Citrus Sinensis ID: 025220

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
Protein Sequence
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRNLMELLPLVNDKLDDKV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHcccccccccccccccc
Coil and Loop (DISEMBL)
MSFVFCINIVLGNVSLRYIPVSfmqtiksftPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLhsykfdsintvyymaPFATMILSIPALLlegsgimdwlsthpspwsAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIfrnpisgmnaVGCAITLIGCTFYGYIRHllsqqpppgtprtprtprnlmellplvndklddkv
Flexible Loop (DISEMBL)
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLsqqpppgtprtprtprnlmellplvndklddkv
Low Complexity Region (SEG)
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQpppgtprtprtprNLMELLPLVNDKLDDKV
Disordered region (IsUnstruct)
**FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL*********************************
Disordered Region (DISOPRED)
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY****************************************
Disordered Region (DISEMBL)
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRNLMELLPLVNDKLDDKV
Disordered Region (DISPRO)
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQ*******************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRNLMELLPLVNDKLDDKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	256	2.2.26 [Sep-21-2011]
Q9C521	336	UDP-galactose transporter	yes	no	0.996	0.758	0.910	1e-132
Q9SFE9	341	GDP-mannose transporter G	no	no	0.996	0.747	0.875	1e-130
Q6DBP3	309	Probable sugar phosphate/	no	no	0.863	0.715	0.363	3e-31
Q9LDH3	361	Probable sugar phosphate/	no	no	0.882	0.626	0.359	1e-30
Q5XF09	308	Probable sugar phosphate/	no	no	0.863	0.717	0.363	2e-30
Q9FYE5	309	Probable sugar phosphate/	no	no	0.863	0.715	0.363	3e-29
Q9SS40	355	Probable sugar phosphate/	no	no	0.863	0.622	0.345	9e-29
Q7Z769	313	Solute carrier family 35	yes	no	0.875	0.715	0.295	3e-23
A4IFK2	313	Solute carrier family 35	yes	no	0.871	0.712	0.294	5e-23
Q1JQ66	313	Solute carrier family 35	yes	no	0.894	0.731	0.296	6e-23

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score =  470 bits (1210), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/257 (91%), Positives = 242/257 (94%), Gaps = 2/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 81  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 140

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 141 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 200

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            IPALLLEGSGI+ W   HP+PWSA III SSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 201 GIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 260

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAV+VSWLIFRNPIS MNAVGC ITL+GCTFYGY+RH+LSQQ  PGTPRTPRTPR+
Sbjct: 261 LKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQ-TPGTPRTPRTPRS 319

Query: 241 LMELLPLV-NDKLDDKV 256
            MELLPLV NDKL+ KV
Sbjct: 320 KMELLPLVNNDKLEGKV 336

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/256 (87%), Positives = 239/256 (93%), Gaps = 1/256 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGN+SLRYIPVSFMQTIKS TPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 87  MSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIWASLVPIVG 146

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTS+TELSFN+FGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 147 GILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 206

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            +PA LLE +GI+DW   HPSPWSA II+F+SGVLAFCLNFSIFYVI STTAVTFNVAGN
Sbjct: 207 GLPAFLLERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGN 266

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAV VSW+IFRNPIS MNAVGC ITL+GCTFYGY+RH+LSQQ  PGTPRTPRTPRN
Sbjct: 267 LKVAVAVFVSWMIFRNPISPMNAVGCGITLVGCTFYGYVRHMLSQQ-QPGTPRTPRTPRN 325

Query: 241 LMELLPLVNDKLDDKV 256
            MEL+PLVNDKL+ K+
Sbjct: 326 KMELIPLVNDKLESKI 341

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 2/223 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+ RK   W  + +LVP+V 
Sbjct: 83  LSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKKEAWLTYFTLVPVVT 142

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS--YKFDSINTVYYMAPFATM 118
           G+++ S  E SF++FGF   +    A + K++L   LL S   K +S+N + YMAP A +
Sbjct: 143 GVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVV 202

Query: 119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
           +L    L++E + +   ++     +     +  +  LA+ +N + F V + T+A+T  V 
Sbjct: 203 LLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYLVNLTNFLVTNHTSALTLQVL 262

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 221
           GN K AVAV+VS LIF+NP+S    +G ++T+ G   Y   + 
Sbjct: 263 GNAKGAVAVVVSILIFKNPVSVTGMLGYSLTVCGVILYSEAKK 305

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 129/231 (55%), Gaps = 5/231 (2%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           +S +FC+++V GN SLRYIPVSF Q I + TP  T V  +L+  K     ++ +L+P+V 
Sbjct: 131 LSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTEVYLALLPVVS 190

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL--HSYKFDSINTVYYMAPFATM 118
           GI+L S +E SF++FGF   +      + K+++   +L   S K  S+N + YMAP A  
Sbjct: 191 GIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNLLLYMAPMAAC 250

Query: 119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
           IL    L +EG+ +   +    +      ++  +  +A+ +N + F V   T+A+T  V 
Sbjct: 251 ILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTKHTSALTLQVL 310

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR---HLLSQQ 226
           GN K AVA  VS LIFRNP++ M   G  +T++G   Y   R    LL+Q+
Sbjct: 311 GNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKLLNQK 361

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score =  132 bits (332), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 129/223 (57%), Gaps = 2/223 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+  K   W  + +LVP+V 
Sbjct: 83  LSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTYFTLVPVVT 142

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS--YKFDSINTVYYMAPFATM 118
           G+++ S +E SF++FGF   +    A + K++L   LL S   K +S+N + YMAP A +
Sbjct: 143 GVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVV 202

Query: 119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
            L    L++E + +   ++     +     +  +  LA+ +N + F V   T+A+T  V 
Sbjct: 203 FLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVL 262

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 221
           GN K AVAV+VS LIFRNP+S    +G ++T+ G   Y   + 
Sbjct: 263 GNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKK 305

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 2/223 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +L+  K   W  + +LVP+V 
Sbjct: 84  LSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYGALVPVVA 143

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS--YKFDSINTVYYMAPFATM 118
           G+++ S  E  F+ FGF   +    A + K++L   LL S   K +S+N + YM+P A +
Sbjct: 144 GVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVI 203

Query: 119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
            L    L +E   I   L+        +I++  + V+A+  N   F V   T+A+T  V 
Sbjct: 204 ALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVL 263

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 221
           GN K AVAV++S LIF+NP++ M   G +IT++G   YG  + 
Sbjct: 264 GNAKGAVAVVISILIFQNPVTVMGIGGYSITVLGVVAYGETKR 306

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score =  127 bits (318), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 126/223 (56%), Gaps = 2/223 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +++  K   W  + +LVP+V 
Sbjct: 130 LSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALVPVVT 189

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHS--YKFDSINTVYYMAPFATM 118
           G+++ S  E  F+ FGF   +    A + K++L   LL S   + +S+N + YM+P A +
Sbjct: 190 GVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVI 249

Query: 119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
            L    + +E   +   L+        +I++  + V+A+  N   F V   T+A+T  V 
Sbjct: 250 ALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVL 309

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 221
           GN K AVAV++S L+FRNP++ M   G +IT++G   YG  + 
Sbjct: 310 GNAKGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYGETKR 352

Arabidopsis thaliana (taxid: 3702)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 13/237 (5%)

Query: 5   FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL 64
           FC  +V  N+SL+   +   Q  K+ T    + +Q   ++K F  RI  +L+PI  G++L
Sbjct: 84  FCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPITLGVIL 143

Query: 65  TSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPA 124
            S  ++ FN  G   A  G L TS   +   +  H  + +S+  +YY AP ++ +L +  
Sbjct: 144 NSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAV 203

Query: 125 LLLE---GSGIMDWLSTHPSPW--SAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAG 179
              E   G G +        PW  SA +++  SGV+AF +N SI+++I +T+ VT+N+ G
Sbjct: 204 PFFEPVFGEGGIF------GPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMFG 257

Query: 180 NLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPR 236
           + K  + +   +++F++P+S   A+G   TL G   Y + +  LS+Q    +    R
Sbjct: 258 HFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFK--LSEQEGSRSKLAQR 312

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score =  108 bits (269), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 122/238 (51%), Gaps = 15/238 (6%)

Query: 5   FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL 64
           FC  +V  N+SL+   +   Q  K+ T    +V+Q L ++K F  +I  +L+PI  G++L
Sbjct: 84  FCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIPITLGVIL 143

Query: 65  TSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPA 124
            S  ++ FN  G   A  G L TS   +   +  H  + +S+  +YY AP ++ +L +  
Sbjct: 144 NSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAMLLVAV 203

Query: 125 LLLE----GSGIMDWLSTHPSPW--SAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
              E      GI         PW  SA +++  SGV+AF +N SI+++I +T+ VT+N+ 
Sbjct: 204 PFFEPVFAEGGIF-------GPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTYNMF 256

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPR 236
           G+ K  + +   +++F++P+S    +G   TL G   Y + +  LS+Q    +    R
Sbjct: 257 GHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHFK--LSEQEGSKSKLVQR 312

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score =  107 bits (268), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%), Gaps = 14/243 (5%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           ++  FC  +V  N+SL+   +   Q  K  T    + +Q + +RK F  +I  +LVPI  
Sbjct: 80  LALSFCGFVVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKLTLVPITL 139

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           G++L S  ++ FN+ G   A  G L TS   +   +  H  + +S+  +YY AP ++  L
Sbjct: 140 GVILNSYYDVRFNLMGMIFATLGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAFL 199

Query: 121 SIPALLLE---GSGIMDWLSTHPSPWS--AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTF 175
            +     E   G G +        PWS  A  ++  SGV+AF +N SI+++I +T+ VT+
Sbjct: 200 LVLVPFFEPLTGDGGIF------GPWSFLALFMVLLSGVIAFLVNLSIYWIIGNTSPVTY 253

Query: 176 NVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTP 235
           N+ G+ K  + +L  +++F++P+S    +G   TL G   Y + +  L++Q   G  R  
Sbjct: 254 NMFGHFKFCITLLGGYVLFQDPLSLNQGLGILCTLTGILAYTHFK--LAEQ-EEGKSRLT 310

Query: 236 RTP 238
           + P
Sbjct: 311 QRP 313

Putative transporter.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
356552668	342	PREDICTED: UDP-galactose transporter 1-l	1.0	0.748	0.926	1e-135
356549087	342	PREDICTED: UDP-galactose transporter 1-l	1.0	0.748	0.918	1e-134
255550574	342	conserved hypothetical protein [Ricinus	1.0	0.748	0.918	1e-133
388508342	342	unknown [Medicago truncatula]	1.0	0.748	0.894	1e-131
297789749	336	hypothetical protein ARALYDRAFT_497286 [	0.996	0.758	0.918	1e-131
357438617	342	Solute carrier family 35 member E3 [Medi	1.0	0.748	0.894	1e-131
18411611	336	EamA-like transporter [Arabidopsis thali	0.996	0.758	0.910	1e-130
297845176	341	hypothetical protein ARALYDRAFT_313079 [	0.996	0.747	0.886	1e-130
225459544	340	PREDICTED: UDP-galactose transporter 1 i	0.996	0.75	0.890	1e-129
357461519	340	Solute carrier family 35 member E3 [Medi	0.988	0.744	0.890	1e-129

>gi|356552668|ref|XP_003544685.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/257 (92%), Positives = 249/257 (96%), Gaps = 1/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASL+PIVG
Sbjct: 86  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVG 145

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFN FGFCAAL GCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 146 GILLTSVTELSFNAFGFCAALLGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 205

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
           +IPALLLEG+G+++WLSTHP PWSA IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 206 AIPALLLEGNGVLEWLSTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 265

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPP-PGTPRTPRTPR 239
           LKVAVAVLVSWLIFRNPIS +N+VGCA+TL+GCTFYGY+RHLLSQQPP PGTPRTPRTPR
Sbjct: 266 LKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHLLSQQPPVPGTPRTPRTPR 325

Query: 240 NLMELLPLVNDKLDDKV 256
           N MELLPLVNDKLDDKV
Sbjct: 326 NKMELLPLVNDKLDDKV 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549087|ref|XP_003542929.1| PREDICTED: UDP-galactose transporter 1-like [Glycine max]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/257 (91%), Positives = 249/257 (96%), Gaps = 1/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASL+PIVG
Sbjct: 86  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVG 145

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFN FGFCAAL GCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 146 GILLTSVTELSFNAFGFCAALLGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 205

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
           +IPALLLEG+G+++WLSTHP PWSA IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 206 AIPALLLEGNGVLEWLSTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 265

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPP-PGTPRTPRTPR 239
           LKVAVAVLVSWLIFRNPIS +N+VGCA+TL+GCTFYGY+RH+LSQQPP PGTPRTPRTPR
Sbjct: 266 LKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHMLSQQPPVPGTPRTPRTPR 325

Query: 240 NLMELLPLVNDKLDDKV 256
           + MELLPLVNDKLDDKV
Sbjct: 326 SKMELLPLVNDKLDDKV 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550574|ref|XP_002516337.1| conserved hypothetical protein [Ricinus communis] gi|223544567|gb|EEF46084.1| conserved hypothetical protein [Ricinus communis]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/257 (91%), Positives = 245/257 (95%), Gaps = 1/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFC+NIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 86  MSFVFCVNIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 145

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 146 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 205

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            +PA+LLEGSG++DW  TH S  S+ IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 206 GVPAMLLEGSGVVDWFYTHQSVGSSLIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 265

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPP-GTPRTPRTPR 239
           LKVAVAVLVSWLIFRNPIS MNAVGC ITL+GCTFYGY+RHLL+QQPPP GTPRTPRTPR
Sbjct: 266 LKVAVAVLVSWLIFRNPISAMNAVGCGITLVGCTFYGYVRHLLAQQPPPSGTPRTPRTPR 325

Query: 240 NLMELLPLVNDKLDDKV 256
           N MELLPLVNDKLDDKV
Sbjct: 326 NRMELLPLVNDKLDDKV 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508342|gb|AFK42237.1| unknown [Medicago truncatula]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/257 (89%), Positives = 246/257 (95%), Gaps = 1/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 86  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 145

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTS+TELSFNMFGFCAALFGCLATSTKTILAE+LLH YKFDSINTVY+MAPFAT+I+
Sbjct: 146 GILLTSITELSFNMFGFCAALFGCLATSTKTILAEALLHGYKFDSINTVYHMAPFATLIM 205

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
             PALLLEG+GI++W S HP PW+A IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 206 VFPALLLEGNGILEWFSVHPYPWAAMIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 265

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPP-PGTPRTPRTPR 239
           LKVAVAVL+SWLIFRNPIS MNAVGCAITL+GCTFYGY+R+++SQQP  PGTPRTPRTPR
Sbjct: 266 LKVAVAVLISWLIFRNPISYMNAVGCAITLVGCTFYGYVRNMISQQPAVPGTPRTPRTPR 325

Query: 240 NLMELLPLVNDKLDDKV 256
           + MELLPLVNDKLDDKV
Sbjct: 326 SKMELLPLVNDKLDDKV 342

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297789749|ref|XP_002862808.1| hypothetical protein ARALYDRAFT_497286 [Arabidopsis lyrata subsp. lyrata] gi|297308543|gb|EFH39066.1| hypothetical protein ARALYDRAFT_497286 [Arabidopsis lyrata subsp. lyrata]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/257 (91%), Positives = 243/257 (94%), Gaps = 2/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 81  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 140

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 141 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 200

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            IPALLLEGSGI+ W   HP+PWSA IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 201 GIPALLLEGSGILSWFEAHPAPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 260

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAVLVSWLIFRNPIS MNAVGC ITL+GCTFYGY+RH+LSQQ  PGTPRTPRTPR+
Sbjct: 261 LKVAVAVLVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQ-TPGTPRTPRTPRS 319

Query: 241 LMELLPLV-NDKLDDKV 256
            MELLPLV NDKL+ KV
Sbjct: 320 KMELLPLVNNDKLEGKV 336

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438617|ref|XP_003589584.1| Solute carrier family 35 member E3 [Medicago truncatula] gi|355478632|gb|AES59835.1| Solute carrier family 35 member E3 [Medicago truncatula]

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/257 (89%), Positives = 246/257 (95%), Gaps = 1/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 86  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 145

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTS+TELSFNMFGFCAALFGCLATSTKTILAE+LLH YKFDSINTVY+MAPFAT+I+
Sbjct: 146 GILLTSITELSFNMFGFCAALFGCLATSTKTILAEALLHGYKFDSINTVYHMAPFATLIM 205

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
             PALLLEG+GI++W S HP PW+A IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 206 VFPALLLEGNGILEWFSIHPYPWAAMIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 265

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPP-PGTPRTPRTPR 239
           LKVAVAVL+SWLIFRNPIS MNAVGCAITL+GCTFYGY+R+++SQQP  PGTPRTPRTPR
Sbjct: 266 LKVAVAVLISWLIFRNPISYMNAVGCAITLVGCTFYGYVRNMISQQPAVPGTPRTPRTPR 325

Query: 240 NLMELLPLVNDKLDDKV 256
           + MELLPLVNDKLDDKV
Sbjct: 326 SKMELLPLVNDKLDDKV 342

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411611|ref|NP_565158.1| EamA-like transporter [Arabidopsis thaliana] gi|75168880|sp|Q9C521.1|UGAL1_ARATH RecName: Full=UDP-galactose transporter 1; Short=At-UDP-GalT1 gi|12323396|gb|AAG51677.1|AC010704_21 unknown protein; 76010-78007 [Arabidopsis thaliana] gi|13430498|gb|AAK25871.1|AF360161_1 unknown protein [Arabidopsis thaliana] gi|21281058|gb|AAM44935.1| unknown protein [Arabidopsis thaliana] gi|46934764|emb|CAG18176.1| UDP-galactose transporter [Arabidopsis thaliana] gi|332197879|gb|AEE36000.1| EamA-like transporter [Arabidopsis thaliana]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/257 (91%), Positives = 242/257 (94%), Gaps = 2/257 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct: 81  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 140

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 141 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 200

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            IPALLLEGSGI+ W   HP+PWSA III SSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 201 GIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 260

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAV+VSWLIFRNPIS MNAVGC ITL+GCTFYGY+RH+LSQQ  PGTPRTPRTPR+
Sbjct: 261 LKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQ-TPGTPRTPRTPRS 319

Query: 241 LMELLPLV-NDKLDDKV 256
            MELLPLV NDKL+ KV
Sbjct: 320 KMELLPLVNNDKLEGKV 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845176|ref|XP_002890469.1| hypothetical protein ARALYDRAFT_313079 [Arabidopsis lyrata subsp. lyrata] gi|297336311|gb|EFH66728.1| hypothetical protein ARALYDRAFT_313079 [Arabidopsis lyrata subsp. lyrata]

 Score =  468 bits (1205), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/256 (88%), Positives = 242/256 (94%), Gaps = 1/256 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGN+SLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYF+WRIWASLVPIVG
Sbjct: 87  MSFVFCINIVLGNISLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFEWRIWASLVPIVG 146

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTS+TELSFN+FGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 147 GILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 206

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            +PA LLEG+GI++W   HPSPWSA IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 207 GLPAFLLEGNGILNWFEAHPSPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 266

