGGCE
T ss_pred             ccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHHcCCCHHHHHHHHHHHHHHHhhhcccCC
Confidence            4799999999999998654321      12210                     0011    113333332     3467


Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC--c
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY--R  224 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~--~  224 (256)
                      ++|++.++++.|+++ ++++++||.+..   .+...|+..|+..++..++..+. ...||++..   ..+.++..|.  +
T Consensus        84 ~~~~~~~~l~~l~~~-~~~~i~s~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~---~~~~~~~~~~~~~  156 (209)
T 2hdo_A           84 LYPGITSLFEQLPSE-LRLGIVTSQRRN---ELESGMRSYPFMMRMAVTISADDTPKRKPDPLP---LLTALEKVNVAPQ  156 (209)
T ss_dssp             ECTTHHHHHHHSCTT-SEEEEECSSCHH---HHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHH---HHHHHHHTTCCGG
T ss_pred             cCCCHHHHHHHHHhc-CcEEEEeCCCHH---HHHHHHHHcChHhhccEEEecCcCCCCCCCcHH---HHHHHHHcCCCcc
Confidence            899999999999999 999999998743   36778888898777665655543 456776633   3344455554  4


Q ss_pred             EEEEEcCCccccCCCC-CCCcEEEec
Q 025203          225 IWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       225 i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                      .+++|||+.+|+.++. +|.+++.+.
T Consensus       157 ~~i~vGD~~~Di~~a~~aG~~~~~~~  182 (209)
T 2hdo_A          157 NALFIGDSVSDEQTAQAANVDFGLAV  182 (209)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEEG
T ss_pred             cEEEECCChhhHHHHHHcCCeEEEEc
Confidence            6999999999999874 688887764

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.35  E-value=6.1e-13  Score=112.38  Aligned_cols=126  Identities=12%  Similarity=0.053  Sum_probs=88.2

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccH----
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLR----  177 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r----  177 (256)
                      +..++++||+||||++...|...                  .....++||+.++|++|+++|++++++||++...+    
T Consensus        29 ~~~k~i~~D~DGtl~~~~~y~~~------------------~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~   90 (218)
T 2o2x_A           29 PHLPALFLDRDGTINVDTDYPSD------------------PAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFG   90 (218)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTTC------------------GGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCC
T ss_pred             hcCCEEEEeCCCCcCCCCcccCC------------------cccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCccccc
Confidence            34689999999999986432110                  12367899999999999999999999999975210    


Q ss_pred             --------HHHHHHHHhcCCCCcceEEEec------------CCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccc
Q 025203          178 --------SYTVDNLIHVGYHGWASLELRG------------LEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSS  235 (256)
Q Consensus       178 --------~~T~~~L~~~G~~~~~~lilr~------------~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sD  235 (256)
                              ......|+++|+. ++..+...            ....+||.+...   ...+++.|.  +.+++|||+.+|
T Consensus        91 ~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~---~~~~~~~~i~~~~~~~VGD~~~D  166 (218)
T 2o2x_A           91 WSAFAAVNGRVLELLREEGVF-VDMVLACAYHEAGVGPLAIPDHPMRKPNPGML---VEAGKRLALDLQRSLIVGDKLAD  166 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCC-CSEEEEECCCTTCCSTTCCSSCTTSTTSCHHH---HHHHHHHTCCGGGCEEEESSHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCc-eeeEEEeecCCCCceeecccCCccCCCCHHHH---HHHHHHcCCCHHHEEEEeCCHHH
Confidence                    3467788889986 44444442            223456666333   233344444  458999999999


Q ss_pred             cCCCC-CCCcE-EEec
Q 025203          236 FEGLP-KPKRT-FKLP  249 (256)
Q Consensus       236 l~ga~-~g~r~-fklP  249 (256)
                      +.++. +|.++ +.+.
T Consensus       167 i~~a~~aG~~~~i~v~  182 (218)
T 2o2x_A          167 MQAGKRAGLAQGWLVD  182 (218)
T ss_dssp             HHHHHHTTCSEEEEET
T ss_pred             HHHHHHCCCCEeEEEe
Confidence            99874 78888 7653

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.35  E-value=2.2e-12  Score=106.75  Aligned_cols=136  Identities=13%  Similarity=0.163  Sum_probs=87.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCC-----CC---------------------HHHHHHHHHhcCCcchHHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGER-----LN---------------------ASSWEAWMKESKAPALEHTLNLFH  157 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~-----~~---------------------~~~~~~wv~~~~~~~~pg~~ell~  157 (256)
                      .++|+||+||||++..-......+|...     .+                     .+.+.++.  ...+++||+.++++
T Consensus         2 ~k~viFD~DGTL~d~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~   79 (206)
T 1rku_A            2 MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVI--ATLKPLEGAVEFVD   79 (206)
T ss_dssp             CEEEEEESBTTTBCCHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHH--TTCCCCTTHHHHHH
T ss_pred             CcEEEEccCCcchhhHHHHHHHHcCChHHHHHhcCcCCHHHHHHHHHHHHHHCCCCHHHHHHHH--HhcCCCccHHHHHH
Confidence            5799999999999942211111233221     11                     11122222  35688999999999


Q ss_pred             HHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-e-EEEecCCC--CC-chhhhhhHHHHHHHHhcCCcEEEEEcCC
Q 025203          158 EIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-S-LELRGLED--EY-KKVQQYKAQVRKRLVKEGYRIWGVVGDQ  232 (256)
Q Consensus       158 ~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~-lilr~~~~--~~-kp~~~~K~~~r~~l~~~g~~i~~~iGD~  232 (256)
                      .|+++ ++++++||.+..   .+...++++|+..++ . ++...+..  .. +|.+..|....+.+.. ....+++|||+
T Consensus        80 ~l~~~-~~~~i~s~~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~  154 (206)
T 1rku_A           80 WLRER-FQVVILSDTFYE---FSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS  154 (206)
T ss_dssp             HHHTT-SEEEEEEEEEHH---HHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred             HHHhc-CcEEEEECChHH---HHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHh-cCCEEEEEeCC
Confidence            99999 999999998643   467888899998765 3 33333331  11 2555555444444433 24578999999


Q ss_pred             ccccCCCC-CCCcEE
Q 025203          233 WSSFEGLP-KPKRTF  246 (256)
Q Consensus       233 ~sDl~ga~-~g~r~f  246 (256)
                      .+|+.++. +|..+.
T Consensus       155 ~~Di~~a~~aG~~~~  169 (206)
T 1rku_A          155 YNDTTMLSEAHAGIL  169 (206)
T ss_dssp             STTHHHHHHSSEEEE
T ss_pred             hhhHHHHHhcCccEE
Confidence            99999874 677655

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.34  E-value=1.6e-12  Score=113.26  Aligned_cols=100  Identities=11%  Similarity=-0.039  Sum_probs=74.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh---cCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH---VGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~---~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~  221 (256)
                      ..+++||+.++|+.|+++|++++++||.+...   ....|+.   .|+..++..++..+.. .||++....   ..+++.
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~~~~~~l~~~fd~i~~~~~~-~KP~p~~~~---~~~~~l  200 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEA---QKLLFGHSTEGDILELVDGHFDTKIG-HKVESESYR---KIADSI  200 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHTBTTBCCGGGCSEEECGGGC-CTTCHHHHH---HHHHHH
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHH---HHHHHHhhcccChHhhccEEEecCCC-CCCCHHHHH---HHHHHh
Confidence            46789999999999999999999999997543   3455553   4687776666655434 888875433   333444


Q ss_pred             CC--cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          222 GY--RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       222 g~--~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      |.  ..+++|||+.+|+.+|. +|.+++.++.+
T Consensus       201 g~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~  233 (261)
T 1yns_A          201 GCSTNNILFLTDVTREASAAEEADVHVAVVVRP  233 (261)
T ss_dssp             TSCGGGEEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCC
Confidence            54  46999999999999884 89999988653

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.33  E-value=2.5e-12  Score=107.33  Aligned_cols=99  Identities=12%  Similarity=-0.010  Sum_probs=69.5

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE-ecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL-RGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil-r~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..++|++.++++.|++ |++++++||.+...   ....++.++  .++..+. ..+....||++..+....+.++..|..
T Consensus        98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~---~~~~l~~l~--~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~  171 (240)
T 3smv_A           98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNE---FKLSNAKLG--VEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIE  171 (240)
T ss_dssp             CCBCTTHHHHHHHHHH-HSEEEEEESSCHHH---HHHHHTTTC--SCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCcHHHHHHHHHh-CCeEEEEeCCChhH---HHHHHHhcC--CccCEEEEccccCCCCCCHHHHHHHHHHHHhcCCC
Confidence            4789999999999999 89999999987543   344555533  3444444 444456778775443332226666654


Q ss_pred             --EEEEEcCCc-cccCCCC-CCCcEEEecC
Q 025203          225 --IWGVVGDQW-SSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       225 --i~~~iGD~~-sDl~ga~-~g~r~fklPn  250 (256)
                        .+++|||+. +|+.++. +|.+++.+..
T Consensus       172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~  201 (240)
T 3smv_A          172 KKDILHTAESLYHDHIPANDAGLVSAWIYR  201 (240)
T ss_dssp             GGGEEEEESCTTTTHHHHHHHTCEEEEECT
T ss_pred             chhEEEECCCchhhhHHHHHcCCeEEEEcC
Confidence              599999997 9999874 7888887653

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.33  E-value=2.3e-12  Score=107.70  Aligned_cols=101  Identities=13%  Similarity=0.098  Sum_probs=73.4

Q ss_pred             CCcchHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCC--CchhhhhhHHHHHHHHhc
Q 025203          145 KAPALEHTLNLFHEIKNR-GVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDE--YKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~-G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~--~kp~~~~K~~~r~~l~~~  221 (256)
                      ...++||+.++++.|+++ |++++++||.+..   .+...|+..|+..++..+....+..  .||.+.   ...+.++..
T Consensus        91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~---~~~~~~~~l  164 (234)
T 2hcf_A           91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEA---SGRHKLKLPGIDHYFPFGAFADDALDRNELPHI---ALERARRMT  164 (234)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHH---HHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHH---HHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHH---HHHHHHHHCCchhhcCcceecCCCcCccchHHH---HHHHHHHHh
Confidence            356889999999999999 9999999998743   3667788899987765544443322  233332   223444444


Q ss_pred             C----CcEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          222 G----YRIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       222 g----~~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      |    .+.+++|||+.+|+.++ .+|.+++.+.+.
T Consensus       165 g~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~  199 (234)
T 2hcf_A          165 GANYSPSQIVIIGDTEHDIRCARELDARSIAVATG  199 (234)
T ss_dssp             CCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS
T ss_pred             CCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC
Confidence            5    34699999999999987 579998888654

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.33  E-value=3.6e-12  Score=103.59  Aligned_cols=100  Identities=12%  Similarity=0.046  Sum_probs=72.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...+.|++.++++.++++|++++++|+.....   .. .++..|+..++..++..+ ....||.+...   ...++..|.
T Consensus        83 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~---~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~---~~~~~~~~i  155 (207)
T 2go7_A           83 QVVLMPGAREVLAWADESGIQQFIYTHKGNNA---FT-ILKDLGVESYFTEILTSQSGFVRKPSPEAA---TYLLDKYQL  155 (207)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTHH---HH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHH---HHHHHHHTC
T ss_pred             cceeCcCHHHHHHHHHHCCCeEEEEeCCchHH---HH-HHHHcCchhheeeEEecCcCCCCCCCcHHH---HHHHHHhCC
Confidence            45678999999999999999999999987543   34 667778877665555543 34456655333   233344443


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                        +.+++|||+.+|+.++. +|..++.+.|.
T Consensus       156 ~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~  186 (207)
T 2go7_A          156 NSDNTYYIGDRTLDVEFAQNSGIQSINFLES  186 (207)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred             CcccEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence              45899999999999874 78888888765

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.33  E-value=6.9e-12  Score=106.87  Aligned_cols=96  Identities=10%  Similarity=0.016  Sum_probs=69.4

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ....++|++.++++.|+ +|++++++||.+..   .....|+..|+..++..++..    .||.+..   ....++..|.
T Consensus       109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~---~~~~~l~~~~l~~~f~~i~~~----~kp~~~~---~~~~~~~l~~  177 (251)
T 2pke_A          109 HPVEVIAGVREAVAAIA-ADYAVVLITKGDLF---HQEQKIEQSGLSDLFPRIEVV----SEKDPQT---YARVLSEFDL  177 (251)
T ss_dssp             CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHH---HHHHHHHHHSGGGTCCCEEEE----SCCSHHH---HHHHHHHHTC
T ss_pred             ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHH---HHHHHHHHcCcHHhCceeeee----CCCCHHH---HHHHHHHhCc
Confidence            34678999999999999 99999999998743   356777888887665444442    2344422   2334444454


Q ss_pred             --cEEEEEcCCc-cccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQW-SSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga~-~g~r~fklPn  250 (256)
                        +.+++|||+. +|+.++. +|.+++.+++
T Consensus       178 ~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~  208 (251)
T 2pke_A          178 PAERFVMIGNSLRSDVEPVLAIGGWGIYTPY  208 (251)
T ss_dssp             CGGGEEEEESCCCCCCHHHHHTTCEEEECCC
T ss_pred             CchhEEEECCCchhhHHHHHHCCCEEEEECC
Confidence              4699999999 9999874 7888888754

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.33  E-value=3.6e-12  Score=104.22  Aligned_cols=126  Identities=11%  Similarity=0.160  Sum_probs=85.3

Q ss_pred             CcEEEEecCCCccCChHHHHHh---ccCCC---------C----C--CHHHHHHHHHh----cCCcchHHHHHHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH---GFGGE---------R----L--NASSWEAWMKE----SKAPALEHTLNLFHEIKN  161 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~---~~g~~---------~----~--~~~~~~~wv~~----~~~~~~pg~~ell~~L~~  161 (256)
                      +++|+||+||||+|+.+.+...   .+|..         .    +  +.+.+.++...    ...+++||+.++|+.|++
T Consensus         4 ~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~   83 (180)
T 3bwv_A            4 RQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLKHMIPEHEGLVMDILKEPGFFRNLDVMPHAQEVVKQLNE   83 (180)
T ss_dssp             CCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGCTTCCC--------CHHHHHHHSTTGGGSCCBCTTHHHHHHHHTT
T ss_pred             ccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHHcCccHHHHCCchHHHHHHHHhCcchhccCCCCcCHHHHHHHHHh
Confidence            3799999999999999875432   23311         0    0  11234444322    356899999999999998


Q ss_pred             cCCeEEEEeCCCc--ccHHHHHHHHHh-cCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          162 RGVKIFLVSSRRE--SLRSYTVDNLIH-VGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       162 ~G~~i~ivTnR~~--~~r~~T~~~L~~-~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      + ++++++||+..  .....+..+|.. +|...++..++..+..        +      +     ..+++|||+..++..
T Consensus        84 ~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~--------~------l-----~~~l~ieDs~~~i~~  143 (180)
T 3bwv_A           84 H-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN--------I------I-----LADYLIDDNPKQLEI  143 (180)
T ss_dssp             T-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG--------G------B-----CCSEEEESCHHHHHH
T ss_pred             c-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC--------e------e-----cccEEecCCcchHHH
Confidence            5 99999999843  113345677776 5665567777765431        0      1     347899999999975


Q ss_pred             CCCCCcEEEecCC
Q 025203          239 LPKPKRTFKLPNS  251 (256)
Q Consensus       239 a~~g~r~fklPnp  251 (256)
                      + +| +++.+|+|
T Consensus       144 a-aG-~~i~~~~~  154 (180)
T 3bwv_A          144 F-EG-KSIMFTAS  154 (180)
T ss_dssp             C-SS-EEEEECCG
T ss_pred             h-CC-CeEEeCCC
Confidence            4 68 99999865

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.33  E-value=3.9e-12  Score=104.63  Aligned_cols=143  Identities=14%  Similarity=0.070  Sum_probs=87.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhc--------------------c-CCCCC-------------CHHHHHHHHHh-cCCcc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHG--------------------F-GGERL-------------NASSWEAWMKE-SKAPA  148 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~--------------------~-g~~~~-------------~~~~~~~wv~~-~~~~~  148 (256)
                      .++|+||+||||+++........                    . +...|             ..+.+.++... ....+
T Consensus         4 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (219)
T 3kd3_A            4 MKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRLAIASPTKQSIKEFSNKYCPNLL   83 (219)
T ss_dssp             CEEEEECCCCCCBSSCHHHHHHTTTTTTCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHCCCBHHHHHHHHHHHTTTTB
T ss_pred             ceEEEEeCCCCCcCcccHHHHHHHHHhcccchHHHHHHHHHHHhcCcccHHHHHHHHHhhccCCHHHHHHHHHhhccccC
Confidence            58999999999999765432110                    0 00111             11223333332 33568


Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC--cc--eEEEecCC-----CCCchhhhhhHHHHHHHH
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG--WA--SLELRGLE-----DEYKKVQQYKAQVRKRLV  219 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~--~~--~lilr~~~-----~~~kp~~~~K~~~r~~l~  219 (256)
                      +|++.++++.|+++|++++++||.+..   .....++.+|+..  +.  .++...++     ...+|.+..+.....+.-
T Consensus        84 ~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  160 (219)
T 3kd3_A           84 TDGIKELVQDLKNKGFEIWIFSGGLSE---SIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK  160 (219)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred             ChhHHHHHHHHHHCCCeEEEEcCCcHH---HHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence            899999999999999999999998654   3567778888853  22  23332222     223444433322222221


Q ss_pred             hcCCcEEEEEcCCccccCCCCCCCcEEEec
Q 025203          220 KEGYRIWGVVGDQWSSFEGLPKPKRTFKLP  249 (256)
Q Consensus       220 ~~g~~i~~~iGD~~sDl~ga~~g~r~fklP  249 (256)
                      ....+.+++|||+.+|+.++.+|.+++.+.
T Consensus       161 ~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~  190 (219)
T 3kd3_A          161 GLIDGEVIAIGDGYTDYQLYEKGYATKFIA  190 (219)
T ss_dssp             GGCCSEEEEEESSHHHHHHHHHTSCSEEEE
T ss_pred             CCCCCCEEEEECCHhHHHHHhCCCCcEEEe
Confidence            224567999999999999877777755543

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.32  E-value=3.6e-12  Score=114.69  Aligned_cols=139  Identities=13%  Similarity=0.003  Sum_probs=90.5

Q ss_pred             CCCCcEEEEecCCCccCChHHHHHh-ccCC--------------C---------------CCCHHHHHHHHHhcCCcchH
Q 025203          101 GDGKDAWIFDVDDTLLSTIPYFKKH-GFGG--------------E---------------RLNASSWEAWMKESKAPALE  150 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~~~~~-~~g~--------------~---------------~~~~~~~~~wv~~~~~~~~p  150 (256)
                      ...+++|+||+||||+++....... .+|.              .               ....+.+.+|..  ..+++|
T Consensus       105 ~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~~~--~~~l~p  182 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCD--RMTLSP  182 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHH--TCCBCT
T ss_pred             CCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHh--CCEECc
Confidence            3567899999999999987432211 1111              0               112233444433  578999


Q ss_pred             HHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-----------CCCCCchhhhhhHHHHHHHH
Q 025203          151 HTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-----------LEDEYKKVQQYKAQVRKRLV  219 (256)
Q Consensus       151 g~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-----------~~~~~kp~~~~K~~~r~~l~  219 (256)
                      |+.++++.|+++|++++++||...   ..+...++++|+..++..++..           +....||.+..   ..+.++
T Consensus       183 g~~e~L~~Lk~~G~~v~IvSn~~~---~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~---~~~~~~  256 (317)
T 4eze_A          183 GLLTILPVIKAKGFKTAIISGGLD---IFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQT---LVDLAA  256 (317)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEH---HHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH---HHHHHH
T ss_pred             CHHHHHHHHHhCCCEEEEEeCccH---HHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHH---HHHHHH
Confidence            999999999999999999999864   3477888889998764433221           11123444422   333444


Q ss_pred             hcCC--cEEEEEcCCccccCCCC-CCCcEEE
Q 025203          220 KEGY--RIWGVVGDQWSSFEGLP-KPKRTFK  247 (256)
Q Consensus       220 ~~g~--~i~~~iGD~~sDl~ga~-~g~r~fk  247 (256)
                      +.|.  +.+++|||+.+|+.++. +|..+..
T Consensus       257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~  287 (317)
T 4eze_A          257 RLNIATENIIACGDGANDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred             HcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence            4454  46999999999999874 5654443

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.32  E-value=1e-11  Score=102.57  Aligned_cols=101  Identities=14%  Similarity=0.012  Sum_probs=73.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++|++.++++.+++.|++++++|+.+...   ....++..|+..++..++..+ ....||.+.   ...+.++..|.
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~---~~~~~~~~~~i  165 (226)
T 1te2_A           92 TRPLLPGVREAVALCKEQGLLVGLASASPLHM---LEKVLTMFDLRDSFDALASAEKLPYSKPHPQ---VYLDCAAKLGV  165 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGCSEEEECTTSSCCTTSTH---HHHHHHHHHTS
T ss_pred             cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHhcCcHhhCcEEEeccccCCCCCChH---HHHHHHHHcCC
Confidence            46788999999999999999999999987543   566778888877655555443 344565553   23344444454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        +.+++|||+.+|+.++ .+|..++.+.++
T Consensus       166 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~  196 (226)
T 1te2_A          166 DPLTCVALEDSVNGMIASKAARMRSIVVPAP  196 (226)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred             CHHHeEEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence              4589999999999987 478888776544

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.32  E-value=3.5e-12  Score=105.38  Aligned_cols=101  Identities=12%  Similarity=0.075  Sum_probs=73.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...+.|++.++++.++++|++++++|+.+..   .....++..|+..++..+...+ ....||.+.   ...+.++..|.
T Consensus        87 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~  160 (225)
T 3d6j_A           87 NTILFPDTLPTLTHLKKQGIRIGIISTKYRF---RILSFLRNHMPDDWFDIIIGGEDVTHHKPDPE---GLLLAIDRLKA  160 (225)
T ss_dssp             GCEECTTHHHHHHHHHHHTCEEEEECSSCHH---HHHHHHHTSSCTTCCSEEECGGGCSSCTTSTH---HHHHHHHHTTC
T ss_pred             cCccCcCHHHHHHHHHHCCCeEEEEECCCHH---HHHHHHHHcCchhheeeeeehhhcCCCCCChH---HHHHHHHHhCC
Confidence            4567899999999999999999999998643   3567778888877655555443 234555442   23344455564


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        +.+++|||+.+|+.++ .+|.+++.+.++
T Consensus       161 ~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~  191 (225)
T 3d6j_A          161 CPEEVLYIGDSTVDAGTAAAAGVSFTGVTSG  191 (225)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEETTS
T ss_pred             ChHHeEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence              3589999999999987 468888887554

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.32  E-value=1.2e-11  Score=102.94  Aligned_cols=101  Identities=19%  Similarity=0.128  Sum_probs=73.8

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC--
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY--  223 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~--  223 (256)
                      .++|++.++++.|+++|++++++||.....+......++..|+..++..++..+ ....||.+..   ....++..|.  
T Consensus        99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~lgi~~  175 (235)
T 2om6_A           99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEM---FEKVLNSFEVKP  175 (235)
T ss_dssp             GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHH---HHHHHHHTTCCG
T ss_pred             CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHH---HHHHHHHcCCCc
Confidence            468999999999999999999999987111334667888889887765555443 3455666533   3344555564  


Q ss_pred             cEEEEEcCCc-cccCCC-CCCCcEEEecC
Q 025203          224 RIWGVVGDQW-SSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 ~i~~~iGD~~-sDl~ga-~~g~r~fklPn  250 (256)
                      +.+++|||+. +|+.++ .+|.+++.++.
T Consensus       176 ~~~~~iGD~~~nDi~~a~~aG~~~~~~~~  204 (235)
T 2om6_A          176 EESLHIGDTYAEDYQGARKVGMWAVWINQ  204 (235)
T ss_dssp             GGEEEEESCTTTTHHHHHHTTSEEEEECT
T ss_pred             cceEEECCChHHHHHHHHHCCCEEEEECC
Confidence            4599999999 999987 47888888754

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.31  E-value=2.2e-12  Score=108.75  Aligned_cols=99  Identities=15%  Similarity=0.085  Sum_probs=72.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC-
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      ..+++|++.++++.|+++ ++++++||.+...   ....|+.+|+. ++.++........||.+.   .....++..|. 
T Consensus       114 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~---~~~~l~~~~~~-f~~~~~~~~~~~~kp~~~---~~~~~~~~lgi~  185 (254)
T 3umg_A          114 VLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSL---LLDMAKNAGIP-WDVIIGSDINRKYKPDPQ---AYLRTAQVLGLH  185 (254)
T ss_dssp             SCCBCTTHHHHHHHHHHH-SEEEECSSSCHHH---HHHHHHHHTCC-CSCCCCHHHHTCCTTSHH---HHHHHHHHTTCC
T ss_pred             hCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHH---HHHHHHhCCCC-eeEEEEcCcCCCCCCCHH---HHHHHHHHcCCC
Confidence            346799999999999997 9999999987543   56677778876 444443333345666553   33445555665 


Q ss_pred             -cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 -RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 -~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                       +.+++|||+.+|+.++ .+|.+++.+.++
T Consensus       186 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~  215 (254)
T 3umg_A          186 PGEVMLAAAHNGDLEAAHATGLATAFILRP  215 (254)
T ss_dssp             GGGEEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred             hHHEEEEeCChHhHHHHHHCCCEEEEEecC
Confidence             4599999999999987 479999988643

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.30  E-value=1.1e-11  Score=103.48  Aligned_cols=96  Identities=9%  Similarity=0.032  Sum_probs=71.1

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++++.|+++ ++++++||.+..        |+..|+..++..++..+ ....||.+...   ...++..|
T Consensus       102 ~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~--------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~---~~~~~~~~  169 (230)
T 3vay_A          102 HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD--------VRRLGLADYFAFALCAEDLGIGKPDPAPF---LEALRRAK  169 (230)
T ss_dssp             TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC--------GGGSTTGGGCSEEEEHHHHTCCTTSHHHH---HHHHHHHT
T ss_pred             ccCccCcCHHHHHHHHHhC-CeEEEEECCchh--------hhhcCcHHHeeeeEEccccCCCCcCHHHH---HHHHHHhC
Confidence            4567999999999999998 999999998754        57788887766555543 34566666333   33444445


Q ss_pred             C--cEEEEEcCCc-cccCCCC-CCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQW-SSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~-sDl~ga~-~g~r~fklPnp  251 (256)
                      .  ..+++|||+. +|+.++. +|.+++.+..+
T Consensus       170 ~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~  202 (230)
T 3vay_A          170 VDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQ  202 (230)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT
T ss_pred             CCchheEEEeCChHHHHHHHHHCCCEEEEEcCC
Confidence            4  4599999997 9999874 78888887543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.30  E-value=9.9e-12  Score=103.79  Aligned_cols=98  Identities=12%  Similarity=0.084  Sum_probs=73.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++|++.++++.|+++ ++++++||.+..   .....|+..|+..++..+...+ ....||.+..   ....++..|.
T Consensus        98 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~---~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~---~~~~~~~~~~  170 (234)
T 3u26_A           98 YGELYPEVVEVLKSLKGK-YHVGMITDSDTE---QAMAFLDALGIKDLFDSITTSEEAGFFKPHPRI---FELALKKAGV  170 (234)
T ss_dssp             HCCBCTTHHHHHHHHTTT-SEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHH---HHHHHHHHTC
T ss_pred             hCCcCcCHHHHHHHHHhC-CcEEEEECCCHH---HHHHHHHHcCcHHHcceeEeccccCCCCcCHHH---HHHHHHHcCC
Confidence            467899999999999999 999999998754   3677888899987765555543 3446666533   2334444454


Q ss_pred             --cEEEEEcCCc-cccCCC-CCCCcEEEec
Q 025203          224 --RIWGVVGDQW-SSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga-~~g~r~fklP  249 (256)
                        +.+++|||+. +|+.++ .+|.+++.+.
T Consensus       171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~  200 (234)
T 3u26_A          171 KGEEAVYVGDNPVKDCGGSKNLGMTSILLD  200 (234)
T ss_dssp             CGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred             CchhEEEEcCCcHHHHHHHHHcCCEEEEEC
Confidence              4699999998 999987 5788888774

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.30  E-value=1.4e-12  Score=104.89  Aligned_cols=116  Identities=19%  Similarity=0.186  Sum_probs=78.0

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++++||+||||+++..++....                .......|++.++++.|+++|++++++||++...   +...
T Consensus         9 ~k~v~~DlDGTL~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~   69 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLYYTEHG----------------ETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAP---LITR   69 (162)
T ss_dssp             CCEEEECCTTTTSCSEEEEETTE----------------EEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHH---HHHH
T ss_pred             eeEEEEecCcceECCceeecCCC----------------ceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHH---HHHH
Confidence            57999999999998764321100                0012345888999999999999999999998644   6777


Q ss_pred             HHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          184 LIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       184 L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      ++++|+..++.    .    .||.+.   ..++.++..|.  +.+++|||+.+|+.++. +|.+++ +.|
T Consensus        70 l~~~gl~~~~~----~----~kp~~~---~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~-~~~  127 (162)
T 2p9j_A           70 LKELGVEEIYT----G----SYKKLE---IYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVA-VRN  127 (162)
T ss_dssp             HHHTTCCEEEE----C----C--CHH---HHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTT
T ss_pred             HHHcCCHhhcc----C----CCCCHH---HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE-ecC
Confidence            88889875331    1    334332   22334444454  46899999999999874 676644 444

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.29  E-value=4.4e-13  Score=111.52  Aligned_cols=127  Identities=11%  Similarity=0.026  Sum_probs=82.7

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhc---cCCC---------CCC---------HHHHHHH---HHh----cCCcchHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHG---FGGE---------RLN---------ASSWEAW---MKE----SKAPALEHTL  153 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~---~g~~---------~~~---------~~~~~~w---v~~----~~~~~~pg~~  153 (256)
                      .++++|+||+||||+|+.+.+....   +...         .+.         ++..+++   ...    ...+++||+.
T Consensus         2 ~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   81 (197)
T 1q92_A            2 GRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGAV   81 (197)
T ss_dssp             CCCEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCCSSCHHHHHHHHSTTHHHHHHHHHTSTTTTTTCCBCTTHH
T ss_pred             CCceEEEEeCCCCCccCcHHHHHHHHHHHhcCCCCCHHHhcCCcHHHHHHhcCHHHHHHHHHHHHhhhhhhcCCcCcCHH
Confidence            4678999999999999988764421   1110         111         0111112   111    2467899999


