Citrus Sinensis ID: 025270

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Secondary Structure (PSIPRED)
cccccccccEEEEcccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHccccccEEEccccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEcccccccccHHHHHHHHHccccEEEEEEcccEcccccccccccccccccccHHHHHHHHHHHccccEEEEEEEEEEcccccccHHHHHHHHHHcccccccccccccEEEEEEHHHHHHHHHHHHHccHHcccEEEEEccccEEEHHHHHHHHHHHHcccccEEEcccccccccccccccccccHccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MEFNYAKFKALFRTNnnfrlqrpvadwakssgvkQFLFISsagiykpadepphvegdvvkpdaghVQVEKYISENfsnwasfrpqymigsgnnkdceEWFFDRivrkrpvpipgsgmqftniahvRDLSSMLTlavenpeaassNIFNLVSDRAVTLDGMAKLCAQAaglpveivhydpkaagidakkafpfrnmhfyaepraakdilgwrsttnlpeDLKERFEEYVKIGRDKKAMQFEIDDKILEslkvpipv
Flexible Loop (DISEMBL)
MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEpraakdilgwrsttnlpedlkERFEEYVKIGRDKKAMQFEIDDKileslkvpipv
Low Complexity Region (SEG)
MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Disordered region (IsUnstruct)
***NYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKP********GDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKI**********
Disordered Region (DISOPRED)
****YAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP***
Disordered Region (DISEMBL)
MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Disordered Region (DISPRO)
**FNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
Q9LYA9	406	Chloroplast stem-loop bin	yes	no	0.909	0.571	0.840	1e-116
Q9SA52	378	Chloroplast stem-loop bin	no	no	0.835	0.563	0.417	7e-44

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  417 bits (1073), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 195/232 (84%), Positives = 208/232 (89%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
           RPV DWAKSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWAS
Sbjct: 173 RPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWAS 232

Query: 82  FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
           FRPQYMIGSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEA
Sbjct: 233 FRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEA 292

Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
           AS NIFN VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAF FRNMHFYAEP
Sbjct: 293 ASGNIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEP 352

Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
           RAAKD+LGW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct: 353 RAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score =  177 bits (449), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 91/218 (41%), Positives = 126/218 (57%), Gaps = 5/218 (2%)

Query: 33  VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
           ++Q+++ SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G
Sbjct: 155 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214

Query: 90  SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
             N    EEWFF R+   RP+P+P SG+Q + + HV+DL++   L V   E AS  IFN+
Sbjct: 215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNI 273

Query: 150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
             ++ VT DG+AK CA+A G P  EIVHY+PK      KKAFPFR+ HF+A    AK +L
Sbjct: 274 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333

Query: 209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
           GW+   +L E L + +      G  +K   F  DD IL
Sbjct: 334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
224082634	377	predicted protein [Populus trichocarpa]	0.972	0.657	0.867	1e-124
224066507	404	predicted protein [Populus trichocarpa]	0.909	0.574	0.896	1e-121
225436924	397	PREDICTED: uncharacterized protein At3g6	0.980	0.629	0.832	1e-119
296086699	284	unnamed protein product [Vitis vinifera]	0.980	0.880	0.832	1e-118
356535978	404	PREDICTED: uncharacterized protein At3g6	0.917	0.579	0.854	1e-118
32746733	405	mRNA-binding protein precursor, partial	0.964	0.607	0.821	1e-117
356500206	403	PREDICTED: uncharacterized protein At3g6	0.945	0.598	0.831	1e-117
312273915	306	CSP41A-X protein [Silene latifolia]	0.945	0.787	0.831	1e-117
255647134	403	unknown [Glycine max]	0.945	0.598	0.827	1e-117
343172519	384	chloroplast stem-loop binding protein, p	0.933	0.619	0.833	1e-117

>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa] gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]

 Score =  450 bits (1158), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/249 (86%), Positives = 225/249 (90%), Gaps = 1/249 (0%)

Query: 6   AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
           A F  +   N  +    RPV DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAG
Sbjct: 127 ATFDVVLDNNGKDLDTVRPVVDWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAG 186

Query: 65  HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
           HV VEKYI+E FS+WA FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH
Sbjct: 187 HVGVEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAH 246

Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
           VRDLSSMLTLAVENPEAAS NIFN VSDRAVTLDGMAKLCAQAAGLPVEI+HYDPKA GI
Sbjct: 247 VRDLSSMLTLAVENPEAASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVEIMHYDPKAVGI 306

Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
           DAKKAFPFRNMHFYAEPRAAKDILGW+ TTNLPEDLKERF+EYVKIGRDKK MQFEIDDK
Sbjct: 307 DAKKAFPFRNMHFYAEPRAAKDILGWQGTTNLPEDLKERFDEYVKIGRDKKPMQFEIDDK 366

Query: 245 ILESLKVPI 253
           ILESLKVP+
Sbjct: 367 ILESLKVPV 375

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/232 (89%), Positives = 216/232 (93%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
           RPV DWAKS+GVKQFLFISSAGIYK  DEPPHVEGDVVK DAGHV VEKYI+E FS+WA 
Sbjct: 171 RPVVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAI 230

Query: 82  FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
           FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ TNIAH RDLSSMLTLAVENPEA
Sbjct: 231 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQLTNIAHARDLSSMLTLAVENPEA 290

Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
           AS  IFN VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK  GIDAKKAFPFRNMHFYAEP
Sbjct: 291 ASGRIFNCVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKVVGIDAKKAFPFRNMHFYAEP 350

Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
           RAAK+ILGW+ TTNLPEDLKERF++YVKIGRDKK MQFEIDDKILESLKVP+
Sbjct: 351 RAAKEILGWQGTTNLPEDLKERFDDYVKIGRDKKPMQFEIDDKILESLKVPV 402

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis vinifera] gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 209/251 (83%), Positives = 217/251 (86%), Gaps = 1/251 (0%)

Query: 6   AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
           A F  +   N  +    RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAG
Sbjct: 147 AAFDVVLDNNGKDIDTVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAG 206

Query: 65  HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
           HV VE YISE F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAH
Sbjct: 207 HVGVETYISEVFGSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAH 266

Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
           VRDLSSMLTLAVENP AAS NIFN VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GI
Sbjct: 267 VRDLSSMLTLAVENPAAASGNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGI 326

Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
           DAKKAFPFRNMHFYAEPRAAKDILGW   TNLPEDLKERF+EYVKIGRDKK M+FEIDDK
Sbjct: 327 DAKKAFPFRNMHFYAEPRAAKDILGWHGITNLPEDLKERFDEYVKIGRDKKPMKFEIDDK 386

Query: 245 ILESLKVPIPV 255
           ILESLKV + V
Sbjct: 387 ILESLKVSVAV 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086699|emb|CBI32334.3| unnamed protein product [Vitis vinifera]

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/251 (83%), Positives = 217/251 (86%), Gaps = 1/251 (0%)

Query: 6   AKFKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG 64
           A F  +   N  +    RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAG
Sbjct: 34  AAFDVVLDNNGKDIDTVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAG 93

Query: 65  HVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAH 124
           HV VE YISE F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAH
Sbjct: 94  HVGVETYISEVFGSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGMQLTNIAH 153

Query: 125 VRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI 184
           VRDLSSMLTLAVENP AAS NIFN VSDRAVTLDGMAKLCAQAAG PV IVHYDPKA GI
Sbjct: 154 VRDLSSMLTLAVENPAAASGNIFNCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGI 213

Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
           DAKKAFPFRNMHFYAEPRAAKDILGW   TNLPEDLKERF+EYVKIGRDKK M+FEIDDK
Sbjct: 214 DAKKAFPFRNMHFYAEPRAAKDILGWHGITNLPEDLKERFDEYVKIGRDKKPMKFEIDDK 273

Query: 245 ILESLKVPIPV 255
           ILESLKV + V
Sbjct: 274 ILESLKVSVAV 284

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535978|ref|XP_003536518.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max]

 Score =  429 bits (1102), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/234 (85%), Positives = 214/234 (91%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
           RPV DWAKSSGVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI E + +WA 
Sbjct: 171 RPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYIEETYGSWAV 230

Query: 82  FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
           FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSMLTLAVENPEA
Sbjct: 231 FRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSMLTLAVENPEA 290

Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
           A+  IFN VSDRAVTLDG+AKLCAQAAG PV IVHYDPKA G+DAKKAFPFR  HFYAEP
Sbjct: 291 ANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRTYHFYAEP 350

Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 255
           RAAK  LGW+STTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP+ V
Sbjct: 351 RAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVSV 404

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/247 (82%), Positives = 218/247 (88%), Gaps = 1/247 (0%)

Query: 8   FKALFRTNN-NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV 66
           F A+   N  +    RPVADWAKSSG KQFLFISSAGIYK  DEPPHVEGD VK DAGHV
Sbjct: 157 FDAVLDNNGKDLDAVRPVADWAKSSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHV 216

Query: 67  QVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVR 126
            VEKYISE F +WASFRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSGMQ TNIAHVR
Sbjct: 217 GVEKYISEIFDSWASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSGMQLTNIAHVR 276

Query: 127 DLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA 186
           DLSSMLT AV+NP AAS +IFN VSDRAVTLDGMAKLCA+AAG  VEIVHYDPKA G+DA
Sbjct: 277 DLSSMLTAAVQNPAAASGHIFNCVSDRAVTLDGMAKLCAKAAGFSVEIVHYDPKAVGVDA 336

Query: 187 KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
           KKAFPFRNMHFY+EPRAAK+ILGW +TTNLPEDLKERF+EYVKIGRDKK M+FE+DDKIL
Sbjct: 337 KKAFPFRNMHFYSEPRAAKEILGWSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKIL 396

Query: 247 ESLKVPI 253
           E+LKVP+
Sbjct: 397 EALKVPV 403

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500206|ref|XP_003518924.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic-like [Glycine max]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/243 (83%), Positives = 218/243 (89%), Gaps = 2/243 (0%)

Query: 15  NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
           NN   L+  RPV DWAKSSGVKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI
Sbjct: 161 NNGKDLETVRPVIDWAKSSGVKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYI 220

Query: 73  SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
            E F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSML
Sbjct: 221 EETFGSWAVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSML 280

Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
           TLAVENPEAA+  IFN VSDRAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPF
Sbjct: 281 TLAVENPEAANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPF 340

Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
           R  HFYAEPRAAK  LGW+STTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP
Sbjct: 341 RTYHFYAEPRAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVP 400

Query: 253 IPV 255
           + V
Sbjct: 401 VTV 403

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312273915|gb|ADQ57386.1| CSP41A-X protein [Silene latifolia]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/243 (83%), Positives = 221/243 (90%), Gaps = 2/243 (0%)

Query: 15  NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
           NN   L+  RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 64  NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 123

Query: 73  SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
           S+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 124 SQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 183

Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
           TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 184 TLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 243

Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
           RNMHFYAEPRAAK+ILGW+S+T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 244 RNMHFYAEPRAAKEILGWKSSTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 303

Query: 253 IPV 255
             V
Sbjct: 304 AAV 306

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647134|gb|ACU24035.1| unknown [Glycine max]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 201/243 (82%), Positives = 217/243 (89%), Gaps = 2/243 (0%)

Query: 15  NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
           NN   L+  RPV DWAKSSGVKQFLF+SSAGIYKP DEPPHVEGDVVK DAGHV+VEKYI
Sbjct: 161 NNGKGLETVRPVIDWAKSSGVKQFLFVSSAGIYKPTDEPPHVEGDVVKADAGHVEVEKYI 220

Query: 73  SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
            E F +WA FRPQYMIGSGNNKDCEEWFFDRIVR RPVPIPGSG+Q +NIAHVRDLSSML
Sbjct: 221 EETFGSWAVFRPQYMIGSGNNKDCEEWFFDRIVRDRPVPIPGSGLQLSNIAHVRDLSSML 280

Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
           TLAV NPEAA+  IFN VSDRAVTLDG+AKLCAQAAG PV I+HYDPKA G+DAKKAFPF
Sbjct: 281 TLAVGNPEAANQTIFNCVSDRAVTLDGIAKLCAQAAGRPVNILHYDPKAVGVDAKKAFPF 340

Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
           R  HFYAEPRAAK  LGW+STTNLPEDLKERFEEYVKIGRDKK++QFE+DDKILE+LKVP
Sbjct: 341 RTYHFYAEPRAAKAKLGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVP 400

Query: 253 IPV 255
           + V
Sbjct: 401 VTV 403

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/240 (83%), Positives = 220/240 (91%), Gaps = 2/240 (0%)

Query: 15  NNNFRLQ--RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI 72
           NN   L+  RPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YI
Sbjct: 143 NNGKDLETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYI 202

Query: 73  SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
           S+ FS+WASFRPQYMIGSGNNKDCEEWFFDRIVR RP+PIPGSGMQ TNI+HV+DLSSML
Sbjct: 203 SQTFSSWASFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVKDLSSML 262

Query: 133 TLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
           TLAVENP +AS NIFN VSDRAVTLDGMAKLCAQAAGLPV+IVHYDPKA GIDAKKAFPF
Sbjct: 263 TLAVENPASASGNIFNCVSDRAVTLDGMAKLCAQAAGLPVKIVHYDPKAIGIDAKKAFPF 322

Query: 193 RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVP 252
           RNMHFYAEPRAAK+ILGW+++T LP+DLKER+EEYVKIGRDKK ++FE+DDKILE+LK P
Sbjct: 323 RNMHFYAEPRAAKEILGWKASTYLPDDLKERYEEYVKIGRDKKDIKFELDDKILEALKAP 382

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.909	0.571	0.840	2.2e-105
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.835	0.563	0.412	3.2e-42
WB|WBGene00018737	342	F53B1.4 [Caenorhabditis elegan	0.760	0.567	0.213	0.00016

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
 Identities = 195/232 (84%), Positives = 208/232 (89%)

Query:    22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
             RPV DWAKSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWAS
Sbjct:   173 RPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWAS 232

Query:    82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
             FRPQYMIGSGNNKDCEEWFFDRIVR R VPIPGSG+Q TNI+HVRDLSSMLT AV NPEA
Sbjct:   233 FRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEA 292

Query:   142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
             AS NIFN VSDRAVTLDGMAKLCA AAG  VEIVHYDPKA G+DAKKAF FRNMHFYAEP
Sbjct:   293 ASGNIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEP 352

Query:   202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPI 253
             RAAKD+LGW S TNLPEDLKERFEEYVKIGRDKK ++FE+DDKILE+LK P+
Sbjct:   353 RAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPV 404

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 90/218 (41%), Positives = 126/218 (57%)

Query:    33 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIG 89
             ++Q+++ SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G
Sbjct:   155 LEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 214

Query:    90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL 149
               N    EEWFF R+   RP+P+P SG+Q + + HV+DL++     + N E AS  IFN+
Sbjct:   215 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGN-EKASREIFNI 273

Query:   150 VSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDIL 208
               ++ VT DG+AK CA+A G P  EIVHY+PK      KKAFPFR+ HF+A    AK +L
Sbjct:   274 SGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 333

Query:   209 GWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKIL 246
             GW+   +L E L + +      G  +K   F  DD IL
Sbjct:   334 GWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

WB|WBGene00018737 F53B1.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
 Identities = 45/211 (21%), Positives = 86/211 (40%)

Query:    32 GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISENF--SNWASFRPQYM 87
             GVK+ + IS+  +Y  +  D  P  E   +          K   E    S W S++  Y+
Sbjct:   128 GVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYV 187

Query:    88 IGSGNNKDCEEWFFDRIVRK--------RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP 139
             +   NN         +++ K        +P P+ G G+   +  +V D S  +T      
Sbjct:   188 MVRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVAL-- 245

Query:   140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYA 199
             E     I+N+ +D  +T   + K+         ++++ +P A         P+ +  +Y 
Sbjct:   246 EGTLGEIYNIGTDFEMTNIELTKMIHFTVS---KLLNREPTAPTFAPIPDRPYHDRRYYI 302

Query:   200 EPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
             +    ++ +GW+ TT   E L +  + YVK+
Sbjct:   303 DFSKIRNAMGWQCTTPFSEGLMKTIDYYVKL 333


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      255       255   0.00085  114 3  11 22  0.45    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  205 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.50u 0.10s 22.60t   Elapsed:  00:00:01
  Total cpu time:  22.50u 0.10s 22.60t   Elapsed:  00:00:01
  Start:  Fri May 10 01:20:21 2013   End:  Fri May 10 01:20:22 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA

GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA

GO:0008831 "dTDP-4-dehydrorhamnose reductase activity" evidence=IEA

GO:0045226 "extracellular polysaccharide biosynthetic process" evidence=IEA

GO:0040017 "positive regulation of locomotion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LYA9	CP41A_ARATH	No assigned EC number	0.8405	0.9098	0.5714	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-156
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	4e-36
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	8e-22
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-12
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	6e-12
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	9e-11
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-08
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-08
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	3e-07
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	6e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-06
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	3e-06
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	1e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-05
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	5e-05
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	5e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	7e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.003
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	0.003
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	0.004

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  439 bits (1132), Expect = e-156
 Identities = 157/234 (67%), Positives = 181/234 (77%), Gaps = 1/234 (0%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
            PVADWAKS G+KQFLF SSAG+YK +DEPPHVEGD VKP AGH++VE Y+ +   NW S
Sbjct: 146 EPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTS 205

Query: 82  FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA 141
           FRPQY+ G GNNKDCEEWFFDR+VR RPVPIPGSG+Q T + HV+DL+SM  L V NP+A
Sbjct: 206 FRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA 265

Query: 142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP 201
           A   IFN+VSDRAVT DGMAK CA+AAG P EIVHYDPKA G  AKKAFPFR+ HF+A P
Sbjct: 266 A-GQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASP 324

Query: 202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 255
           R AK+ LGW    +L EDLK+R+E Y   GRD+K   FE DDKILE L VP+  
Sbjct: 325 RKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKEADFETDDKILEKLGVPVAA 378

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  128 bits (323), Expect = 4e-36
 Identities = 56/160 (35%), Positives = 76/160 (47%), Gaps = 13/160 (8%)

Query: 33  VKQFLFISSAGIYKPADEP-----PHVEGDVVKPD------AGHVQVEKYISENFS-NWA 80
           VKQ++FISSA +Y           P  E D V          G    E  + E  +  + 
Sbjct: 90  VKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYT 149

Query: 81  SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE 140
             RP Y+ G G+      +FFDR+ R RP+ +PG G       HV+DL+  L  A  NP+
Sbjct: 150 IVRPPYIYGPGDYTGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPK 209

Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
           A    IFN+  D AVT D + + CA+A G   EIVH +  
Sbjct: 210 AI-GGIFNITGDEAVTWDELLEACAKALGKEAEIVHVEED 248

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 91.9 bits (228), Expect = 8e-22
 Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 26/230 (11%)

Query: 16  NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD------AGHVQVE 69
            N      + + A+++GVK+F+F SS  +      P  ++ D+  P          +  E
Sbjct: 91  VNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAE 150

Query: 70  KYISENFS----NWASFRPQYMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFT 120
           + +              RP  + G G+  D         +R     +  + I G G Q  
Sbjct: 151 QLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTR 210

Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVEIVHYDP 179
           +  +V D++  L LA+ENP+     +FN+ S    +T+  +A+  A+A G    ++ Y P
Sbjct: 211 DFVYVDDVADALLLALENPDGG---VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIP 267

Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                D +            +   A+  LGW    +L E L +  E  +K
Sbjct: 268 LGRRGDLR-------EGKLLDISKARAALGWEPKVSLEEGLADTLEWLLK 310

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 63.1 bits (154), Expect = 4e-12
 Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 12/137 (8%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNW 79
           + + A+ +GVK+F++ SSA +Y   +  P  E    +P        +  E  +     ++
Sbjct: 64  LLEAARKAGVKRFVYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESY 123

Query: 80  ----ASFRPQYMIGSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML 132
                  R   + G G     +     F  R +  +P+ + G G Q  +  HV D+   +
Sbjct: 124 GLPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAI 183

Query: 133 TLAVENPEAASSNIFNL 149
             A+ENP      ++N+
Sbjct: 184 LHALENP-LEGGGVYNI 199

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 16  NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQ 67
            N      + + A+ +GVK+F+F SS+ +Y    +PP  E   + P         A    
Sbjct: 89  ANVLGTLRLLEAARRAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERL 148

Query: 68  VEKYISENFSNWASFRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPIPGSGMQFTNIA 123
           VE Y           R   + G GN              RI+  +P+ + G G Q  +  
Sbjct: 149 VEAYARAYGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFL 208

Query: 124 HVRDLSSMLTLAVENPEAASSNIFNL 149
           +V D++  + LA+E+P+     I+N+
Sbjct: 209 YVDDVARAILLALEHPDG--GEIYNI 232

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 60.3 bits (147), Expect = 9e-11
 Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 27/214 (12%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN--------- 78
           A+ +GVK+F++ SS+ +Y      P  E     P + +  V KY  E +           
Sbjct: 104 ARKAGVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPY-AVSKYAGELYCQVFARLYGLP 162

Query: 79  WASFRPQYMIGSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT 133
             S R   + G   + +         F +R ++  P  I G G Q  +  +V D+     
Sbjct: 163 TVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANL 222

Query: 134 LAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFR 193
           LA      A   ++N+ + +  +++ +A+L  +  G  +E V+  P+   +         
Sbjct: 223 LAATA--GAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVR-------- 272

Query: 194 NMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
             H  A+   AK +LGW    +  E L+   E +
Sbjct: 273 --HSLADISKAKKLLGWEPKVSFEEGLRLTVEWF 304

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 18/175 (10%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEK 70
             N      V +  +++GVK+ +F SS+ +Y  A   P  E     P     A  +  E 
Sbjct: 92  EENVLATYNVLEAMRANGVKRIVFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEA 151

Query: 71  YISEN-----FSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRP--VPIPGSGMQFTN 121
            IS       F  W  FR   ++G  +        +D I  +++ P  + + G G Q  +
Sbjct: 152 LISAYAHLFGFQAWI-FRFANIVGPRSTHGV---IYDFINKLKRNPNELEVLGDGRQRKS 207

Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH 176
             +V D    + LA E       NIFNL +D  ++++ +A++  +  GL     +
Sbjct: 208 YLYVSDCVDAMLLAWEKSTEG-VNIFNLGNDDTISVNEIAEIVIEELGLKPRFKY 261

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 36/179 (20%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENF 76
           +A  AK +GV++ + IS+ G             D   P         G    E+ + E F
Sbjct: 98  LAKAAKEAGVERLIHISALGA------------DANSPSKYLRSKAEG----EEAVREAF 141

Query: 77  SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKR---PVPIPGSGMQ--FTNIAHVRDLSSM 131
                 RP  + G  +       F +R  +     P P    G Q  F  + +V D++  
Sbjct: 142 PEATIVRPSVVFGREDR------FLNRFAKLLAFLPFPPLIGGGQTKFQPV-YVGDVAEA 194

Query: 132 LTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAF 190
           +  A+++PE      + LV  +  TL  + +L  +  G    ++      A + A+   
Sbjct: 195 IARALKDPETEGK-TYELVGPKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKL 252

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
           V D AK +GV+ F+F S   + K     PH +    K      +VE+YI  +       R
Sbjct: 90  VVDAAKRAGVQHFVFSSVPDVEKLTLAVPHFDS---K-----AEVEEYIRASGLPATILR 141

Query: 84  PQ-YMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGM-QFTNIAHVRDLSSMLTLAVENPE 140
           P  +M     N         ++      + +P     +   I  V D+   +    ++P 
Sbjct: 142 PAFFM----EN-FLTPPAPQKMEDGTLTLVLPLDPDTKLPMID-VADIGPAVAAIFKDPA 195

Query: 141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE 173
             +     L  D  +T + +A   ++  G PV 
Sbjct: 196 KFNGKTIELAGDE-LTPEEIAAAFSKVLGKPVT 227

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 49.2 bits (118), Expect = 6e-07
 Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 35/211 (16%)

Query: 30  SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGH----VQVEKYI----SENFSNWA 80
           ++G+ + +F SS G +Y   ++ P  E D   P + +    + +EKY+         ++ 
Sbjct: 102 AAGIGKIIFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYT 161

Query: 81  SFRPQYMIGSGNNKDCEEW----FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
             R     G G   D ++       ++I+R  P+ I G G    +  ++ DL   L   +
Sbjct: 162 VLRISNPYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALL 221

Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-----DAKKAFP 191
            +       +FN+ S    +L  +     +  G  V++++   +   +     D  +   
Sbjct: 222 RS--KGLEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPARTTDVPKIVLDISR--- 276

Query: 192 FRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
                       A+  LGW    +L + L++
Sbjct: 277 ------------ARAELGWSPKISLEDGLEK 295

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 50/229 (21%), Positives = 78/229 (34%), Gaps = 40/229 (17%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKP-ADEP-PHVEGDVVKPDAGH------VQVEKYIS 73
           + V D   ++GV + +  SS  +Y    D P P  E   ++            +VE+ ++
Sbjct: 91  QNVLDACAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLA 150

Query: 74  ENFS-----NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL 128
           E        N    RP  ++G G         F    R           QF    H  D+
Sbjct: 151 EFRRRHPELNVTVLRPATILGPGT--RNTTRDFLSPRRLPVPGGFDPPFQFL---HEDDV 205

Query: 129 SSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
           +  L LAV    A ++ IFN+  D  V L  +  L       PV +    P  A + A +
Sbjct: 206 ARALVLAV---RAGATGIFNVAGDGPVPLSLVLALL---GRRPVPLPS--PLPAALAAAR 257

Query: 189 AFPFRN-----MHFYAEP-----RAAKDILGWRSTTNLPEDLKERFEEY 227
               R      + F   P       A+  LGW+          E   ++
Sbjct: 258 RLGLRPLPPEQLDFLQYPPVMDTTRARVELGWQPK----HTSAEVLRDF 302

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 46/226 (20%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-------PDAGH--VQVEKYISENFSN 78
           A+ +GV++FLF SSA +Y P  +   +E  VV+       P         EK  +E    
Sbjct: 103 ARINGVERFLFASSACVY-PEFK--QLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQ 159

Query: 79  WASFRPQYMIGSGNNK------DCEEWFFDR------IVRK-------RPVPIPGSGMQF 119
              +   Y I +   +          W   R      + RK           I G G+Q 
Sbjct: 160 --HYNEDYGIETRIVRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQT 217

Query: 120 TNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDP 179
            +  ++ D    L   +E+         NL SD  V+++ +A++    +G P+EI+H+ P
Sbjct: 218 RSFTYIDDCVEGLRRLMESDFGEP---VNLGSDEMVSMNELAEMVLSFSGKPLEIIHHTP 274

Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
              G+              ++    K+ LGW   T L E L+  + 
Sbjct: 275 GPQGVR----------GRNSDNTLLKEELGWEPNTPLEEGLRITYF 310

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 51/168 (30%)

Query: 27  WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQY 86
            A+   V++ +++SS G+Y                D     V++    N S       + 
Sbjct: 87  LAQLPAVQRVIYLSSTGVY---------------GDQQGEWVDETSPPNPST---ESGRA 128

Query: 87  MIGSGNNKDCEEWF-----------------------FDRIVRKRPVPIPGSGMQFTNIA 123
           ++      + E+                           R+ +    P  G+    TN  
Sbjct: 129 LL------EAEQALLALGSKPTTILRLAGIYGPGRHPLRRLAQGTGRPPAGN--APTNRI 180

Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
           HV DL   L  A++ P      ++N+V D  VT     +  A+  GLP
Sbjct: 181 HVDDLVGALAFALQRPAP--GPVYNVVDDLPVTRGEFYQAAAELLGLP 226

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 19/158 (12%)

Query: 19  RLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 78
           +  +   D AK +GVK  +++S++G     D P  +  D       H   EKY+  +   
Sbjct: 79  QQHKNFIDAAKQAGVKHIVYLSASGA--DEDSPFLLARD-------HGATEKYLEASGIP 129

Query: 79  WASFRP-QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
           +   RP  +M       D    F   I+ +  +  P  G         RD++     A+ 
Sbjct: 130 YTILRPGWFM-------DNLLEFLPSILEEGTIYGPA-GDGKVAFVDRRDIAEAAAAALT 181

Query: 138 NPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
            P      ++NL    A++   +A + ++A G PV  V
Sbjct: 182 EPGHE-GKVYNLTGPEALSYAELAAILSEALGKPVRYV 218

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 99  WFFDRIVRKRPVPIPGSG-MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR--AV 155
           +F    V  +P+ I G G  Q  ++ H  DL ++     +NP+     +FN+   R  +V
Sbjct: 216 YFLKCAVTGKPLTIFGYGGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSV 275