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAVLVSW+IF+NPIS MNAVGC ITL+GCTFYGY+RH+LSQQ  PGTPRTPR PRN
Sbjct: 267 LKVAVAVLVSWMIFKNPISPMNAVGCGITLVGCTFYGYVRHMLSQQ-QPGTPRTPRNPRN 325

Query: 241 LMELLPLVNDKLDDKV 256
            MEL+PLVNDKL+ KV
Sbjct: 326 KMELIPLVNDKLESKV 341

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459544|ref|XP_002285850.1| PREDICTED: UDP-galactose transporter 1 isoform 1 [Vitis vinifera] gi|225459546|ref|XP_002285851.1| PREDICTED: UDP-galactose transporter 1 isoform 2 [Vitis vinifera] gi|147794987|emb|CAN67423.1| hypothetical protein VITISV_006650 [Vitis vinifera] gi|302141824|emb|CBI19027.3| unnamed protein product [Vitis vinifera]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 228/256 (89%), Positives = 243/256 (94%), Gaps = 1/256 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW+VWRKYF+WRIWASLVPIVG
Sbjct: 86  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWMVWRKYFEWRIWASLVPIVG 145

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct: 146 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 205

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
           ++PA++LEG G++DW  TH S   A IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 206 AVPAMVLEGPGVIDWFQTHESIGPALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 265

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAV+VSWLIFRNPIS +NAVGC++TL+GCTFYGY+RH LSQQ PPGTPRTPRTPR+
Sbjct: 266 LKVAVAVMVSWLIFRNPISAINAVGCSVTLVGCTFYGYVRHKLSQQ-PPGTPRTPRTPRS 324

Query: 241 LMELLPLVNDKLDDKV 256
            MELLPLVNDKLDDKV
Sbjct: 325 RMELLPLVNDKLDDKV 340

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461519|ref|XP_003601041.1| Solute carrier family 35 member E3 [Medicago truncatula] gi|355490089|gb|AES71292.1| Solute carrier family 35 member E3 [Medicago truncatula]

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/255 (89%), Positives = 243/255 (95%), Gaps = 2/255 (0%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASL+PIVG
Sbjct: 87  MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVG 146

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           GILLTSVTE+SFNMFGFCAAL GCLATSTKTILAESLLH YKFDSINTVYYMAP+ATMIL
Sbjct: 147 GILLTSVTEMSFNMFGFCAALLGCLATSTKTILAESLLHGYKFDSINTVYYMAPYATMIL 206

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
            +PA+LLEG+G+++WL+THP PWSA IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct: 207 VLPAMLLEGNGVLEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 266

Query: 181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPPPGTPRTPRTPRN 240
           LKVAVAVLVSWLIFRNPIS +NAVGCAITL+GCTFYGY+RHLLSQQPP   P TPRTPR+
Sbjct: 267 LKVAVAVLVSWLIFRNPISYLNAVGCAITLVGCTFYGYVRHLLSQQPP--VPGTPRTPRS 324

Query: 241 LMELLPLVNDKLDDK 255
            ME LPLVNDKL++K
Sbjct: 325 KMESLPLVNDKLENK 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
TAIR|locus:2204690	336	AT1G77610 [Arabidopsis thalian	0.996	0.758	0.867	2.7e-116
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.996	0.747	0.832	3.5e-114
DICTYBASE|DDB_G0287319	348	DDB_G0287319 "TPT transporter	0.847	0.623	0.371	2.7e-36
TAIR|locus:2166384	309	AT5G05820 [Arabidopsis thalian	0.835	0.692	0.386	3.6e-34
TAIR|locus:2074713	308	AT3G11320 [Arabidopsis thalian	0.835	0.694	0.386	1.2e-33
TAIR|locus:2034730	361	AT1G12500 [Arabidopsis thalian	0.878	0.623	0.366	2.3e-32
TAIR|locus:2146683	309	AT5G04160 "AT5G04160" [Arabido	0.847	0.702	0.369	3.7e-32
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.847	0.611	0.351	4.2e-31
UNIPROTKB|A4IFK2	313	SLC35E3 "Solute carrier family	0.843	0.690	0.304	1.5e-26
UNIPROTKB|Q7Z769	313	SLC35E3 "Solute carrier family	0.851	0.696	0.298	2.5e-26

TAIR|locus:2204690 AT1G77610 [Arabidopsis thaliana (taxid:3702)]

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 223/257 (86%), Positives = 230/257 (89%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct:    81 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 140

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
             GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct:   141 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 200

Query:   121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
              IPALLLEGSGI+ W   HP+PWSA III SSGVLAFCLNFSIFYVIHSTTAVTFNVAGN
Sbjct:   201 GIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 260

Query:   181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQXXXXXXXXXXXXXN 240
             LKVAVAV+VSWLIFRNPIS MNAVGC ITL+GCTFYGY+RH+LSQQ              
Sbjct:   261 LKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVRHMLSQQTPGTPRTPRTPRSK 320

Query:   241 LMELLPLVN-DKLDDKV 256
              MELLPLVN DKL+ KV
Sbjct:   321 -MELLPLVNNDKLEGKV 336

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
 Identities = 213/256 (83%), Positives = 228/256 (89%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             MSFVFCINIVLGN+SLRYIPVSFMQTIKS TPATTVVLQWLVWRKYFDWRIWASLVPIVG
Sbjct:    87 MSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWRIWASLVPIVG 146

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
             GILLTS+TELSFN+FGFCAALFGCLATSTKTILAESLLH YKFDSINTVYYMAPFATMIL
Sbjct:   147 GILLTSITELSFNVFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMIL 206

Query:   121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGN 180
              +PA LLE +GI+DW   HPSPWSA II+F+SGVLAFCLNFSIFYVI STTAVTFNVAGN
Sbjct:   207 GLPAFLLERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGN 266

Query:   181 LKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQXXXXXXXXXXXXXN 240
             LKVAVAV VSW+IFRNPIS MNAVGC ITL+GCTFYGY+RH+LSQQ             N
Sbjct:   267 LKVAVAVFVSWMIFRNPISPMNAVGCGITLVGCTFYGYVRHMLSQQQPGTPRTPRTPR-N 325

Query:   241 LMELLPLVNDKLDDKV 256
              MEL+PLVNDKL+ K+
Sbjct:   326 KMELIPLVNDKLESKI 341

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

DICTYBASE|DDB_G0287319 DDB_G0287319 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 85/229 (37%), Positives = 141/229 (61%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVW------RKYFDWRIWAS 54
             +S +FC NIV GNVSLR++PVSFMQT+KS  P  TV+L  L +      +  F    + S
Sbjct:    90 LSILFCSNIVFGNVSLRWVPVSFMQTVKSSVPLFTVILTTLFFSNIGGKKTTFTRGTYLS 149

Query:    55 LVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAP 114
             ++PIVGG+ + S++E++FN  GF AAL   + ++   I++  L+ + + +++N +YYM+P
Sbjct:   150 MIPIVGGVCVASLSEVNFNQAGFIAALASSILSAVFAIVS-GLILTQQMNAVNLLYYMSP 208

Query:   115 FATMILSIPALLLEGSGIM-DW-LSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTA 172
              +  +L   +  +E + I  +W L     P    +I+  SG++AF LN   F VI  T+ 
Sbjct:   209 ISCCLLFPLSAFMEWNAIANEWPLYGESKP---IVILLLSGLIAFLLNTFTFLVIKLTSP 265

Query:   173 VTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH 221
             +T+ V+GNLKV +++ +S L+F+N  +  N +GCAI ++G   Y  I++
Sbjct:   266 LTYTVSGNLKVVLSISISILVFKNETNFFNVLGCAIAIMGVVCYSNIKY 314

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2166384 AT5G05820 [Arabidopsis thaliana (taxid:3702)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 85/220 (38%), Positives = 137/220 (62%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+ RK   W  + +LVP+V 
Sbjct:    83 LSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKKEAWLTYFTLVPVVT 142

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATM 118
             G+++ S  E SF++FGF   +    A + K++L   LL S   K +S+N + YMAP A +
Sbjct:   143 GVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVV 202

Query:   119 ILSIPA-LLLEGSGIMDWLSTHPSPWS-AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFN 176
             +L +PA L++E + +   ++     +   + ++F+S  LA+ +N + F V + T+A+T  
Sbjct:   203 LL-LPATLIMEKNVVGITIALARDDFRIVWYLLFNSA-LAYLVNLTNFLVTNHTSALTLQ 260

Query:   177 VAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY 216
             V GN K AVAV+VS LIF+NP+S    +G ++T+ G   Y
Sbjct:   261 VLGNAKGAVAVVVSILIFKNPVSVTGMLGYSLTVCGVILY 300

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 85/220 (38%), Positives = 135/220 (61%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             +S VFC+++V GN+SLR++PVSF Q I + TP  T V  +L+  K   W  + +LVP+V 
Sbjct:    83 LSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKREAWLTYFTLVPVVT 142

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATM 118
             G+++ S +E SF++FGF   +    A + K++L   LL S   K +S+N + YMAP A +
Sbjct:   143 GVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVV 202

Query:   119 ILSIPA-LLLEGSGIMDWLSTHPSPWS-AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFN 176
              L +PA L++E + +   ++     +   + ++F+S  LA+ +N + F V   T+A+T  
Sbjct:   203 FL-LPATLIMEKNVVGITIALARDDFRIVWYLLFNSA-LAYFVNLTNFLVTKHTSALTLQ 260

Query:   177 VAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY 216
             V GN K AVAV+VS LIFRNP+S    +G ++T+ G   Y
Sbjct:   261 VLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILY 300

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2034730 AT1G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 85/232 (36%), Positives = 130/232 (56%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             +S +FC+++V GN SLRYIPVSF Q I + TP  T V  +L+  K     ++ +L+P+V 
Sbjct:   131 LSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTEVYLALLPVVS 190

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL--HSYKFDSINTVYYMAPFATM 118
             GI+L S +E SF++FGF   +      + K+++   +L   S K  S+N + YMAP A  
Sbjct:   191 GIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNLLLYMAPMAAC 250

Query:   119 ILSIPALLLEGSGIMDWLS-THPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNV 177
             IL    L +EG+ +   +      P   F++   +  +A+ +N + F V   T+A+T  V
Sbjct:   251 ILLPFTLYIEGNVLRVLIEKARTDPLIIFLLA-GNATVAYLVNLTNFLVTKHTSALTLQV 309

Query:   178 AGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH---LLSQQ 226
              GN K AVA  VS LIFRNP++ M   G  +T++G   Y   R    LL+Q+
Sbjct:   310 LGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKLLNQK 361

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

TAIR|locus:2146683 AT5G04160 "AT5G04160" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 81/219 (36%), Positives = 125/219 (57%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +L+  K   W  + +LVP+V 
Sbjct:    84 LSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYGALVPVVA 143

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATM 118
             G+++ S  E  F+ FGF   +    A + K++L   LL S   K +S+N + YM+P A +
Sbjct:   144 GVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVI 203

Query:   119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
              L    L +E   I   L+        +I++  + V+A+  N   F V   T+A+T  V 
Sbjct:   204 ALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVL 263

Query:   179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 217
             GN K AVAV++S LIF+NP++ M   G +IT++G   YG
Sbjct:   264 GNAKGAVAVVISILIFQNPVTVMGIGGYSITVLGVVAYG 302

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 77/219 (35%), Positives = 125/219 (57%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             +S VFC ++V GN+SLRY+PVSF Q + + TP  T +  +++  K   W  + +LVP+V 
Sbjct:   130 LSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALVPVVT 189

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATM 118
             G+++ S  E  F+ FGF   +    A + K++L   LL S   + +S+N + YM+P A +
Sbjct:   190 GVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVI 249

Query:   119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
              L    + +E   +   L+        +I++  + V+A+  N   F V   T+A+T  V 
Sbjct:   250 ALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVL 309

Query:   179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG 217
             GN K AVAV++S L+FRNP++ M   G +IT++G   YG
Sbjct:   310 GNAKGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYG 348

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

UNIPROTKB|A4IFK2 SLC35E3 "Solute carrier family 35 member E3" [Bos taurus (taxid:9913)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 71/233 (30%), Positives = 126/233 (54%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             ++  FC  +V  N+SL+   +   Q  K+ T    +V+Q L ++K F  +I  +L+PI  
Sbjct:    80 LALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRLTLIPITL 139

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPF--ATM 118
             G++L S  ++ FN  G   A  G L TS   +   +  H  + +S+  +YY AP   A +
Sbjct:   140 GVILNSYYDVKFNFLGTVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAML 199

Query:   119 ILSIP---ALLLEGSGIMDWLSTHPSPWS--AFIIIFSSGVLAFCLNFSIFYVIHSTTAV 173
             ++++P    +  EG GI         PWS  A +++  SGV+AF +N SI+++I +T+ V
Sbjct:   200 LVAVPFFEPVFAEG-GIF-------GPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPV 251

Query:   174 TFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQ 226
             T+N+ G+ K  + +   +++F++P+S    +G   TL G   Y + +  LS+Q
Sbjct:   252 TYNMFGHFKFCITLFGGYVLFKDPLSINQGLGMLCTLFGILAYTHFK--LSEQ 302

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q7Z769 SLC35E3 "Solute carrier family 35 member E3" [Homo sapiens (taxid:9606)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 69/231 (29%), Positives = 122/231 (52%)

Query:     1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
             ++  FC  +V  N+SL+   +   Q  K+ T    + +Q   ++K F  RI  +L+PI  
Sbjct:    80 LALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPITL 139

Query:    61 GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
             G++L S  ++ FN  G   A  G L TS   +   +  H  + +S+  +YY AP ++ +L
Sbjct:   140 GVILNSYYDVKFNFLGMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAPMSSAML 199

Query:   121 SIPALLLE---GSGIMDWLSTHPSPWS--AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTF 175
              +     E   G G +        PWS  A +++  SGV+AF +N SI+++I +T+ VT+
Sbjct:   200 LVAVPFFEPVFGEGGIF------GPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTY 253

Query:   176 NVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQ 226
             N+ G+ K  + +   +++F++P+S   A+G   TL G   Y + +  LS+Q
Sbjct:   254 NMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFK--LSEQ 302

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C521	UGAL1_ARATH	No assigned EC number	0.9105	0.9960	0.7589	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	256
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	2e-24
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	8e-22
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	2e-20
pfam08449	303	pfam08449, UAA, UAA transporter family	4e-12
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	5e-05
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	4e-04
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	0.002

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 94.5 bits (236), Expect = 2e-24
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 6/149 (4%)

Query: 76  GFCAALFGCLATSTKTILAESLLHS---YKFDSINTVYYMAPFATMILSIPALLLEGSGI 132
           GF  AL      + + IL++ LL      K + +  +YY++P A ++L    L  EG  +
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 133 M---DWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLV 189
                            +++  SGVLAF  N S F ++  T+ +T +VAG +K  V +++
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 190 SWLIFRNPISGMNAVGCAITLIGCTFYGY 218
           S +IF +P++ +N +G AI ++G   Y Y
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 91.7 bits (228), Expect = 8e-22
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 5/221 (2%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           ++ V  I  V  NVSL  + VSF  TIK+  P  +VVL      + F   +W SL+PIVG
Sbjct: 71  VAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVG 130

Query: 61  GILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL 120
           G+ L S TELSFN  GF +A+   +   ++ I ++  +     D  N   Y++  +  +L
Sbjct: 131 GVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLL 190

Query: 121 SIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSI-----FYVIHSTTAVTF 175
           S PA + EG   +               I++  ++A    F       F ++   + +T 
Sbjct: 191 SPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTH 250

Query: 176 NVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY 216
           +V   +K  V ++VS L F   IS     G  I + G   Y
Sbjct: 251 SVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 88.3 bits (219), Expect = 2e-20
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)

Query: 21  VSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAA 80
           VSF   +K+  P  T +L  L  +++ +   + SL+PIVGG+ L SV EL F    F  A
Sbjct: 140 VSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCA 199

Query: 81  LFGCLATSTKTILAESLLHSYKFD----SINTVYYMAPFATMILSIP-ALLLEGSGIMDW 135
           +   L +S ++I A+  + +        + + +Y +      ++S+P  L  EG   +  
Sbjct: 200 MLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPV 259

Query: 136 LSTHP---SPWSAFIIIFS---SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLV 189
            + +    + ++  IIIF    SGV  +  N   FY +     VT  VA  LK  V ++ 
Sbjct: 260 WTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVS 319

Query: 190 SWLIFRNPISGMNAVGCAITLIGCTFY 216
           S +IF+  ++ +  +G A+ ++G   Y
Sbjct: 320 SIIIFQTQVTLLGYLGMAVAILGALLY 346

Length = 350

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 12/231 (5%)

Query: 1   MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVG 60
           +   F ++ VL N +L+YI        KS      ++L  L++ K +    + S + I  
Sbjct: 70  IVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITL 129

Query: 61  GILL---------TSVTELSF-NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVY 110
           G+++          +    +F +  G        L  +      E L   Y   S   ++
Sbjct: 130 GVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLYKKYGKHSKEMMF 189

Query: 111 YMAPFATMILSIPALLLEGSGIMD-WLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHS 169
           Y    +     +  L +    +          P   F ++ +S        F +FY+I  
Sbjct: 190 YSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFF-VFYLISE 248

Query: 170 TTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR 220
             A+T  +   L+  V++L+S L+F NP++    +G  +  +G   Y Y++
Sbjct: 249 FGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAYLK 299

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 14/215 (6%)

Query: 3   FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY-FDWRIWASLVPIVGG 61
               +  +L  ++L+Y   S    I    P  T +L  L+             ++  + G
Sbjct: 78  LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAG 137

Query: 62  ---ILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATM 118
              ILL        ++ G   AL   L  +  T L + L                  A +
Sbjct: 138 VLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS----------RLGPVTLALL 187

Query: 119 ILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVA 178
           +  + ALLL     +          +  ++++             +Y +    A    + 
Sbjct: 188 LQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALL 247

Query: 179 GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGC 213
             L+   A L+  L+   P+S    +G A+ ++G 
Sbjct: 248 SLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGV 282

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 31/183 (16%), Positives = 72/183 (39%), Gaps = 10/183 (5%)

Query: 14  VSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIW-ASLVPIVGGILLTSVTELSF 72
           V+++ +PV     +    P    +L  L+ ++     +  A+++ + G +LL S   LS 
Sbjct: 66  VAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSI 125

Query: 73  NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGI 132
           N  G    L   ++ +  T+L + L+     + +    ++     ++L   A  L  +  
Sbjct: 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ 185

Query: 133 MDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF-YVIHSTTAVTFNVAGNLKVAVAVLVSW 191
                     W A + +   G++   L + ++   +        ++    +  VA+L+  
Sbjct: 186 AL-----SLQWGALLYL---GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGL 237

Query: 192 LIF 194
           LI 
Sbjct: 238 LIL 240

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 40/238 (16%), Positives = 90/238 (37%), Gaps = 17/238 (7%)

Query: 2   SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKY--------FDWRIWA 53
           SF+  + I   + SL+Y+ V      K+ T       + L +           F   + +
Sbjct: 75  SFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLS 134

