Citrus Sinensis ID: 025229

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
Protein Sequence
MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKFNYLII
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccccccHEEcccccccccccccccccccEcccccccccccccHHcccEEEcccEEEEcccccccccccccccccEEEccEEEEEccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mrsltlpwsglkahslpssasypkaskscgsklfpfnslcknqtstskklslrnpylnfsrelcrdpgascenrndvdcknckmtRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFasglqsfpflgdlgdiSRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRtfhyvdeilpfrfgqtdlpiddIAAVCLLVYFGVSTLldaastdglksedeqkevkFNYLII
Flexible Loop (DISEMBL)
mrsltlpwsglkahslpssasypKASKSCGSKLFPFNSLCKnqtstskklslrnpYLNFSrelcrdpgascenrndvdcknCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAstdglksedeqkevkfnylii
Low Complexity Region (SEG)
MRSLTLPWSGLKAHslpssasypkasksCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIaallaarnsaaTVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKFNYLII
Disordered region (IsUnstruct)
******************************************************PYLNFSRELCRD****C*NRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA**********************
Disordered Region (DISOPRED)
*****************************************************************************************************VMFFGLLTLQGSQTA*********************ISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD****************KFNYLII
Disordered Region (DISEMBL)
MRSLTLPWSGLKAHS*************CGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKFNYLII
Disordered Region (DISPRO)
*****LPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKF**LII
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKFNYLII
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	256	2.2.26 [Sep-21-2011]
Q94AX5	370	GDT1-like protein 1, chlo	yes	no	0.824	0.570	0.545	2e-55
B8AAM2	341	GDT1-like protein 1, chlo	N/A	no	0.503	0.378	0.719	2e-46
Q5NAY7	341	GDT1-like protein 1, chlo	no	no	0.503	0.378	0.712	2e-46
Q9T0H9	359	GDT1-like protein 2, chlo	no	no	0.347	0.247	0.510	9e-18
Q2R2Z4	347	GDT1-like protein 2, chlo	no	no	0.347	0.256	0.531	9e-18
P52876	206	GDT1-like protein sll0615	N/A	no	0.378	0.470	0.401	4e-11
Q10320	287	GDT1-like protein C17G8.0	yes	no	0.406	0.362	0.370	7e-09
Q9HC07	324	Transmembrane protein 165	yes	no	0.410	0.324	0.341	1e-07
Q9SX28	228	GDT1-like protein 5 OS=Ar	no	no	0.304	0.342	0.379	3e-07
Q9C6M1	230	GDT1-like protein 4 OS=Ar	no	no	0.304	0.339	0.367	1e-06

>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=At1g64150 PE=2 SV=2

 Score =  215 bits (548), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/231 (54%), Positives = 147/231 (63%), Gaps = 20/231 (8%)

Query: 40  CKNQTSTSKKLSLRNPYLN-----FSRELCRDPGASCENRNDVDC-----------KNCK 83
           C +        S+RN Y +       R   +  G  C  RND  C           +N  
Sbjct: 38  CVSAYPIPIGFSVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLD 97

Query: 84  MTRES--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISR 140
           +  ES   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS 
Sbjct: 98  VLVESSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISS 157

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVD
Sbjct: 158 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVD 217

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKF 251
           E+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKE + 
Sbjct: 218 EVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAEL 267

Arabidopsis thaliana (taxid: 3702)

>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_00941 PE=3 SV=2

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/132 (71%), Positives = 108/132 (81%), Gaps = 3/132 (2%)

Query: 107 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 166
           +L LQGSQ A+A  +F  G+Q    +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96  VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152

Query: 167 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 226
           ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD  A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212

Query: 227 GVSTLLDAASTD 238
           GV+TLLDAAS D
Sbjct: 213 GVTTLLDAASGD 224

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0221700 PE=3 SV=2

 Score =  185 bits (470), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/132 (71%), Positives = 108/132 (81%), Gaps = 3/132 (2%)

Query: 107 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 166
           +L LQGSQ A+A  +F  G+Q    +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96  VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152

Query: 167 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 226
           ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD  A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212

Query: 227 GVSTLLDAASTD 238
           G++TLLDAAS D
Sbjct: 213 GITTLLDAASGD 224

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2

 Score = 90.9 bits (224), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 66/94 (70%), Gaps = 5/94 (5%)

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GF +AF LIF SE+GDKTFFIAALLA +     V  G+ GAL+ MT++SV++G+ F  V 
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA 234
              P +F QT LPI + AA+ LL++FG+ ++ DA
Sbjct: 204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDA 233

Arabidopsis thaliana (taxid: 3702)

>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 5/94 (5%)

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GF +AF LIF SE+GDKTFFIAALLA +   A V  G+  AL+ MT++SVI+GR F  V 
Sbjct: 134 GFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSV- 192

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA 234
              P +F QT LPI + AA+ LL +FG  ++ DA
Sbjct: 193 ---PAQF-QTTLPIGEYAAIALLAFFGFKSIKDA 222

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 15/112 (13%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 201
           F +  LLI  SELGDKTFFIA +LA R     V  G  G LAAMT++SV++G+ F +   
Sbjct: 5   FTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTF--- 61

Query: 202 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA----ASTDGLKSEDEQKEV 249
            LP R+        + A V L + FG   L DA    A+ +  + ED +K +
Sbjct: 62  -LPTRY-------INYAEVALFLIFGTKLLWDARRIKATANLEEMEDAEKAI 105

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1

 Score = 61.2 bits (147), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 12/116 (10%)

Query: 137 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 196
           D  R    +  +IF  E+GDKTF +AALLA  NS  TVFAG++ AL  MT++ V+LG   
Sbjct: 45  DFLRSLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLG--- 101

Query: 197 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKS--EDEQKEVK 250
           H    + P +       + DI    L V FG+  L++A      K    DE + V+
Sbjct: 102 HAAPLLFPRK-------LTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVR 150

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 12/117 (10%)

Query: 134 DLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG 193
           +LG I   F +A  +I  SELGDKTFFIAA++A R +  TV AG   AL  MT +SV+ G
Sbjct: 90  NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 148

Query: 194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
               Y   ++P  +           +  L   FG+  L +       + ++E +EV+
Sbjct: 149 ----YATTVIPRVY-------TYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQ 194

Homo sapiens (taxid: 9606)

>sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 135 LGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG- 193
           +G + +GF  +  + F SE+GDKTFF AA+LA R     V AG   AL  MT++S  LG 
Sbjct: 1   MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query: 194 --------RTFHYVDEILPFRFGQTDL 212
                   +  H++   L F FG   L
Sbjct: 61  AAPNLISRKWTHHITTFLFFGFGLWSL 87