Query: 156 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFY-AEPRAAKDILGWRSTT 214
           +L  +  LC +  G  +E    D    G          +  +Y ++ R  K+  GW+   
Sbjct: 276 SLLELIALCEEITGRKMESY-KDENRPG----------DQIWYISDIRKIKEKPGWKPER 324

Query: 215 NLPEDLKE 222
           +  E L E
Sbjct: 325 DPREILAE 332

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 60/248 (24%), Positives = 95/248 (38%), Gaps = 62/248 (25%)

Query: 16  NNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADE------PPHV--EGDVVKPD 62
           +N  +   V   A   GVK+ +F+ S+ IY     +P DE      PP    EG  +   
Sbjct: 78  DNLLINDNVIHAAHRFGVKKLVFLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIAKR 137

Query: 63  AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD--------RIVRK------- 107
           AG    E Y  +   ++ S  P  + G  +N       FD         ++RK       
Sbjct: 138 AGLKLCEAYRKQYGCDYISVMPTNLYGPHDN-------FDPENSHVIPALIRKFHEAKLR 190

Query: 108 --RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA 165
             + V + GSG       +  DL+  +   +EN +     I N+ S   +++  +A+  A
Sbjct: 191 GGKEVTVWGSGTPRREFLYSDDLARAIVFLLENYD--EPIIVNVGSGVEISIRELAEAIA 248

Query: 166 QAAGLPVEIVHYDP-KAAGIDAKKAFPFRNMHFYAEPRAAKDI-----LGWRSTTNLPED 219
           +  G   EIV +D  K  G                 PR   D+     LGW   T L + 
Sbjct: 249 EVVGFKGEIV-FDTSKPDGQ----------------PRKLLDVSKLRALGWFPFTPLEQG 291

Query: 220 LKERFEEY 227
           ++E +E Y
Sbjct: 292 IRETYEWY 299

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 13/124 (10%)

Query: 102 DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA 161
                K      G G       H  D + +  LA+E  +A S  +++ V++  + +  +A
Sbjct: 176 AIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGS--VYHAVAEEGIPVKDIA 233

Query: 162 KLCAQAAGLPVEIVHYDPKAAGIDAKKAF----PFRNMHFYAEPRAAKDILGWRST-TNL 216
           +   +  G+PV  +  +      +A   F     F  +      +  +  LGW+    +L
Sbjct: 234 EAIGRRLGVPVVSIPAE------EAAAHFGWLAMFVALDQPVSSQKTRRRLGWKPQQPSL 287

Query: 217 PEDL 220
            EDL
Sbjct: 288 LEDL 291

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 114 GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA----AG 169
           GSG Q+ +  H+ DL  ++  A+ENP+   S   N V+   VT     K   +A    AG
Sbjct: 188 GSGRQWMSWIHIDDLVRLIEFAIENPD--LSGPVNAVAPNPVTNAEFTKALGRALHRPAG 245

Query: 170 LPV 172
           LPV
Sbjct: 246 LPV 248

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 25/124 (20%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEP-----PHVEGDVVKPDAGHVQVEKYISE-NFS 77
           +A  AK++GV+ FL +SS G    AD         V+G          +VE+ + +  F 
Sbjct: 97  LAKLAKAAGVQHFLLVSSLG----ADPKSSFLYLKVKG----------EVERDLQKLGFE 142

Query: 78  NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS-SMLTLAV 136
               FRP  ++G        E    +++R     +   G           ++ +M+  A+
Sbjct: 143 RLTIFRPGLLLGERQESRPGERLAQKLLR----ILSPLGFPKYKPIPAETVAKAMVKAAL 198

Query: 137 ENPE 140
           +   
Sbjct: 199 KESS 202

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 59/246 (23%), Positives = 94/246 (38%), Gaps = 37/246 (15%)

Query: 7   KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADE------PPHV- 54
            + A F   N  ++Q  V D A   GVK+ LF+ S+ IY     +P  E      PP   
Sbjct: 68  TYPADFIREN-LQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPT 126

Query: 55  -EGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---------FFDRI 104
            E   +   AG    + Y  +   +  S  P  + G  +N   E           F +  
Sbjct: 127 NEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAK 186

Query: 105 VRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL 163
               P V + GSG       HV DL+  +   +     A     N+ S   VT+  +A+L
Sbjct: 187 ANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAEH--VNVGSGDEVTIKELAEL 244

Query: 164 CAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER 223
             +  G   E+V    K  G         R +   ++ R+    LGW    +L + L+E 
Sbjct: 245 VKEVVGFEGELVWDTSKPDGT-------PRKLMDSSKLRS----LGWDPKFSLKDGLQET 293

Query: 224 FEEYVK 229
           ++ Y++
Sbjct: 294 YKWYLE 299

Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
PLN00016	378	RNA-binding protein; Provisional	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.98
PLN02206	442	UDP-glucuronate decarboxylase	99.97
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.97
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.97
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.97
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.97
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.97
PLN02427	386	UDP-apiose/xylose synthase	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PLN02572	442	UDP-sulfoquinovose synthase	99.96
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.96
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PLN02653	340	GDP-mannose 4,6-dehydratase	99.96
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.96
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.95
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.95
PLN02214	342	cinnamoyl-CoA reductase	99.95
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.94
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.94
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.94
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.94
PLN00198	338	anthocyanidin reductase; Provisional	99.93
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.93
PLN02650	351	dihydroflavonol-4-reductase	99.93
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.93
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.93
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.93
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.93
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.92
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.91
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.9
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.89
PRK05865	854	hypothetical protein; Provisional	99.88
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.87
PLN02686	367	cinnamoyl-CoA reductase	99.87
CHL00194	317	ycf39 Ycf39; Provisional	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.85
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.85
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.85
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.82
PRK07201	657	short chain dehydrogenase; Provisional	99.81
PLN02778	298	3,5-epimerase/4-reductase	99.79
PLN02996	491	fatty acyl-CoA reductase	99.78
PLN02583	297	cinnamoyl-CoA reductase	99.72
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.71
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.7
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.69
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.66
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.66
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.64
PLN02260	668	probable rhamnose biosynthetic enzyme	99.63
PRK12320	699	hypothetical protein; Provisional	99.61
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.5
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.47
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.46
PLN02503	605	fatty acyl-CoA reductase 2	99.44
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.41
KOG2774	366	consensus NAD dependent epimerase [General functio	99.36
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.28
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.27
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.24
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.06
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.04
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.81
PRK06482	276	short chain dehydrogenase; Provisional	98.8
PLN03209	576	translocon at the inner envelope of chloroplast su	98.78
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.75
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.64
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.64
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.63
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.5
PRK09135	249	pteridine reductase; Provisional	98.49
PRK07074	257	short chain dehydrogenase; Provisional	98.48
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.46
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.44
PRK05875	276	short chain dehydrogenase; Provisional	98.4
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.35
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.34
PRK08263	275	short chain dehydrogenase; Provisional	98.31
PRK12828	239	short chain dehydrogenase; Provisional	98.26
PRK07067	257	sorbitol dehydrogenase; Provisional	98.26
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.25
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.22
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.22
PRK07774	250	short chain dehydrogenase; Provisional	98.21
PRK07775	274	short chain dehydrogenase; Provisional	98.17
PRK06914	280	short chain dehydrogenase; Provisional	98.13
PRK06123	248	short chain dehydrogenase; Provisional	98.08
PRK12746	254	short chain dehydrogenase; Provisional	98.04
PRK06128	300	oxidoreductase; Provisional	98.04
PRK07060	245	short chain dehydrogenase; Provisional	98.03
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.02
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.02
PRK12827	249	short chain dehydrogenase; Provisional	98.01
PRK07806	248	short chain dehydrogenase; Provisional	97.99
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.99
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.98
PRK08324	681	short chain dehydrogenase; Validated	97.97
PRK12829	264	short chain dehydrogenase; Provisional	97.93
PRK09186	256	flagellin modification protein A; Provisional	97.91
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.91
PRK06180	277	short chain dehydrogenase; Provisional	97.91
PRK05876	275	short chain dehydrogenase; Provisional	97.9
PRK06138	252	short chain dehydrogenase; Provisional	97.88
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.87
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	97.84
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.84
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	97.83
PRK06701	290	short chain dehydrogenase; Provisional	97.82
PRK06194	287	hypothetical protein; Provisional	97.79
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.78
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.68
PRK07577	234	short chain dehydrogenase; Provisional	97.67
PRK12939	250	short chain dehydrogenase; Provisional	97.66
PRK06182	273	short chain dehydrogenase; Validated	97.64
PRK06500	249	short chain dehydrogenase; Provisional	97.62
PRK07985	294	oxidoreductase; Provisional	97.59
PRK12824	245	acetoacetyl-CoA reductase; Provisional	97.59
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	97.58
PRK12937	245	short chain dehydrogenase; Provisional	97.57
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.57
PRK07890	258	short chain dehydrogenase; Provisional	97.53
PRK07069	251	short chain dehydrogenase; Validated	97.53
PRK08017	256	oxidoreductase; Provisional	97.5
PRK06841	255	short chain dehydrogenase; Provisional	97.46
PRK06181	263	short chain dehydrogenase; Provisional	97.45
PRK08219	227	short chain dehydrogenase; Provisional	97.45
PRK07041	230	short chain dehydrogenase; Provisional	97.44
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.4
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.4
PLN02253	280	xanthoxin dehydrogenase	97.39
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.38
PRK12747	252	short chain dehydrogenase; Provisional	97.37
PRK09242	257	tropinone reductase; Provisional	97.31
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.29
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.29
PRK06523	260	short chain dehydrogenase; Provisional	97.25
PRK05717	255	oxidoreductase; Validated	97.23
PRK09134	258	short chain dehydrogenase; Provisional	97.23
PRK08628	258	short chain dehydrogenase; Provisional	97.19
PRK07326	237	short chain dehydrogenase; Provisional	97.19
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.17
PRK10538	248	malonic semialdehyde reductase; Provisional	97.13
PRK06114	254	short chain dehydrogenase; Provisional	97.11
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.07
PRK12744	257	short chain dehydrogenase; Provisional	97.07
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.07
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.06
PRK06949	258	short chain dehydrogenase; Provisional	97.04
PRK12743	256	oxidoreductase; Provisional	97.03
PRK05650	270	short chain dehydrogenase; Provisional	97.02
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.01
PRK07825	273	short chain dehydrogenase; Provisional	96.97
PRK06198	260	short chain dehydrogenase; Provisional	96.95
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.93
PRK07109	334	short chain dehydrogenase; Provisional	96.93
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.9
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.87
PRK06179	270	short chain dehydrogenase; Provisional	96.87
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.85
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	96.83
PRK06196	315	oxidoreductase; Provisional	96.77
PRK08339	263	short chain dehydrogenase; Provisional	96.76
PRK07454	241	short chain dehydrogenase; Provisional	96.75
PRK07024	257	short chain dehydrogenase; Provisional	96.68
PRK09291	257	short chain dehydrogenase; Provisional	96.68
PRK08264	238	short chain dehydrogenase; Validated	96.66
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.66
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.65
PRK07856	252	short chain dehydrogenase; Provisional	96.63
PRK06057	255	short chain dehydrogenase; Provisional	96.59
PRK07677	252	short chain dehydrogenase; Provisional	96.56
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.55
PRK07478	254	short chain dehydrogenase; Provisional	96.53
PRK07814	263	short chain dehydrogenase; Provisional	96.43
PRK05993	277	short chain dehydrogenase; Provisional	96.41
PRK06398	258	aldose dehydrogenase; Validated	96.39
PRK06101	240	short chain dehydrogenase; Provisional	96.38
PRK12742	237	oxidoreductase; Provisional	96.37
PRK07035	252	short chain dehydrogenase; Provisional	96.36
COG2910	211	Putative NADH-flavin reductase [General function p	96.29
PRK06484	520	short chain dehydrogenase; Validated	96.24
PRK08643	256	acetoin reductase; Validated	96.22
PRK08226	263	short chain dehydrogenase; Provisional	96.12
PRK05872	296	short chain dehydrogenase; Provisional	96.1
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.09
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.04
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.02
PRK08265	261	short chain dehydrogenase; Provisional	95.99
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.96
PRK07831	262	short chain dehydrogenase; Provisional	95.96
PRK07063	260	short chain dehydrogenase; Provisional	95.93
PRK08589	272	short chain dehydrogenase; Validated	95.92
PRK07576	264	short chain dehydrogenase; Provisional	95.81
PRK08251	248	short chain dehydrogenase; Provisional	95.79
PRK07904	253	short chain dehydrogenase; Provisional	95.79
PRK07578	199	short chain dehydrogenase; Provisional	95.71
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.68
PRK06172	253	short chain dehydrogenase; Provisional	95.68
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.64
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.63
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.52
PRK07102	243	short chain dehydrogenase; Provisional	95.51
PRK06924	251	short chain dehydrogenase; Provisional	95.51
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.5
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.47
PRK07062	265	short chain dehydrogenase; Provisional	95.46
PRK07832	272	short chain dehydrogenase; Provisional	95.44
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	95.41
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	95.2
PRK06139	330	short chain dehydrogenase; Provisional	95.08
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.06
PRK08267	260	short chain dehydrogenase; Provisional	95.04
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.0
PRK06483	236	dihydromonapterin reductase; Provisional	94.97
PRK06197	306	short chain dehydrogenase; Provisional	94.86
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.85
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.72
PRK08703	239	short chain dehydrogenase; Provisional	94.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.66
PRK05693	274	short chain dehydrogenase; Provisional	94.62
PRK05867	253	short chain dehydrogenase; Provisional	94.53
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	94.34
PRK05866	293	short chain dehydrogenase; Provisional	94.34
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.33
PRK07201	657	short chain dehydrogenase; Provisional	94.27
PRK07023	243	short chain dehydrogenase; Provisional	94.19
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.1
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	94.06
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	93.95
PRK06953	222	short chain dehydrogenase; Provisional	93.95
PRK06125	259	short chain dehydrogenase; Provisional	93.81
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	93.79
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.64
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	93.58
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	93.55
PRK07791	286	short chain dehydrogenase; Provisional	93.54
PRK09072	263	short chain dehydrogenase; Provisional	93.25
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	93.01
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.94
PRK08340	259	glucose-1-dehydrogenase; Provisional	92.67
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	92.66
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	92.49
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	92.31
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	92.17
PRK05855	582	short chain dehydrogenase; Validated	92.08
PRK06484	520	short chain dehydrogenase; Validated	91.67
PLN02780	320	ketoreductase/ oxidoreductase	91.25
PRK06940	275	short chain dehydrogenase; Provisional	90.97
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	90.97
PRK08278	273	short chain dehydrogenase; Provisional	90.66
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	90.06
PRK05884	223	short chain dehydrogenase; Provisional	89.64
PRK05854	313	short chain dehydrogenase; Provisional	89.26
PLN00015	308	protochlorophyllide reductase	87.98
COG0300	265	DltE Short-chain dehydrogenases of various substra	85.57
PRK09009	235	C factor cell-cell signaling protein; Provisional	85.48
KOG1208	314	consensus Dehydrogenases with different specificit	84.36
PRK05599	246	hypothetical protein; Provisional	84.22
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	83.7
KOG0725	270	consensus Reductases with broad range of substrate	83.34
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	82.58
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	82.35
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	82.04
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	81.34
PRK08177	225	short chain dehydrogenase; Provisional	80.19

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1.6e-37  Score=264.16  Aligned_cols=249  Identities=64%  Similarity=1.120  Sum_probs=211.3

Q ss_pred             cccceEEecc-cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEec
Q 025270            6 AKFKALFRTN-NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP   84 (255)
Q Consensus         6 ~~~d~~~~~~-~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp   84 (255)
                      ..+|.+++.+ .+..++.+++++|+++|++||||+||.++|+.....+..|+.+..|..+|..+|+++.+.+++++++||
T Consensus       129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilRp  208 (378)
T PLN00016        129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRP  208 (378)
T ss_pred             CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEec
Confidence            4678888887 667789999999999999999999999999976666778887776666788999999999999999999


Q ss_pred             CcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHH
Q 025270           85 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC  164 (255)
Q Consensus        85 ~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i  164 (255)
                      +++||++.......+++..+..+.++.++++|.+.++|+|++|+|+++..+++++... +++||+++++.+|+.|+++.+
T Consensus       209 ~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~-~~~yni~~~~~~s~~el~~~i  287 (378)
T PLN00016        209 QYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAA-GQIFNIVSDRAVTFDGMAKAC  287 (378)
T ss_pred             eeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcccc-CCEEEecCCCccCHHHHHHHH
Confidence            9999998665556677888888888888888899999999999999999999986544 589999999999999999999


Q ss_pred             HHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhccccccccchhhHH
Q 025270          165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK  244 (255)
Q Consensus       165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  244 (255)
                      .+.+|.+.++...++........+..++.......|++|++++|||+|.++++++|.++++|+++++..+++++|+.||+
T Consensus       288 ~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~~~~~~~~~~  367 (378)
T PLN00016        288 AKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKEADFETDDK  367 (378)
T ss_pred             HHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCccccCccccHH
Confidence            99999987665544433222222233444455667999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 025270          245 ILESLKVPIPV  255 (255)
Q Consensus       245 ~~~~~~~~~~~  255 (255)
                      ||++++.|.++
T Consensus       368 ~~~~~~~~~~~  378 (378)
T PLN00016        368 ILEKLGVPVAA  378 (378)
T ss_pred             HHHHhcCCCCC
Confidence            99999988753

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.5e-36  Score=237.23  Aligned_cols=215  Identities=15%  Similarity=0.173  Sum_probs=188.8

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHhhCCc-ceEEEeccccccCCCCC--CCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAKSSGV-KQFLFISSAGIYKPADE--PPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~--~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      |.|-..|+..++.|  +.||.+||+++++... -||+|+||-.|||.-..  ..++|+++.+|. |+|+++|+...    
T Consensus        88 DRSI~~P~~Fi~TN--v~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps-SPYSASKAasD~lVr  164 (340)
T COG1088          88 DRSIDGPAPFIQTN--VVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS-SPYSASKAASDLLVR  164 (340)
T ss_pred             cccccChhhhhhcc--hHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCC-CCcchhhhhHHHHHH
Confidence            44556677778888  9999999999999875 38999999999997543  369999999985 89998887543    


Q ss_pred             -----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                           +|++++|.|+++-|||.+.+. ++|.++.+++.|.+++++|+|.+.+||+||+|-|+++..++++...  |++||
T Consensus       165 ay~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~--GE~YN  242 (340)
T COG1088         165 AYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI--GETYN  242 (340)
T ss_pred             HHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC--CceEE
Confidence                 499999999999999998886 8999999999999999999999999999999999999999999877  79999


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCe-----eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGLPVE-----IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER  223 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~  223 (255)
                      |+++...+..|+++.|.+.+|+..+     +..+.....          ....+.+|.+|+.++|||.|.++|++||+++
T Consensus       243 Igg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpG----------HD~RYaid~~Ki~~eLgW~P~~~fe~GlrkT  312 (340)
T COG1088         243 IGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPG----------HDRRYAIDASKIKRELGWRPQETFETGLRKT  312 (340)
T ss_pred             eCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCC----------CccceeechHHHhhhcCCCcCCCHHHHHHHH
Confidence            9999999999999999999998776     444444332          2377899999999999999999999999999


Q ss_pred             HHHHHHhc
Q 025270          224 FEEYVKIG  231 (255)
Q Consensus       224 ~~~~~~~~  231 (255)
                      ++||.++.
T Consensus       313 v~WY~~N~  320 (340)
T COG1088         313 VDWYLDNE  320 (340)
T ss_pred             HHHHHhch
Confidence            99999875

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-33  Score=219.37  Aligned_cols=208  Identities=22%  Similarity=0.325  Sum_probs=176.5

Q ss_pred             CcccHHHHHHHHhhC-CcceEEEeccccccCCCCCCCCC-CCCCCCCCCChhHHHHHHHhh---------CCceEEEecC
Q 025270           17 NFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV-EGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~~~~~~~-E~~~~~~~~~~y~~ek~~~e~---------~~~~~ilRp~   85 (255)
                      |+.++..|+++++.. ++++|||+||..|||+..+.... |.+.++|. ++|+++|+++|.         +++++++|.+
T Consensus       107 nil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPt-npyAasKaAaE~~v~Sy~~sy~lpvv~~R~n  185 (331)
T KOG0747|consen  107 NILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPT-NPYAASKAAAEMLVRSYGRSYGLPVVTTRMN  185 (331)
T ss_pred             CchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCC-CchHHHHHHHHHHHHHHhhccCCcEEEEecc
Confidence            599999999999998 69999999999999998765555 88888875 899999988774         8999999999


Q ss_pred             cccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHH
Q 025270           86 YMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC  164 (255)
Q Consensus        86 ~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i  164 (255)
                      +||||++... .++.|+.....+.+.++.|+|.+.++|+|++|+++++..++++...  |++|||++...++..|+++.+
T Consensus       186 nVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~--geIYNIgtd~e~~~~~l~k~i  263 (331)
T KOG0747|consen  186 NVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGEL--GEIYNIGTDDEMRVIDLAKDI  263 (331)
T ss_pred             CccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCc--cceeeccCcchhhHHHHHHHH
Confidence            9999998775 7888888888899999999999999999999999999999999554  799999999999999999999


Q ss_pred             HHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+.+++...-...++...   .-...|.....+.++.+|++ .|||+|.+++++||+.+++|+.++.
T Consensus       264 ~eli~~~~~~~~~~p~~~---~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p~~eGLrktie~y~~~~  326 (331)
T KOG0747|consen  264 CELFEKRLPNIDTEPFIF---FVEDRPYNDLRYFLDDEKIK-KLGWRPTTPWEEGLRKTIEWYTKNF  326 (331)
T ss_pred             HHHHHHhccCCCCCCcce---ecCCCCcccccccccHHHHH-hcCCcccCcHHHHHHHHHHHHHhhh
Confidence            999987655322222211   11223333466889999999 7999999999999999999998875

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4e-33  Score=218.97  Aligned_cols=210  Identities=21%  Similarity=0.263  Sum_probs=172.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CC
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FS   77 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~   77 (255)
                      +|-..++.|  +.||.+|+++|+++||++|||.||++|||.+...|++|+++..|. ++|+.+|++.|.         ++
T Consensus        86 ~Pl~Yy~NN--v~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~-NPYG~sKlm~E~iL~d~~~a~~~  162 (329)
T COG1087          86 NPLKYYDNN--VVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPI-NPYGRSKLMSEEILRDAAKANPF  162 (329)
T ss_pred             CHHHHHhhc--hHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCC-CcchhHHHHHHHHHHHHHHhCCC
Confidence            344445555  999999999999999999999999999999999999999998864 778877776654         89


Q ss_pred             ceEEEecCcccCCCCCC----------CcHHHHHHHHHcCCC-eeccCC------CCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           78 NWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRP-VPIPGS------GMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~~-~~i~~~------~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      ++++||.+++.|....+          ..++..++.++..++ +.++|+      |...||||||.|+|++++.+++.-.
T Consensus       163 ~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~  242 (329)
T COG1087         163 KVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLK  242 (329)
T ss_pred             cEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHH
Confidence            99999999998854221          145555555554433 677774      6677999999999999999998655


Q ss_pred             cCC-CCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHH
Q 025270          141 AAS-SNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPE  218 (255)
Q Consensus       141 ~~~-~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~  218 (255)
                      ... ..+||++.|...|+.|+++.+.++.|.+.+....+.....+          ..+..|.+|+++.|||+|.+ ++++
T Consensus       243 ~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDp----------a~l~Ad~~kA~~~Lgw~p~~~~L~~  312 (329)
T COG1087         243 EGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDP----------AILVADSSKARQILGWQPTYDDLED  312 (329)
T ss_pred             hCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCC----------ceeEeCHHHHHHHhCCCcccCCHHH
Confidence            421 15999999999999999999999999998887766554433          67899999999999999999 9999


Q ss_pred             HHHHHHHHHHH
Q 025270          219 DLKERFEEYVK  229 (255)
Q Consensus       219 ~i~~~~~~~~~  229 (255)
                      .++....|...
T Consensus       313 ii~~aw~W~~~  323 (329)
T COG1087         313 IIKDAWDWHQQ  323 (329)
T ss_pred             HHHHHHHHhhh
Confidence            99999999985

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=6e-33  Score=233.75  Aligned_cols=214  Identities=16%  Similarity=0.202  Sum_probs=165.0

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEE
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      .++.|  +.|+.||+++|++.++++|||+||.++||.....+..|+++..|. +.|+.+|...|         +++++++
T Consensus       113 ~~~~N--v~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~  189 (348)
T PRK15181        113 TNSAN--IDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPL-SPYAVTKYVNELYADVFARSYEFNAIG  189 (348)
T ss_pred             HHHHH--HHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCC-ChhhHHHHHHHHHHHHHHHHhCCCEEE
Confidence            34445  999999999999999999999999999997655667777665543 56776665544         2899999


Q ss_pred             EecCcccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCcc
Q 025270           82 FRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  155 (255)
Q Consensus        82 lRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~  155 (255)
                      +||++||||+.+.     .+++.++.++..|+++.++++|.+.++|+|++|+|++++.++..... ..+++||+++++.+
T Consensus       190 lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        190 LRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             EEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence            9999999997643     25778888888888888889999999999999999999988764321 23589999999999


Q ss_pred             CHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          156 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      |++|+++.+.+.++....... ... .  ......+.......+|++|+++.|||.|+++++++|+++++|++.+.
T Consensus       270 s~~e~~~~i~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~~  341 (348)
T PRK15181        270 SLNELYYLIRDGLNLWRNEQS-RAE-P--IYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKH  341 (348)
T ss_pred             eHHHHHHHHHHHhCccccccc-CCC-c--ccCCCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence            999999999999874211100 000 0  00001111224567899999999999999999999999999998764

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.98  E-value=3e-31  Score=228.09  Aligned_cols=200  Identities=21%  Similarity=0.203  Sum_probs=164.0

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC-----CCCCCCChhHHHHHHHh---------hCCceEEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGHVQVEKYISE---------NFSNWASF   82 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~~y~~ek~~~e---------~~~~~~il   82 (255)
                      |+.++.+|+++|+++++ +|||+||.+|||.....+.+|+.     +..+ .+.|+.+|...|         .+++++++
T Consensus       211 Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p-~s~Yg~SK~~aE~~~~~y~~~~~l~~~il  288 (436)
T PLN02166        211 NVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE-RSCYDEGKRTAETLAMDYHRGAGVEVRIA  288 (436)
T ss_pred             HHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCC-CCchHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            39999999999999986 89999999999976556777764     3322 245665555443         27999999


Q ss_pred             ecCcccCCCCC---CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           83 RPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        83 Rp~~v~G~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      ||++|||++..   ...++.++.++..+.++.+++++.+.++|+|++|+|+++..+++...   +++||+++++.+|++|
T Consensus       289 R~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~---~giyNIgs~~~~Si~e  365 (436)
T PLN02166        289 RIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH---VGPFNLGNPGEFTMLE  365 (436)
T ss_pred             EEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CceEEeCCCCcEeHHH
Confidence            99999999754   23677889999999988888999999999999999999999998543   3799999999999999


Q ss_pred             HHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      +++.+.+.+|.+.++...+.....          ......|++|++++|||+|+++++++|+++++|++++-
T Consensus       366 la~~I~~~~g~~~~i~~~p~~~~~----------~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~~  427 (436)
T PLN02166        366 LAEVVKETIDSSATIEFKPNTADD----------PHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNRI  427 (436)
T ss_pred             HHHHHHHHhCCCCCeeeCCCCCCC----------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHh
Confidence            999999999987766555433222          14567899999999999999999999999999998754

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.97  E-value=2.8e-30  Score=222.48  Aligned_cols=203  Identities=21%  Similarity=0.229  Sum_probs=162.8

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC-----CCCCCCChhHHHHHHHh---------hC
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGHVQVEKYISE---------NF   76 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~~y~~ek~~~e---------~~   76 (255)
                      .++.|  +.++.+|+++|++.++ +|||+||..+|+.....+..|+.     +..+ .+.|+..|...|         ++
T Consensus       206 ~~~~N--v~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~-~s~Y~~SK~~aE~~~~~y~~~~g  281 (442)
T PLN02206        206 TIKTN--VVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGAN  281 (442)
T ss_pred             HHHHH--HHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCc-cchHHHHHHHHHHHHHHHHHHhC
Confidence            33444  8999999999999997 89999999999876555677764     2221 244555554433         37