Query: 54  SLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMA 113
           S+V   G    ++      N  G+      CL+++   ++    +    F   +T++Y  
Sbjct: 135 SVVATWGDQQASAFKAQILNP-GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFY-- 191

Query: 114 PFATMILSIPALLLEGSGIMDWLSTHPS---PWSAFIIIFSSGVLAFCLNFSIFYVIHST 170
                +LS+P LL       DW   + +      + + +F SG+ +  +++   + +  T
Sbjct: 192 ---NNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVT 248

Query: 171 TAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPP 228
           ++ T+++ G L      L   + F  P++ ++     +  +    Y   +    Q   
Sbjct: 249 SSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK 306

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	256
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.94
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.92
PRK11689	295	aromatic amino acid exporter; Provisional	99.92
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.92
PRK15430	296	putative chloramphenical resistance permease RarD;	99.91
PRK11272	292	putative DMT superfamily transporter inner membran	99.89
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.89
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.88
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.88
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.85
KOG1580	337	consensus UDP-galactose transporter related protei	99.82
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.81
KOG2765	416	consensus Predicted membrane protein [Function unk	99.81
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.81
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.81
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.8
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.78
COG2962	293	RarD Predicted permeases [General function predict	99.78
KOG1581	327	consensus UDP-galactose transporter related protei	99.78
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.76
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.75
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.74
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.74
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.69
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.63
KOG2766	336	consensus Predicted membrane protein [Function unk	99.61
KOG1582	367	consensus UDP-galactose transporter related protei	99.6
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.4
COG2510	140	Predicted membrane protein [Function unknown]	99.32
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.3
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.27
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.09
PRK15430	296	putative chloramphenical resistance permease RarD;	99.06
PLN00411	358	nodulin MtN21 family protein; Provisional	98.94
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.93
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.92
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.66
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.56
PRK11689	295	aromatic amino acid exporter; Provisional	98.55
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.54
PRK11272	292	putative DMT superfamily transporter inner membran	98.52
COG2962	293	RarD Predicted permeases [General function predict	98.5
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.47
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.46
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.43
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.35
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.31
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.31
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.28
PRK13499	345	rhamnose-proton symporter; Provisional	98.2
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.14
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.13
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.13
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	98.06
COG2510	140	Predicted membrane protein [Function unknown]	98.01
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.96
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.9
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.82
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.72
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.69
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.66
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.64
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.6
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.52
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.52
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.47
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.37
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.34
PRK11431	105	multidrug efflux system protein; Provisional	97.31
COG2076	106	EmrE Membrane transporters of cations and cationic	97.25
PRK11431	105	multidrug efflux system protein; Provisional	97.25
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.18
PRK13499	345	rhamnose-proton symporter; Provisional	97.11
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.08
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.0
COG2076	106	EmrE Membrane transporters of cations and cationic	96.96
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.9
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.67
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.38
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.31
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.61
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.51
KOG2765	416	consensus Predicted membrane protein [Function unk	95.33
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.3
KOG1580	337	consensus UDP-galactose transporter related protei	95.07
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.26
KOG1581	327	consensus UDP-galactose transporter related protei	93.44
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.43
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.06
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.02
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	92.63
KOG3912	372	consensus Predicted integral membrane protein [Gen	90.54
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	87.45
PRK02237	109	hypothetical protein; Provisional	84.4
KOG2922	335	consensus Uncharacterized conserved protein [Funct	84.1
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	82.82
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	82.69
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	82.15
COG1742	109	Uncharacterized conserved protein [Function unknow	81.92
PF07168	336	Ureide_permease: Ureide permease; InterPro: IPR009	81.76
PRK02237	109	hypothetical protein; Provisional	81.1
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	80.83

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=3.8e-30  Score=216.55  Aligned_cols=222  Identities=28%  Similarity=0.455  Sum_probs=184.2

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL   81 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l   81 (256)
                      |++++....+.|.+++|++++++++++++.|+++++++++++|||++++++.+++++++|+.+....+.+.+..|+++++
T Consensus        72 g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l  151 (302)
T TIGR00817        72 AIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAM  151 (302)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHH
Confidence            67788999999999999999999999999999999999999999999999999999999998876666666778999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchh--hhhcc--CCCChhHHHHHHHHHH-HH
Q 025220           82 FGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIM--DWLST--HPSPWSAFIIIFSSGV-LA  156 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~-~~  156 (256)
                      .+++++|++.++.||..++++.|+.++..|+...+.+.++|.....|+.+..  ++...  .......+......+. +.
T Consensus       152 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (302)
T TIGR00817       152 ISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFF  231 (302)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHH
Confidence            9999999999999998765568999999999999999999988776654321  11110  0011112222323333 33


Q ss_pred             HHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          157 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      ...+...+..+++++|.++++..+++|++++++|++++||++++.+++|+++++.|+.+|++.|.+|
T Consensus       232 ~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~  298 (302)
T TIGR00817       232 HFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK  298 (302)
T ss_pred             HHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence            3455667788999999999999999999999999999999999999999999999999999765433

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=3.7e-28  Score=207.67  Aligned_cols=218  Identities=26%  Similarity=0.437  Sum_probs=186.5

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL   81 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l   81 (256)
                      |+++...+...+.|+++++++++++++++.|+++++++++++|||++++++.+++++++|+.+...++.+.++.|+++++
T Consensus       121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l  200 (350)
T PTZ00343        121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAM  200 (350)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHH
Confidence            56666667778899999999999999999999999999999999999999999999999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHHHHhccC-----CCChHHHHHHHhHHHHHHHHHHHHHhcCcchhh-hh----ccCC-CChhHHHHHH
Q 025220           82 FGCLATSTKTILAESLLHSY-----KFDSINTVYYMAPFATMILSIPALLLEGSGIMD-WL----STHP-SPWSAFIIIF  150 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~-~~~~~~~~~~  150 (256)
                      ++++++|.+.++.||..++.     +.++.++..+..+++.++++|.....|...... +.    .... .....+..++
T Consensus       201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~  280 (350)
T PTZ00343        201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF  280 (350)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence            99999999999999988643     367887888889999999999887776543211 10    0011 1122344566


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          151 SSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      .+++..++++...|..+++++|.++++.++++|++++++|++++||++++.+++|.++++.|+.+|++.
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            778888888888999999999999999999999999999999999999999999999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=9.4e-29  Score=204.25  Aligned_cols=223  Identities=43%  Similarity=0.686  Sum_probs=198.0

Q ss_pred             CchHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHH
Q 025220            1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAA   80 (256)
Q Consensus         1 l~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~   80 (256)
                      +|++++...+++|.++.++|++++|++++++|+++.++++++.+|++++..+.+++..+.|+.+.+..|.++++.|.+.+
T Consensus        89 l~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a  168 (316)
T KOG1441|consen   89 LGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISA  168 (316)
T ss_pred             HHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHhHHHHHHHH-HHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHH
Q 025220           81 LFGCLATSTKTILAESLL--HSYKFDSINTVYYMAPFATMILS-IPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  157 (256)
Q Consensus        81 l~a~~~~a~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (256)
                      +++.+.+++++++.|+..  ++++.|+++++.|+.+++...++ |.....|+.....+ .........+ ...+..++++
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~sv~~f  246 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGF-LTAPWFVTFL-ILLLNSVLAF  246 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeee-eccccchhhH-HHHHHHHHHH
Confidence            999999999999999999  46789999999999999999998 77777666543111 1111122223 3444449999


Q ss_pred             HHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccccC
Q 025220          158 CLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQ  225 (256)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~  225 (256)
                      ++|...|+++.++||++.++.+.+|.++.+..|+++|++++++.+..|+++.+.|+.+|++.|.++.+
T Consensus       247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999998876544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=2.2e-26  Score=196.22  Aligned_cols=212  Identities=12%  Similarity=0.197  Sum_probs=165.2

Q ss_pred             HHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHH------hccccChhhhhhhhhhhhceeEeeec-cc---------
Q 025220            7 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLV------WRKYFDWRIWASLVPIVGGILLTSVT-EL---------   70 (256)
Q Consensus         7 ~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~------~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~---------   70 (256)
                      +...+.+.+++|++++++.++.++.|++++++++++      +|||++++++.|+++++.|+.++... +.         
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            455578999999999999999999999999999999      69999999999999999999876531 11         


Q ss_pred             --------------ccc-hhhHHHHHHHHHHHHHHHHHHHHHhccCCCCh-HHHHHHHhHHHHHHHHHHHHHhcCcchhh
Q 025220           71 --------------SFN-MFGFCAALFGCLATSTKTILAESLLHSYKFDS-INTVYYMAPFATMILSIPALLLEGSGIMD  134 (256)
Q Consensus        71 --------------~~~-~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (256)
                                    ..+ ..|+.+.+.++++||.|.++.|+..++  .++ ....+|+..++.....+.....++.+...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~  247 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV  247 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc
Confidence                          112 349999999999999999999998773  444 45566777777666666666555432222


Q ss_pred             hhccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHH
Q 025220          135 WLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCT  214 (256)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~  214 (256)
                      |....  .... ..++..++...+....+++++++.+|.+++++.+++|++++++|++++||++++.+++|+++++.|+.
T Consensus       248 ~~~~~--~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~  324 (358)
T PLN00411        248 WIIHF--DITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY  324 (358)
T ss_pred             ceecc--chHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            21111  1122 23444445444555677789999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhccc
Q 025220          215 FYGYIRHLL  223 (256)
Q Consensus       215 ~~~~~~~~~  223 (256)
                      +.++.++++
T Consensus       325 l~~~~~~~~  333 (358)
T PLN00411        325 AVMWGKANE  333 (358)
T ss_pred             HHHhhhhhh
Confidence            988755544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=9.7e-26  Score=188.68  Aligned_cols=217  Identities=18%  Similarity=0.260  Sum_probs=184.5

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc---------cc
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------SF   72 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---------~~   72 (256)
                      +++-.....+.+.|++|++++.++++.++..+++++++++++|+|+++.++.|++++++|+.++...|.         +.
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~  165 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSN  165 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCc
Confidence            445556777888999999999999999999999999999999999999999999999999988776541         23


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHH
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      ...|+++++.++++||.++++.|+..+  +.+..+.+.+.++++.++..+....+|..++....    .+...+.+++..
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~----w~~~~~~~~v~~  239 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIH----WTSQVIGLLVGY  239 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccC----CChhhHHHHHHH
Confidence            478999999999999999999999998  56889999999999999998888888877655321    123345566666


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhcccc
Q 025220          153 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLS  224 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~  224 (256)
                      +++.+..+...-..++.++|+..++-.....+.+++++++++|+++++..++|.+++++|.++|+..++++.
T Consensus       240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~  311 (334)
T PF06027_consen  240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE  311 (334)
T ss_pred             HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence            666666666677789999999999988889999999999999999999999999999999999987665443

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.94  E-value=1.9e-25  Score=187.88  Aligned_cols=219  Identities=24%  Similarity=0.395  Sum_probs=191.9

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccccc---------
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSF---------   72 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~---------   72 (256)
                      ++++.++..++|.|++|+|.++.+++|++.|+++++++++++|||++++++.++++.++|+++....|.+.         
T Consensus        71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~  150 (303)
T PF08449_consen   71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF  150 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc
Confidence            67889999999999999999999999999999999999999999999999999999999999987755211         


Q ss_pred             -chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhc--Cc-chhhhhccCCCChhHHHH
Q 025220           73 -NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLE--GS-GIMDWLSTHPSPWSAFII  148 (256)
Q Consensus        73 -~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~  148 (256)
                       ...|+++.+.+.++.|...+++||..++++.++.+.++|.+.++.+..++.....+  .. +..++..   ..+..+..
T Consensus       151 ~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~---~~p~~~~~  227 (303)
T PF08449_consen  151 SSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS---AHPSVLLY  227 (303)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH---HhHHHHHH
Confidence             12399999999999999999999999988999999999999999999887777632  21 1112222   22345778


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          149 IFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      ++..+++++..+...+..+++.+|.+.+++.++|.+++++++++++++++++.+|+|.++++.|..+|.+.|+++
T Consensus       228 l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  228 LLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            888888888888888889999999999999999999999999999999999999999999999999999887765

; GO: 0055085 transmembrane transport

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.92  E-value=3.9e-23  Score=170.37  Aligned_cols=203  Identities=16%  Similarity=0.116  Sum_probs=166.8

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc-cccchhhHHHHH
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-LSFNMFGFCAAL   81 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~~~g~~~~l   81 (256)
                      +.+++...+.+.|++++|++++.++.++.|+++++++++++|||++++++.++.+++.|+.++...+ .+.+..|+.+++
T Consensus        55 ~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l  134 (260)
T TIGR00950        55 LQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGL  134 (260)
T ss_pred             HHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHH
Confidence            3467788899999999999999999999999999999999999999999999999999988876443 345568999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHH-HHH
Q 025220           82 FGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF-CLN  160 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  160 (256)
                      .++++++.+.++.||..++.+.++.....+....+.+.+.+.....++...        .+...+..++..++++. ..+
T Consensus       135 ~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  206 (260)
T TIGR00950       135 GSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAY  206 (260)
T ss_pred             HHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987443445556557788888877777665443211        12233445555665554 445


Q ss_pred             HHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHH
Q 025220          161 FSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGC  213 (256)
Q Consensus       161 ~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~  213 (256)
                      ...++.+++.++.+.+.+.+++|+++.+++++++||++++.+++|.++++.|+
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            56677899999999999999999999999999999999999999999999886

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.92  E-value=6.9e-23  Score=171.78  Aligned_cols=205  Identities=13%  Similarity=0.102  Sum_probs=155.7

Q ss_pred             HHHHHHhhhhhcc----ccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccc---------
Q 025220            5 FCINIVLGNVSLR----YIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELS---------   71 (256)
Q Consensus         5 ~~~~~~~~~~al~----~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~---------   71 (256)
                      ++....+.+.+++    +.+++.+.++.++.|+++.+++++++|||++++++.++++++.|+.++..++.+         
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence            4445555555554    568888999999999999999999999999999999999999999888754321         


Q ss_pred             --cchhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHH
Q 025220           72 --FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIII  149 (256)
Q Consensus        72 --~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (256)
                        .+..|+.+.+.++++||.|.++.||..+  +.++.....   ..+...+.+.... ++....      ..+...+..+
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~------~~~~~~~~~l  218 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFL-SPQPAM------VFSLPAIIKL  218 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHH-hcCccc------cCCHHHHHHH
Confidence              2345999999999999999999999865  456665432   2222333332222 221111      1123345455


Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhc
Q 025220          150 FSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH  221 (256)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~  221 (256)
                      +..++.+...+.++++.+++.+|.+.+.+.+++|+++.+++++++||++++.+++|+++++.|+.+....++
T Consensus       219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            556655555667778899999999999999999999999999999999999999999999999988765443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.92  E-value=1.1e-22  Score=171.04  Aligned_cols=213  Identities=13%  Similarity=0.186  Sum_probs=161.5

Q ss_pred             HHHhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc---cccchhhHHHHHHH
Q 025220            8 NIVLGNVSLRY-IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGFCAALFG   83 (256)
Q Consensus         8 ~~~~~~~al~~-~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~~~g~~~~l~a   83 (256)
                      ...+.+.++++ .|++.+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++   .+.++.|+.+++.+
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~a  151 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAA  151 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHH
Confidence            44466678887 689999999999999999999999999999999999999999998876542   22345799999999


Q ss_pred             HHHHHHHHHHHHHHhccC-CCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHH-
Q 025220           84 CLATSTKTILAESLLHSY-KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNF-  161 (256)
Q Consensus        84 ~~~~a~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  161 (256)
                      ++++|.+.++.||..++. ..+......+....+...........++++... ......+...+..++..++++....+ 
T Consensus       152 al~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t~~~~~  230 (299)
T PRK11453        152 AFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVATIVGYG  230 (299)
T ss_pred             HHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999986532 122334445555554444443333444332110 01111233456677777777775544 


Q ss_pred             HHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhc
Q 025220          162 SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH  221 (256)
Q Consensus       162 ~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~  221 (256)
                      .++..+++.++.+.+.+.+++|+++.+++++++||++++.+++|+++++.|+.+..+.++
T Consensus       231 l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        231 IWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            555778999999999999999999999999999999999999999999999998766554

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.91  E-value=1.1e-22  Score=170.72  Aligned_cols=207  Identities=12%  Similarity=0.086  Sum_probs=155.2

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHHH
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALF   82 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l~   82 (256)
                      +..+....+.+++++++|++++.++.++.|+++++++++++|||++++++.++++++.|+.++...+.+.    ..+++.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~  156 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALG  156 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHH
Confidence            4466788999999999999999999999999999999999999999999999999999999875432221    246888


Q ss_pred             HHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Q 025220           83 GCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFS  162 (256)
Q Consensus        83 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (256)
                      ++++||.|.++.||..++...+......+..+.+.....+.   .+.+ ...+   ...+...+..+...++.+...+.+
T Consensus       157 aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~---~~~~~~~~~~~~~~g~~t~i~~~~  229 (296)
T PRK15430        157 LAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSS-TSHM---GQNPMSLNLLLIAAGIVTTVPLLC  229 (296)
T ss_pred             HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCC-cccc---cCCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998754222233333444444443332211   1111 1100   111112233444455556666777


Q ss_pred             HHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhh
Q 025220          163 IFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR  220 (256)
Q Consensus       163 ~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~  220 (256)
                      .+..+++.+|.+.+.+.+++|+++.+++++++||++++.+++|+++++.|+.+.....
T Consensus       230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999998888876543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.89  E-value=1.9e-21  Score=162.89  Aligned_cols=206  Identities=14%  Similarity=0.104  Sum_probs=164.0

Q ss_pred             HHHHHhhhhhc-cccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeec-ccccchhhHHHHHHH
Q 025220            6 CINIVLGNVSL-RYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT-ELSFNMFGFCAALFG   83 (256)
Q Consensus         6 ~~~~~~~~~al-~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~~~~~g~~~~l~a   83 (256)
                      +....+.+.+. ++++++.+.++.++.|+++++++++ +|||++++++.+++++++|+.++..+ +.+.+..|+.+++.+
T Consensus        80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a  158 (292)
T PRK11272         80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIA  158 (292)
T ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHH
Confidence            34566778888 9999999999999999999999986 69999999999999999999877543 334456799999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHH-HHHH
Q 025220           84 CLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC-LNFS  162 (256)
Q Consensus        84 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  162 (256)
                      +++||.+.+..||..+  + ++.....++...+...+.+.....+.+...      ..+...+..+...++++.. ....
T Consensus       159 ~~~~a~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~l~i~~s~~~~~l  229 (292)
T PRK11272        159 SASWAFGSVWSSRLPL--P-VGMMAGAAEMLAAGVVLLIASLLSGERLTA------LPTLSGFLALGYLAVFGSIIAISA  229 (292)
T ss_pred             HHHHHHHHHHHHhcCC--C-cchHHHHHHHHHHHHHHHHHHHHcCCcccc------cCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999754  2 345566788888877777665543322100      0122345556666666553 3446