Q ss_pred             HHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHhcCCCC-cceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEE
Q 025203          154 NLFHEIKNR-GVKIFLVSSRRESLRSYTVDNLIHVGYHG-WASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVV  229 (256)
Q Consensus       154 ell~~L~~~-G~~i~ivTnR~~~~r~~T~~~L~~~G~~~-~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~i  229 (256)
                      ++++.|+++ |++++++||++...   ....|++.|+.. ++.                    ...++..|  ...+++|
T Consensus        82 e~L~~L~~~~g~~~~ivT~~~~~~---~~~~l~~~~l~~~~f~--------------------~~~~~~l~~~~~~~~~v  138 (197)
T 1q92_A           82 EAVKEMASLQNTDVFICTSPIKMF---KYCPYEKYAWVEKYFG--------------------PDFLEQIVLTRDKTVVS  138 (197)
T ss_dssp             HHHHHHHHSTTEEEEEEECCCSCC---SSHHHHHHHHHHHHHC--------------------GGGGGGEEECSCSTTSC
T ss_pred             HHHHHHHhcCCCeEEEEeCCccch---HHHHHHHhchHHHhch--------------------HHHHHHhccCCccEEEE
Confidence            999999999 99999999998754   234445555443 332                    01112222  2346789


Q ss_pred             cCCccc----cCCC--CCCCcEEEecCC
Q 025203          230 GDQWSS----FEGL--PKPKRTFKLPNS  251 (256)
Q Consensus       230 GD~~sD----l~ga--~~g~r~fklPnp  251 (256)
                      ||+..|    +.++  .+|.+++.+++|
T Consensus       139 gDs~~dD~~~~~~a~~~aG~~~i~~~~~  166 (197)
T 1q92_A          139 ADLLIDDRPDITGAEPTPSWEHVLFTAC  166 (197)
T ss_dssp             CSEEEESCSCCCCSCSSCSSEEEEECCT
T ss_pred             CcccccCCchhhhcccCCCceEEEecCc
Confidence            999999    8877  579999999875

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.28  E-value=7.7e-12  Score=103.38  Aligned_cols=96  Identities=14%  Similarity=0.065  Sum_probs=70.7

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC-
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY-  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~-  223 (256)
                      ..++|++.++++.|+++|++++++|+. . .   ....++..|+..++..++..+. ...||.+.   ..+..++..|. 
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~-~-~---~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~---~~~~~~~~lgi~  161 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS-K-N---GPFLLERMNLTGYFDAIADPAEVAASKPAPD---IFIAAAHAVGVA  161 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC-T-T---HHHHHHHTTCGGGCSEECCTTTSSSCTTSSH---HHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc-H-H---HHHHHHHcChHHHcceEeccccCCCCCCChH---HHHHHHHHcCCC
Confidence            467899999999999999999999998 2 2   4567778888776665555443 45666653   23444555564 


Q ss_pred             -cEEEEEcCCccccCCCC-CCCcEEEec
Q 025203          224 -RIWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       224 -~i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                       +.+++|||+.+|+.++. +|.+++...
T Consensus       162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~  189 (221)
T 2wf7_A          162 PSESIGLEDSQAGIQAIKDSGALPIGVG  189 (221)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             hhHeEEEeCCHHHHHHHHHCCCEEEEEC
Confidence             45999999999999874 687777663

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.28  E-value=8.2e-12  Score=108.66  Aligned_cols=101  Identities=8%  Similarity=-0.061  Sum_probs=73.6

Q ss_pred             cCCcchHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNR-GVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~-G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++||+.++++.|+++ |++++++||.....   ....|+..|+..++.++..++....||.+..   ....++..|
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~---~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~---~~~~~~~lg  184 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDM---AKKWFDILKIKRPEYFITANDVKQGKPHPEP---YLKGRNGLG  184 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHH---HHHHHHHHTCCCCSSEECGGGCSSCTTSSHH---HHHHHHHTT
T ss_pred             cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHH---HHHHHHHcCCCccCEEEEcccCCCCCCChHH---HHHHHHHcC
Confidence            3467899999999999999 99999999987543   5677777888744444433333456665532   334445555


Q ss_pred             C---------cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          223 Y---------RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       223 ~---------~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      .         +.+++|||+.+|+.++ .+|.+++.++.
T Consensus       185 i~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~  222 (275)
T 2qlt_A          185 FPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIAT  222 (275)
T ss_dssp             CCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred             CCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence            5         3599999999999987 47888888754

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.26  E-value=5.2e-12  Score=107.50  Aligned_cols=96  Identities=14%  Similarity=0.053  Sum_probs=65.0

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCC--------Cchhhh--h----
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDE--------YKKVQQ--Y----  210 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~--------~kp~~~--~----  210 (256)
                      ..+++||+.++++.|+++|++++++||.+...   +...|+  |+..++.++.......        .||++.  +    
T Consensus        75 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~---~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~  149 (236)
T 2fea_A           75 DAKIREGFREFVAFINEHEIPFYVISGGMDFF---VYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG  149 (236)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHH---HHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred             CCCCCccHHHHHHHHHhCCCeEEEEeCCcHHH---HHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence            47899999999999999999999999987533   455555  7755654444333222        566554  2    


Q ss_pred             --hHHHHHHHHhcCCcEEEEEcCCccccCCC-CCCCcEE
Q 025203          211 --KAQVRKRLVKEGYRIWGVVGDQWSSFEGL-PKPKRTF  246 (256)
Q Consensus       211 --K~~~r~~l~~~g~~i~~~iGD~~sDl~ga-~~g~r~f  246 (256)
                        |....+.+ ......+++|||+.+|+.++ .+|.+++
T Consensus       150 ~~K~~~~~~~-~~~~~~~~~vGDs~~Di~~a~~aG~~~~  187 (236)
T 2fea_A          150 CCKPSVIHEL-SEPNQYIIMIGDSVTDVEAAKLSDLCFA  187 (236)
T ss_dssp             SCHHHHHHHH-CCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             CcHHHHHHHH-hccCCeEEEEeCChHHHHHHHhCCeeee
Confidence              21233333 12345799999999999987 4676654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.25  E-value=5.6e-12  Score=106.78  Aligned_cols=97  Identities=16%  Similarity=0.090  Sum_probs=70.0

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--  223 (256)
                      ..++|++.++++.|++. ++++++||.+...   ....|+.+|+. ++.++........||.+...   ...++..|.  
T Consensus       119 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~---~~~~l~~~g~~-f~~~~~~~~~~~~kp~~~~~---~~~~~~lgi~~  190 (254)
T 3umc_A          119 LRPWPDTLAGMHALKAD-YWLAALSNGNTAL---MLDVARHAGLP-WDMLLCADLFGHYKPDPQVY---LGACRLLDLPP  190 (254)
T ss_dssp             CEECTTHHHHHHHHTTT-SEEEECCSSCHHH---HHHHHHHHTCC-CSEECCHHHHTCCTTSHHHH---HHHHHHHTCCG
T ss_pred             CCCCccHHHHHHHHHhc-CeEEEEeCCCHHH---HHHHHHHcCCC-cceEEeecccccCCCCHHHH---HHHHHHcCCCh
Confidence            46789999999999986 9999999987543   56677778886 44444333334566666333   334444454  


Q ss_pred             cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 ~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      +.+++|||+.+|+.++ .+|.+++.+..
T Consensus       191 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~  218 (254)
T 3umc_A          191 QEVMLCAAHNYDLKAARALGLKTAFIAR  218 (254)
T ss_dssp             GGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             HHEEEEcCchHhHHHHHHCCCeEEEEec
Confidence            4599999999999987 47999988863

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.25  E-value=3.6e-12  Score=102.56  Aligned_cols=117  Identities=8%  Similarity=0.019  Sum_probs=73.6

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++|+||+||||+++..++....-....|              ...++  .+++.|+++|++++++||++...   +..
T Consensus         3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~--------------~~~~~--~~l~~l~~~g~~~~i~T~~~~~~---~~~   63 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKF--------------NTSDS--AGIFWAHNKGIPVGILTGEKTEI---VRR   63 (164)
T ss_dssp             CCCEEEECSTTTTSSSEEEECSSSCEEEEE--------------EGGGH--HHHHHHHHTTCCEEEECSSCCHH---HHH
T ss_pred             cceEEEEcCCCceEcCcEEEcCCCcEEEEe--------------cCChH--HHHHHHHHCCCEEEEEeCCChHH---HHH
Confidence            468999999999999764432210000001              01122  27999999999999999997544   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      .++++|+..++..        .||.+..   .++.++..|  .+.+++|||+.+|+.++. +|. .+.+.|
T Consensus        64 ~~~~~gl~~~~~~--------~kpk~~~---~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~-~~~~~~  122 (164)
T 3e8m_A           64 RAEKLKVDYLFQG--------VVDKLSA---AEELCNELGINLEQVAYIGDDLNDAKLLKRVGI-AGVPAS  122 (164)
T ss_dssp             HHHHTTCSEEECS--------CSCHHHH---HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSE-EECCTT
T ss_pred             HHHHcCCCEeecc--------cCChHHH---HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC-eEEcCC
Confidence            7888898754322        1444432   223333334  456999999999999875 443 343433

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.22  E-value=8.4e-12  Score=116.06  Aligned_cols=101  Identities=8%  Similarity=-0.065  Sum_probs=69.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCC--C-cccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSR--R-ESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR--~-~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~  220 (256)
                      ..+++||+.++|+.|+++|++++++||.  . ...+......+.  |+..+++.++.+ +....||++....   ..+++
T Consensus        98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~i~~~~~~~~~KP~p~~~~---~~~~~  172 (555)
T 3i28_A           98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDFLIESCQVGMVKPEPQIYK---FLLDT  172 (555)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSEEEEHHHHTCCTTCHHHHH---HHHHH
T ss_pred             hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeEEEeccccCCCCCCHHHHH---HHHHH
Confidence            3688999999999999999999999997  2 223322333222  444454444444 4466788875443   33344


Q ss_pred             cCC--cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          221 EGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       221 ~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      .|.  +.+++|||+.+|+.++. +|.+++.+++
T Consensus       173 lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~  205 (555)
T 3i28_A          173 LKASPSEVVFLDDIGANLKPARDLGMVTILVQD  205 (555)
T ss_dssp             HTCCGGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred             cCCChhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence            454  45899999999999874 7889888764

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.21  E-value=7.5e-12  Score=116.57  Aligned_cols=125  Identities=15%  Similarity=0.070  Sum_probs=83.6

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc--------
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE--------  174 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~--------  174 (256)
                      ..++++||+||||+++...        ..|.. .+.+|     ..++||+.++|+.|+++|++++++||++.        
T Consensus        57 ~~k~v~fD~DGTL~~~~~~--------~~~~~-~~~~~-----~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~  122 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSG--------KVFPT-SPSDW-----RILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPA  122 (416)
T ss_dssp             CSSEEEECSBTTTEECSSC--------SSSCS-STTCC-----EESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCH
T ss_pred             CCeEEEEeCCCCccccCCC--------ccCCC-CHHHh-----hhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCH
Confidence            4689999999999976421        11110 01111     23789999999999999999999999762        


Q ss_pred             -ccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC------CcEEEEEcCCc--------------
Q 025203          175 -SLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG------YRIWGVVGDQW--------------  233 (256)
Q Consensus       175 -~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g------~~i~~~iGD~~--------------  233 (256)
                       ..+..+...|+.+|+. ++.++...+....||++...   ...++..|      ...+++|||+.              
T Consensus       123 ~~~~~~~~~~l~~lgl~-fd~i~~~~~~~~~KP~p~~~---~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d  198 (416)
T 3zvl_A          123 EVFKGKVEAVLEKLGVP-FQVLVATHAGLNRKPVSGMW---DHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKD  198 (416)
T ss_dssp             HHHHHHHHHHHHHHTSC-CEEEEECSSSTTSTTSSHHH---HHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCC
T ss_pred             HHHHHHHHHHHHHcCCC-EEEEEECCCCCCCCCCHHHH---HHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccC
Confidence             2223367778889986 44444444445678887443   33444443      34589999997              


Q ss_pred             ---cccCCCC-CCCcE
Q 025203          234 ---SSFEGLP-KPKRT  245 (256)
Q Consensus       234 ---sDl~ga~-~g~r~  245 (256)
                         +|+.+|. +|.++
T Consensus       199 ~s~~Di~~A~~aGi~f  214 (416)
T 3zvl_A          199 FSCADRLFALNVGLPF  214 (416)
T ss_dssp             SCCHHHHHHHHHTCCE
T ss_pred             CChhhHHHHHHcCCcc
Confidence               7888773 55553

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.21  E-value=7.3e-12  Score=106.45  Aligned_cols=117  Identities=15%  Similarity=0.172  Sum_probs=74.4

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++||||+||||+|+..++...+   ..+.           .....++.  +++.|+++|++++++||++...   +..
T Consensus        48 ~ik~viFDlDGTL~Ds~~~~~~~~---~~~~-----------~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~---~~~  108 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIYMGNQG---EELK-----------AFNVRDGY--GIRCLITSDIDVAIITGRRAKL---LED  108 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEEEETTS---CEEE-----------EEEHHHHH--HHHHHHHTTCEEEEECSSCCHH---HHH
T ss_pred             CCCEEEEeCCCCEECCHHHHhhhh---HHHH-----------HhccchHH--HHHHHHHCCCEEEEEeCCCHHH---HHH
Confidence            357999999999999875432211   0000           00111222  8999999999999999997654   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCCCCCcEEEec
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLPKPKRTFKLP  249 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~~g~r~fklP  249 (256)
                      .++.+|+..++..+      +.||.     .+++.++..|  .+.+++|||+.+|+.++....-.+.+.
T Consensus       109 ~l~~lgi~~~f~~~------k~K~~-----~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~  166 (211)
T 3ij5_A          109 RANTLGITHLYQGQ------SDKLV-----AYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA  166 (211)
T ss_dssp             HHHHHTCCEEECSC------SSHHH-----HHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT
T ss_pred             HHHHcCCchhhccc------CChHH-----HHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC
Confidence            88889997543221      22322     2333444445  456999999999999875333334443

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.20  E-value=4.4e-12  Score=105.38  Aligned_cols=108  Identities=19%  Similarity=0.232  Sum_probs=71.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++|+||+||||+++..++.....-...|              ...++.  +++.|+++|++++++||++...   +..
T Consensus        18 ~ik~vifD~DGTL~d~~~~~~~~~~~~~~~--------------~~~~~~--~l~~L~~~g~~~~i~T~~~~~~---~~~   78 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYFMEDGSEIKTF--------------NTLDGQ--GIKMLIASGVTTAIISGRKTAI---VER   78 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEEETTSCEEEEE--------------EHHHHH--HHHHHHHTTCEEEEECSSCCHH---HHH
T ss_pred             hCCEEEEcCCCCcCCccEeeccCCcEeeee--------------ccccHH--HHHHHHHCCCEEEEEECcChHH---HHH
Confidence            357999999999999865432211000001              111222  8999999999999999997644   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~  240 (256)
                      .++++|+..++..+      ..||     ..+++.++..|  .+.+++|||+.+|+.++.
T Consensus        79 ~~~~lgl~~~f~~~------~~K~-----~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~  127 (189)
T 3mn1_A           79 RAKSLGIEHLFQGR------EDKL-----VVLDKLLAELQLGYEQVAYLGDDLPDLPVIR  127 (189)
T ss_dssp             HHHHHTCSEEECSC------SCHH-----HHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred             HHHHcCCHHHhcCc------CChH-----HHHHHHHHHcCCChhHEEEECCCHHHHHHHH
Confidence            88888987543322      3344     22334444445  346899999999999874

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.19  E-value=1e-11  Score=102.09  Aligned_cols=113  Identities=12%  Similarity=0.111  Sum_probs=74.8

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..++|+||+||||+++..++...+                .......+...++++.|+++|++++++|||+...   +..
T Consensus         7 ~ik~i~~DlDGTL~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~---~~~   67 (180)
T 1k1e_A            7 NIKFVITDVDGVLTDGQLHYDANG----------------EAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPI---LRR   67 (180)
T ss_dssp             GCCEEEEECTTTTSCSEEEEETTE----------------EEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHH---HHH
T ss_pred             CCeEEEEeCCCCcCCCCeeeccCc----------------ceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHH---HHH
Confidence            357999999999999754321100                0001234678899999999999999999998654   567


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcE
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRT  245 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~  245 (256)
                      .++.+|+..++    ..    .||.+.   .+.+.++..|.  +.+++|||+.+|+.++. +|..+
T Consensus        68 ~~~~lgl~~~~----~~----~k~k~~---~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~  122 (180)
T 1k1e_A           68 RIADLGIKLFF----LG----KLEKET---ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSF  122 (180)
T ss_dssp             HHHHHTCCEEE----ES----CSCHHH---HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred             HHHHcCCceee----cC----CCCcHH---HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE
Confidence            77888887532    11    233332   22333344454  56899999999998874 45443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.19  E-value=6.6e-12  Score=105.38  Aligned_cols=118  Identities=15%  Similarity=0.171  Sum_probs=74.1

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++|+||+||||+++..++....-....|              .  +.....++.|+++|++++++||++...   +..
T Consensus        24 ~ik~vifD~DGtL~d~~~~~~~~~~~~~~~--------------~--~~d~~~l~~L~~~G~~~~ivT~~~~~~---~~~   84 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYMGNQGEELKTF--------------H--TRDGYGVKALMNAGIEIAIITGRRSQI---VEN   84 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEECTTSCEECCC--------------C--TTHHHHHHHHHHTTCEEEEECSSCCHH---HHH
T ss_pred             CCCEEEEcCCCCcCCCcEEEccCchhhhee--------------e--cccHHHHHHHHHCCCEEEEEECcCHHH---HHH
Confidence            467999999999999765432211000011              1  112234899999999999999997644   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEecC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      .++++|+..++.    .    .||.+   ..+++.++..|.  ..+++|||+.+|+.++....-.+.+.|
T Consensus        85 ~l~~lgi~~~~~----~----~k~k~---~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~n  143 (195)
T 3n07_A           85 RMKALGISLIYQ----G----QDDKV---QAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVAD  143 (195)
T ss_dssp             HHHHTTCCEEEC----S----CSSHH---HHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTT
T ss_pred             HHHHcCCcEEee----C----CCCcH---HHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECC
Confidence            888899875321    1    12323   223344444454  469999999999998753334444444

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.18  E-value=2e-11  Score=103.28  Aligned_cols=96  Identities=14%  Similarity=0.052  Sum_probs=65.8

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..+++||+.++|+.|+++| +++++||++...   +...|+++|+..++..+...  ...||  .+.....+   .....
T Consensus        94 ~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~---~~~~l~~~gl~~~f~~~~~~--~~~K~--~~~~~~~~---~~~~~  162 (231)
T 2p11_A           94 ASRVYPGALNALRHLGARG-PTVILSDGDVVF---QPRKIARSGLWDEVEGRVLI--YIHKE--LMLDQVME---CYPAR  162 (231)
T ss_dssp             GGGBCTTHHHHHHHHHTTS-CEEEEEECCSSH---HHHHHHHTTHHHHTTTCEEE--ESSGG--GCHHHHHH---HSCCS
T ss_pred             hCCcCccHHHHHHHHHhCC-CEEEEeCCCHHH---HHHHHHHcCcHHhcCeeEEe--cCChH--HHHHHHHh---cCCCc
Confidence            3578999999999999999 999999998654   57778888876553221111  12332  22222222   23456


Q ss_pred             EEEEEcCCcc---ccCCC-CCCCcEEEecCC
Q 025203          225 IWGVVGDQWS---SFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       225 i~~~iGD~~s---Dl~ga-~~g~r~fklPnp  251 (256)
                      .+++|||+.+   |+.++ .+|.+++.++..
T Consensus       163 ~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g  193 (231)
T 2p11_A          163 HYVMVDDKLRILAAMKKAWGARLTTVFPRQG  193 (231)
T ss_dssp             EEEEECSCHHHHHHHHHHHGGGEEEEEECCS
T ss_pred             eEEEEcCccchhhhhHHHHHcCCeEEEeCCC
Confidence            7999999999   87766 478888877643

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.18  E-value=1.6e-11  Score=100.88  Aligned_cols=117  Identities=11%  Similarity=0.151  Sum_probs=72.5

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++|+||+||||+++..++.........|.              ..++.  +++.|+++|++++++||++...   +..
T Consensus        11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~--------------~~~~~--~l~~L~~~g~~~~i~T~~~~~~---~~~   71 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVH--------------RGDGL--GIAALRKSGLTMLILSTEQNPV---VAA   71 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCEECTTCCEEEEEE--------------HHHHH--HHHHHHHTTCEEEEEESSCCHH---HHH
T ss_pred             cCCEEEEeCCCCcCcCCEeecCCccHhHhcc--------------cccHH--HHHHHHHCCCeEEEEECcChHH---HHH
Confidence            4679999999999996544321100000010              11222  8999999999999999998654   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCCCCCcEEEecC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      .++.+|+. +    +...    ||.+   ..+++.++..|  ...+++|||+.+|+.++....-.+.+.|
T Consensus        72 ~~~~lgi~-~----~~~~----~~k~---~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~  129 (176)
T 3mmz_A           72 RARKLKIP-V----LHGI----DRKD---LALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVAS  129 (176)
T ss_dssp             HHHHHTCC-E----EESC----SCHH---HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred             HHHHcCCe-e----EeCC----CChH---HHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCC
Confidence            78888986 2    2221    2322   22334444445  3458999999999998753224444444

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.18  E-value=1e-10  Score=100.09  Aligned_cols=101  Identities=13%  Similarity=0.057  Sum_probs=69.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...++|++.++++.|+++|++++++||.+...   ....++..|+..++ ..+...+ ....||.+..   ....++..|
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~---~~~~~~~lg  174 (267)
T 1swv_A          101 YASPINGVKEVIASLRERGIKIGSTTGYTREM---MDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWM---CYKNAMELG  174 (267)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHH---HHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHH---HHHHHHHHT
T ss_pred             ccccCccHHHHHHHHHHcCCeEEEEcCCCHHH---HHHHHHHcCCcccChHheecCCccCCCCCCHHH---HHHHHHHhC
Confidence            46788999999999999999999999987544   34445555554442 3344333 2345555532   334444445


Q ss_pred             C---cEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          223 Y---RIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       223 ~---~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .   +.+++|||+.+|+.++. +|.+++.+.+.
T Consensus       175 i~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~  207 (267)
T 1swv_A          175 VYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG  207 (267)
T ss_dssp             CCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred             CCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC
Confidence            4   45999999999999874 78888877543

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.17  E-value=8e-11  Score=96.51  Aligned_cols=97  Identities=16%  Similarity=0.023  Sum_probs=60.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce-EEEecCC-CCCc-----hhhhhh-HHHHH
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS-LELRGLE-DEYK-----KVQQYK-AQVRK  216 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~-lilr~~~-~~~k-----p~~~~K-~~~r~  216 (256)
                      ..++.|++.++++.|+++|++++++|||+...   +...++.+|+..++. .+...++ ...+     +....| ..+.+
T Consensus        74 ~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~  150 (211)
T 1l7m_A           74 RITPTEGAEETIKELKNRGYVVAVVSGGFDIA---VNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEK  150 (211)
T ss_dssp             TCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHH---HHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHH
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHH
Confidence            45677999999999999999999999987543   445667778764432 1111110 0000     000112 23444


Q ss_pred             HHHhcCCc--EEEEEcCCccccCCCC-CCCc
Q 025203          217 RLVKEGYR--IWGVVGDQWSSFEGLP-KPKR  244 (256)
Q Consensus       217 ~l~~~g~~--i~~~iGD~~sDl~ga~-~g~r  244 (256)
                      .++..|..  .+++|||+.+|+.++. +|..
T Consensus       151 ~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~  181 (211)
T 1l7m_A          151 IAKIEGINLEDTVAVGDGANDISMFKKAGLK  181 (211)
T ss_dssp             HHHHHTCCGGGEEEEECSGGGHHHHHHCSEE
T ss_pred             HHHHcCCCHHHEEEEecChhHHHHHHHCCCE
Confidence            45555644  5999999999998864 5654

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.13  E-value=3.3e-11  Score=98.12  Aligned_cols=96  Identities=14%  Similarity=0.078  Sum_probs=62.7

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCC--CCchhhhhhHHHHHHHHhc
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLED--EYKKVQQYKAQVRKRLVKE  221 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~--~~kp~~~~K~~~r~~l~~~  221 (256)
                      ...++.|++.++++.|+++|++++++||.+...   .... +.+|+..+...+...++.  ..+|.+..|....+   ..
T Consensus        76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~---~l  148 (201)
T 4ap9_A           76 EKVNVSPEARELVETLREKGFKVVLISGSFEEV---LEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLK---RF  148 (201)
T ss_dssp             GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTT---SGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHG---GG
T ss_pred             HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHH---HHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHH---hc
Confidence            345889999999999999999999999987654   2333 566776553333222211  12233333433333   33


Q ss_pred             CCcEEEEEcCCccccCCCC-CCCcEE
Q 025203          222 GYRIWGVVGDQWSSFEGLP-KPKRTF  246 (256)
Q Consensus       222 g~~i~~~iGD~~sDl~ga~-~g~r~f  246 (256)
                      ....+++|||+.+|+.++. +|..+.
T Consensus       149 ~~~~~i~iGD~~~Di~~~~~ag~~v~  174 (201)
T 4ap9_A          149 RDGFILAMGDGYADAKMFERADMGIA  174 (201)
T ss_dssp             TTSCEEEEECTTCCHHHHHHCSEEEE
T ss_pred             CcCcEEEEeCCHHHHHHHHhCCceEE
Confidence            5677999999999999874 666543

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.12  E-value=1.2e-11  Score=103.16  Aligned_cols=117  Identities=11%  Similarity=0.156  Sum_probs=73.7

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++++||+||||+++..++....-....              ....++.  .++.|+++|++++++||++...   +..
T Consensus        18 ~ik~vifD~DGtL~~~~~~~~~~~~~~~~--------------~~~~d~~--~l~~L~~~g~~~~ivTn~~~~~---~~~   78 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHIDNHGNELKS--------------FHVQDGM--GLKLLMAAGIQVAIITTAQNAV---VDH   78 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEECTTCCEECC--------------BCHHHHH--HHHHHHHTTCEEEEECSCCSHH---HHH
T ss_pred             cCCEEEEeCCCCCCCCceeecCCchhhhh--------------ccccChH--HHHHHHHCCCeEEEEeCcChHH---HHH
Confidence            46899999999999976543221100000              1122333  5899999999999999997543   677


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      .++.+|+..++..+        ||.+.   ..++.++..|.  +.+++|||+.+|+.++. +|..+ .+.|
T Consensus        79 ~l~~lgl~~~~~~~--------kpk~~---~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~-~~~~  137 (191)
T 3n1u_A           79 RMEQLGITHYYKGQ--------VDKRS---AYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGV-AVSN  137 (191)
T ss_dssp             HHHHHTCCEEECSC--------SSCHH---HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTT
T ss_pred             HHHHcCCccceeCC--------CChHH---HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEE-EeCC
Confidence            88888987532211        23332   22333344443  46899999999999874 45443 4444

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.11  E-value=2e-10  Score=100.00  Aligned_cols=96  Identities=15%  Similarity=0.001  Sum_probs=64.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhc--C---------CCCcceEEEecCCCCCchhhhhhHH
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHV--G---------YHGWASLELRGLEDEYKKVQQYKAQ  213 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~--G---------~~~~~~lilr~~~~~~kp~~~~K~~  213 (256)
                      ..+++||+.++|+.    |++++++||.+..   .+...|+..  |         +..+..-++.......||++.... 
T Consensus       123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~~---~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~-  194 (253)
T 2g80_A          123 KAPVYADAIDFIKR----KKRVFIYSSGSVK---AQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYA-  194 (253)
T ss_dssp             CBCCCHHHHHHHHH----CSCEEEECSSCHH---HHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHH-
T ss_pred             cCCCCCCHHHHHHc----CCEEEEEeCCCHH---HHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHH-
Confidence            35789999999988    9999999999754   356666665  4         332222222211112478774433 


Q ss_pred             HHHHHHhcCC--cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          214 VRKRLVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       214 ~r~~l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        ..+++.|.  ..+++|||+..|+.+| .+|.+++.+..
T Consensus       195 --~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          195 --NILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASR  232 (253)
T ss_dssp             --HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECC
T ss_pred             --HHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcC
Confidence              33444454  4599999999999987 58999998744

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.09  E-value=7e-11  Score=98.26  Aligned_cols=99  Identities=11%  Similarity=0.035  Sum_probs=69.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEEEecCC-CCC--chhhhhhHHHHHHHHh
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLELRGLE-DEY--KKVQQYKAQVRKRLVK  220 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~lilr~~~-~~~--kp~~~~K~~~r~~l~~  220 (256)
                      ..+++|++.++++.++.   +++++||.+...   ....|+++|+..++ ..+...+. ...  ||.+.   ..++.++.
T Consensus        85 ~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~---~~~~~~~~  155 (229)
T 2fdr_A           85 DVKIIDGVKFALSRLTT---PRCICSNSSSHR---LDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPD---IFLHGAAQ  155 (229)
T ss_dssp             HCCBCTTHHHHHHHCCS---CEEEEESSCHHH---HHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSH---HHHHHHHH
T ss_pred             CCccCcCHHHHHHHhCC---CEEEEECCChhH---HHHHHHhCChHHhccceEEeccccccCCCCcCHH---HHHHHHHH
Confidence            45778999999888764   899999987543   56777888887765 55554433 444  55553   23344444


Q ss_pred             cCC--cEEEEEcCCccccCCCC-CCCcEEEecCCC
Q 025203          221 EGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       221 ~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPnp~  252 (256)
                      .|.  +.+++|||+.+|+.++. +|.+++.+.++.
T Consensus       156 l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~  190 (229)
T 2fdr_A          156 FGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGAS  190 (229)
T ss_dssp             HTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred             cCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCC
Confidence            454  45899999999999874 788888886643

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.09  E-value=2.1e-10  Score=106.17  Aligned_cols=137  Identities=18%  Similarity=0.064  Sum_probs=86.4

Q ss_pred             CCCcEEEEecCCCccCChHHHHHh-ccC--------------C-CC--------------CCHHHHHHHHHhcCCcchHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKH-GFG--------------G-ER--------------LNASSWEAWMKESKAPALEH  151 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~-~~g--------------~-~~--------------~~~~~~~~wv~~~~~~~~pg  151 (256)
                      ..+++|+||+||||+++....... .+|              + ..              .+.+.+.++.  ...+++||
T Consensus       183 ~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~pg  260 (415)
T 3p96_A          183 RAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVA--GQLELMPG  260 (415)
T ss_dssp             TCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHH--HHCCBCTT
T ss_pred             cCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHH--HhCccCcc
Confidence            457899999999999976422111 111              0 01              1112233332  24688999