Q ss_pred             CceEEEecCcccCCCCC---CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           77 SNWASFRPQYMIGSGNN---KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      ++++++||+++|||+..   ...+..++.++..++++.++++|++.++|+|++|+|++++.++++..   +++||+++++
T Consensus       282 ~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~---~g~yNIgs~~  358 (442)
T PLN02206        282 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH---VGPFNLGNPG  358 (442)
T ss_pred             CCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC---CceEEEcCCC
Confidence            99999999999999743   23567788888888888888999999999999999999999998653   4799999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      .+|++|+++.+++.+|.+..+...+.....          .....+|++|++++|||.|+++++++|+++++|+++.
T Consensus       359 ~~sl~Elae~i~~~~g~~~~i~~~p~~~~~----------~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~  425 (442)
T PLN02206        359 EFTMLELAKVVQETIDPNAKIEFRPNTEDD----------PHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR  425 (442)
T ss_pred             ceeHHHHHHHHHHHhCCCCceeeCCCCCCC----------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999977666554433221          1445789999999999999999999999999999765

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.97  E-value=1.2e-29  Score=197.02  Aligned_cols=208  Identities=20%  Similarity=0.178  Sum_probs=174.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC----CCCChhHHHHHHHh-----h--
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAGHVQVEKYISE-----N--   75 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~----~~~~~y~~ek~~~e-----~--   75 (255)
                      ++-.++..|  +.++.+++-.|++-+ +||+++||+.|||++..-|..|+....    .+++-|...|.+.|     +  
T Consensus       110 npvktIktN--~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k  186 (350)
T KOG1429|consen  110 NPVKTIKTN--VIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHK  186 (350)
T ss_pred             Cccceeeec--chhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhc
Confidence            344556666  999999999999988 699999999999997666666665321    12344555554444     3  


Q ss_pred             --CCceEEEecCcccCCCCCCC---cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           76 --FSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        76 --~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                        |+++.|.|+.+.|||..+-.   .+..|+.+.+++.++.++|+|.+.++|.|++|++++++++++.+..   +-||++
T Consensus       187 ~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~---~pvNiG  263 (350)
T KOG1429|consen  187 QEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR---GPVNIG  263 (350)
T ss_pred             ccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc---CCcccC
Confidence              89999999999999975543   6788999999999999999999999999999999999999998876   569999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          151 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       151 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      +++.+|+.|+++++.+..|-...+....+..++.          .....|++++++.|||.|.+++++++..++.|++++
T Consensus       264 np~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp----------~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~  333 (350)
T KOG1429|consen  264 NPGEFTMLELAEMVKELIGPVSEIEFVENGPDDP----------RKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRER  333 (350)
T ss_pred             CccceeHHHHHHHHHHHcCCCcceeecCCCCCCc----------cccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHH
Confidence            9999999999999999998777777766665553          667889999999999999999999999999999886

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.97  E-value=4.4e-30  Score=217.12  Aligned_cols=219  Identities=13%  Similarity=0.099  Sum_probs=166.0

Q ss_pred             cceEEecccCcccHHHHHHHHhh---------CCcceEEEeccccccCCCC--CCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS---------SGVKQFLFISSAGIYKPAD--EPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~---------~~v~r~i~~Ss~~vy~~~~--~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      ++..++.|  +.++.+++++|++         .++++||++||.++|+...  ..+++|+.+..|. +.|+.+|...|  
T Consensus        94 ~~~~~~~N--~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~-s~Y~~sK~~~e~~  170 (355)
T PRK10217         94 PAAFIETN--IVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS-SPYSASKASSDHL  170 (355)
T ss_pred             hHHHHHHh--hHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC-ChhHHHHHHHHHH
Confidence            34455555  9999999999986         3578999999999998642  3467888776553 66776665533  


Q ss_pred             -------hCCceEEEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  146 (255)
                             .+++++++||++||||+... .+++.++.++..+.++.++++|++.++|+|++|+|++++.+++....  +++
T Consensus       171 ~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~--~~~  248 (355)
T PRK10217        171 VRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKV--GET  248 (355)
T ss_pred             HHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCC--CCe
Confidence                   38899999999999998754 36677888888888888889999999999999999999999987543  589


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCc--ccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA--AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERF  224 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~  224 (255)
                      ||+++++.+|++|+++.+++.+|...+....+...  .........+.......+|++|++++|||.|.++++++|++++
T Consensus       249 yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~  328 (355)
T PRK10217        249 YNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTV  328 (355)
T ss_pred             EEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcCcHHHHHHHHH
Confidence            99999999999999999999998532211100000  0000000111112446789999999999999999999999999


Q ss_pred             HHHHHhc
Q 025270          225 EEYVKIG  231 (255)
Q Consensus       225 ~~~~~~~  231 (255)
                      +|++.+.
T Consensus       329 ~~~~~~~  335 (355)
T PRK10217        329 QWYLANE  335 (355)
T ss_pred             HHHHhCH
Confidence            9998874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.97  E-value=1.4e-29  Score=214.66  Aligned_cols=200  Identities=19%  Similarity=0.188  Sum_probs=160.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCC----CCCCCCC--CCCCCCChhHHHHHHHh---------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE----PPHVEGD--VVKPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~----~~~~E~~--~~~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      |+.++.+|+++|++.++++|||+||.++|+....    .++.|+.  +..| .+.|+..|...|         .++++++
T Consensus       113 N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p-~s~Yg~sK~~~E~~~~~~~~~~g~~~~i  191 (370)
T PLN02695        113 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP-QDAYGLEKLATEELCKHYTKDFGIECRI  191 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence            4889999999999999999999999999986432    2466654  3444 367777766554         3899999


Q ss_pred             EecCcccCCCCCC-----CcHHHHHHHHHc-CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCcc
Q 025270           82 FRPQYMIGSGNNK-----DCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  155 (255)
Q Consensus        82 lRp~~v~G~~~~~-----~~~~~~~~~~~~-~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~  155 (255)
                      +||+++|||+...     .....++..+.. +.++.++++|++.++|+|++|+++++..+++...   +++||+++++.+
T Consensus       192 lR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~nv~~~~~~  268 (370)
T PLN02695        192 GRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEMV  268 (370)
T ss_pred             EEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhccC---CCceEecCCCce
Confidence            9999999997532     135567777766 4667888999999999999999999999887643   489999999999


Q ss_pred             CHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          156 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      |++|+++.+.+.+|.+.++...+.+...           ....+|++|++++|||.|.++++++|+++++|++++.
T Consensus       269 s~~el~~~i~~~~g~~~~i~~~~~~~~~-----------~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~~  333 (370)
T PLN02695        269 SMNEMAEIALSFENKKLPIKHIPGPEGV-----------RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQI  333 (370)
T ss_pred             eHHHHHHHHHHHhCCCCCceecCCCCCc-----------cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999987666554433211           2345799999999999999999999999999998864

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.97  E-value=1.9e-29  Score=209.02  Aligned_cols=202  Identities=24%  Similarity=0.314  Sum_probs=156.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC----CCCCCCChhHHHHHHHh---------hCCceEEEe
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISE---------NFSNWASFR   83 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~----~~~~~~~~y~~ek~~~e---------~~~~~~ilR   83 (255)
                      |+.++.+|+++|++.++++|||+||..||+.....+++|++    +..|....|+.+|...|         .+++++++|
T Consensus        77 n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R  156 (306)
T PLN02725         77 NLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGM  156 (306)
T ss_pred             HhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence            38899999999999999999999999999976667888876    33332223665555443         389999999


Q ss_pred             cCcccCCCCCC-----CcHHHHHHH----HHcCCCeec-cCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           84 PQYMIGSGNNK-----DCEEWFFDR----IVRKRPVPI-PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        84 p~~v~G~~~~~-----~~~~~~~~~----~~~~~~~~i-~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      |+.|||++...     ..++.++..    ...+.++.+ +++|.+.++|||++|++++++.+++....  ++.||+++++
T Consensus       157 ~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~--~~~~ni~~~~  234 (306)
T PLN02725        157 PTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG--AEHVNVGSGD  234 (306)
T ss_pred             ecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc--CcceEeCCCC
Confidence            99999997531     234444443    345666555 78889999999999999999999987543  3678999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+|+.|+++.+++.+|.+..+...+.....          .....+|++|++ .+||+|+++++++|+++++|++++-
T Consensus       235 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~  301 (306)
T PLN02725        235 EVTIKELAELVKEVVGFEGELVWDTSKPDG----------TPRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYLENY  301 (306)
T ss_pred             cccHHHHHHHHHHHhCCCCceeecCCCCCc----------ccccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            999999999999999987665443322211          134568999997 5999999999999999999998764

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.97  E-value=4.6e-29  Score=210.26  Aligned_cols=215  Identities=20%  Similarity=0.243  Sum_probs=159.7

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC------CCCCChhHHHHHHHh---------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------KPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~------~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      |+.++.+++++|++.+ +||||+||..+||.....++.|+.+.      ..+.+.|+.+|...|         .++++++
T Consensus        95 n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i  173 (347)
T PRK11908         95 DFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTL  173 (347)
T ss_pred             HHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEE
Confidence            3889999999999988 69999999999987555566665432      122356777776543         3899999


Q ss_pred             EecCcccCCCCCC---------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           82 FRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        82 lRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                      +||+++|||+...         .+++.++..+..|.++.++++|.+.++|||++|++++++.+++++.. ..+++||+++
T Consensus       174 lR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~  253 (347)
T PRK11908        174 FRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGN  253 (347)
T ss_pred             EeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCC
Confidence            9999999997532         25677888888898888888889999999999999999999987642 2358999998


Q ss_pred             C-CccCHHHHHHHHHHHhCCCCeeeecCCCc--cc-ccc--cccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          152 D-RAVTLDGMAKLCAQAAGLPVEIVHYDPKA--AG-IDA--KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       152 ~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~~-~~~--~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      + ..+|++|+++.+.+.+|....+...+...  .. ...  .............|++|++++|||.|.++++++|+++++
T Consensus       254 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~  333 (347)
T PRK11908        254 PKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFE  333 (347)
T ss_pred             CCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHH
Confidence            7 47999999999999999643331100000  00 000  000001123455789999999999999999999999999


Q ss_pred             HHHHhcc
Q 025270          226 EYVKIGR  232 (255)
Q Consensus       226 ~~~~~~~  232 (255)
                      |++++..
T Consensus       334 ~~~~~~~  340 (347)
T PRK11908        334 AYRGHVA  340 (347)
T ss_pred             HHHHHHH
Confidence            9987654

>PLN02427 UDP-apiose/xylose synthase

Probab=99.97  E-value=6e-29  Score=212.37  Aligned_cols=209  Identities=19%  Similarity=0.227  Sum_probs=152.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC---------------------CCCChhHHHHHHHh-
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK---------------------PDAGHVQVEKYISE-   74 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~---------------------~~~~~y~~ek~~~e-   74 (255)
                      |+.++.+++++|++.+ +||||+||.++||.....+..|+.+..                     .+.+.|+.+|...| 
T Consensus       113 n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~  191 (386)
T PLN02427        113 NFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIER  191 (386)
T ss_pred             HHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHH
Confidence            4888999999999887 799999999999864332333322210                     01234665554433 


Q ss_pred             --------hCCceEEEecCcccCCCCCC------------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHH
Q 025270           75 --------NFSNWASFRPQYMIGSGNNK------------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  134 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  134 (255)
                              .+++++++||++||||+...            ..+..++..+..+.++.+++++.+.++|||++|+|++++.
T Consensus       192 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~  271 (386)
T PLN02427        192 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLL  271 (386)
T ss_pred             HHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHH
Confidence                    38999999999999997531            1345566777888888888888899999999999999999


Q ss_pred             HhcCCCcCCCCEEEecCC-CccCHHHHHHHHHHHhCCCCe-----e--eecCCCcccccccccCCcCCCceeeCHHHHHH
Q 025270          135 AVENPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPVE-----I--VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKD  206 (255)
Q Consensus       135 ~l~~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  206 (255)
                      +++++....+++||++++ +.+|++|+++.+.+.+|....     .  ...+.....    ............|.+|+++
T Consensus       272 al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~  347 (386)
T PLN02427        272 MIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFY----GEGYDDSDKRIPDMTIINK  347 (386)
T ss_pred             HHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccccc----CccccchhhccCCHHHHHH
Confidence            998764323589999987 589999999999999984210     0  011110000    0000122456779999999


Q ss_pred             hcCCCccCChHHHHHHHHHHHHHh
Q 025270          207 ILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       207 ~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      +|||+|.++++++|+++++|++++
T Consensus       348 ~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        348 QLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             hcCCCcCccHHHHHHHHHHHHHHH
Confidence            999999999999999999999876

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=1.1e-28  Score=208.28  Aligned_cols=217  Identities=16%  Similarity=0.137  Sum_probs=164.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhC---------CcceEEEeccccccCCCC---------C-CCCCCCCCCCCCCChhHH
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS---------GVKQFLFISSAGIYKPAD---------E-PPHVEGDVVKPDAGHVQV   68 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~---------~v~r~i~~Ss~~vy~~~~---------~-~~~~E~~~~~~~~~~y~~   68 (255)
                      ++.+++.|  +.++.+++++|++.         ++++|||+||.++|+...         . .+++|+.+..|. +.|+.
T Consensus        93 ~~~~~~~N--~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~-~~Y~~  169 (352)
T PRK10084         93 PAAFIETN--IVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPS-SPYSA  169 (352)
T ss_pred             chhhhhhh--hHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCC-ChhHH
Confidence            45566666  99999999999874         567999999999998521         1 246777766553 56666


Q ss_pred             HHHHHh---------hCCceEEEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           69 EKYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        69 ek~~~e---------~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                      +|...|         ++++++++|+++||||+... .+++.++..+..+..+.++++|++.++|||++|+|+++..+++.
T Consensus       170 sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~  249 (352)
T PRK10084        170 SKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTE  249 (352)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence            665533         38999999999999998643 36677778888888888888899999999999999999999986


Q ss_pred             CCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHH
Q 025270          139 PEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE  218 (255)
Q Consensus       139 ~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~  218 (255)
                      ...  +++||+++++.+|++|+++.+++.+|...+.. .+.. .........+.....+.+|++|+++.|||+|.+++++
T Consensus       250 ~~~--~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~  325 (352)
T PRK10084        250 GKA--GETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-TSYR-EQITYVADRPGHDRRYAIDASKISRELGWKPQETFES  325 (352)
T ss_pred             CCC--CceEEeCCCCcCcHHHHHHHHHHHhccccccc-cchh-hhccccccCCCCCceeeeCHHHHHHHcCCCCcCCHHH
Confidence            543  58999999999999999999999998642221 0100 0000001111122456789999999999999999999


Q ss_pred             HHHHHHHHHHHhc
Q 025270          219 DLKERFEEYVKIG  231 (255)
Q Consensus       219 ~i~~~~~~~~~~~  231 (255)
                      +|+++++|++++.
T Consensus       326 ~l~~~~~~~~~~~  338 (352)
T PRK10084        326 GIRKTVEWYLANT  338 (352)
T ss_pred             HHHHHHHHHHhCH
Confidence            9999999998863

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.96  E-value=6.1e-29  Score=214.62  Aligned_cols=206  Identities=17%  Similarity=0.187  Sum_probs=157.2

Q ss_pred             EecccCcccHHHHHHHHhhCCcc-eEEEeccccccCCCCCCCCCC-----------CC---CCCCCCChhHHHHHHHh--
Q 025270           12 FRTNNNFRLQRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVE-----------GD---VVKPDAGHVQVEKYISE--   74 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~~~~v~-r~i~~Ss~~vy~~~~~~~~~E-----------~~---~~~~~~~~y~~ek~~~e--   74 (255)
                      ++.|  +.++.+++++|++.+++ +||++||.++||... .+++|           ++   +..| .+.|+.+|++.|  
T Consensus       163 ~~~N--v~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~~~~e~~~~~~~~P-~s~Yg~SK~a~E~l  238 (442)
T PLN02572        163 QHNN--VIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQA-SSFYHLSKVHDSHN  238 (442)
T ss_pred             HHHH--HHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCcccccccccccccccccCCCCC-CCcchhHHHHHHHH
Confidence            4455  99999999999999985 899999999998643 12222           21   2232 356776666544  


Q ss_pred             -------hCCceEEEecCcccCCCCCC------------------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHH
Q 025270           75 -------NFSNWASFRPQYMIGSGNNK------------------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS  129 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a  129 (255)
                             ++++++++||++||||+...                  ..++.++.++..|+++.++|+|++.++|+||+|+|
T Consensus       239 ~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva  318 (442)
T PLN02572        239 IAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTV  318 (442)
T ss_pred             HHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHH
Confidence                   28999999999999997542                  24556777888888888899999999999999999


Q ss_pred             HHHHHHhcCCCcCC-CCEEEecCCCccCHHHHHHHHHHH---hCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHH
Q 025270          130 SMLTLAVENPEAAS-SNIFNLVSDRAVTLDGMAKLCAQA---AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAK  205 (255)
Q Consensus       130 ~~~~~~l~~~~~~~-~~~~~i~~~~~~s~~el~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  205 (255)
                      ++++.++++....+ ..+||+++ +.+|++|+++.+.+.   +|.+..+...+.+....        .......|.+|++
T Consensus       319 ~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~~~p~~~~~~--------~~~~~~~d~~k~~  389 (442)
T PLN02572        319 RCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVISVPNPRVEA--------EEHYYNAKHTKLC  389 (442)
T ss_pred             HHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCeeeCCCCcccc--------cccccCccHHHHH
Confidence            99999998653211 25899986 579999999999999   88776665554432211        1135567999998


Q ss_pred             HhcCCCccC---ChHHHHHHHHHHHHHhc
Q 025270          206 DILGWRSTT---NLPEDLKERFEEYVKIG  231 (255)
Q Consensus       206 ~~lG~~p~~---~~~~~i~~~~~~~~~~~  231 (255)
                      + |||+|.+   ++.++|.+++.||+.+-
T Consensus       390 ~-LGw~p~~~~~~l~~~l~~~~~~~~~~~  417 (442)
T PLN02572        390 E-LGLEPHLLSDSLLDSLLNFAVKYKDRV  417 (442)
T ss_pred             H-cCCCCCCcHHHHHHHHHHHHHHHHhhc
Confidence            5 9999998   89999999999998553

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.96  E-value=9e-29  Score=223.77  Aligned_cols=216  Identities=16%  Similarity=0.217  Sum_probs=163.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC------CCCCChhHHHHHHHh---------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------KPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~------~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      |+.++.+++++|++.+ ++|||+||.++||.....+++|+++.      ..+.+.|+.+|...|         +++++++
T Consensus       409 Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~i  487 (660)
T PRK08125        409 DFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTL  487 (660)
T ss_pred             hHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEE
Confidence            4899999999999988 79999999999997655677887642      112345776666544         3799999


Q ss_pred             EecCcccCCCCCC---------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           82 FRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        82 lRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                      +||++||||+...         ..++.++.++..+.++.++++|.+.++|+|++|+|++++.++++... ..|++||+++
T Consensus       488 lR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~  567 (660)
T PRK08125        488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGN  567 (660)
T ss_pred             EEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCC
Confidence            9999999997532         25677888888888888888899999999999999999999987532 2358999999


Q ss_pred             CC-ccCHHHHHHHHHHHhCCCCeeeecCCCcc--cccccc---cCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          152 DR-AVTLDGMAKLCAQAAGLPVEIVHYDPKAA--GIDAKK---AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       152 ~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      ++ .+|++|+++.+.+.+|.+......+....  ......   ..........+|++|++++|||.|+++++++|+++++
T Consensus       568 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~  647 (660)
T PRK08125        568 PDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLD  647 (660)
T ss_pred             CCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHH
Confidence            85 79999999999999996432222222110  000000   0011224456799999999999999999999999999


Q ss_pred             HHHHhccc
Q 025270          226 EYVKIGRD  233 (255)
Q Consensus       226 ~~~~~~~~  233 (255)
                      |++++...
T Consensus       648 ~~~~~~~~  655 (660)
T PRK08125        648 FFLRTVDL  655 (660)
T ss_pred             HHHhcccc
Confidence            99887643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=1.7e-28  Score=222.85  Aligned_cols=202  Identities=20%  Similarity=0.326  Sum_probs=159.8

Q ss_pred             CcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCC---CCCCCCCCCCCChhHHHHHHHh---------hCCceEEEe
Q 025270           17 NFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPP---HVEGDVVKPDAGHVQVEKYISE---------NFSNWASFR   83 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~---~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilR   83 (255)
                      |+.++.+++++|++.+ ++||||+||..+||.....+   ..|+++..|. +.|+.+|...|         ++++++++|
T Consensus       107 Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~-~~Y~~sK~~aE~~v~~~~~~~~l~~vilR  185 (668)
T PLN02260        107 NIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPT-NPYSATKAGAEMLVMAYGRSYGLPVITTR  185 (668)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCC-CCcHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence            3889999999999987 89999999999999754322   3555555443 45555554433         379999999


Q ss_pred             cCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHH
Q 025270           84 PQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK  162 (255)
Q Consensus        84 p~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~  162 (255)
                      |++|||++.... .++.++..+..|.++.+++++.+.++|||++|+|+++..++++...  +++||+++++.+|+.|+++
T Consensus       186 ~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~--~~vyni~~~~~~s~~el~~  263 (668)
T PLN02260        186 GNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEV--GHVYNIGTKKERRVIDVAK  263 (668)
T ss_pred             cccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCC--CCEEEECCCCeeEHHHHHH
Confidence            999999987543 5677888888888888889999999999999999999999986543  5899999999999999999


Q ss_pred             HHHHHhCCCCee--eecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhcc
Q 025270          163 LCAQAAGLPVEI--VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       163 ~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~  232 (255)
                      .+++.+|.+...  ...+..          ++....+.+|++|++ .|||.|.++++++|+++++|++++..
T Consensus       264 ~i~~~~g~~~~~~i~~~~~~----------p~~~~~~~~d~~k~~-~lGw~p~~~~~egl~~~i~w~~~~~~  324 (668)
T PLN02260        264 DICKLFGLDPEKSIKFVENR----------PFNDQRYFLDDQKLK-KLGWQERTSWEEGLKKTMEWYTSNPD  324 (668)
T ss_pred             HHHHHhCCCCcceeeecCCC----------CCCcceeecCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhChh
Confidence            999999975432  111111          112245668999997 59999999999999999999998653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.96  E-value=3.9e-28  Score=201.91  Aligned_cols=203  Identities=15%  Similarity=0.186  Sum_probs=159.0

Q ss_pred             CcccHHHHHHHHhhCCcc-eEEEeccccccCCCCCC-CCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecC
Q 025270           17 NFRLQRPVADWAKSSGVK-QFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~-r~i~~Ss~~vy~~~~~~-~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~   85 (255)
                      |+.++.+++++|++.+++ ++|++||..+||..... +.+|+.+..+. +.|+..|...|         .+++++++||+
T Consensus       100 n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~  178 (317)
T TIGR01181       100 NVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS-SPYSASKAASDHLVRAYHRTYGLPALITRCS  178 (317)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC-CchHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            388899999999987543 89999999999865432 57777766543 45665554333         38899999999


Q ss_pred             cccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHH
Q 025270           86 YMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC  164 (255)
Q Consensus        86 ~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i  164 (255)
                      .+||+.... .+++.++..+..+.++++++++++.++|+|++|+|+++..++++...  +++||+++++.++++|+++.+
T Consensus       179 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~i  256 (317)
T TIGR01181       179 NNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRV--GETYNIGGGNERTNLEVVETI  256 (317)
T ss_pred             cccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCC--CceEEeCCCCceeHHHHHHHH
Confidence            999997653 36777888888888888888899999999999999999999986543  589999999999999999999


Q ss_pred             HHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          165 AQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+.+|.+............         ......+|++|++++|||.|.++++++|+++++||++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  314 (317)
T TIGR01181       257 LELLGKDEDLITHVEDRPG---------HDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE  314 (317)
T ss_pred             HHHhCCCcccccccCCCcc---------chhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence            9999975333211111111         113346899999999999999999999999999998765

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=3.8e-28  Score=204.38  Aligned_cols=209  Identities=13%  Similarity=0.102  Sum_probs=158.0

Q ss_pred             CcccHHHHHHHHhhCCcc---eEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEec
Q 025270           17 NFRLQRPVADWAKSSGVK---QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRP   84 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~---r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp   84 (255)
                      |+.++.+++++|++.+++   +|||+||.++||.....+.+|+.+..|. +.|+.+|...|         +++++++.|+
T Consensus       105 n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~  183 (343)
T TIGR01472       105 DGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR-SPYAAAKLYAHWITVNYREAYGLFAVNGIL  183 (343)
T ss_pred             HHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHhCCceEEEee
Confidence            478999999999998763   8999999999997655678888877654 67777776555         2788999999


Q ss_pred             CcccCCCCCCC----cHHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           85 QYMIGSGNNKD----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        85 ~~v~G~~~~~~----~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      .++|||+....    .+..++.++..|+. ..++|+|++.++|+|++|+|++++.+++++.   +++||+++++.+|++|
T Consensus       184 ~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~---~~~yni~~g~~~s~~e  260 (343)
T TIGR01472       184 FNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK---PDDYVIATGETHSVRE  260 (343)
T ss_pred             cccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC---CccEEecCCCceeHHH
Confidence            99999874432    23445666667764 3456889999999999999999999998753   3689999999999999


Q ss_pred             HHHHHHHHhCCCCeeee-------cCCCcc----cccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          160 MAKLCAQAAGLPVEIVH-------YDPKAA----GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      +++.+.+.+|.+..+..       .+....    ........+........|++|++++|||.|+++++++|++++++|+
T Consensus       261 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~  340 (343)
T TIGR01472       261 FVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDL  340 (343)
T ss_pred             HHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHH
Confidence            99999999997543211       000000    0000011122234556799999999999999999999999999987


Q ss_pred             H
Q 025270          229 K  229 (255)
Q Consensus       229 ~  229 (255)
                      +
T Consensus       341 ~  341 (343)
T TIGR01472       341 E  341 (343)
T ss_pred             h
Confidence            4

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=5.3e-28  Score=204.22  Aligned_cols=203  Identities=17%  Similarity=0.212  Sum_probs=156.9

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------hCCceEEEecCcc
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYM   87 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------~~~~~~ilRp~~v   87 (255)
                      +.++.+++++|++.++++||++||.++|+.....+++|+.+..+. +.|+.+|...|          .+++++++|++++
T Consensus       109 ~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v  187 (352)
T PLN02240        109 LVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSAT-NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNP  187 (352)
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCc
Confidence            889999999999999999999999999987666788998887764 56776655443          2578899999999


Q ss_pred             cCCCCC------C----CcHHHHHHHHHcCC--CeeccC------CCCcceeeeeHHHHHHHHHHHhcCC---CcCCCCE
Q 025270           88 IGSGNN------K----DCEEWFFDRIVRKR--PVPIPG------SGMQFTNIAHVRDLSSMLTLAVENP---EAASSNI  146 (255)
Q Consensus        88 ~G~~~~------~----~~~~~~~~~~~~~~--~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~---~~~~~~~  146 (255)
                      ||++..      .    ..+..++..+..+.  .+.+++      +|.+.++|||++|+|++++.+++..   ....+++
T Consensus       188 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~  267 (352)
T PLN02240        188 VGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEA  267 (352)
T ss_pred             CCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCce
Confidence            997431      1    11223455555543  344444      6788999999999999999888643   1222489


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                      ||+++++.+|++|+++.+++.+|.+.++...+.....          ......|++|++++|||+|.++++++|+++++|
T Consensus       268 yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~  337 (352)
T PLN02240        268 YNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGD----------AEEVYASTEKAEKELGWKAKYGIDEMCRDQWNW  337 (352)
T ss_pred             EEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCC----------hhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999987776554433221          134567999999999999999999999999999


Q ss_pred             HHHhc
Q 025270          227 YVKIG  231 (255)
Q Consensus       227 ~~~~~  231 (255)
                      ++++.
T Consensus       338 ~~~~~  342 (352)
T PLN02240        338 ASKNP  342 (352)
T ss_pred             HHhCc
Confidence            98875

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.96  E-value=8.6e-28  Score=202.01  Aligned_cols=202  Identities=11%  Similarity=0.094  Sum_probs=156.5

Q ss_pred             CcccHHHHHHHHhhCCcc-----eEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceEEE
Q 025270           17 NFRLQRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASF   82 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~-----r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~il   82 (255)
                      |+.++.+++++|++.+++     +||++||.++||.... +.+|+.+..|. +.|+.+|.+.|.         ++.++..
T Consensus       110 N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~~  187 (340)
T PLN02653        110 VATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPR-SPYAVAKVAAHWYTVNYREAYGLFACNG  187 (340)
T ss_pred             HHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHcCCeEEEe
Confidence            389999999999998875     8999999999997654 78888877654 667777765543         6778899