Q ss_pred             HHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhc
Q 025220          163 IFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH  221 (256)
Q Consensus       163 ~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~  221 (256)
                      .++.+++.++.+.+.+.+++|+++.+++++++||++++.+++|+.+++.|+.+.++.++
T Consensus       230 ~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        230 YMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            66789999999999999999999999999999999999999999999999999876444

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.89  E-value=3.2e-22  Score=162.20  Aligned_cols=225  Identities=22%  Similarity=0.360  Sum_probs=200.3

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL   81 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l   81 (256)
                      +++|.++...+..+++|+++++++++|+.+|+++++....++|+|+++..|.++..+.+|.......|.+.+..|+.|.+
T Consensus        84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~  163 (314)
T KOG1444|consen   84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWAL  163 (314)
T ss_pred             HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999989999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Q 025220           82 FGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNF  161 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (256)
                      ..+++.+.+.++.||-.+..+.+.+.+++|+++.+.+.+.....++++.+-.............+..+.++|++++..++
T Consensus       164 ~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy  243 (314)
T KOG1444|consen  164 ANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISY  243 (314)
T ss_pred             HHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999877899999999999999999988888887654111111122334567789999999999999


Q ss_pred             HHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccccCC
Q 025220          162 SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQ  226 (256)
Q Consensus       162 ~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~~  226 (256)
                      ..+++.+.+|+++.++++......+.+..++.+|++.++...+|..+.+.|.++|++.+.++.+.
T Consensus       244 ~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  244 TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            99999999999999999977777777777778889999999999999999999999988765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.88  E-value=1.5e-21  Score=156.49  Aligned_cols=217  Identities=25%  Similarity=0.397  Sum_probs=193.9

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL   81 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l   81 (256)
                      ++.-++...++|++++|++++.+++.|++.++|+.+++.++.-||+++.-..-+.++-+|+.+.++.+.+++..|..+..
T Consensus        91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~  170 (349)
T KOG1443|consen   91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVL  170 (349)
T ss_pred             hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHH
Confidence            46678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccC---CCChHHHHHHHhHHHHHHHHHHHHHhcCcchh---hhhccCCC--ChhHHHHHHHHH
Q 025220           82 FGCLATSTKTILAESLLHSY---KFDSINTVYYMAPFATMILSIPALLLEGSGIM---DWLSTHPS--PWSAFIIIFSSG  153 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~  153 (256)
                      .++++.+++..+.|+..++.   +.+|+..++...+.....++|..+.+|++...   ......+.  ..+....+.+.|
T Consensus       171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g  250 (349)
T KOG1443|consen  171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGG  250 (349)
T ss_pred             HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHH
Confidence            99999999999999998643   36899999999999999999999999997543   11222222  334456788888


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      ..+++.-.+-|....+++..+.++.+-.+.+.+.+++..+.+++++-..|.|..++..|+..+..
T Consensus       251 ~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  251 LLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            88888888889999999999999999999999999999999999999999999999999999843

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.88  E-value=2.9e-20  Score=155.76  Aligned_cols=202  Identities=11%  Similarity=0.047  Sum_probs=153.9

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc---cccchhhHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGFC   78 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~~~g~~   78 (256)
                      |++++....+.+++++++|++.+.++..+.|+++.+++    +|++++.  .++.+++.|+.++...+   .+.+..|+.
T Consensus        78 g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~l  151 (293)
T PRK10532         78 GVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAA  151 (293)
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHH
Confidence            44567777888899999999999999999999999876    3555544  45667789987765322   223467999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHH
Q 025220           79 AALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC  158 (256)
Q Consensus        79 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (256)
                      +++.++++||.|.+..||..+  +.++... .+....+...+.+.....+...        ......+..++..++++..
T Consensus       152 l~l~aa~~~a~~~v~~r~~~~--~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        152 LALGAGACWAIYILSGQRAGA--EHGPATV-AIGSLIAALIFVPIGALQAGEA--------LWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--cCCchHH-HHHHHHHHHHHHHHHHHccCcc--------cCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999876  4566665 4556666666666555433210        0122234344556666554


Q ss_pred             HH-HHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhh
Q 025220          159 LN-FSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR  220 (256)
Q Consensus       159 ~~-~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~  220 (256)
                      .. ...++.+++.+|.+++++.+++|+++.+++++++||++++.+++|+++++.|+..+.+..
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            44 466788999999999999999999999999999999999999999999999999987543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.87  E-value=2.5e-23  Score=164.05  Aligned_cols=226  Identities=19%  Similarity=0.286  Sum_probs=199.8

Q ss_pred             CchHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc---cccchhhH
Q 025220            1 MSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGF   77 (256)
Q Consensus         1 l~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~~~g~   77 (256)
                      +++++.+++.+.|++++|.+++++++-|++..+|+.+++++++|+|-+.....++.++++|..+-..++   ....+.|.
T Consensus       108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gv  187 (347)
T KOG1442|consen  108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGV  187 (347)
T ss_pred             hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhh
Confidence            467788899999999999999999999999999999999999999999999999999999998877766   55678999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcc-hhhhhccCCCChhHHHHHHHHHHHH
Q 025220           78 CAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSG-IMDWLSTHPSPWSAFIIIFSSGVLA  156 (256)
Q Consensus        78 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  156 (256)
                      ++++.+.++-|+..+++||.....+-.-+.+.+|+++.++++.+|...+....+ +.++  .+.....+|.++.++|+++
T Consensus       188 ifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~--~~l~a~~Fw~~mtLsglfg  265 (347)
T KOG1442|consen  188 IFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF--PHLPAIKFWILMTLSGLFG  265 (347)
T ss_pred             HHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc--ccchHHHHHHHHHHHHHHH
Confidence            999999999999999999988655667788899999999999999887765432 2222  1223467889999999999


Q ss_pred             HHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccccCCCC
Q 025220          157 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQQPP  228 (256)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~~~~  228 (256)
                      +..++...+.+|-+||.++++-.+.+.....++++..++|..+...|-|-.+++.|..+|++.|..+++++.
T Consensus       266 F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~  337 (347)
T KOG1442|consen  266 FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKAS  337 (347)
T ss_pred             HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999999999999999999998876665543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.85  E-value=9.7e-21  Score=157.79  Aligned_cols=204  Identities=11%  Similarity=0.115  Sum_probs=150.4

Q ss_pred             HHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc-ccchhhHHHHHH
Q 025220            4 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-SFNMFGFCAALF   82 (256)
Q Consensus         4 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-~~~~~g~~~~l~   82 (256)
                      .......+.+.++++.|++.+..+.++.|+++.+++++++|||++++++.|+.+++.|+.++..++. +.+..|+.+++.
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~  151 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALA  151 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            3556677888999999999999999999999999999999999999999999999999987764432 234568889999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHH-HHHHHH---hcCcchhhhhccCCCChhHHHHHHHHHHHHHH
Q 025220           83 GCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMIL-SIPALL---LEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC  158 (256)
Q Consensus        83 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (256)
                      ++++++.|.+..|+..+  +.++.....+....+.... .|....   .+....   .   ......+..+...++.+..
T Consensus       152 aal~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       152 AALGTAIYSLSDKAAAL--GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM---F---PYARQILPSATLGGLMIGG  223 (281)
T ss_pred             HHHHHHHhhhhcccccc--chhcccccHHHHHHHHHHHHHHHHHHHHHHhccch---h---hhHHHHHHHHHHHHHHHHH
Confidence            99999999999887643  2333221111111222221 222221   111110   0   0111223334455555555


Q ss_pred             HHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHH
Q 025220          159 LNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTF  215 (256)
Q Consensus       159 ~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~  215 (256)
                      .+...++.+++.++.+.+...+++|+++.+++++++||++++.+++|+++++.|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            566777889999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.82  E-value=5.1e-20  Score=142.59  Aligned_cols=213  Identities=20%  Similarity=0.277  Sum_probs=183.4

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc-------ccch
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-------SFNM   74 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-------~~~~   74 (256)
                      ++-|-+.++.+|.|+||+|-++..+-+++-||-++++++++.|++.+|+++.+++.+++|+++..+.+.       +...
T Consensus        92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g  171 (337)
T KOG1580|consen   92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFG  171 (337)
T ss_pred             HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccc
Confidence            456788999999999999999999999999999999999999999999999999999999998876542       2335


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcC-cchhhhhccCCCChhHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEG-SGIMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      .|-++.+++--..++....++|+.+.+..+.-+++++.++.+.+.+....++... +.+..+...+   +..++-+...+
T Consensus       172 ~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~Rh---P~~~~~l~l~a  248 (337)
T KOG1580|consen  172 FGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRH---PYVFWDLTLLA  248 (337)
T ss_pred             hHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhc---cHHHHHHHHHH
Confidence            7889999999999999999999988778888999999999998877665555432 3333443333   44567777888


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      +.+.+.+...|..+...+|.+-|++.+.+..++++.|+++++.++++.||+|.++++.+...=.
T Consensus       249 i~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  249 IASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            8888888888899999999999999999999999999999999999999999999999887643

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.81  E-value=9.5e-18  Score=140.01  Aligned_cols=205  Identities=19%  Similarity=0.266  Sum_probs=162.6

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHH-HHhccccChhhhhhhhhhhhceeEeeecccccc---hhhHH
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQW-LVWRKYFDWRIWASLVPIVGGILLTSVTELSFN---MFGFC   78 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~-i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~---~~g~~   78 (256)
                      +.......+.+.++++++++.++++.++.|+++.++++ +++|||++++++.++++.+.|+.++..++...+   ..|+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~  157 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLL  157 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHH
Confidence            45667788889999999999999999999999999997 677999999999999999999999987665443   58999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCChHHHHH-HHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHH
Q 025220           79 AALFGCLATSTKTILAESLLHSYKFDSINTVY-YMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  157 (256)
Q Consensus        79 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (256)
                      +++.+++++|.+.+..|+..   +.++..... +...  ..............+       .......+..+...++++.
T Consensus       158 ~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         158 LALAAALLWALYTALVKRLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHH
Confidence            99999999999999999986   345655555 3333  111111111111111       1122334556666666666


Q ss_pred             H-HHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          158 C-LNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       158 ~-~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      . .+...+...++.++...+...+++|+.+.++++++++|+++..+++|..+++.|+.+...+
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            4 5666778899999999999999999999999999999999999999999999999998765

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.81  E-value=8.9e-19  Score=144.27  Aligned_cols=218  Identities=15%  Similarity=0.203  Sum_probs=177.7

Q ss_pred             chHHHHHH----HhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc-------
Q 025220            2 SFVFCINI----VLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-------   70 (256)
Q Consensus         2 ~~~~~~~~----~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-------   70 (256)
                      +++||.-+    ..+|.|+.+++++..+++.++.-+|+..++.++..||+++.+.+++++.++|+++++.+|.       
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            45555544    4566799999999999999999999999999999999999999999999999999988742       


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHHHHHhccC--CCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHH
Q 025220           71 -SFNMFGFCAALFGCLATSTKTILAESLLHSY--KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFI  147 (256)
Q Consensus        71 -~~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (256)
                       +....|+++++++++.||.|.++.||...++  ++|.-....+.+++..+++.|...+.+......+.-+.  ...+..
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~--~~q~~~  319 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPS--STQFSL  319 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCC--CceeEe
Confidence             3347899999999999999999999988654  68888888899999999998877766544333221111  122223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhc
Q 025220          148 IIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH  221 (256)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~  221 (256)
                      .+....+..+...+++-+..-.++|....+-+.+..+.+++.++++-+.++|+.+++|.+.++.|.+..++...
T Consensus       320 vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  320 VVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            33444444445668888888899999999999999999999999999999999999999999999999887543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.81  E-value=5.7e-18  Score=139.52  Aligned_cols=216  Identities=13%  Similarity=0.246  Sum_probs=179.4

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc-----------c
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-----------L   70 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----------~   70 (256)
                      +++|+++..+.+.++.+.+++++++..++-.+.|+++.++++|||.++.||.++++.+.|+.++..+.           .
T Consensus        99 a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~  178 (345)
T KOG2234|consen   99 ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSA  178 (345)
T ss_pred             HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcc
Confidence            46899999999999999999999999999999999999999999999999999999999999876221           2


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchh--hhhccCCCChhHHHH
Q 025220           71 SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIM--DWLSTHPSPWSAFII  148 (256)
Q Consensus        71 ~~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  148 (256)
                      +..+.|....+.+++..++..++.||..++.+.+-+........++.++.+......|+....  +++  .+.+...|+.
T Consensus       179 ~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff--~G~s~~vw~v  256 (345)
T KOG2234|consen  179 QNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFF--YGYSSIVWLV  256 (345)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcc--ccccHHHHHH
Confidence            345789999999999999999999999987676666666666777766666666666655442  222  3344556777


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          149 IFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      ++..++.|...+...    |+.+-..-+....+..+++.+.++.++|.++|.....|..+++.++.+|+..++++
T Consensus       257 Vl~~a~gGLlvs~v~----KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  257 VLLNAVGGLLVSLVM----KYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHhccchhHHHHH----HHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            788887777766554    88888888888888999999999999999999999999999999999999655554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.81  E-value=4.3e-18  Score=137.96  Aligned_cols=203  Identities=21%  Similarity=0.317  Sum_probs=162.9

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc-----------
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL-----------   70 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----------   70 (256)
                      +++|++...+.+.++++++++++++++++..+++++++++++|||+++++|.++++.+.|+.+...++.           
T Consensus        24 A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~  103 (244)
T PF04142_consen   24 ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSV  103 (244)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccccccccc
Confidence            578999999999999999999999999999999999999999999999999999999999998754321           


Q ss_pred             ------ccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChh
Q 025220           71 ------SFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWS  144 (256)
Q Consensus        71 ------~~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (256)
                            .....|..+.+.++++.++..++.||..|+.+.+.+....+....+.+..++.....++.++.+.-...+.+..
T Consensus       104 ~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~  183 (244)
T PF04142_consen  104 HHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWW  183 (244)
T ss_pred             ccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchH
Confidence                  11357999999999999999999999998777677777777777777777666555544332211111222334


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHH
Q 025220          145 AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAI  208 (256)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~l  208 (256)
                      .|..+...++.|.....    ++|+.+...-+....+..+++.+.++.+|+.++|....+|..+
T Consensus       184 ~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  184 VWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            55555555555555443    4599999999999999999999999999999999999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.80  E-value=1.7e-18  Score=137.31  Aligned_cols=215  Identities=17%  Similarity=0.222  Sum_probs=171.0

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc----------cc
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL----------SF   72 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----------~~   72 (256)
                      +|=.....++|.++++++++.+|++|....+|+.+++..+++++++.++|+++.....|++++...|.          +.
T Consensus        94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~  173 (372)
T KOG3912|consen   94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSS  173 (372)
T ss_pred             HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccccc
Confidence            34456678899999999999999999999999999999999999999999999999999998865542          23


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHh----cCcc--------hhhh----h
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLL----EGSG--------IMDW----L  136 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------~~~~----~  136 (256)
                      ...|+.+.+++-+.-|...++.+|..++.+++|.+.+.|..+++.+++.......    .+..        +.+|    -
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~  253 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA  253 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence            4579999999999999999999999998899999999999999976654333322    1101        1111    1


Q ss_pred             ccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHH
Q 025220          137 STHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY  216 (256)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~  216 (256)
                      ...+.+ .....+....+.-.++|+......|..|+++-.++..+|....+++++.+..|.+...|+.|.++.+.|+.+|
T Consensus       254 ~~~e~p-~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY  332 (372)
T KOG3912|consen  254 ALQESP-SLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY  332 (372)
T ss_pred             HhcCCc-hhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            112222 1122222222222355677777789999999999999999999999999999999999999999999999999


Q ss_pred             Hh
Q 025220          217 GY  218 (256)
Q Consensus       217 ~~  218 (256)
                      +-
T Consensus       333 ~~  334 (372)
T KOG3912|consen  333 NQ  334 (372)
T ss_pred             HH
Confidence            84

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.78  E-value=8.2e-18  Score=127.61  Aligned_cols=143  Identities=33%  Similarity=0.586  Sum_probs=127.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc-----CCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCC-----CChhH
Q 025220           76 GFCAALFGCLATSTKTILAESLLHS-----YKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHP-----SPWSA  145 (256)
Q Consensus        76 g~~~~l~a~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  145 (256)
                      |.++++.+.++.|++.++.|+..++     .+.|+.+++.|.++.+++.++|.....|++..........     .....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999999977     6899999999999999999999999998876442222111     13466


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          146 FIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      +..++..|+++++.++..+.+++++||.+.++.+.+|.+..+++|+++++|++++.++.|.++.+.|..+|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7889999999999999999999999999999999999999999999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.78  E-value=5.2e-17  Score=130.38  Aligned_cols=210  Identities=15%  Similarity=0.163  Sum_probs=172.9

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL   81 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l   81 (256)
                      ++..+.+.....+|.+.-.+-++++-+...|++.++++.+++|||+++.|++++.++.+|+........+.+|....+  
T Consensus        79 a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l--  156 (293)
T COG2962          79 ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL--  156 (293)
T ss_pred             HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH--
Confidence            345677788888899988888999999999999999999999999999999999999999999888888888865444  


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Q 025220           82 FGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNF  161 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (256)
                        +++|+.|...-|+.    +.|+.+-.....+.-.+..+....+.+..+.  +...  .+...+.++++.|..+..--.
T Consensus       157 --a~sf~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~--~~~~~~~LLv~aG~vTavpL~  226 (293)
T COG2962         157 --ALSFGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQ--NANSLWLLLVLAGLVTAVPLL  226 (293)
T ss_pred             --HHHHHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhc--CCchHHHHHHHhhHHHHHHHH
Confidence              57899998888876    7799988888888877777777666655432  1111  123346677777777775544


Q ss_pred             HHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          162 SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       162 ~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      +.-...++.+-.+.+++++.+|....+++++++||+++..++++.+.+.+|..+|..+..++
T Consensus       227 lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~  288 (293)
T COG2962         227 LFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYT  288 (293)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44456899999999999999999999999999999999999999999999999999876543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.78  E-value=3.3e-17  Score=131.71  Aligned_cols=218  Identities=17%  Similarity=0.193  Sum_probs=186.0

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc---------cc
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL---------SF   72 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---------~~   72 (256)
                      |....+...+++-|++|++-++..+.+++--+-+++.+.++.|+|++..++++.+++.+|+.+....+.         +.
T Consensus        90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n  169 (327)
T KOG1581|consen   90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN  169 (327)
T ss_pred             HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence            344556778889999999999999999999999999999999999999999999999999998766431         23


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCc-chhhhhccCCCChhHHHHHHH
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGS-GIMDWLSTHPSPWSAFIIIFS  151 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  151 (256)
                      ...|+.+....-.+.++.+..++++.+++++++.+++++.+++.++.-......-+.. +...+...   .+..+.-++.
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~---hp~~~~Di~l  246 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKE---HPDVAFDILL  246 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHc---ChhHHHHHHH
Confidence            5789999999999999999999999999999999999999999888776553222221 11133333   3445777888


Q ss_pred             HHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhcc
Q 025220          152 SGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHL  222 (256)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~  222 (256)
                      .+.++...|...|..+++-++.+...+++.|.+++++++.+.+|++++..||.|..+++.|+.+-...+++
T Consensus       247 ~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  247 YSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            88888888888899999999999999999999999999999999999999999999999999987776665