Q ss_pred             HHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE-------e----cCCCCCchhhhhhHHHHHHHHh
Q 025203          152 TLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL-------R----GLEDEYKKVQQYKAQVRKRLVK  220 (256)
Q Consensus       152 ~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil-------r----~~~~~~kp~~~~K~~~r~~l~~  220 (256)
                      +.++++.|+++|++++++||....   .+...++.+|+..++.-.+       .    ++....||.+..   .++.+++
T Consensus       261 ~~e~l~~Lk~~G~~~~ivS~~~~~---~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~---~~~~~~~  334 (415)
T 3p96_A          261 ARTTLRTLRRLGYACGVVSGGFRR---IIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATA---LREFAQR  334 (415)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH---HHHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEcCCcHH---HHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHH---HHHHHHH
Confidence            999999999999999999997643   4677888899976532111       1    111223444422   3334444


Q ss_pred             cCC--cEEEEEcCCccccCCCC-CCCcEE
Q 025203          221 EGY--RIWGVVGDQWSSFEGLP-KPKRTF  246 (256)
Q Consensus       221 ~g~--~i~~~iGD~~sDl~ga~-~g~r~f  246 (256)
                      .|.  ..+++|||+.+|+.++. +|..+.
T Consensus       335 ~gi~~~~~i~vGD~~~Di~~a~~aG~~va  363 (415)
T 3p96_A          335 AGVPMAQTVAVGDGANDIDMLAAAGLGIA  363 (415)
T ss_dssp             HTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             cCcChhhEEEEECCHHHHHHHHHCCCeEE
Confidence            454  45999999999999874 565444

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.09  E-value=1.2e-10  Score=100.26  Aligned_cols=88  Identities=15%  Similarity=0.164  Sum_probs=61.2

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEE
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIW  226 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~  226 (256)
                      +++||+.++++.|+++|++++++||++...   +...++..|+..++..++..+          |....+.+.+ .+ .+
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~---~~~~~~~~gl~~~f~~~~~~~----------k~~~~k~~~~-~~-~~  208 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFV---AKWVAEELGLDDYFAEVLPHE----------KAEKVKEVQQ-KY-VT  208 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSEEECSCCGGG----------HHHHHHHHHT-TS-CE
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHcCChhHhHhcCHHH----------HHHHHHHHHh-cC-CE
Confidence            688999999999999999999999997543   677788889876654333221          2222233322 23 46


Q ss_pred             EEEcCCccccCCCC-CCCcEEEecC
Q 025203          227 GVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       227 ~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      ++|||+.+|+.++. +| -.+...|
T Consensus       209 ~~vGD~~nDi~~~~~Ag-~~va~~~  232 (280)
T 3skx_A          209 AMVGDGVNDAPALAQAD-VGIAIGA  232 (280)
T ss_dssp             EEEECTTTTHHHHHHSS-EEEECSC
T ss_pred             EEEeCCchhHHHHHhCC-ceEEecC
Confidence            89999999999874 44 3444443

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.08  E-value=6.2e-11  Score=98.10  Aligned_cols=113  Identities=15%  Similarity=0.130  Sum_probs=71.5

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +.++++||+||||+++..++.........|                -..-..+++.|+++|++++++||++...   +..
T Consensus        25 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~----------------~~~d~~~l~~L~~~g~~v~ivT~~~~~~---~~~   85 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLIYMGNNGEELKAF----------------NVRDGYGIRCALTSDIEVAIITGRKAKL---VED   85 (188)
T ss_dssp             TCSEEEECCCCCCBCSEEEEETTSCEEEEE----------------EHHHHHHHHHHHTTTCEEEEECSSCCHH---HHH
T ss_pred             cCCEEEEeCCCCcCCCCEEecCCCcEEEEe----------------ecccHHHHHHHHHCCCeEEEEeCCChHH---HHH
Confidence            468999999999999765432110000000                0111238999999999999999998654   567


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcE
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRT  245 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~  245 (256)
                      .++++|+..++    ..    .||.+.   ..++.++..|.  ..+++|||+.+|+.++. +|..+
T Consensus        86 ~l~~lgl~~~~----~~----~kpk~~---~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~  140 (188)
T 2r8e_A           86 RCATLGITHLY----QG----QSNKLI---AFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSV  140 (188)
T ss_dssp             HHHHHTCCEEE----CS----CSCSHH---HHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEE
T ss_pred             HHHHcCCceee----cC----CCCCHH---HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEE
Confidence            77888887432    11    233332   23333444453  46899999999999875 45443

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.02  E-value=1e-09  Score=93.41  Aligned_cols=60  Identities=13%  Similarity=0.227  Sum_probs=45.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..++|+||+||||+++.                           ..+|++.+.++.++++|+++.++||+.........+
T Consensus         6 ~ik~i~fDlDGTLld~~---------------------------~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~   58 (259)
T 2ho4_A            6 ALKAVLVDLNGTLHIED---------------------------AAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLE   58 (259)
T ss_dssp             CCCEEEEESSSSSCC------------------------------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHH
T ss_pred             hCCEEEEeCcCcEEeCC---------------------------EeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHH
Confidence            46899999999999953                           234677888999999999999999887655555555


Q ss_pred             HHHhcCC
Q 025203          183 NLIHVGY  189 (256)
Q Consensus       183 ~L~~~G~  189 (256)
                      .|+..|+
T Consensus        59 ~l~~~g~   65 (259)
T 2ho4_A           59 RLKKLEF   65 (259)
T ss_dssp             HHHHTTC
T ss_pred             HHHHcCC
Confidence            5555554

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.97  E-value=5.9e-10  Score=98.03  Aligned_cols=90  Identities=14%  Similarity=0.110  Sum_probs=63.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      ..+++||+.++++.|+++|++++++||++...   +...++.+|+..++..+.        |  ..|....+.+...  .
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~---~~~~l~~~gl~~~f~~i~--------~--~~K~~~~~~l~~~--~  225 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRS---AEAISRELNLDLVIAEVL--------P--HQKSEEVKKLQAK--E  225 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSEEECSCC--------T--TCHHHHHHHHTTT--C
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHHhCCceeeeecC--------h--HHHHHHHHHHhcC--C
Confidence            35789999999999999999999999997543   567778889876543222        1  1223333344333  6


Q ss_pred             EEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          225 IWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       225 i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                      .+++|||+.+|+.++. +|.. +.++|
T Consensus       226 ~~~~vGDs~~Di~~a~~ag~~-v~~~~  251 (287)
T 3a1c_A          226 VVAFVGDGINDAPALAQADLG-IAVGS  251 (287)
T ss_dssp             CEEEEECTTTCHHHHHHSSEE-EEECC
T ss_pred             eEEEEECCHHHHHHHHHCCee-EEeCC
Confidence            7999999999999874 5654 44444

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.97  E-value=4.8e-10  Score=91.96  Aligned_cols=117  Identities=15%  Similarity=0.124  Sum_probs=71.4

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .+.+.++||+||||+++.-++...+--...|+              ..++  ..++.|+++|++++++||+ +.    +.
T Consensus         7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~--------------~~D~--~~L~~Lk~~Gi~~~I~Tg~-~~----~~   65 (168)
T 3ewi_A            7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYD--------------VKDA--IGISLLKKSGIEVRLISER-AC----SK   65 (168)
T ss_dssp             CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEE--------------HHHH--HHHHHHHHTTCEEEEECSS-CC----CH
T ss_pred             hcCcEEEEeCccceECCcEEEcCCCCEEEEEe--------------cCcH--HHHHHHHHCCCEEEEEeCc-HH----HH
Confidence            35789999999999997643221100000011              1122  2689999999999999999 33    45


Q ss_pred             HHHH--hcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEecCC
Q 025203          182 DNLI--HVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       182 ~~L~--~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklPnp  251 (256)
                      ..++  .+|+. +   +. +  ...|+     ..+++.++..|.  +.+++|||+.+|+.++....-.+.++|.
T Consensus        66 ~~l~~l~lgi~-~---~~-g--~~~K~-----~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na  127 (168)
T 3ewi_A           66 QTLSALKLDCK-T---EV-S--VSDKL-----ATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADA  127 (168)
T ss_dssp             HHHHTTCCCCC-E---EC-S--CSCHH-----HHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTC
T ss_pred             HHHHHhCCCcE-E---EE-C--CCChH-----HHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCCh
Confidence            6677  55664 2   22 2  12232     234444555554  4699999999999987532344566664

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=98.96  E-value=1.2e-09  Score=94.19  Aligned_cols=61  Identities=18%  Similarity=0.293  Sum_probs=46.9

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      ...++|+||+||||+++.                           ...|++.+.+++|+++|++++++|||+...+....
T Consensus        15 ~~~~~v~~DlDGTLl~~~---------------------------~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~   67 (271)
T 1vjr_A           15 DKIELFILDMDGTFYLDD---------------------------SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYV   67 (271)
T ss_dssp             GGCCEEEECCBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHH
T ss_pred             cCCCEEEEcCcCcEEeCC---------------------------EECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHH
Confidence            347899999999999952                           24588899999999999999999977655444455


Q ss_pred             HHHHhcCC
Q 025203          182 DNLIHVGY  189 (256)
Q Consensus       182 ~~L~~~G~  189 (256)
                      +.++..|+
T Consensus        68 ~~~~~lg~   75 (271)
T 1vjr_A           68 RKLRNMGV   75 (271)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHcCC
Confidence            55555554

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=98.90  E-value=3.9e-09  Score=90.69  Aligned_cols=61  Identities=10%  Similarity=0.256  Sum_probs=48.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..++|+||+||||+++.                           ..++++.+.++.++++|+++.++|||....+....+
T Consensus         4 ~~k~v~fDlDGTL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~   56 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYLGK---------------------------EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQ   56 (264)
T ss_dssp             SCCEEEECCBTTTEETT---------------------------EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHH
T ss_pred             cCCEEEEeCCCeEEeCC---------------------------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH
Confidence            36899999999999953                           345889999999999999999999998766555555


Q ss_pred             HHHh-cCCC
Q 025203          183 NLIH-VGYH  190 (256)
Q Consensus       183 ~L~~-~G~~  190 (256)
                      .|.. +|++
T Consensus        57 ~l~~~~g~~   65 (264)
T 1yv9_A           57 RLANEFDIH   65 (264)
T ss_dssp             HHHHHSCCC
T ss_pred             HHHHhcCCC
Confidence            5544 5543

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.88  E-value=2.5e-09  Score=85.51  Aligned_cols=66  Identities=12%  Similarity=0.100  Sum_probs=54.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+|||||||+++..       +               .-..+.|++.+.++.|+++|++++++|||+......+.++
T Consensus         3 ~k~i~~DlDGTL~~~~~-------~---------------~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~   60 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRY-------P---------------RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEW   60 (142)
T ss_dssp             CCEEEECCBTTTBCSCT-------T---------------SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHH
T ss_pred             CeEEEEECcCCCCCCCC-------c---------------cccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHH
Confidence            57999999999999530       0               0124568999999999999999999999997777789999


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      |+..|++.
T Consensus        61 l~~~gi~~   68 (142)
T 2obb_A           61 CRARGLEF   68 (142)
T ss_dssp             HHTTTCCC
T ss_pred             HHHcCCCe
Confidence            99999973

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.87  E-value=2.6e-09  Score=95.78  Aligned_cols=97  Identities=11%  Similarity=-0.031  Sum_probs=65.8

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE-----------ecCCCCCchhhhhhH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL-----------RGLEDEYKKVQQYKA  212 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil-----------r~~~~~~kp~~~~K~  212 (256)
                      ...+++||+.++++.|+++|++++++||....   .+...++++|+..++.-.+           .++....||.+..  
T Consensus       175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~---~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~--  249 (335)
T 3n28_A          175 ETLPLMPELPELVATLHAFGWKVAIASGGFTY---FSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADI--  249 (335)
T ss_dssp             TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHH---HHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHH--
T ss_pred             HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHH--
Confidence            35678999999999999999999999998643   3566677889875533211           1122233444432  


Q ss_pred             HHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcEE
Q 025203          213 QVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTF  246 (256)
Q Consensus       213 ~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~f  246 (256)
                       ..+.++..|.  ..+++|||+.+|+.++. +|..+.
T Consensus       250 -~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va  285 (335)
T 3n28_A          250 -LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVA  285 (335)
T ss_dssp             -HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred             -HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence             3333444454  46999999999999874 565444

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.85  E-value=7.1e-09  Score=88.36  Aligned_cols=59  Identities=17%  Similarity=0.206  Sum_probs=46.6

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.++||+||||+++.                          ...-|.+.+.+++|+++|++++++|||+...   ....
T Consensus         5 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~---~~~~   55 (227)
T 1l6r_A            5 IRLAAIDVDGNLTDRD--------------------------RLISTKAIESIRSAEKKGLTVSLLSGNVIPV---VYAL   55 (227)
T ss_dssp             CCEEEEEHHHHSBCTT--------------------------SCBCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHH
T ss_pred             eEEEEEECCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCcHH---HHHH
Confidence            4799999999999853                          2234789999999999999999999998544   4555


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|++.
T Consensus        56 ~~~l~~~~   63 (227)
T 1l6r_A           56 KIFLGING   63 (227)
T ss_dssp             HHHHTCCS
T ss_pred             HHHhCCCC
Confidence            56667654

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.78  E-value=2.9e-08  Score=84.29  Aligned_cols=63  Identities=14%  Similarity=0.283  Sum_probs=42.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||+++..                       ....+.++..+.++.++++|+++.++|++.........+.
T Consensus        12 ~k~i~fDlDGTLl~s~~-----------------------~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~   68 (271)
T 2x4d_A           12 VRGVLLDISGVLYDSGA-----------------------GGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQ   68 (271)
T ss_dssp             CCEEEECCBTTTEECCT-----------------------TTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHH
T ss_pred             CCEEEEeCCCeEEecCC-----------------------CCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHH
Confidence            57999999999999530                       0123557778888899999999999995443333334444


Q ss_pred             HHhcCC
Q 025203          184 LIHVGY  189 (256)
Q Consensus       184 L~~~G~  189 (256)
                      +...|+
T Consensus        69 l~~~g~   74 (271)
T 2x4d_A           69 LQRLGF   74 (271)
T ss_dssp             HHHTTC
T ss_pred             HHHCCC
Confidence            444443

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.76  E-value=4.3e-08  Score=76.27  Aligned_cols=66  Identities=15%  Similarity=0.134  Sum_probs=51.0

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc--------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL--------  176 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~--------  176 (256)
                      ++|+|||||||+++...         .|           ....+.|++.+.++.|+++|++++++|||+...        
T Consensus         2 k~i~~DlDGTL~~~~~~---------~~-----------~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~   61 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTS---------DY-----------RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKI   61 (126)
T ss_dssp             CEEEECSTTTTBCCCCS---------CG-----------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHH
T ss_pred             CEEEEecCCCCCCCCCC---------cc-----------ccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhcccccccc
Confidence            68999999999986421         01           013566899999999999999999999998643        


Q ss_pred             ----HHHHHHHHHhcCCC
Q 025203          177 ----RSYTVDNLIHVGYH  190 (256)
Q Consensus       177 ----r~~T~~~L~~~G~~  190 (256)
                          ...+.+.+++.|++
T Consensus        62 ~~~~~~~i~~~~~~~~~~   79 (126)
T 1xpj_A           62 NIHTLPIITEWLDKHQVP   79 (126)
T ss_dssp             HHHTHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHHHcCCC
Confidence                34577788887775

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=98.74  E-value=3.2e-09  Score=98.00  Aligned_cols=100  Identities=12%  Similarity=0.042  Sum_probs=75.5

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce--EEEecCCC------------CCchhhhhh
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS--LELRGLED------------EYKKVQQYK  211 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~--lilr~~~~------------~~kp~~~~K  211 (256)
                      .+++||+.++|+.|+++|++++++||++..   .+...|+++|+..++.  .++.+++.            .+||++...
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~---~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~  290 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYT---ETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY  290 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHH---HHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHH
Confidence            478999999999999999999999999754   3677788889987765  55554432            267877443


Q ss_pred             HHHHHHHHhcC----------------CcEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          212 AQVRKRLVKEG----------------YRIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       212 ~~~r~~l~~~g----------------~~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .   ..++..|                ...+++|||+.+|+.+| .+|.+++.++..
T Consensus       291 ~---~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g  344 (384)
T 1qyi_A          291 I---AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG  344 (384)
T ss_dssp             H---HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred             H---HHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            2   2333333                34599999999999987 479999988764

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.74  E-value=2.3e-08  Score=86.02  Aligned_cols=60  Identities=22%  Similarity=0.396  Sum_probs=52.4

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+|||||||++..                           ..+|++.+.+++|+++|++++++|||+...+....+.
T Consensus         8 ~kli~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~   60 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSV---------------------------TPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLER   60 (268)
T ss_dssp             CSEEEEECBTTTEETT---------------------------EECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHH
T ss_pred             CCEEEEcCcCcEECCC---------------------------EeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHH
Confidence            6899999999999842                           2568999999999999999999999887777777888


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      |+.+|++
T Consensus        61 l~~lg~~   67 (268)
T 3qgm_A           61 LRSFGLE   67 (268)
T ss_dssp             HHHTTCC
T ss_pred             HHHCCCC
Confidence            8888986

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.72  E-value=5.4e-09  Score=87.75  Aligned_cols=130  Identities=13%  Similarity=0.036  Sum_probs=80.6

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCC-HHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLN-ASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYT  180 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T  180 (256)
                      .+++.+|||+||||+.+....   ..+ ..|. +-..+.-...-.....||+.+||++|++. ++++++|+.+...   +
T Consensus        26 ~~k~~LVLDLD~TLvhs~~~~---~~~-~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~---a   97 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSSFKP---ISN-ADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKY---A   97 (195)
T ss_dssp             TTCCEEEECCBTTTEEEESSC---CTT-CSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH---H
T ss_pred             CCCeEEEEccccceEcccccC---CCC-ccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHH---H
Confidence            568899999999999975110   000 0000 00000000001246789999999999998 9999999998655   6


Q ss_pred             HHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCCc--EEEEEcCCccccCCCC-CCCcE
Q 025203          181 VDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGYR--IWGVVGDQWSSFEGLP-KPKRT  245 (256)
Q Consensus       181 ~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~~--i~~~iGD~~sDl~ga~-~g~r~  245 (256)
                      ...|+.+|...++..++..++ ...| .. |    .+.+...|..  -+++|||+..++..+. +|..+
T Consensus        98 ~~vl~~ld~~~~f~~~l~rd~~~~~k-~~-~----lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i  160 (195)
T 2hhl_A           98 DPVADLLDRWGVFRARLFRESCVFHR-GN-Y----VKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV  160 (195)
T ss_dssp             HHHHHHHCCSSCEEEEECGGGCEEET-TE-E----ECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred             HHHHHHhCCcccEEEEEEcccceecC-Cc-e----eeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence            667777787776655554433 2222 11 2    2344455654  4999999999998875 44443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.69  E-value=4e-08  Score=85.78  Aligned_cols=102  Identities=12%  Similarity=-0.086  Sum_probs=63.3

Q ss_pred             cchHHHHHHHHHHHHc-CCeEEEEeCCCcc------------------cHHHHHHHHHhcCCCCcceE-----------E
Q 025203          147 PALEHTLNLFHEIKNR-GVKIFLVSSRRES------------------LRSYTVDNLIHVGYHGWASL-----------E  196 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~-G~~i~ivTnR~~~------------------~r~~T~~~L~~~G~~~~~~l-----------i  196 (256)
                      .+.+++.++++.++++ |+++.+.|+....                  ....+.+.|++.|+..+...           .
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            6789999999999998 9999999976211                  23446677778887533211           1


Q ss_pred             EecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEecCC
Q 025203          197 LRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       197 lr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklPnp  251 (256)
                      ........++.+   ..++..++..|.  ..+++|||+.+|+.++......+.+-|.
T Consensus       202 ~~~~~~~~~~k~---~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~  255 (289)
T 3gyg_A          202 DVDFIPIGTGKN---EIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNA  255 (289)
T ss_dssp             EEEEEESCCSHH---HHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTC
T ss_pred             EEEEEeCCCCHH---HHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCc
Confidence            111111122222   234455555565  4599999999999987543355555443

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.69  E-value=3e-08  Score=85.35  Aligned_cols=60  Identities=18%  Similarity=0.388  Sum_probs=51.4

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+|||||||+++.                           ..+|++.+.+++|+++|++++++|||+........+.
T Consensus         6 ~kli~~DlDGTLl~~~---------------------------~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~   58 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNGT---------------------------EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADK   58 (266)
T ss_dssp             CSEEEEECSSSTTCHH---------------------------HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHH
T ss_pred             CCEEEEeCcCceEeCC---------------------------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence            6899999999999832                           2458999999999999999999999887776677888


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      |+.+|+.
T Consensus        59 l~~lg~~   65 (266)
T 3pdw_A           59 LVSFDIP   65 (266)
T ss_dssp             HHHTTCC
T ss_pred             HHHcCCC
Confidence            8888875

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.68  E-value=9.3e-09  Score=85.15  Aligned_cols=131  Identities=11%  Similarity=0.034  Sum_probs=79.2

Q ss_pred             CCCCcEEEEecCCCccCChHHHHHhccCCCCCC-HHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHH
Q 025203          101 GDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLN-ASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSY  179 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~  179 (256)
                      ..+++.+|+|+||||+.+.....   .+ ..|. +-..+.....-.....||+.+||+++.+. ++++++|+.+...   
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~---~~-~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~---   83 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPV---NN-ADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKY---   83 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCC---SS-CSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH---
T ss_pred             cCCCeEEEECCCCCeECCcccCC---CC-ccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHH---
Confidence            35789999999999999752100   00 0000 00000000001256789999999999998 9999999998655   


Q ss_pred             HHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc--EEEEEcCCccccCCCC-CCCc
Q 025203          180 TVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR--IWGVVGDQWSSFEGLP-KPKR  244 (256)
Q Consensus       180 T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~--i~~~iGD~~sDl~ga~-~g~r  244 (256)
                      +...|+.+|..+++..++..++....+.. |    .+.+...|..  -+++|||+..++..+. .|..
T Consensus        84 a~~vl~~ld~~~~f~~~~~rd~~~~~k~~-~----~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~  146 (181)
T 2ght_A           84 ADPVADLLDKWGAFRARLFRESCVFHRGN-Y----VKDLSRLGRDLRRVLILDNSPASYVFHPDNAVP  146 (181)
T ss_dssp             HHHHHHHHCTTCCEEEEECGGGSEEETTE-E----ECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCC
T ss_pred             HHHHHHHHCCCCcEEEEEeccCceecCCc-E----eccHHHhCCCcceEEEEeCCHHHhccCcCCEeE
Confidence            56666777776665444443321111111 1    2334445653  5999999999998764 4443

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.64  E-value=4.5e-08  Score=84.39  Aligned_cols=61  Identities=11%  Similarity=0.238  Sum_probs=52.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+|||||||+++.                           ..+|++.+.+++++++|++++++|||+..........
T Consensus         5 ~kli~~DlDGTLl~~~---------------------------~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~   57 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGK---------------------------SRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEM   57 (264)
T ss_dssp             CCEEEECCBTTTEETT---------------------------EECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred             CCEEEEeCCCceEeCC---------------------------EECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence            6899999999999943                           2449999999999999999999998887777778888


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      |+.+|+..
T Consensus        58 l~~lg~~~   65 (264)
T 3epr_A           58 LRGFNVET   65 (264)
T ss_dssp             HHTTTCCC
T ss_pred             HHHCCCCC
Confidence            99899864

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.62  E-value=4.5e-08  Score=89.31  Aligned_cols=99  Identities=11%  Similarity=0.064  Sum_probs=72.1

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ++++++||+||||++.                           ..++||+.++++.|+++|++++|+||++...+....+
T Consensus        12 ~~~~~l~D~DGvl~~g---------------------------~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~   64 (352)
T 3kc2_A           12 KKIAFAFDIDGVLFRG---------------------------KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTE   64 (352)
T ss_dssp             CCEEEEECCBTTTEET---------------------------TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHH
T ss_pred             cCCEEEEECCCeeEcC---------------------------CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHH
Confidence            5789999999999983                           3578999999999999999999999998777777788


Q ss_pred             HHH-hcCCCCcceEEEecCC-C---CCchhhhh---hHHHHHHHHhcCCcEEEE
Q 025203          183 NLI-HVGYHGWASLELRGLE-D---EYKKVQQY---KAQVRKRLVKEGYRIWGV  228 (256)
Q Consensus       183 ~L~-~~G~~~~~~lilr~~~-~---~~kp~~~~---K~~~r~~l~~~g~~i~~~  228 (256)
                      .|. .+|++.-.+-++.+.. .   ..+....|   ...+++++++.|++.+..
T Consensus        65 ~l~~~lgi~~~~~~i~ts~~~~~~~~~~~~~v~viG~~~l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           65 FISSKLDVDVSPLQIIQSHTPYKSLVNKYSRILAVGTPSVRGVAEGYGFQDVVH  118 (352)
T ss_dssp             HHHHHHTSCCCGGGEECTTGGGGGGTTTCSEEEEESSTTHHHHHHHHTCSEEEE
T ss_pred             HHHHhcCCCCChhhEeehHHHHHHHHhcCCEEEEECCHHHHHHHHhCCCeEecc
Confidence            887 6999754333333321 0   00001111   146788889999998753

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.05  E-value=4e-09  Score=91.84  Aligned_cols=81  Identities=16%  Similarity=0.189  Sum_probs=58.4

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcE
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRI  225 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i  225 (256)
                      .+++||+.++++.|+++|++++++||.+...   ....++++|+..++..++.          ..|....+.+... ...
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~---~~~~~~~~gl~~~f~~~~p----------~~k~~~~~~l~~~-~~~  200 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDK---VKELSKELNIQEYYSNLSP----------EDKVRIIEKLKQN-GNK  200 (263)
Confidence            4689999999999999999999999987654   5667778888766543331          1122223333222 346


Q ss_pred             EEEEcCCccccCCCC
Q 025203          226 WGVVGDQWSSFEGLP  240 (256)
Q Consensus       226 ~~~iGD~~sDl~ga~  240 (256)
                      +++|||+.+|+.++.
T Consensus       201 ~~~VGD~~~D~~aa~  215 (263)
T 2yj3_A          201 VLMIGDGVNDAAALA  215 (263)
Confidence            889999999999874

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.52  E-value=5.2e-07  Score=77.87  Aligned_cols=58  Identities=17%  Similarity=0.214  Sum_probs=47.1

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||+++.                          ....+.+.+.+++++++|++++++|||+...   ....
T Consensus         5 ~kli~fDlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~   55 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSK--------------------------KEISSRNRETLIRIQEQGIRLVLASGRPTYG---IVPL   55 (279)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHH
T ss_pred             ceEEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHH
Confidence            5799999999999965                          2344788999999999999999999998644   4556


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++..|++
T Consensus        56 ~~~l~~~   62 (279)
T 4dw8_A           56 ANELRMN   62 (279)
T ss_dssp             HHHTTGG
T ss_pred             HHHhCCC
Confidence            6677763

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.50  E-value=1.4e-07  Score=81.32  Aligned_cols=59  Identities=22%  Similarity=0.344  Sum_probs=51.5

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      ++++|||||||++..                           .++|++.+++++++++|++++++|||+...+....+.|
T Consensus         2 k~i~~D~DGtL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l   54 (263)
T 1zjj_A            2 VAIIFDMDGVLYRGN---------------------------RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL   54 (263)
T ss_dssp             EEEEEECBTTTEETT---------------------------EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred             eEEEEeCcCceEeCC---------------------------EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence            689999999999832                           24588999999999999999999999987777788888


Q ss_pred             HhcCCC
Q 025203          185 IHVGYH  190 (256)
Q Consensus       185 ~~~G~~  190 (256)
                      +.+|++
T Consensus        55 ~~lg~~   60 (263)
T 1zjj_A           55 LKMGID   60 (263)
T ss_dssp             HTTTCC
T ss_pred             HHCCCC
Confidence            888986

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.50  E-value=1.6e-07  Score=81.75  Aligned_cols=61  Identities=18%  Similarity=0.208  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..++|+||+||||+++.                           .++|++.+.+++++++|++++++||++...+....+
T Consensus        13 ~~k~i~~D~DGtL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~   65 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYN---------------------------GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLAD   65 (284)
T ss_dssp             GCSEEEECSBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHH
T ss_pred             cCCEEEEcCcCCcCcCC---------------------------eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHH
Confidence            36799999999999943                           356899999999999999999999977666677888


Q ss_pred             HHHhcCCC
Q 025203          183 NLIHVGYH  190 (256)
Q Consensus       183 ~L~~~G~~  190 (256)
                      .|+.+|++
T Consensus        66 ~l~~lg~~   73 (284)
T 2hx1_A           66 SYHKLGLF   73 (284)
T ss_dssp             HHHHTTCT
T ss_pred             HHHHCCcC
Confidence            99999997

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.48  E-value=7.8e-07  Score=76.78  Aligned_cols=59  Identities=22%  Similarity=0.282  Sum_probs=40.0

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||+++..                          ...+.+.+.+++++++|++++++|||+...   ....
T Consensus         5 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~   55 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEKN--------------------------ELAQATIDAVQAAKAQGIKVVLCTGRPLTG---VQPY   55 (279)
T ss_dssp             CCEEEECC-------------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHH
T ss_pred             eEEEEEcCcCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            57999999999999652                          234778899999999999999999998643   4666


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++..|++.
T Consensus        56 ~~~l~~~~   63 (279)
T 3mpo_A           56 LDAMDIDG   63 (279)
T ss_dssp             HHHTTCCS
T ss_pred             HHHcCCCC
Confidence            77788764

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.45  E-value=2.7e-07  Score=80.48  Aligned_cols=60  Identities=17%  Similarity=0.078  Sum_probs=46.1

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      ...+.|+|||||||+++.                          ...-+.+.+.+++++++|++++++|||+....   .
T Consensus        19 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~---~   69 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPD--------------------------HFLTPYAKETLKLLTARGINFVFATGRHYIDV---G   69 (285)
T ss_dssp             --CCEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGG---H
T ss_pred             CcceEEEEeCcCCCCCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---H
Confidence            357899999999999964                          23447889999999999999999999997653   3


Q ss_pred             HHHHhcCCC
Q 025203          182 DNLIHVGYH  190 (256)
Q Consensus       182 ~~L~~~G~~  190 (256)
                      ..++.+|++
T Consensus        70 ~~~~~l~~~   78 (285)
T 3pgv_A           70 QIRDNLGIR   78 (285)
T ss_dssp             HHHHHHCSC
T ss_pred             HHHHhcCCC
Confidence            444555554

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.43  E-value=1.2e-06  Score=75.93  Aligned_cols=58  Identities=17%  Similarity=0.234  Sum_probs=47.4

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.|+||+||||+++.                          ....+.+.+.+++++++|+.++++|||+...   ....
T Consensus         6 ~kli~fDlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~   56 (290)
T 3dnp_A            6 KQLLALNIDGALLRSN--------------------------GKIHQATKDAIEYVKKKGIYVTLVTNRHFRS---AQKI   56 (290)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEBCSSCHHH---HHHH
T ss_pred             ceEEEEcCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCChHH---HHHH
Confidence            5799999999999965                          2344788999999999999999999998654   3556