Q ss_pred             ecCcccCCCCCCCc----HHHHHHHHHcCCCeec-cCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCH
Q 025270           83 RPQYMIGSGNNKDC----EEWFFDRIVRKRPVPI-PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  157 (255)
Q Consensus        83 Rp~~v~G~~~~~~~----~~~~~~~~~~~~~~~i-~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~  157 (255)
                      |+.++|||+....+    +..++.++..+.+..+ .|+|++.++|+|++|+|++++.++++..   +++||+++++.+|+
T Consensus       188 ~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~---~~~yni~~g~~~s~  264 (340)
T PLN02653        188 ILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK---PDDYVVATEESHTV  264 (340)
T ss_pred             eeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC---CCcEEecCCCceeH
Confidence            99999998754433    3344555667765544 4888999999999999999999998753   37899999999999


Q ss_pred             HHHHHHHHHHhCCCC--eeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          158 DGMAKLCAQAAGLPV--EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       158 ~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      +|+++.+.+.+|.+.  .+...+...        .+.......+|++|++++|||+|+++++++|+++++||+..-
T Consensus       265 ~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~~  332 (340)
T PLN02653        265 EEFLEEAFGYVGLNWKDHVEIDPRYF--------RPAEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLELA  332 (340)
T ss_pred             HHHHHHHHHHcCCCCCcceeeCcccC--------CccccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence            999999999999642  222111110        111224556799999999999999999999999999988653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.96  E-value=1.7e-27  Score=198.05  Aligned_cols=201  Identities=20%  Similarity=0.252  Sum_probs=153.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHH-----HHhh------CCceEEEecC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-----ISEN------FSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~-----~~e~------~~~~~ilRp~   85 (255)
                      |+.++.+++++|++.++ +|||+||.++|+.... +.+|+++...+.+.|+.+|.     +.++      +++++++||+
T Consensus        91 n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~  168 (314)
T TIGR02197        91 NYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYF  168 (314)
T ss_pred             HHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEe
Confidence            48999999999999887 7999999999987543 55666543322355665554     4432      4689999999


Q ss_pred             cccCCCCCC-----CcHHHHHHHHHcCCCeecc------CCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           86 YMIGSGNNK-----DCEEWFFDRIVRKRPVPIP------GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        86 ~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~------~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      ++||++...     ..+..++..+..+.++.++      ++|.+.++|+|++|+++++..++.+ ..  +++||++++++
T Consensus       169 ~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~--~~~yni~~~~~  245 (314)
T TIGR02197       169 NVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GV--SGIFNLGTGRA  245 (314)
T ss_pred             eccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-cc--CceEEcCCCCC
Confidence            999997542     2455677777877766554      4677889999999999999999987 32  58999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      +|++|+++.+.+.+|.+.++...+.+...      .........+|++|+++.+||.|.++++++|+++++|++
T Consensus       246 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       246 RSFNDLADAVFKALGKDEKIEYIPMPEAL------RGKYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             ccHHHHHHHHHHHhCCCCcceeccCcccc------ccccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence            99999999999999976544433322210      000113456899999999999999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.96  E-value=2.5e-27  Score=196.63  Aligned_cols=199  Identities=17%  Similarity=0.143  Sum_probs=149.9

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+|+++|++.++ +|||+||.++|+.....+.+|+.+..|. +.|+.+|+..|         .+++++++||+++
T Consensus        93 n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v  170 (308)
T PRK11150         93 NYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL-NVYGYSKFLFDEYVRQILPEANSQICGFRYFNV  170 (308)
T ss_pred             HHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC-CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeee
Confidence            48899999999999998 6999999999997655567777665553 66776665543         2789999999999


Q ss_pred             cCCCCCCC-----cHHHHHHHHHcCCCeecc-CCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHH
Q 025270           88 IGSGNNKD-----CEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA  161 (255)
Q Consensus        88 ~G~~~~~~-----~~~~~~~~~~~~~~~~i~-~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~  161 (255)
                      ||++....     ....+..++.+|..+.++ ++++..++|+|++|+|++++.+++...   +++||+++++.+|+.|++
T Consensus       171 yG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~---~~~yni~~~~~~s~~el~  247 (308)
T PRK11150        171 YGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV---SGIFNCGTGRAESFQAVA  247 (308)
T ss_pred             cCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC---CCeEEcCCCCceeHHHHH
Confidence            99976432     233455677777765454 556778999999999999999998643   479999999999999999


Q ss_pred             HHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCcc-CChHHHHHHHHHHHH
Q 025270          162 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRST-TNLPEDLKERFEEYV  228 (255)
Q Consensus       162 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~~i~~~~~~~~  228 (255)
                      +.+.+.+|.. ++...+.+....      .........|++|+++ +||+|+ ++++++|+++++|+.
T Consensus       248 ~~i~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        248 DAVLAYHKKG-EIEYIPFPDKLK------GRYQAFTQADLTKLRA-AGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             HHHHHHhCCC-cceeccCccccc------cccceecccCHHHHHh-cCCCCCCCCHHHHHHHHHHHhh
Confidence            9999999852 222222111100      0011334679999996 799987 599999999999974

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=5.1e-27  Score=197.16  Aligned_cols=204  Identities=20%  Similarity=0.227  Sum_probs=153.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------hCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.++++||++||.++|+.....+++|+++...+.+.|+.+|...|          .+++++++|+++
T Consensus       100 n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~  179 (338)
T PRK10675        100 NVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN  179 (338)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeee
Confidence            3779999999999999999999999999987666678888775222356665554433          157899999999


Q ss_pred             ccCCCCCC----------CcHHHHHHHHHcCC--CeeccC------CCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEE
Q 025270           87 MIGSGNNK----------DCEEWFFDRIVRKR--PVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIF  147 (255)
Q Consensus        87 v~G~~~~~----------~~~~~~~~~~~~~~--~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~  147 (255)
                      +||+....          ..+..++.++..+.  .+.+++      +|.+.++|+|++|+|++++.+++... ...+++|
T Consensus       180 v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~  259 (338)
T PRK10675        180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIY  259 (338)
T ss_pred             ecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceE
Confidence            99974211          11122344444442  234443      56788999999999999999998531 1224799


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      |+++++.+|++|+++.+.+.+|.+.++...+.....          ......|++|+++.+||+|.++++++|+++++|+
T Consensus       260 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~  329 (338)
T PRK10675        260 NLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGD----------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQ  329 (338)
T ss_pred             EecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCc----------hhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHH
Confidence            999999999999999999999987666544332211          1445689999999999999999999999999999


Q ss_pred             HHh
Q 025270          228 VKI  230 (255)
Q Consensus       228 ~~~  230 (255)
                      .++
T Consensus       330 ~~~  332 (338)
T PRK10675        330 SRH  332 (338)
T ss_pred             Hhh
Confidence            876

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.95  E-value=7.7e-27  Score=196.85  Aligned_cols=212  Identities=17%  Similarity=0.089  Sum_probs=157.7

Q ss_pred             ceEEecccCcccHHHHHHHHhhCC-cceEEEeccccccCCCCC-CCCCCCCCCCCCCChhHHHHH-----HHhh------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADE-PPHVEGDVVKPDAGHVQVEKY-----ISEN------   75 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~-~~~~E~~~~~~~~~~y~~ek~-----~~e~------   75 (255)
                      +..++.|  +.++.+++++|++.+ +++||++||..+|+.... .+++|+.+..|. +.|+.+|.     +..+      
T Consensus        96 ~~~~~~N--~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~~~  172 (349)
T TIGR02622        96 LETFETN--VMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH-DPYSSSKACAELVIASYRSSFFG  172 (349)
T ss_pred             HHHHHHh--HHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCC-CcchhHHHHHHHHHHHHHHHhhc
Confidence            3344445  999999999999876 889999999999986432 356776655432 45555554     3221      


Q ss_pred             -----CCceEEEecCcccCCCCC--CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC---cCCCC
Q 025270           76 -----FSNWASFRPQYMIGSGNN--KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE---AASSN  145 (255)
Q Consensus        76 -----~~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~  145 (255)
                           +++++++||+++|||+..  ..+++.+++.+..|..+.+ ++|.+.++|+|++|+|++++.++++..   ...++
T Consensus       173 ~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~  251 (349)
T TIGR02622       173 VANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAG  251 (349)
T ss_pred             ccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHHHHhhcCccccc
Confidence                 689999999999999753  2367888888888887766 468899999999999999998887521   11147


Q ss_pred             EEEecCC--CccCHHHHHHHHHHHhCC-CCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHH
Q 025270          146 IFNLVSD--RAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  222 (255)
Q Consensus       146 ~~~i~~~--~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~  222 (255)
                      +||++++  +.+++.++++.+.+.++. +..+...+....        +.......+|++|++++|||+|+++++++|++
T Consensus       252 ~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~  323 (349)
T TIGR02622       252 AWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNH--------PHEARLLKLDSSKARTLLGWHPRWGLEEAVSR  323 (349)
T ss_pred             eeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCC--------CcccceeecCHHHHHHHhCCCCCCCHHHHHHH
Confidence            9999974  689999999999987753 333322111110        11124567899999999999999999999999


Q ss_pred             HHHHHHHhcc
Q 025270          223 RFEEYVKIGR  232 (255)
Q Consensus       223 ~~~~~~~~~~  232 (255)
                      +++|+++...
T Consensus       324 ~i~w~~~~~~  333 (349)
T TIGR02622       324 TVDWYKAWLR  333 (349)
T ss_pred             HHHHHHHHhc
Confidence            9999987643

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.95  E-value=4.9e-27  Score=193.85  Aligned_cols=200  Identities=15%  Similarity=0.171  Sum_probs=152.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----CCceEEEecCcccCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNWASFRPQYMIGSG   91 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----~~~~~ilRp~~v~G~~   91 (255)
                      |+.++.+++++|++.|+ +|||+||..||+.....|++|+++..|. +.|+.+|+..|.     ..+++++|++++|||+
T Consensus        81 N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~-~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~  158 (299)
T PRK09987         81 NATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPL-NVYGETKLAGEKALQEHCAKHLIFRTSWVYAGK  158 (299)
T ss_pred             HHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCC-CHHHHHHHHHHHHHHHhCCCEEEEecceecCCC
Confidence            48899999999999997 7999999999988766789998887764 667766665554     6688999999999997


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCC--CCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHh-
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGS--GMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAA-  168 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~-  168 (255)
                      .. .++..+++.+..+.++.++++  +...+.+.+++|+++++..++++...  +++||+++++.+|+.|+++.+.+.+ 
T Consensus       159 ~~-~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~--~giyni~~~~~~s~~e~~~~i~~~~~  235 (299)
T PRK09987        159 GN-NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV--AGLYHLVASGTTTWHDYAALVFEEAR  235 (299)
T ss_pred             CC-CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC--CCeEEeeCCCCccHHHHHHHHHHHHH
Confidence            54 356777887778888888877  55555666778888888888765433  3799999999999999999998764 


Q ss_pred             --CCCCe---eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          169 --GLPVE---IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       169 --g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                        |.+.+   +...+.....     ....+..+..+|++|+++.|||+|. +|+++|+++++.+
T Consensus       236 ~~g~~~~~~~i~~~~~~~~~-----~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~  293 (299)
T PRK09987        236 KAGITLALNKLNAVPTSAYP-----TPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTEL  293 (299)
T ss_pred             hcCCCcCcCeeeecchhhcC-----CCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHH
Confidence              43332   2222211100     0112336678999999999999985 9999999998755

>PLN02214 cinnamoyl-CoA reductase

Probab=99.95  E-value=3.3e-26  Score=192.24  Aligned_cols=215  Identities=16%  Similarity=0.115  Sum_probs=148.7

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccc-cccCCCCC---CCCCCCCCC-----CCCCChhHHHHHHHh------
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSA-GIYKPADE---PPHVEGDVV-----KPDAGHVQVEKYISE------   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~-~vy~~~~~---~~~~E~~~~-----~~~~~~y~~ek~~~e------   74 (255)
                      ..++.|  +.++.+++++|++.+++||||+||. ++|+....   .+++|+++.     ..+.+.|+.+|++.|      
T Consensus        98 ~~~~~n--v~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~  175 (342)
T PLN02214         98 QMVEPA--VNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWET  175 (342)
T ss_pred             HHHHHH--HHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHH
Confidence            344445  9999999999999999999999996 58975332   246777421     112245665555443      


Q ss_pred             ---hCCceEEEecCcccCCCCCCC---cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                         ++++++++||++||||+....   ....+ ..+..|.... +  +++.++|||++|+|++++.+++++..  ++.||
T Consensus       176 ~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~-~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~~--~g~yn  249 (342)
T PLN02214        176 AKEKGVDLVVLNPVLVLGPPLQPTINASLYHV-LKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPSA--SGRYL  249 (342)
T ss_pred             HHHcCCcEEEEeCCceECCCCCCCCCchHHHH-HHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCccc--CCcEE
Confidence               289999999999999986532   12222 2344555432 3  34578999999999999999998654  47899


Q ss_pred             ecCCCccCHHHHHHHHHHHhCC-CCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      ++++ .++++|+++.+++.++. +.+....+..          +.......+|++|++ +|||+| ++++++|+++++|+
T Consensus       250 ~~~~-~~~~~el~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~d~~k~~-~LG~~p-~~lee~i~~~~~~~  316 (342)
T PLN02214        250 LAES-ARHRGEVVEILAKLFPEYPLPTKCKDEK----------NPRAKPYKFTNQKIK-DLGLEF-TSTKQSLYDTVKSL  316 (342)
T ss_pred             EecC-CCCHHHHHHHHHHHCCCCCCCCCCcccc----------CCCCCccccCcHHHH-HcCCcc-cCHHHHHHHHHHHH
Confidence            9874 68999999999999863 1111110000          011234568999998 599999 69999999999999


Q ss_pred             HHhccccccccchhhHHH
Q 025270          228 VKIGRDKKAMQFEIDDKI  245 (255)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~  245 (255)
                      ++.+.....-.-..++.+
T Consensus       317 ~~~~~~~~~~~~~~~~~~  334 (342)
T PLN02214        317 QEKGHLAPPPPSSSQESL  334 (342)
T ss_pred             HHcCCCCCCCCchhHHHH
Confidence            998876444333333333

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.94  E-value=1.2e-25  Score=186.71  Aligned_cols=207  Identities=26%  Similarity=0.339  Sum_probs=165.3

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCC-CCCCCCCChhHHHHHHHhh---------CCce
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEG-DVVKPDAGHVQVEKYISEN---------FSNW   79 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~-~~~~~~~~~y~~ek~~~e~---------~~~~   79 (255)
                      ..+.|  +.++.+++++|++.++++|||+||.++|+.. ...+++|+ .+..|. +.|+.+|+..|.         ++++
T Consensus        88 ~~~~n--v~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~-~~Yg~sK~~~E~~~~~~~~~~~~~~  164 (314)
T COG0451          88 FLDVN--VDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL-NPYGVSKLAAEQLLRAYARLYGLPV  164 (314)
T ss_pred             HHHHH--HHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCe
Confidence            45566  9999999999999999999998888877654 33478888 566554 367777766553         5999


Q ss_pred             EEEecCcccCCCCCCC----cHHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC-
Q 025270           80 ASFRPQYMIGSGNNKD----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR-  153 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~-  153 (255)
                      +++||++||||+....    ....++..+..+.+ ..+.+++...++++|++|+++++..+++++..  + +||++++. 
T Consensus       165 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~-~~ni~~~~~  241 (314)
T COG0451         165 VILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG--G-VFNIGSGTA  241 (314)
T ss_pred             EEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC--c-EEEeCCCCC
Confidence            9999999999987764    44555666777776 56666778889999999999999999998875  3 99999997 


Q ss_pred             ccCHHHHHHHHHHHhCCCCe-eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          154 AVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      ..+++|+++.+.+.+|.... +...+.        ............|++|+++.|||.|..++++++.+++.|+....
T Consensus       242 ~~~~~e~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         242 EITVRELAEAVAEAVGSKAPLIVYIPL--------GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             cEEHHHHHHHHHHHhCCCCcceeecCC--------CCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            89999999999999998766 333332        01111236678899999999999999999999999999987754

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.94  E-value=1.2e-25  Score=187.74  Aligned_cols=203  Identities=18%  Similarity=0.224  Sum_probs=153.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------hCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|.+.++++||++||.++|+.....+++|+++..+. +.|+..|...|          .+++++++||+.
T Consensus        97 n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~-~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~  175 (328)
T TIGR01179        97 NVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI-NPYGRSKLMSERILRDLSKADPGLSYVILRYFN  175 (328)
T ss_pred             hHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCC-CchHHHHHHHHHHHHHHHHhccCCCEEEEecCc
Confidence            4899999999999999999999999999987666678888776643 56665554433          378999999999


Q ss_pred             ccCCCCCC----------CcHHHHHHHHH-cCCCeecc------CCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           87 MIGSGNNK----------DCEEWFFDRIV-RKRPVPIP------GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        87 v~G~~~~~----------~~~~~~~~~~~-~~~~~~i~------~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                      +||+....          ..++.+..... ....+.++      ++|...++|||++|+++++..++..... ..+++||
T Consensus       176 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n  255 (328)
T TIGR01179       176 VAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYN  255 (328)
T ss_pred             ccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEE
Confidence            99985322          12333443333 22333332      2567789999999999999999975321 2258999


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCC-hHHHHHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN-LPEDLKERFEEY  227 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~i~~~~~~~  227 (255)
                      +++++.+|++|+++.+++.+|.+.++...+.....          ......|++|++++|||+|.++ ++++|+++++|+
T Consensus       256 ~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~  325 (328)
T TIGR01179       256 LGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGD----------PASLVADASKIRRELGWQPKYTDLEIIIKTAWRWE  325 (328)
T ss_pred             cCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCcc----------ccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence            99999999999999999999988776544432211          1345579999999999999997 999999999998


Q ss_pred             HHh
Q 025270          228 VKI  230 (255)
Q Consensus       228 ~~~  230 (255)
                      .++
T Consensus       326 ~~~  328 (328)
T TIGR01179       326 SRN  328 (328)
T ss_pred             hcC
Confidence            764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.94  E-value=6.5e-26  Score=186.26  Aligned_cols=202  Identities=15%  Similarity=0.144  Sum_probs=151.2

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHH-----HHHhhCCceEEEecCcccCCCC
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK-----YISENFSNWASFRPQYMIGSGN   92 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek-----~~~e~~~~~~ilRp~~v~G~~~   92 (255)
                      +.++.+++++|++.++ +||++||.++|+.....+++|+++..+. +.|+.+|     ++...+++++++||+.|||++.
T Consensus        78 ~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~  155 (287)
T TIGR01214        78 ALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPL-NVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGG  155 (287)
T ss_pred             HHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCc-chhhHHHHHHHHHHHHhCCCeEEEEeeecccCCC
Confidence            7889999999998886 8999999999987666688888876653 5565554     4445589999999999999986


Q ss_pred             CCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCC
Q 025270           93 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV  172 (255)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~  172 (255)
                      ...++..++..+..+.++.+.+  ++.++++|++|+|+++..+++.+... +++||+++++.+|+.|+++.+.+.+|.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  232 (287)
T TIGR01214       156 GRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARA-RGVYHLANSGQCSWYEFAQAIFEEAGADG  232 (287)
T ss_pred             CCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCC-CCeEEEECCCCcCHHHHHHHHHHHhCccc
Confidence            4455666777777777766654  46789999999999999999876333 58999999999999999999999999765


Q ss_pred             eeeecCCCcccccc-cccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          173 EIVHYDPKAAGIDA-KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       173 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      .....+........ ............+|++|++++||| +.++++++|.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~-~~~~~~~~l~~~~~  285 (287)
T TIGR01214       233 LLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT-PLPHWREALRAYLQ  285 (287)
T ss_pred             ccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC-CCccHHHHHHHHHh
Confidence            42211100000000 000011124567999999999999 55799999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.94  E-value=1e-25  Score=169.83  Aligned_cols=202  Identities=19%  Similarity=0.197  Sum_probs=172.0

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC----CCCCChhHHHH---------HHHhhCCceEEEe
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----KPDAGHVQVEK---------YISENFSNWASFR   83 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~----~~~~~~y~~ek---------~~~e~~~~~~ilR   83 (255)
                      |++...|++..|-++||++++++.|+++|.+....|++|+..+    .|.-..|+..|         +..++|..++.+-
T Consensus        83 Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsvi  162 (315)
T KOG1431|consen   83 NLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVI  162 (315)
T ss_pred             cceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeec
Confidence            5888999999999999999999999999999888899998643    34334577776         2334589999999


Q ss_pred             cCcccCCCCCCC-----cHHHHHHHHHc----CC-CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           84 PQYMIGSGNNKD-----CEEWFFDRIVR----KR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        84 p~~v~G~~~~~~-----~~~~~~~~~~~----~~-~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      |+++|||.++..     .++.+++++..    |. .+.++|+|...++|+|++|+|++++.++++-+.  -+-.+++.++
T Consensus       163 PtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~--vEpiils~ge  240 (315)
T KOG1431|consen  163 PTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG--VEPIILSVGE  240 (315)
T ss_pred             cccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC--ccceEeccCc
Confidence            999999987664     67788887653    44 689999999999999999999999999997765  3667888877


Q ss_pred             --ccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCC-hHHHHHHHHHHHHHh
Q 025270          154 --AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN-LPEDLKERFEEYVKI  230 (255)
Q Consensus       154 --~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~i~~~~~~~~~~  230 (255)
                        .+|++|+++++.+++|+..++.......++.          .....|++|++. |+|.|.++ |+++|.++++||.++
T Consensus       241 ~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq----------~kKtasnsKL~s-l~pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  241 SDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQ----------FKKTASNSKLRS-LLPDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             cceeEHHHHHHHHHHHhCCCceEEeeccCCCCC----------cccccchHHHHH-hCCCcccChHHHHHHHHHHHHHHh
Confidence              8999999999999999999999888887775          567789999996 89999986 999999999999876


Q ss_pred             c
Q 025270          231 G  231 (255)
Q Consensus       231 ~  231 (255)
                      -
T Consensus       310 y  310 (315)
T KOG1431|consen  310 Y  310 (315)
T ss_pred             H
Confidence            4

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.94  E-value=2.3e-25  Score=186.17  Aligned_cols=204  Identities=14%  Similarity=0.106  Sum_probs=147.1

Q ss_pred             ceEEecccCcccHHHHHHHHhhC-CcceEEEeccccccCCC-----CCCCCCCCCCCCCC-----CChhHHHHHHHh---
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPA-----DEPPHVEGDVVKPD-----AGHVQVEKYISE---   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~-----~~~~~~E~~~~~~~-----~~~y~~ek~~~e---   74 (255)
                      ...++.|  +.++.+++++|.+. ++++||++||.++|+..     ...+++|+++..|.     .+.|+.+|...|   
T Consensus        98 ~~~~~~n--~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~  175 (325)
T PLN02989         98 VELINPA--VNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAA  175 (325)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHH
Confidence            3344555  99999999999885 57899999998876532     23357787766442     245665555443   


Q ss_pred             ------hCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  146 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  146 (255)
                            ++++++++||+++|||+....  +...++..+..|+.+.  +  .+.++|+|++|+|++++.+++++..  +++
T Consensus       176 ~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~~~~~--~~~  249 (325)
T PLN02989        176 WRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALETPSA--NGR  249 (325)
T ss_pred             HHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhcCccc--Cce
Confidence                  389999999999999986542  4455666777665432  2  3457899999999999999987654  478


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                      ||++ +..+|++|+++.+.+.+|. ..+.. .+....       ......+..|++|+++ |||.|.++++++|+++++|
T Consensus       250 ~ni~-~~~~s~~ei~~~i~~~~~~-~~~~~-~~~~~~-------~~~~~~~~~~~~k~~~-lg~~p~~~l~~gi~~~~~~  318 (325)
T PLN02989        250 YIID-GPVVTIKDIENVLREFFPD-LCIAD-RNEDIT-------ELNSVTFNVCLDKVKS-LGIIEFTPTETSLRDTVLS  318 (325)
T ss_pred             EEEe-cCCCCHHHHHHHHHHHCCC-CCCCC-CCCCcc-------cccccCcCCCHHHHHH-cCCCCCCCHHHHHHHHHHH
Confidence            9996 5579999999999999974 22111 111000       0011356789999886 9999999999999999999


Q ss_pred             HHHhc
Q 025270          227 YVKIG  231 (255)
Q Consensus       227 ~~~~~  231 (255)
                      +++.+
T Consensus       319 ~~~~~  323 (325)
T PLN02989        319 LKEKC  323 (325)
T ss_pred             HHHhC
Confidence            97654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.93  E-value=6e-25  Score=184.60  Aligned_cols=203  Identities=18%  Similarity=0.149  Sum_probs=142.8

Q ss_pred             EecccCcccHHHHHHHHhhC-CcceEEEeccccccCCCC----CCCCCCCCC--------CCCCCChhHHHHHHHh----
Q 025270           12 FRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHVEGDV--------VKPDAGHVQVEKYISE----   74 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~~----~~~~~E~~~--------~~~~~~~y~~ek~~~e----   74 (255)
                      ++.|  +.++.+++++|++. ++++|||+||.++|+...    ..+++|+..        ..++.+.|+.+|++.|    
T Consensus       103 ~~~n--v~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~  180 (338)
T PLN00198        103 IKPA--IQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAW  180 (338)
T ss_pred             HHHH--HHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHH
Confidence            3445  99999999999886 589999999999997432    234455421        1122355666665443    


Q ss_pred             -----hCCceEEEecCcccCCCCCCC---cHHHHHHHHHcCCCeeccC-CCCc----ceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPG-SGMQ----FTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~i~~-~~~~----~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                           ++++++++||++||||+....   .+ .++..+..+..+.+.+ ++.+    .++|+|++|+|++++.+++....
T Consensus       181 ~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~  259 (338)
T PLN00198        181 KFAEENNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESA  259 (338)
T ss_pred             HHHHhcCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCc
Confidence                 389999999999999985432   22 2334566666655554 2222    37999999999999999987643


Q ss_pred             CCCCEEEecCCCccCHHHHHHHHHHHhCC-CCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHH
Q 025270          142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL  220 (255)
Q Consensus       142 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i  220 (255)
                        ++.|+ +++..+|++|+++.+.+.++. +.+.......            ......+|++|+++ +||+|+++++++|
T Consensus       260 --~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~------------~~~~~~~~~~k~~~-~G~~p~~~l~~gi  323 (338)
T PLN00198        260 --SGRYI-CCAANTSVPELAKFLIKRYPQYQVPTDFGDFP------------SKAKLIISSEKLIS-EGFSFEYGIEEIY  323 (338)
T ss_pred             --CCcEE-EecCCCCHHHHHHHHHHHCCCCCCCccccccC------------CCCccccChHHHHh-CCceecCcHHHHH
Confidence              35675 445678999999999998863 2222111100            01345679999997 6999999999999


Q ss_pred             HHHHHHHHHhccc
Q 025270          221 KERFEEYVKIGRD  233 (255)
Q Consensus       221 ~~~~~~~~~~~~~  233 (255)
                      +++++|+++++..
T Consensus       324 ~~~~~~~~~~~~~  336 (338)
T PLN00198        324 DQTVEYFKAKGLL  336 (338)
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999987654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=5.5e-25  Score=183.65  Aligned_cols=201  Identities=20%  Similarity=0.174  Sum_probs=144.3

Q ss_pred             EEecccCcccHHHHHHHHhhC-CcceEEEecccc--ccCCC---CCCCCCCCCCCCCC-----CChhHHHHHHHh-----
Q 025270           11 LFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAG--IYKPA---DEPPHVEGDVVKPD-----AGHVQVEKYISE-----   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~--vy~~~---~~~~~~E~~~~~~~-----~~~y~~ek~~~e-----   74 (255)
                      .++.|  +.++.+++++|++. +++||||+||.+  +|+..   ...+++|+.+..|.     .+.|+.+|.+.|     
T Consensus        98 ~~~~n--v~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~  175 (322)
T PLN02662         98 LIDPA--VKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWK  175 (322)
T ss_pred             HHHHH--HHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHH
Confidence            44455  99999999999987 899999999976  46532   22357777654431     134665555443     


Q ss_pred             ----hCCceEEEecCcccCCCCCC--CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                          ++++++++||+++|||....  .....++..+..|..  ..  +.+.++|||++|+|++++.+++++..  ++.||
T Consensus       176 ~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~  249 (322)
T PLN02662        176 FAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--TF--PNASYRWVDVRDVANAHIQAFEIPSA--SGRYC  249 (322)
T ss_pred             HHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--cC--CCCCcCeEEHHHHHHHHHHHhcCcCc--CCcEE
Confidence                38999999999999997543  234455666666543  22  34678999999999999999997654  36788