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.76  E-value=5.8e-18  Score=130.18  Aligned_cols=222  Identities=15%  Similarity=0.250  Sum_probs=194.8

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccccc-------ch
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSF-------NM   74 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~-------~~   74 (256)
                      +.+.......+..++||++++.+++.++++.+.++.....+++.|++-.+..+..+++..-+...++|.+.       -.
T Consensus        75 SfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN  154 (309)
T COG5070          75 SFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN  154 (309)
T ss_pred             HHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC
Confidence            56677788888999999999999999999999999999999999999999999999999988888888643       23


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  154 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
                      .|++|....++..|.+....|+..+-.+......++|.++.+.+++....+.+|++...+....  ........+..+|+
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~ann--l~~d~l~am~ISgl  232 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANN--LSVDSLMAMFISGL  232 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcC--CChHHHHHHHHHHH
Confidence            6999999999999999999999887667788899999999999999999999988765432221  22334567889999


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccccC
Q 025220          155 LAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLLSQ  225 (256)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~~~  225 (256)
                      ++++.+++.-|+++-++.++.++++.++.....+.|.++|||+.+.+.+..+.+-.++..+|...+.++.+
T Consensus       233 ~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         233 CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999987765444

>TIGR00688 rarD rarD protein

Probab=99.75  E-value=1.1e-16  Score=131.62  Aligned_cols=179  Identities=9%  Similarity=0.062  Sum_probs=128.7

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccccchhhHHHHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAAL   81 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~g~~~~l   81 (256)
                      +++.+....+.+++++++++++++++.++.|+++++++++++|||+++++++++++++.|+.++..++.+..    .+++
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l  152 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEAL  152 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHH
Confidence            345677889999999999999999999999999999999999999999999999999999987654322211    4578


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Q 025220           82 FGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNF  161 (256)
Q Consensus        82 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (256)
                      .+++++|.|.+..||..++   +..+...+ .....+...+.....+.+....     ......|..++..++++...+.
T Consensus       153 ~aa~~~a~~~i~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~g~~t~i~~~  223 (256)
T TIGR00688       153 VLAFSFTAYGLIRKALKNT---DLAGFCLE-TLSLMPVAIYYLLQTDFATVQQ-----TNPFPIWLLLVLAGLITGTPLL  223 (256)
T ss_pred             HHHHHHHHHHHHHhhcCCC---CcchHHHH-HHHHHHHHHHHHHHhccCcccc-----cCchhHHHHHHHHHHHHHHHHH
Confidence            8999999999999997542   32222221 2222222222211111111100     0111235555566666666677


Q ss_pred             HHHHHhhccChhHHHHHhhhhHHHHHHHHHhh
Q 025220          162 SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLI  193 (256)
Q Consensus       162 ~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l  193 (256)
                      +....+++.++.+.+.+.+++|+++.++++++
T Consensus       224 l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       224 AFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            78889999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.74  E-value=1.7e-18  Score=136.57  Aligned_cols=208  Identities=14%  Similarity=0.158  Sum_probs=174.6

Q ss_pred             HHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc--------------cc
Q 025220            7 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--------------SF   72 (256)
Q Consensus         7 ~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--------------~~   72 (256)
                      .....+++|++|++.+.+.++..++|.++.+++|+++||++++.+.++....+.|++++.-++.              +.
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~  188 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEY  188 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccc
Confidence            4567789999999999999999999999999999999999999999999999999999864321              23


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHH
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      +..|-..++.+.+.-|-..++.|++.+  +.|....+.|..+++.+..++..........       +....-+++++..
T Consensus       189 ~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l-------P~cgkdr~l~~~l  259 (346)
T KOG4510|consen  189 DIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQL-------PHCGKDRWLFVNL  259 (346)
T ss_pred             cCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccceec-------CccccceEEEEEe
Confidence            457888999999999999999999977  7788888899999888887766554432211       1122336678888


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          153 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      |++++..+.+....+++--|...++..+...+++.++.+++|+|.+++..|+|+++++.+.++....|..+
T Consensus       260 GvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~  330 (346)
T KOG4510|consen  260 GVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG  330 (346)
T ss_pred             hhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence            99999999888888888778888999999999999999999999999999999999999998887666543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.74  E-value=3.5e-16  Score=130.68  Aligned_cols=201  Identities=17%  Similarity=0.233  Sum_probs=155.5

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHH-HHHHHHHHHHHHHhccccChhh----hhhhhhhhhceeEeeecccc------
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKS-FTPATTVVLQWLVWRKYFDWRI----WASLVPIVGGILLTSVTELS------   71 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~-~~pi~~~i~~~i~~~~~~~~~~----~~~~~l~~~Gv~~~~~~~~~------   71 (256)
                      ++.+....+++.+.++++++.+..+.+ +.++++.+.+.+++|||.++++    ..|+++++.|+.+....+.+      
T Consensus        67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~  146 (290)
T TIGR00776        67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKS  146 (290)
T ss_pred             HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccc
Confidence            446666789999999999999999988 8889999999999999999999    99999999999988654321      


Q ss_pred             -cc-hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhH---HHHHHHHHHHHHhcCcchhhhhccCCCChhHH
Q 025220           72 -FN-MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAP---FATMILSIPALLLEGSGIMDWLSTHPSPWSAF  146 (256)
Q Consensus        72 -~~-~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (256)
                       .+ ..|..+++.++++|+.|.+..|+.    +.||....+.+..   .+..+..+..  ....+   +     .+...+
T Consensus       147 ~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~---~-----~~~~~~  212 (290)
T TIGR00776       147 EFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAKP---L-----KKYAIL  212 (290)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--hcccc---h-----HHHHHH
Confidence             23 679999999999999999999976    4688877444443   3333332221  10000   0     111223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh-ccChhHHHHHhhhhHHHHHHHHHhhccCcccchhh----hhHHHHHHHHHHHHh
Q 025220          147 IIIFSSGVLAFCLNFSIFYVIH-STTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNA----VGCAITLIGCTFYGY  218 (256)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~----~G~~li~~g~~~~~~  218 (256)
                       ..+..|++....+...+...+ +.++.+.+++.+.+|+.+.++++++++|+.++.++    +|.++++.|+.+...
T Consensus       213 -~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       213 -LNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             -HHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence             333377775444555556677 89999999999999999999999999999999999    999999999988654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.69  E-value=1.2e-16  Score=126.64  Aligned_cols=214  Identities=17%  Similarity=0.318  Sum_probs=175.3

Q ss_pred             HHHHhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc---cc-----------
Q 025220            7 INIVLGNVSLRY-IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LS-----------   71 (256)
Q Consensus         7 ~~~~~~~~al~~-~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~-----------   71 (256)
                      +.....|+++++ +|.+...++|+..++.++++++++.|+|++.+|+.+++...+|+++.+..+   ..           
T Consensus        76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~  155 (330)
T KOG1583|consen   76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSA  155 (330)
T ss_pred             eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcc
Confidence            344567777775 788889999999999999999999999999999999999999999987532   10           


Q ss_pred             ---cc--hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhh----------
Q 025220           72 ---FN--MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWL----------  136 (256)
Q Consensus        72 ---~~--~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  136 (256)
                         ..  ..|+.+...+.+..|...+++|...++++-|+-+.++|......+..+.    ..++-..+|.          
T Consensus       156 ~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf----~~~div~~~~~~~~se~~~~  231 (330)
T KOG1583|consen  156 QSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLF----MGDDIVSHWRLAFKSESYLI  231 (330)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHH----hcchHHHHHHHHhcCcceec
Confidence               01  2588888899999999999999999999999999999999877666542    2222111111          


Q ss_pred             -ccCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHH
Q 025220          137 -STHPSPWSAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTF  215 (256)
Q Consensus       137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~  215 (256)
                       ......+..|+++++.++..+.+.-..+.+..++++.+.++.-++|..++.++|+..|+.++++..|+|..+++.|..+
T Consensus       232 p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~  311 (330)
T KOG1583|consen  232 PLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL  311 (330)
T ss_pred             cccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence             1111235678899999999998888888888999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcccc
Q 025220          216 YGYIRHLLS  224 (256)
Q Consensus       216 ~~~~~~~~~  224 (256)
                      |....++.+
T Consensus       312 fa~~~~~~~  320 (330)
T KOG1583|consen  312 FANVWNHPK  320 (330)
T ss_pred             HHHHHcCcc
Confidence            987655443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.63  E-value=3.6e-14  Score=111.46  Aligned_cols=203  Identities=16%  Similarity=0.100  Sum_probs=158.1

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc---cccchhhHH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE---LSFNMFGFC   78 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~~~g~~   78 (256)
                      |+..+.+..+.|.+++.+|.+++..+..+.|+...+++    .||.  ++...+.+.+.|+.++.-..   .+.|..|..
T Consensus        78 GvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~  151 (292)
T COG5006          78 GVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVA  151 (292)
T ss_pred             HHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHH
Confidence            45677888899999999999999999999999988764    3333  34555666777776654322   456789999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHH
Q 025220           79 AALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFC  158 (256)
Q Consensus        79 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (256)
                      +++.++.||+.|.+..||..+  ..|..+-+...+.++.++.+|+.....++...        .+.....-+..++++..
T Consensus       152 ~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~--------~p~ll~laLgvavlSSa  221 (292)
T COG5006         152 LALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALF--------SPSLLPLALGVAVLSSA  221 (292)
T ss_pred             HHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcchhhc--------ChHHHHHHHHHHHHhcc
Confidence            999999999999999999976  45777788888888999999888765555432        12233344445555544


Q ss_pred             H-HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhh
Q 025220          159 L-NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR  220 (256)
Q Consensus       159 ~-~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~  220 (256)
                      . +.+-...++|.++.+++++..+||.++.+.|++++||++|+.||.|++.++.+..-.+...
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            3 3344556899999999999999999999999999999999999999999999887655433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.61  E-value=1.4e-15  Score=119.50  Aligned_cols=196  Identities=15%  Similarity=0.244  Sum_probs=161.2

Q ss_pred             hhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc--------ccchhhHHHHHHHH
Q 025220           13 NVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--------SFNMFGFCAALFGC   84 (256)
Q Consensus        13 ~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--------~~~~~g~~~~l~a~   84 (256)
                      ..|.||++....+++.+-..+.+.+++|+++|.|..+.+..|++++++|+..+...|.        +.+..|+.+.++++
T Consensus        96 V~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GA  175 (336)
T KOG2766|consen   96 VKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGA  175 (336)
T ss_pred             eeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecc
Confidence            3588999999999999999999999999999999999999999999999999876652        33468999999999


Q ss_pred             HHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q 025220           85 LATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF  164 (256)
Q Consensus        85 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (256)
                      -+||..++..+.+.+  +.|-.+++...+++|.++..+. +.++..+....   +. . ......+....+-++.+...-
T Consensus       176 TlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl---~w-~-~~i~~yl~f~L~MFllYsl~p  247 (336)
T KOG2766|consen  176 TLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTL---HW-D-SAIFLYLRFALTMFLLYSLAP  247 (336)
T ss_pred             eeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeE---ee-h-HHHHHHHHHHHHHHHHHHhhH
Confidence            999999999999988  7899999999999999998877 56666544311   11 1 112333334455555555666


Q ss_pred             HHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          165 YVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       165 ~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      .++|.++++..++--.....+++++  ..||-+.+|...+..+.+..|..+|..
T Consensus       248 il~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  248 ILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             HheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            7789899998888888889999887  778888999999999999999999944

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=7.9e-15  Score=116.19  Aligned_cols=218  Identities=16%  Similarity=0.208  Sum_probs=183.2

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc----cccchhhH
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE----LSFNMFGF   77 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~g~   77 (256)
                      +.+..+.+.++|-++.|++-++-.+.+++-.+-+++.+.++.++|..+.+..+..+..+|.++.+..|    ++++..|+
T Consensus       113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv  192 (367)
T KOG1582|consen  113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGV  192 (367)
T ss_pred             HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeH
Confidence            45667788899999999999999999999999999999999999999999999999999999887766    45677899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHH
Q 025220           78 CAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  157 (256)
Q Consensus        78 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (256)
                      ++...+-++.|.--.+++|.+++.+-+..++++|...++.+.++.......+. +..|..-.+.+.....+..+-+..++
T Consensus       193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~-f~a~~fcaehp~~tyGy~~~~s~~gy  271 (367)
T KOG1582|consen  193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGEL-FSAWTFCAEHPVRTYGYAFLFSLAGY  271 (367)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccc-hhhhHHHHhCcHhHHHHHHHHHHHhH
Confidence            99999999999999999999987777888999999999998887766655432 22333233334445666666666666


Q ss_pred             HHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhh
Q 025220          158 CLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR  220 (256)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~  220 (256)
                      ..+......++..+|..+..+.+.|...++++|+++|..++|.+..-|..+++.|+++-.+.+
T Consensus       272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            665556666888999999999999999999999999999999999999999999999866544

>TIGR00803 nst UDP-galactose transporter

Probab=99.40  E-value=1.6e-12  Score=104.63  Aligned_cols=189  Identities=16%  Similarity=0.147  Sum_probs=127.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc-------------------c--------c
Q 025220           19 IPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE-------------------L--------S   71 (256)
Q Consensus        19 ~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------------------~--------~   71 (256)
                      ++++.....++..++++++..+...++|++..++++..+...|++.....+                   .        +
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            466778888899999999999988888888888888888888876422111                   1        2


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHH----HHh-cCcchhhhhccCCCChhHH
Q 025220           72 FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPA----LLL-EGSGIMDWLSTHPSPWSAF  146 (256)
Q Consensus        72 ~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~  146 (256)
                      ..+.|....+.+.++.+...++.|+..++.+.+     .|....+..+..+..    ... +......+....+.+...+
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence            335677778888888899999999987643222     333333333322221    111 1111111111122233333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHH
Q 025220          147 IIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY  216 (256)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~  216 (256)
                      ..++..++    .+.+..+.+|+.++.+.+....++++++.+++++++||++++.++.|..+++.|+.+|
T Consensus       157 ~~~~~~a~----~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       157 IVGLLNVG----GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHh----cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            33333333    3334566789999999999999999999999999999999999999999999987765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.32  E-value=2.2e-11  Score=86.02  Aligned_cols=135  Identities=18%  Similarity=0.135  Sum_probs=112.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHH
Q 025220           76 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL  155 (256)
Q Consensus        76 g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (256)
                      ..++++++++++++..+..|--.+  +.||......+++.....+....+...+.+.     ......+.|..++.+|+.
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~-----~~~~~~k~~lflilSGla   76 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQA-----GGEIGPKSWLFLILSGLA   76 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceec-----ccccCcceehhhhHHHHH
Confidence            357899999999999999998777  7899999999999887777766665544332     212345567888899977


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          156 AFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      +...-++.|+.++.-.+.....+.-..+++++++++++++|++|..+++|++++++|.++..
T Consensus        77 ~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          77 GGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            77777788889999999999999999999999999999999999999999999999987654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.30  E-value=3.8e-11  Score=87.44  Aligned_cols=124  Identities=17%  Similarity=0.308  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHH-HHHHHHHH
Q 025220           85 LATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL-AFCLNFSI  163 (256)
Q Consensus        85 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  163 (256)
                      ++||.+.+..|+..+  +.|+....+++...+.+ .++.....+..+...      .....+......+.+ ....+...
T Consensus         1 ~~~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~   71 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKPFKN------LSPRQWLWLLFLGLLGTALAYLLY   71 (126)
T ss_pred             ceeeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhccccccC------CChhhhhhhhHhhccceehHHHHH
Confidence            467889999999988  68999999999999987 666655555443111      112223344455555 35666677


Q ss_pred             HHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          164 FYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       164 ~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      +...++.++...+.+..++|+++.++++++++|++++.+++|.++++.|+.+..
T Consensus        72 ~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   72 FYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.27  E-value=7.6e-11  Score=89.65  Aligned_cols=209  Identities=16%  Similarity=0.192  Sum_probs=152.7

Q ss_pred             HHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeeccc--ccchhhHHHHHH
Q 025220            5 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTEL--SFNMFGFCAALF   82 (256)
Q Consensus         5 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~~~g~~~~l~   82 (256)
                      ..+....+..+++.++++.++.+..+.--|+.+++++.+++|+...+.++..+++.|++++++.|.  ...+.|..+++.
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~  142 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVG  142 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHH
Confidence            344555677899999999999999999999999999999999999999999999999999987664  346899999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHH---HHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHH
Q 025220           83 GCLATSTKTILAESLLHSYKFDSINTVYYMAPFAT---MILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCL  159 (256)
Q Consensus        83 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (256)
                      +++..|+|.+..|+.....+.....  .+.+..++   .+.....+.......++|......+   |..+...+.+....
T Consensus       143 SA~~aAlYKV~FK~~iGnAn~Gdaa--~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~P---WG~l~G~A~L~lAF  217 (290)
T KOG4314|consen  143 SAFMAALYKVLFKMFIGNANFGDAA--HFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAP---WGCLCGAAGLSLAF  217 (290)
T ss_pred             HHHHHHHHHHHHHHHhccCcchhHH--HHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCC---chhhhhHHHHHHHH
Confidence            9999999999999998643333222  22222221   1211111111222222332222222   44455555566666


Q ss_pred             HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          160 NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       160 ~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      ++.....+....|...|+-+.+..+....++.+.-+-..+...+.|-.++.+|..+.-.
T Consensus       218 N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii  276 (290)
T KOG4314|consen  218 NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII  276 (290)
T ss_pred             hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence            76666667788899888888888888888887777767899999999999999988654

>TIGR00688 rarD rarD protein

Probab=99.09  E-value=8e-09  Score=84.98  Aligned_cols=139  Identities=9%  Similarity=0.134  Sum_probs=106.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcc-hhhhhccCCCChhHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSG-IMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      .|..+.+.++++|+...+..|.. .  +.+|.++.+++..++.+++.+......... ........ .....+..+...+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRI-QKRPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCc-ccchHHHHHHHHH
Confidence            37889999999999999999983 4  589999999999999888776654433211 00000000 0111233455666


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      ++......+.++..+++++.+++++.++.|+++.++++++++|+++..++.|.++.++|+.+..
T Consensus        78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            6656666777788999999999999999999999999999999999999999999999988653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.06  E-value=9.4e-09  Score=86.38  Aligned_cols=142  Identities=6%  Similarity=0.007  Sum_probs=107.6

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHH
Q 025220           70 LSFNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIII  149 (256)
Q Consensus        70 ~~~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (256)
                      .+....|..+.+.++++|+...+..|.. .  +.+|.++.+++..++.+++.+......+...  ..... .....+...
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~--~~~~~-~~~~~~~~~   76 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSY--LKTLI-QTPQKIFML   76 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHH--HHHHH-cCHHHHHHH
Confidence            3344679999999999999999999864 3  6899999999999998877766544322111  00000 012222233


Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          150 FSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      ...++.......+.++.++++++..++++.++.|+++.++++++++|+++..++.|.++.+.|+.+..
T Consensus        77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            34444444556677888999999999999999999999999999999999999999999999988764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.94  E-value=5.7e-08  Score=83.42  Aligned_cols=137  Identities=15%  Similarity=0.147  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHH
Q 025220           77 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA  156 (256)
Q Consensus        77 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (256)
                      +...+..-++|+.+.++.|...+. +++|....+++..++.++++++....+.....     .......+..+...|+++
T Consensus        15 ~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~-----~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         15 LTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL-----PPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc-----CcchHHHHHHHHHHHHHH
Confidence            456677889999999999999864 89999999999999999998887665432100     001122345566667666


Q ss_pred             HHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhh------ccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          157 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLI------FRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l------~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      ..++...+..++++++..++++.++.|+++.++++++      ++|+++..+++|.++.+.|+.+....
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            5555567778999999999999999999999999999      69999999999999999999886543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.93  E-value=6.3e-08  Score=80.78  Aligned_cols=133  Identities=13%  Similarity=0.181  Sum_probs=98.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHH
Q 025220           77 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA  156 (256)
Q Consensus        77 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (256)
                      ..+.+.+++++|.+.+..||..++  .++  ...+....+.+.+.|........  ..+..   .....+......++..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~   73 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPD--FLWWALLAHSVLLTPYGLWYLAQ--VGWSR---LPATFWLLLAISAVAN   73 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhH--HHHHHHHHHHHHHHHHHHHhccc--CCCCC---cchhhHHHHHHHHHHH
Confidence            467899999999999999988763  233  34555666666666665542111  01111   1122244555666666


Q ss_pred             HHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          157 FCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      .......+...++.++...+.+.+..|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus        74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            67777778889999999999999999999999999999999999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.92  E-value=7.2e-08  Score=78.47  Aligned_cols=200  Identities=15%  Similarity=0.104  Sum_probs=146.8

Q ss_pred             chHHHHHHHhhhhhccccchhHHH-HHHHHHHHHHHHHHHHHhccccChhhhh----hhhhhhhceeEeeeccccc----
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQ-TIKSFTPATTVVLQWLVWRKYFDWRIWA----SLVPIVGGILLTSVTELSF----   72 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~-ii~~~~pi~~~i~~~i~~~~~~~~~~~~----~~~l~~~Gv~~~~~~~~~~----   72 (256)
                      |++.+......+.++++++++..- +-.....+.+.++++++++|..+..++.    ++++.++|+++.+..|.+.    
T Consensus        52 G~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~  131 (269)
T PF06800_consen   52 GAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSS  131 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccc
Confidence            467778888889999999888654 4446788889999999999988877764    8889999999887755322    


Q ss_pred             ----chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHH
Q 025220           73 ----NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFII  148 (256)
Q Consensus        73 ----~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (256)
                          ...|....+.+.+.|-.|.+..|..    +.|++...+=+++-..+....+.... +....   +      ...+.
T Consensus       132 ~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~---~------k~~~~  197 (269)
T PF06800_consen  132 SKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFF---E------KKSWK  197 (269)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc-ccccc---c------cchHH
Confidence                2458999999999999999998764    67888887766553333333332222 11111   0      01234


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhh----hhHHHHHHHHHH
Q 025220          149 IFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNA----VGCAITLIGCTF  215 (256)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~----~G~~li~~g~~~  215 (256)
                      -+..|++-...+...+...++.+..+.=.+..+..+++.+.++++++|+-+..++    +|.++++.|..+
T Consensus       198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            4566666666777777778888888888889999999999999999999887654    678888777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.66  E-value=2.8e-08  Score=71.24  Aligned_cols=65  Identities=26%  Similarity=0.546  Sum_probs=60.0

Q ss_pred             HHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecccc
Q 025220            6 CINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELS   71 (256)
Q Consensus         6 ~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~   71 (256)
                      ..++.+.++|+++.| +....+.++.|+++++++++++|||++++++.++.+++.|++++..+|.+
T Consensus        46 ~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   46 GVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            378899999999999 58999999999999999999999999999999999999999988876643

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.56  E-value=4.7e-07  Score=75.87  Aligned_cols=64  Identities=17%  Similarity=0.274  Sum_probs=58.0

Q ss_pred             HHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeee
Q 025220            4 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV   67 (256)
Q Consensus         4 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~   67 (256)
                      .+++....+..|+.+.|.+..+=+.....++.++++..++|||++++++.|..+++.|..++..
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            3456667888999999999999999999999999999999999999999999999999887653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.55  E-value=3.2e-06  Score=71.07  Aligned_cols=130  Identities=12%  Similarity=0.123  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  154 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
                      .++.+.+.++++|+...+..|...+  +.+|....+++...+.+++.+..   ..+...      ...   +...+..++
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~------~~~---~~~~~~~~l   69 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTV---GFPRLR------QFP---KRYLLAGGL   69 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHc---cccccc------ccc---HHHHHHHhH
Confidence            4567788999999999999998877  78999999999999888776542   111111      111   111222233


Q ss_pred             HHHHHHHHHHHHh----hccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          155 LAFCLNFSIFYVI----HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       155 ~~~~~~~~~~~~~----~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      ....+..+.+...    +..++...+++.++.|+++.++++++++|++++.+++|.++.++|+.+...
T Consensus        70 ~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         70 LFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheec
Confidence            2222333333322    456788889999999999999999999999999999999999999988653

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.54  E-value=1.9e-06  Score=70.82  Aligned_cols=118  Identities=11%  Similarity=0.029  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 025220           88 STKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVI  167 (256)
Q Consensus        88 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (256)
                      +...+..|...++ ..++....+++...+.+++.+.....  .+          .......+...++.....+...+..+
T Consensus         2 g~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~--~~----------~~~~~~~~~~~~~~~~l~~~~~~~a~   68 (260)
T TIGR00950         2 GTTGVVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR--PP----------LKRLLRLLLLGALQIGVFYVLYFVAV   68 (260)
T ss_pred             cchHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc--cC----------HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455666766543 67999999999998888777654332  10          11112333444444445666777889


Q ss_pred             hccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          168 HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       168 ~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      +++++...+++..+.|+++.+++.++++|++++.+++|..+.++|+.+...
T Consensus        69 ~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        69 KRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             HhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            999999999999999999999999999999999999999999999988753

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.52  E-value=1e-05  Score=67.92  Aligned_cols=129  Identities=13%  Similarity=0.011  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHH
Q 025220           78 CAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  157 (256)
Q Consensus        78 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (256)
                      ...+...+.|+...+..|....  +.+|....+++..++++++++..........         ....+......|.+..
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~---------~~~~~~~~~~~g~~~~   79 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPLP---------TLRQWLNAALIGLLLL   79 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---------cHHHHHHHHHHHHHHH
Confidence            4466788999999999998876  7899999999999999888877654321100         1112333444554443


Q ss_pred             -HHHHHHHHHh-hccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          158 -CLNFSIFYVI-HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       158 -~~~~~~~~~~-~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                       ......+... ++.++...+++.++.|+++.+++.+ ++|+++..++.|..+.++|+.+...
T Consensus        80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence             3334445555 8888889999999999999999985 7999999999999999999988753

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.50  E-value=6.3e-06  Score=67.07  Aligned_cols=140  Identities=11%  Similarity=0.139  Sum_probs=108.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHH
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      +..|+++++.+-+.|+....+.|.+.   +.++.++..++.+.+.+.+.....+.......  .+ ....++.+..+...
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~--~~-~~~~p~~~~~~~l~   78 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWREL--KQ-LLKQPKTLLMLALT   78 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--HH-HHhCcHHHHHHHHH
Confidence            35799999999999999999999774   67999999999999999887776665443221  11 12233445555555


Q ss_pred             HHHHHHHHHHH-HHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          153 GVLAFCLNFSI-FYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       153 ~~~~~~~~~~~-~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      +..-. .|... .|..++-....+|.-.+.+|.+.+++|.++++|+++..|++..++..+|+..-.+.
T Consensus        79 a~li~-~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          79 ALLIG-LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHH-HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            54443 34433 36778888999999999999999999999999999999999999999999876543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.47  E-value=8.4e-06  Score=68.62  Aligned_cols=124  Identities=11%  Similarity=0.101  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHH
Q 025220           78 CAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAF  157 (256)
Q Consensus        78 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (256)
                      .+.+.++++|+...+..|...+  +.+|....+++..++.+.+++...   ...         ..   +..+...+.+..
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~---~~~---------~~---~~~~~~~g~~~~   69 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVA---RPK---------VP---LNLLLGYGLTIS   69 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhc---CCC---------Cc---hHHHHHHHHHHH
Confidence            5678899999999999998876  789999999999987665544321   111         01   111222333332


Q ss_pred             HHH-HHHHHHhhc-cChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          158 CLN-FSIFYVIHS-TTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       158 ~~~-~~~~~~~~~-~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      ..+ ...+...++ .++...+++..+.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        70 ~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         70 FGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence            222 233445565 5778889999999999999999999999999999999999999887653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.46  E-value=1.5e-05  Score=68.61  Aligned_cols=134  Identities=8%  Similarity=-0.066  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCC-hHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHH
Q 025220           77 FCAALFGCLATSTKTILAESLLHSYKFD-SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL  155 (256)
Q Consensus        77 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (256)
                      ..+.+.--.+...+++..|+..+  ..+ |+.+..++..++.+...+.... ......+.    ......+..++..|++
T Consensus        51 ~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~----~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         51 ALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRI----KSLKLFLKNFLPQGLC  123 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCC----CCHHHHHHHHHHHHHH
Confidence            33444444445666788888887  568 9999999999987665443321 11100000    0011234566677777


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          156 AFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      +...+...+..++++++..++++..+.|+++++++.++++|+++..++.|.+++++|+.+..
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            76655556677899999999999999999999999999999999999999999999999765

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.43  E-value=1.3e-05  Score=58.57  Aligned_cols=118  Identities=14%  Similarity=0.110  Sum_probs=77.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  154 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
                      .|+.+.+.+.++.+..+++.|+-.++.  .+...... ..    ... .. ..             .+    ...+..|+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~--g~~~~~~~-~~----~~~-~~-~~-------------~p----~~~i~lgl   55 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRL--PLLSHAWD-FI----AAL-LA-FG-------------LA----LRAVLLGL   55 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhC--CCccchhH-HH----HHH-HH-Hh-------------cc----HHHHHHHH
Confidence            477889999999999999999887632  22211111 00    000 00 00             00    01223333


Q ss_pred             HHHHH-HHHHHHHhhccChhHHHHHhhhhHHHHHHHHHh--hccCcccchhhhhHHHHHHHHHHHHh
Q 025220          155 LAFCL-NFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWL--IFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       155 ~~~~~-~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~--l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      ..+.. ...+...+++.+...+..+....++...+.++.  ++||++|+.+++|.+++++|+++.++
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~  122 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL  122 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            33333 334556789999888888888887777777775  89999999999999999999999865

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.35  E-value=3.6e-05  Score=64.90  Aligned_cols=122  Identities=5%  Similarity=-0.060  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 025220           87 TSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYV  166 (256)
Q Consensus        87 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (256)
                      ...++++.|+..++ -..|..+.+++...+.+...+... .....      ........+..++..|++........+..
T Consensus        14 ~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   85 (302)
T TIGR00817        14 NVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLLSWS-SGLPK------RLKISSALLKLLLPVAIVHTIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHHHHH-hCCCC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445666777762 256888888888877665543311 11110      01112333555666777766666677788


Q ss_pred             hhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHH
Q 025220          167 IHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY  216 (256)
Q Consensus       167 ~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~  216 (256)
                      ++++++..++++..+.|+++.+++.++++|+++..++.|.++++.|+.+.
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999764

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.31  E-value=2.2e-05  Score=56.16  Aligned_cols=73  Identities=22%  Similarity=0.399  Sum_probs=58.6

Q ss_pred             HHHHHHHHHH-HHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhc
Q 025220          148 IIFSSGVLAF-CLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRH  221 (256)
Q Consensus       148 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~  221 (256)
                      .....|.++. ......++..++.++ ....+..+.|+++.+++.++++|++++.++.|.+++++|+.+......
T Consensus        36 ~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   36 WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            3444455444 444555667888885 777999999999999999999999999999999999999999876443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.31  E-value=4.4e-07  Score=65.75  Aligned_cols=61  Identities=23%  Similarity=0.487  Sum_probs=57.6

Q ss_pred             HHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEe
Q 025220            5 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT   65 (256)
Q Consensus         5 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~   65 (256)
                      .+....+.++++++++++..+.+.++.|+++.+++++++||+++++++.|+.+++.|+.++
T Consensus        64 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   64 TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            4778899999999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.28  E-value=1.3e-06  Score=62.25  Aligned_cols=64  Identities=20%  Similarity=0.360  Sum_probs=59.7

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEee
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS   66 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~   66 (256)
                      +++++.+.+...+++.+|++.+..+-++.++++.+++++++|||+++++++|+.+++.|++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4578888999999999999999999999999999999999999999999999999999987654

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.20  E-value=0.00022  Score=60.55  Aligned_cols=215  Identities=10%  Similarity=0.083  Sum_probs=135.1

Q ss_pred             chHHHHHHHhhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhcccc---C----hhhhhhhhhhhhceeEeee----cc
Q 025220            2 SFVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYF---D----WRIWASLVPIVGGILLTSV----TE   69 (256)
Q Consensus         2 ~~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~i~~~i~~~~~~---~----~~~~~~~~l~~~Gv~~~~~----~~   69 (256)
                      |++.+........++++++++...-+ ..+.-+...++..++++|..   +    ..-..+++++++|+++.+.    .|
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            45677788888899999999976544 46788889999999988654   2    3356788899999998876    33


Q ss_pred             c---------ccchhhHHHHHHHHHHHHHHH-------HHHHHHhccCCCChHHHHHHHhH---HHHHHHHHHHHHh---
Q 025220           70 L---------SFNMFGFCAALFGCLATSTKT-------ILAESLLHSYKFDSINTVYYMAP---FATMILSIPALLL---  127 (256)
Q Consensus        70 ~---------~~~~~g~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  127 (256)
                      .         .....|+++++++.+.++.|+       ...+.... .+.++.....-+..   .+..+.-+.....   
T Consensus       160 ~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~  238 (345)
T PRK13499        160 RKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLA  238 (345)
T ss_pred             cccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2         123579999999999999999       54444322 35666655544444   3333322211111   


Q ss_pred             cCcchhhhhccCCCC----hhHHHHHHHHHHHHHHHHHHHHHHhhccChh----HHHHHhhhhHHHHHHHHHhhccCccc
Q 025220          128 EGSGIMDWLSTHPSP----WSAFIIIFSSGVLAFCLNFSIFYVIHSTTAV----TFNVAGNLKVAVAVLVSWLIFRNPIS  199 (256)
Q Consensus       128 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~s~~~~l~~v~~~l~~~~l~~e~~s  199 (256)
                      .+.+..... ....+    .+-...-++.|+.-+..+.......++.+..    ...+-+.+..+++.+.++ +++|.-+
T Consensus       239 k~~~~~~~~-~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~  316 (345)
T PRK13499        239 KNKDLSLKA-DFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKG  316 (345)
T ss_pred             hCCCcccch-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccC
Confidence            111111011 11111    1223334555666555555555544444222    333555778899999998 4899777


Q ss_pred             ------chhhhhHHHHHHHHHHHHhh
Q 025220          200 ------GMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       200 ------~~~~~G~~li~~g~~~~~~~  219 (256)
                            ..-+.|.++++.|..+....
T Consensus       317 a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        317 ASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHhhc
Confidence                  45689999999999887653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.14  E-value=5.1e-05  Score=63.58  Aligned_cols=131  Identities=14%  Similarity=0.117  Sum_probs=95.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHH
Q 025220           76 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL  155 (256)
Q Consensus        76 g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (256)
                      |.++++.++++|+...+..|+..   +.++.+..  ...++..+..........+..        .....+..-+..|+.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~--------~~~~~~~~g~l~G~~   68 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLPEF--------WALSIFLVGLLSGAF   68 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc--------cccHHHHHHHHHHHH
Confidence            57889999999999999999874   45665554  344444444433333222211        113344556666666


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHhh-hhHHHHHHHHHhhccCcccchh----hhhHHHHHHHHHHHHhh
Q 025220          156 AFCLNFSIFYVIHSTTAVTFNVAGN-LKVAVAVLVSWLIFRNPISGMN----AVGCAITLIGCTFYGYI  219 (256)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~s~~~~-l~~v~~~l~~~~l~~e~~s~~~----~~G~~li~~g~~~~~~~  219 (256)
                      -...|...+...++.+....-.+.+ +.++++.+++.++++|+.+..+    ++|.++++.|+.+....
T Consensus        69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            6667788888899988888777767 8888999999999999999999    99999999999887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.13  E-value=0.00013  Score=61.92  Aligned_cols=139  Identities=12%  Similarity=0.205  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCC-hHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFD-SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      .+.+++-.-+++-+...+..+.+.++ +.+ |..-.++......++..+......+.  ..+.......   |+..+..+
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~--~~~~~~~~~~---~w~y~lla   86 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGF--KKWLKVLKRP---WWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhcccc--ccchhhcchh---HHHHHHHH
Confidence            45555555566666666666666543 333 33333333333334444443332222  1222211111   34444457


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      ++-...|+......++++.+...++.....+++.+++++++++++++.+++|.++++.|+.+....
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            888888999999999999999999999999999999999999999999999999999999886554

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.13  E-value=0.00013  Score=61.52  Aligned_cols=127  Identities=13%  Similarity=0.070  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHhccCCCC--hHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHHHHH
Q 025220           87 TSTKTILAESLLHSYKFD--SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIF  164 (256)
Q Consensus        87 ~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (256)
                      +-.+.+.+|++.++...+  +..+.+.+.....+...+.........      ....+   +.-....+++......+.+
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~   82 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK------SRKIP---LKKYAILSFLFFLASVLSN   82 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC------CCcCh---HHHHHHHHHHHHHHHHHHH
Confidence            444668888888655445  778888888877766665544433111      11112   2233444556666666777


Q ss_pred             HHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhcc
Q 025220          165 YVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHL  222 (256)
Q Consensus       165 ~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~  222 (256)
                      ..+++.+..+..+....+++.++++++++++++.+..++.+.+++.+|+.++...+.+
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            8889999999999999999999999999999999999999999999999998875543

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=98.06  E-value=0.00034  Score=51.76  Aligned_cols=131  Identities=13%  Similarity=0.200  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHH
Q 025220           77 FCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLA  156 (256)
Q Consensus        77 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (256)
                      ..+++.+..+-+.+..+.-++.++.+ ||+...+.....+.+.+.......++.+...   ..+.+   | +....|+++
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~---~~~~p---~-w~~lGG~lG   74 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSLAS---LSSVP---W-WAYLGGLLG   74 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhcccccch---hccCC---h-HHhccHHHH
Confidence            56788888999999999988887432 5999999999999988887777766553222   22223   2 233488888