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++..|++
T Consensus        57 ~~~~~~~   63 (290)
T 3dnp_A           57 AKSLKLD   63 (290)
T ss_dssp             HHHTTCC
T ss_pred             HHHcCCC
Confidence            6677876

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=98.41  E-value=7.3e-07  Score=77.84  Aligned_cols=59  Identities=20%  Similarity=0.182  Sum_probs=47.0

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.++||+||||+++.                          ...-|.+.+.+++|+++|++++++|||+...   ....
T Consensus         5 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~---~~~~   55 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPD--------------------------HTISPAVKNAIAAARARGVNVVLTTGRPYAG---VHNY   55 (282)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCGGG---THHH
T ss_pred             ceEEEEeCCCCCCCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            4699999999999954                          2234778999999999999999999998654   4555


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|++.
T Consensus        56 ~~~l~l~~   63 (282)
T 1rkq_A           56 LKELHMEQ   63 (282)
T ss_dssp             HHHTTCCS
T ss_pred             HHHhCCCC
Confidence            66777754

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.40  E-value=5e-07  Score=76.52  Aligned_cols=58  Identities=21%  Similarity=0.256  Sum_probs=44.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||+++.                          ....+.+.+.+++++++|++++++|||+...   ....
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~---~~~~   53 (231)
T 1wr8_A            3 IKAISIDIDGTITYPN--------------------------RMIHEKALEAIRRAESLGIPIMLVTGNTVQF---AEAA   53 (231)
T ss_dssp             CCEEEEESTTTTBCTT--------------------------SCBCHHHHHHHHHHHHTTCCEEEECSSCHHH---HHHH
T ss_pred             eeEEEEECCCCCCCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCChhH---HHHH
Confidence            3689999999999964                          2344788999999999999999999998654   2333


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++..|++
T Consensus        54 ~~~l~~~   60 (231)
T 1wr8_A           54 SILIGTS   60 (231)
T ss_dssp             HHHHTCC
T ss_pred             HHHcCCC
Confidence            4445554

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.40  E-value=1.8e-06  Score=79.54  Aligned_cols=88  Identities=16%  Similarity=0.191  Sum_probs=54.6

Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCC---cceEEE-----ecCCC------C--Cchhhhhh
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHG---WASLEL-----RGLED------E--YKKVQQYK  211 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~---~~~lil-----r~~~~------~--~kp~~~~K  211 (256)
                      .+||+++|++.|+++|+++++||+.....   +....+++|+..   -++++-     ..++.      .  ......-|
T Consensus       222 ~~p~~~eLi~~L~~~G~~v~IVSgg~~~~---v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK  298 (385)
T 4gxt_A          222 TLDEMVDLYRSLEENGIDCYIVSASFIDI---VRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGK  298 (385)
T ss_dssp             ECHHHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHH
T ss_pred             eCHHHHHHHHHHHHCCCeEEEEcCCcHHH---HHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCch
Confidence            58999999999999999999999987644   455556666531   123221     11110      0  00112234


Q ss_pred             HHHHHHHHh--cCCcEEEEEcCCccccCC
Q 025203          212 AQVRKRLVK--EGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       212 ~~~r~~l~~--~g~~i~~~iGD~~sDl~g  238 (256)
                      ....+.+.+  .|++.++.+||+.+|+..
T Consensus       299 ~~~i~~~~~~~~~~~~i~a~GDs~~D~~M  327 (385)
T 4gxt_A          299 VQTINKLIKNDRNYGPIMVGGDSDGDFAM  327 (385)
T ss_dssp             HHHHHHHTCCTTEECCSEEEECSGGGHHH
T ss_pred             HHHHHHHHHhcCCCCcEEEEECCHhHHHH
Confidence            433333322  356678899999999865

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.39  E-value=4.5e-07  Score=79.93  Aligned_cols=60  Identities=18%  Similarity=0.292  Sum_probs=52.2

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||+++.                           .++|++.+.++.|+++|++++++|||+...+....+.
T Consensus        21 ~k~i~~D~DGTL~~~~---------------------------~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~   73 (306)
T 2oyc_A           21 AQGVLFDCDGVLWNGE---------------------------RAVPGAPELLERLARAGKAALFVSNNSRRARPELALR   73 (306)
T ss_dssp             CSEEEECSBTTTEETT---------------------------EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHH
T ss_pred             CCEEEECCCCcEecCC---------------------------ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence            5799999999999842                           3568899999999999999999999887777778888


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      |+..|++
T Consensus        74 ~~~~g~~   80 (306)
T 2oyc_A           74 FARLGFG   80 (306)
T ss_dssp             HHHTTCC
T ss_pred             HHhcCCC
Confidence            8888886

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=98.38  E-value=2.4e-06  Score=74.53  Aligned_cols=100  Identities=15%  Similarity=0.165  Sum_probs=62.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+|||||||+++.                          ....+.+.+.+++++++|++++++|||+...   +...
T Consensus         4 ikli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~---~~~~   54 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSK--------------------------HQVSLENENALRQAQRDGIEVVVSTGRAHFD---VMSI   54 (288)
T ss_dssp             CCEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHH
T ss_pred             eEEEEEeCCCCCCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHH
Confidence            4799999999999964                          1233778899999999999999999998543   4555


Q ss_pred             HHhcCCCCc----c-eEEEecCCC----CCchhhhhhHHHHHHHHhcCCcEEEEEcCCc
Q 025203          184 LIHVGYHGW----A-SLELRGLED----EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQW  233 (256)
Q Consensus       184 L~~~G~~~~----~-~lilr~~~~----~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~  233 (256)
                      ++.+|++.+    . ..+......    ...+. ..-..+.+.+++.|....++-++.+
T Consensus        55 ~~~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~-~~~~~i~~~l~~~~~~~~~~~~~~~  112 (288)
T 1nrw_A           55 FEPLGIKTWVISANGAVIHDPEGRLYHHETIDK-KRAYDILSWLESENYYYEVFTGSAI  112 (288)
T ss_dssp             HGGGTCCCEEEEGGGTEEECTTCCEEEECCCCH-HHHHHHHHHHHHTTCEEEEEESSCE
T ss_pred             HHHcCCCCcEEEcCCeEEEcCCCcEEEEeeCCH-HHHHHHHHHHHHCCcEEEEEeCCEE
Confidence            677777642    1 122211110    00111 1123455566667777666655554

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.36  E-value=5.8e-07  Score=76.91  Aligned_cols=47  Identities=23%  Similarity=0.369  Sum_probs=39.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      .++|+|||||||+++..                          ..-+.+.+.+++++++|++++++|||+...
T Consensus         3 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~~aTGR~~~~   49 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQK--------------------------QLPLSTIEAVRRLKQSGVYVAIATGRAPFM   49 (258)
T ss_dssp             CCEEEECTBTTTBCTTS--------------------------CCCHHHHHHHHHHHHTTCEEEEECSSCGGG
T ss_pred             ceEEEEeCCCCCcCCCC--------------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHH
Confidence            47999999999999651                          233778899999999999999999998654

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.33  E-value=6.7e-07  Score=80.74  Aligned_cols=30  Identities=17%  Similarity=0.533  Sum_probs=27.7

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      ..+|++++|+++|+++|++++|||+.++..
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~  172 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEEL  172 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            478999999999999999999999998765

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.31  E-value=6.6e-07  Score=76.71  Aligned_cols=46  Identities=15%  Similarity=0.196  Sum_probs=39.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      .++|+||+||||+++..                          ...+.+.+.+++++++|++++++|||+..
T Consensus         5 ~kli~fDlDGTLl~~~~--------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~   50 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEVY--------------------------GIPESAKHAIRLCQKNHCSVVICTGRSMG   50 (274)
T ss_dssp             CCEEEECSBTTTBBTTT--------------------------BCCHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             ceEEEEECCCCCCCCCC--------------------------cCCHHHHHHHHHHHHCCCEEEEEeCCChH
Confidence            47999999999999752                          23477889999999999999999999864

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=98.30  E-value=6.8e-07  Score=77.91  Aligned_cols=60  Identities=18%  Similarity=0.213  Sum_probs=46.5

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      +++.|+|||||||+++.                          ....+.+.+.+++|+++|++++++|||+...   ...
T Consensus         8 ~~~li~~DlDGTLl~~~--------------------------~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~---~~~   58 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSH--------------------------SYDWQPAAPWLTRLREANVPVILCSSKTSAE---MLY   58 (275)
T ss_dssp             CCEEEEEECTTTTSCSS--------------------------CCSCCTTHHHHHHHHHTTCCEEEECSSCHHH---HHH
T ss_pred             CceEEEEeCCCCCCCCC--------------------------CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHH---HHH
Confidence            46899999999999853                          1122557899999999999999999998543   456


Q ss_pred             HHHhcCCCC
Q 025203          183 NLIHVGYHG  191 (256)
Q Consensus       183 ~L~~~G~~~  191 (256)
                      .++.+|++.
T Consensus        59 ~~~~l~~~~   67 (275)
T 1xvi_A           59 LQKTLGLQG   67 (275)
T ss_dssp             HHHHTTCTT
T ss_pred             HHHHcCCCC
Confidence            667777754

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.28  E-value=7.5e-07  Score=77.63  Aligned_cols=50  Identities=16%  Similarity=0.162  Sum_probs=41.7

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      ...+.|+|||||||+++..                         ...-+.+.+.+++++++|++++++|||+...
T Consensus        19 ~~~kli~~DlDGTLl~~~~-------------------------~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~   68 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGS-------------------------LLIDPEYMSVIDRLIDKGIIFVVCSGRQFSS   68 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTC-------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             cCceEEEEeCcCCCCCCCC-------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            4578999999999998651                         1344889999999999999999999998643

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=98.18  E-value=2e-06  Score=74.04  Aligned_cols=47  Identities=19%  Similarity=0.187  Sum_probs=39.8

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      ..+.|+|||||||+++.                          ...-|.+.+.+++|+++|++++++|||+..
T Consensus         3 ~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~   49 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTPPR--------------------------LCQTDEMRALIKRARGAGFCVGTVGGSDFA   49 (246)
T ss_dssp             CSEEEEECSBTTTBSTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             CceEEEEeCcCCcCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence            36899999999999954                          123378899999999999999999999854

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=98.17  E-value=2.4e-06  Score=73.93  Aligned_cols=58  Identities=19%  Similarity=0.146  Sum_probs=44.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.++||+||||+++.                          ...-+.+.+.+++ +++|++++++|||+...   ....
T Consensus         2 ikli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~---~~~~   51 (268)
T 1nf2_A            2 YRVFVFDLDGTLLNDN--------------------------LEISEKDRRNIEK-LSRKCYVVFASGRMLVS---TLNV   51 (268)
T ss_dssp             BCEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHH-HTTTSEEEEECSSCHHH---HHHH
T ss_pred             ccEEEEeCCCcCCCCC--------------------------CccCHHHHHHHHH-HhCCCEEEEECCCChHH---HHHH
Confidence            3689999999999954                          1233778899999 99999999999998644   4455


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++.+|++.
T Consensus        52 ~~~l~~~~   59 (268)
T 1nf2_A           52 EKKYFKRT   59 (268)
T ss_dssp             HHHHSSSC
T ss_pred             HHHhCCCC
Confidence            56667643

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.15  E-value=2.3e-06  Score=73.29  Aligned_cols=46  Identities=24%  Similarity=0.452  Sum_probs=38.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .+.|+||+||||++..                         ....-+.+.+.+++++++|++++++|||+.
T Consensus        12 iKli~~DlDGTLl~~~-------------------------~~~i~~~~~~al~~l~~~G~~~~iaTGR~~   57 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSFE-------------------------THKVSQSSIDALKKVHDSGIKIVIATGRAA   57 (268)
T ss_dssp             CCEEEECSBTTTBCTT-------------------------TCSCCHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             eEEEEEeCCCCCcCCC-------------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCh
Confidence            6899999999999832                         023447889999999999999999999974

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=98.14  E-value=3.2e-06  Score=74.77  Aligned_cols=47  Identities=15%  Similarity=0.216  Sum_probs=39.7

Q ss_pred             CcEEEEecCCCccCC-hHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          104 KDAWIFDVDDTLLST-IPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn-~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      .+.|+|||||||+++ .                          ...-|.+.+.+++|+++|++++++|||+...
T Consensus        27 ikli~~DlDGTLl~~~~--------------------------~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~   74 (301)
T 2b30_A           27 IKLLLIDFDGTLFVDKD--------------------------IKVPSENIDAIKEAIEKGYMVSICTGRSKVG   74 (301)
T ss_dssp             CCEEEEETBTTTBCCTT--------------------------TCSCHHHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred             ccEEEEECCCCCcCCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            479999999999996 3                          2234778999999999999999999998544

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.12  E-value=2.6e-06  Score=73.05  Aligned_cols=46  Identities=28%  Similarity=0.460  Sum_probs=38.3

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      +.|+|||||||+++..                         ...-+.+.+.+++|+++|++++++|||+ ..
T Consensus         3 kli~~DlDGTLl~~~~-------------------------~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~   48 (261)
T 2rbk_A            3 KALFFDIDGTLVSFET-------------------------HRIPSSTIEALEAAHAKGLKIFIATGRP-KA   48 (261)
T ss_dssp             CEEEECSBTTTBCTTT-------------------------SSCCHHHHHHHHHHHHTTCEEEEECSSC-GG
T ss_pred             cEEEEeCCCCCcCCCC-------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCh-HH
Confidence            6899999999999641                         1134778999999999999999999998 54

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=98.12  E-value=2.9e-06  Score=73.42  Aligned_cols=45  Identities=22%  Similarity=0.375  Sum_probs=37.1

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHH-HHHHHHHHHHcCCeEEEEeCCCc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEH-TLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg-~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .+.|+|||||||+++.                          ...-+. +.+.+++|+++|++++++|||+.
T Consensus         3 ~kli~~DlDGTLl~~~--------------------------~~i~~~~~~~al~~l~~~G~~~~iaTGR~~   48 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDA--------------------------KTYNQPRFMAQYQELKKRGIKFVVASGNQY   48 (271)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHHHTCEEEEECSSCH
T ss_pred             ccEEEEeCCCCCCCCC--------------------------CcCCHHHHHHHHHHHHHCCCEEEEEeCCcH
Confidence            4789999999999954                          122355 48999999999999999999984

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=98.10  E-value=5.1e-06  Score=68.99  Aligned_cols=59  Identities=17%  Similarity=0.296  Sum_probs=42.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||+++.+                           .++.+.++++.++++|+++.++|++.........+.
T Consensus         3 ~k~i~fDlDGTLl~~~~---------------------------~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~   55 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDNV---------------------------AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR   55 (250)
T ss_dssp             CCEEEEECBTTTEETTE---------------------------ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred             ccEEEEcCcceEEeCCE---------------------------eCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHH
Confidence            47999999999999642                           234447888999999999999996654444445555


Q ss_pred             HHhcCC
Q 025203          184 LIHVGY  189 (256)
Q Consensus       184 L~~~G~  189 (256)
                      +...|+
T Consensus        56 ~~~~g~   61 (250)
T 2c4n_A           56 FATAGV   61 (250)
T ss_dssp             HHHTTC
T ss_pred             HHHcCC
Confidence            555554

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=98.09  E-value=2.8e-06  Score=72.77  Aligned_cols=55  Identities=18%  Similarity=0.216  Sum_probs=42.4

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.|+|||||||+ +.                         ..  ++.+.+.+++|+++|++++++|||+...   ....+
T Consensus         3 kli~~DlDGTLl-~~-------------------------~~--~~~~~~~l~~l~~~g~~~~i~Tgr~~~~---~~~~~   51 (249)
T 2zos_A            3 RLIFLDIDKTLI-PG-------------------------YE--PDPAKPIIEELKDMGFEIIFNSSKTRAE---QEYYR   51 (249)
T ss_dssp             EEEEECCSTTTC-TT-------------------------SC--SGGGHHHHHHHHHTTEEEEEBCSSCHHH---HHHHH
T ss_pred             cEEEEeCCCCcc-CC-------------------------CC--cHHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHH
Confidence            689999999999 32                         01  1347899999999999999999998543   44555


Q ss_pred             HhcCCC
Q 025203          185 IHVGYH  190 (256)
Q Consensus       185 ~~~G~~  190 (256)
                      +.+|++
T Consensus        52 ~~~~~~   57 (249)
T 2zos_A           52 KELEVE   57 (249)
T ss_dssp             HHHTCC
T ss_pred             HHcCCC
Confidence            666765

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.08  E-value=3.9e-06  Score=73.82  Aligned_cols=45  Identities=16%  Similarity=0.237  Sum_probs=37.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHH-HHHHHHHHHHcCCeEEEEeCCCc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEH-TLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg-~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .++|+||+||||+++..                          ...+. +.+.+++++++|+.++++|||+.
T Consensus        37 iKli~fDlDGTLld~~~--------------------------~i~~~~~~~al~~l~~~G~~~~iaTGR~~   82 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSKG--------------------------SYDHNRFQRILKQLQERDIRFVVASSNPY   82 (304)
T ss_dssp             CSEEEECCCCCCSCTTS--------------------------CCCHHHHHHHHHHHHHTTCEEEEECSSCH
T ss_pred             eEEEEEeCCCCCCCCCC--------------------------ccCHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence            58999999999999652                          23355 78999999999999999999974

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=98.00  E-value=5.4e-06  Score=70.66  Aligned_cols=45  Identities=22%  Similarity=0.360  Sum_probs=38.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      +++.++|||||||+++.                          ...-+.+++.+++|+++ ++++++|||+.
T Consensus         5 ~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~-i~v~iaTGR~~   49 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPR--------------------------QKITKEMDDFLQKLRQK-IKIGVVGGSDF   49 (246)
T ss_dssp             CSEEEEEESBTTTBCTT--------------------------SCCCHHHHHHHHHHTTT-SEEEEECSSCH
T ss_pred             CceEEEEECCCCcCCCC--------------------------cccCHHHHHHHHHHHhC-CeEEEEcCCCH
Confidence            57899999999999853                          12337899999999999 99999999974

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=97.97  E-value=5.9e-05  Score=66.14  Aligned_cols=94  Identities=14%  Similarity=0.074  Sum_probs=59.8

Q ss_pred             hcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-----CC------------CCCc
Q 025203          143 ESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-----LE------------DEYK  205 (256)
Q Consensus       143 ~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-----~~------------~~~k  205 (256)
                      ....++.||+.++++.|+++|++++++||-.   ...+...++++|+......+...     ++            ...|
T Consensus       137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~---~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k  213 (297)
T 4fe3_A          137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGI---GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNK  213 (297)
T ss_dssp             TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEE---HHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCH
T ss_pred             hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCc---HHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhc
Confidence            3467899999999999999999999999964   44567777888986432111111     11            0112


Q ss_pred             hhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCC
Q 025203          206 KVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       206 p~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~  240 (256)
                      +.+..|......+.+. ...++++||+.+|+.+++
T Consensus       214 ~~~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k  247 (297)
T 4fe3_A          214 HDGALKNTDYFSQLKD-NSNIILLGDSQGDLRMAD  247 (297)
T ss_dssp             HHHHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTT
T ss_pred             ccHHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHh
Confidence            2222232233334333 345778899999988743

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=97.88  E-value=1.2e-05  Score=68.59  Aligned_cols=49  Identities=24%  Similarity=0.327  Sum_probs=38.1

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      +.++|||||||++....                     .....+-|.+++.+++|+++| +++++|||+..
T Consensus         2 kli~~DlDGTLl~~~~~---------------------~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~   50 (239)
T 1u02_A            2 SLIFLDYDGTLVPIIMN---------------------PEESYADAGLLSLISDLKERF-DTYIVTGRSPE   50 (239)
T ss_dssp             CEEEEECBTTTBCCCSC---------------------GGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHH
T ss_pred             eEEEEecCCCCcCCCCC---------------------cccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHH
Confidence            57999999999984310                     001234588999999999999 99999999854

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=97.86  E-value=1.2e-05  Score=69.27  Aligned_cols=46  Identities=22%  Similarity=0.293  Sum_probs=37.8

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      ..+.|+|||||||+++.                          ...-|.+.+.+++|+++ ++++++|||+..
T Consensus        12 ~~kli~~DlDGTLl~~~--------------------------~~is~~~~~al~~l~~~-i~v~iaTGR~~~   57 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPAR--------------------------QKIDPEVAAFLQKLRSR-VQIGVVGGSDYC   57 (262)
T ss_dssp             -CEEEEEESBTTTBSTT--------------------------SCCCHHHHHHHHHHTTT-SEEEEECSSCHH
T ss_pred             CeEEEEEeCccCCCCCC--------------------------CcCCHHHHHHHHHHHhC-CEEEEEcCCCHH
Confidence            46899999999999853                          12337899999999999 999999999753

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.79  E-value=1.3e-05  Score=68.78  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=35.3

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .|+||+||||+++. .                          ..+.+.+.+++++++|++++++|||+.
T Consensus         2 li~~DlDGTLl~~~-~--------------------------i~~~~~~al~~l~~~Gi~v~iaTGR~~   43 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-G--------------------------ELGPAREALERLRALGVPVVPVTAKTR   43 (259)
T ss_dssp             EEEECCCCCCSCSS-S--------------------------SCSTTHHHHHHHHHTTCCEEEBCSSCH
T ss_pred             EEEEeCCCCCcCCC-c--------------------------CCHHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            68999999999964 2                          235678889999999999999999973

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=97.67  E-value=4.6e-05  Score=64.99  Aligned_cols=55  Identities=20%  Similarity=0.196  Sum_probs=39.3

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      ..++|||||||+++..                           .++.+.+.+++++ +|++++++|||+...   ....+
T Consensus         4 ~li~~DlDGTLl~~~~---------------------------~~~~~~~~l~~~~-~gi~v~iaTGR~~~~---~~~~~   52 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQ---------------------------ALEHLQEYLGDRR-GNFYLAYATGRSYHS---ARELQ   52 (244)
T ss_dssp             EEEEECTBTTTBSCHH---------------------------HHHHHHHHHHTTG-GGEEEEEECSSCHHH---HHHHH
T ss_pred             eEEEEeCCCCCcCCHH---------------------------HHHHHHHHHHHhc-CCCEEEEEcCCCHHH---HHHHH
Confidence            3899999999999541                           1255677777755 689999999998543   44555


Q ss_pred             HhcCCC
Q 025203          185 IHVGYH  190 (256)
Q Consensus       185 ~~~G~~  190 (256)
                      +.+|+.
T Consensus        53 ~~l~l~   58 (244)
T 1s2o_A           53 KQVGLM   58 (244)
T ss_dssp             HHHTCC
T ss_pred             HHcCCC
Confidence            555553

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=97.36  E-value=1.4e-05  Score=68.56  Aligned_cols=98  Identities=10%  Similarity=-0.113  Sum_probs=59.5

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHh-cCCCCcc-eEEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH-VGYHGWA-SLELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~-~G~~~~~-~lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++|++.++++.|+ +|+++ ++||.+...... ...+.. .|+..++ .++.+.+...+||.+.......+.   ...
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~-~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~---~~~  202 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGE-EGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM---FPG  202 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEET-TEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH---STT
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCC-CCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh---CCc
Confidence            567899999999999 89998 999987532100 000111 1111111 122222223467776443333222   455


Q ss_pred             cEEEEEcCCc-cccCCCC-CCCcEEEec
Q 025203          224 RIWGVVGDQW-SSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       224 ~i~~~iGD~~-sDl~ga~-~g~r~fklP  249 (256)
                      +.+++|||++ +|+.++. +|.+++.+.
T Consensus       203 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~  230 (263)
T 1zjj_A          203 EELWMVGDRLDTDIAFAKKFGMKAIMVL  230 (263)
T ss_dssp             CEEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred             ccEEEECCChHHHHHHHHHcCCeEEEEC
Confidence            6799999996 9999884 788888764

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=97.27  E-value=0.0001  Score=62.01  Aligned_cols=110  Identities=13%  Similarity=-0.024  Sum_probs=69.5

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .++..+|+|+||||+.+..-. .++                 -.....||+.+||+++. +++.|++.|+.....   +.
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~-~~~-----------------~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~y---a~   89 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQ-KHG-----------------WRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMY---SD   89 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEET-TTE-----------------EEEEECTTHHHHHHHHT-TTEEEEEECSSCHHH---HH
T ss_pred             CCCeEEEEeccccEEeeeccc-cCc-----------------eeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHH---HH
Confidence            567899999999999975210 000                 02567899999999998 789999999987655   45


Q ss_pred             HHHHhcCCC-Ccc-eEEEecCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCC
Q 025203          182 DNLIHVGYH-GWA-SLELRGLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGL  239 (256)
Q Consensus       182 ~~L~~~G~~-~~~-~lilr~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga  239 (256)
                      ..++.++-. .++ ..+.|+.... .+. .|.    +.|...|.  +-+++|.|+..-+...
T Consensus        90 ~vl~~LDp~~~~f~~rl~R~~c~~-~~g-~y~----KdL~~Lgrdl~~vIiIDDsp~~~~~~  145 (204)
T 3qle_A           90 KIAEKLDPIHAFVSYNLFKEHCVY-KDG-VHI----KDLSKLNRDLSKVIIIDTDPNSYKLQ  145 (204)
T ss_dssp             HHHHHTSTTCSSEEEEECGGGSEE-ETT-EEE----CCGGGSCSCGGGEEEEESCTTTTTTC
T ss_pred             HHHHHhCCCCCeEEEEEEecceeE-ECC-eee----ecHHHhCCChHHEEEEECCHHHHhhC
Confidence            555555543 243 3344433211 111 121    23333454  3588999999877553

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=97.19  E-value=0.00036  Score=66.67  Aligned_cols=94  Identities=19%  Similarity=0.217  Sum_probs=59.9

Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCC----------CCc---ceEEEecCCCCCchhh------
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGY----------HGW---ASLELRGLEDEYKKVQ------  208 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~----------~~~---~~lilr~~~~~~kp~~------  208 (256)
                      +-|.+..+|++|++.| +++++||.+....+...+.|-  |+          ..|   +.+++....   ||..      
T Consensus       247 kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yll--g~~~~~~~~~~~~dWrdlFD~vI~~A~---KP~FF~~~~p  320 (555)
T 2jc9_A          247 KDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLF--DFPHGPKPGSSHRPWQSYFDLILVDAR---KPLFFGEGTV  320 (555)
T ss_dssp             CCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHT--CSSSSSSTTSCCCCGGGGCSEEEESCC---TTGGGTTCCC
T ss_pred             CChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhc--CCCccccccccccchhhhCCEEEEeCC---CCCcccCCCc
Confidence            3478999999999999 999999999876545555552  43          334   555443321   1110      


Q ss_pred             ------------------------hh----hHHHHHHHHhcCCcEEEEEcCCc-cccCCCC--CCCcEEEe
Q 025203          209 ------------------------QY----KAQVRKRLVKEGYRIWGVVGDQW-SSFEGLP--KPKRTFKL  248 (256)
Q Consensus       209 ------------------------~~----K~~~r~~l~~~g~~i~~~iGD~~-sDl~ga~--~g~r~fkl  248 (256)
                                              .|    .....+.+ ...-..++|||||. +|+.+++  .|-||+.+
T Consensus       321 fr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~ll-g~~g~eVLYVGDhIftDIl~~kk~~GWrTiLV  390 (555)
T 2jc9_A          321 LRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLL-GAKGKDILYIGDHIFGDILKSKKRQGWRTFLV  390 (555)
T ss_dssp             EEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHH-TCCGGGEEEEESCCCCCCHHHHHHHCCEEEEE
T ss_pred             ceEeecCCCccccccccccccCCceeccCCHHHHHHHh-CCCCCeEEEECCEehHhHHhHHhhcCeEEEEE
Confidence                                    11    01222222 12234689999997 9999885  78999876

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.10  E-value=0.00047  Score=63.10  Aligned_cols=137  Identities=12%  Similarity=0.134  Sum_probs=73.9

Q ss_pred             CCCcEEEEecCCCccCCh--HHH-HHhccCCC-CCCH-H---HHH--H----HHHhcCCcchHHHHHHHHHHHHcCCeEE
Q 025203          102 DGKDAWIFDVDDTLLSTI--PYF-KKHGFGGE-RLNA-S---SWE--A----WMKESKAPALEHTLNLFHEIKNRGVKIF  167 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~--~~~-~~~~~g~~-~~~~-~---~~~--~----wv~~~~~~~~pg~~ell~~L~~~G~~i~  167 (256)
                      .+++++|||+||||+++.  |.. .+...+.. +++. .   .|.  +    -...-.....||+.+||+++. +++.|+
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yeiv   94 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELH   94 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEEE
Confidence            457899999999999984  111 00001100 0000 0   000  0    000012455799999999999 889999


Q ss_pred             EEeCCCcccHHHHHHHHHhcCCCC-c-c-eEEEecCCCCCchhhhhhHHHHHHHHhc-C--CcEEEEEcCCccccCCCCC
Q 025203          168 LVSSRRESLRSYTVDNLIHVGYHG-W-A-SLELRGLEDEYKKVQQYKAQVRKRLVKE-G--YRIWGVVGDQWSSFEGLPK  241 (256)
Q Consensus       168 ivTnR~~~~r~~T~~~L~~~G~~~-~-~-~lilr~~~~~~kp~~~~K~~~r~~l~~~-g--~~i~~~iGD~~sDl~ga~~  241 (256)
                      +.|.....+-+   ..++.++-.+ + . +++-|.+...     .|.    +.|... |  .+-+++|.|++.-+..-  
T Consensus        95 I~Tas~~~yA~---~vl~~LDp~~~~f~~ri~sr~~~g~-----~~~----KdL~~L~~~dl~~viiiDd~~~~~~~~--  160 (372)
T 3ef0_A           95 IYTMGTKAYAK---EVAKIIDPTGKLFQDRVLSRDDSGS-----LAQ----KSLRRLFPCDTSMVVVIDDRGDVWDWN--  160 (372)
T ss_dssp             EECSSCHHHHH---HHHHHHCTTSCSSSSCEECTTTSSC-----SSC----CCGGGTCSSCCTTEEEEESCSGGGTTC--
T ss_pred             EEeCCcHHHHH---HHHHHhccCCceeeeEEEEecCCCC-----cce----ecHHHhcCCCCceEEEEeCCHHHcCCC--
Confidence            99999876644   4444444433 3 3 3333543211     111    122222 3  34588999998655433  


Q ss_pred             CCcEEEecCCCCC
Q 025203          242 PKRTFKLPNSMYY  254 (256)
Q Consensus       242 g~r~fklPnp~Y~  254 (256)
                      . -.+.++.-.||
T Consensus       161 p-N~I~i~~~~~f  172 (372)
T 3ef0_A          161 P-NLIKVVPYEFF  172 (372)
T ss_dssp             T-TEEECCCCCCS
T ss_pred             C-cEeeeCCcccc
Confidence            2 55666655555