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 135 LGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG- 193
           +  + +GF  +  + F SE+GDKTFF AA+LA R     V AG   AL  MT++S  LG 
Sbjct: 1   MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query: 194 --------RTFHYVDEILPFRFGQTDL 212
                   +  H++  +L F FG   L
Sbjct: 61  AAPNLISRKWTHHITTLLFFGFGLWSL 87

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
255537647	375	Transmembrane protein TPARL, putative [R	0.921	0.629	0.551	2e-71
297742269	393	unnamed protein product [Vitis vinifera]	0.917	0.597	0.545	1e-66
449452426	342	PREDICTED: GDT1-like protein 1, chloropl	0.847	0.634	0.558	1e-63
449533248	234	PREDICTED: GDT1-like protein 1, chloropl	0.828	0.905	0.570	6e-63
225426088	260	PREDICTED: GDT1-like protein 1, chloropl	0.562	0.553	0.819	4e-59
359806660	347	uncharacterized protein LOC100809618 [Gl	0.753	0.556	0.594	4e-56
357481519	403	Transmembrane protein [Medicago truncatu	0.847	0.538	0.569	4e-56
297836959	368	predicted protein [Arabidopsis lyrata su	0.769	0.535	0.606	2e-55
356540420	321	PREDICTED: LOW QUALITY PROTEIN: GDT1-lik	0.761	0.607	0.559	9e-54
18407980	370	uncharacterized protein [Arabidopsis tha	0.824	0.570	0.545	1e-53

>gi|255537647|ref|XP_002509890.1| Transmembrane protein TPARL, putative [Ricinus communis] gi|223549789|gb|EEF51277.1| Transmembrane protein TPARL, putative [Ricinus communis]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/294 (55%), Positives = 186/294 (63%), Gaps = 58/294 (19%)

Query: 1   MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFS 60
           MRS+TL  S L+    P   S           L P NS  K ++S   KLS RNP L FS
Sbjct: 1   MRSITLSESALRLPPCPKPVS-----------LLPLNSFSKKRSS---KLSFRNPCLTFS 46

Query: 61  R---ELCRD----------PGASCENRNDV-----DCKNCKMTRES-------------- 88
           R   + C            P  S +N N +     DC+N + +RES              
Sbjct: 47  RYSRQWCEYSIQEAFRHFLPMVS-KNFNGLEVRGLDCQNFQASRESMPVLDDICFLDKLS 105

Query: 89  --VHNLANDS---------GLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGD 137
             V ++  D          GL+KF++  G LT QGSQ A A  D A G QS P+LGDLGD
Sbjct: 106 TKVKSIKEDEVAASTTSYGGLLKFMLLVGYLTFQGSQQAFAGTDIAVGSQSIPYLGDLGD 165

Query: 138 ISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFH 197
           IS GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGALA MT+ISV+LGRTFH
Sbjct: 166 ISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAVMTIISVVLGRTFH 225

Query: 198 YVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKF 251
           YVDEILPFR G+TDLP+DDIAAVCLLVYFGVSTL+DA+S DGLK+EDEQKE + 
Sbjct: 226 YVDEILPFRLGETDLPVDDIAAVCLLVYFGVSTLIDASSGDGLKAEDEQKEAEL 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742269|emb|CBI34418.3| unnamed protein product [Vitis vinifera]

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/284 (54%), Positives = 179/284 (63%), Gaps = 49/284 (17%)

Query: 1   MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFS 60
           MR++TL  S L+ HSL S    PK  K   S LF  NS  K   S   KLS + P L FS
Sbjct: 1   MRTITLSESVLRTHSLHSPC--PKPPKFFSSYLFSLNSRVKEHNS---KLSHQYPRLVFS 55

Query: 61  RELCRDPGASC------------ENRNDVD---CKNCKMTRESVHNL------------- 92
           R   R    +C            EN + ++   C N K +++ +HN+             
Sbjct: 56  RFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKI 115

Query: 93  ----------------ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLG 136
                            +  GL+KF++ FG LTLQ SQ AVA  DFASGLQ   +LGDLG
Sbjct: 116 NYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLG 175

Query: 137 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 196
           DIS GF SAFLLIFFSELGDKTFFIAALLAARNS A VF GTFGALA MT+ISV+LGRTF
Sbjct: 176 DISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTF 235

Query: 197 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGL 240
           HYVDEILPFRFG+TDLPIDDIAAVCLLVYFGVSTLL+A S++GL
Sbjct: 236 HYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGL 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452426|ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial [Cucumis sativus]

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/240 (55%), Positives = 165/240 (68%), Gaps = 23/240 (9%)

Query: 34  FPFNSLCKNQTSTS---KKLSLRNPYLNFSRELCRDPGASCE--NRNDVDCKNCKMTRES 88
           + F+S C+  T+     +K  + + Y +  +E C    +S E   R+     NC+   + 
Sbjct: 1   YRFSSCCRTATTKPWYWRKTEVVSKYYD-HQEPCHHDYSSREVSTRSITILDNCRAPEKP 59

Query: 89  VHNLANDSGL-----------------IKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPF 131
           +   ++  G+                 +KF++  G   LQ SQ A+A  D A+GLQS P 
Sbjct: 60  LAKYSSAEGIHENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPL 119

Query: 132 LGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVI 191
           LGDLGDIS GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL AMT+ISV+
Sbjct: 120 LGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVV 179

Query: 192 LGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKF 251
           LGRTFHYVDEILPFR G +DLP+DDIAAVCLLVYFGV+TLLDA+S+DGLK+EDEQKE + 
Sbjct: 180 LGRTFHYVDEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAEL 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533248|ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial [Cucumis sativus]

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 134/235 (57%), Positives = 163/235 (69%), Gaps = 23/235 (9%)

Query: 36  FNSLCKNQTSTS---KKLSLRNPYLNFSRELCRDPGASCE--NRNDVDCKNCKMTRESVH 90
           F+S C+  T+     +K  + + Y +  +E C    +S E   R+     NC+   + + 
Sbjct: 1   FSSCCRTATTKPWYWRKTEVVSKYYD-HQEPCHHDYSSREVSTRSITILDNCRAPEKPLA 59

Query: 91  NLANDSGL-----------------IKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLG 133
             ++  G+                 +KF++  G   LQ SQ A+A  D A+GLQS P LG
Sbjct: 60  KYSSAEGIHENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLG 119

Query: 134 DLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILG 193
           DLGDIS GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL AMT+ISV+LG
Sbjct: 120 DLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLG 179