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      ++ +..+|++|+++.+.+.++.. .+   +.....   .+  + ......+|++|+++ |||.+ ++++++|+++++|++
T Consensus       250 ~~-g~~~s~~e~~~~i~~~~~~~-~~---~~~~~~---~~--~-~~~~~~~d~~k~~~-lg~~~-~~~~~~l~~~~~~~~  316 (322)
T PLN02662        250 LV-ERVVHYSEVVKILHELYPTL-QL---PEKCAD---DK--P-YVPTYQVSKEKAKS-LGIEF-IPLEVSLKDTVESLK  316 (322)
T ss_pred             Ee-CCCCCHHHHHHHHHHHCCCC-CC---CCCCCC---cc--c-cccccccChHHHHH-hCCcc-ccHHHHHHHHHHHHH
Confidence            87 56799999999999988741 11   111000   00  0 11446799999995 99987 699999999999999


Q ss_pred             Hhcc
Q 025270          229 KIGR  232 (255)
Q Consensus       229 ~~~~  232 (255)
                      +.+.
T Consensus       317 ~~~~  320 (322)
T PLN02662        317 EKGF  320 (322)
T ss_pred             HcCC
Confidence            8775

>PLN02650 dihydroflavonol-4-reductase

Probab=99.93  E-value=1.1e-24  Score=183.81  Aligned_cols=208  Identities=16%  Similarity=0.157  Sum_probs=141.7

Q ss_pred             eEEecccCcccHHHHHHHHhhCC-cceEEEeccccccCCC-CCCC-CCCCCCC--------CCCCChhHHHHHHHh----
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPA-DEPP-HVEGDVV--------KPDAGHVQVEKYISE----   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~-~~~~-~~E~~~~--------~~~~~~y~~ek~~~e----   74 (255)
                      ..++.|  +.++.+++++|++.+ ++||||+||.++|+.. ...+ ++|+...        ..+.+.|+.+|...|    
T Consensus        98 ~~~~~N--v~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~  175 (351)
T PLN02650         98 EVIKPT--VNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAW  175 (351)
T ss_pred             hhhhHH--HHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHH
Confidence            455666  999999999999986 8899999998776543 2223 4555321        111245666665544    


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHH--HcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRI--VRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  147 (255)
                           ++++++++||+++|||+........++..+  ..+... ..+ ....++|+|++|+|++++.+++++..  ++.|
T Consensus       176 ~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~r~~v~V~Dva~a~~~~l~~~~~--~~~~  251 (351)
T PLN02650        176 KYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYS-IIKQGQFVHLDDLCNAHIFLFEHPAA--EGRY  251 (351)
T ss_pred             HHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccC-cCCCcceeeHHHHHHHHHHHhcCcCc--CceE
Confidence                 389999999999999986543323333322  233322 122 22347999999999999999987654  3578


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                       ++++..+|++|+++.+.+.++.. .+   +....+      .+........|++|++ .|||.|+++++++|+++++|+
T Consensus       252 -i~~~~~~s~~el~~~i~~~~~~~-~~---~~~~~~------~~~~~~~~~~d~~k~~-~lG~~p~~~l~egl~~~i~~~  319 (351)
T PLN02650        252 -ICSSHDATIHDLAKMLREKYPEY-NI---PARFPG------IDEDLKSVEFSSKKLT-DLGFTFKYSLEDMFDGAIETC  319 (351)
T ss_pred             -EecCCCcCHHHHHHHHHHhCccc-CC---CCCCCC------cCcccccccCChHHHH-HhCCCCCCCHHHHHHHHHHHH
Confidence             45567799999999999988631 11   111000      0011234567888876 699999999999999999999


Q ss_pred             HHhccccc
Q 025270          228 VKIGRDKK  235 (255)
Q Consensus       228 ~~~~~~~~  235 (255)
                      ++.+..+.
T Consensus       320 ~~~~~~~~  327 (351)
T PLN02650        320 REKGLIPL  327 (351)
T ss_pred             HHcCCCCc
Confidence            98876644

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.93  E-value=4.1e-24  Score=178.69  Aligned_cols=213  Identities=20%  Similarity=0.191  Sum_probs=151.0

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCC-CCCCCCCCCCCCCCC--CChhHHHHHH-----Hh----hCC
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD--AGHVQVEKYI-----SE----NFS   77 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~-~~~~~~~E~~~~~~~--~~~y~~ek~~-----~e----~~~   77 (255)
                      ..++.|  +.++.+++++|++.++++||++||.++|+. ....+.+|+.+..+.  .+.|+..|..     .+    +++
T Consensus        84 ~~~~~n--~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~  161 (328)
T TIGR03466        84 EMYAAN--VEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGL  161 (328)
T ss_pred             HHHHHH--HHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcCC
Confidence            334444  899999999999999999999999999985 344577887765542  2456655543     33    378


Q ss_pred             ceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccC
Q 025270           78 NWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  156 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s  156 (255)
                      +++++||+.+||++.... ....++..+..+......   +...+|+|++|+|++++.++++...  ++.|+++ ++.+|
T Consensus       162 ~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~~--~~~~~~~-~~~~s  235 (328)
T TIGR03466       162 PVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGRI--GERYILG-GENLT  235 (328)
T ss_pred             CEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCCC--CceEEec-CCCcC
Confidence            999999999999976532 223344444444322222   2346899999999999999987543  5788886 67899


Q ss_pred             HHHHHHHHHHHhCCCCeeeecCCCcccc---------cccccCCc--------CCCceeeCHHHHHHhcCCCccCChHHH
Q 025270          157 LDGMAKLCAQAAGLPVEIVHYDPKAAGI---------DAKKAFPF--------RNMHFYAEPRAAKDILGWRSTTNLPED  219 (255)
Q Consensus       157 ~~el~~~i~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~--------~~~~~~~d~~k~~~~lG~~p~~~~~~~  219 (255)
                      ++|+++.+.+.+|.+.+....|......         ......+.        ......+|++|+++.|||+|. +++++
T Consensus       236 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~  314 (328)
T TIGR03466       236 LKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR-PAREA  314 (328)
T ss_pred             HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-CHHHH
Confidence            9999999999999876554443321100         00000110        013567899999999999995 99999


Q ss_pred             HHHHHHHHHHhc
Q 025270          220 LKERFEEYVKIG  231 (255)
Q Consensus       220 i~~~~~~~~~~~  231 (255)
                      |+++++|+++++
T Consensus       315 i~~~~~~~~~~~  326 (328)
T TIGR03466       315 LRDAVEWFRANG  326 (328)
T ss_pred             HHHHHHHHHHhC
Confidence            999999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.93  E-value=3.7e-24  Score=180.80  Aligned_cols=202  Identities=13%  Similarity=0.106  Sum_probs=138.6

Q ss_pred             cccHHHHHHHHhhCC-cceEEEeccccccCCCC-----CCCCCCCCC--C------CCCCChhHHHHHHHhh--------
Q 025270           18 FRLQRPVADWAKSSG-VKQFLFISSAGIYKPAD-----EPPHVEGDV--V------KPDAGHVQVEKYISEN--------   75 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~-----~~~~~E~~~--~------~~~~~~y~~ek~~~e~--------   75 (255)
                      +.++.+++++|++.+ +++||++||.++|+...     ..+++|+.+  .      .++.+.|+.+|++.|.        
T Consensus       114 ~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  193 (353)
T PLN02896        114 IKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE  193 (353)
T ss_pred             HHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH
Confidence            589999999998874 89999999999998532     134666522  1      1122457766665542        


Q ss_pred             -CCceEEEecCcccCCCCCCCcHHHHHHHHH---cCCCe--eccCCC---CcceeeeeHHHHHHHHHHHhcCCCcCCCCE
Q 025270           76 -FSNWASFRPQYMIGSGNNKDCEEWFFDRIV---RKRPV--PIPGSG---MQFTNIAHVRDLSSMLTLAVENPEAASSNI  146 (255)
Q Consensus        76 -~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~--~i~~~~---~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  146 (255)
                       +++++++||++||||+.... ++.++..+.   .|...  ...+..   ...++|||++|+|++++.+++.+..  +++
T Consensus       194 ~~~~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~--~~~  270 (353)
T PLN02896        194 NGIDLVSVITTTVAGPFLTPS-VPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKA--EGR  270 (353)
T ss_pred             cCCeEEEEcCCcccCCCcCCC-CCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCc--Ccc
Confidence             89999999999999976542 233333332   34321  122111   1246999999999999999987543  357


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCC-CeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLP-VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      |++ ++..++++|+++.+.+.++.. ..+...+.. .+          ......|++|++ .|||.|.++++++|+++++
T Consensus       271 ~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~-~lGw~p~~~l~~~i~~~~~  337 (353)
T PLN02896        271 YIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEEK-RG----------SIPSEISSKKLR-DLGFEYKYGIEEIIDQTID  337 (353)
T ss_pred             EEe-cCCCCCHHHHHHHHHHhCCCCCccccccccc-cC----------ccccccCHHHHH-HcCCCccCCHHHHHHHHHH
Confidence            865 466799999999999998742 222111111 11          012346888887 5999999999999999999


Q ss_pred             HHHHhccccc
Q 025270          226 EYVKIGRDKK  235 (255)
Q Consensus       226 ~~~~~~~~~~  235 (255)
                      |+++++..++
T Consensus       338 ~~~~~~~~~~  347 (353)
T PLN02896        338 CCVDHGFLPQ  347 (353)
T ss_pred             HHHHCCCCCc
Confidence            9999886543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=3.4e-24  Score=178.86  Aligned_cols=201  Identities=14%  Similarity=0.161  Sum_probs=142.9

Q ss_pred             EEecccCcccHHHHHHHHhhC-CcceEEEecccccc--CCC---CCCCCCCCCCCCC-----CCChhHHHHHHHh-----
Q 025270           11 LFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVKP-----DAGHVQVEKYISE-----   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy--~~~---~~~~~~E~~~~~~-----~~~~y~~ek~~~e-----   74 (255)
                      .++.|  +.++.+++++|++. +++|||++||.++|  +..   ...+++|+++..|     ..+.|+.+|.+.|     
T Consensus        99 ~~~~n--v~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~  176 (322)
T PLN02986         99 LIDPA--LKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWE  176 (322)
T ss_pred             hhHHH--HHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHH
Confidence            45556  99999999999986 79999999998754  432   1234666654322     1245666665443     


Q ss_pred             ----hCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                          ++++++++||++||||.....  ....++..+..|..+  +  +.+.++|||++|+|++++.+++++..  +++||
T Consensus       177 ~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~~al~~~~~--~~~yn  250 (322)
T PLN02986        177 FAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHIKALETPSA--NGRYI  250 (322)
T ss_pred             HHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHHHHhcCccc--CCcEE
Confidence                389999999999999976432  334556666666642  3  35568999999999999999998754  36899


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      ++ ++.+|++|+++.+.+.++. ..+... ......        ......+|++|+++ |||+|+ +++++|.++++|++
T Consensus       251 i~-~~~~s~~e~~~~i~~~~~~-~~~~~~-~~~~~~--------~~~~~~~d~~~~~~-lg~~~~-~l~e~~~~~~~~~~  317 (322)
T PLN02986        251 ID-GPIMSVNDIIDILRELFPD-LCIADT-NEESEM--------NEMICKVCVEKVKN-LGVEFT-PMKSSLRDTILSLK  317 (322)
T ss_pred             Ee-cCCCCHHHHHHHHHHHCCC-CCCCCC-Cccccc--------cccCCccCHHHHHH-cCCccc-CHHHHHHHHHHHHH
Confidence            95 5579999999999999873 222111 010000        01223579999874 999996 99999999999998


Q ss_pred             Hhcc
Q 025270          229 KIGR  232 (255)
Q Consensus       229 ~~~~  232 (255)
                      +.+.
T Consensus       318 ~~~~  321 (322)
T PLN02986        318 EKCL  321 (322)
T ss_pred             HcCC
Confidence            8653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.93  E-value=8.3e-25  Score=179.05  Aligned_cols=200  Identities=20%  Similarity=0.277  Sum_probs=145.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----CCceEEEecCcccCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNWASFRPQYMIGSG   91 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----~~~~~ilRp~~v~G~~   91 (255)
                      |+.++.+|+++|.+.|+ ++||+||..||+.....|++|++++.|. +.|+..|+..|.     .-+++|+|++.+||+.
T Consensus        78 N~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~-~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~  155 (286)
T PF04321_consen   78 NVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPL-NVYGRSKLEGEQAVRAACPNALILRTSWVYGPS  155 (286)
T ss_dssp             HTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----S-SHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSS
T ss_pred             hhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCC-CHHHHHHHHHHHHHHHhcCCEEEEecceecccC
Confidence            48999999999999997 7999999999988777789999998875 778877766664     5699999999999993


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCEEEecCCCccCHHHHHHHHHHHhC
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAVTLDGMAKLCAQAAG  169 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~i~~~~~~s~~el~~~i~~~~g  169 (255)
                       ...++..++..+.+++.+.++.  ++.++++|++|+|+++..++++...  ..+++||+++++.+|+.|+++.+++.+|
T Consensus       156 -~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~  232 (286)
T PF04321_consen  156 -GRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILG  232 (286)
T ss_dssp             -SSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHT
T ss_pred             -CCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhC
Confidence             3347788888888888888764  6789999999999999999997753  2248999999999999999999999999


Q ss_pred             CCC-eeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          170 LPV-EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       170 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      .+. .+...+......     ...+..+..+|++|+++.||++++ +++++|+++++.|
T Consensus       233 ~~~~~i~~~~~~~~~~-----~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~~  285 (286)
T PF04321_consen  233 LDPELIKPVSSSEFPR-----AAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQY  285 (286)
T ss_dssp             HCTTEEEEESSTTSTT-----SSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred             CCCceEEecccccCCC-----CCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHHHh
Confidence            987 444443333221     112346889999999999999885 9999999998865

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=2.2e-24  Score=171.54  Aligned_cols=212  Identities=19%  Similarity=0.213  Sum_probs=166.4

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CC
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FS   77 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~   77 (255)
                      +|-..++.|  +.|+.+++++|++++++.+|+.||+.|||.+...|++|+++..-+.++|+.+|...|.         +.
T Consensus        96 ~p~~Y~~nN--i~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~~  173 (343)
T KOG1371|consen   96 NPLSYYHNN--IAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYGW  173 (343)
T ss_pred             Cchhheehh--hhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccccc
Confidence            344455566  9999999999999999999999999999999999999999877333666665555443         67


Q ss_pred             ceEEEecCcccC--CCCCCC---------cHHHHHHHHH---------cCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           78 NWASFRPQYMIG--SGNNKD---------CEEWFFDRIV---------RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        78 ~~~ilRp~~v~G--~~~~~~---------~~~~~~~~~~---------~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                      .++.||.++++|  |.....         ..+ .+.+..         .|..... .+|+..++++|+-|+|+.+..+++
T Consensus       174 ~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t-~dgt~vrdyi~v~Dla~~h~~al~  251 (343)
T KOG1371|consen  174 KVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTT-IDGTIVRDYIHVLDLADGHVAALG  251 (343)
T ss_pred             eEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccc-cCCCeeecceeeEehHHHHHHHhh
Confidence            889999999999  322111         222 222222         1333322 256888999999999999999999


Q ss_pred             CCCc-CCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCCh
Q 025270          138 NPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL  216 (255)
Q Consensus       138 ~~~~-~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  216 (255)
                      +... ..-++||++.+...++.+++..+++..|.+.++..++.. .+.         ......+.++++++|||+|.+++
T Consensus       252 k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R-~gd---------v~~~ya~~~~a~~elgwk~~~~i  321 (343)
T KOG1371|consen  252 KLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRR-NGD---------VAFVYANPSKAQRELGWKAKYGL  321 (343)
T ss_pred             ccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCC-CCC---------ceeeeeChHHHHHHhCCccccCH
Confidence            8765 223699999999999999999999999999999887773 332         26778899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcc
Q 025270          217 PEDLKERFEEYVKIGR  232 (255)
Q Consensus       217 ~~~i~~~~~~~~~~~~  232 (255)
                      +++++++++|..+...
T Consensus       322 ee~c~dlw~W~~~np~  337 (343)
T KOG1371|consen  322 QEMLKDLWRWQKQNPS  337 (343)
T ss_pred             HHHHHHHHHHHhcCCC
Confidence            9999999999987643

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.91  E-value=8.2e-23  Score=168.10  Aligned_cols=224  Identities=14%  Similarity=0.105  Sum_probs=165.5

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCC-CCCCCCCCC------CCCCChhHHHHHHHhhC---
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEGDVV------KPDAGHVQVEKYISENF---   76 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~-~~~~E~~~~------~~~~~~y~~ek~~~e~~---   76 (255)
                      +++..+++|  +.||.+++++|++.||+++||+||.+|...... ...+|+.+.      .+..+|..+|+++.+.+   
T Consensus        94 ~~~~~~~vN--V~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~  171 (361)
T KOG1430|consen   94 DRDLAMRVN--VNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANGSD  171 (361)
T ss_pred             chhhheeec--chhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcCCC
Confidence            477788888  999999999999999999999999998754433 223333322      22334455555555553   


Q ss_pred             -CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc----CCCcCCCCEEEecC
Q 025270           77 -SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE----NPEAASSNIFNLVS  151 (255)
Q Consensus        77 -~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~----~~~~~~~~~~~i~~  151 (255)
                       +..+.+||..||||++.. .++.++..+..|+.+...+++....++++++.++.+++.+..    +....+|++|+|.+
T Consensus       172 ~l~T~aLR~~~IYGpgd~~-~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d  250 (361)
T KOG1430|consen  172 DLYTCALRPPGIYGPGDKR-LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITD  250 (361)
T ss_pred             CeeEEEEccccccCCCCcc-ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeC
Confidence             789999999999998765 566677777788877777888888999999999998887654    33345689999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCCe-eeecCCCcccc----------ccc-ccCCc-------CCCceeeCHHHHHHhcCCCc
Q 025270          152 DRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGI----------DAK-KAFPF-------RNMHFYAEPRAAKDILGWRS  212 (255)
Q Consensus       152 ~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~----------~~~-~~~~~-------~~~~~~~d~~k~~~~lG~~p  212 (255)
                      +.++...+....+.+.+|...+ ....|......          ... ....+       ......++..|++++|||.|
T Consensus       251 ~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P  330 (361)
T KOG1430|consen  251 DTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKP  330 (361)
T ss_pred             CCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCC
Confidence            9988888888899999999887 33333321100          000 01111       12466899999999999999


Q ss_pred             cCChHHHHHHHHHHHHHhccc
Q 025270          213 TTNLPEDLKERFEEYVKIGRD  233 (255)
Q Consensus       213 ~~~~~~~i~~~~~~~~~~~~~  233 (255)
                      .+++++++.+++.|.......
T Consensus       331 ~~~~~e~~~~~~~~~~~~~~~  351 (361)
T KOG1430|consen  331 LVSLEEAIQRTIHWVASESDS  351 (361)
T ss_pred             cCCHHHHHHHHHHHHhhhhhc
Confidence            999999999999987766543

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=1.9e-22  Score=160.47  Aligned_cols=205  Identities=16%  Similarity=0.171  Sum_probs=162.5

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----CCceEEE
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FSNWASF   82 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----~~~~~il   82 (255)
                      ++..+.+|  ..++.||+++|++.|. ++||+||-.||+.....|+.|+++.+|. +-|+.+|++.|.     +-..+|+
T Consensus        70 ~e~A~~vN--a~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~-nvYG~sKl~GE~~v~~~~~~~~I~  145 (281)
T COG1091          70 PELAFAVN--ATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPL-NVYGRSKLAGEEAVRAAGPRHLIL  145 (281)
T ss_pred             HHHHHHhH--HHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCCh-hhhhHHHHHHHHHHHHhCCCEEEE
Confidence            34444444  9999999999999998 6999999999998888899999998875 667777766654     6789999


Q ss_pred             ecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHH
Q 025270           83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK  162 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~  162 (255)
                      |.+++||... .+++..+++....|+++.+.  .++..+++++.|+|+++..++.....  +++||+++...+||.|+++
T Consensus       146 Rtswv~g~~g-~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~~i~~ll~~~~~--~~~yH~~~~g~~Swydfa~  220 (281)
T COG1091         146 RTSWVYGEYG-NNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLADAILELLEKEKE--GGVYHLVNSGECSWYEFAK  220 (281)
T ss_pred             EeeeeecCCC-CCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHHHHHHHHhcccc--CcEEEEeCCCcccHHHHHH
Confidence            9999999865 44677777888888888776  47889999999999999999998765  4699999988899999999


Q ss_pred             HHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          163 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       163 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                      .|.+.+|.+..+.........    .....+..+..+|++|+++.+|+.|+ +++++++++++.
T Consensus       221 ~I~~~~~~~~~v~~~~~~~~~----~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         221 AIFEEAGVDGEVIEPIASAEY----PTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE  279 (281)
T ss_pred             HHHHHhCCCcccccccccccc----CccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence            999999977644421111100    00111235678999999999998775 999999998764

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.89  E-value=8e-23  Score=166.50  Aligned_cols=164  Identities=17%  Similarity=0.218  Sum_probs=124.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCC---CCCCCCCCC-CCChhHHHHHHHhh------C
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPP---HVEGDVVKP-DAGHVQVEKYISEN------F   76 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~---~~E~~~~~~-~~~~y~~ek~~~e~------~   76 (255)
                      .+.++++|  +.||+||+++|++++|+||||+||.++++.. ...+   .+|+.+.++ ....|+.+|..+|.      +
T Consensus        85 ~~~~~~vN--V~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~  162 (280)
T PF01073_consen   85 PEEYYKVN--VDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANG  162 (280)
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcc
Confidence            44566666  9999999999999999999999999988752 1222   244443221 22456655555543      2


Q ss_pred             --------CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC---C---CcC
Q 025270           77 --------SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN---P---EAA  142 (255)
Q Consensus        77 --------~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---~---~~~  142 (255)
                              +..++|||+.||||++.. ..+.+...+..|......|++....+++|++|+|.+++.+++.   +   ...
T Consensus       163 ~~~~~g~~l~t~~lRP~~IyGp~d~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~  241 (280)
T PF01073_consen  163 SELKNGGRLRTCALRPAGIYGPGDQR-LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERV  241 (280)
T ss_pred             cccccccceeEEEEeccEEeCccccc-ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccC
Confidence                    789999999999998765 4555566666675666778888899999999999999987653   2   334


Q ss_pred             CCCEEEecCCCccC-HHHHHHHHHHHhCCCCee
Q 025270          143 SSNIFNLVSDRAVT-LDGMAKLCAQAAGLPVEI  174 (255)
Q Consensus       143 ~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~~~  174 (255)
                      .|+.|+|++++++. +.|+...+.+.+|.+.+.
T Consensus       242 ~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  242 AGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             CCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            58999999999999 999999999999997665

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK05865 hypothetical protein; Provisional

Probab=99.88  E-value=1.1e-21  Score=178.38  Aligned_cols=181  Identities=16%  Similarity=0.164  Sum_probs=134.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++++|++.++++||++||..                     |..+|+++.+++++++++||++|||++.    
T Consensus        79 Nv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------K~aaE~ll~~~gl~~vILRp~~VYGP~~----  133 (854)
T PRK05865         79 NIDGTANVLKAMAETGTGRIVFTSSGH---------------------QPRVEQMLADCGLEWVAVRCALIFGRNV----  133 (854)
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEECCcH---------------------HHHHHHHHHHcCCCEEEEEeceEeCCCh----
Confidence            588999999999999999999999953                     6788999988999999999999999863    


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCC-CCeee
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIV  175 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~  175 (255)
                       ..++..+.. .++...|++...++|||++|+|+++..+++..... +++||+++++.+|++|+++.+.+.... ..+. 
T Consensus       134 -~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~-ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~-  209 (854)
T PRK05865        134 -DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVID-SGPVNLAAPGELTFRRIAAALGRPMVPIGSPV-  209 (854)
T ss_pred             -HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcC-CCeEEEECCCcccHHHHHHHHhhhhccCCchh-
Confidence             233444432 22333345566789999999999999999755433 489999999999999999998874321 0000 


Q ss_pred             ecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                        ... .+. . ...........+|++|+++.|||+|+++++++|+++++|++.+-
T Consensus       210 --~~~-~~~-~-~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~ri  260 (854)
T PRK05865        210 --LRR-VTS-F-AELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGRI  260 (854)
T ss_pred             --hhh-ccc-h-hhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Confidence              000 000 0 00000112446899999999999999999999999999998754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.87  E-value=1e-21  Score=161.63  Aligned_cols=196  Identities=18%  Similarity=0.158  Sum_probs=133.6

Q ss_pred             CcccHHHHHHHHhhCCcc--eEEEeccccccCCCCCCCCCCCCCCCCCCChh-----HHHHHH---HhhCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVK--QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV-----QVEKYI---SENFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~--r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y-----~~ek~~---~e~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++++++  +||++||.++|+.....+++|+.+..+. +.+     ..|..+   .+.+++++++||+.
T Consensus        86 n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~  164 (292)
T TIGR01777        86 RIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD-DFLAELCRDWEEAAQAAEDLGTRVVLLRTGI  164 (292)
T ss_pred             ccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC-ChHHHHHHHHHHHhhhchhcCCceEEEeeee
Confidence            388999999999999873  5777777788987666678888744321 222     223332   23479999999999


Q ss_pred             ccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        87 v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      +||+...  ....++........ ..++++++.+++||++|+|+++..+++++..  +++||+++++.+|++|+++.+++
T Consensus       165 v~G~~~~--~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~--~g~~~~~~~~~~s~~di~~~i~~  239 (292)
T TIGR01777       165 VLGPKGG--ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASI--SGPVNATAPEPVRNKEFAKALAR  239 (292)
T ss_pred             EECCCcc--hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCccc--CCceEecCCCccCHHHHHHHHHH
Confidence            9999643  22333222221111 1246788999999999999999999987654  47999999999999999999999


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHHHH
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDL  220 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i  220 (255)
                      .+|.+..+ ..|.........+...........+++|+++ +||+|++ +++|++
T Consensus       240 ~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~  292 (292)
T TIGR01777       240 ALHRPAFF-PVPAFVLRALLGEMADLLLKGQRVLPEKLLE-AGFQFQYPDLDEAL  292 (292)
T ss_pred             HhCCCCcC-cCCHHHHHHHhchhhHHHhCCcccccHHHHh-cCCeeeCcChhhcC
Confidence            99975433 2333221100000000112456678899985 9999998 588764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.87  E-value=2.4e-21  Score=164.21  Aligned_cols=186  Identities=14%  Similarity=0.161  Sum_probs=129.5

Q ss_pred             CcccHHHHHHHHhhC-CcceEEEeccc--cccCCC--CC--CCCCCCCCCC-----CCCChhHHHHHHHh---------h
Q 025270           17 NFRLQRPVADWAKSS-GVKQFLFISSA--GIYKPA--DE--PPHVEGDVVK-----PDAGHVQVEKYISE---------N   75 (255)
Q Consensus        17 n~~~~~~ll~aa~~~-~v~r~i~~Ss~--~vy~~~--~~--~~~~E~~~~~-----~~~~~y~~ek~~~e---------~   75 (255)
                      |+.++.+++++|++. +++||||+||.  .+|+..  ..  .+++|+++..     .+.+.|+.+|+..|         .
T Consensus       155 nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  234 (367)
T PLN02686        155 EAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK  234 (367)
T ss_pred             hHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc
Confidence            499999999999986 79999999996  477642  12  2355654221     12244665554433         3


Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC-CcCCCCEEEecCCCc
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRA  154 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~~i~~~~~  154 (255)
                      +++++++||++||||+...... ..+..+..|. ..++++|.  ++|+||+|+|++++.+++.. ....+++| +++++.
T Consensus       235 gl~~v~lRp~~vyGp~~~~~~~-~~~~~~~~g~-~~~~g~g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~  309 (367)
T PLN02686        235 GLKLATICPALVTGPGFFRRNS-TATIAYLKGA-QEMLADGL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHV  309 (367)
T ss_pred             CceEEEEcCCceECCCCCCCCC-hhHHHHhcCC-CccCCCCC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCC
Confidence            8999999999999997543211 1223445554 45666554  57999999999999999853 11224678 777889


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCCh
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL  216 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  216 (255)
                      ++++|+++.+.+.+|.+......+....+         ....+..|++|++++|||.|+-..
T Consensus       310 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---------d~~~~~~d~~kl~~~l~~~~~~~~  362 (367)
T PLN02686        310 VSREDEAEELARQIGLPINKIAGNSSSDD---------TPARFELSNKKLSRLMSRTRRCCY  362 (367)
T ss_pred             ccHHHHHHHHHHHcCCCCCcCCCchhhcC---------CcccccccHHHHHHHHHHhhhccc
Confidence            99999999999999987665433322111         126788899999999999986443