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.09  E-value=0.00073  Score=60.61  Aligned_cols=123  Identities=11%  Similarity=-0.028  Sum_probs=71.3

Q ss_pred             ccCCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccH
Q 025203           98 SLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLR  177 (256)
Q Consensus        98 ~~~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r  177 (256)
                      .+...+++.+|+|+||||+.+...            ...|.       ...-||+.+||+++. +++.|++-|.....+.
T Consensus       134 ~p~~~~k~tLVLDLDeTLvh~~~~------------~~~~~-------~~~RP~l~eFL~~l~-~~yeivIfTas~~~ya  193 (320)
T 3shq_A          134 APPREGKKLLVLDIDYTLFDHRSP------------AETGT-------ELMRPYLHEFLTSAY-EDYDIVIWSATSMRWI  193 (320)
T ss_dssp             SCCCTTCEEEEECCBTTTBCSSSC------------CSSHH-------HHBCTTHHHHHHHHH-HHEEEEEECSSCHHHH
T ss_pred             CCCcCCCcEEEEeccccEEccccc------------CCCcc-------eEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHH
Confidence            445567899999999999997521            00121       235699999999999 6799999999987664


Q ss_pred             HHHHHHHHhcCCCCcceEEEecCCCC----Cchhh-hhhHHHHHH---HHhcCCcEEEEEcCCccccCCCC
Q 025203          178 SYTVDNLIHVGYHGWASLELRGLEDE----YKKVQ-QYKAQVRKR---LVKEGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       178 ~~T~~~L~~~G~~~~~~lilr~~~~~----~kp~~-~~K~~~r~~---l~~~g~~i~~~iGD~~sDl~ga~  240 (256)
                      +...+.|.-.|...+...+.++....    .+... .|.+.+...   +...+..-+++|.|++.-+....
T Consensus       194 ~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p  264 (320)
T 3shq_A          194 EEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNP  264 (320)
T ss_dssp             HHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSG
T ss_pred             HHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCc
Confidence            44444443333322333344443210    00011 122122211   11123345889999998776543

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=96.96  E-value=0.00073  Score=66.04  Aligned_cols=78  Identities=14%  Similarity=0.081  Sum_probs=57.1

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcE
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRI  225 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i  225 (256)
                      .++.|++.+.++.|+++|+++.++||++...   +....++.|++.+   +.+- .      |.-|....+.+++.  +.
T Consensus       456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~---a~~ia~~lgi~~~---~~~~-~------P~~K~~~v~~l~~~--~~  520 (645)
T 3j08_A          456 DTLKESAKPAVQELKRMGIKVGMITGDNWRS---AEAISRELNLDLV---IAEV-L------PHQKSEEVKKLQAK--EV  520 (645)
T ss_dssp             CCCTTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSEE---ECSC-C------TTCHHHHHHHHTTT--CC
T ss_pred             CCchhHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHHHHHcCCCEE---EEeC-C------HHhHHHHHHHHhhC--Ce
Confidence            4577999999999999999999999998643   5556677888632   2111 1      22345555666554  78


Q ss_pred             EEEEcCCccccCC
Q 025203          226 WGVVGDQWSSFEG  238 (256)
Q Consensus       226 ~~~iGD~~sDl~g  238 (256)
                      ++++||..+|..+
T Consensus       521 v~~vGDg~ND~~a  533 (645)
T 3j08_A          521 VAFVGDGINDAPA  533 (645)
T ss_dssp             EEEEECSSSCHHH
T ss_pred             EEEEeCCHhHHHH
Confidence            9999999999865

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=96.95  E-value=2.6e-05  Score=67.55  Aligned_cols=99  Identities=13%  Similarity=-0.037  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCcccH--HHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhc-CC--
Q 025203          150 EHTLNLFHEIKNRGVKIFLVSSRRESLR--SYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKE-GY--  223 (256)
Q Consensus       150 pg~~ell~~L~~~G~~i~ivTnR~~~~r--~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~-g~--  223 (256)
                      +...++++.|+++|++ +++||.+....  .. ...+...|+..++..++..+ ....||++.......+.+.+. |.  
T Consensus       148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~-~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~  225 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTKT-DVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISK  225 (284)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEECCCSEEECSSS-CEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCG
T ss_pred             ccHHHHHHHHhcCCCe-EEEECCCccccCcCC-CccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCc
Confidence            3445555588999999 99999875431  10 00012223322322222222 234677774433333333100 43  


Q ss_pred             cEEEEEcCCc-cccCCCC-CCCcEEEecC
Q 025203          224 RIWGVVGDQW-SSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 ~i~~~iGD~~-sDl~ga~-~g~r~fklPn  250 (256)
                      ..+++|||++ +|+.+|. +|.+++.+..
T Consensus       226 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~  254 (284)
T 2hx1_A          226 REILMVGDTLHTDILGGNKFGLDTALVLT  254 (284)
T ss_dssp             GGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred             ceEEEECCCcHHHHHHHHHcCCeEEEECC
Confidence            4599999996 9999884 7888887754

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=96.91  E-value=3.9e-05  Score=67.36  Aligned_cols=101  Identities=8%  Similarity=-0.136  Sum_probs=59.4

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcC-CCCcce-EEEecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVG-YHGWAS-LELRGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G-~~~~~~-lilr~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++|++.++++.|+++|+ ++++||.+..........+...| +..++. .+.......+||.+.   .....++..|.
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~---~~~~~~~~lgi  230 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPY---MFECITENFSI  230 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTH---HHHHHHHHSCC
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHH---HHHHHHHHcCC
Confidence            4568999999999999999 99999987543100000011111 111111 111111234556553   23344555564


Q ss_pred             --cEEEEEcCCc-cccCCCC-CCCcEEEecC
Q 025203          224 --RIWGVVGDQW-SSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga~-~g~r~fklPn  250 (256)
                        +.+++|||++ +|+.++. +|.+++.+..
T Consensus       231 ~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~  261 (306)
T 2oyc_A          231 DPARTLMVGDRLETDILFGHRCGMTTVLTLT  261 (306)
T ss_dssp             CGGGEEEEESCTTTHHHHHHHHTCEEEEESS
T ss_pred             ChHHEEEECCCchHHHHHHHHCCCeEEEECC
Confidence              3599999996 9999874 7888887643

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=96.84  E-value=0.0017  Score=64.45  Aligned_cols=79  Identities=15%  Similarity=0.198  Sum_probs=58.1

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcE
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRI  225 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i  225 (256)
                      .++-|++.+.++.|+++|++++++||+....   +....++.|++.+   +.+-       .|.-|....+.+++.| +.
T Consensus       553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~---a~~ia~~lgi~~v---~a~~-------~P~~K~~~v~~l~~~g-~~  618 (736)
T 3rfu_A          553 DPIKSSTPETILELQQSGIEIVMLTGDSKRT---AEAVAGTLGIKKV---VAEI-------MPEDKSRIVSELKDKG-LI  618 (736)
T ss_dssp             CCBCSSHHHHHHHHHHHTCEEEEECSSCHHH---HHHHHHHHTCCCE---ECSC-------CHHHHHHHHHHHHHHS-CC
T ss_pred             ccchhhHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCCEE---EEec-------CHHHHHHHHHHHHhcC-CE
Confidence            5677999999999999999999999998643   4555577888642   2111       1334566667776665 45


Q ss_pred             EEEEcCCccccCC
Q 025203          226 WGVVGDQWSSFEG  238 (256)
Q Consensus       226 ~~~iGD~~sDl~g  238 (256)
                      ++++||..||..+
T Consensus       619 V~~vGDG~ND~pa  631 (736)
T 3rfu_A          619 VAMAGDGVNDAPA  631 (736)
T ss_dssp             EEEEECSSTTHHH
T ss_pred             EEEEECChHhHHH
Confidence            8899999999754

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=96.70  E-value=3.7e-05  Score=63.66  Aligned_cols=98  Identities=15%  Similarity=-0.030  Sum_probs=57.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEE---------------------------------EEeCCCcccHHHHHHHHHhcC-CC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIF---------------------------------LVSSRRESLRSYTVDNLIHVG-YH  190 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~---------------------------------ivTnR~~~~r~~T~~~L~~~G-~~  190 (256)
                      ...+.|++.++++.+++.|++++                                 ++|+.+ ...   ...+...| +.
T Consensus        85 ~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~---~~~~~~~~~~~  160 (250)
T 2c4n_A           85 KKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THG---RGFYPACGALC  160 (250)
T ss_dssp             CEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBS---STTCBCHHHHH
T ss_pred             CEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCC---CCeeecchHHH
Confidence            45678999999999999999998                                 888865 210   11111111 11


Q ss_pred             CcceEEEe-cCCCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCC-ccccCCCC-CCCcEEEec
Q 025203          191 GWASLELR-GLEDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQ-WSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       191 ~~~~lilr-~~~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~-~sDl~ga~-~g~r~fklP  249 (256)
                      .++..+.. .....+||.+   ....+.++..|.  +.+++|||+ .+|+.++. +|..++.+.
T Consensus       161 ~~~~~~~~~~~~~~~kpk~---~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~  221 (250)
T 2c4n_A          161 AGIEKISGRKPFYVGKPSP---WIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL  221 (250)
T ss_dssp             HHHHHHHCCCCEECSTTST---HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred             HHHHHHhCCCceEeCCCCH---HHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEEC
Confidence            11111111 1112334433   233444455554  459999999 69999874 788777664

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=96.64  E-value=0.0019  Score=66.14  Aligned_cols=90  Identities=13%  Similarity=0.240  Sum_probs=60.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc----eEEEecCC-CCCch-------------
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA----SLELRGLE-DEYKK-------------  206 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~----~lilr~~~-~~~kp-------------  206 (256)
                      ..++.|++.+.++.|+++|+++.++||.....   +....++.|+....    ..++.+.. ..-++             
T Consensus       601 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~t---a~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~  677 (995)
T 3ar4_A          601 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGT---AIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCF  677 (995)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEE
T ss_pred             cCCCchhHHHHHHHHHHcCCEEEEECCCCHHH---HHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEE
Confidence            36788999999999999999999999997643   44445667885431    11222110 00000             


Q ss_pred             ---hhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          207 ---VQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       207 ---~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                         .|.-|..+-+.+++.| ++++++||..+|..+
T Consensus       678 ~r~~P~~K~~~v~~l~~~g-~~v~~~GDG~ND~~a  711 (995)
T 3ar4_A          678 ARVEPSHKSKIVEYLQSYD-EITAMTGDGVNDAPA  711 (995)
T ss_dssp             ESCCSSHHHHHHHHHHTTT-CCEEEEECSGGGHHH
T ss_pred             EEeCHHHHHHHHHHHHHCC-CEEEEEcCCchhHHH
Confidence               1345666777777776 578899999999865

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=96.57  E-value=0.0035  Score=61.96  Aligned_cols=78  Identities=14%  Similarity=0.100  Sum_probs=56.8

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcE
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRI  225 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i  225 (256)
                      .++.|++.+.++.|+++|+++.++||++...   +....++.|++.   .+.+- .      |.-|....+.+++.  +.
T Consensus       534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~---a~~ia~~lgi~~---~~~~~-~------P~~K~~~v~~l~~~--~~  598 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMGIKVGMITGDNWRS---AEAISRELNLDL---VIAEV-L------PHQKSEEVKKLQAK--EV  598 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCSE---EECSC-C------TTCHHHHHHHHTTT--CC
T ss_pred             CCcchhHHHHHHHHHHCCCEEEEECCCCHHH---HHHHHHHcCCcE---EEccC-C------HHHHHHHHHHHhcC--Ce
Confidence            5677999999999999999999999998643   455556788863   22111 1      22345556666554  77


Q ss_pred             EEEEcCCccccCC
Q 025203          226 WGVVGDQWSSFEG  238 (256)
Q Consensus       226 ~~~iGD~~sDl~g  238 (256)
                      ++++||..||...
T Consensus       599 v~~vGDg~ND~~a  611 (723)
T 3j09_A          599 VAFVGDGINDAPA  611 (723)
T ss_dssp             EEEEECSSTTHHH
T ss_pred             EEEEECChhhHHH
Confidence            9999999999764

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=96.47  E-value=0.007  Score=62.15  Aligned_cols=90  Identities=16%  Similarity=0.149  Sum_probs=59.5

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc------------------------eEEEecC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA------------------------SLELRGL  200 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~------------------------~lilr~~  200 (256)
                      ..++-|++.+.++.|+++|+++.++||+....   +....++.|+....                        ..++.+.
T Consensus       597 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~t---A~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~  673 (1028)
T 2zxe_A          597 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT---AKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGS  673 (1028)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHH
T ss_pred             CCCCChhHHHHHHHHHHcCCEEEEECCCCHHH---HHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcH
Confidence            36788999999999999999999999998643   33344556765210                        1111111


Q ss_pred             CC-------------------CCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          201 ED-------------------EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       201 ~~-------------------~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      ..                   -....|..|..+-+.+++.| .+++++||..||..+
T Consensus       674 ~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g-~~V~~iGDG~ND~pa  729 (1028)
T 2zxe_A          674 DLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG-AIVAVTGDGVNDSPA  729 (1028)
T ss_dssp             HHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECSGGGHHH
T ss_pred             HhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC-CEEEEEcCCcchHHH
Confidence            00                   00012445667777777766 578899999999854

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=96.39  E-value=0.011  Score=60.72  Aligned_cols=43  Identities=12%  Similarity=0.193  Sum_probs=34.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYH  190 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~  190 (256)
                      ..|+-|++.+.+++|+++|++++++|||....   +....++.|+.
T Consensus       602 ~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~t---A~~ia~~lgi~  644 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPIT---AKAIAASVGII  644 (1034)
T ss_pred             cCCCchhHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHHcCCC
Confidence            46889999999999999999999999998643   34444566764

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=95.92  E-value=0.014  Score=59.15  Aligned_cols=89  Identities=19%  Similarity=0.188  Sum_probs=58.9

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc----ceEEEecCC---------------CCCch
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW----ASLELRGLE---------------DEYKK  206 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~----~~lilr~~~---------------~~~kp  206 (256)
                      .|+-|++.+.++.|++.|+++.++||.....   +...-++.|+...    ..+.+.+.+               --..-
T Consensus       534 Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~T---A~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv  610 (920)
T 1mhs_A          534 DPPRHDTYKTVCEAKTLGLSIKMLTGDAVGI---ARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEV  610 (920)
T ss_dssp             CCCCHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESC
T ss_pred             ccccccHHHHHHHHhhcCceEEEEcCCCHHH---HHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEe
Confidence            5788999999999999999999999987543   2333355677521    111111100               00001


Q ss_pred             hhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          207 VQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       207 ~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      .|.-|..+-+.+++.| .+++++||..||..+
T Consensus       611 ~P~~K~~iV~~Lq~~g-~~Vam~GDGvNDapa  641 (920)
T 1mhs_A          611 FPQHKYNVVEILQQRG-YLVAMTGDGVNDAPS  641 (920)
T ss_dssp             CSTHHHHHHHHHHTTT-CCCEECCCCGGGHHH
T ss_pred             CHHHHHHHHHHHHhCC-CeEEEEcCCcccHHH
Confidence            2345677778888777 578899999999754

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=95.87  E-value=0.00072  Score=60.12  Aligned_cols=18  Identities=11%  Similarity=-0.021  Sum_probs=15.7

Q ss_pred             CcEEEEecCCCccCChHH
Q 025203          104 KDAWIFDVDDTLLSTIPY  121 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~  121 (256)
                      .++|+||+||||+++...
T Consensus        21 ~kli~fDlDGTLld~~~~   38 (332)
T 1y8a_A           21 GHMFFTDWEGPWILTDFA   38 (332)
T ss_dssp             CCEEEECSBTTTBCCCHH
T ss_pred             ceEEEEECcCCCcCccHH
Confidence            579999999999998753

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=95.09  E-value=0.017  Score=58.39  Aligned_cols=89  Identities=17%  Similarity=0.186  Sum_probs=58.8

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCc---ceEEEecCCC-----------------CCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGW---ASLELRGLED-----------------EYK  205 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~---~~lilr~~~~-----------------~~k  205 (256)
                      .|+-|++.+.++.|++.|+++.++||.....   +...-++.|+..-   ...+...+.+                 -..
T Consensus       487 Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~t---A~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ar  563 (885)
T 3b8c_A          487 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAG  563 (885)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCEEEESSCHHH---HTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEEC
T ss_pred             cccchhHHHHHHHHHHcCCcEEEEcCCChHH---HHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEE
Confidence            5788999999999999999999999987532   2333456787420   1111110000                 000


Q ss_pred             hhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          206 KVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       206 p~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      -.|.-|..+-+.+++.| .+++++||..||..+
T Consensus       564 v~P~~K~~iV~~lq~~g-~~Vam~GDGvNDapa  595 (885)
T 3b8c_A          564 VFPEHKYEIVKKLQERK-HIVGMTGDGVNDAPA  595 (885)
T ss_dssp             CCHHHHHHHHHHHHHTT-CCCCBCCCSSTTHHH
T ss_pred             ECHHHHHHHHHHHHHCC-CeEEEEcCCchhHHH
Confidence            12456777777888777 578899999999754

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=94.71  E-value=0.05  Score=51.05  Aligned_cols=99  Identities=16%  Similarity=0.142  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhc----C--CCCcceEEEecCCCC----------------C---
Q 025203          150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHV----G--YHGWASLELRGLEDE----------------Y---  204 (256)
Q Consensus       150 pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~----G--~~~~~~lilr~~~~~----------------~---  204 (256)
                      |....+|++|++.|.++|++||.+-..-+.+...+-.-    |  ...++++++.....+                +   
T Consensus       189 ~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~l~  268 (470)
T 4g63_A          189 KEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMT  268 (470)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCCEE
T ss_pred             HhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCccc
Confidence            78889999999999999999999887766666665421    2  222355555432110                0   


Q ss_pred             ---ch--hhhhh---HHHHHHHHhcCCcEEEEEcCCc-cccCCC--CCCCcEEEe
Q 025203          205 ---KK--VQQYK---AQVRKRLVKEGYRIWGVVGDQW-SSFEGL--PKPKRTFKL  248 (256)
Q Consensus       205 ---kp--~~~~K---~~~r~~l~~~g~~i~~~iGD~~-sDl~ga--~~g~r~fkl  248 (256)
                         ++  ...|.   .....++....-.-++||||+. +||...  ..|-||+.+
T Consensus       269 ~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~I  323 (470)
T 4g63_A          269 NVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALV  323 (470)
T ss_dssp             ECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEE
T ss_pred             ccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEE
Confidence               00  00222   1122222211112478999997 898765  367788765

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=94.38  E-value=0.038  Score=51.46  Aligned_cols=142  Identities=11%  Similarity=0.124  Sum_probs=74.4

Q ss_pred             CCCCcEEEEecCCCccCChHH--HHH--hccCCCCCCH-H---HHHH------HHHhcCCcchHHHHHHHHHHHHcCCeE
Q 025203          101 GDGKDAWIFDVDDTLLSTIPY--FKK--HGFGGERLNA-S---SWEA------WMKESKAPALEHTLNLFHEIKNRGVKI  166 (256)
Q Consensus       101 ~~~~~avvfDiDgTlldn~~~--~~~--~~~g~~~~~~-~---~~~~------wv~~~~~~~~pg~~ell~~L~~~G~~i  166 (256)
                      ..++..+|+|+|+||+.+..-  ...  ..-+...++. .   .|.-      -...-....-||+.+||+++. +++.|
T Consensus        23 ~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls-~~yEi  101 (442)
T 3ef1_A           23 QEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYEL  101 (442)
T ss_dssp             HTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHT-TTEEE
T ss_pred             hcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHh-CCcEE
Confidence            356889999999999997521  100  0000000000 0   0000      000011455799999999998 68999


Q ss_pred             EEEeCCCcccHHHHHHHHHhcC-CCCcc-eEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCCCCCc
Q 025203          167 FLVSSRRESLRSYTVDNLIHVG-YHGWA-SLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKR  244 (256)
Q Consensus       167 ~ivTnR~~~~r~~T~~~L~~~G-~~~~~-~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g~r  244 (256)
                      ++.|.....+-....+.|.-.| +  +. +++.|.+...    ...| .+.+ +-..+.+-+++|.|+..-+..-  . -
T Consensus       102 vIfTas~~~YA~~Vl~~LDp~~~~--f~~Rl~sRd~cg~----~~~K-dL~~-ll~rdl~~vvIIDd~p~~~~~~--p-N  170 (442)
T 3ef1_A          102 HIYTMGTKAYAKEVAKIIDPTGKL--FQDRVLSRDDSGS----LAQK-SLRR-LFPCDTSMVVVIDDRGDVWDWN--P-N  170 (442)
T ss_dssp             EEECSSCHHHHHHHHHHHCTTSTT--TTTCEECTTTSSC----SSCC-CGGG-TCSSCCTTEEEEESCSGGGTTC--T-T
T ss_pred             EEEcCCCHHHHHHHHHHhccCCcc--ccceEEEecCCCC----ceee-ehHH-hcCCCcceEEEEECCHHHhCCC--C-C
Confidence            9999998776555555555444 2  22 3444654311    0011 1111 1012334588899987655432  2 5


Q ss_pred             EEEecCCCCC
Q 025203          245 TFKLPNSMYY  254 (256)
Q Consensus       245 ~fklPnp~Y~  254 (256)
                      .|.++.-.||
T Consensus       171 ~I~I~~~~fF  180 (442)
T 3ef1_A          171 LIKVVPYEFF  180 (442)
T ss_dssp             EEECCCCCCS
T ss_pred             EEEcCCcccc
Confidence            5555555554

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=93.31  E-value=0.17  Score=43.07  Aligned_cols=39  Identities=13%  Similarity=0.072  Sum_probs=26.0

Q ss_pred             HHHHHHHHhcCC--cEEEEEcCCccccCCCCCCCcEEEecC
Q 025203          212 AQVRKRLVKEGY--RIWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       212 ~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      ..++..++..|.  +.+++|||+.+|+.........+.+-|
T Consensus       205 ~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n  245 (290)
T 3dnp_A          205 AGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGN  245 (290)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred             HHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecC
Confidence            345566666676  359999999999987642224454444

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=93.06  E-value=0.21  Score=42.19  Aligned_cols=39  Identities=13%  Similarity=0.096  Sum_probs=25.2

Q ss_pred             HHHHHHHHhcCCc--EEEEEcCCccccCCCCCCCcEEEecC
Q 025203          212 AQVRKRLVKEGYR--IWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       212 ~~~r~~l~~~g~~--i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      ..+++.++..|..  .+++|||+.+|+.........+...|
T Consensus       200 ~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n  240 (279)
T 4dw8_A          200 LSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGN  240 (279)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred             HHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCC
Confidence            3455555666654  59999999999987642224454444

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=92.66  E-value=0.23  Score=41.73  Aligned_cols=27  Identities=15%  Similarity=0.164  Sum_probs=22.1

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCC
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRR  173 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~  173 (256)
                      .+.+.+.++++.+++.|+.+.+.|+..
T Consensus        85 l~~~~~~~i~~~~~~~~~~~~~~~~~~  111 (261)
T 2rbk_A           85 IPQEEVKAMAAFCEKKGVPCIFVEEHN  111 (261)
T ss_dssp             CCHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCHHHHHHHHHHHHHcCCeEEEEeCCc
Confidence            345889999999999999988887654

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=90.20  E-value=0.27  Score=43.20  Aligned_cols=40  Identities=8%  Similarity=0.056  Sum_probs=30.6

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGY  189 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~  189 (256)
                      .++.|++.++++.|++ |+.+.++|+.....   +...+...|+
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~---~~~~~~~~~~  141 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQY---LRRTASMIGV  141 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHH---HHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEE---Ecccchhhhh
Confidence            4678999999999999 99999999876332   3444555566

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=88.66  E-value=0.75  Score=37.91  Aligned_cols=91  Identities=9%  Similarity=0.048  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHH-Hc-CCeE-----------EEEe-CCCcccHHHHHHHHHhcCCCCcceEEEecCC-----CCCchhhhh
Q 025203          150 EHTLNLFHEIK-NR-GVKI-----------FLVS-SRRESLRSYTVDNLIHVGYHGWASLELRGLE-----DEYKKVQQY  210 (256)
Q Consensus       150 pg~~ell~~L~-~~-G~~i-----------~ivT-nR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-----~~~kp~~~~  210 (256)
                      +.+.++++.++ +. |+.+           .++| +.+   .+...+.++.++  ....++ .+..     ..++|.+  
T Consensus        84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~-~~~~~~ei~~~~~~K~--  155 (231)
T 1wr8_A           84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETIN---VETVREIINELN--LNLVAV-DSGFAIHVKKPWINKG--  155 (231)
T ss_dssp             SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSC---HHHHHHHHHHTT--CSCEEE-ECSSCEEEECTTCCHH--
T ss_pred             HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCC---HHHHHHHHHhcC--CcEEEE-ecCcEEEEecCCCChH--
Confidence            55666666666 44 5543           5555 322   233455555554  233444 3321     1222222  


Q ss_pred             hHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCCcEEEecC
Q 025203          211 KAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPKRTFKLPN  250 (256)
Q Consensus       211 K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~r~fklPn  250 (256)
                       ..++..++..|.  +.+++|||+.+|+..+. +|.. +.+.|
T Consensus       156 -~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~-v~~~~  196 (231)
T 1wr8_A          156 -SGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQ  196 (231)
T ss_dssp             -HHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTT
T ss_pred             -HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEecC
Confidence             233444444454  45899999999998864 4543 55554

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=88.61  E-value=1.2  Score=37.10  Aligned_cols=27  Identities=15%  Similarity=0.230  Sum_probs=22.3

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCC
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRR  173 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~  173 (256)
                      -+.+.+.++++.+++.|+.+.+.|+..
T Consensus        82 ~~~~~~~~i~~~~~~~~~~~~~~~~~~  108 (258)
T 2pq0_A           82 LRREKVRALTEEAHKNGHPLVFMDAEK  108 (258)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CCHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence            345888999999999999998887654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=86.50  E-value=0.69  Score=38.72  Aligned_cols=40  Identities=10%  Similarity=-0.056  Sum_probs=28.2

Q ss_pred             HHHHHHHHhcCC----cEEEEEcCCccccCCCCCCCcEEEecCC
Q 025203          212 AQVRKRLVKEGY----RIWGVVGDQWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       212 ~~~r~~l~~~g~----~i~~~iGD~~sDl~ga~~g~r~fklPnp  251 (256)
                      ..+++.++..|.    +.+++|||+.+|+.........+.+.|.
T Consensus       179 ~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na  222 (259)
T 3zx4_A          179 RAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRG  222 (259)
T ss_dssp             HHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSS
T ss_pred             HHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCCh
Confidence            345555666676    5699999999999887544456666664

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=84.94  E-value=1.5  Score=36.36  Aligned_cols=38  Identities=13%  Similarity=0.100  Sum_probs=25.4

Q ss_pred             HHHHHHHhcCCc--EEEEEcCCccccCCCCCCCcEEEecC
Q 025203          213 QVRKRLVKEGYR--IWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       213 ~~r~~l~~~g~~--i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      .+++.++..|..  .+++|||+.+|+.........|...|
T Consensus       204 ~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n  243 (274)
T 3fzq_A          204 AIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKN  243 (274)
T ss_dssp             HHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETT
T ss_pred             HHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecC
Confidence            455555666654  59999999999998643335555544

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=84.81  E-value=0.38  Score=40.72  Aligned_cols=87  Identities=16%  Similarity=0.110  Sum_probs=46.1

Q ss_pred             HHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-----CCCchhhhhhHHHHHHHHhcCC--cEEEEEcC
Q 025203          159 IKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-----DEYKKVQQYKAQVRKRLVKEGY--RIWGVVGD  231 (256)
Q Consensus       159 L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-----~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD  231 (256)
                      +++.++++.++|+...  .....+.|.+. +......+.....     ..+++.+   ..+...++..|.  +.+++|||
T Consensus       142 ~~~~~~ki~i~~~~~~--~~~~~~~l~~~-~~~~~~~~~s~~~~~ei~~~~~~K~---~~~~~l~~~l~i~~~~~~~~GD  215 (271)
T 1rlm_A          142 IDDVLFKFSLNLPDEQ--IPLVIDKLHVA-LDGIMKPVTSGFGFIDLIIPGLHKA---NGISRLLKRWDLSPQNVVAIGD  215 (271)
T ss_dssp             CCSCEEEEEEECCGGG--HHHHHHHHHHH-TTTSSEEEECSTTEEEEECTTCSHH---HHHHHHHHHHTCCGGGEEEEEC
T ss_pred             CCCceEEEEEEcCHHH--HHHHHHHHHHH-cCCcEEEEeccCCeEEEEcCCCChH---HHHHHHHHHhCCCHHHEEEECC
Confidence            3456889999887643  22334444421 3222333333311     1111111   234444455564  45999999


Q ss_pred             CccccCCCCCCCcEEEecCC
Q 025203          232 QWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       232 ~~sDl~ga~~g~r~fklPnp  251 (256)
                      +.+|+.........+.+.|.
T Consensus       216 ~~nD~~m~~~ag~~va~~na  235 (271)
T 1rlm_A          216 SGNDAEMLKMARYSFAMGNA  235 (271)
T ss_dssp             SGGGHHHHHHCSEEEECTTC
T ss_pred             cHHHHHHHHHcCCeEEeCCc
Confidence            99999886532345666554

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=80.85  E-value=0.67  Score=42.22  Aligned_cols=21  Identities=33%  Similarity=0.468  Sum_probs=18.2

Q ss_pred             CcEEEEecCCCccCChHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKK  124 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~  124 (256)
                      .+.|+||+||+++|-..||.-
T Consensus         1 ~~~~~fdvdgv~~~~~~~~d~   21 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEERCFDV   21 (384)
T ss_dssp             CCEEEECSBTTTBCSHHHHHH
T ss_pred             CceEEEecCceeechhhhccH
Confidence            368999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	256
d2b82a1	209	c.108.1.12 (A:4-212) Class B acid phosphatase, Aph	1e-23
d1ltqa1	149	c.108.1.9 (A:153-301) Polynucleotide kinase, phosp	2e-07

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} Length = 209

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

 Score = 92.7 bits (230), Expect = 1e-23
 Identities = 33/169 (19%), Positives = 50/169 (29%), Gaps = 20/169 (11%)

Query: 98  SLAGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNAS---SWEAWMK-----ESKAPAL 149
           SLAG    A  FD+DDT+L + P F +        +     +   W K     +  +   
Sbjct: 29  SLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPK 88

Query: 150 EHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIH-VGYHGWASLELRGLEDEYKKVQ 208
           E    L      RG  IF V+ R  +        L             +    D+  +  
Sbjct: 89  EVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQ-- 146

Query: 209 QYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP----KPKRTFKLPNSMY 253
                  K    +   I    GD  +          +  R  +  NS Y
Sbjct: 147 -----NTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY 190