Query: 194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKE 248
           RTFHYVDEILPFR G +DLP+DDIAAVCLLVYFGV+TLLDA+S+DGLK+EDEQKE
Sbjct: 180 RTFHYVDEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKE 234

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426088|ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplastic [Vitis vinifera]

 Score =  234 bits (596), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 118/144 (81%), Positives = 128/144 (88%)

Query: 97  GLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGD 156
           GL+KF++ FG LTLQ SQ AVA  DFASGLQ   +LGDLGDIS GF SAFLLIFFSELGD
Sbjct: 3   GLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGD 62

Query: 157 KTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDD 216
           KTFFIAALLAARNS A VF GTFGALA MT+ISV+LGRTFHYVDEILPFRFG+TDLPIDD
Sbjct: 63  KTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDD 122

Query: 217 IAAVCLLVYFGVSTLLDAASTDGL 240
           IAAVCLLVYFGVSTLL+A S++GL
Sbjct: 123 IAAVCLLVYFGVSTLLEANSSNGL 146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806660|ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycine max] gi|255636411|gb|ACU18544.1| unknown [Glycine max]

 Score =  224 bits (570), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/212 (59%), Positives = 151/212 (71%), Gaps = 19/212 (8%)

Query: 52  LRNPYLNFSRELCRDPGASCENRND-----VDCKNCK--MTR---ESVHNLANDSG--LI 99
           L++     S+   + P    +N N+         NCK  + R    S H  + +S   L+
Sbjct: 38  LQSSTFALSQNETKFPTQPYKNSNNSSQSLAHISNCKFPLARPLVSSSHPASTNSSTKLL 97

Query: 100 KFVMFFGLLTLQGSQTAVAAV-DFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKT 158
             ++ F  LTLQ S  A+AA  DF++        GD+GD+S GFASAFLLIFFSELGDKT
Sbjct: 98  NSMLLFAFLTLQPSYPALAASSDFST------IFGDIGDLSTGFASAFLLIFFSELGDKT 151

Query: 159 FFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIA 218
           FFIAALLAARNSA  VF GTFGALAAMT+ISV+LGRTFHYVDEILPFRFG+TDLPIDDIA
Sbjct: 152 FFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFGETDLPIDDIA 211

Query: 219 AVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
           AVCLLVYFGVSTLLDA+S+DG KS++EQKE +
Sbjct: 212 AVCLLVYFGVSTLLDASSSDGQKSDEEQKEAE 243

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481519|ref|XP_003611045.1| Transmembrane protein [Medicago truncatula] gi|355512380|gb|AES94003.1| Transmembrane protein [Medicago truncatula]

 Score =  224 bits (570), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/239 (56%), Positives = 165/239 (69%), Gaps = 22/239 (9%)

Query: 15  SLPSSASYPKASKSCGSKL---FPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASC 71
           SL SS+ +P  +  C  KL   F F ++ ++ T              F R    D  +  
Sbjct: 82  SLISSSIFPPPTPRCNLKLPPRFQFTNIFRSTT-------------GFVRASEDD--SVA 126

Query: 72  ENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPF 131
           EN +      C++  ++V +      ++KF++F     LQ +  AVAA DFA+GL S P 
Sbjct: 127 ENSD----SQCQLATQNVSSDDASMTVLKFMLFSAFFALQDAFPAVAASDFATGLNSIPI 182

Query: 132 LGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVI 191
            GD+GD+S GFASAFLLIFFSELGDKTFFIAALLAARNSA+ VF GTFGALAAMTVISV 
Sbjct: 183 FGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVA 242

Query: 192 LGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
           LGRTFHYVDE+LPFRFG+TDLPIDDIAAVCLLVYFGVSTLLDA+S+D  KS+DEQKE +
Sbjct: 243 LGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAE 301

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836959|ref|XP_002886361.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332202|gb|EFH62620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/221 (60%), Positives = 153/221 (69%), Gaps = 24/221 (10%)

Query: 51  SLRNPYLNFSR---ELCRDPGAS----CENRNDVDCKNCKM-TRESVHNL--ANDSG--- 97
           S RN Y  FSR   +L R+        C  RND  C   K  + E++ NL    DS    
Sbjct: 47  SFRNQY--FSRCLTQLRRNESQQLEFRCFRRNDSACYLEKAESEENIRNLDLLVDSSVAH 104

Query: 98  -------LIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLI 149
                  L+KF+   G + L G+  A AA   A+G QS    LGDLGDIS GFASAFLLI
Sbjct: 105 SRRETLRLLKFLAVSGSVALLGNDPAFAASSIANGTQSLVSSLGDLGDISSGFASAFLLI 164

Query: 150 FFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQ 209
           FFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHY DE+LPFRFG+
Sbjct: 165 FFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYADEVLPFRFGE 224

Query: 210 TDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
           TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKE +
Sbjct: 225 TDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAE 264

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540420|ref|XP_003538687.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 1, chloroplastic-like, partial [Glycine max]

 Score =  216 bits (549), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/220 (55%), Positives = 147/220 (66%), Gaps = 25/220 (11%)

Query: 51  SLRNPYLNFSRELCRDPGASCENRND-----VDCKNCKMTRE-------------SVHNL 92
           +LR      SR   + P  +  N N+         N K +               ++ NL
Sbjct: 5   TLRTSTFATSRNETKFPTQAYRNSNNSPGSLAHISNWKFSLPPPPPPPLVSSSAPAITNL 64

Query: 93  ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFS 152
           +    L+ F++ FG LTLQ S  A+A+    S +      GD+GD+S GFASAFLLIFFS
Sbjct: 65  STK--LLNFMLLFGFLTLQDSYPALASSSDISTI-----FGDIGDLSTGFASAFLLIFFS 117

Query: 153 ELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDL 212
           ELGDKTFFIAALLAARNSA  VF GTFGALAAMT+ISV+LGRTFHYVDEILPFRF +TDL
Sbjct: 118 ELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFXETDL 177

Query: 213 PIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKFN 252
           PIDDIAAV LLVYFGVSTLLDA+S+D  KS++EQKE+ F 
Sbjct: 178 PIDDIAAVGLLVYFGVSTLLDASSSDSQKSDEEQKEIIFE 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18407980|ref|NP_564825.1| uncharacterized protein [Arabidopsis thaliana] gi|308191633|sp|Q94AX5.2|GDT11_ARATH RecName: Full=GDT1-like protein 1, chloroplastic; Flags: Precursor gi|332196081|gb|AEE34202.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/231 (54%), Positives = 147/231 (63%), Gaps = 20/231 (8%)