Q ss_pred             HHHHHHHHHHhhccChhHHHHHhhh-hHHHHHHHHHh-h---ccCcccchhhhhHHHHHHHHHH
Q 025220          157 FCLNFSIFYVIHSTTAVTFNVAGNL-KVAVAVLVSWL-I---FRNPISGMNAVGCAITLIGCTF  215 (256)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~s~~~~l-~~v~~~l~~~~-l---~~e~~s~~~~~G~~li~~g~~~  215 (256)
                      ..+-.......++.++.....+... +-+.+.+++.+ +   -.+++++.+++|.++++.|+.+
T Consensus        75 ~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   75 VFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            8887777788899988877776666 67777888875 2   3478899999999999999863

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.01  E-value=4.7e-06  Score=59.34  Aligned_cols=65  Identities=20%  Similarity=0.210  Sum_probs=60.3

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeee
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV   67 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~   67 (256)
                      +.-+++..+++.|++--+++...=+..+.|.++++++++++|||++..+|+|+.+++.|+++++.
T Consensus        75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            45577889999999999999999999999999999999999999999999999999999998753

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.96  E-value=6e-05  Score=62.21  Aligned_cols=66  Identities=9%  Similarity=0.137  Sum_probs=58.5

Q ss_pred             HHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc
Q 025220            4 VFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE   69 (256)
Q Consensus         4 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~   69 (256)
                      .+.+.-...+-|..+-|.+..+-+.++..+..++++..++|||+++...+|..++++|..+++...
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            345556677888999999999999999999999999999999999999999999999988877644

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.95  E-value=0.00011  Score=52.21  Aligned_cols=56  Identities=16%  Similarity=0.192  Sum_probs=49.5

Q ss_pred             HHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          162 SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       162 ~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      .....+++.+...+-....+.++.+.++|++++||++++.+++|.++++.|+.+..
T Consensus        53 ~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         53 LWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            34456788888888888889999999999999999999999999999999998764

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.90  E-value=0.00087  Score=55.59  Aligned_cols=140  Identities=16%  Similarity=0.119  Sum_probs=96.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHH
Q 025220           74 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        74 ~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      ..+....+..++.++......|+.... ..+......++.........+.... +....   ..... .  .+...+..+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~-~--~~~~~~~~~   77 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLL-EPRGL---RPALR-P--WLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHh-hcccc---ccccc-c--hHHHHHHHH
Confidence            356677788889999999999988763 3556666665666665552222211 11000   00110 1  233444444


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHH-hhccCcccchhhhhHHHHHHHHHHHHhhhc
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSW-LIFRNPISGMNAVGCAITLIGCTFYGYIRH  221 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~-~l~~e~~s~~~~~G~~li~~g~~~~~~~~~  221 (256)
                      +.........+..++++++.....+....|++..+++. ++++|+++..++.|..+.+.|+.+......
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence            44445556667779999999999999999999999996 777999999999999999999999765433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.82  E-value=0.00013  Score=59.41  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhcc
Q 025220          146 FIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHL  222 (256)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~  222 (256)
                      .+.....+++-...|.+.+..+++.+|.+..++...+.+++.++++++++++++..||++..+.+.|+.+.+.....
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            45667777777788888999999999999999999999999999999999999999999999999999998765443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.72  E-value=6.6e-05  Score=54.82  Aligned_cols=66  Identities=18%  Similarity=0.254  Sum_probs=59.5

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHH--HhccccChhhhhhhhhhhhceeEeeec
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWL--VWRKYFDWRIWASLVPIVGGILLTSVT   68 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i--~~~~~~~~~~~~~~~l~~~Gv~~~~~~   68 (256)
                      .++++.+.+++.+++..|++.+.-+.+..+.++.+.++.  +++|+++..+++|+.++++|+.++...
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            467889999999999999999999999999888888885  899999999999999999999887643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.69  E-value=0.0021  Score=53.92  Aligned_cols=125  Identities=14%  Similarity=0.051  Sum_probs=88.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHH
Q 025220           74 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        74 ~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      ..|..+.+.++++++......|...+  +.+|..+.+++..++++++++...... ...         ....+......|
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~-~~~---------~~~~~~~~~~~g   78 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWR-LRF---------AKEQRLPLLFYG   78 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHh-ccC---------CHHHHHHHHHHH
Confidence            56889999999999999999998887  689999999999999888775532111 100         111122333444


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHH
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFY  216 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~  216 (256)
                      ++....+...++.+++.++...+++....|+++.+++.    |++.  +..+..+.++|+.+.
T Consensus        79 ~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li  135 (293)
T PRK10532         79 VSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFL  135 (293)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHhee
Confidence            44445556667778999999999999999999988762    4433  345556666776654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.66  E-value=0.00021  Score=58.11  Aligned_cols=132  Identities=14%  Similarity=0.156  Sum_probs=86.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHH
Q 025220           76 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL  155 (256)
Q Consensus        76 g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (256)
                      |++.++.|+++++...+=.||.-.   -|++-..+++.....+......+..+.+.+.             ...++.|.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~-------------p~amlgG~l   64 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILGFPPFY-------------PWAMLGGAL   64 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcCCCcce-------------eHHHhhhhh
Confidence            567889999999999999997743   4777777777766655555555544443322             233445555


Q ss_pred             HHHHHHHHHHHhhccC-hhHHHHHhhhhHHHHHHHHHh-hccCcc-----cchhhhhHHHHHHHHHHHHhhhccc
Q 025220          156 AFCLNFSIFYVIHSTT-AVTFNVAGNLKVAVAVLVSWL-IFRNPI-----SGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       156 ~~~~~~~~~~~~~~~~-~~~~s~~~~l~~v~~~l~~~~-l~~e~~-----s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      -...|.+..-.++..+ +.-..+.+...-+.+...+-+ +|+++.     .....+|.+++++|..+|..-|...
T Consensus        65 W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   65 WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            5555555555555543 334445555666777777755 565432     5578899999999999998765544

The region concerned is approximately 280 residues long.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.64  E-value=0.00073  Score=48.52  Aligned_cols=54  Identities=17%  Similarity=0.258  Sum_probs=44.2

Q ss_pred             HhhccC-hhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          166 VIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       166 ~~~~~~-~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      .+++.+ ...+++...+..+.+.+.++++|+|++|+.+++|+.++++|+...+..
T Consensus        50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         50 AVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            345553 335666667788999999999999999999999999999999987543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.60  E-value=5.2e-06  Score=65.79  Aligned_cols=202  Identities=14%  Similarity=0.114  Sum_probs=139.2

Q ss_pred             hHHHHHHHhhhhhccccchhHHHH-HHHHHHHHHHHHHHHHhccccChhhh----hhhhhhhhceeEeeecccc------
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQT-IKSFTPATTVVLQWLVWRKYFDWRIW----ASLVPIVGGILLTSVTELS------   71 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~i-i~~~~pi~~~i~~~i~~~~~~~~~~~----~~~~l~~~Gv~~~~~~~~~------   71 (256)
                      ++-+.....++.|+++++++.+.= -..+..+-+.+++++.++|..+..+.    .++.+.+.|+.+-++.|.+      
T Consensus        67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~  146 (288)
T COG4975          67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEEN  146 (288)
T ss_pred             hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccC
Confidence            344555667788999998887643 34567778889999999999887765    6788999999998887631      


Q ss_pred             --cchhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHH
Q 025220           72 --FNMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIII  149 (256)
Q Consensus        72 --~~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (256)
                        ..-.|....+.+.+.|-.|.+..+..    +.|.+....-+..-.....+......+.....          ...+.-
T Consensus       147 ~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~~~~----------K~t~~n  212 (288)
T COG4975         147 PSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEKRFN----------KYTWLN  212 (288)
T ss_pred             hHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccccchH----------HHHHHH
Confidence              12358888888999999999988876    45666555554443222223233322212111          123455


Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhh----hhHHHHHHHHHHHHh
Q 025220          150 FSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNA----VGCAITLIGCTFYGY  218 (256)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~----~G~~li~~g~~~~~~  218 (256)
                      +..|+.-...|..++...++.+..+.=.++-+-.+++.+=++++++|+-|..++    +|.++++.|..+...
T Consensus       213 ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         213 IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            667777777777777777776665555566677788889999999999999876    677777777766543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.52  E-value=0.0053  Score=43.30  Aligned_cols=52  Identities=15%  Similarity=0.444  Sum_probs=44.0

Q ss_pred             HhhccC-hhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          166 VIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       166 ~~~~~~-~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      .+|+.+ ...+++...+..+.+.+.++++|+|++++.+++|+.+++.|+...+
T Consensus        55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            345554 3467788888889999999999999999999999999999998764

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.52  E-value=0.00019  Score=51.52  Aligned_cols=65  Identities=12%  Similarity=0.224  Sum_probs=59.2

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHH-HHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeee
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV   67 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~   67 (256)
                      ++++.++.+...+++++|++.+..+- ...-+.++++++++++|+++..+++++.++++|++.+-.
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            56888999999999999999998885 689999999999999999999999999999999987643

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.47  E-value=0.012  Score=43.68  Aligned_cols=138  Identities=13%  Similarity=0.114  Sum_probs=93.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHH
Q 025220           74 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        74 ~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      +...+.++.+..+...+.-..-++.+..+ +|....+.....+...+.......++.+...  .....+    ++..+.|
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a--~~~~~p----wW~~~GG   76 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA--AVASAP----WWAWIGG   76 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--hccCCc----hHHHHcc
Confidence            35577888899999999999888877433 6888888888888888777766655433222  122223    2344556


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhh-hHHHHHHHHHhhcc----CcccchhhhhHHHHHHHHHHHHh
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNL-KVAVAVLVSWLIFR----NPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l-~~v~~~l~~~~l~~----e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      +++..+-........+.++.....+-.. +-+.+.+++.+=+.    .+++..++.|.+++++|+.+.+.
T Consensus        77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            7777666666666777776655444433 66666776655443    58899999999999999666544

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.37  E-value=0.0026  Score=45.01  Aligned_cols=53  Identities=11%  Similarity=0.291  Sum_probs=44.2

Q ss_pred             HhhccCh-hHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          166 VIHSTTA-VTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       166 ~~~~~~~-~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      .+++.+. ..+++...+..+.+.++++++|+|++++.+++|+.+++.|+...+.
T Consensus        50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3566543 3566667778889999999999999999999999999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.34  E-value=0.0004  Score=49.18  Aligned_cols=65  Identities=20%  Similarity=0.395  Sum_probs=57.9

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHH-HHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeee
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIK-SFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV   67 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~   67 (256)
                      +++++++.+...+++.+|++.+.-+- ...-+.+.++++++++|++++.++.++.++++|++.+-.
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            46788888889999999999998885 478889999999999999999999999999999987643

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.31  E-value=0.0031  Score=44.19  Aligned_cols=53  Identities=11%  Similarity=0.139  Sum_probs=45.4

Q ss_pred             HhhccC-hhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          166 VIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       166 ~~~~~~-~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      .+|+.+ ...+++..-+..+.+.+.++++|+|++++.+++|+.+++.|+...+.
T Consensus        49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            345553 45678888889999999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.25  E-value=0.0031  Score=43.89  Aligned_cols=54  Identities=19%  Similarity=0.290  Sum_probs=46.1

Q ss_pred             HhhccC-hhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          166 VIHSTT-AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       166 ~~~~~~-~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      .+|+.+ .+.+++..-.-.+.+.+.++++|+|++++.+++|..++++|+...+..
T Consensus        50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            346654 346788888899999999999999999999999999999999987653

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.25  E-value=0.00072  Score=47.41  Aligned_cols=63  Identities=14%  Similarity=0.138  Sum_probs=56.4

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHH-HHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEe
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKS-FTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT   65 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~-~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~   65 (256)
                      ++++.++.+...+++.+|++.+-.+-. ...+.+.+.+++++||++++.++.++.+.+.|++.+
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            467888888999999999998776665 788999999999999999999999999999998765

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.18  E-value=0.00089  Score=47.22  Aligned_cols=63  Identities=16%  Similarity=0.337  Sum_probs=55.2

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHH-HHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEe
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKS-FTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT   65 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~-~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~   65 (256)
                      +.++.++.+...+++.+|++.+-.+-. ...+.+.+.+++++||++++.++.++.+++.|++.+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            467778888889999999998776654 778889999999999999999999999999998753

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.11  E-value=0.01  Score=50.63  Aligned_cols=141  Identities=16%  Similarity=0.117  Sum_probs=89.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHH--HHHHHHH-HhcCcchhhhhccCCCChhHHHHHH
Q 025220           74 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATM--ILSIPAL-LLEGSGIMDWLSTHPSPWSAFIIIF  150 (256)
Q Consensus        74 ~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  150 (256)
                      ..|+++.+++++|++.+.+-.||. +   .-+++.. |. ..+..  ++.|... ....+++.+....  .+...+..-.
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~~-k---~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~--~~~~~~~~~~   77 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKKV-K---KWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSS--FSGSTLLPVF   77 (345)
T ss_pred             HHHHHHHHHHHHHhhccccccccc-C---CCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHh--cCHHHHHHHH
Confidence            579999999999999999999983 3   2444544 33 22221  1122111 1111333322222  2344566677


Q ss_pred             HHHHHHHHHHHHHHHHhhccChhH-HHHHhhhhHHHHHHHHHhhccCcc-------cchhhhhHHHHHHHHHHHHhhhcc
Q 025220          151 SSGVLAFCLNFSIFYVIHSTTAVT-FNVAGNLKVAVAVLVSWLIFRNPI-------SGMNAVGCAITLIGCTFYGYIRHL  222 (256)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~l~~v~~~l~~~~l~~e~~-------s~~~~~G~~li~~g~~~~~~~~~~  222 (256)
                      ++|++-...|...+...++.+... ..+..-+.-+.+.+++.+++||=.       ....++|.+++++|+.+..+.-.+
T Consensus        78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~  157 (345)
T PRK13499         78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQL  157 (345)
T ss_pred             HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            777777777777777777776543 344445678889999999998632       234678999999999998875433

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.08  E-value=0.047  Score=46.17  Aligned_cols=139  Identities=13%  Similarity=0.114  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcc--CCCChHHHHHHHhHHHHHHHHHHHHHhcCc---chhh-hhccCCCChhHHHHHHHH
Q 025220           79 AALFGCLATSTKTILAESLLHS--YKFDSINTVYYMAPFATMILSIPALLLEGS---GIMD-WLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        79 ~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~  152 (256)
                      ..+...+-.+......|+..+.  .+..|.+.++..-+.-.++.....+..++.   .... ........+.-..-+...
T Consensus        19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vP   98 (345)
T KOG2234|consen   19 SLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVP   98 (345)
T ss_pred             HHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHH
Confidence            3344445555555556655432  357788888777776666555444443311   1110 000001111123344555


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          153 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      +++-...|-..|....+.+|.++.+...++...+.++++++++++++..||...++...|+...+
T Consensus        99 a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen   99 ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            55555666677788999999999999999999999999999999999999999999999999987

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.00  E-value=0.0018  Score=48.60  Aligned_cols=64  Identities=9%  Similarity=0.077  Sum_probs=58.6

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEee
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTS   66 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~   66 (256)
                      ++........+..++++++-+.+++.....+.+.++++++++|+++..++.|+.+++.|.++..
T Consensus        89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            4555677888899999999999999999999999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.96  E-value=0.0019  Score=45.00  Aligned_cols=63  Identities=16%  Similarity=0.243  Sum_probs=55.5

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEe
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT   65 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~   65 (256)
                      ++++.++.+-..+++.+|++.+-.+ .....+.+++.++++++|+.+..+++++.+.+.|++.+
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            4678888889999999999987655 45788899999999999999999999999999998754

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.90  E-value=0.003  Score=43.36  Aligned_cols=56  Identities=9%  Similarity=0.247  Sum_probs=35.0

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccChhhhhhhhhh
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPI   58 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~   58 (256)
                      .+++.++.+...+++.+|.+.+--+ .....+.+.+.+..+++|+++..++.++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3688899999999999999998555 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.67  E-value=0.00095  Score=53.91  Aligned_cols=136  Identities=13%  Similarity=0.184  Sum_probs=89.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHH
Q 025220           75 FGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  154 (256)
Q Consensus        75 ~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
                      .|..+.-.+ ..+-...+..++..   ..||...-....+.......|.......+-   +-+   ...+  -.+++=|+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v---~gp---~g~R--~~LiLRg~  105 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPV---IGP---EGKR--KWLILRGF  105 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeee---ecC---CCcE--EEEEeehh
Confidence            566666666 66666667777665   347777766664443333333322222111   000   0111  12334455


Q ss_pred             HHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhcc
Q 025220          155 LAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHL  222 (256)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~  222 (256)
                      .++..-+..|+..++.+-..+.++....|+++.++++.+++|+.|.....|..+.+.|+++..+..-.
T Consensus       106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFl  173 (346)
T KOG4510|consen  106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFL  173 (346)
T ss_pred             hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcc
Confidence            55555556677778888888889999999999999999999999999999999999999998765443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.38  E-value=0.033  Score=45.78  Aligned_cols=80  Identities=16%  Similarity=0.213  Sum_probs=60.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHh-hhhHHHHHHHHHhhccCcccchhh----hhHHHHHHHHHHHHh
Q 025220          144 SAFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAG-NLKVAVAVLVSWLIFRNPISGMNA----VGCAITLIGCTFYGY  218 (256)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~l~~v~~~l~~~~l~~e~~s~~~~----~G~~li~~g~~~~~~  218 (256)
                      ..++.-.++|++-...+...+...++.+..++..+. .++-+.+.++++++|||--+..++    .+.+++++|+.+.++
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            346667788888888888888888887777666655 447788999999999997766554    477888899988776


Q ss_pred             hhccc
Q 025220          219 IRHLL  223 (256)
Q Consensus       219 ~~~~~  223 (256)
                      .++++
T Consensus       123 ~~~~~  127 (269)
T PF06800_consen  123 QDKKS  127 (269)
T ss_pred             ccccc
Confidence            54433

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.31  E-value=0.039  Score=46.43  Aligned_cols=117  Identities=16%  Similarity=0.168  Sum_probs=77.2

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHH
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      ...|..+++.++++.+...+++||-..+.+.++..--  ..        +...+              ..+ .|+.-...
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~~--------~~~~l--------------~~~-~W~~G~~~   59 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--SG--------GRSYL--------------RRP-LWWIGLLL   59 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--ch--------hhHHH--------------hhH-HHHHHHHH
Confidence            3579999999999999999999987643211111000  00        00000              001 12222222


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          153 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      ...+...+   +......++...+.++.+.-++..+++..+++|+++...++|..+++.|..+.-
T Consensus        60 ~~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   60 MVLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HhcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            22333333   334566677788888889999999999999999999999999999999988764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.61  E-value=0.065  Score=36.71  Aligned_cols=45  Identities=16%  Similarity=0.220  Sum_probs=25.3

Q ss_pred             HHhhccChh-HHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHH
Q 025220          165 YVIHSTTAV-TFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAIT  209 (256)
Q Consensus       165 ~~~~~~~~~-~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li  209 (256)
                      ..+|+.+.. .+.+...+..+...+.|+++|+|++|+.+++|+.++
T Consensus        48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            345666443 456777788899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.51  E-value=0.031  Score=39.56  Aligned_cols=61  Identities=23%  Similarity=0.287  Sum_probs=52.1