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Length = 149

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

 Score = 47.0 bits (111), Expect = 2e-07
 Identities = 20/140 (14%), Positives = 34/140 (24%), Gaps = 22/140 (15%)

Query: 106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVK 165
           A IFDVD TL                          K          + L       G +
Sbjct: 9   AVIFDVDGTLAKMNGR--------------GPYDLEKCDTDVINPMVVELSKMYALMGYQ 54

Query: 166 IFLVSSRRESLRSYTVDNL-------IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRL 218
           I +VS R    +                +          R   D  K     + ++  + 
Sbjct: 55  IVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKE-EIFWKH 113

Query: 219 VKEGYRIWGVVGDQWSSFEG 238
           +   + +   + D+    E 
Sbjct: 114 IAPHFDVKLAIDDRTQVVEM 133

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	256
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	99.94
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.83
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.68
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.65
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.61
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.56
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.54
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.53
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.53
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.5
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.49
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.44
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.42
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.42
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.41
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.41
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.4
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.36
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.35
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.32
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.31
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.31
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.31
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.29
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.22
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	99.17
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.16
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.12
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	99.08
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	98.91
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.87
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.84
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	98.53
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.52
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.52
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.5
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	98.42
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.4
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.38
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.3
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	98.29
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.28
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	98.23
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	98.23
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	98.19
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	98.18
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.15
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.15
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.15
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.08
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	97.95
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	97.87
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	97.83
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	97.77
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	97.74
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.72
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	96.44
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	93.62
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	90.91
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	87.93
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	86.31

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=3.2e-28  Score=204.82  Aligned_cols=146  Identities=23%  Similarity=0.217  Sum_probs=113.1

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhc--cC--CC--CCCHHHHHHHHHh--cCCcchHHHHHHHHHHHHcCCeEEEEeC
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHG--FG--GE--RLNASSWEAWMKE--SKAPALEHTLNLFHEIKNRGVKIFLVSS  171 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~--~g--~~--~~~~~~~~~wv~~--~~~~~~pg~~ell~~L~~~G~~i~ivTn  171 (256)
                      ++.+|.|||||||||+|||+||+....  +.  +.  .++++.|.+|...  ..+.|+||+++|+++++++|++||||||
T Consensus        31 ~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~~Gv~IfyVTn  110 (209)
T d2b82a1          31 AGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTG  110 (209)
T ss_dssp             TTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHHcCCeEEEEeC
Confidence            455567999999999999999976532  22  22  2478899888764  5578899999999999999999999999


Q ss_pred             CCcccHHHHHHHHHh-cCCCCc--ceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCCC-C---CCc
Q 025203          172 RRESLRSYTVDNLIH-VGYHGW--ASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGLP-K---PKR  244 (256)
Q Consensus       172 R~~~~r~~T~~~L~~-~G~~~~--~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~-~---g~r  244 (256)
                      |++..++.|.+||++ +|++..  .++++++.. .      +|...|+.+++  |+|++++||+++||.++. +   +.|
T Consensus       111 R~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~-~------~K~~rr~~Ik~--y~I~l~~GD~l~Df~aA~eagi~~iR  181 (209)
T d2b82a1         111 RSPTKTETVSKTLADNFHIPATNMNPVIFAGDK-P------GQNTKSQWLQD--KNIRIFYGDSDNDITAARDVGARGIR  181 (209)
T ss_dssp             SCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-T------TCCCSHHHHHH--TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred             CchhhHHHHHHHHHHHcCCCcccccceEeeCCC-C------CchHHHHHHHH--cCeEEEecCCHHHHhHHHHcCCCceE
Confidence            999999999999965 899754  467777543 1      23345666643  899999999999998752 3   456


Q ss_pred             EEEecCCCCC
Q 025203          245 TFKLPNSMYY  254 (256)
Q Consensus       245 ~fklPnp~Y~  254 (256)
                      +++.||++|-
T Consensus       182 i~r~~~s~y~  191 (209)
T d2b82a1         182 ILRASNSTYK  191 (209)
T ss_dssp             CCCCTTCSSC
T ss_pred             eeccCCCCCC
Confidence            6666888773

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.83  E-value=1.9e-21  Score=153.38  Aligned_cols=132  Identities=16%  Similarity=0.065  Sum_probs=102.6

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      .++++|||||||||+++.+.        ..|+      |.......++||+.++++.|+++|++|+++|||++..+..|.
T Consensus         5 ~kpk~vifDiDgTL~~~~~~--------~~~~------~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~   70 (149)
T d1ltqa1           5 GKPKAVIFDVDGTLAKMNGR--------GPYD------LEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPT   70 (149)
T ss_dssp             TSCEEEEEETBTTTBCCSSC--------CTTC------GGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTT
T ss_pred             CCCcEEEEEcCCCcEeCCCC--------CcCC------ccccccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHH
Confidence            56789999999999998642        1222      333346889999999999999999999999999998888898


Q ss_pred             HHHHhcC-------CCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCCC-CCCCcEEEe
Q 025203          182 DNLIHVG-------YHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       182 ~~L~~~G-------~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      ++|+..+       ...+..+..+.... .+|+...|..+.+.+...+++++++|||+++|++++ .+|.++|.+
T Consensus        71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V  144 (149)
T d1ltqa1          71 KYYRMTRKWVEDIAGVPLVMQCQREQGD-TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV  144 (149)
T ss_dssp             HHHHHHHHHHHHTTCCCCSEEEECCTTC-CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred             HHHHHHhhhhhhcCCCcEEEeecccccc-cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEe
Confidence            9887632       12134455555543 345667887777777777889999999999999998 479999987

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.68  E-value=3.6e-17  Score=134.25  Aligned_cols=103  Identities=13%  Similarity=0.087  Sum_probs=80.1

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++||+.++|+.|+++|++++++||+++.    +.+.|+++|+..++..++.++ ....||.+....   ..+++.|
T Consensus        79 ~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~----~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~---~~~~~~~  151 (204)
T d2go7a1          79 AQVVLMPGAREVLAWADESGIQQFIYTHKGNN----AFTILKDLGVESYFTEILTSQSGFVRKPSPEAAT---YLLDKYQ  151 (204)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHH---HHHHHHT
T ss_pred             ccCcccchHHhhhhcccccccchhhhcccchh----hhhhhhhcccccccccccccccccccchhHHHHH---HHHHHhC
Confidence            34678999999999999999999999998653    456789999999877777654 356677774443   3334445


Q ss_pred             C--cEEEEEcCCccccCCCC-CCCcEEEecCCCC
Q 025203          223 Y--RIWGVVGDQWSSFEGLP-KPKRTFKLPNSMY  253 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga~-~g~r~fklPnp~Y  253 (256)
                      .  +.+++|||+.+|+.+|. +|.+++.+.++.|
T Consensus       152 ~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~  185 (204)
T d2go7a1         152 LNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY  185 (204)
T ss_dssp             CCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC
T ss_pred             CCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCC
Confidence            4  56999999999999985 7999998877654

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=4.1e-16  Score=128.74  Aligned_cols=101  Identities=14%  Similarity=0.003  Sum_probs=78.9

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||.+..   .+...++..|+..+++.++..+ ....||.+....   ..+++.|.
T Consensus        86 ~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~---~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~---~~~~~l~~  159 (218)
T d1te2a_          86 TRPLLPGVREAVALCKEQGLLVGLASASPLH---MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYL---DCAAKLGV  159 (218)
T ss_dssp             HCCBCTTHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHH---HHHHHHTS
T ss_pred             cccccchHHHHHHHhhhcccccccccccccc---ccccccccccccccccccccccccccchhhHHHHH---HHHHHcCC
Confidence            4678999999999999999999999998654   3678888999988776566554 356788775443   33344454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                        +.+++|||+.+|+.++ .+|.+++.++++
T Consensus       160 ~~~~~l~igD~~~di~aA~~~G~~~i~v~~~  190 (218)
T d1te2a_         160 DPLTCVALEDSVNGMIASKAARMRSIVVPAP  190 (218)
T ss_dssp             CGGGEEEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred             CchhcEEEeeCHHHHHHHHHcCCEEEEECCC
Confidence              4589999999999988 479999988765

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.61  E-value=1.2e-15  Score=123.99  Aligned_cols=140  Identities=17%  Similarity=0.127  Sum_probs=99.6

Q ss_pred             CCcEEEEecCCCccCChHHHHHhc------cCCCCCCH--------------------------HHHHHHHH--hcCCcc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHG------FGGERLNA--------------------------SSWEAWMK--ESKAPA  148 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~------~g~~~~~~--------------------------~~~~~wv~--~~~~~~  148 (256)
                      +.++||||+||||+|+.+.+....      +|. .++.                          +.|.+...  ....++
T Consensus         2 ~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (187)
T d2fi1a1           2 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGI-TQDHDSVYQALKVSTPFAIETFAPNLENFLEKYKENEARELEHPIL   80 (187)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHCHHHHHHHHCTTCTTHHHHHHHHHHHHTTSCCB
T ss_pred             CCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCC-CccHHHHHhhhhccchhhhhhhhHHHHHHHHHHHHHHHHHhhcCcc
Confidence            357999999999999766544321      221 1111                          11211111  246788


Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCCcEEE
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGYRIWG  227 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~~i~~  227 (256)
                      +||+.++|+.|+++|++++++||+++.    +.+.|++.|+..++..++.++. ...||++...   ...++..+.+.++
T Consensus        81 ~~gv~~~l~~l~~~g~~~~i~Sn~~~~----~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~---~~~~~~~~~~~~l  153 (187)
T d2fi1a1          81 FEGVSDLLEDISNQGGRHFLVSHRNDQ----VLEILEKTSIAAYFTEVVTSSSGFKRKPNPESM---LYLREKYQISSGL  153 (187)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEECSSCTH----HHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHH---HHHHHHTTCSSEE
T ss_pred             cchhHHHHHHHHhhhccccccccCccc----hhhhhhhhccccccccccccccccccCCCHHHH---HHHHHHcCCCCeE
Confidence            999999999999999999999998653    4567888999888766666554 5677877443   3444556777799


Q ss_pred             EEcCCccccCCC-CCCCcEEEecC
Q 025203          228 VVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       228 ~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                      +|||+..|+++| .+|.+++.+..
T Consensus       154 ~vgDs~~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         154 VIGDRPIDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             EEESSHHHHHHHHHTTCEEEECSC
T ss_pred             EEeCCHHHHHHHHHcCCEEEEECC
Confidence            999999999998 58999988754

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.56  E-value=4.1e-15  Score=122.36  Aligned_cols=104  Identities=13%  Similarity=0.014  Sum_probs=76.9

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++||+.++++.|+++|++++++||.+..   .+...|+++|+..++..+.... ....||.+.........+ ...
T Consensus        92 ~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~---~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~-~~~  167 (224)
T d2hsza1          92 NISRLYPNVKETLEALKAQGYILAVVTNKPTK---HVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKF-GLY  167 (224)
T ss_dssp             SSCEECTTHHHHHHHHHHTTCEEEEECSSCHH---HHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHH-TCC
T ss_pred             cccchHHHHHHHHHHHhccCCcccccccccHH---HHHHHHHhcCchhhccccccccccccccccchhhHHHHHHh-hhh
Confidence            35678999999999999999999999998754   3677889999988765555544 455666664433333222 123


Q ss_pred             CcEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          223 YRIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       223 ~~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .+.+++|||+.+|+.+|. +|.+++-+.++
T Consensus       168 ~~~~~~igD~~~Di~~A~~aG~~~i~v~~g  197 (224)
T d2hsza1         168 PKQILFVGDSQNDIFAAHSAGCAVVGLTYG  197 (224)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred             hhccchhcCcHHHHHHHHHcCCeEEEEeCC
Confidence            345999999999999984 78888888654

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.54  E-value=6.5e-15  Score=121.62  Aligned_cols=99  Identities=13%  Similarity=0.073  Sum_probs=76.7

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++||+.++++.|+++|++++++||+..     ....|+..|+..++..++.+++ ...||.+...   .+.++..|.
T Consensus        89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~-----~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~---~~~l~~~~i  160 (221)
T d1o08a_          89 PADVYPGILQLLKDLRSNKIKIALASASKN-----GPFLLERMNLTGYFDAIADPAEVAASKPAPDIF---IAAAHAVGV  160 (221)
T ss_dssp             GGGBCTTHHHHHHHHHHTTCEEEECCSCTT-----HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHH---HHHHHHTTC
T ss_pred             cccccCCceeccccccccccceEEEeecch-----hhHHHHhhccccccccccccccccccccChHHH---HHHHHHcCC
Confidence            457899999999999999999999999743     3567788899888766665544 5578877443   345555554


Q ss_pred             c--EEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          224 R--IWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       224 ~--i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      +  .+++|||+..|+.+|. +|.+++.+++|
T Consensus       161 ~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~  191 (221)
T d1o08a_         161 APSESIGLEDSQAGIQAIKDSGALPIGVGRP  191 (221)
T ss_dssp             CGGGEEEEESSHHHHHHHHHHTCEEEEESCH
T ss_pred             CCceEEEEecCHHHHHHHHHcCCEEEEECCh
Confidence            3  5899999999999984 79999988754

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.53  E-value=2.7e-15  Score=123.22  Aligned_cols=139  Identities=17%  Similarity=0.145  Sum_probs=97.4

Q ss_pred             CcEEEEecCCCccCChHHHHHh------ccCCCC---------------------CCHH-------HHHHHHHh--cCCc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH------GFGGER---------------------LNAS-------SWEAWMKE--SKAP  147 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~------~~g~~~---------------------~~~~-------~~~~wv~~--~~~~  147 (256)
                      .++|+||+||||+|+.+.+...      .+|.+.                     ....       .+.++...  ...+
T Consensus         3 ~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (207)
T d2hdoa1           3 YQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIE   82 (207)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHHTTCCGGGHHHHHHHHHHHHTTCGGGCE
T ss_pred             CcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhhhccccchhhHHHHHHHhhhhhcccccccc
Confidence            4799999999999998866542      122110                     0111       12222222  3578


Q ss_pred             chHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC--c
Q 025203          148 ALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY--R  224 (256)
Q Consensus       148 ~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~--~  224 (256)
                      ++||+.++++.|++ +++++++||...   ..+...|+++|+..++..+...+ ....||++...   ...+++.|.  +
T Consensus        83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~---~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~---~~~~~~~~~~~~  155 (207)
T d2hdoa1          83 LYPGITSLFEQLPS-ELRLGIVTSQRR---NELESGMRSYPFMMRMAVTISADDTPKRKPDPLPL---LTALEKVNVAPQ  155 (207)
T ss_dssp             ECTTHHHHHHHSCT-TSEEEEECSSCH---HHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHH---HHHHHHTTCCGG
T ss_pred             cccchhhhhhhhcc-cccccccccccc---cccccccccccccccccccccccccccchhhhhhh---cccccceeeecc
Confidence            99999999999975 799999999864   44788899999988776666654 45677877443   344445554  4


Q ss_pred             EEEEEcCCccccCCC-CCCCcEEEec
Q 025203          225 IWGVVGDQWSSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       225 i~~~iGD~~sDl~ga-~~g~r~fklP  249 (256)
                      .+++|||+.+|+.+| .+|.+++.++
T Consensus       156 ~~l~VgDs~~Di~~a~~aG~~~i~v~  181 (207)
T d2hdoa1         156 NALFIGDSVSDEQTAQAANVDFGLAV  181 (207)
T ss_dssp             GEEEEESSHHHHHHHHHHTCEEEEEG
T ss_pred             ceeEecCCHHHHHHHHHcCCeEEEEe
Confidence            588999999999987 4788888764

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=1.1e-14  Score=116.64  Aligned_cols=134  Identities=10%  Similarity=0.012  Sum_probs=90.3

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCC----HHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLN----ASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRS  178 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~----~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~  178 (256)
                      -|++||||+||||+++..+.  +  +..++.    ....+.  ......++||+.++|++|+++|++++++||+++.  .
T Consensus         4 ~pK~viFDlDGTL~d~~~~~--~--~~~~~~~~~~~~~~d~--~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~--~   75 (164)
T d1u7pa_           4 LPKLAVFDLDYTLWPFWVDT--H--VDPPFHKSSDGTVRDR--RGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEI--Q   75 (164)
T ss_dssp             CCSEEEECCBTTTBSSCTTT--T--CCSCEEECTTSCEEET--TCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCH--H
T ss_pred             CCCEEEEcCCCcccCCcccc--c--cCccHhHHhcchHhhh--hccccccchHHHHHHHHHHHCCCcEEEEeccccc--h
Confidence            36899999999999875321  1  111110    000000  0123578999999999999999999999987653  2


Q ss_pred             HHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          179 YTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       179 ~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .....++.+++..++..+....    ||.+...   .+.+++.|  .+.+++|||+..|++++ .+|.+++.+|+.
T Consensus        76 ~~~~~l~~~~~~~~~~~~~~~~----kp~~~~~---~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G  144 (164)
T d1u7pa_          76 GANQLLELFDLGKYFIQREIYP----GSKVTHF---ERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDG  144 (164)
T ss_dssp             HHHHHHHHTTCGGGCSEEEESS----SCHHHHH---HHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSC
T ss_pred             hhccchhcccccccceeeeccc----CCChHHH---HHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            3456678888877766554432    3444322   23344444  45699999999999988 589999999876

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.50  E-value=3.3e-14  Score=120.23  Aligned_cols=98  Identities=13%  Similarity=0.067  Sum_probs=72.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...++||+.++|+.|+++|++++++||.+...   ....|+.+|+..++ ..++.++ ....||++...   .+.+++.|
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~---~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~---~~~~~~l~  170 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREM---MDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMC---YKNAMELG  170 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHH---HHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHH---HHHHHHHT
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhh---HHHHHHHHhhcccccccccccccccccccChHHH---HHHHHHhC
Confidence            45799999999999999999999999987654   55666666766653 4444443 45678887433   23444445


Q ss_pred             C---cEEEEEcCCccccCCCC-CCCcEEEe
Q 025203          223 Y---RIWGVVGDQWSSFEGLP-KPKRTFKL  248 (256)
Q Consensus       223 ~---~i~~~iGD~~sDl~ga~-~g~r~fkl  248 (256)
                      .   +.+++|||+.+|+.+|. +|++++-+
T Consensus       171 ~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v  200 (257)
T d1swva_         171 VYPMNHMIKVGDTVSDMKEGRNAGMWTVGV  200 (257)
T ss_dssp             CCSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred             CCCcceEEEEeCChhhHHHHHHCCCEEEEE
Confidence            3   45899999999999984 79998865

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.49  E-value=1.1e-14  Score=121.93  Aligned_cols=126  Identities=12%  Similarity=0.059  Sum_probs=84.7

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc-------
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE-------  174 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~-------  174 (256)
                      .+.+||+||.||||..+..|..         ++         .+..++||+.++|++|+++|++++++||++.       
T Consensus        21 ~~~~Aif~DrDGtl~~~~~y~~---------~~---------~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~   82 (209)
T d2o2xa1          21 PHLPALFLDRDGTINVDTDYPS---------DP---------AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFG   82 (209)
T ss_dssp             SSCCCEEECSBTTTBCCCSCTT---------CG---------GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCC
T ss_pred             CCCCEEEEeCCCCeECCCCCCC---------CH---------HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhh
Confidence            3468999999999988654321         11         1356899999999999999999999999752       


Q ss_pred             -----ccHHHHHHHHHhcCCCCcceEEEecCC------------CCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccc
Q 025203          175 -----SLRSYTVDNLIHVGYHGWASLELRGLE------------DEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSS  235 (256)
Q Consensus       175 -----~~r~~T~~~L~~~G~~~~~~lilr~~~------------~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sD  235 (256)
                           ...+...+.|+..|.. .+.++.....            ..+||.+..   +.+.+++.+.  ..+++|||+.+|
T Consensus        83 ~~~~~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~m---l~~a~~~~~i~~~~~~~VGD~~~D  158 (209)
T d2o2xa1          83 WSAFAAVNGRVLELLREEGVF-VDMVLACAYHEAGVGPLAIPDHPMRKPNPGM---LVEAGKRLALDLQRSLIVGDKLAD  158 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCC-CSEEEEECCCTTCCSTTCCSSCTTSTTSCHH---HHHHHHHHTCCGGGCEEEESSHHH
T ss_pred             hhhhhhhhhHHHHHhhhcccc-cceEEEecccccccccccccccccccccchh---hhHhHHHhCCCccceEEeCCCHHH
Confidence                 1112234556677764 2333333321            124776633   3344444454  458999999999


Q ss_pred             cCCC-CCCCcEEEec
Q 025203          236 FEGL-PKPKRTFKLP  249 (256)
Q Consensus       236 l~ga-~~g~r~fklP  249 (256)
                      +++| .+|++++.+-
T Consensus       159 i~aA~~AGi~~i~v~  173 (209)
T d2o2xa1         159 MQAGKRAGLAQGWLV  173 (209)
T ss_dssp             HHHHHHTTCSEEEEE
T ss_pred             HHHHHHCCCcEEEEe
Confidence            9988 4888887663

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.44  E-value=5.4e-14  Score=116.83  Aligned_cols=101  Identities=14%  Similarity=0.167  Sum_probs=73.4

Q ss_pred             CCcchHHHHHHHHHHHHcC-CeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRG-VKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G-~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ..+++||+.++|+.|+++| ++++++||.+..   .....|+..|+..++..+...++ ...||.+.......+.+...|
T Consensus        89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~---~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~  165 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEA---SGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGAN  165 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHH---HHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCC
T ss_pred             CceecCchHHHHhhhhccccccccccCCCcch---hhhhhhhhhcccccccccccccccccccchhHHHHHHhhhhcccC
Confidence            4578899999999999997 899999999754   36788899999888766665543 444555432211222222224


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEe
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fkl  248 (256)
                      .  +.+++|||+++|+.+| .+|.+++.+
T Consensus       166 ~~p~~~l~VGD~~~Di~aA~~aG~~~i~v  194 (228)
T d2hcfa1         166 YSPSQIVIIGDTEHDIRCARELDARSIAV  194 (228)
T ss_dssp             CCGGGEEEEESSHHHHHHHHTTTCEEEEE
T ss_pred             CChhHheeecCChHHHHHHHHcCCEEEEE
Confidence            3  4599999999999987 589988765

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.42  E-value=8e-14  Score=114.04  Aligned_cols=138  Identities=15%  Similarity=0.199  Sum_probs=93.0

Q ss_pred             CCcEEEEecCCCccCChHHHHHh------ccCCC---------------------CCCHH-------HHHHHHHh---cC
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKH------GFGGE---------------------RLNAS-------SWEAWMKE---SK  145 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~------~~g~~---------------------~~~~~-------~~~~wv~~---~~  145 (256)
                      ..++|+||+||||+++.+.+...      .+|..                     .+...       .+..+...   ..
T Consensus         3 ~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (210)
T d2ah5a1           3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYE   82 (210)
T ss_dssp             TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSCGGGHHHHHHHHHHHHHHTGGGS
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccccchhhHHHHHHHHHHHHhhhhhc
Confidence            46899999999999987654321      12211                     11111       22222222   45


Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCCc
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGYR  224 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~~  224 (256)
                      .+++|++.++++.++.+| +++++||.+...   ....|+++|+..++..+.... ..+.+|..     ....++..|.+
T Consensus        83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~---~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~-----~~~~~~~~~~~  153 (210)
T d2ah5a1          83 AQLFPQIIDLLEELSSSY-PLYITTTKDTST---AQDMAKNLEIHHFFDGIYGSSPEAPHKADV-----IHQALQTHQLA  153 (210)
T ss_dssp             CEECTTHHHHHHHHHTTS-CEEEEEEEEHHH---HHHHHHHTTCGGGCSEEEEECSSCCSHHHH-----HHHHHHHTTCC
T ss_pred             ccchhHHHHHHhhhhccc-chhhcccccchh---hhHHHHhhcccccccccccccccccccccc-----cchhhhhhhcc
Confidence            788999999999998775 899999987543   677889999988765555443 33333332     33445555654


Q ss_pred             --EEEEEcCCccccCCCC-CCCcEEEec
Q 025203          225 --IWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       225 --i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                        .+++|||+.+|+.+|. +|.+++-+.
T Consensus       154 ~~~~v~VGDs~~Di~aa~~aGi~~i~v~  181 (210)
T d2ah5a1         154 PEQAIIIGDTKFDMLGARETGIQKLAIT  181 (210)
T ss_dssp             GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred             cccceeecCCHHHHHHHHHcCCeEEEEc
Confidence              5999999999999984 789988875

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.42  E-value=2.2e-13  Score=111.78  Aligned_cols=100  Identities=15%  Similarity=0.052  Sum_probs=75.9

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEec-CCCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRG-LEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~-~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++++.++++|++++++||.....   ....+++.|+..++..++.+ +....||++......   +++.|
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~---~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~---~~~~g  163 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS---IDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELA---EQALG  163 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHH---HHHHT
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchHHHH---HHHHHhhccccccccceeeeeeeeccccHHHHHHHH---HHHhC
Confidence            457789999999999999999999999987543   56677777887765555554 446678888554333   33345


Q ss_pred             C--cEEEEEcCCccccCCCC-CCCcEEEec
Q 025203          223 Y--RIWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                      .  +.+++|||+.+|+.+|. +|.+++.+.
T Consensus       164 ~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~  193 (220)
T d1zrna_         164 LDRSAILFVASNAWDATGARYFGFPTCWIN  193 (220)
T ss_dssp             SCGGGEEEEESCHHHHHHHHHHTCCEEEEC
T ss_pred             CCCceEEEEecChHhHHHHHHcCCEEEEEc
Confidence            4  46999999999999984 799988774

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.2e-12  Score=109.11  Aligned_cols=107  Identities=20%  Similarity=0.187  Sum_probs=70.2

Q ss_pred             hcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc----eEEEecCC-----CCCch--hhhhh
Q 025203          143 ESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA----SLELRGLE-----DEYKK--VQQYK  211 (256)
Q Consensus       143 ~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~----~lilr~~~-----~~~kp--~~~~K  211 (256)
                      .....+.||+.+++++|+++|++++++|+..+..   ....++.+|++.++    ++-...++     ....|  ....|
T Consensus        78 ~~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~---v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K  154 (217)
T d1nnla_          78 EQPPHLTPGIRELVSRLQERNVQVFLISGGFRSI---VEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGK  154 (217)
T ss_dssp             HSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHH
T ss_pred             hhccccCHHHHHHHHHHHhCCCEEEEECCCchHH---HHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchH
Confidence            3556788999999999999999999999987543   67777889998532    11111111     01112  22335


Q ss_pred             HHHHHHHH-hcCCcEEEEEcCCccccCCCCCCCcEEEe-cCCC
Q 025203          212 AQVRKRLV-KEGYRIWGVVGDQWSSFEGLPKPKRTFKL-PNSM  252 (256)
Q Consensus       212 ~~~r~~l~-~~g~~i~~~iGD~~sDl~ga~~g~r~fkl-Pnp~  252 (256)
                      ....+.++ ..+++.+++|||+.+|+..+......|.+ |||.
T Consensus       155 ~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~  197 (217)
T d1nnla_         155 GKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVI  197 (217)
T ss_dssp             HHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCC
T ss_pred             HHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHH
Confidence            44444443 34677799999999999988643344544 6653

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=8.7e-14  Score=113.31  Aligned_cols=123  Identities=14%  Similarity=0.088  Sum_probs=80.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccH------
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLR------  177 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r------  177 (256)
                      .+||+||+||||....+|.         .+.         ....++||+.++++.|+++|++++++||++...+      
T Consensus         2 ~~Av~~DrDGtl~~~~~y~---------~~~---------~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~   63 (182)
T d2gmwa1           2 VPAIFLDRDGTINVDHGYV---------HEI---------DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEA   63 (182)
T ss_dssp             BCEEEECSBTTTBCCCSSC---------CSG---------GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHH
T ss_pred             CCEEEEeCCCCccCCCCCC---------CCH---------HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHH
Confidence            4799999999998754431         111         2356899999999999999999999999874211      


Q ss_pred             ------HHHHHHHHhcCCCCcceEEEecC------------CCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccC
Q 025203          178 ------SYTVDNLIHVGYHGWASLELRGL------------EDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFE  237 (256)
Q Consensus       178 ------~~T~~~L~~~G~~~~~~lilr~~------------~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~  237 (256)
                            ......+...|.. .......+.            ...+||.+..   +...+++.+  ...+++|||+++|++
T Consensus        64 ~~~~~~~~~~~~~~~~~~~-~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m---~~~~~~~~~i~~~~s~mVGDs~~Di~  139 (182)
T d2gmwa1          64 QFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGM---LLSARDYLHIDMAASYMVGDKLEDMQ  139 (182)
T ss_dssp             HHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSCCSSSTTSCHH---HHHHHHHHTBCGGGCEEEESSHHHHH
T ss_pred             hhhhhhhhhhhhhhhhccc-ccceeecccccccccccccccccccCCcccc---ccchhhhcccccccccccCCCHHHHH
Confidence                  1122334455554 344444332            1235776633   344444444  345899999999999


Q ss_pred             CC-CCCCcE-EEe
Q 025203          238 GL-PKPKRT-FKL  248 (256)
Q Consensus       238 ga-~~g~r~-fkl  248 (256)
                      +| .+|+.+ +.+
T Consensus       140 aA~~Ag~~~~~lv  152 (182)
T d2gmwa1         140 AAVAANVGTKVLV  152 (182)
T ss_dssp             HHHHTTCSEEEEE
T ss_pred             HHHHhCCCcEEEE
Confidence            87 478765 444

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=2.1e-14  Score=115.51  Aligned_cols=126  Identities=13%  Similarity=0.152  Sum_probs=82.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc-----c--
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES-----L--  176 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~-----~--  176 (256)
                      +++|+||.||||....++.         +....+      .+..++||+.++|+.|+++|++++++||.+.-     .  
T Consensus         2 ~K~i~~D~DGtL~~~~~~~---------~~~~~~------~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~   66 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSD---------FQVDRF------DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQA   66 (161)
T ss_dssp             CEEEEECCBTTTBCCC--C---------CCCCSG------GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHH
T ss_pred             CcEEEEeCCCCeEeeCCCC---------CccCCH------HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHH
Confidence            5899999999999876431         111111      24678999999999999999999999997621     1  


Q ss_pred             -----HHHHHHHHHhcCCCCcceEEEecC-----CCCCchhhhhhHHHHHHHHhcCC--cEEEEEcCCccccCCCC-CCC
Q 025203          177 -----RSYTVDNLIHVGYHGWASLELRGL-----EDEYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQWSSFEGLP-KPK  243 (256)
Q Consensus       177 -----r~~T~~~L~~~G~~~~~~lilr~~-----~~~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~sDl~ga~-~g~  243 (256)
                           .....+.|...|+. .+.+++...     ...+||.+...   .+.+++.|.  ..+++|||+++|+++|. +|+
T Consensus        67 ~~~~~~~~l~~~l~~~~~~-~~~i~~~~~~~~~~~~~~KP~p~~~---~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~  142 (161)
T d2fpwa1          67 DFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECDCRKPKVKLV---ERYLAEQAMDRANSYVIGDRATDIQLAENMGI  142 (161)
T ss_dssp             HHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCSSSTTSSGGG---GGGC----CCGGGCEEEESSHHHHHHHHHHTS
T ss_pred             Hhhhhhhhhhhhccccccc-cceeeeccccccccccccccccHHH---HHHHHhcCCChhcEEEECCCHHHHHHHHHcCC
Confidence                 11234566777775 344444432     13357777443   233333343  45999999999999984 788