Query: 40  CKNQTSTSKKLSLRNPYLN-----FSRELCRDPGASCENRNDVDC-----------KNCK 83
           C +        S+RN Y +       R   +  G  C  RND  C           +N  
Sbjct: 38  CVSAYPIPIGFSVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLD 97

Query: 84  MTRES--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISR 140
           +  ES   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS 
Sbjct: 98  VLVESSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISS 157

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVD
Sbjct: 158 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVD 217

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKF 251
           E+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKE + 
Sbjct: 218 EVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAEL 267

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	256
TAIR|locus:2024628	370	AT1G64150 [Arabidopsis thalian	0.710	0.491	0.553	3.8e-46
TAIR|locus:2140872	359	AT4G13590 [Arabidopsis thalian	0.347	0.247	0.457	9.5e-16
WB|WBGene00021847	297	Y54F10AL.1 [Caenorhabditis ele	0.25	0.215	0.442	1.4e-06
POMBASE|SPAC17G8.08c	287	SPAC17G8.08c "human TMEM165 ho	0.406	0.362	0.318	5.1e-06
ZFIN|ZDB-GENE-030131-3222	305	tmem165 "transmembrane protein	0.425	0.357	0.338	7.9e-06
MGI|MGI:894407	323	Tmem165 "transmembrane protein	0.410	0.325	0.316	8e-05
RGD|1306983	323	Tmem165 "transmembrane protein	0.410	0.325	0.316	8e-05
UNIPROTKB|F1P1B3	254	TMEM165 "Uncharacterized prote	0.410	0.413	0.307	0.00014
UNIPROTKB|B4DHW1	261	TMEM165 "cDNA FLJ60544, highly	0.410	0.402	0.316	0.00019
UNIPROTKB|E1B731	324	TMEM165 "Uncharacterized prote	0.410	0.324	0.307	0.00024

TAIR|locus:2024628 AT1G64150 [Arabidopsis thaliana (taxid:3702)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 109/197 (55%), Positives = 126/197 (63%)

Query:    68 GASCENRNDVDC-----------KNCKMTRES--VHNLANDSGLIKFVMFFGLLTLQGSQ 114
             G  C  RND  C           +N  +  ES   H+      ++ F+   G + L G+ 
Sbjct:    71 GFRCFQRNDAACYLEKAESEEHDRNLDVLVESSIAHSRREIQRVLMFLAVSGSVALLGTD 130

Query:   115 TAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXT 173
              A AA    +  QS     GDLGDIS GFASAFLLIFFSELGDKTFFI           T
Sbjct:   131 PAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFFSELGDKTFFIAALLAARNSAAT 190

Query:   174 VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD 233
             VF GTFGAL  MT+ISV+LGRTFHYVDE+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLD
Sbjct:   191 VFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLD 250

Query:   234 AASTDGLKSEDEQKEVK 250
             A S +G K+++EQKE +
Sbjct:   251 AVSDEG-KADEEQKEAE 266

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2140872 AT4G13590 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 9.5e-16, P = 9.5e-16
 Identities = 43/94 (45%), Positives = 60/94 (63%)

Query:   141 GFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTFHYVD 200
             GF +AF LIF SE+GDKTFFI            V  G+ GAL+ MT++SV++G+ F  V 
Sbjct:   145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203

Query:   201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA 234
                P +F QT LPI + AA+ LL++FG+ ++ DA
Sbjct:   204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDA 233

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

WB|WBGene00021847 Y54F10AL.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 132 (51.5 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 31/70 (44%), Positives = 42/70 (60%)

Query:   137 DIS--RGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGR 194
             DIS   GF ++F +I  SELGDKT+FI           TVF+G  GALA MTV+S  LG 
Sbjct:    62 DISFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLG- 120

Query:   195 TFHYVDEILP 204
                ++ +++P
Sbjct:   121 ---WITQVIP 127

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

POMBASE|SPAC17G8.08c SPAC17G8.08c "human TMEM165 homolog" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 127 (49.8 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 37/116 (31%), Positives = 55/116 (47%)

Query:   137 DISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTF 196
             D  R    +  +IF  E+GDKTF +           TVFAG++ AL  MT++ V+LG   
Sbjct:    45 DFLRSLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLG--- 101

Query:   197 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAST-DGLKS-EDEQKEVK 250
             H    + P +       + DI    L V FG+  L++A    D  +S  DE + V+
Sbjct:   102 HAAPLLFPRK-------LTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVR 150

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-3222 tmem165 "transmembrane protein 165" [Danio rerio (taxid:7955)]

 Score = 126 (49.4 bits), Expect = 7.9e-06, P = 7.9e-06
 Identities = 41/121 (33%), Positives = 55/121 (45%)

Query:   130 PFLGDLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVIS 189
             P  G+LG I   FA+A  +I  SELGDKTFFI           TV AG   AL  MT +S
Sbjct:    66 PNKGNLGFI-HAFAAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLS 124

Query:   190 VILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEV 249
             V+ G    Y   I+P  +           +  L   FGV  L +       + ++E +EV
Sbjct:   125 VLFG----YATTIIPRIYTY-------YISTALFAIFGVRMLREGLRMSPDEGQEELEEV 173

Query:   250 K 250
             +
Sbjct:   174 Q 174

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:894407 Tmem165 "transmembrane protein 165" [Mus musculus (taxid:10090)]

 Score = 118 (46.6 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 37/117 (31%), Positives = 53/117 (45%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   ALA MT +SV+ G
Sbjct:    90 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG 148

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
                 Y   ++P  +           +  L   FG+  L +       + ++E +EV+
Sbjct:   149 ----YATTVIPRVYTY-------YVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQ 194

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1306983 Tmem165 "transmembrane protein 165" [Rattus norvegicus (taxid:10116)]

 Score = 118 (46.6 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 37/117 (31%), Positives = 53/117 (45%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   ALA MT +SV+ G
Sbjct:    90 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG 148

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
                 Y   ++P  +           +  L   FG+  L +       + ++E +EV+
Sbjct:   149 ----YATTVIPRVYTY-------YVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQ 194

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1P1B3 TMEM165 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
 Identities = 36/117 (30%), Positives = 52/117 (44%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    20 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 78

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
                 Y   ++P  +           +  L   FG+  L +       + ++E +EV+
Sbjct:    79 ----YATTVIPRVYTY-------YVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQ 124

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B4DHW1 TMEM165 "cDNA FLJ60544, highly similar to Transmembrane protein TPARL" [Homo sapiens (taxid:9606)]

 Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
 Identities = 37/117 (31%), Positives = 54/117 (46%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    27 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 85