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.86  E-value=9.4e-21  Score=157.75  Aligned_cols=197  Identities=16%  Similarity=0.169  Sum_probs=142.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++++|+++|++||||+||.+......       .  ....+|...|+++.+++++++++||+.+|+..     
T Consensus        86 ~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~-------~--~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~-----  151 (317)
T CHL00194         86 DWDGKLALIEAAKAAKIKRFIFFSILNAEQYPY-------I--PLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGL-----  151 (317)
T ss_pred             hHHHHHHHHHHHHHcCCCEEEEeccccccccCC-------C--hHHHHHHHHHHHHHHcCCCeEEEeecHHhhhh-----
Confidence            388999999999999999999999954321110       0  11236778888999999999999999988642     


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeee
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH  176 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~  176 (255)
                      +..+...+..+.++.+. ++.+.++|||++|+|+++..+++++... +++||+++++.+|++|+++.+.+.+|.+..+..
T Consensus       152 ~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~~-~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~  229 (317)
T CHL00194        152 ISQYAIPILEKQPIWIT-NESTPISYIDTQDAAKFCLKSLSLPETK-NKTFPLVGPKSWNSSEIISLCEQLSGQKAKISR  229 (317)
T ss_pred             hhhhhhhhccCCceEec-CCCCccCccCHHHHHHHHHHHhcCcccc-CcEEEecCCCccCHHHHHHHHHHHhCCCCeEEe
Confidence            11222233445555543 4677789999999999999999876544 599999999999999999999999999888877


Q ss_pred             cCCCcccccc---c---c--cCC--------c-CCCceeeCHHHHHHhcCCCcc--CChHHHHHHHHHHHHH
Q 025270          177 YDPKAAGIDA---K---K--AFP--------F-RNMHFYAEPRAAKDILGWRST--TNLPEDLKERFEEYVK  229 (255)
Q Consensus       177 ~~~~~~~~~~---~---~--~~~--------~-~~~~~~~d~~k~~~~lG~~p~--~~~~~~i~~~~~~~~~  229 (255)
                      .|........   .   .  ..+        . .......+.+++++.||+.|.  +++++++++.+....+
T Consensus       230 vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  301 (317)
T CHL00194        230 VPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILK  301 (317)
T ss_pred             CCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHH
Confidence            7654331100   0   0  000        0 113445677889999999883  5899999888765544

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.85  E-value=7.7e-20  Score=147.83  Aligned_cols=205  Identities=18%  Similarity=0.181  Sum_probs=144.7

Q ss_pred             eEEecccCcccHHHHHHHHhhCC-cceEEEecccccc-CC----CCCCCCCCCCCCCCC-----CChhHHHHHHHhh---
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAGIY-KP----ADEPPHVEGDVVKPD-----AGHVQVEKYISEN---   75 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy-~~----~~~~~~~E~~~~~~~-----~~~y~~ek~~~e~---   75 (255)
                      ..++..  +.|+.|++++|++.. |||+|++||.+.- .+    .....++|++..++.     ...|..+|.++|.   
T Consensus        99 ~li~pa--v~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw  176 (327)
T KOG1502|consen   99 ELIDPA--VKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAW  176 (327)
T ss_pred             hhhhHH--HHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHH
Confidence            466667  999999999999997 9999999997743 22    123457777654321     1346655555443   


Q ss_pred             ------CCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEE
Q 025270           76 ------FSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  147 (255)
Q Consensus        76 ------~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  147 (255)
                            +++.+.+.|+.|+||...+.  .....+..+++|..-...   +....|||++|+|.+++.+++++..  ++.|
T Consensus       177 ~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E~~~a--~GRy  251 (327)
T KOG1502|consen  177 EFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALEKPSA--KGRY  251 (327)
T ss_pred             HHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHcCccc--CceE
Confidence                  79999999999999987773  334556666777532222   2334499999999999999999987  4788


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      .|.+.. .++.|+++.+.+.+....    +|.......     ........++++|++++.|++. +++++++.++++++
T Consensus       252 ic~~~~-~~~~ei~~~l~~~~P~~~----ip~~~~~~~-----~~~~~~~~~~~~k~k~lg~~~~-~~l~e~~~dt~~sl  320 (327)
T KOG1502|consen  252 ICVGEV-VSIKEIADILRELFPDYP----IPKKNAEEH-----EGFLTSFKVSSEKLKSLGGFKF-RPLEETLSDTVESL  320 (327)
T ss_pred             EEecCc-ccHHHHHHHHHHhCCCCC----CCCCCCccc-----cccccccccccHHHHhccccee-cChHHHHHHHHHHH
Confidence            888665 679999999999887533    233222100     0001234689999997444655 69999999999999


Q ss_pred             HHhcc
Q 025270          228 VKIGR  232 (255)
Q Consensus       228 ~~~~~  232 (255)
                      ++.+.
T Consensus       321 ~~~~~  325 (327)
T KOG1502|consen  321 REKGL  325 (327)
T ss_pred             HHhcC
Confidence            88764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.85  E-value=2.6e-21  Score=154.30  Aligned_cols=136  Identities=30%  Similarity=0.510  Sum_probs=116.8

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEE
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      .++.|  +.++.+++++|++.++++||++||..+|+.....+++|+++..+ .+.|+.+|...|         +++++++
T Consensus        88 ~~~~n--~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~-~~~Y~~~K~~~e~~~~~~~~~~~~~~~~  164 (236)
T PF01370_consen   88 IIEAN--VQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINP-LSPYGASKRAAEELLRDYAKKYGLRVTI  164 (236)
T ss_dssp             HHHHH--HHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCH-SSHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             ccccc--cccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            34444  99999999999999999999999999999987778899988854 467777665543         2899999


Q ss_pred             EecCcccCCC----CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           82 FRPQYMIGSG----NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        82 lRp~~v~G~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      +||+.+||+.    .....++.++.++..|+++.+++++++.++++|++|+|++++.+++++... +++||++
T Consensus       165 ~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~yNig  236 (236)
T PF01370_consen  165 LRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAA-GGIYNIG  236 (236)
T ss_dssp             EEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTT-TEEEEES
T ss_pred             ccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCC-CCEEEeC
Confidence            9999999998    334478899999999999999999999999999999999999999998833 6999986

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=2.5e-19  Score=139.95  Aligned_cols=223  Identities=15%  Similarity=0.125  Sum_probs=174.9

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------   73 (255)
                      ..|.++|..+.+.+  ..|+.+||++.+..+.  .||...||+..||.....|.+|++|..|. |+|++.|+-+      
T Consensus        92 ~vSFe~P~~T~~~~--~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr-SPYAvAKlYa~W~tvN  168 (345)
T COG1089          92 GVSFEQPEYTADVD--AIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPYAVAKLYAYWITVN  168 (345)
T ss_pred             cccccCcceeeeec--hhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC-CHHHHHHHHHHheeee
Confidence            35678888888888  9999999999998753  48999999999999988999999999875 9999999754      


Q ss_pred             ---hhCCceEEEecCcccCCCCCCCcHH----HHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           74 ---ENFSNWASFRPQYMIGSGNNKDCEE----WFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~~~~~~~~----~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                         .+|+-++.=+.++-=+|.....++.    .-+.++..|.. ....|+-+..+||-|+.|-+++++.+++++.+   .
T Consensus       169 YResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~P---d  245 (345)
T COG1089         169 YRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEP---D  245 (345)
T ss_pred             hHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCCC---C
Confidence               3477776666655555554444433    23344555644 34468889999999999999999999999885   6


Q ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCC-----------cccccccccCCcCCCceeeCHHHHHHhcCCCccC
Q 025270          146 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK-----------AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT  214 (255)
Q Consensus       146 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~  214 (255)
                      .|.++.|+..|++|++++..+..|.+.........           ....+++.+.|.+......|.+|+++.|||+|.+
T Consensus       246 dyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~  325 (345)
T COG1089         246 DYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEV  325 (345)
T ss_pred             ceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcCCcccc
Confidence            79999999999999999999999977665321111           1122344556666677889999999999999999


Q ss_pred             ChHHHHHHHHHHHHHh
Q 025270          215 NLPEDLKERFEEYVKI  230 (255)
Q Consensus       215 ~~~~~i~~~~~~~~~~  230 (255)
                      +|++-++.++++-.+.
T Consensus       326 ~~~elv~~Mv~~dl~~  341 (345)
T COG1089         326 SLEELVREMVEADLEA  341 (345)
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999876554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.82  E-value=1e-19  Score=151.87  Aligned_cols=182  Identities=14%  Similarity=0.088  Sum_probs=129.6

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCceEEE
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASF   82 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~~~il   82 (255)
                      ..++.|  +.++.+++++|++.++++||++||...+.     |.     ..+..+|++.|+++..       .+++++++
T Consensus        96 ~~~~~N--v~g~~~ll~aa~~~~~~~iV~~SS~~~~~-----p~-----~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~l  163 (324)
T TIGR03589        96 ECIRTN--INGAQNVIDAAIDNGVKRVVALSTDKAAN-----PI-----NLYGATKLASDKLFVAANNISGSKGTRFSVV  163 (324)
T ss_pred             HHHHHH--HHHHHHHHHHHHHcCCCEEEEEeCCCCCC-----CC-----CHHHHHHHHHHHHHHHHHhhccccCcEEEEE
Confidence            344555  89999999999999999999999953221     10     0112234444444322       37999999


Q ss_pred             ecCcccCCCCCCCcHHHHHHHHHcCC-CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHH
Q 025270           83 RPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA  161 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~  161 (255)
                      |||+|||++.  ..++.+.+.+..+. ++++. ++.+.++|+|++|+|++++.++++...  +++|+ +++..+++.|++
T Consensus       164 R~g~v~G~~~--~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~~--~~~~~-~~~~~~sv~el~  237 (324)
T TIGR03589       164 RYGNVVGSRG--SVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLERMLG--GEIFV-PKIPSMKITDLA  237 (324)
T ss_pred             eecceeCCCC--CcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhCCC--CCEEc-cCCCcEEHHHHH
Confidence            9999999864  36677777777675 46664 678889999999999999999987532  57784 666679999999


Q ss_pred             HHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHH
Q 025270          162 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  222 (255)
Q Consensus       162 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~  222 (255)
                      +.+.+..+    +...+......         ......|.+|+++.|||.|.+++++++..
T Consensus       238 ~~i~~~~~----~~~~~~~~g~~---------~~~~~~~~~~~~~~lg~~~~~~l~~~~~~  285 (324)
T TIGR03589       238 EAMAPECP----HKIVGIRPGEK---------LHEVMITEDDARHTYELGDYYAILPSISF  285 (324)
T ss_pred             HHHHhhCC----eeEeCCCCCch---------hHhhhcChhhhhhhcCCCCeEEEcccccc
Confidence            99998643    22222211110         02355799999999999999999999863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-18  Score=158.44  Aligned_cols=211  Identities=18%  Similarity=0.197  Sum_probs=144.3

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC-------CCCCChhHHHHHHHh-hCCceEEEecCccc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-------KPDAGHVQVEKYISE-NFSNWASFRPQYMI   88 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~-------~~~~~~y~~ek~~~e-~~~~~~ilRp~~v~   88 (255)
                      |+.++.+++++|++.++++|||+||.++||.... +.+|+...       .+..+|..+|+++.+ .+++++++||+.||
T Consensus       101 nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~  179 (657)
T PRK07201        101 NVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVV  179 (657)
T ss_pred             HhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeee
Confidence            5999999999999999999999999999986432 34444321       122234445555543 48999999999999


Q ss_pred             CCCCCCC--------cHHHHHHHHHcC-CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           89 GSGNNKD--------CEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        89 G~~~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      |+...+.        .+..++..+... ..+++.+.+....+++|++|+++++..+++.+... |++||+++++.+|++|
T Consensus       180 G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~~-g~~~ni~~~~~~s~~e  258 (657)
T PRK07201        180 GDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGRD-GQTFHLTDPKPQRVGD  258 (657)
T ss_pred             ecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCCC-CCEEEeCCCCCCcHHH
Confidence            9865431        111223333111 12344555667789999999999999998865433 5899999999999999


Q ss_pred             HHHHHHHHhCCCC---eeeecCCCccccccc-------------c-------cCCcCCCceeeCHHHHHHhc---CCCcc
Q 025270          160 MAKLCAQAAGLPV---EIVHYDPKAAGIDAK-------------K-------AFPFRNMHFYAEPRAAKDIL---GWRST  213 (255)
Q Consensus       160 l~~~i~~~~g~~~---~~~~~~~~~~~~~~~-------------~-------~~~~~~~~~~~d~~k~~~~l---G~~p~  213 (255)
                      +++.+.+.+|.+.   .....|.........             .       ...+......+|++|+++.|   |+.+.
T Consensus       259 l~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p  338 (657)
T PRK07201        259 IYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP  338 (657)
T ss_pred             HHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC
Confidence            9999999999876   444344321100000             0       00112355689999999988   54443


Q ss_pred             CChHHHHHHHHHHHHHh
Q 025270          214 TNLPEDLKERFEEYVKI  230 (255)
Q Consensus       214 ~~~~~~i~~~~~~~~~~  230 (255)
                       .+.+.+.+.++||.++
T Consensus       339 -~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        339 -RLASYAPRLWDYWERH  354 (657)
T ss_pred             -ChHHHHHHHHHHHHhc
Confidence             6889999999988776

>PLN02778 3,5-epimerase/4-reductase

Probab=99.79  E-value=3.9e-18  Score=140.64  Aligned_cols=202  Identities=14%  Similarity=0.097  Sum_probs=140.3

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCC------CCCCCCCCCCCCCCChhHHHHHHHhh----CCc
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD------EPPHVEGDVVKPDAGHVQVEKYISEN----FSN   78 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~------~~~~~E~~~~~~~~~~y~~ek~~~e~----~~~   78 (255)
                      ...++.|  +.++.+|+++|++.|++ ++++||.++|+...      ..+++|++++.++.+.|+.+|.+.|.    .-+
T Consensus        81 ~~~~~~N--v~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778         81 VETIRAN--VVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence            3444555  99999999999999996 66677778886432      22477777665555778888877775    236


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHH
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  158 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~  158 (255)
                      ..++|++.++|++..  ....|+..+..+..+...+     .+|+|++|++++++.+++...   +++||+++++.+|++
T Consensus       158 ~~~lr~~~~~~~~~~--~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~---~g~yNigs~~~iS~~  227 (298)
T PLN02778        158 VCTLRVRMPISSDLS--NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL---TGIYNFTNPGVVSHN  227 (298)
T ss_pred             cEEeeecccCCcccc--cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC---CCeEEeCCCCcccHH
Confidence            789999888886532  2345788888887654432     269999999999999997643   379999999999999


Q ss_pred             HHHHHHHHHhCCCCeee--ecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          159 GMAKLCAQAAGLPVEIV--HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       159 el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      |+++.+++.+|...+..  .+++.. .     .......+..+|++|+++.++-.++ ..+++++...+..++.
T Consensus       228 el~~~i~~~~~~~~~~~~~~i~~~~-~-----~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~  294 (298)
T PLN02778        228 EILEMYRDYIDPSFTWKNFTLEEQA-K-----VIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFEPNKKT  294 (298)
T ss_pred             HHHHHHHHHhCCCceeccccHHHHH-H-----HHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHHHHHhh
Confidence            99999999999653221  111110 0     0000013347999999998774332 5678888877766543

>PLN02996 fatty acyl-CoA reductase

Probab=99.78  E-value=1.8e-18  Score=151.34  Aligned_cols=155  Identities=13%  Similarity=0.081  Sum_probs=113.7

Q ss_pred             CcccHHHHHHHHhhC-CcceEEEeccccccCCCCC----CCCCCCC----------------------------------
Q 025270           17 NFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADE----PPHVEGD----------------------------------   57 (255)
Q Consensus        17 n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~~~----~~~~E~~----------------------------------   57 (255)
                      |+.|+.+++++|++. ++++|||+||++|||....    .++.+..                                  
T Consensus       136 Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (491)
T PLN02996        136 NTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEI  215 (491)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHH
Confidence            499999999999986 7899999999999986331    1111000                                  


Q ss_pred             ----------C--CCCCCChhHHHHHHHhh-------CCceEEEecCcccCCCCCCC--cH------HHHHHHHHcCCCe
Q 025270           58 ----------V--VKPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNKD--CE------EWFFDRIVRKRPV  110 (255)
Q Consensus        58 ----------~--~~~~~~~y~~ek~~~e~-------~~~~~ilRp~~v~G~~~~~~--~~------~~~~~~~~~~~~~  110 (255)
                                +  .....+.|+.+|+++|.       +++++++||++|||+...+.  ++      ..++..+..|...
T Consensus       216 ~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~  295 (491)
T PLN02996        216 TQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLT  295 (491)
T ss_pred             HHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEe
Confidence                      0  00011346666655543       79999999999999876542  21      2344445566666


Q ss_pred             eccCCCCcceeeeeHHHHHHHHHHHhcCC--CcCCCCEEEecCC--CccCHHHHHHHHHHHhCCC
Q 025270          111 PIPGSGMQFTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSD--RAVTLDGMAKLCAQAAGLP  171 (255)
Q Consensus       111 ~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~  171 (255)
                      .++++|++.+|+|||+|+|++++.++.+.  ....+++||++++  .++|+.++++.+.+.++..
T Consensus       296 ~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        296 CFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             EEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            78899999999999999999999998753  1112479999998  7899999999999988753

>PLN02583 cinnamoyl-CoA reductase

Probab=99.72  E-value=6.7e-17  Score=133.42  Aligned_cols=180  Identities=12%  Similarity=0.050  Sum_probs=117.0

Q ss_pred             ceEEecccCcccHHHHHHHHhhC-CcceEEEecccccc--CCC---CCCCCCCCCCCCCC-----CChhHHHHHHHh---
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVKPD-----AGHVQVEKYISE---   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy--~~~---~~~~~~E~~~~~~~-----~~~y~~ek~~~e---   74 (255)
                      +.+++.|  +.++.+++++|.+. +++|||++||.+++  +..   ...+++|+++..+.     ...|+.+|.+.|   
T Consensus        97 ~~~~~~n--v~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~  174 (297)
T PLN02583         97 EKMVDVE--VRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTA  174 (297)
T ss_pred             HHHHHHH--HHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHH
Confidence            3445556  99999999999986 68999999998754  311   22356776543211     113554444332   


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                            .+++++++||++||||+.....      ..+.+.. ...+  ...++|||++|+|++++.+++.+..  ++.|+
T Consensus       175 ~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~~~~~~~-~~~~--~~~~~~v~V~Dva~a~~~al~~~~~--~~r~~  243 (297)
T PLN02583        175 WALAMDRGVNMVSINAGLLMGPSLTQHN------PYLKGAA-QMYE--NGVLVTVDVNFLVDAHIRAFEDVSS--YGRYL  243 (297)
T ss_pred             HHHHHHhCCcEEEEcCCcccCCCCCCch------hhhcCCc-ccCc--ccCcceEEHHHHHHHHHHHhcCccc--CCcEE
Confidence                  3899999999999999765321      1223322 2222  2346799999999999999997765  46798


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCc
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS  212 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  212 (255)
                      ++++....+.++++++.+.++. .++.... .....        ......++++|+++ ||++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~-~~~~~--------~~~~~~~~~~k~~~-l~~~~  296 (297)
T PLN02583        244 CFNHIVNTEEDAVKLAQMLSPL-IPSPPPY-EMQGS--------EVYQQRIRNKKLNK-LMEDF  296 (297)
T ss_pred             EecCCCccHHHHHHHHHHhCCC-CCCCCcc-cccCC--------CccccccChHHHHH-hCccc
Confidence            8877655578899999998863 2221100 10000        01446789999985 88753

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.71  E-value=1.1e-16  Score=136.71  Aligned_cols=148  Identities=14%  Similarity=0.191  Sum_probs=116.7

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--hCCceEEEecCcccCCCCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--NFSNWASFRPQYMIGSGNNK   94 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--~~~~~~ilRp~~v~G~~~~~   94 (255)
                      |..++.+++++|++.|++|||++||.++++.     ..     .+..+|...|+.+.+  .+++++|+||+.+||+.   
T Consensus       158 n~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p-----~~-----~~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~---  224 (390)
T PLN02657        158 DYQATKNSLDAGREVGAKHFVLLSAICVQKP-----LL-----EFQRAKLKFEAELQALDSDFTYSIVRPTAFFKSL---  224 (390)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEeeccccCc-----ch-----HHHHHHHHHHHHHHhccCCCCEEEEccHHHhccc---
Confidence            3788999999999999999999999887642     11     011256667777765  68999999999999742   


Q ss_pred             CcHHHHHHHHHcCCCeeccCCCCcce-eeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC-CccCHHHHHHHHHHHhCCCC
Q 025270           95 DCEEWFFDRIVRKRPVPIPGSGMQFT-NIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDGMAKLCAQAAGLPV  172 (255)
Q Consensus        95 ~~~~~~~~~~~~~~~~~i~~~~~~~~-~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~  172 (255)
                         ..++..+..|.++.++|+|...+ ++||++|+|+++..++.++... +++||++++ +.+|++|+++.+.+.+|.+.
T Consensus       225 ---~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~-~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~  300 (390)
T PLN02657        225 ---GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKI-NKVLPIGGPGKALTPLEQGEMLFRILGKEP  300 (390)
T ss_pred             ---HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcccc-CCEEEcCCCCcccCHHHHHHHHHHHhCCCC
Confidence               22455666788877888887654 6899999999999999766544 589999986 58999999999999999988


Q ss_pred             eeeecCCCc
Q 025270          173 EIVHYDPKA  181 (255)
Q Consensus       173 ~~~~~~~~~  181 (255)
                      ++...|...
T Consensus       301 ~~~~vp~~~  309 (390)
T PLN02657        301 KFFKVPIQI  309 (390)
T ss_pred             ceEEcCHHH
Confidence            877766543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.70  E-value=2.4e-16  Score=123.32  Aligned_cols=199  Identities=16%  Similarity=0.126  Sum_probs=138.7

Q ss_pred             cccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCCh---hHHHHHHHh---hCCceEEEecCcccC
Q 025270           18 FRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISE---NFSNWASFRPQYMIG   89 (255)
Q Consensus        18 ~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~---y~~ek~~~e---~~~~~~ilRp~~v~G   89 (255)
                      +..|+.|.++..+.  +++.||--|..+.||...+..++|+.+....-..   +.-|+.+..   .+.+++++|.|.|.|
T Consensus        86 i~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs  165 (297)
T COG1090          86 INTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLS  165 (297)
T ss_pred             hHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEec
Confidence            67889999988844  6777888888889999998999999655432111   334444332   278999999999999


Q ss_pred             CCCCCCcHHHHH--HHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHH
Q 025270           90 SGNNKDCEEWFF--DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA  167 (255)
Q Consensus        90 ~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~  167 (255)
                      +....  +..++  .+...|.+   +|+|.+.++|||++|+++++..++++...  .+.||++++.+++.+++...+++.
T Consensus       166 ~~GGa--L~~m~~~fk~glGG~---~GsGrQ~~SWIhieD~v~~I~fll~~~~l--sGp~N~taP~PV~~~~F~~al~r~  238 (297)
T COG1090         166 PDGGA--LGKMLPLFKLGLGGK---LGSGRQWFSWIHIEDLVNAILFLLENEQL--SGPFNLTAPNPVRNKEFAHALGRA  238 (297)
T ss_pred             CCCcc--hhhhcchhhhccCCc---cCCCCceeeeeeHHHHHHHHHHHHhCcCC--CCcccccCCCcCcHHHHHHHHHHH
Confidence            75443  22221  12223443   58999999999999999999999999776  389999999999999999999999


Q ss_pred             hCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHHHHHHHHH
Q 025270          168 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFE  225 (255)
Q Consensus       168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i~~~~~  225 (255)
                      ++.+..+ .+|+........+...........=.+|+.+ .||+.++ ++++++.+.+.
T Consensus       239 l~RP~~~-~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~-aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         239 LHRPAIL-PVPSFALRLLLGEMADLLLGGQRVLPKKLEA-AGFQFQYPDLEEALADILK  295 (297)
T ss_pred             hCCCccc-cCcHHHHHHHhhhhHHHHhccchhhHHHHHH-CCCeeecCCHHHHHHHHHh
Confidence            9975444 4455332211110000011223334456664 7888877 79999988764

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.69  E-value=5.2e-16  Score=127.40  Aligned_cols=187  Identities=14%  Similarity=0.201  Sum_probs=126.7

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-CCceEEEecCcccCCCCCCCc
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      .....+++++|+++|++|||++||..++...              ..+...++++.+. +++++++||+.+++.....  
T Consensus        82 ~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~--------------~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~--  145 (285)
T TIGR03649        82 APPMIKFIDFARSKGVRRFVLLSASIIEKGG--------------PAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEE--  145 (285)
T ss_pred             hHHHHHHHHHHHHcCCCEEEEeeccccCCCC--------------chHHHHHHHHHhccCCCEEEEeccHHhhhhccc--
Confidence            3467899999999999999999986553210              0233456777776 9999999999998653211  


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeee
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVH  176 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~  176 (255)
                        .+...+..+..+ ..+.|+..+++||++|+|+++..++..+... +++|++++++.+|++|+++.+.+.+|++.+...
T Consensus       146 --~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~-~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~  221 (285)
T TIGR03649       146 --FHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYRALTDKVAP-NTDYVVLGPELLTYDDVAEILSRVLGRKITHVK  221 (285)
T ss_pred             --ccccccccCCeE-EecCCCCccCcccHHHHHHHHHHHhcCCCcC-CCeEEeeCCccCCHHHHHHHHHHHhCCceEEEe
Confidence              111222233333 3345778899999999999999999976544 488999999999999999999999999888776


Q ss_pred             cCCCccccccc-ccCCc-------------CCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          177 YDPKAAGIDAK-KAFPF-------------RNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       177 ~~~~~~~~~~~-~~~~~-------------~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      .+......... ...+.             ........+....+.+|..| .+|++.+++...
T Consensus       222 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p-~~~~~~~~~~~~  283 (285)
T TIGR03649       222 LTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKP-RGFRDFAESNKA  283 (285)
T ss_pred             CCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCC-ccHHHHHHHhhh
Confidence            65532110000 00000             01111123445666789666 589999888743

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.66  E-value=2.1e-15  Score=127.85  Aligned_cols=156  Identities=20%  Similarity=0.246  Sum_probs=108.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC----CCCChhHHHHHHHh-----h---CCceEEEec
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAGHVQVEKYISE-----N---FSNWASFRP   84 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~----~~~~~y~~ek~~~e-----~---~~~~~ilRp   84 (255)
                      |+.++.+++++|.+.++++|+|+||.++|+.....+..|+.+..    ...+.|+.+|+..|     .   +++++++||
T Consensus       112 nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rp  191 (367)
T TIGR01746       112 NVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRP  191 (367)
T ss_pred             hhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECC
Confidence            48999999999999999899999999999764332233333211    11234555554433     2   899999999


Q ss_pred             CcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCccCHH
Q 025270           85 QYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLD  158 (255)
Q Consensus        85 ~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~s~~  158 (255)
                      +.+||+...+.     .+..++........  ++.......+++|++|++++++.++..... ..+++||+++++.++++
T Consensus       192 g~v~G~~~~g~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~  269 (367)
T TIGR01746       192 GRILGNSYTGAINSSDILWRMVKGCLALGA--YPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLD  269 (367)
T ss_pred             CceeecCCCCCCCchhHHHHHHHHHHHhCC--CCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHH
Confidence            99999743322     22233333333222  222222367899999999999999887653 22589999999999999


Q ss_pred             HHHHHHHHHhCCCCeee
Q 025270          159 GMAKLCAQAAGLPVEIV  175 (255)
Q Consensus       159 el~~~i~~~~g~~~~~~  175 (255)
                      |+++.+.+ +|.+.+..
T Consensus       270 e~~~~i~~-~g~~~~~~  285 (367)
T TIGR01746       270 EFLEWLER-AGYNLKLV  285 (367)
T ss_pred             HHHHHHHH-cCCCCCcC
Confidence            99999999 88876643

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.1e-14  Score=111.97  Aligned_cols=209  Identities=14%  Similarity=0.138  Sum_probs=149.9