Q ss_pred             cEEEe
Q 025203          244 RTFKL  248 (256)
Q Consensus       244 r~fkl  248 (256)
                      +++.+
T Consensus       143 ~~i~i  147 (161)
T d2fpwa1         143 NGLRY  147 (161)
T ss_dssp             EEEEC
T ss_pred             eEEEE
Confidence            87765

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=1.7e-12  Score=108.49  Aligned_cols=98  Identities=11%  Similarity=0.141  Sum_probs=72.4

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce-EEEecCCCCCchhhhhhHHHHHHHHhcC
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS-LELRGLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~-lilr~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ....++|++.++|+.|+ +|++++++||.+..   .....|++.|+..+++ ++...+....||++.....   .+++.|
T Consensus       106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~---~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~---~~~~~~  178 (247)
T d2gfha1         106 QHMILADDVKAMLTELR-KEVRLLLLTNGDRQ---TQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYH---CCDLLG  178 (247)
T ss_dssp             HTCCCCHHHHHHHHHHH-TTSEEEEEECSCHH---HHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHH---HHHHHT
T ss_pred             ccCccCccHHHHHHHhh-cccceEEeecccch---hhhhhhhhccccccccccccccccccchhhhhhHHH---HHHHhh
Confidence            34678999999999998 58999999997643   3677788899988765 4444444567888755433   334445


Q ss_pred             C--cEEEEEcCCc-cccCCC-CCCCcEEEe
Q 025203          223 Y--RIWGVVGDQW-SSFEGL-PKPKRTFKL  248 (256)
Q Consensus       223 ~--~i~~~iGD~~-sDl~ga-~~g~r~fkl  248 (256)
                      .  +.+++|||++ +|+.+| .+|.+++.+
T Consensus       179 ~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~  208 (247)
T d2gfha1         179 VQPGDCVMVGDTLETDIQGGLNAGLKATVW  208 (247)
T ss_dssp             CCGGGEEEEESCTTTHHHHHHHTTCSEEEE
T ss_pred             cCHHhcceeccChHhHHHHHHHcCCeEEEE
Confidence            4  4589999997 899988 579986654

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.35  E-value=9.3e-13  Score=109.44  Aligned_cols=98  Identities=13%  Similarity=0.094  Sum_probs=72.6

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ...++||+.++|+.|+ +|++++++||.+..   .....|+..|+..+++.++.++ ....||++....   ..+++.|.
T Consensus        98 ~~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~---~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~---~~~~~l~~  170 (230)
T d1x42a1          98 YGELYPEVVEVLKSLK-GKYHVGMITDSDTE---YLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFE---LALKKAGV  170 (230)
T ss_dssp             HCCBCTTHHHHHHHHB-TTBEEEEEESSCHH---HHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHH---HHHHHHTC
T ss_pred             hCcccccHHHHHHHhh-ccCceeeeeccccc---cchhhhcccccccccccccccccccccchhhHHHH---HHHhhhcc
Confidence            3567899999999996 58999999997644   3567788899988765555543 356678774433   33444454


Q ss_pred             --cEEEEEcCCc-cccCCC-CCCCcEEEec
Q 025203          224 --RIWGVVGDQW-SSFEGL-PKPKRTFKLP  249 (256)
Q Consensus       224 --~i~~~iGD~~-sDl~ga-~~g~r~fklP  249 (256)
                        +-+++|||+. +|+++| .+|.+++.++
T Consensus       171 ~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~  200 (230)
T d1x42a1         171 KGEEAVYVGDNPVKDCGGSKNLGMTSILLD  200 (230)
T ss_dssp             CGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred             cccccceeecCcHhHHHHHHHcCCEEEEEC
Confidence              3489999985 899987 6899998875

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=4.9e-13  Score=109.66  Aligned_cols=107  Identities=10%  Similarity=-0.047  Sum_probs=76.4

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCccc-HHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESL-RSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~-r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...++|++.++|+.|+++|++++++||..... .......+...|+..|++.++..+ ....||.+.......+.+. ..
T Consensus        95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~-v~  173 (222)
T d1cr6a1          95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK-AK  173 (222)
T ss_dssp             TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT-SC
T ss_pred             cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhC-CC
Confidence            46789999999999999999999999865432 222344456677777766666554 3567888755443333331 23


Q ss_pred             CcEEEEEcCCccccCCCC-CCCcEEEecCCC
Q 025203          223 YRIWGVVGDQWSSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       223 ~~i~~~iGD~~sDl~ga~-~g~r~fklPnp~  252 (256)
                      .+.+++|||+..|+.+|. +|.+++-+.++.
T Consensus       174 p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~  204 (222)
T d1cr6a1         174 PNEVVFLDDFGSNLKPARDMGMVTILVHNTA  204 (222)
T ss_dssp             TTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred             cceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence            346899999999999884 799999987764

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.9e-13  Score=108.29  Aligned_cols=104  Identities=8%  Similarity=-0.096  Sum_probs=72.3

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHH-HHHHHHHhcCCCCcceEEEe-cCCCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRS-YTVDNLIHVGYHGWASLELR-GLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~-~T~~~L~~~G~~~~~~lilr-~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...++|++.+++..|+++|++++++||....... .........|+..+++.++. .+....||++....   ..++..|
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~---~~~~~~~  173 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYK---FLLDTLK  173 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHH---HHHHHHT
T ss_pred             cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHH---HHhhhcc
Confidence            4578999999999999999999999997643321 12223334455555444444 44466788875543   3344445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .  +.+++|||+.+|+.+| .+|.+++-+.++
T Consensus       174 ~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~  205 (225)
T d1zd3a1         174 ASPSEVVFLDDIGANLKPARDLGMVTILVQDT  205 (225)
T ss_dssp             CCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred             cCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence            4  5688999999999987 489999988654

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.3e-12  Score=107.97  Aligned_cols=99  Identities=11%  Similarity=-0.064  Sum_probs=72.9

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE--ecCCCCCchhhhhhHHHHHHHHhcCC
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL--RGLEDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil--r~~~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..++||+.+++++|+++|++++++||.+...   ....+...|+..++..+.  .+.....||++....   ..+++.|.
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~---~~~~~~~~  199 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEA---QKLLFGHSTEGDILELVDGHFDTKIGHKVESESYR---KIADSIGC  199 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHH---HHHHHHTS
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHH---HHHHHHHcCcchhhhhcceeeccccccCCCcHHHH---HHHHHhCC
Confidence            4678999999999999999999999997543   556677788766543222  223345688874443   34444454


Q ss_pred             --cEEEEEcCCccccCCC-CCCCcEEEecC
Q 025203          224 --RIWGVVGDQWSSFEGL-PKPKRTFKLPN  250 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga-~~g~r~fklPn  250 (256)
                        ..+++|||+..|+.+| .+|.+++.+..
T Consensus       200 ~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r  229 (253)
T d1zs9a1         200 STNNILFLTDVTREASAAEEADVHVAVVVR  229 (253)
T ss_dssp             CGGGEEEEESCHHHHHHHHHTTCEEEEECC
T ss_pred             CcCcEEEEeCCHHHHHHHHHcCCEEEEEeC
Confidence              4699999999999988 48999999843

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.31  E-value=6.9e-13  Score=109.21  Aligned_cols=100  Identities=12%  Similarity=0.043  Sum_probs=71.4

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce-EEEecC---CCCCchhhhhhHHHHHHHH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS-LELRGL---EDEYKKVQQYKAQVRKRLV  219 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~-lilr~~---~~~~kp~~~~K~~~r~~l~  219 (256)
                      ....++||+.++++.|+.   +.+++||.....   ....|++.|+..++. .+...+   ....||.+...   ...++
T Consensus        82 ~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~---~~~~~  152 (222)
T d2fdra1          82 RDVKIIDGVKFALSRLTT---PRCICSNSSSHR---LDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIF---LHGAA  152 (222)
T ss_dssp             HHCCBCTTHHHHHHHCCS---CEEEEESSCHHH---HHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHH---HHHHH
T ss_pred             hccchhhhHHHHhhhccc---cceeeeecchhh---hhhhhcccccccccceeecccccccccccccCHHHH---HHHHH
Confidence            357789999999887754   567899986543   677788999988753 344433   24567776443   34444


Q ss_pred             hcCCc--EEEEEcCCccccCCCC-CCCcEEEecCCC
Q 025203          220 KEGYR--IWGVVGDQWSSFEGLP-KPKRTFKLPNSM  252 (256)
Q Consensus       220 ~~g~~--i~~~iGD~~sDl~ga~-~g~r~fklPnp~  252 (256)
                      +.|.+  -+++|||+..|+.+|. +|.+++.+.+..
T Consensus       153 ~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~  188 (222)
T d2fdra1         153 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGAS  188 (222)
T ss_dssp             HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCST
T ss_pred             hhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCC
Confidence            44554  5999999999999984 899999887654

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.29  E-value=2.3e-12  Score=107.14  Aligned_cols=97  Identities=9%  Similarity=-0.040  Sum_probs=73.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEEecC-CCCCchhhhhhHHHHHHHHhcCC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLELRGL-EDEYKKVQQYKAQVRKRLVKEGY  223 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lilr~~-~~~~kp~~~~K~~~r~~l~~~g~  223 (256)
                      ..+++|++.++|+.|+  |+.++++||.+...   ....+++.|+..++..++.++ ....||++....   ..+++.|.
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~---~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~---~a~~~lg~  162 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDM---LQALVANAGLTDSFDAVISVDAKRVFKPHPDSYA---LVEEVLGV  162 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHH---HHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHH---HHHHHHCC
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHH---HHHHHhhcccccccccccccccccccCccHHHHH---HHHHHhCC
Confidence            4688999999999885  78999999987643   466677888887765555554 456789885443   34444555


Q ss_pred             --cEEEEEcCCccccCCCC-CCCcEEEec
Q 025203          224 --RIWGVVGDQWSSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       224 --~i~~~iGD~~sDl~ga~-~g~r~fklP  249 (256)
                        +.+++|||+.+|+.+|. +|.+++.+.
T Consensus       163 ~p~e~l~VgD~~~di~~A~~aG~~tv~v~  191 (245)
T d1qq5a_         163 TPAEVLFVSSNGFDVGGAKNFGFSVARVA  191 (245)
T ss_dssp             CGGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred             ChhhEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence              45999999999999984 899999874

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=1.5e-12  Score=103.30  Aligned_cols=101  Identities=11%  Similarity=0.045  Sum_probs=70.1

Q ss_pred             CCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhc-CCCCcceEEE-ecCCCCCchhhhhhHHHHHHHHhcC
Q 025203          145 KAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHV-GYHGWASLEL-RGLEDEYKKVQQYKAQVRKRLVKEG  222 (256)
Q Consensus       145 ~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~-G~~~~~~lil-r~~~~~~kp~~~~K~~~r~~l~~~g  222 (256)
                      ...+.+++.+++..++++|++++++||.+....   ...+... |+..+++.++ .++....||.+....   ..+++.|
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~---~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~---~~~~~~~  155 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHT---TFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQ---HVLQAEG  155 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTT---SCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHH---HHHHHHT
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHH---HHHHHHcccchhhccceeecccccccccchHHHH---HHHHhcC
Confidence            357889999999999999999999999765431   2223332 4444444444 444456677774433   3334445


Q ss_pred             C--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          223 Y--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       223 ~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      .  ..+++|||+.+|+.+| .+|.+++.+.+|
T Consensus       156 ~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~  187 (197)
T d2b0ca1         156 FSPSDTVFFDDNADNIEGANQLGITSILVKDK  187 (197)
T ss_dssp             CCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             CCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence            4  4599999999999987 589999998665

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=99.17  E-value=3.4e-11  Score=92.39  Aligned_cols=75  Identities=13%  Similarity=0.122  Sum_probs=62.9

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCC-----------
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRR-----------  173 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~-----------  173 (256)
                      +.++|||||||..+...         .|           ..+.|+++++++++.|+++|++|++.|+|.           
T Consensus         2 K~i~~DiDGTI~~~~~~---------~y-----------~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~   61 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTS---------DY-----------RNVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKI   61 (124)
T ss_dssp             CEEEECSTTTTBCCCCS---------CG-----------GGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHH
T ss_pred             CEEEEeCCCCeECCCCC---------Cc-----------CccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHH
Confidence            57999999999876421         11           246899999999999999999999999995           


Q ss_pred             -cccHHHHHHHHHhcCCCCcceEEEecC
Q 025203          174 -ESLRSYTVDNLIHVGYHGWASLELRGL  200 (256)
Q Consensus       174 -~~~r~~T~~~L~~~G~~~~~~lilr~~  200 (256)
                       +..++.|.++|++.|++ |++++++.+
T Consensus        62 ~~~~~~~T~~wL~~~gI~-Yd~Li~gKP   88 (124)
T d1xpja_          62 NIHTLPIITEWLDKHQVP-YDEILVGKP   88 (124)
T ss_dssp             HHHTHHHHHHHHHHTTCC-CSEEEECCC
T ss_pred             HHHHHHHHHHHHHHcCCC-ceEEEECCC
Confidence             34678899999999998 899998753

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.16  E-value=4e-11  Score=98.75  Aligned_cols=100  Identities=13%  Similarity=0.080  Sum_probs=64.1

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc---eEEEecCC-----------CCCchhhh
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA---SLELRGLE-----------DEYKKVQQ  209 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~---~lilr~~~-----------~~~kp~~~  209 (256)
                      ...++.||+.++++.|+++|++++++||...   ..+...|+++|...+.   .+...++.           ...++.+.
T Consensus        72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~---~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~  148 (226)
T d2feaa1          72 EDAKIREGFREFVAFINEHEIPFYVISGGMD---FFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC  148 (226)
T ss_dssp             HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEH---HHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred             hccchhHHHHHHHHHHHhcccccccCCcchh---hhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHH
Confidence            4577899999999999999999999999864   4467778888876542   11111111           01112222


Q ss_pred             hhHHHHHHHHhcCCcEEEEEcCCccccCCCCCCCcEEE
Q 025203          210 YKAQVRKRLVKEGYRIWGVVGDQWSSFEGLPKPKRTFK  247 (256)
Q Consensus       210 ~K~~~r~~l~~~g~~i~~~iGD~~sDl~ga~~g~r~fk  247 (256)
                      .+..+.+.+ ......+++|||+.+|+.++....-.|.
T Consensus       149 ~~~~~~~~~-~~~~~~~i~iGDs~~Dl~~a~~A~~~~a  185 (226)
T d2feaa1         149 CKPSVIHEL-SEPNQYIIMIGDSVTDVEAAKLSDLCFA  185 (226)
T ss_dssp             CHHHHHHHH-CCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred             HHHHHHHHh-cCCCceEEEEeCchhhHHHHHHCCEEEE
Confidence            233333333 2244679999999999998753334553

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.12  E-value=4.2e-11  Score=101.38  Aligned_cols=62  Identities=18%  Similarity=0.310  Sum_probs=51.3

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV  181 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~  181 (256)
                      ++.++|+||+||||++.                           ..++|++.+++++|+++|.+++++||+....+....
T Consensus         5 ~~ik~vlFDlDGTL~~~---------------------------~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~   57 (261)
T d1vjra_           5 DKIELFILDMDGTFYLD---------------------------DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYV   57 (261)
T ss_dssp             GGCCEEEECCBTTTEET---------------------------TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHH
T ss_pred             HhCCEEEEeCCCeeEEC---------------------------CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH
Confidence            35689999999999983                           346799999999999999999999998766666667


Q ss_pred             HHHHhcCCC
Q 025203          182 DNLIHVGYH  190 (256)
Q Consensus       182 ~~L~~~G~~  190 (256)
                      +.++..|++
T Consensus        58 ~~~~~~g~~   66 (261)
T d1vjra_          58 RKLRNMGVD   66 (261)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhhccc
Confidence            777766654

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.08  E-value=7.1e-11  Score=90.34  Aligned_cols=67  Identities=12%  Similarity=0.140  Sum_probs=57.5

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      .|+|||||||.++..+                      ....|+|+++++++.|+++|+.|++.|+|+...++.|.++|+
T Consensus         2 ti~vDiDGTl~~~~~~----------------------~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~   59 (122)
T d2obba1           2 TIAVDFDGTIVEHRYP----------------------RIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCR   59 (122)
T ss_dssp             EEEECCBTTTBCSCTT----------------------SCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred             EEEEEcCCCcCCCCCC----------------------ccccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHH
Confidence            5899999999875411                      135789999999999999999999999999999999999999


Q ss_pred             hcCCCCcceE
Q 025203          186 HVGYHGWASL  195 (256)
Q Consensus       186 ~~G~~~~~~l  195 (256)
                      +.|++ ++.+
T Consensus        60 ~~~i~-yd~i   68 (122)
T d2obba1          60 ARGLE-FYAA   68 (122)
T ss_dssp             TTTCC-CSEE
T ss_pred             HcCCC-ceeh
Confidence            99998 4443

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=1e-09  Score=88.95  Aligned_cols=99  Identities=13%  Similarity=0.033  Sum_probs=64.7

Q ss_pred             CcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHH--------HHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHH
Q 025203          146 APALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTV--------DNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKR  217 (256)
Q Consensus       146 ~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~--------~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~  217 (256)
                      ..+++++.+++.    .+.++++.|+..........        ..|...|+..|+..+..++....||++.....   .
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~KP~p~~f~~---~  168 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYAN---I  168 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHH---H
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCCCCChhHhHH---H
Confidence            445666666554    56677888887643211111        12345677777777777665567888854433   3


Q ss_pred             HHhcCC--cEEEEEcCCccccCCC-CCCCcEEEecCC
Q 025203          218 LVKEGY--RIWGVVGDQWSSFEGL-PKPKRTFKLPNS  251 (256)
Q Consensus       218 l~~~g~--~i~~~iGD~~sDl~ga-~~g~r~fklPnp  251 (256)
                      +++.|.  +.+++|||+..|+.+| .+|.+++-+.+|
T Consensus       169 ~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~  205 (225)
T d2g80a1         169 LRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRP  205 (225)
T ss_dssp             HHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCT
T ss_pred             HHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCC
Confidence            334454  4699999999999998 589999998654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=4.1e-09  Score=88.64  Aligned_cols=67  Identities=16%  Similarity=0.233  Sum_probs=57.0

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .++|+||+||||++.                           ..++|++.++++.|+++|++++|+||.+...++...+.
T Consensus         3 ik~VifDlDGTL~~~---------------------------~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~   55 (250)
T d2c4na1           3 IKNVICDIDGVLMHD---------------------------NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR   55 (250)
T ss_dssp             CCEEEEECBTTTEET---------------------------TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred             CCEEEEECCCeeEEC---------------------------CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHH
Confidence            589999999999873                           34678999999999999999999999998888888899


Q ss_pred             HHhcCCCCcceEEE
Q 025203          184 LIHVGYHGWASLEL  197 (256)
Q Consensus       184 L~~~G~~~~~~lil  197 (256)
                      |+++|++.....++
T Consensus        56 l~~~G~~~~~~~i~   69 (250)
T d2c4na1          56 FATAGVDVPDSVFY   69 (250)
T ss_dssp             HHHTTCCCCGGGEE
T ss_pred             HhhccccccceeEe
Confidence            99999985443333

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.84  E-value=4.1e-09  Score=84.26  Aligned_cols=100  Identities=15%  Similarity=0.015  Sum_probs=60.4

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcceEEE-ecCC----------CCCchhhhhhH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWASLEL-RGLE----------DEYKKVQQYKA  212 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~lil-r~~~----------~~~kp~~~~K~  212 (256)
                      ...++.+++.++++.++.+|..++++|+.....   ....+.+.+...+....+ ....          ...++..   .
T Consensus        72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  145 (210)
T d1j97a_          72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIA---VNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKG---E  145 (210)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH---HHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHH---H
T ss_pred             hhhhhhhhHHHHHHHHHHcCCEEEeeccccccc---ccchhhccchhhhhhhhhcccccccccccccccccccccc---c
Confidence            467889999999999999999999999986543   444555566654322111 1111          1111111   1


Q ss_pred             HHHHHHHhc--CCcEEEEEcCCccccCCCC-CCCcEEEecCC
Q 025203          213 QVRKRLVKE--GYRIWGVVGDQWSSFEGLP-KPKRTFKLPNS  251 (256)
Q Consensus       213 ~~r~~l~~~--g~~i~~~iGD~~sDl~ga~-~g~r~fklPnp  251 (256)
                      .....++..  ....+++|||+.+|+.... +| ..+.+ ||
T Consensus       146 ~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag-~~va~-na  185 (210)
T d1j97a_         146 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAG-LKIAF-CA  185 (210)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCS-EEEEE-SC
T ss_pred             hhhhHHHHhcccccceEEecCCcChHHHHHHCC-CCEEE-CC
Confidence            222222222  3446899999999998764 44 34444 54

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=3.4e-08  Score=80.93  Aligned_cols=110  Identities=17%  Similarity=0.175  Sum_probs=66.2

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCC--CHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc----
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERL--NASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES----  175 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~--~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~----  175 (256)
                      ...++++||.||||+.....        ..|  ++..|        .-.+|++.+.++.|.++|+.++++||-+.-    
T Consensus        19 ~~~Kia~fDrDGtLik~~~~--------~~~~~~~~d~--------~~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~   82 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSG--------KVFPTSPSDW--------RILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGK   82 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSS--------CSSCSSTTCC--------EESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTS
T ss_pred             CcCcEEEEECCCceEeeCCC--------CcCCCChhhc--------eeccCCHHHHHHHHHhCCcEEEEecCcchhccCC
Confidence            34689999999999875421        111  11111        123699999999999999999999997531    


Q ss_pred             ----c-HHHHHHHHHhcCCCCcceEEEecCC-CCCchhhhhhHHHHHHH-Hhc------CCcEEEEEcCCc
Q 025203          176 ----L-RSYTVDNLIHVGYHGWASLELRGLE-DEYKKVQQYKAQVRKRL-VKE------GYRIWGVVGDQW  233 (256)
Q Consensus       176 ----~-r~~T~~~L~~~G~~~~~~lilr~~~-~~~kp~~~~K~~~r~~l-~~~------g~~i~~~iGD~~  233 (256)
                          . .......++.+|.+.  .++..... .-+||.+    ++...+ ++.      ..+-+.+|||+.
T Consensus        83 ~s~~~~~~~~~~i~~~l~~~~--~i~~~~~~~~~RKP~~----GM~~~~~~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1          83 LPAEVFKGKVEAVLEKLGVPF--QVLVATHAGLNRKPVS----GMWDHLQEQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             SCHHHHHHHHHHHHHHHTSCC--EEEEECSSSSSSTTST----HHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred             cCHHHHHHHHHHHHHHcCCCc--cEEEecCccccCCCcc----HHHHHHHHHhcccccCCcCceEEEeCcc
Confidence                1 112233445567663  34444443 4466655    233333 221      123488999976

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.52  E-value=5.2e-08  Score=81.60  Aligned_cols=56  Identities=9%  Similarity=0.255  Sum_probs=46.6

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      -++|+||+||||++.                           ..++|++.+.+++|++.|++++++||++...+....+.
T Consensus         2 yk~v~fDlDGTL~~~---------------------------~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~   54 (253)
T d1yv9a1           2 YQGYLIDLDGTIYLG---------------------------KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR   54 (253)
T ss_dssp             CCEEEECCBTTTEET---------------------------TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred             CCEEEEcCCCccEeC---------------------------CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            479999999999983                           24569999999999999999999999887766666666


Q ss_pred             HHh
Q 025203          184 LIH  186 (256)
Q Consensus       184 L~~  186 (256)
                      |..
T Consensus        55 L~~   57 (253)
T d1yv9a1          55 LAN   57 (253)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.52  E-value=1.3e-07  Score=79.15  Aligned_cols=60  Identities=20%  Similarity=0.151  Sum_probs=47.7

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .|.|+||+||||++..                          ...-|.+.+++++|+++|++++++|||+...   ..+.
T Consensus         4 iKli~~DlDGTL~~~~--------------------------~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~---~~~~   54 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPD--------------------------HTISPAVKNAIAAARARGVNVVLTTGRPYAG---VHNY   54 (271)
T ss_dssp             CCEEEECCCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCGGG---THHH
T ss_pred             eeEEEEeCCccccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHH
Confidence            5789999999999843                          1233889999999999999999999998654   4566


Q ss_pred             HHhcCCCCc
Q 025203          184 LIHVGYHGW  192 (256)
Q Consensus       184 L~~~G~~~~  192 (256)
                      ++..++...
T Consensus        55 ~~~l~l~~~   63 (271)
T d1rkqa_          55 LKELHMEQP   63 (271)
T ss_dssp             HHHTTCCST
T ss_pred             HHHhcCcCC
Confidence            677777643

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.50  E-value=4.2e-07  Score=76.28  Aligned_cols=100  Identities=14%  Similarity=0.168  Sum_probs=64.1

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.|+|||||||++..                          ...-|.+++.+++|+++|++++++|||+...   +.+.+
T Consensus         2 Kli~~DlDGTLl~~~--------------------------~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~---~~~~~   52 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSK--------------------------HQVSLENENALRQAQRDGIEVVVSTGRAHFD---VMSIF   52 (285)
T ss_dssp             CEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHH
T ss_pred             eEEEEECCccccCCC--------------------------CccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHH
Confidence            689999999999843                          1233889999999999999999999998543   67777


Q ss_pred             HhcCCCCc----c-eEEEecCCC--CCch-hhhhhHHHHHHHHhcCCcEEEEEcCCc
Q 025203          185 IHVGYHGW----A-SLELRGLED--EYKK-VQQYKAQVRKRLVKEGYRIWGVVGDQW  233 (256)
Q Consensus       185 ~~~G~~~~----~-~lilr~~~~--~~kp-~~~~K~~~r~~l~~~g~~i~~~iGD~~  233 (256)
                      +.+|++.+    . .++....+.  ..++ ....-.++...+++.+....++.+|.+
T Consensus        53 ~~l~~~~~~i~~nG~~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~  109 (285)
T d1nrwa_          53 EPLGIKTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAI  109 (285)
T ss_dssp             GGGTCCCEEEEGGGTEEECTTCCEEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCE
T ss_pred             HHhCCCcEEEecCceeEEecCCceeeeccCCHHHHHHHHHHHHHcCCceEEecCceE
Confidence            88888753    1 111111110  0000 011113455566666766666666654

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=1.5e-07  Score=76.19  Aligned_cols=58  Identities=17%  Similarity=0.188  Sum_probs=44.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      |-.|++||||||+++.                          ...-+.+++++++|+++|++++++|||+...   ..+.
T Consensus         4 ~~li~~DlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~---~~~~   54 (232)
T d1xvia_           4 PLLVFSDLDGTLLDSH--------------------------SYDWQPAAPWLTRLREANVPVILCSSKTSAE---MLYL   54 (232)
T ss_dssp             CEEEEEECTTTTSCSS--------------------------CCSCCTTHHHHHHHHHTTCCEEEECSSCHHH---HHHH
T ss_pred             CEEEEEECCCCccCCc--------------------------CcCCHHHHHHHHHHHHCCCEEEEEeCCChhh---chhH
Confidence            4467889999999854                          1233667899999999999999999998644   4555


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++.+|+.
T Consensus        55 ~~~~~~~   61 (232)
T d1xvia_          55 QKTLGLQ   61 (232)
T ss_dssp             HHHTTCT
T ss_pred             HHHhccC
Confidence            6666664

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.40  E-value=1.8e-07  Score=78.32  Aligned_cols=60  Identities=12%  Similarity=0.244  Sum_probs=48.5

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      -|+|+||+||||++.                           ..++|++.++++.|+++|++++++||+....++...+.
T Consensus         2 yk~vlFDlDGTL~~~---------------------------~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~   54 (253)
T d1wvia_           2 YKGYLIDLDGTIYKG---------------------------KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM   54 (253)
T ss_dssp             CCEEEEECBTTTEET---------------------------TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred             cCEEEEcCcCceEEC---------------------------CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence            379999999999983                           34679999999999999999999999877666666666


Q ss_pred             HHh-cCCC
Q 025203          184 LIH-VGYH  190 (256)
Q Consensus       184 L~~-~G~~  190 (256)
                      |.. .|+.
T Consensus        55 l~~~~~~~   62 (253)
T d1wvia_          55 LATSFNIK   62 (253)
T ss_dssp             HHHHHSCC
T ss_pred             HHhhcCcc
Confidence            643 4554

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.38  E-value=2.6e-07  Score=74.62  Aligned_cols=48  Identities=21%  Similarity=0.261  Sum_probs=40.4

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      |.++|+||+||||+++.                          ....+.+.+.+++|+++|++++++|||+...
T Consensus         1 kiK~i~~D~DGTL~~~~--------------------------~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~   48 (230)
T d1wr8a_           1 KIKAISIDIDGTITYPN--------------------------RMIHEKALEAIRRAESLGIPIMLVTGNTVQF   48 (230)
T ss_dssp             CCCEEEEESTTTTBCTT--------------------------SCBCHHHHHHHHHHHHTTCCEEEECSSCHHH
T ss_pred             CceEEEEecCCCCcCCC--------------------------CccCHHHHHHHHHHHhCCCeEEEEeCCcHHH
Confidence            45799999999999853                          2344888999999999999999999998644

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.30  E-value=5.6e-07  Score=71.24  Aligned_cols=139  Identities=14%  Similarity=0.162  Sum_probs=75.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCC--------CCCCHHHHHHHHH-------------------hcCCcchHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGG--------ERLNASSWEAWMK-------------------ESKAPALEHTLNLF  156 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~--------~~~~~~~~~~wv~-------------------~~~~~~~pg~~ell  156 (256)
                      .+.|+|||||||+++.--.....+|-        ...+   |.+|+.                   .......++...+.
T Consensus         2 mkli~fDlDGTLl~e~~~~~a~~~Gi~~~~~tgR~~~~---~~~~~~~~v~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (206)
T d1rkua_           2 MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPD---YDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFV   78 (206)
T ss_dssp             CEEEEEESBTTTBCCHHHHHHHHHTCGGGGCCTTTCCC---HHHHHHHHHHHHHHTTCCHHHHHHHHTTCCCCTTHHHHH
T ss_pred             cEEEEEcCccchHHHHHHHHHHHcCCHHHHHHCCCCCC---HHHHHHHHHHHHHhCCCceehhhhhhhhccccchHHHHH
Confidence            47899999999999753221112231        1112   222221                   13456678887777