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
                 Y   ++P  +         ++ V L   FG+  L +       + ++E +EV+
Sbjct:    86 ----YATTVIPRVYTYY------VSTV-LFAIFGIRMLREGLKMSPDEGQEELEEVQ 131

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1B731 TMEM165 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
 Identities = 36/117 (30%), Positives = 52/117 (44%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    90 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 148

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVK 250
                 Y   ++P  +           +  L   FG+  L +       + ++E +EV+
Sbjct:   149 ----YATTVIPRVYTY-------YVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQ 194

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	256
pfam01169	78	pfam01169, UPF0016, Uncharacterized protein family	2e-15
COG2119	190	COG2119, COG2119, Predicted membrane protein [Func	2e-13
COG2119	190	COG2119, COG2119, Predicted membrane protein [Func	2e-07

>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAAT--VFAGTFGALAAMTVISVILGRTF 196
           F ++FLLIF +ELGDKT      LAAR S +   VF G   ALA  T+++V+LGR  
Sbjct: 1   FLTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALATLLAVLLGRWL 57

This family contains integral membrane proteins of unknown function. Most members of the family contain two copies of a region that contains an EXGD motif. Each of these regions contains three predicted transmembrane regions. Length = 78

>gnl|CDD|225030 COG2119, COG2119, Predicted membrane protein [Function unknown]

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 16/115 (13%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 201
              + L++  +E+GDKT  IA LLA R     VFAG   AL AM  ++V++G   H    
Sbjct: 4   LLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMHALAVLVG---HAAAS 60

Query: 202 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKFNYLII 256
           +LP R           A+  L + F V  L++       K +DE+ +      + 
Sbjct: 61  LLPER-------PLAWASGVLFLAFAVWMLIED------KEDDEEAQAASPRGVF 102

Length = 190

>gnl|CDD|225030 COG2119, COG2119, Predicted membrane protein [Function unknown]

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 11/99 (11%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAAR-NSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           F + F+  F +ELGDKT      LAA  +S   VFAGT   +   +V++V+LG+      
Sbjct: 102 FVTTFITFFLAELGDKTQIATIALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIA--- 158

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDG 239
                  G+    +    A  L + F +  L       G
Sbjct: 159 -------GKLPERLLRFIAALLFLIFALVLLWQVFEALG 190

Length = 190

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	256
KOG2881	294	consensus Predicted membrane protein [Function unk	99.93
PF01169	78	UPF0016: Uncharacterized protein family UPF0016; I	99.89
COG2119	190	Predicted membrane protein [Function unknown]	99.85
COG2119	190	Predicted membrane protein [Function unknown]	99.84
KOG2881	294	consensus Predicted membrane protein [Function unk	99.72
TIGR02840	206	spore_YtaF putative sporulation protein YtaF. This	96.66
COG4280	236	Predicted membrane protein [Function unknown]	96.11
PRK11469	188	hypothetical protein; Provisional	95.28
PF03596	191	Cad: Cadmium resistance transporter; InterPro: IPR	93.44
COG1971	190	Predicted membrane protein [Function unknown]	91.12
PF01810	191	LysE: LysE type translocator; InterPro: IPR001123	88.8
COG4300	205	CadD Predicted permease, cadmium resistance protei	84.45
PF03741	183	TerC: Integral membrane protein TerC family; Inter	82.7
TIGR00948	177	2a75 L-lysine exporter.	81.24
COG1280	208	RhtB Putative threonine efflux protein [Amino acid	80.38
PRK10229	206	threonine efflux system; Provisional	80.23

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=99.93  E-value=1.7e-26  Score=211.42  Aligned_cols=107  Identities=37%  Similarity=0.604  Sum_probs=96.0

Q ss_pred             cchhHHHHHHHHHHHHHhcCchHHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhH
Q 025229          136 GDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPID  215 (256)
Q Consensus       136 ~~~l~aFlsAF~lIFLAELGDKTQLatalLAaR~~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii  215 (256)
                      .++..+|..+|+|||++|+||||||++++|||||+|..||.|+..||++||++++++|+..   ++.+|+++       +
T Consensus        63 ~s~~~~f~~SiSmI~vsEiGDKTFfiAAlmAmr~~R~~Vf~Ga~~AL~lMTiLS~~lG~aa---p~lipr~~-------T  132 (294)
T KOG2881|consen   63 SSFLQGFTASISMIFVSEIGDKTFFIAALMAMRYPRLTVFSGAMSALALMTILSVLLGWAA---PNLIPRKY-------T  132 (294)
T ss_pred             HHHHHHHHHhhheeeeeeccchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHhh---hhhchHHH-------H
Confidence            5689999999999999999999999999999999999999999999999999999999865   58899988       9


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCC--CCchhHHHHhhhh
Q 025229          216 DIAAVCLLVYFGVSTLLDAASTDG--LKSEDEQKEVKFN  252 (256)
Q Consensus       216 ~~iAa~LFl~FGl~tL~ea~~~~~--~~~e~E~~EaEl~  252 (256)
                      ++++++||++||+|||+|++++.+  .++|.||+|+|++
T Consensus       133 ~~~~t~LF~iFGlkmL~eg~~~~~~~~~eE~eEVe~el~  171 (294)
T KOG2881|consen  133 YYLATALFLIFGLKMLKEGWEMSPSEGQEELEEVEAELA  171 (294)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHH
Confidence            999999999999999999987544  3445566666665

>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities

Probab=99.89  E-value=9.4e-24  Score=160.99  Aligned_cols=76  Identities=43%  Similarity=0.603  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHhcc--CCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHH
Q 025229          142 FASAFLLIFFSELGDKTFFIAALLAARN--SAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAA  219 (256)
Q Consensus       142 FlsAF~lIFLAELGDKTQLatalLAaR~--~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iA  219 (256)
                      |+++|.++|++|+|||||++++.||+||  ++|.|++|+.+|++++|+++|++|+++   .+++|+++       +++++
T Consensus         1 F~~sf~~iflaE~GDKTQl~t~~La~~~~~~~~~V~~G~~~al~~~~~lav~~G~~l---~~~ip~~~-------i~~~~   70 (78)
T PF01169_consen    1 FLTSFLLIFLAELGDKTQLATIALAARYPRNPWPVFAGATLALALATGLAVLLGSWL---ASRIPERY-------IKWVA   70 (78)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCHHH-------HHHHH
Confidence            5789999999999999999999999999  789999999999999999999999976   68999998       99999


Q ss_pred             HHHHHHHH
Q 025229          220 VCLLVYFG  227 (256)
Q Consensus       220 a~LFl~FG  227 (256)
                      +++|++||
T Consensus        71 ~~lFl~fG   78 (78)
T PF01169_consen   71 GALFLLFG   78 (78)
T ss_pred             HHHHHHHC
Confidence            99999997