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCc---ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v---~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~   75 (255)
                      ++.+-++.  ..|+..|++|.+.++.   -||...||+..||...+.|..|.+|.-|. ++|++.|+..-         +
T Consensus       126 peYTAeVd--avGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPR-SPYa~aKmy~~WivvNyREAY  202 (376)
T KOG1372|consen  126 PEYTAEVD--AVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPR-SPYAAAKMYGYWIVVNYREAY  202 (376)
T ss_pred             ccceeecc--chhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCC-ChhHHhhhhheEEEEEhHHhh
Confidence            44555555  8899999999997753   27999999999999888999999998764 99999996532         2


Q ss_pred             CCceEEEecCcccC---CCCCCCcHHHHH----HHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEE
Q 025270           76 FSNWASFRPQYMIG---SGNNKDCEEWFF----DRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  147 (255)
Q Consensus        76 ~~~~~ilRp~~v~G---~~~~~~~~~~~~----~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  147 (255)
                      ++-.+   -|.+|.   |.....++..-+    .++..|+. ..-.|+-+..+||-|..|-+.+++.+++++.+   .-|
T Consensus       203 nmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~P---dDf  276 (376)
T KOG1372|consen  203 NMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSP---DDF  276 (376)
T ss_pred             cceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhcCCC---Cce
Confidence            33222   233333   333333443322    22333443 34457888899999999999999999999887   458


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeee-----cCCCc-----ccccccccCCcCCCceeeCHHHHHHhcCCCccCChH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVH-----YDPKA-----AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP  217 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~  217 (255)
                      .|+.++..|++|+++.--...|.......     .....     ...+++...|.+...+..|.+|+++.|||+|++++.
T Consensus       277 ViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~  356 (376)
T KOG1372|consen  277 VIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTLGWKPKVTFP  356 (376)
T ss_pred             EEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHhhCCCCccCHH
Confidence            89999999999999998887775333221     00111     122344456666788899999999999999999999


Q ss_pred             HHHHHHHH
Q 025270          218 EDLKERFE  225 (255)
Q Consensus       218 ~~i~~~~~  225 (255)
                      +-+++++.
T Consensus       357 eLVkeMv~  364 (376)
T KOG1372|consen  357 ELVKEMVA  364 (376)
T ss_pred             HHHHHHHH
Confidence            98888875

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.64  E-value=8.8e-16  Score=120.26  Aligned_cols=204  Identities=16%  Similarity=0.181  Sum_probs=139.8

Q ss_pred             EecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCC
Q 025270           12 FRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG   91 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~   91 (255)
                      .|+|  +.+.+.|+..|+++||.|||++|+...-       +.  .+.....+|+..|+.+++...+.+|+||+.+||..
T Consensus       150 ~Dvn--~~~aerlAricke~GVerfIhvS~Lgan-------v~--s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~e  218 (391)
T KOG2865|consen  150 EDVN--VHIAERLARICKEAGVERFIHVSCLGAN-------VK--SPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTE  218 (391)
T ss_pred             cccc--chHHHHHHHHHHhhChhheeehhhcccc-------cc--ChHHHHHhhhhhHHHHHhhCCcceeechhhhcccc
Confidence            3445  9999999999999999999999986511       11  11112348899999999999999999999999987


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCC-CcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCC
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSG-MQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~  170 (255)
                      +.  ++.++.....+-..+++++.| ....++|||-|+|++|+.++..+..- |.+|..+++...++.|+++.+-+....
T Consensus       219 Dr--fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~-Gktye~vGP~~yql~eLvd~my~~~~~  295 (391)
T KOG2865|consen  219 DR--FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSM-GKTYEFVGPDRYQLSELVDIMYDMARE  295 (391)
T ss_pred             hh--HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcccc-CceeeecCCchhhHHHHHHHHHHHHhh
Confidence            65  455555555545557777766 45678999999999999999988654 699999999999999999999877654


Q ss_pred             CCeeeecCCCccc------------------ccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          171 PVEIVHYDPKAAG------------------IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       171 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      -......+-+...                  +...+.--....+..++....-++||..+ ++++-.-.+.+..+++.
T Consensus       296 ~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~-t~le~~~~e~l~~yR~~  372 (391)
T KOG2865|consen  296 WPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVL-TKLELYPVEFLRQYRKG  372 (391)
T ss_pred             ccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCcee-eecccccHHHHHHHhhc
Confidence            2222222211110                  00000000112444555555555788775 57766655555545444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.63  E-value=6.5e-15  Score=134.31  Aligned_cols=198  Identities=15%  Similarity=0.150  Sum_probs=133.2

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC------CCCCCCCCCCCCCCCChhHHHHHHHhh----CC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA------DEPPHVEGDVVKPDAGHVQVEKYISEN----FS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~------~~~~~~E~~~~~~~~~~y~~ek~~~e~----~~   77 (255)
                      ++..++.|  +.++.+|+++|++.|++ +|++||.+||+..      ...|++|++++.+..+.|+.+|+..|.    ..
T Consensus       451 ~~~~~~~N--~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~  527 (668)
T PLN02260        451 KVETIRAN--VVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD  527 (668)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh
Confidence            34444555  99999999999999995 7788888898642      124788887665544677777766664    24


Q ss_pred             ceEEEecCcccCCCCCCCcHHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccC
Q 025270           78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  156 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s  156 (255)
                      +..++|+.++||.+...  ...|+..+++... +.++      ....+++|++.+++.+++...   +++||++++..+|
T Consensus       528 ~~~~~r~~~~~~~~~~~--~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~~---~giyni~~~~~~s  596 (668)
T PLN02260        528 NVCTLRVRMPISSDLSN--PRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRNL---RGIWNFTNPGVVS  596 (668)
T ss_pred             hheEEEEEEecccCCCC--ccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhCC---CceEEecCCCcCc
Confidence            67889999999754221  1255666665543 3332      235778889999888887432   4899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          157 LDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       157 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      +.|+++.+.+.++....+..++.....   ......+... .+|++|+++.+|. + .++++++.+.+.
T Consensus       597 ~~e~a~~i~~~~~~~~~~~~~~~~~~~---~~~~a~rp~~-~l~~~k~~~~~~~-~-~~~~~~l~~~~~  659 (668)
T PLN02260        597 HNEILEMYKDYIDPGFKWSNFTLEEQA---KVIVAPRSNN-EMDASKLKKEFPE-L-LSIKESLIKYVF  659 (668)
T ss_pred             HHHHHHHHHHhcCCcccccccCHHHhh---hHhhCCCccc-cccHHHHHHhCcc-c-cchHHHHHHHHh
Confidence            999999999988522112222111110   0000112233 7999999988888 5 489999998864

>PRK12320 hypothetical protein; Provisional

Probab=99.61  E-value=1.2e-14  Score=130.14  Aligned_cols=162  Identities=16%  Similarity=0.144  Sum_probs=112.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCC-
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKD-   95 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~-   95 (255)
                      |+.++.|++++|++.|+ ++||+||.  +|...              .....|.++.+++++++++|++++||++.... 
T Consensus        79 Nv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~  141 (699)
T PRK12320         79 GITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMV  141 (699)
T ss_pred             HHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------cccHHHHHHHhcCCCEEEEeCceecCCCCcccH
Confidence            47899999999999998 69999985  33211              11247777777889999999999999965532 


Q ss_pred             --cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCe
Q 025270           96 --CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  173 (255)
Q Consensus        96 --~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~  173 (255)
                        .+..++.....++          ...+||++|++++++.+++...   +++||+++++.+|++|+++.+... +....
T Consensus       142 ~r~I~~~l~~~~~~~----------pI~vIyVdDvv~alv~al~~~~---~GiyNIG~~~~~Si~el~~~i~~~-~p~~~  207 (699)
T PRK12320        142 CRTVATLLRSKVSAR----------PIRVLHLDDLVRFLVLALNTDR---NGVVDLATPDTTNVVTAWRLLRSV-DPHLR  207 (699)
T ss_pred             hHHHHHHHHHHHcCC----------ceEEEEHHHHHHHHHHHHhCCC---CCEEEEeCCCeeEHHHHHHHHHHh-CCCcc
Confidence              3344444333333          3346999999999999998643   369999999999999999998765 21111


Q ss_pred             eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHH--HHHHH
Q 025270          174 IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE--DLKER  223 (255)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~--~i~~~  223 (255)
                      +.  +.  ..          ......|....+..++|.|++++..  .+.++
T Consensus       208 ~~--~~--~~----------~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~  245 (699)
T PRK12320        208 TR--RV--RS----------WEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT  245 (699)
T ss_pred             cc--cc--cc----------HHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence            11  11  11          0224456666777789999987743  45544

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.50  E-value=6.8e-14  Score=112.47  Aligned_cols=135  Identities=20%  Similarity=0.249  Sum_probs=103.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh------------CCceEEEec
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRP   84 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~------------~~~~~ilRp   84 (255)
                      |+.||.|++++|.+++|++||++||--...               +.+-++++|.++|.            +..++++|+
T Consensus       104 Nv~GT~nv~~aa~~~~v~~~v~ISTDKAv~---------------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRF  168 (293)
T PF02719_consen  104 NVLGTQNVAEAAIEHGVERFVFISTDKAVN---------------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRF  168 (293)
T ss_dssp             HCHHHHHHHHHHHHTT-SEEEEEEECGCSS-----------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEccccccCC---------------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEe
Confidence            599999999999999999999999943221               12566666666553            247899999


Q ss_pred             CcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHH
Q 025270           85 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLC  164 (255)
Q Consensus        85 ~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i  164 (255)
                      |+|.|..  +..++.|..++.+|+++++. +++..|-|+.+++.++.++.++.....  |++|..--|+++++.|+++.+
T Consensus       169 GNVlgS~--GSVip~F~~Qi~~g~PlTvT-~p~mtRffmti~EAv~Lvl~a~~~~~~--geifvl~mg~~v~I~dlA~~~  243 (293)
T PF02719_consen  169 GNVLGSR--GSVIPLFKKQIKNGGPLTVT-DPDMTRFFMTIEEAVQLVLQAAALAKG--GEIFVLDMGEPVKILDLAEAM  243 (293)
T ss_dssp             -EETTGT--TSCHHHHHHHHHTTSSEEEC-ETT-EEEEE-HHHHHHHHHHHHHH--T--TEEEEE---TCEECCCHHHHH
T ss_pred             cceecCC--CcHHHHHHHHHHcCCcceeC-CCCcEEEEecHHHHHHHHHHHHhhCCC--CcEEEecCCCCcCHHHHHHHH
Confidence            9999963  44899999999999999886 578889999999999999999986654  689988888999999999999


Q ss_pred             HHHhCCC
Q 025270          165 AQAAGLP  171 (255)
Q Consensus       165 ~~~~g~~  171 (255)
                      .+..|..
T Consensus       244 i~~~g~~  250 (293)
T PF02719_consen  244 IELSGLE  250 (293)
T ss_dssp             HHHTT-E
T ss_pred             Hhhcccc
Confidence            9999853

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.47  E-value=1.2e-12  Score=112.34  Aligned_cols=138  Identities=22%  Similarity=0.240  Sum_probs=111.3

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-------CCceEEEecCcccC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-------FSNWASFRPQYMIG   89 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-------~~~~~ilRp~~v~G   89 (255)
                      |+.||.|++++|.+.||++||.+||--......        .  ...+|..+|+++..+       +-.++.+|+|+|.|
T Consensus       352 NV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtN--------v--mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         352 NVLGTENVAEAAIKNGVKKFVLISTDKAVNPTN--------V--MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             hhHhHHHHHHHHHHhCCCEEEEEecCcccCCch--------H--hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence            599999999999999999999999933211100        0  112455555555443       25789999999999


Q ss_pred             CCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhC
Q 025270           90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  169 (255)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  169 (255)
                      ..  +..++-|.+++.+|+++++. +++..|-|+.+.|.++.++.+......  |++|.+--|+++++.|+++.+-+..|
T Consensus       422 Sr--GSViPlFk~QI~~GgplTvT-dp~mtRyfMTI~EAv~LVlqA~a~~~g--GeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         422 SR--GSVIPLFKKQIAEGGPLTVT-DPDMTRFFMTIPEAVQLVLQAGAIAKG--GEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             CC--CCCHHHHHHHHHcCCCcccc-CCCceeEEEEHHHHHHHHHHHHhhcCC--CcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            64  44789999999999999886 688899999999999999999887554  78999888899999999999999998

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.46  E-value=6.4e-13  Score=130.49  Aligned_cols=216  Identities=18%  Similarity=0.173  Sum_probs=135.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCC------------CCCCCCCCCCCC----CCChhHHHHHHHhh-----
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD------------EPPHVEGDVVKP----DAGHVQVEKYISEN-----   75 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~------------~~~~~E~~~~~~----~~~~y~~ek~~~e~-----   75 (255)
                      |+.|+.+++++|++.++++|+|+||.++|+...            ...+.|+.....    ..+.|+.+|++.|.     
T Consensus      1085 nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~ 1164 (1389)
T TIGR03443      1085 NVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREA 1164 (1389)
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHH
Confidence            599999999999999999999999999986421            112333322111    12346666655442     


Q ss_pred             ---CCceEEEecCcccCCCCCCC-cHHHHHHHHHcCC-CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           76 ---FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        76 ---~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         +++++++||+.|||+...+. ....++..+.++. ......++...+++++++|++++++.++.++.. ..+.+||+
T Consensus      1165 ~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~ 1244 (1389)
T TIGR03443      1165 GKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHV 1244 (1389)
T ss_pred             HhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEe
Confidence               79999999999999875543 2223333333321 112223455678999999999999999876642 22368999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCeeeecCCCcc----------ccccc----cc----CCcCCCceeeCHHHHHHhcC--
Q 025270          150 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA----------GIDAK----KA----FPFRNMHFYAEPRAAKDILG--  209 (255)
Q Consensus       150 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~----------~~~~~----~~----~~~~~~~~~~d~~k~~~~lG--  209 (255)
                      +++..+++.++++.+.+ .|.+.+....+.+..          .....    ..    .........+|+++.++.+.  
T Consensus      1245 ~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~w~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1323 (1389)
T TIGR03443      1245 TGHPRIRFNDFLGTLKT-YGYDVEIVDYVHWRKSLERFVIERSEDNALFPLLHFVLDDLPQSTKAPELDDTNAATSLKAD 1323 (1389)
T ss_pred             CCCCCCcHHHHHHHHHH-hCCCCCccCHHHHHHHHHHhccccCccchhhhHHHHhhccCcccccCCCCCCHHHHHHHHhh
Confidence            99988999999999976 466655543322111          00000    00    01111244567887777663  


Q ss_pred             --C---CccC--Ch-HHHHHHHHHHHHHhccc
Q 025270          210 --W---RSTT--NL-PEDLKERFEEYVKIGRD  233 (255)
Q Consensus       210 --~---~p~~--~~-~~~i~~~~~~~~~~~~~  233 (255)
                        |   ..+.  .+ .+-|+..+++|++.+..
T Consensus      1324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 1355 (1389)
T TIGR03443      1324 AAWTGVDVSSGAGVTEEQIGIYIAYLVKVGFL 1355 (1389)
T ss_pred             cccccCCCcCCCCCCHHHHHHHHHHHHHCCCC
Confidence              2   2211  22 56788899999877654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.44  E-value=6.3e-13  Score=117.89  Aligned_cols=151  Identities=15%  Similarity=0.084  Sum_probs=105.2

Q ss_pred             CcccHHHHHHHHhhC-CcceEEEeccccccCCCCCCCCCCCCCC------------------------------------
Q 025270           17 NFRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHVEGDVV------------------------------------   59 (255)
Q Consensus        17 n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~~~~~~~E~~~~------------------------------------   59 (255)
                      |+.++.+++++|++. ++++|||+||++|||...+ .+.|...+                                    
T Consensus       243 NV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~  321 (605)
T PLN02503        243 NTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKR  321 (605)
T ss_pred             HHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhh
Confidence            499999999999987 5789999999999987531 11111100                                    


Q ss_pred             ----------------------CCCCChhHHHHHHHhh-------CCceEEEecCcc----------cCCCCCCCcHHHH
Q 025270           60 ----------------------KPDAGHVQVEKYISEN-------FSNWASFRPQYM----------IGSGNNKDCEEWF  100 (255)
Q Consensus        60 ----------------------~~~~~~y~~ek~~~e~-------~~~~~ilRp~~v----------~G~~~~~~~~~~~  100 (255)
                                            ....+.|..+|.++|.       +++++|+||+.|          |+++... ..+.+
T Consensus       322 ~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~-~~p~~  400 (605)
T PLN02503        322 HGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRM-MDPIV  400 (605)
T ss_pred             cccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccc-cchhh
Confidence                                  0011456666666654       799999999999          5554322 11111


Q ss_pred             HHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-c--CCCCEEEecCC--CccCHHHHHHHHHHHhCC
Q 025270          101 FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-A--ASSNIFNLVSD--RAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus       101 ~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~--~~~~~~~i~~~--~~~s~~el~~~i~~~~g~  170 (255)
                       ....+|.-..++++++...|+|+||.++++++.++.... .  ..+++||++++  .+++++++.+.+.+.+..
T Consensus       401 -~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        401 -LYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             -hheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence             112245433467889999999999999999999843211 1  12589999988  799999999999987654

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.41  E-value=7.9e-12  Score=95.15  Aligned_cols=192  Identities=19%  Similarity=0.214  Sum_probs=132.8

Q ss_pred             cccHHHHHHHHhhC-C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCc
Q 025270           18 FRLQRPVADWAKSS-G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQY   86 (255)
Q Consensus        18 ~~~~~~ll~aa~~~-~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~   86 (255)
                      +..+..|+++...+ . .+.+|.+|..++|-......++|+.+..-.  .| .++++.+         ...+.+++|.|.
T Consensus       105 i~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgf--d~-~srL~l~WE~aA~~~~~~~r~~~iR~Gv  181 (315)
T KOG3019|consen  105 IRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGF--DI-LSRLCLEWEGAALKANKDVRVALIRIGV  181 (315)
T ss_pred             eeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCCh--HH-HHHHHHHHHHHhhccCcceeEEEEEEeE
Confidence            67788999999887 3 357999999999988776777777765421  11 2222221         257899999999


Q ss_pred             ccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        87 v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      |.|.+...--...+.-++-.|.+   .|+|++.++|||++|++..+..+++++.-  .++.|...+++++..|+.+.+..
T Consensus       182 VlG~gGGa~~~M~lpF~~g~GGP---lGsG~Q~fpWIHv~DL~~li~~ale~~~v--~GViNgvAP~~~~n~Ef~q~lg~  256 (315)
T KOG3019|consen  182 VLGKGGGALAMMILPFQMGAGGP---LGSGQQWFPWIHVDDLVNLIYEALENPSV--KGVINGVAPNPVRNGEFCQQLGS  256 (315)
T ss_pred             EEecCCcchhhhhhhhhhccCCc---CCCCCeeeeeeehHHHHHHHHHHHhcCCC--CceecccCCCccchHHHHHHHHH
Confidence            99986554222233335556665   47899999999999999999999999765  48999999999999999999999


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCce-----eeCHHHHHHhcCCCccC-ChHHHHHHH
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHF-----YAEPRAAKDILGWRSTT-NLPEDLKER  223 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~k~~~~lG~~p~~-~~~~~i~~~  223 (255)
                      .++.+. +..+|......    .+..+.-.+     ..-..|+. ++||+..+ .+.++++++
T Consensus       257 aL~Rp~-~~pvP~fvvqA----~fG~erA~~vLeGqKV~Pqral-~~Gf~f~yp~vk~Al~~i  313 (315)
T KOG3019|consen  257 ALSRPS-WLPVPDFVVQA----LFGPERATVVLEGQKVLPQRAL-ELGFEFKYPYVKDALRAI  313 (315)
T ss_pred             HhCCCc-ccCCcHHHHHH----HhCccceeEEeeCCcccchhHh-hcCceeechHHHHHHHHH
Confidence            999653 33444432210    000011112     22334555 48998877 467787765

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.36  E-value=6e-11  Score=90.99  Aligned_cols=208  Identities=11%  Similarity=0.011  Sum_probs=139.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------C
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------F   76 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~   76 (255)
                      .+.....++|  +.|..|+++.|++++.+ +...||.+.||......-+.+-....+..-|+.+|.-+|.         +
T Consensus       127 ~NVpLA~~VN--I~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg  203 (366)
T KOG2774|consen  127 TNVPLALQVN--IRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFG  203 (366)
T ss_pred             cCCceeeeec--chhhhHHHHHHHHcCee-EeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhcC
Confidence            3444555666  99999999999999984 7778999999975532222222222234779988877664         7


Q ss_pred             CceEEEecCcccCCCCCCC----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC-CCCEEEecC
Q 025270           77 SNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-SSNIFNLVS  151 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~-~~~~~~i~~  151 (255)
                      +++-.+|.+.+......++    .....+..+++.++-.-+-.++.+.+..|.+|+.++++..+..+... ..++||+++
T Consensus       204 ~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  204 VDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             ccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence            8999999888776422221    22233444444333334445788899999999999999999877542 237999985


Q ss_pred             CCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          152 DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       152 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                       -.+|.+|+++.+.+.+.. .++...+-....       ....+.+.+|.+.++.+.-|+-.+.+..-+.-++.
T Consensus       284 -~sftpee~~~~~~~~~p~-~~i~y~~~srq~-------iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~  348 (366)
T KOG2774|consen  284 -FSFTPEEIADAIRRVMPG-FEIDYDICTRQS-------IADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVA  348 (366)
T ss_pred             -eccCHHHHHHHHHhhCCC-ceeecccchhhh-------hhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHH
Confidence             469999999999998742 333222222111       11237889999999988888776666665555554

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.28  E-value=7.2e-12  Score=100.82  Aligned_cols=121  Identities=16%  Similarity=0.152  Sum_probs=65.3

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCC-------CC--CCCCCCChhHHHHHHHhh----
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE-------GD--VVKPDAGHVQVEKYISEN----   75 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E-------~~--~~~~~~~~y~~ek~~~e~----   75 (255)
                      +...+.|  +.|+++|++.|.+.+.++|+|+||+.+.+..... ..|       ..  ......+.|..+|+++|.    
T Consensus       105 ~~~~~~N--V~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~  181 (249)
T PF07993_consen  105 SELRAVN--VDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGT-IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLRE  181 (249)
T ss_dssp             -EEHHHH--HHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHH
T ss_pred             hhhhhhH--HHHHHHHHHHHHhccCcceEEeccccccCCCCCc-ccccccccccccchhhccCCccHHHHHHHHHHHHHH
Confidence            4445555  9999999999998777799999996565544321 111       11  111222456666655543    


Q ss_pred             -----CCceEEEecCcccCCCCCCC-----cHHHHHHHHH-cCCCeeccCCCCcceeeeeHHHHHHHH
Q 025270           76 -----FSNWASFRPQYMIGSGNNKD-----CEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVRDLSSML  132 (255)
Q Consensus        76 -----~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~-~~~~~~i~~~~~~~~~~i~v~D~a~~~  132 (255)
                           +++++|+|||.|+|...++.     ....++.... .|......+++....++++|+.+|++|
T Consensus       182 a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  182 AAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             HHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred             HHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence                 89999999999999544332     2344444443 444344566666779999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.27  E-value=5.4e-11  Score=95.88  Aligned_cols=134  Identities=14%  Similarity=0.159  Sum_probs=90.7

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC-CC----CCChhHHHHHHHhhCCceEEEecCcccCCCC
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KP----DAGHVQVEKYISENFSNWASFRPQYMIGSGN   92 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~-~~----~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~   92 (255)
                      ..++.++++++++.+++|||++||.++|+.....+..+.... .+    ...+...|+++++.+++++++||+.++++..
T Consensus       109 ~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~  188 (251)
T PLN00141        109 NFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPP  188 (251)
T ss_pred             hHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCC
Confidence            678999999999999999999999999985433332221111 10    0123445666777799999999999998643


Q ss_pred             CCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC---CccCHHHHHHHHHH
Q 025270           93 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD---RAVTLDGMAKLCAQ  166 (255)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~---~~~s~~el~~~i~~  166 (255)
                      ...              +.+.........+|+.+|+|+++..++..+... +.++.+.+.   ...+++++...+++
T Consensus       189 ~~~--------------~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        189 TGN--------------IVMEPEDTLYEGSISRDQVAEVAVEALLCPESS-YKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             Cce--------------EEECCCCccccCcccHHHHHHHHHHHhcChhhc-CcEEEEecCCCCCchhHHHHHHHhhc
Confidence            211              111111112235799999999999999877654 377777753   24688888877764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.24  E-value=3.2e-12  Score=101.86  Aligned_cols=147  Identities=22%  Similarity=0.316  Sum_probs=102.1

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC-CCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-PDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~-~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      .....++++||+++||++||+.|....+.....     ..+.. ....|+..|+++++.+++++++|+|.++......  
T Consensus        80 ~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~-----~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~--  152 (233)
T PF05368_consen   80 LEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG-----SEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPP--  152 (233)
T ss_dssp             HHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT-----STTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTT--
T ss_pred             hhhhhhHHHhhhccccceEEEEEeccccccccc-----ccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhh--
Confidence            567899999999999999997666555532111     00000 0125678899999999999999999776532111  


Q ss_pred             HHHHHH-HHHcCC--CeeccCCCCcceeee-eHHHHHHHHHHHhcCCCcC-CCCEEEecCCCccCHHHHHHHHHHHhCCC
Q 025270           97 EEWFFD-RIVRKR--PVPIPGSGMQFTNIA-HVRDLSSMLTLAVENPEAA-SSNIFNLVSDRAVTLDGMAKLCAQAAGLP  171 (255)
Q Consensus        97 ~~~~~~-~~~~~~--~~~i~~~~~~~~~~i-~v~D~a~~~~~~l~~~~~~-~~~~~~i~~~~~~s~~el~~~i~~~~g~~  171 (255)
                         +.. ....+.  .+.++++++....++ +.+|+++++..++.++... .++.+.+++ +.+|.+|+++.+.+.+|++
T Consensus       153 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  153 ---FAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             ---THHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSE
T ss_pred             ---hcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCc
Confidence               111 011222  356777777767775 9999999999999997765 457777765 6799999999999999987


Q ss_pred             Ceee
Q 025270          172 VEIV  175 (255)
Q Consensus       172 ~~~~  175 (255)
                      +++.
T Consensus       229 v~y~  232 (233)
T PF05368_consen  229 VKYV  232 (233)
T ss_dssp             EEEE
T ss_pred             cEEe
Confidence            6653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.06  E-value=2.5e-10  Score=87.45  Aligned_cols=117  Identities=23%  Similarity=0.350  Sum_probs=79.4

Q ss_pred             cceEEecc----cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC--CCCCChhHHHHHHHhhCCceEE
Q 025270            8 FKALFRTN----NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV--KPDAGHVQVEKYISENFSNWAS   81 (255)
Q Consensus         8 ~d~~~~~~----~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~--~~~~~~y~~ek~~~e~~~~~~i   81 (255)
                      .|.++.+.    .+...+++++++|++++++|+|++||.++|+...........+.  .+...+...|+.+.+.++++++
T Consensus        61 ~d~vi~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~i  140 (183)
T PF13460_consen   61 ADAVIHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTI  140 (183)
T ss_dssp             SSEEEECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEE
T ss_pred             cchhhhhhhhhcccccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEE
Confidence            45555555    12556899999999999999999999999986443211111110  1112334566777777999999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                      +||+.+||+.....             . .+...+....++|+++|+|++++.++++
T Consensus       141 vrp~~~~~~~~~~~-------------~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  141 VRPGWIYGNPSRSY-------------R-LIKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EEESEEEBTTSSSE-------------E-EESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             EECcEeEeCCCcce-------------e-EEeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            99999999864321             1 1111345566999999999999998864

...