Q ss_pred             HHHHHHhhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEe
Q 025220            5 FCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLT   65 (256)
Q Consensus         5 ~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~   65 (256)
                      +-.....+++.+...|.+.+.-+ +++.=++|++.++++.+|..+++.+.|+.+++.|+.+.
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            44455667778888888887766 58999999999999999999999999999999999875

Many members are annotated as potential transmembrane proteins.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.33  E-value=0.026  Score=47.97  Aligned_cols=79  Identities=6%  Similarity=-0.009  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          145 AFIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      ..-.-+..|.+-+..++.....+++++.....++.....+++..++..+.+|++|..+.++..+.+.|+++.++.+.++
T Consensus       158 ~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  158 TAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            3445667778888889988889999999999999999999999999999999999999999999999999988766544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.30  E-value=0.029  Score=45.22  Aligned_cols=58  Identities=16%  Similarity=0.291  Sum_probs=51.6

Q ss_pred             HHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeE
Q 025220            7 INIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL   64 (256)
Q Consensus         7 ~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~   64 (256)
                      +-+.+...++..+|..++.++-++.|.+.++.++++++|++|..||.++..++.+.+-
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            3445666899999999999999999999999999999999999999999888877653

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.07  E-value=0.099  Score=41.76  Aligned_cols=129  Identities=11%  Similarity=0.128  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHhcc-CCCC---------hHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHH
Q 025220           85 LATSTKTILAESLLHS-YKFD---------SINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGV  154 (256)
Q Consensus        85 ~~~a~~~v~~~~~~~~-~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (256)
                      +||=.|.+.++|+.++ ++.+         ...+++++...-.+..=....+.+....+        ..+.+.+  ..+-
T Consensus        23 vCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D--------~t~~~~Y--aAcs   92 (337)
T KOG1580|consen   23 VCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEID--------NTPTKMY--AACS   92 (337)
T ss_pred             heehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccccccc--------CCcchHH--HHHH
Confidence            5788888999998863 2221         23344554444443332222222212221        1112222  2233


Q ss_pred             HHHHHHH-HHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          155 LAFCLNF-SIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       155 ~~~~~~~-~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      .+++..+ .....++..+=-+.-+-...+|+-..++|+++.+...++.......+++.|+.++.+..++.
T Consensus        93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv  162 (337)
T KOG1580|consen   93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV  162 (337)
T ss_pred             HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence            3333332 33455666665566677788999999999999999999999999999999999998764443

>TIGR00803 nst UDP-galactose transporter

Probab=94.26  E-value=0.056  Score=43.34  Aligned_cols=60  Identities=5%  Similarity=-0.017  Sum_probs=53.4

Q ss_pred             HHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeE
Q 025220            5 FCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILL   64 (256)
Q Consensus         5 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~   64 (256)
                      .+....+..+.+++.+..+..+...+.++++.++++++++++++..++.|..+.+.|+.+
T Consensus       162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344445667889999999999999999999999999999999999999999999999865

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.44  E-value=3.2  Score=34.74  Aligned_cols=134  Identities=12%  Similarity=0.056  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcc------CCC-ChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHH
Q 025220           81 LFGCLATSTKTILAESLLHS------YKF-DSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSG  153 (256)
Q Consensus        81 l~a~~~~a~~~v~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (256)
                      ..--..+-.+.+++||+..+      ++. ++.-+.+.+.+.+.+.....  .......    .....+   |+.....+
T Consensus        20 ~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~--l~~~k~~----~~~~ap---l~~y~~is   90 (327)
T KOG1581|consen   20 SGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAM--LKWWKKE----LSGVAP---LYKYSLIS   90 (327)
T ss_pred             HHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHH--Hhccccc----CCCCCc---hhHHhHHH
Confidence            33344566778888888742      122 45556667777665555322  2222111    111122   34444555


Q ss_pred             HHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhhccc
Q 025220          154 VLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIRHLL  223 (256)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~~~~  223 (256)
                      +.......+.+-.+|+.|=-+..+....+.+..++++.++++.+.++...+-..++-.|+..+...++.+
T Consensus        91 ~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   91 FTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            5555555666777899998889999999999999999999999999999999999999999988765543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.43  E-value=0.043  Score=44.07  Aligned_cols=130  Identities=14%  Similarity=0.156  Sum_probs=81.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHH
Q 025220           76 GFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVL  155 (256)
Q Consensus        76 g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (256)
                      .+++++.-++.|+.......|...    +|.+-..-..+ ++++.....+++..|..         ....+..-..+|++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG----~p~qQ~lGtT~-GALifaiiv~~~~~p~~---------T~~~~iv~~isG~~   68 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG----KPYQQTLGTTL-GALIFAIIVFLFVSPEL---------TLTIFIVGFISGAF   68 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC----ChhHhhhhccH-HHHHHHHHHheeecCcc---------chhhHHHHHHhhhH
Confidence            456778888888888777776632    44443333333 34444433333332221         22234556667777


Q ss_pred             HHHHHHHHHHHhhccChhHHHHHhh-hhHHHHHHHHHhhccCcccchhh----hhHHHHHHHHHHHHhh
Q 025220          156 AFCLNFSIFYVIHSTTAVTFNVAGN-LKVAVAVLVSWLIFRNPISGMNA----VGCAITLIGCTFYGYI  219 (256)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~s~~~~-l~~v~~~l~~~~l~~e~~s~~~~----~G~~li~~g~~~~~~~  219 (256)
                      -...+...+...+..+..++..+.+ .+-+-+.+++++.|||=-++.++    +..++++.|+.+..+.
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~  137 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQ  137 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeee
Confidence            7777777888777777666655544 47788999999999997777654    4556667777776543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.06  E-value=3.9  Score=34.83  Aligned_cols=145  Identities=15%  Similarity=0.152  Sum_probs=78.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHH-HhcCcchhhhhccCCCChhHHHHHHHH
Q 025220           74 MFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPAL-LLEGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        74 ~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      ..|+++-.+++++.+.+.+=.||..    .=+++..+...-+-.-+..|... ...-|+..+.....+..  .++...+.
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~--~l~~~~l~   79 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPAS--TLFWTFLF   79 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChh--HHHHHHHH
Confidence            5799999999999999999999873    24445444333333334444333 33455555444444333  23333333


Q ss_pred             HHHHHHHHHHHHHHhhccC-hhHHHHHhhhhHHHHHHHHHhhc-------cCcccchhhhhHHHHHHHHHHHHhhhcccc
Q 025220          153 GVLAFCLNFSIFYVIHSTT-AVTFNVAGNLKVAVAVLVSWLIF-------RNPISGMNAVGCAITLIGCTFYGYIRHLLS  224 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~-~~~~s~~~~l~~v~~~l~~~~l~-------~e~~s~~~~~G~~li~~g~~~~~~~~~~~~  224 (256)
                      |++--..+...=..+++.+ +...++..-+-.+++.++.-++.       +++-....++|.+++++|+.+..+.-..|+
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            3332222221112234433 22344444444445555433332       233345788999999999999987654433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.02  E-value=0.31  Score=34.58  Aligned_cols=52  Identities=25%  Similarity=0.392  Sum_probs=40.2

Q ss_pred             HHHhhccChhHHH-HHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHH
Q 025220          164 FYVIHSTTAVTFN-VAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTF  215 (256)
Q Consensus       164 ~~~~~~~~~~~~s-~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~  215 (256)
                      ++.+++.+-..+. +.+.+.-+++.+.++++..|..+...++|+++++.|+.+
T Consensus        59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3445665544333 446788899999999998888899999999999999764

Many members are annotated as potential transmembrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=92.63  E-value=0.062  Score=41.71  Aligned_cols=63  Identities=10%  Similarity=0.227  Sum_probs=55.8

Q ss_pred             HHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhh
Q 025220          158 CLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR  220 (256)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~  220 (256)
                      ..++.....+++.+|+.++.+...+..+..+++++++++++...+++..++.+.|+++..+..
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence            456666677899999999999999999999999999999999999999999999988876543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=90.54  E-value=1.6  Score=36.05  Aligned_cols=70  Identities=14%  Similarity=0.228  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          149 IFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      ++..+++-......++..+..+++....++.-...+++-+++..+++.++++.||.|+..+.+|.+....
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            3346666666667777788889999999998889999999999999999999999999999999987653

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=87.45  E-value=0.63  Score=39.40  Aligned_cols=123  Identities=15%  Similarity=0.084  Sum_probs=74.2

Q ss_pred             HHHHHHHHHhccC-CCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHh
Q 025220           89 TKTILAESLLHSY-KFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSSGVLAFCLNFSIFYVI  167 (256)
Q Consensus        89 ~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (256)
                      ..+++.|+..+++ -.-|..+...+...+....+....+...+... .     .....+.-++-.+++...........+
T Consensus        31 ~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~-~-----~~~~~~~~llpl~~~~~~~~v~~n~Sl  104 (316)
T KOG1441|consen   31 GVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSK-I-----SSKLPLRTLLPLGLVFCISHVLGNVSL  104 (316)
T ss_pred             eeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCc-c-----ccccchHHHHHHHHHHHHHHHhcchhh
Confidence            3445566666532 23455555554444433333333222222111 0     011224445555555555556666778


Q ss_pred             hccChhHHHHHhhhhHHHHHHHHHhhccCcccc----------------------hhhhhHHHHHHHHHHHH
Q 025220          168 HSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISG----------------------MNAVGCAITLIGCTFYG  217 (256)
Q Consensus       168 ~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~----------------------~~~~G~~li~~g~~~~~  217 (256)
                      ++.+...+..+..++|++++++++++.+|+.+.                      ..+.|....+++.....
T Consensus       105 ~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~a  176 (316)
T KOG1441|consen  105 SYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFA  176 (316)
T ss_pred             hccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998766                      35566666666665544

>PRK02237 hypothetical protein; Provisional

Probab=84.40  E-value=8.7  Score=26.88  Aligned_cols=48  Identities=23%  Similarity=0.349  Sum_probs=41.1

Q ss_pred             hhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          172 AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       172 ~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      ...++-.+-.-.+.++++++.+-+++++...++|..++++|+.+....
T Consensus        59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            345667777788999999999999999999999999999999876543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=84.10  E-value=0.35  Score=40.54  Aligned_cols=118  Identities=17%  Similarity=0.252  Sum_probs=78.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHhcCcchhhhhccCCCChhHHHHHHHH
Q 025220           73 NMFGFCAALFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLLEGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        73 ~~~g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      +..|.++++.+++..+...++.||-.++.+.                    .-..++.+.....  .   .+.|+.-.+.
T Consensus        19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~--------------------~~~ra~~gg~~yl--~---~~~Ww~G~lt   73 (335)
T KOG2922|consen   19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGA--------------------SGLRAGEGGYGYL--K---EPLWWAGMLT   73 (335)
T ss_pred             ceeeeeehhhccEEEeeehhhhHHHHHHHhh--------------------hcccccCCCcchh--h---hHHHHHHHHH
Confidence            4578999999999999999999887652110                    0011111111111  1   1234554445


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          153 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      -..|-..|+..   ....++.-...++.+..+.+.+++..+++|+++....+|++++++|....-.
T Consensus        74 m~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   74 MIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            55555555544   3445666677778888899999999999999999999999999999776543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=82.82  E-value=28  Score=29.43  Aligned_cols=133  Identities=17%  Similarity=0.158  Sum_probs=82.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccCCCChHH-HHHHHhHHHHHHHHHHHHHh--cCcchhhhhccCCCChhHHHHHHHH
Q 025220           76 GFCAALFGCLATSTKTILAESLLHSYKFDSIN-TVYYMAPFATMILSIPALLL--EGSGIMDWLSTHPSPWSAFIIIFSS  152 (256)
Q Consensus        76 g~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
                      ....++.-+++.-+..+..|.....++.+..- ++.+|++.+.+.....-..-  +.++.+ +     ...+-|+   -.
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~-~-----~~~kk~~---P~   83 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLD-L-----RTAKKWF---PV   83 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcC-h-----HHHHHHc---cH
Confidence            34555666666667777777777665554433 34588888777665443321  111111 1     0111111   11


Q ss_pred             HHHHHHHHHHHHHHhhccChhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHH
Q 025220          153 GVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~  217 (256)
                      .++-++..+..-..+++.+.....++..+.++.+.+-...+++..++...+.....+++|...+.
T Consensus        84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~  148 (314)
T KOG1444|consen   84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA  148 (314)
T ss_pred             HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence            11111122222344688888889999999999999999999999999999999999999887764

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=82.69  E-value=1.2  Score=30.92  Aligned_cols=40  Identities=15%  Similarity=0.181  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc
Q 025220           30 FTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE   69 (256)
Q Consensus        30 ~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~   69 (256)
                      ...+.+.+..+.+-++||++.++++..++++|+.++...+
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            4566777888889999999999999999999998876543

; GO: 0016020 membrane

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=82.15  E-value=7.8  Score=27.03  Aligned_cols=48  Identities=19%  Similarity=0.366  Sum_probs=41.1

Q ss_pred             hhHHHHHhhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          172 AVTFNVAGNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       172 ~~~~s~~~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      .-.++...-.-.+.++++++.+-+++++...++|..+++.|+.+..+.
T Consensus        57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            335667777788999999999999999999999999999999886553

; GO: 0016020 membrane

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=81.92  E-value=2.6  Score=29.14  Aligned_cols=40  Identities=15%  Similarity=0.173  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc
Q 025220           30 FTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE   69 (256)
Q Consensus        30 ~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~   69 (256)
                      ...+.+.+..+..-+++|++.++.+..+++.|+.++..++
T Consensus        67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p  106 (109)
T COG1742          67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP  106 (109)
T ss_pred             hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence            3556677788888899999999999999999998887654

>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine

Probab=81.76  E-value=1.5  Score=36.59  Aligned_cols=132  Identities=13%  Similarity=0.178  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhHHHHHHHHHHHHHh-c--------CcchhhhhccCCCChhHHHHHHH
Q 025220           81 LFGCLATSTKTILAESLLHSYKFDSINTVYYMAPFATMILSIPALLL-E--------GSGIMDWLSTHPSPWSAFIIIFS  151 (256)
Q Consensus        81 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~  151 (256)
                      +++.+|++.+...+|..-++-+.  .+..+|-..++.++......+. .        ++++.  .+..+.++..+...+.
T Consensus         2 ~itmlcwGSW~nt~kL~~r~gR~--~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl--~qL~Q~n~~sv~~A~a   77 (336)
T PF07168_consen    2 VITMLCWGSWPNTQKLAERRGRL--PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFL--TQLSQANWPSVLFAMA   77 (336)
T ss_pred             eeehhhhcChHHHHHHHHhcCCc--cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHH--HHHhcCChHHHHHHHH
Confidence            34667788888777776553222  2334555555555443333232 1        12222  2223344444544555


Q ss_pred             HHHHHHHHHHHHHHHhhccChh-HHHHHhhhhHHHHHHHHHhhccCccc--chhhhhHHHHHHHHHHHH
Q 025220          152 SGVLAFCLNFSIFYVIHSTTAV-TFNVAGNLKVAVAVLVSWLIFRNPIS--GMNAVGCAITLIGCTFYG  217 (256)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~l~~v~~~l~~~~l~~e~~s--~~~~~G~~li~~g~~~~~  217 (256)
                      .|++--..|++..+.+...+-. +.-+-..+.-++++.+.+++ +.+.+  ..-..|.+++++++++-.
T Consensus        78 GGvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga  145 (336)
T PF07168_consen   78 GGVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA  145 (336)
T ss_pred             hhHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence            5555555555554443332211 01111111223333333333 34444  245567777777776643

Transport is dependent on glucose and a proton gradient [].

>PRK02237 hypothetical protein; Provisional

Probab=81.10  E-value=1.5  Score=30.64  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeecc
Q 025220           30 FTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTE   69 (256)
Q Consensus        30 ~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~   69 (256)
                      ...+.+.+..+..-++||++.++++..++++|+.++...+
T Consensus        68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            3456666888889999999999999999999998775543

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=80.83  E-value=4.6  Score=29.66  Aligned_cols=35  Identities=11%  Similarity=0.092  Sum_probs=19.3

Q ss_pred             HHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHh
Q 025220          183 VAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGY  218 (256)
Q Consensus       183 ~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~  218 (256)
                      -.+-+++|.+.+++ --...++|..+...|++....
T Consensus        71 Glfyif~G~l~~~~-~~~~~i~g~~~~~~G~~~i~l  105 (136)
T PF08507_consen   71 GLFYIFLGTLCLGQ-SILSIIIGLLLFLVGVIYIIL  105 (136)
T ss_pred             HHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHH
Confidence            34555556666555 223445666666777665443

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	256
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.78
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.33
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.27
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.26

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.78  E-value=1.2e-08  Score=74.18  Aligned_cols=61  Identities=10%  Similarity=0.168  Sum_probs=42.7

Q ss_pred             HHHHHHHhhccChhHHHHH-hhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhhh
Q 025220          160 NFSIFYVIHSTTAVTFNVA-GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYIR  220 (256)
Q Consensus       160 ~~~~~~~~~~~~~~~~s~~-~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~~  220 (256)
                      .++....+++.++..+..+ ..+.|+++.++++++++|++++.+++|++++++|+++.+..+
T Consensus        44 ~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           44 FWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3455567899999977777 899999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.33  E-value=4.6e-07  Score=63.48  Aligned_cols=66  Identities=20%  Similarity=0.406  Sum_probs=60.7

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeeec
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVT   68 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~   68 (256)
                      +++++.+.+...++++.|.+.+..+ ..+.|+++++++++++||++++.++.++.+++.|++++...
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            4678888999999999999999888 89999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.27  E-value=4.6e-07  Score=65.82  Aligned_cols=65  Identities=20%  Similarity=0.419  Sum_probs=49.6

Q ss_pred             hHHHHHHHhhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccChhhhhhhhhhhhceeEeee
Q 025220            3 FVFCINIVLGNVSLRYIPVSFMQTI-KSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSV   67 (256)
Q Consensus         3 ~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~i~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~   67 (256)
                      +++++.+.+.+.+++.+|++.+..+ .++.|++++++++++++|++++.+++|+.++++|++++..
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4688899999999999999999888 8999999999999999999999999999999999987754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.26  E-value=6.2e-06  Score=57.66  Aligned_cols=58  Identities=10%  Similarity=0.175  Sum_probs=50.7

Q ss_pred             HHHHHhhccChhHHHHH-hhhhHHHHHHHHHhhccCcccchhhhhHHHHHHHHHHHHhh
Q 025220          162 SIFYVIHSTTAVTFNVA-GNLKVAVAVLVSWLIFRNPISGMNAVGCAITLIGCTFYGYI  219 (256)
Q Consensus       162 ~~~~~~~~~~~~~~s~~-~~l~~v~~~l~~~~l~~e~~s~~~~~G~~li~~g~~~~~~~  219 (256)
                      +....+|+.+...+..+ ..+.|+.+.++++++++|++++.+++|..+++.|+...+..
T Consensus        46 ~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           46 LLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44456788888877666 79999999999999999999999999999999999998653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00