These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane

>COG2119 Predicted membrane protein [Function unknown]

Probab=99.85  E-value=4.9e-21  Score=167.91  Aligned_cols=88  Identities=32%  Similarity=0.449  Sum_probs=82.5

Q ss_pred             hHHHHHHHHHHHHHhcCchHHHHHHHHHhccCC-chhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHH
Q 025229          139 SRGFASAFLLIFFSELGDKTFFIAALLAARNSA-ATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDI  217 (256)
Q Consensus       139 l~aFlsAF~lIFLAELGDKTQLatalLAaR~~~-~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~  217 (256)
                      +..|+++|+++|++|||||||++|++||++|+. |.||+|+.+||+++++++|++|+++   ++++|+|.       ++.
T Consensus        99 ~~~f~~tfi~~FlaE~GDKTQiATIaLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~i---a~ki~~r~-------l~~  168 (190)
T COG2119          99 RGVFVTTFITFFLAELGDKTQIATIALAADYHSPWAVFAGTTLGMILASVLAVLLGKLI---AGKLPERL-------LRF  168 (190)
T ss_pred             ccHHHHHHHHHHHHHhccHHHHHHHHHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHH---HccCCHHH-------HHH
Confidence            559999999999999999999999999999875 9999999999999999999999965   79999997       999


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 025229          218 AAVCLLVYFGVSTLLDAAS  236 (256)
Q Consensus       218 iAa~LFl~FGl~tL~ea~~  236 (256)
                      +++++|++||+.++|+...
T Consensus       169 ~aallFl~fal~~~~~~~~  187 (190)
T COG2119         169 IAALLFLIFALVLLWQVFE  187 (190)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998654

>COG2119 Predicted membrane protein [Function unknown]

Probab=99.84  E-value=4.6e-21  Score=168.04  Aligned_cols=89  Identities=35%  Similarity=0.463  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHH
Q 025229          140 RGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAA  219 (256)
Q Consensus       140 ~aFlsAF~lIFLAELGDKTQLatalLAaR~~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iA  219 (256)
                      .+++.+.++|++||+|||||+++++||+||+||+||.|+..|++.||.+++++|++.   ...+|+++       .+|++
T Consensus         2 ~~~~~s~~~v~laEiGDKT~lia~llA~r~~~~~v~~g~~~a~~~m~~la~~vG~~~---~~~~~~~~-------~~~~~   71 (190)
T COG2119           2 EALLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMHALAVLVGHAA---ASLLPERP-------LAWAS   71 (190)
T ss_pred             hhHHHHHHHHHHHHhccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHH---hccCchhH-------HHHHH
Confidence            578899999999999999999999999999999999999999999999999999865   67889987       89999


Q ss_pred             HHHHHHHHHHHHHhhhcCC
Q 025229          220 VCLLVYFGVSTLLDAASTD  238 (256)
Q Consensus       220 a~LFl~FGl~tL~ea~~~~  238 (256)
                      +++|++||+|+++|.-.++
T Consensus        72 ~~~Flafav~~l~edk~~~   90 (190)
T COG2119          72 GVLFLAFAVWMLIEDKEDD   90 (190)
T ss_pred             HHHHHHHHHHHhccccccc
Confidence            9999999999999854443

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=2.8e-18  Score=157.72  Aligned_cols=87  Identities=26%  Similarity=0.345  Sum_probs=81.9

Q ss_pred             hHHHHHHHHHHHHHhcCchHHHHHHHHHhccCCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHH
Q 025229          139 SRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIA  218 (256)
Q Consensus       139 l~aFlsAF~lIFLAELGDKTQLatalLAaR~~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~i  218 (256)
                      ...|+.+|.++|++|||||+|++|++||++.+++.|++|+.+|+.+||+++|+.|+.+   +++|++|.       +.++
T Consensus       206 spifikaFsltF~aEwGDRSQlaTI~laA~en~~gV~~G~~iGH~lCT~lAVigGk~l---AskIS~rt-------Vt~~  275 (294)
T KOG2881|consen  206 SPIFIKAFSLTFLAEWGDRSQLATIALAADENPLGVAIGAIIGHALCTGLAVIGGKYL---ASKISVRT-------VTLI  275 (294)
T ss_pred             cHHHHHHHHHHHHHHhccHHHHHHHHHhcccCcceeeeccHHHHHHHHHHHHhhhHHH---hhhheeEE-------EEEe
Confidence            4689999999999999999999999999999999999999999999999999999965   78999987       8999


Q ss_pred             HHHHHHHHHHHHHHhhh
Q 025229          219 AVCLLVYFGVSTLLDAA  235 (256)
Q Consensus       219 Aa~LFl~FGl~tL~ea~  235 (256)
                      ++++|+.||+..++++.
T Consensus       276 ggi~Fi~Fgl~~i~~~~  292 (294)
T KOG2881|consen  276 GGILFIIFGLVYIFQGF  292 (294)
T ss_pred             cchhHHHHHHHHHhcCC
Confidence            99999999999988754

>TIGR02840 spore_YtaF putative sporulation protein YtaF

Probab=96.66  E-value=0.0054  Score=54.21  Aligned_cols=51  Identities=20%  Similarity=0.343  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 025229          179 FGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDG  239 (256)
Q Consensus       179 ~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~ea~~~~~  239 (256)
                      .....+|+.++..+|+.+   .+++|.++       .++++++++++.|++|++|++..++
T Consensus        37 g~~~~~~~~lg~~~G~~~---~~~i~~~~-------~~~ig~~iLi~iG~~mi~~~~~~~~   87 (206)
T TIGR02840        37 AVISGLFIFISMLLGKFL---AKFLPPKV-------TEILGAFILIAIGIWIIYNAFRPKK   87 (206)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHhchhh-------HHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            334558999999999976   57888766       8999999999999999999987544

This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.