Q ss_pred             HHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc--eEEEecCCCCC---chhhhhhHHHHHHHHhcCCcEEEEEcC
Q 025203          157 HEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA--SLELRGLEDEY---KKVQQYKAQVRKRLVKEGYRIWGVVGD  231 (256)
Q Consensus       157 ~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~--~lilr~~~~~~---kp~~~~K~~~r~~l~~~g~~i~~~iGD  231 (256)
                      +.+ +.+++++++|+...   ..........++..+.  .+.........   .+....+....+.+ ....+.+++|||
T Consensus        79 ~~~-~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~eviaiGD  153 (206)
T d1rkua_          79 DWL-RERFQVVILSDTFY---EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAF-KSLYYRVIAAGD  153 (206)
T ss_dssp             HHH-HTTSEEEEEEEEEH---HHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHH-HHTTCEEEEEEC
T ss_pred             HHh-hcCceEEEeccCch---HHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHh-cccccceEEecC
Confidence            765 57899999998643   3355666667776442  22222221110   01111112222222 234567899999


Q ss_pred             CccccCCCCCCCcEEEecCC
Q 025203          232 QWSSFEGLPKPKRTFKLPNS  251 (256)
Q Consensus       232 ~~sDl~ga~~g~r~fklPnp  251 (256)
                      +.+|+.........+.. ||
T Consensus       154 g~NDi~Ml~~Ag~gIAm-na  172 (206)
T d1rkua_         154 SYNDTTMLSEAHAGILF-HA  172 (206)
T ss_dssp             SSTTHHHHHHSSEEEEE-SC
T ss_pred             CccCHHHHHhCCccEEE-CC
Confidence            99999875433344444 54

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=98.29  E-value=3e-07  Score=75.06  Aligned_cols=57  Identities=19%  Similarity=0.277  Sum_probs=43.6

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.|++||||||+++.                          .+  +.+.+.+++|+++|++++++|||+...   +...
T Consensus         2 iKli~~DlDGTLl~~~--------------------------~~--~~~~~ai~~l~~~G~~~~~aTGR~~~~---~~~~   50 (243)
T d1wzca1           2 IRLIFLDIDKTLIPGY--------------------------EP--DPAKPIIEELKDMGFEIIFNSSKTRAE---QEYY   50 (243)
T ss_dssp             EEEEEECCBTTTBSSS--------------------------CS--GGGHHHHHHHHHTTEEEEEECSSCHHH---HHHH
T ss_pred             cEEEEEeCCCCCCCCC--------------------------CC--HHHHHHHHHHHHCCCEEEEEeCCCHHH---HHHH
Confidence            3689999999999732                          11  446789999999999999999998643   5556


Q ss_pred             HHhcCCCC
Q 025203          184 LIHVGYHG  191 (256)
Q Consensus       184 L~~~G~~~  191 (256)
                      ++..|+..
T Consensus        51 ~~~~~~~~   58 (243)
T d1wzca1          51 RKELEVET   58 (243)
T ss_dssp             HHHHTCCS
T ss_pred             HHHhcccc
Confidence            66666653

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=2.4e-07  Score=77.46  Aligned_cols=59  Identities=19%  Similarity=0.273  Sum_probs=44.9

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      .+.++||+||||+++.                         +..+-|.+.+.+++|+++|++++++|||+...   +.+.
T Consensus         2 IKli~~DlDGTLl~~~-------------------------~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~---~~~~   53 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDA-------------------------KTYNQPRFMAQYQELKKRGIKFVVASGNQYYQ---LISF   53 (269)
T ss_dssp             CCEEEECCCCCCSCTT-------------------------SCCCHHHHHHHHHHHHHHTCEEEEECSSCHHH---HGGG
T ss_pred             EEEEEEeCCccCcCCC-------------------------CcCChHHHHHHHHHHHHCCCEEEEEcCCCHHH---HHHH
Confidence            3689999999999843                         12234789999999999999999999998533   4444


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++.+++.
T Consensus        54 ~~~l~~~   60 (269)
T d1rlma_          54 FPELKDE   60 (269)
T ss_dssp             CTTTTTT
T ss_pred             HHHhCcc
Confidence            5556655

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=4.8e-07  Score=73.28  Aligned_cols=46  Identities=22%  Similarity=0.293  Sum_probs=38.0

Q ss_pred             CCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          102 DGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       102 ~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .|++.++|||||||+++.                          ...-|.+++.+++|+++| .++++|||+.
T Consensus         1 ~~~kl~~fDlDGTLl~~~--------------------------~~i~~~~~~al~~l~~~g-~~~i~Tgr~~   46 (243)
T d2amya1           1 PGPALCLFDVDGTLTAPR--------------------------QKITKEMDDFLQKLRQKI-KIGVVGGSDF   46 (243)
T ss_dssp             CCSEEEEEESBTTTBCTT--------------------------SCCCHHHHHHHHHHTTTS-EEEEECSSCH
T ss_pred             CCCEEEEEcCcCCeeCCC--------------------------CcCCHHHHHHHHHHHcCC-CEEEEcCCCh
Confidence            368899999999999853                          234588999999999888 5889999974

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.23  E-value=5.6e-07  Score=75.11  Aligned_cols=46  Identities=28%  Similarity=0.485  Sum_probs=37.8

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      |+|+|||||||++..                         ....-+.+++.+++|+++|++++++|||+..
T Consensus         2 k~if~DlDGTL~~~~-------------------------~~~i~~~~~~al~~l~~~gi~v~~~TGR~~~   47 (260)
T d2rbka1           2 KALFFDIDGTLVSFE-------------------------THRIPSSTIEALEAAHAKGLKIFIATGRPKA   47 (260)
T ss_dssp             CEEEECSBTTTBCTT-------------------------TSSCCHHHHHHHHHHHHTTCEEEEECSSCGG
T ss_pred             eEEEEECCCCCcCCC-------------------------CCCCCHHHHHHHHHHHHCCCEEEEECCCCHH
Confidence            689999999999742                         1123367899999999999999999999853

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=1.3e-05  Score=64.10  Aligned_cols=126  Identities=10%  Similarity=0.000  Sum_probs=78.2

Q ss_pred             CcEEEEecCCCccCChHHHHHh---ccCCC---------CCC-H--------HHHHHHHH----h---cCCcchHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKH---GFGGE---------RLN-A--------SSWEAWMK----E---SKAPALEHTLNL  155 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~---~~g~~---------~~~-~--------~~~~~wv~----~---~~~~~~pg~~el  155 (256)
                      +--|.+||||||+|....+...   .++..         .|. .        +....+..    .   ...+|+||+.++
T Consensus         3 ~mrI~iDmDGVL~Df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ff~~L~p~~gA~e~   82 (195)
T d1q92a_           3 ALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGAVEA   82 (195)
T ss_dssp             CEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCCSSCHHHHHHHHSTTHHHHHHHHHTSTTTTTTCCBCTTHHHH
T ss_pred             ccEEEEECCCccccCHHHHHHHHHHHcCCccccChhhhccchhHHHhCCCcHHHHHHHHHHhhhhhHHhhCCcccCHHHH
Confidence            4468999999999987665432   23321         111 1        11122221    1   467999999999


Q ss_pred             HHHHHHcCC-eEEEEeCCCccc---HHHHHHHHHhc-CCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEc
Q 025203          156 FHEIKNRGV-KIFLVSSRRESL---RSYTVDNLIHV-GYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVG  230 (256)
Q Consensus       156 l~~L~~~G~-~i~ivTnR~~~~---r~~T~~~L~~~-G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iG  230 (256)
                      ++.|++.|. .++++|.++...   ...+..||++. |...+..+++..+..                 .  +..-+.|.
T Consensus        83 l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~K~-----------------~--~~~d~lID  143 (195)
T d1q92a_          83 VKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRDKT-----------------V--VSADLLID  143 (195)
T ss_dssp             HHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSCST-----------------T--SCCSEEEE
T ss_pred             HHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccccc-----------------e--ecCeEEec
Confidence            999998764 688999988543   34577899876 333235666654210                 0  11125899


Q ss_pred             CCccccCCC-CCCCcEEEe
Q 025203          231 DQWSSFEGL-PKPKRTFKL  248 (256)
Q Consensus       231 D~~sDl~ga-~~g~r~fkl  248 (256)
                      |++.-+... .+|.+++.+
T Consensus       144 D~p~n~~~~~~~g~~~il~  162 (195)
T d1q92a_         144 DRPDITGAEPTPSWEHVLF  162 (195)
T ss_dssp             SCSCCCCSCSSCSSEEEEE
T ss_pred             CcHHHHHHHhcCCCeEEEE
Confidence            998666554 467777755

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=98.18  E-value=1.1e-06  Score=73.25  Aligned_cols=52  Identities=15%  Similarity=0.248  Sum_probs=41.6

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCccc
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESL  176 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~  176 (256)
                      ++...+.|+||+||||+.+.                         ....-|.+++.|++|+++|++++++|||+...
T Consensus         6 ~~~~ikli~~DlDGTLl~~~-------------------------~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~   57 (283)
T d2b30a1           6 KGADIKLLLIDFDGTLFVDK-------------------------DIKVPSENIDAIKEAIEKGYMVSICTGRSKVG   57 (283)
T ss_dssp             TTCCCCEEEEETBTTTBCCT-------------------------TTCSCHHHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred             cccCccEEEEECCCCCcCCC-------------------------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            34557899999999998532                         12344889999999999999999999998543

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.15  E-value=5.5e-07  Score=72.38  Aligned_cols=118  Identities=13%  Similarity=0.164  Sum_probs=70.9

Q ss_pred             CCcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHH
Q 025203          103 GKDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVD  182 (256)
Q Consensus       103 ~~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~  182 (256)
                      ..+.+|||+||+|+|+.-|+...+---..|+.              ..++  -++.|++.|+.++++|++....   +..
T Consensus         4 ~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~--------------~Dg~--gi~~l~~~gi~~~iis~~~~~~---v~~   64 (177)
T d1k1ea_           4 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHV--------------RDGL--GIKMLMDADIQVAVLSGRDSPI---LRR   64 (177)
T ss_dssp             GCCEEEEECTTTTSCSEEEEETTEEEEEEEEH--------------HHHH--HHHHHHHTTCEEEEEESCCCHH---HHH
T ss_pred             cCeEEEEccCCcccCCeEEEeCCCCEEEEEEC--------------cchH--HHHHHhhhcEEEEEecCCchhH---HHH
Confidence            35799999999999987655433211111221              1222  3778899999999999987543   566


Q ss_pred             HHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcC--CcEEEEEcCCccccCCCCCCCcEEEecC
Q 025203          183 NLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEG--YRIWGVVGDQWSSFEGLPKPKRTFKLPN  250 (256)
Q Consensus       183 ~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g--~~i~~~iGD~~sDl~ga~~g~r~fklPn  250 (256)
                      ..++.++..    ++....+  |.     ..+.+.++..|  .+.+++|||..+|+..-......|...|
T Consensus        65 ~~~~l~~~~----~~~~~~~--K~-----~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~n  123 (177)
T d1k1ea_          65 RIADLGIKL----FFLGKLE--KE-----TACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVAD  123 (177)
T ss_dssp             HHHHHTCCE----EEESCSC--HH-----HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT
T ss_pred             HHhhhcccc----ccccccc--HH-----HHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCC
Confidence            677777752    2222111  11     22233334445  4569999999999976432224444444

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.15  E-value=5.3e-07  Score=80.55  Aligned_cols=99  Identities=11%  Similarity=0.017  Sum_probs=65.9

Q ss_pred             cchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcce--EEEecC------------CCCCchhhhhhH
Q 025203          147 PALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWAS--LELRGL------------EDEYKKVQQYKA  212 (256)
Q Consensus       147 ~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~~--lilr~~------------~~~~kp~~~~K~  212 (256)
                      +|.||+.++++.|+++|++++++||++...   +...++++|+..++.  .+...+            ....||++....
T Consensus       215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~---a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~  291 (380)
T d1qyia_         215 RPVDEVKVLLNDLKGAGFELGIATGRPYTE---TVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI  291 (380)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHH
Confidence            578899999999999999999999998644   778888899876642  232211            134566653221


Q ss_pred             HHHHH----------H-Hhc--CCcEEEEEcCCccccCCCC-CCCcEEEe
Q 025203          213 QVRKR----------L-VKE--GYRIWGVVGDQWSSFEGLP-KPKRTFKL  248 (256)
Q Consensus       213 ~~r~~----------l-~~~--g~~i~~~iGD~~sDl~ga~-~g~r~fkl  248 (256)
                      .....          + +..  ..+.+++|||+.+|+.+++ +|.+++-+
T Consensus       292 ~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv  341 (380)
T d1qyia_         292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGT  341 (380)
T ss_dssp             HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEE
Confidence            11100          0 111  2245899999999999874 56666554

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=4.2e-06  Score=72.18  Aligned_cols=94  Identities=12%  Similarity=0.028  Sum_probs=60.0

Q ss_pred             cCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHHhcCCCCcc-eEE-----EecCCC-----CCchhhhhhH
Q 025203          144 SKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLIHVGYHGWA-SLE-----LRGLED-----EYKKVQQYKA  212 (256)
Q Consensus       144 ~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~~~G~~~~~-~li-----lr~~~~-----~~kp~~~~K~  212 (256)
                      ...+..||+.+|++.|+++|++++++||.-   .......|+++|++... +++     ..++..     ...++...|.
T Consensus       132 ~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~---~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~  208 (291)
T d2bdua1         132 SDVMLKEGYENFFGKLQQHGIPVFIFSAGI---GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKH  208 (291)
T ss_dssp             SCCCBCBTHHHHHHHHHHHTCCEEEEEEEE---HHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHH
T ss_pred             cCCCcccCHHHHHHHHHHcCCeEEEEcCCh---HHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCc
Confidence            457889999999999999999999999975   44577888888987321 121     111110     0011222221


Q ss_pred             HH----HHHH-HhcCCcEEEEEcCCccccCCCC
Q 025203          213 QV----RKRL-VKEGYRIWGVVGDQWSSFEGLP  240 (256)
Q Consensus       213 ~~----r~~l-~~~g~~i~~~iGD~~sDl~ga~  240 (256)
                      ..    .... ...+++.++++||+.+|+..+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~  241 (291)
T d2bdua1         209 DGALKNTDYFSQLKDNSNIILLGDSQGDLRMAD  241 (291)
T ss_dssp             HHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTT
T ss_pred             chhhhhHHHHhccCCcCcEEEEeCCHhHHHHHh
Confidence            11    0111 1235677899999999998775

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.08  E-value=1.5e-06  Score=70.91  Aligned_cols=46  Identities=15%  Similarity=0.157  Sum_probs=39.3

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcc
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRES  175 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~  175 (256)
                      .+.++||+||||+++.                          ...-|++.+.+++|+++|++++++|||+..
T Consensus         3 iKli~~D~DGTL~~~~--------------------------~~i~~~~~~al~~l~~~g~~v~~~TGr~~~   48 (225)
T d1l6ra_           3 IRLAAIDVDGNLTDRD--------------------------RLISTKAIESIRSAEKKGLTVSLLSGNVIP   48 (225)
T ss_dssp             CCEEEEEHHHHSBCTT--------------------------SCBCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred             eEEEEEecCCCCcCCC--------------------------CcCCHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence            4689999999999854                          234488999999999999999999999864

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=97.95  E-value=1.6e-05  Score=66.08  Aligned_cols=99  Identities=13%  Similarity=0.095  Sum_probs=58.3

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      +.++|||||||+++.                          ...-|.+.+.+++|++. ..++++|||+...   ....+
T Consensus         3 Kli~~DlDGTL~~~~--------------------------~~i~~~~~~al~~l~~~-~~~~i~TGR~~~~---~~~~~   52 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDN--------------------------LEISEKDRRNIEKLSRK-CYVVFASGRMLVS---TLNVE   52 (267)
T ss_dssp             CEEEEECCCCCSCTT--------------------------SCCCHHHHHHHHHHTTT-SEEEEECSSCHHH---HHHHH
T ss_pred             EEEEEeCCccccCCc--------------------------CccCHHHHHHHHHHHcC-CEEEEECCCChHH---HHHHH
Confidence            589999999999843                          22347889999999865 5799999998543   34444


Q ss_pred             HhcCCCCcc------eEEEecCCC----CCchhhhhhHHHHHHHHhcCCcEEEEEcCCcc
Q 025203          185 IHVGYHGWA------SLELRGLED----EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWS  234 (256)
Q Consensus       185 ~~~G~~~~~------~lilr~~~~----~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~s  234 (256)
                      ++.+....-      .++....+.    ..-+. ..-..+.+.+.+.+.....+.+|.+.
T Consensus        53 ~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i~~-~~~~~i~~~~~~~~~~~~~~~~~~~~  111 (267)
T d1nf2a_          53 KKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPP-EVAKDIIEYIKPLNVHWQAYIDDVLY  111 (267)
T ss_dssp             HHHSSSCCCEEEGGGTEEEETTTEEEEECCBCH-HHHHHHHHHHGGGCCCEEEECSSCEE
T ss_pred             HHhcccCCceeccCCeEEEecccccccccCCCH-HHHHHHHHHHHhcCceEEEeeCceEE
Confidence            444433210      122221110    00011 11133445566667777888888764

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.87  E-value=4e-06  Score=67.17  Aligned_cols=47  Identities=23%  Similarity=0.310  Sum_probs=35.9

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      -|+|||||||++..+..                     ....+-|.+.+.+++|++ |+.++++|||+.
T Consensus         2 Li~~DlDGTL~~~~~~~---------------------~~~~i~~~~~~~l~~l~~-~~~v~i~TGR~~   48 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNP---------------------EESYADAGLLSLISDLKE-RFDTYIVTGRSP   48 (229)
T ss_dssp             EEEEECBTTTBCCCSCG---------------------GGCCCCHHHHHHHHHHHH-HSEEEEECSSCH
T ss_pred             EEEEEecCCCCCCCCCh---------------------hhCCCCHHHHHHHHHHhh-CCCEEEEcCCCH
Confidence            47999999999853210                     124456889999999987 567999999984

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=7.4e-06  Score=65.71  Aligned_cols=42  Identities=21%  Similarity=0.251  Sum_probs=32.2

Q ss_pred             EEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCc
Q 025203          106 AWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRE  174 (256)
Q Consensus       106 avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~  174 (256)
                      .++|||||||+++.                          ...-|.+++.+++|+++|+ ++++|+|+.
T Consensus         3 i~lFDlDGTLl~~~--------------------------~~is~~~~~~i~~l~~~g~-~~i~tgrr~   44 (244)
T d2fuea1           3 LCLFDVDGTLTPAR--------------------------QKIDPEVAAFLQKLRSRVQ-IGVVGGSDY   44 (244)
T ss_dssp             EEEEESBTTTBSTT--------------------------SCCCHHHHHHHHHHTTTSE-EEEECSSCH
T ss_pred             EEEEccccCccCCC--------------------------CcCCHHHHHHHHHHHhCCC-EEEEecCCh
Confidence            35589999999854                          2233788999999999995 667888763

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.77  E-value=1.4e-05  Score=65.46  Aligned_cols=56  Identities=14%  Similarity=0.089  Sum_probs=38.8

Q ss_pred             CcEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHH
Q 025203          104 KDAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDN  183 (256)
Q Consensus       104 ~~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~  183 (256)
                      +..++|||||||+++...                            +...+-+.+++++|+.++++|||+...   ..+.
T Consensus         3 ~~li~~DlDGTL~~~~~~----------------------------~~~~~~~~~~~~~g~~v~i~TGR~~~~---~~~~   51 (244)
T d1s2oa1           3 QLLLISDLDNTWVGDQQA----------------------------LEHLQEYLGDRRGNFYLAYATGRSYHS---AREL   51 (244)
T ss_dssp             SEEEEECTBTTTBSCHHH----------------------------HHHHHHHHHTTGGGEEEEEECSSCHHH---HHHH
T ss_pred             ceEEEEECcccCCCCCCC----------------------------HHHHHHHHHHHcCCCEEEEECCCCHHH---HHHH
Confidence            457788999999986421                            222334556788999999999998543   4555


Q ss_pred             HHhcCCC
Q 025203          184 LIHVGYH  190 (256)
Q Consensus       184 L~~~G~~  190 (256)
                      ++..++.
T Consensus        52 ~~~~~~~   58 (244)
T d1s2oa1          52 QKQVGLM   58 (244)
T ss_dssp             HHHHTCC
T ss_pred             HHHcCCC
Confidence            5666664

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.74  E-value=8.2e-05  Score=56.68  Aligned_cols=93  Identities=18%  Similarity=0.202  Sum_probs=65.3

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      .+++||.++|+.-..                         ..++-|++.+.++.|++.|+++.++||....    |...+
T Consensus         4 ~~~~~d~~~~~~~g~-------------------------~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~----~a~~i   54 (135)
T d2b8ea1           4 TAVIFDKTGTLTKGK-------------------------PDTLKESAKPAVQELKRMGIKVGMITGDNWR----SAEAI   54 (135)
T ss_dssp             CEEEEECCCCCBCSC-------------------------CCCBCTTHHHHHHHHHHTTCEEEEECSSCHH----HHHHH
T ss_pred             EEEEECCceEEEEec-------------------------CCCCCccHHHHHHHHHHcCCEEEEEcCcchh----hhhHH
Confidence            478999999996521                         2577899999999999999999999998654    34444


Q ss_pred             -HhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          185 -IHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       185 -~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                       ++.|++.   .+ ..-.      +.-|....+.+++ | ..++++||..+|...
T Consensus        55 a~~lgI~~---v~-~~~~------p~~k~~~v~~~q~-~-~~v~~vGDg~nD~~a   97 (135)
T d2b8ea1          55 SRELNLDL---VI-AEVL------PHQKSEEVKKLQA-K-EVVAFVGDGINDAPA   97 (135)
T ss_dssp             HHHHTCSE---EE-CSCC------HHHHHHHHHHHTT-T-SCEEEEECSSSSHHH
T ss_pred             Hhhhhhhh---hc-cccc------hhHHHHHHHHHHc-C-CEEEEEeCCCCcHHH
Confidence             5678853   22 2111      2233344444443 4 478999999999864

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.72  E-value=0.00013  Score=57.57  Aligned_cols=105  Identities=14%  Similarity=0.187  Sum_probs=70.0

Q ss_pred             cEEEEecCCCccCChHHHHHhccCCCCCCHHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHH
Q 025203          105 DAWIFDVDDTLLSTIPYFKKHGFGGERLNASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNL  184 (256)
Q Consensus       105 ~avvfDiDgTlldn~~~~~~~~~g~~~~~~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L  184 (256)
                      ..+++|.+||++-+.                         -.|+.|++.+.++.|++.|+++.++||-....   +...=
T Consensus         3 ~~~~~d~~~~~~~~~-------------------------~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~t---A~~ia   54 (168)
T d1wpga2           3 SVICSDKTGTLTTNQ-------------------------LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGT---AIAIC   54 (168)
T ss_dssp             CEEEECCTTTTBCCC-------------------------ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH---HHHHH
T ss_pred             EEEEECCccEEEEEe-------------------------cCCCchhHHHHHHHHHHCcCEEEEECCCCHHH---HHHHH
Confidence            368899999998864                         15788999999999999999999999976432   33333


Q ss_pred             HhcCCCCcceE----EEecCC-C----------------CCchhhhhhHHHHHHHHhcCCcEEEEEcCCccccCC
Q 025203          185 IHVGYHGWASL----ELRGLE-D----------------EYKKVQQYKAQVRKRLVKEGYRIWGVVGDQWSSFEG  238 (256)
Q Consensus       185 ~~~G~~~~~~l----ilr~~~-~----------------~~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~sDl~g  238 (256)
                      ++.|+..-...    .+.... .                -..-.|.-|..+.+.+++.|+ +++++||..+|..+
T Consensus        55 ~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~lv~~l~~~g~-~Va~vGDG~nD~~A  128 (168)
T d1wpga2          55 RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDE-ITAMTGDGVNDAPA  128 (168)
T ss_dssp             HHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCHHHHHHHHHHHHHTTC-CEEEEECSGGGHHH
T ss_pred             HHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccchhHHHHHHHHHHhccc-ceeEEecCCCCHHH
Confidence            56787532111    011000 0                000113345667778888886 57899999999855

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.0014  Score=51.82  Aligned_cols=126  Identities=13%  Similarity=0.054  Sum_probs=67.2

Q ss_pred             CCCCCcEEEEecCCCccCChHHHHHhccCCCCCC-HHHHHHHHHhcCCcchHHHHHHHHHHHHcCCeEEEEeCCCcccHH
Q 025203          100 AGDGKDAWIFDVDDTLLSTIPYFKKHGFGGERLN-ASSWEAWMKESKAPALEHTLNLFHEIKNRGVKIFLVSSRRESLRS  178 (256)
Q Consensus       100 ~~~~~~avvfDiDgTlldn~~~~~~~~~g~~~~~-~~~~~~wv~~~~~~~~pg~~ell~~L~~~G~~i~ivTnR~~~~r~  178 (256)
                      ...++..+|+|+||||+.+..-..    ....+. ...............-||+.+||+.+.+. +.|++-|...+...+
T Consensus        11 ~~~~k~~LVLDLDeTLihs~~~~~----~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~   85 (181)
T d1ta0a_          11 QDSDKICVVIDLDETLVHSSFKPV----NNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYAD   85 (181)
T ss_dssp             GGTTSCEEEECCBTTTEEEESSCC----TTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHH
T ss_pred             ccCCCeEEEEeCCCCEEccccCCC----CCccceeeecccceeeeeEEecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHH
Confidence            345688999999999997542100    000000 00000000000134579999999999866 999999999877654


Q ss_pred             HHHHHHHhcCCCCcceEEEecCCCCCchhhhhhHHHHHHHHhcCCc--EEEEEcCCccccCC
Q 025203          179 YTVDNLIHVGYHGWASLELRGLEDEYKKVQQYKAQVRKRLVKEGYR--IWGVVGDQWSSFEG  238 (256)
Q Consensus       179 ~T~~~L~~~G~~~~~~lilr~~~~~~kp~~~~K~~~r~~l~~~g~~--i~~~iGD~~sDl~g  238 (256)
                      ...+.|...+.  +...+.|+.....  ...+.    +.|...|+.  -+++|.|+..-...
T Consensus        86 ~il~~ldp~~~--~~~~~~r~~c~~~--~~~~~----KdL~~l~~~l~~vvivDd~~~~~~~  139 (181)
T d1ta0a_          86 PVADLLDKWGA--FRARLFRESCVFH--RGNYV----KDLSRLGRDLRRVLILDNSPASYVF  139 (181)
T ss_dssp             HHHHHHCSSCC--EEEEECGGGSEEE--TTEEE----CCGGGSCSCGGGEEEECSCGGGGTT
T ss_pred             HHHHHhccCCc--eeEEEEeeeeeec--CCccc----ccHhhcCCCHHHeEEEcCChhhhhc
Confidence            45555533222  2333334332111  11111    233344543  47789998876654

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=93.62  E-value=0.026  Score=50.61  Aligned_cols=37  Identities=16%  Similarity=0.259  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHHHHHH
Q 025203          149 LEHTLNLFHEIKNRGVKIFLVSSRRESLRSYTVDNLI  185 (256)
Q Consensus       149 ~pg~~ell~~L~~~G~~i~ivTnR~~~~r~~T~~~L~  185 (256)
                      -|.+..+|++|++.|.++|++||.+-..-+.+.+.+-
T Consensus       187 ~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~  223 (458)
T d2bdea1         187 EKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYAL  223 (458)
T ss_dssp             CHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhc
Confidence            4788899999999999999999999877666666665

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=90.91  E-value=0.037  Score=44.72  Aligned_cols=44  Identities=16%  Similarity=-0.010  Sum_probs=31.0

Q ss_pred             CchhhhhhHHHHHHHHhcCCcEEEEEcCCcc-ccCCCC-CCCcEEEe
Q 025203          204 YKKVQQYKAQVRKRLVKEGYRIWGVVGDQWS-SFEGLP-KPKRTFKL  248 (256)
Q Consensus       204 ~kp~~~~K~~~r~~l~~~g~~i~~~iGD~~s-Dl~ga~-~g~r~fkl  248 (256)
                      +||.+.......+.+. ...+.+++|||++. |+.+|+ +|.+++-+
T Consensus       179 gKP~p~~~~~al~~l~-i~~~~~~mIGDs~~~DI~gA~~aG~~si~V  224 (253)
T d1wvia_         179 GKPEAVIMNKALDRLG-VKRHEAIMVGDNYLTDITAGIKNDIATLLV  224 (253)
T ss_dssp             STTSHHHHHHHHHHHT-SCGGGEEEEESCTTTTHHHHHHTTCEEEEE
T ss_pred             ccCCcccceehhhhcc-ccccceEEEcCChHHHHHHHHHCCCCEEEE
Confidence            4788866554444442 23356999999975 999884 89998876

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=87.93  E-value=0.075  Score=42.68  Aligned_cols=44  Identities=16%  Similarity=-0.092  Sum_probs=30.6

Q ss_pred             CCchhhhhhHHHHHHHHhcCC--cEEEEEcCCc-cccCCCC-CCCcEEEec
Q 025203          203 EYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQW-SSFEGLP-KPKRTFKLP  249 (256)
Q Consensus       203 ~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~-sDl~ga~-~g~r~fklP  249 (256)
                      .+||.+......   +++.|.  +.+++|||++ +|+.+|+ +|.+++-+.
T Consensus       174 ~~KP~p~~~~~a---~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~  221 (250)
T d2c4na1         174 VGKPSPWIIRAA---LNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVL  221 (250)
T ss_dssp             CSTTSTHHHHHH---HHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred             cccchhhhHhhh---hhhhcCCchheEEecCChHHHHHHHHHCCCCEEEEC
Confidence            457777554433   334454  4599999997 6999984 899988763

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=86.31  E-value=0.08  Score=42.48  Aligned_cols=43  Identities=12%  Similarity=0.067  Sum_probs=29.8

Q ss_pred             CCchhhhhhHHHHHHHHhcCC--cEEEEEcCCc-cccCCCC-CCCcEEEe
Q 025203          203 EYKKVQQYKAQVRKRLVKEGY--RIWGVVGDQW-SSFEGLP-KPKRTFKL  248 (256)
Q Consensus       203 ~~kp~~~~K~~~r~~l~~~g~--~i~~~iGD~~-sDl~ga~-~g~r~fkl  248 (256)
                      .+||.+......   ++..|.  +.+++|||++ +|+++|+ +|.+++.+
T Consensus       178 ~~KP~~~~~~~~---~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V  224 (253)
T d1yv9a1         178 IGKPKAIIMERA---IAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLV  224 (253)
T ss_dssp             CSTTSHHHHHHH---HHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEE
T ss_pred             ecccchhHHHHH---HHHhCCCccceEEecCChHHHHHHHHHCCCCEEEE
Confidence            357777554333   333454  4699999997 6999985 78888866