>COG4280 Predicted membrane protein [Function unknown]

Probab=96.11  E-value=0.042  Score=50.36  Aligned_cols=56  Identities=21%  Similarity=0.403  Sum_probs=50.3

Q ss_pred             cCCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 025229          169 NSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA  235 (256)
Q Consensus       169 ~~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~ea~  235 (256)
                      ++...-+.|+.+|+++.-.++.++|..+    ..+|..+       .+++++++.+.||..-++.+.
T Consensus        31 ~~wr~al~ga~lglalvl~l~lvlGk~L----~lvPln~-------lqiv~gvLLllFG~rw~Rsav   86 (236)
T COG4280          31 YKWRLALIGAVLGLALVLILTLVLGKLL----YLVPLNY-------LQIVSGVLLLLFGYRWIRSAV   86 (236)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHccce----eeeechH-------HHHHHHHHHHHHHHHHHHHHH
Confidence            5667899999999999999999999988    5789887       899999999999998887764

>PRK11469 hypothetical protein; Provisional

Probab=95.28  E-value=0.015  Score=50.96  Aligned_cols=47  Identities=13%  Similarity=0.205  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHhhhcCCC
Q 025229          182 LAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDG  239 (256)
Q Consensus       182 L~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~ea~~~~~  239 (256)
                      .++|+.++-.+|+.+   .+++|. +       .+|++++++++.|+||++|+++.++
T Consensus        47 q~~m~~~g~~~G~~l---~~~i~~-~-------~~~i~~~lL~~lG~~mi~e~~~~~~   93 (188)
T PRK11469         47 ETLTPLIGWGMGMLA---SRFVLE-W-------NHWIAFVLLIFLGGRMIIEGFRGAD   93 (188)
T ss_pred             HHHHHHHHHHHHHHH---HHHHHH-H-------HHHHHHHHHHHHHHHHHHHHHhccc
Confidence            367888888899876   456654 4       7999999999999999999987553

>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family

Probab=93.44  E-value=0.23  Score=44.16  Aligned_cols=53  Identities=11%  Similarity=0.219  Sum_probs=41.4

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHh
Q 025229          170 SAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD  233 (256)
Q Consensus       170 ~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~e  233 (256)
                      +++.|.+|-.+|..+.-++|.+++..+    ..+|+.|       +-=.-|.+=+++|++.++.
T Consensus        24 ~~~~I~~GqylG~~~Lv~~Sl~~~~~l----~~ip~~w-------iLGlLGliPI~lGi~~l~~   76 (191)
T PF03596_consen   24 RRRQIVIGQYLGFTILVLASLLGAFGL----LFIPPEW-------ILGLLGLIPIYLGIKALFS   76 (191)
T ss_pred             ChhhhhhhHHHHHHHHHHHHHHHHHHH----HhCCHHH-------HHHHHHHHHHHHHHHHHHc
Confidence            478999999999998888888888765    4788776       4233567778999998874

To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.

>COG1971 Predicted membrane protein [Function unknown]

Probab=91.12  E-value=0.17  Score=45.35  Aligned_cols=51  Identities=14%  Similarity=0.307  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHhhhcCCCCCch
Q 025229          182 LAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSE  243 (256)
Q Consensus       182 L~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~ea~~~~~~~~e  243 (256)
                      .++|-+++-+.|..+   .+++ ..+       .+|++++++++.|+||++++++.++++.+
T Consensus        47 ~~i~pliG~~~g~~~---s~~i-~~~-------~~wigf~lL~~lG~~mI~e~f~~~~~~~~   97 (190)
T COG1971          47 QAIMPLIGWFIGKFL---STFI-AEW-------AHWIGFVLLIILGLKMIIEGFKNEEDEFV   97 (190)
T ss_pred             HHHHHHHHHHHHHHH---HHHH-HHH-------HHHHHHHHHHHHHHHHHHHHhchhhcchh
Confidence            456677777777765   2222 233       79999999999999999999987654433

>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine

Probab=88.80  E-value=1.4  Score=36.83  Aligned_cols=72  Identities=15%  Similarity=0.121  Sum_probs=50.6

Q ss_pred             HHHHHHHhccCC---chhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHhhhc
Q 025229          160 FIAALLAARNSA---ATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAS  236 (256)
Q Consensus       160 LatalLAaR~~~---~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~ea~~  236 (256)
                      +..+--++++++   ..+.+|...+-++...++++....+   .+..|.-     ..++++++++.++++|+++++...+
T Consensus        12 ~~~i~~~~~~G~~~~~~~~~G~~~~~~i~~~~~~~g~~~l---~~~~~~~-----~~~l~~~G~~~L~~lg~~~~~~~~~   83 (191)
T PF01810_consen   12 LLVISNGLRKGFKAGLPVALGAALGDLIYILLAVFGLSAL---LKSSPWL-----FMILKLLGALYLLYLGYKLLRSKFS   83 (191)
T ss_pred             HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhChHH-----HHHHHHHHHHHHHHHHHHHHhcccC
Confidence            445566667664   4777888888888887777766544   2333332     2458999999999999999987665


Q ss_pred             CCC
Q 025229          237 TDG  239 (256)
Q Consensus       237 ~~~  239 (256)
                      .+.
T Consensus        84 ~~~   86 (191)
T PF01810_consen   84 SKS   86 (191)
T ss_pred             cch
Confidence            444

A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane

>COG4300 CadD Predicted permease, cadmium resistance protein [Inorganic ion transport and metabolism]

Probab=84.45  E-value=4.9  Score=36.61  Aligned_cols=80  Identities=14%  Similarity=0.240  Sum_probs=46.2

Q ss_pred             chHHHHHHHHHhc---cCCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHH
Q 025229          156 DKTFFIAALLAAR---NSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLL  232 (256)
Q Consensus       156 DKTQLatalLAaR---~~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~  232 (256)
                      |--=+..+.+|.+   .+.+-+++|=.+|.+..-+.|.++.-    +.+.+|++|       +-=.-|.+=++.|+|.++
T Consensus        18 D~lIiL~l~Far~~~~k~~~~I~~GQyLGs~~lilaSL~~a~----v~~fvp~e~-------I~glLGLIPi~LGik~l~   86 (205)
T COG4300          18 DLLIILLLFFARRKSRKDILHIYLGQYLGSVILILASLLFAF----VLNFVPEEW-------ILGLLGLIPIYLGIKVLI   86 (205)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEeHHHHHhHHHHHHHHHHHHH----HHhhCcHHH-------HHHHHhHHHHHHhhHHhh
Confidence            4334444555544   33578888877765554444433332    235678887       444556777899999998


Q ss_pred             hhhcCCCCCchhHH
Q 025229          233 DAASTDGLKSEDEQ  246 (256)
Q Consensus       233 ea~~~~~~~~e~E~  246 (256)
                      .+..++++++++|.
T Consensus        87 ~~d~d~e~~~~e~L  100 (205)
T COG4300          87 LGDDDGEEEAKEEL  100 (205)
T ss_pred             cccCcCchhhhHHH
Confidence            76553333333333

>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein

Probab=82.70  E-value=5  Score=35.16  Aligned_cols=68  Identities=19%  Similarity=0.332  Sum_probs=47.0

Q ss_pred             CchHHHHHHHHHh---ccCCchhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHH
Q 025229          155 GDKTFFIAALLAA---RNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTL  231 (256)
Q Consensus       155 GDKTQLatalLAa---R~~~~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL  231 (256)
                      +|.-.+++++..-   +++++..+.|...|+++-.++-..+...++    ..         +++++++|+..++-|++++
T Consensus        12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~----~~---------~~i~~igG~~Ll~~a~k~~   78 (183)
T PF03741_consen   12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLS----IF---------PWILLIGGLFLLYIAIKLL   78 (183)
T ss_pred             hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHH----HH---------HHHHHHHHHHHHHHHHHHH
Confidence            5665555554432   235689999999999877777666665542    21         2478888888888888888


Q ss_pred             Hhhh
Q 025229          232 LDAA  235 (256)
Q Consensus       232 ~ea~  235 (256)
                      ++..
T Consensus        79 ~~~~   82 (183)
T PF03741_consen   79 HEER   82 (183)
T ss_pred             Hhcc
Confidence            8765

TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane

>TIGR00948 2a75 L-lysine exporter

Probab=81.24  E-value=4.7  Score=33.80  Aligned_cols=67  Identities=10%  Similarity=0.030  Sum_probs=44.9

Q ss_pred             HHHHHHhccCC-chhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 025229          161 IAALLAARNSA-ATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA  235 (256)
Q Consensus       161 atalLAaR~~~-~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~tL~ea~  235 (256)
                      .++..++++++ ..+.+|...|.++...++++.-..+   ....|.-.     .++++++++-.+++|+.+++...
T Consensus        11 ~vi~~~~~~~~g~~~~~G~~~g~~i~~~~~~~Gl~~l---l~~~p~~~-----~~l~~~Ga~YLlylg~~~~r~~~   78 (177)
T TIGR00948        11 FVLRQGIRREHVLLIVALCCICDLVLIAAGVFGVAAL---LAASPILL-----AVLTWGGALFLLWYGFLAAKTAW   78 (177)
T ss_pred             HHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCHHHH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence            34444555443 4677888888888877776655433   23344332     35889999888999999998754

>COG1280 RhtB Putative threonine efflux protein [Amino acid transport and metabolism]

Probab=80.38  E-value=9.1  Score=33.58  Aligned_cols=71  Identities=13%  Similarity=0.140  Sum_probs=48.1

Q ss_pred             cCchHHHHHHHHHhccCC---chhhHHHHHHHHHHHHHHHHH-hcccccccccCCccccCCCchhHHHHHHHHHHHHHHH
Q 025229          154 LGDKTFFIAALLAARNSA---ATVFAGTFGALAAMTVISVIL-GRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVS  229 (256)
Q Consensus       154 LGDKTQLatalLAaR~~~---~~VflGs~lAL~lmT~LaVll-G~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FGl~  229 (256)
                      -|.- .+.++.-++++++   +.+-+|..+|.++...++++. +..++    ..|.-+     .++++++++-.+++|++
T Consensus        20 PGP~-~~~v~~~~~~~G~~~g~~~~~G~~~G~~v~~~l~~~Gl~all~----~~~~~f-----~~lk~~GaaYL~ylg~~   89 (208)
T COG1280          20 PGPD-NLLVLARSLSRGRRAGLATALGIALGDLVHMLLAALGLAALLA----TSPALF-----TVLKLAGAAYLLYLGWK   89 (208)
T ss_pred             CCcc-HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhHHHH-----HHHHHHHHHHHHHHHHH
Confidence            4543 4445566677664   577788888888877777664 34432    223222     35899999999999999


Q ss_pred             HHHhh
Q 025229          230 TLLDA  234 (256)
Q Consensus       230 tL~ea  234 (256)
                      +++..
T Consensus        90 ~~ra~   94 (208)
T COG1280          90 ALRAG   94 (208)
T ss_pred             HHhcc
Confidence            99876

>PRK10229 threonine efflux system; Provisional

Probab=80.23  E-value=12  Score=32.16  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=50.6

Q ss_pred             HHhcCchHHHHHHHHHhccCC---chhhHHHHHHHHHHHHHHHHHhcccccccccCCccccCCCchhHHHHHHHHHHHHH
Q 025229          151 FSELGDKTFFIAALLAARNSA---ATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFG  227 (256)
Q Consensus       151 LAELGDKTQLatalLAaR~~~---~~VflGs~lAL~lmT~LaVllG~~L~~i~~~LP~r~~~~d~~ii~~iAa~LFl~FG  227 (256)
                      ..--|- ..+.++--+.++++   ....+|...|.++..+++++.-..+   -...|.-     ..++++++++..+++|
T Consensus        16 ~~sPGP-~~~~vi~~~~~~G~~~~~~~~~G~~~g~~i~~~l~~~Gl~~l---l~~~p~~-----~~~l~~~Ga~yLlylg   86 (206)
T PRK10229         16 LMSPGP-DFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGVALLGLHLI---LEKMAWL-----HTIIMVGGGLYLCWMG   86 (206)
T ss_pred             hcCCCc-hhHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhHHH-----HHHHHHHHHHHHHHHH
Confidence            333465 66677777777764   3566788888888777766655433   1233432     2358898888889999


Q ss_pred             HHHHHhhh
Q 025229          228 VSTLLDAA  235 (256)
Q Consensus       228 l~tL~ea~  235 (256)
                      +.+++++.
T Consensus        87 ~~~~~~~~   94 (206)
T PRK10229         87 YQMLRGAL   94 (206)
T ss_pred             HHHHHhcc
Confidence            99988653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	256
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 2e-05
 Identities = 32/229 (13%), Positives = 75/229 (32%), Gaps = 59/229 (25%)

Query: 76  DVDCKNCK------MTRESVHNLANDSGLIKFVMF-FGLLTLQGSQTAVAAVDFASGLQ- 127
           + DCK+ +      +++E + ++      +   +  F  L  +  +     V+    L+ 
Sbjct: 32  NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE--EVLRI 89

Query: 128 SFPFLGD-LGDISRGFASAFLLIFFSELGDKTF-----FI--------------AALLAA 167
           ++ FL   +    R    + +   + E  D+ +     F                ALL  
Sbjct: 90  NYKFLMSPIKTEQRQ--PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 168 RNSAATVFAGTFGA----LAAMTVISVILGRTFHYVDEILPFR-----FGQTDLPIDDIA 218
           R +   +  G  G+    +A    +S       + V   + F+         + P   + 
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLS-------YKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 219 ---AVCLLVYFGVSTLLDAASTDGLKSEDEQKEVKF--------NYLII 256
               +   +    ++  D +S   L+    Q E++         N L++
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00