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.04  E-value=4.1e-09  Score=86.86  Aligned_cols=147  Identities=14%  Similarity=0.092  Sum_probs=87.6

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCC----CCCCCCC---------CCCCCChhHHHHHHHhh---CCceE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP----PHVEGDV---------VKPDAGHVQVEKYISEN---FSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~----~~~E~~~---------~~~~~~~y~~ek~~~e~---~~~~~   80 (255)
                      |+.||..+++.|...+.|.|+|+||.+|++.....    ..++.++         ..+.+||+.+|+++++.   |++++
T Consensus       111 NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~  190 (382)
T COG3320         111 NVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVT  190 (382)
T ss_pred             chHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeE
Confidence            59999999999999889999999999998643211    1222222         12345666666666654   89999


Q ss_pred             EEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHH-----------HHHHHHHHhcCCCcCCC
Q 025270           81 SFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRD-----------LSSMLTLAVENPEAASS  144 (255)
Q Consensus        81 ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D-----------~a~~~~~~l~~~~~~~~  144 (255)
                      |+|||.|-|+..++.     ++..++..+++-...+   +.....+.+.+++           +++++..+..++.....
T Consensus       191 I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~  267 (382)
T COG3320         191 IFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFN  267 (382)
T ss_pred             EEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhh
Confidence            999999999876443     3333444433322221   1222233333333           33334444433332221


Q ss_pred             CEEEecCCCccCHHHHHHHHHH
Q 025270          145 NIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus       145 ~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      +.+...-|..+.+.++.+.+.+
T Consensus       268 ~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         268 QLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             heecccCCCccchhHHHHhHhh
Confidence            3332333678999999998887

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.81  E-value=1.4e-08  Score=62.71  Aligned_cols=59  Identities=15%  Similarity=0.281  Sum_probs=38.3

Q ss_pred             HHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          163 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       163 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+.+++|.++++...+.....+          .....|++|++++|||+|.++|+++|+++.+|.+++.
T Consensus         1 A~e~vtG~~i~~~~~~rR~GD~----------~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np   59 (62)
T PF13950_consen    1 AFEKVTGKKIPVEYAPRRPGDP----------AHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP   59 (62)
T ss_dssp             HHHHHHTS---EEEE---TT------------SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred             CcHHHHCCCCCceECCCCCCch----------hhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence            3678899999998776655443          6789999999999999999999999999999998864

...

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.80  E-value=5.4e-09  Score=85.37  Aligned_cols=136  Identities=15%  Similarity=0.100  Sum_probs=88.4

Q ss_pred             eEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270           10 ALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ..++.|  +.++.++++++    ++.+.++||++||.......            +..+.|+.+|...+           
T Consensus       102 ~~~~~n--~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l~~~~~  167 (276)
T PRK06482        102 RQIDTN--LIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY------------PGFSLYHATKWGIEGFVEAVAQEVA  167 (276)
T ss_pred             HHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC------------CCCchhHHHHHHHHHHHHHHHHHhh
Confidence            334445  89999999997    55677899999996533211            11245666654322           


Q ss_pred             -hCCceEEEecCcc---cCCCCCCC--------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC
Q 025270           75 -NFSNWASFRPQYM---IGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  142 (255)
Q Consensus        75 -~~~~~~ilRp~~v---~G~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  142 (255)
                       ++++++++|||.+   ||++....        .....+.+......+.+         +.+++|++++++.++..+.. 
T Consensus       168 ~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~d~~~~~~a~~~~~~~~~~-  237 (276)
T PRK06482        168 PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI---------PGDPQKMVQAMIASADQTPA-  237 (276)
T ss_pred             ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC---------CCCHHHHHHHHHHHHcCCCC-
Confidence             3899999999988   66543211        01111222222221111         35789999999999986644 


Q ss_pred             CCCEEEecCCCccCHHHHHHHHHHHhCC
Q 025270          143 SSNIFNLVSDRAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus       143 ~~~~~~i~~~~~~s~~el~~~i~~~~g~  170 (255)
                       +..||+++++..+..++++.+.+.++.
T Consensus       238 -~~~~~~g~~~~~~~~~~~~~~~~~~~~  264 (276)
T PRK06482        238 -PRRLTLGSDAYASIRAALSERLAALEA  264 (276)
T ss_pred             -CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence             467999999888999888888777753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.78  E-value=2.1e-08  Score=88.16  Aligned_cols=137  Identities=9%  Similarity=0.132  Sum_probs=85.9

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++++|++.|++|||++||.+++...... ............+..+++.+.++|++++++|||.++++..... 
T Consensus       184 N~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~-~~~~sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-  261 (576)
T PLN03209        184 DYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPA-AILNLFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-  261 (576)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEccchhcccCccc-cchhhHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-
Confidence            37899999999999999999999998764211000 0000000011244567778888899999999999988743321 


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc---cCHHHHHHHH
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA---VTLDGMAKLC  164 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~---~s~~el~~~i  164 (255)
                              ..+. +.....+......+..+|+|++++.++.++....+++|.+.++..   ..+.++++.+
T Consensus       262 --------~t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~i  323 (576)
T PLN03209        262 --------ETHN-LTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKI  323 (576)
T ss_pred             --------cccc-eeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence                    0011 111111111123588999999999999977644358999998753   3455555444

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.75  E-value=3.1e-08  Score=84.66  Aligned_cols=154  Identities=16%  Similarity=0.055  Sum_probs=98.7

Q ss_pred             cCcccHHHHHHHHhhC-CcceEEEeccccccCCC---CCC--CCCCCCCC-----------------------CCCCChh
Q 025270           16 NNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPA---DEP--PHVEGDVV-----------------------KPDAGHV   66 (255)
Q Consensus        16 ~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~---~~~--~~~E~~~~-----------------------~~~~~~y   66 (255)
                      .|+.|++++++.|++. +.+-|+|+||+.+....   .+.  +..+..+.                       ....+.|
T Consensus       129 iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTY  208 (467)
T KOG1221|consen  129 INTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTY  208 (467)
T ss_pred             hhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCce
Confidence            4699999999999998 68899999998876321   111  11111010                       0001334


Q ss_pred             HHHHHHHh-----h--CCceEEEecCcccCCCCCCC--cH------HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHH
Q 025270           67 QVEKYISE-----N--FSNWASFRPQYMIGSGNNKD--CE------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  131 (255)
Q Consensus        67 ~~ek~~~e-----~--~~~~~ilRp~~v~G~~~~~~--~~------~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  131 (255)
                      .-.|.+.|     .  +++.+|+||+.|......+.  ++      ..++...-+|.--.+..+.+...++|.+|.++.+
T Consensus       209 tfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~  288 (467)
T KOG1221|consen  209 TFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNA  288 (467)
T ss_pred             eehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHH
Confidence            44444443     3  79999999999987543321  10      1111122233333455678888999999999999


Q ss_pred             HHHHhcCCC--c--CCCCEEEecCCC--ccCHHHHHHHHHHHhC
Q 025270          132 LTLAVENPE--A--ASSNIFNLVSDR--AVTLDGMAKLCAQAAG  169 (255)
Q Consensus       132 ~~~~l~~~~--~--~~~~~~~i~~~~--~~s~~el~~~i~~~~g  169 (255)
                      ++.+.-+-.  .  .+-.+||++++.  +++++++.+...+.+-
T Consensus       289 ~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  289 MIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             HHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence            997662111  1  112599999876  8999999999988765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.64  E-value=1.2e-07  Score=76.37  Aligned_cols=126  Identities=13%  Similarity=0.054  Sum_probs=73.7

Q ss_pred             CcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEEecC
Q 025270           17 NFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~ilRp~   85 (255)
                      |+.++.++++++    ++.+++++|++||...+......       ..+..+|.+.+.++.       ..++.++++||+
T Consensus       109 n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~-------~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg  181 (255)
T TIGR01963       109 MLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFK-------SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPG  181 (255)
T ss_pred             HhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCC-------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            367766666665    56678899999997655332110       011123332222221       137999999999


Q ss_pred             cccCCCCCCCcHHHHHHHHHcCCCee-------ccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCc
Q 025270           86 YMIGSGNNKDCEEWFFDRIVRKRPVP-------IPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  154 (255)
Q Consensus        86 ~v~G~~~~~~~~~~~~~~~~~~~~~~-------i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~  154 (255)
                      .++++.....     +.....+....       ....+...+++++++|+|++++.++..... ..|+.|++.++..
T Consensus       182 ~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       182 YVRTPLVEKQ-----IADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             ccccHHHHHH-----HHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            9998742211     11111111100       111234556799999999999999986532 3468899987753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.64  E-value=1.6e-07  Score=75.16  Aligned_cols=117  Identities=9%  Similarity=-0.010  Sum_probs=75.4

Q ss_pred             CcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------------HhhCCceE
Q 025270           17 NFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e~~~~~~   80 (255)
                      |+.++.++++++    ++.++++||++||...+....            ....|+..|..            .+.+++++
T Consensus       115 n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~  182 (249)
T PRK12825        115 NLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP------------GRSNYAAAKAGLVGLTKALARELAEYGITVN  182 (249)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            377777777776    456788999999977663321            11345544422            12489999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCcc
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  155 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~  155 (255)
                      ++||+.++|+.............    .+ ..     ....+++.+|+++++..++..... ..|++|+++++..+
T Consensus       183 ~i~pg~~~~~~~~~~~~~~~~~~----~~-~~-----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        183 MVAPGDIDTDMKEATIEEAREAK----DA-ET-----PLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             EEEECCccCCccccccchhHHhh----hc-cC-----CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            99999999986544322111111    10 01     112289999999999999976543 34799999988643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.63  E-value=1.2e-07  Score=76.66  Aligned_cols=128  Identities=7%  Similarity=-0.057  Sum_probs=74.6

Q ss_pred             ccc----HHHHHHHH-hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEEecC
Q 025270           18 FRL----QRPVADWA-KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQ   85 (255)
Q Consensus        18 ~~~----~~~ll~aa-~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~ilRp~   85 (255)
                      +.+    +.++++++ +..+.++||++||...+.....   .    ..+..+|.+.+.+++       ..++.++++||+
T Consensus       116 ~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~---~----~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg  188 (262)
T PRK13394        116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL---K----SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPG  188 (262)
T ss_pred             hhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC---C----cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            666    77788888 6667889999999654322110   0    011123333322222       137899999999


Q ss_pred             cccCCCCCCCcHHHHHHHHHcC---CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           86 YMIGSGNNKDCEEWFFDRIVRK---RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        86 ~v~G~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .++++..... ...........   ....+++.+....+|++++|++++++.++..... .+|+.|++.++.
T Consensus       189 ~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        189 FVRTPLVDKQ-IPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             cccchhhhhh-hHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            9998753321 11110000000   0001222334456899999999999999986543 346889888764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.50  E-value=4e-07  Score=73.36  Aligned_cols=119  Identities=7%  Similarity=-0.016  Sum_probs=71.2

Q ss_pred             ccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEE
Q 025270           18 FRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWAS   81 (255)
Q Consensus        18 ~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~i   81 (255)
                      +.+    +..++.++++.+.++||++||...+.....            .+.|...|...            ..++.+.+
T Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~------------~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~  180 (258)
T PRK12429        113 LDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG------------KAAYVSAKHGLIGLTKVVALEGATHGVTVNA  180 (258)
T ss_pred             chhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC------------cchhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            666    666666666677889999999764432111            12333333211            13789999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHc--CCCe-----eccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVR--KRPV-----PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~--~~~~-----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +||+.++++.....     +.....  +...     ..++.......+++++|+|+++..++..... ..|+.|++.+|.
T Consensus       181 ~~pg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        181 ICPGYVDTPLVRKQ-----IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             EecCCCcchhhhhh-----hhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            99999998754321     111111  1000     0111222345799999999999999976543 346889888763

>PRK09135 pteridine reductase; Provisional

Probab=98.49  E-value=1e-06  Score=70.52  Aligned_cols=125  Identities=14%  Similarity=0.135  Sum_probs=73.6

Q ss_pred             ceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h-
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N-   75 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~-   75 (255)
                      +.+++.|  +.++.++++++...   .-.+++.+|+.  .+.         .+.. +...|+.+|...+         + 
T Consensus       110 ~~~~~~n--~~g~~~l~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~-~~~~Y~~sK~~~~~~~~~l~~~~~  175 (249)
T PRK09135        110 DDLFASN--LKAPFFLSQAAAPQLRKQRGAIVNITDI--HAE---------RPLK-GYPVYCAAKAALEMLTRSLALELA  175 (249)
T ss_pred             HHHHHHh--chhHHHHHHHHHHHHhhCCeEEEEEeCh--hhc---------CCCC-CchhHHHHHHHHHHHHHHHHHHHC
Confidence            3344555  99999999999642   11345555542  211         1111 1245665554332         2 


Q ss_pred             -CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           76 -FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        76 -~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                       ++.++++||+.++|+.....+...+......+.++..         +.+++|+|+++..++.......|++|+++++..
T Consensus       176 ~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~  246 (249)
T PRK09135        176 PEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKR---------IGTPEDIAEAVRFLLADASFITGQILAVDGGRS  246 (249)
T ss_pred             CCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCC---------CcCHHHHHHHHHHHcCccccccCcEEEECCCee
Confidence             5899999999999997654332233333333332111         124799999997666543333478999999876


Q ss_pred             cC
Q 025270          155 VT  156 (255)
Q Consensus       155 ~s  156 (255)
                      ++
T Consensus       247 ~~  248 (249)
T PRK09135        247 LT  248 (249)
T ss_pred             cc
Confidence            54

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.48  E-value=7.6e-07  Score=71.84  Aligned_cols=133  Identities=8%  Similarity=0.011  Sum_probs=82.9

Q ss_pred             CcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCceEEEecC
Q 025270           17 NFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~~~ilRp~   85 (255)
                      |+.++.++++++    .+.+.++||++||...+.....        ..+..+|.+.+.++..       .++.+..+|||
T Consensus       108 n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg  179 (257)
T PRK07074        108 NLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGH--------PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPG  179 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCC--------cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeC
Confidence            367777777766    3455678999999653321110        1122244433333222       27899999999


Q ss_pred             cccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCccCHHHHHH
Q 025270           86 YMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAK  162 (255)
Q Consensus        86 ~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~s~~el~~  162 (255)
                      .++++.....  ....+...+...         ....++++++|++++++.++..... ..|+++++.++...+.+|+++
T Consensus       180 ~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~  250 (257)
T PRK07074        180 TVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMAR  250 (257)
T ss_pred             cCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhh
Confidence            9988753221  111222222111         1224689999999999999975332 346899999999899999999


Q ss_pred             HHHH
Q 025270          163 LCAQ  166 (255)
Q Consensus       163 ~i~~  166 (255)
                      .+.+
T Consensus       251 ~~~~  254 (257)
T PRK07074        251 TLTL  254 (257)
T ss_pred             hhcc
Confidence            8765

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.46  E-value=9e-07  Score=71.00  Aligned_cols=116  Identities=10%  Similarity=0.059  Sum_probs=72.9

Q ss_pred             cccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----H-------hhCCceEE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S-------ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~-------e~~~~~~i   81 (255)
                      +.++.++++++.    +.+.++||++||...++...           +....|+..|..     .       ..++++++
T Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~  183 (251)
T PRK12826        115 LTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY-----------PGLAHYAASKAGLVGFTRALALELAARNITVNS  183 (251)
T ss_pred             hHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC-----------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            777788888774    45677899999977652111           112345554432     1       23799999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +||+.++|+.........+...+..+.++         ..+++++|+|+++..++..... ..|++|++.+|.
T Consensus       184 i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        184 VHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             EeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            99999999864432111111112222111         1478999999999998876543 347999998775

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.44  E-value=6.4e-06  Score=66.95  Aligned_cols=138  Identities=20%  Similarity=0.194  Sum_probs=97.7

Q ss_pred             HHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCcHH
Q 025270           21 QRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE   98 (255)
Q Consensus        21 ~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~~~   98 (255)
                      ..++++++++.  ++++++++|....-...         +..+...+...|+.+.+.+++++++|+..+|.......   
T Consensus        85 ~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~---------~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~---  152 (275)
T COG0702          85 VTAVVRAAEAAGAGVKHGVSLSVLGADAAS---------PSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF---  152 (275)
T ss_pred             HHHHHHHHHHhcCCceEEEEeccCCCCCCC---------ccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH---
Confidence            34455555554  47778887775433211         11122367889999999999999999777776543321   


Q ss_pred             HHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCee
Q 025270           99 WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI  174 (255)
Q Consensus        99 ~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~  174 (255)
                       ....+..+.+....+.+  ..+++..+|++.++..++..+... +++|.+++++..+..++.+.+.+..|.+...
T Consensus       153 -~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~-~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         153 -IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             -HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhcCCccc-CcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence             22333344443333333  789999999999999999988644 5999999998999999999999999988777

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.40  E-value=2e-06  Score=70.15  Aligned_cols=133  Identities=17%  Similarity=0.145  Sum_probs=83.4

Q ss_pred             CcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceE
Q 025270           17 NFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~   80 (255)
                      |+.++.++++++.+    .+..+||++||...+....            ..+.|+.+|...+            .++.++
T Consensus       118 n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~  185 (276)
T PRK05875        118 NVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR------------WFGAYGVTKSAVDHLMKLAADELGPSWVRVN  185 (276)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            37888888877654    2345899999987654321            1134555554332            268999


Q ss_pred             EEecCcccCCCCCCCcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCcc---
Q 025270           81 SFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV---  155 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~---  155 (255)
                      ++||+.+.++....... ......+....         ....+++++|+|+++..++..+.. ..|+++++.++..+   
T Consensus       186 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~  256 (276)
T PRK05875        186 SIRPGLIRTDLVAPITESPELSADYRACT---------PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRG  256 (276)
T ss_pred             EEecCccCCccccccccCHHHHHHHHcCC---------CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCC
Confidence            99999887664322110 11111221111         112357799999999999987654 24689999988765   


Q ss_pred             -CHHHHHHHHHHHhCC
Q 025270          156 -TLDGMAKLCAQAAGL  170 (255)
Q Consensus       156 -s~~el~~~i~~~~g~  170 (255)
                       +..|+++.+.+..|.
T Consensus       257 ~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        257 PDFSSMLEPVFGADGL  272 (276)
T ss_pred             ccHHHHHHHHhhHHHH
Confidence             788888877765554

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.35  E-value=6.2e-06  Score=63.58  Aligned_cols=130  Identities=16%  Similarity=0.192  Sum_probs=82.5

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-hhCCceEEEecCcccCCCCCCC-
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-ENFSNWASFRPQYMIGSGNNKD-   95 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-e~~~~~~ilRp~~v~G~~~~~~-   95 (255)
                      -....+-+.+|+++||++|+|+|.. -||-..   +.   +--+...|..+|.-+. .+...-+++|||.+||.+.-.. 
T Consensus       139 g~ani~a~kaa~~~gv~~fvyISa~-d~~~~~---~i---~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~g~  211 (283)
T KOG4288|consen  139 GTANINAVKAAAKAGVPRFVYISAH-DFGLPP---LI---PRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVGGI  211 (283)
T ss_pred             cHhhHHHHHHHHHcCCceEEEEEhh-hcCCCC---cc---chhhhccchHHHHHHHHhcCCCceeeccceeecccccCcc
Confidence            4556677889999999999999963 222211   11   1112235666665443 3478999999999999854433 


Q ss_pred             -----cHHHHHHHHHcCC-----CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHH
Q 025270           96 -----CEEWFFDRIVRKR-----PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA  165 (255)
Q Consensus        96 -----~~~~~~~~~~~~~-----~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~  165 (255)
                           .+..-+.+..++.     .+++  -|....+.+.++++|.+.+.++++++-.  +        .+++.++.+.-.
T Consensus       212 ~~pL~~vg~pl~~~~~~a~k~~~kLp~--lg~l~~ppvnve~VA~aal~ai~dp~f~--G--------vv~i~eI~~~a~  279 (283)
T KOG4288|consen  212 KSPLHTVGEPLEMVLKFALKPLNKLPL--LGPLLAPPVNVESVALAALKAIEDPDFK--G--------VVTIEEIKKAAH  279 (283)
T ss_pred             cccHHhhhhhHHHHHHhhhchhhcCcc--cccccCCCcCHHHHHHHHHHhccCCCcC--c--------eeeHHHHHHHHH
Confidence                 1223333443332     1333  3566778999999999999999988641  2        356666665544


Q ss_pred             H
Q 025270          166 Q  166 (255)
Q Consensus       166 ~  166 (255)
                      +
T Consensus       280 k  280 (283)
T KOG4288|consen  280 K  280 (283)
T ss_pred             H
Confidence            3

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.34  E-value=3.2e-06  Score=68.32  Aligned_cols=115  Identities=10%  Similarity=0.063  Sum_probs=67.7

Q ss_pred             HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---hCCceEEEecCcccCCCCC
Q 025270           21 QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWASFRPQYMIGSGNN   93 (255)
Q Consensus        21 ~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~~~~~~ilRp~~v~G~~~~   93 (255)
                      +..++..+++.+..++|++||...++...         ..+..+|.+.+.+++    +   .++.+..++||.++++...
T Consensus       124 ~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  194 (260)
T PRK12823        124 CRAVLPHMLAQGGGAIVNVSSIATRGINR---------VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRR  194 (260)
T ss_pred             HHHHHHHHHhcCCCeEEEEcCccccCCCC---------CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchh
Confidence            34556666566667899999987664211         112223433333222    2   2899999999999987311


Q ss_pred             ------------CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           94 ------------KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        94 ------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                                  ......+......+.++.         -+.+.+|+|+++..++..... ..|+++++.+++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        195 VPRNAAPQSEQEKAWYQQIVDQTLDSSLMK---------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             hHHhhccccccccccHHHHHHHHhccCCcc---------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence                        001223333333332222         234789999999998875533 346889988765

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.31  E-value=4.9e-07  Score=73.84  Aligned_cols=142  Identities=13%  Similarity=0.015  Sum_probs=85.1

Q ss_pred             ccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            7 KFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .++.+++.|  +.++.++++++    ++.+.+++|++||...+.....            .+.|+..|...         
T Consensus       100 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------------~~~Y~~sKaa~~~~~~~la~  165 (275)
T PRK08263        100 EARAQIDTN--FFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM------------SGIYHASKWALEGMSEALAQ  165 (275)
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC------------ccHHHHHHHHHHHHHHHHHH
Confidence            344445555  77776666665    5567789999999776643211            24466555542         


Q ss_pred             ---hhCCceEEEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceee-eeHHHHHHHHHHHhcCCCcCCC
Q 025270           74 ---ENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNI-AHVRDLSSMLTLAVENPEAASS  144 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~-i~v~D~a~~~~~~l~~~~~~~~  144 (255)
                         .++++++++|||.+..+.....     .... ...+...     .........+ ++.+|++++++.+++.+... +
T Consensus       166 e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~p~dva~~~~~l~~~~~~~-~  238 (275)
T PRK08263        166 EVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA-YDTLREE-----LAEQWSERSVDGDPEAAAEALLKLVDAENPP-L  238 (275)
T ss_pred             HhhhhCcEEEEEecCCccCCccccccccCCCchh-hhhHHHH-----HHHHHHhccCCCCHHHHHHHHHHHHcCCCCC-e
Confidence               2489999999998876543211     0000 0111000     0001111234 78999999999999977653 2


Q ss_pred             CEEEecCCCccCHHHHHHHHHHHhC
Q 025270          145 NIFNLVSDRAVTLDGMAKLCAQAAG  169 (255)
Q Consensus       145 ~~~~i~~~~~~s~~el~~~i~~~~g  169 (255)
                      ..++..++..+++.++.+.+.+.-+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~  263 (275)
T PRK08263        239 RLFLGSGVLDLAKADYERRLATWEE  263 (275)
T ss_pred             EEEeCchHHHHHHHHHHHHHHHHHH
Confidence            4454445568899999998887533

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.26  E-value=2.7e-06  Score=67.60  Aligned_cols=106  Identities=11%  Similarity=0.156  Sum_probs=70.1

Q ss_pred             cccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHH-----HH-------hhCCceEE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-----IS-------ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~-----~~-------e~~~~~~i   81 (255)
                      ..++.++++++.    +.+++++|++||...++...            ....|...|.     +.       +.++.+.+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~  181 (239)
T PRK12828        114 VKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP------------GMGAYAAAKAGVARLTEALAAELLDRGITVNA  181 (239)
T ss_pred             chhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            778888887774    45678999999988765421            1133444432     21       23799999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +|||.++++.....                .+.  .....+++++|+|+++..++.+... ..|+.+++.++.
T Consensus       182 i~pg~v~~~~~~~~----------------~~~--~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        182 VLPSIIDTPPNRAD----------------MPD--ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             EecCcccCcchhhc----------------CCc--hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCE
Confidence            99999998732211                000  1112379999999999999986543 246888888775

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.26  E-value=5.5e-07  Score=72.69  Aligned_cols=137  Identities=12%  Similarity=0.069  Sum_probs=79.2

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCC-----cceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSG-----VKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~-----v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------   73 (255)
                      .++..++.|  +.++.++++++....     -.++|++||.. .++....        ..+..+|.+.+.+++       
T Consensus       103 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------~~Y~~sK~a~~~~~~~la~e~~  172 (257)
T PRK07067        103 SYDRLFAVN--VKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALV--------SHYCATKAAVISYTQSAALALI  172 (257)
T ss_pred             HHHHHHHhh--hhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCC--------chhhhhHHHHHHHHHHHHHHhc
Confidence            344455555  899999999886431     14799999954 3332110        112223433222222       


Q ss_pred             hhCCceEEEecCcccCCCCCCCcHHHHHHHHH---cCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           74 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV---RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        74 e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                      ..++++++++||.++++.....  ...+....   .+......+.+.....+++.+|+|+++..++..... ..|++|++
T Consensus       173 ~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v  250 (257)
T PRK07067        173 RHGINVNAIAPGVVDTPMWDQV--DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNV  250 (257)
T ss_pred             ccCeEEEEEeeCcccchhhhhh--hhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEee
Confidence            2389999999999998743221  00010000   000011122233445789999999999999986543 34799999


Q ss_pred             cCCCcc
Q 025270          150 VSDRAV  155 (255)
Q Consensus       150 ~~~~~~  155 (255)
                      .+|+.+
T Consensus       251 ~gg~~~  256 (257)
T PRK07067        251 DGGNWM  256 (257)
T ss_pred             cCCEeC
Confidence            988654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.25  E-value=6.2e-06  Score=69.73  Aligned_cols=127  Identities=17%  Similarity=0.169  Sum_probs=79.4

Q ss_pred             cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCC
Q 025270           16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKD   95 (255)
Q Consensus        16 ~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~   95 (255)
                      +...|+.|+++||+.+|++|++++||.+.-......+.... .......|+.+++++.+.+++++|+|++...-......
T Consensus       176 VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~-~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~  254 (411)
T KOG1203|consen  176 VDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLL-NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQR  254 (411)
T ss_pred             ecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhh-hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcc
Confidence            34789999999999999999999988665433222211111 01112367889999999999999999997654322211


Q ss_pred             cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           96 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        96 ~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      .      ......+....+++..  -.+...|+|+.++.++.+....+..+..++.
T Consensus       255 ~------~~~~~~~~~~~~~~~~--~~i~r~~vael~~~all~~~~~~~k~~~~v~  302 (411)
T KOG1203|consen  255 E------VVVDDEKELLTVDGGA--YSISRLDVAELVAKALLNEAATFKKVVELVL  302 (411)
T ss_pred             e------ecccCccccccccccc--eeeehhhHHHHHHHHHhhhhhccceeEEeec
Confidence            0      0011111111122221  3688899999999999988765324555543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.22  E-value=2.3e-06  Score=69.08  Aligned_cols=131  Identities=10%  Similarity=0.003  Sum_probs=75.7

Q ss_pred             ceEEecccCcccHHHHHHHHhh----CC-cceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHH----------
Q 025270            9 KALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYI----------   72 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~----------   72 (255)
                      +..++.|  +.++.++++++..    .+ -.++|++||.. .++...             ...|+.+|.+          
T Consensus       106 ~~~~~~n--~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~-------------~~~Y~~sKaa~~~l~~~la~  170 (259)
T PRK12384        106 DRSLQVN--LVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH-------------NSGYSAAKFGGVGLTQSLAL  170 (259)
T ss_pred             HHHHHhc--cHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC-------------CchhHHHHHHHHHHHHHHHH
Confidence            3344455  8887766666653    34 25899999854 343211             1234444432          


Q ss_pred             --HhhCCceEEEecCcccCCCCCCCcHHHHHHHHHc--CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           73 --SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        73 --~e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                        .+.++.+.++|||.++++......++.+......  +.....+.++.....+++.+|+++++..++.+... ..|++|
T Consensus       171 e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~  250 (259)
T PRK12384        171 DLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSI  250 (259)
T ss_pred             HHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceE
Confidence              1248999999999988765433222222211110  00011122233345688999999999998875533 346899


Q ss_pred             EecCCCc
Q 025270          148 NLVSDRA  154 (255)
Q Consensus       148 ~i~~~~~  154 (255)
                      ++.+|+.
T Consensus       251 ~v~~g~~  257 (259)
T PRK12384        251 NVTGGQV  257 (259)
T ss_pred             EEcCCEE
Confidence            9998763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.22  E-value=6.9e-06  Score=65.55  Aligned_cols=114  Identities=8%  Similarity=0.020  Sum_probs=70.5

Q ss_pred             cccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHH-----HH-------hhCCceEE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-----IS-------ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~-----~~-------e~~~~~~i   81 (255)
                      +.++.++++++.    +.++++||++||........            ....|...|.     +.       ..++.+++
T Consensus       114 ~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~  181 (246)
T PRK05653        114 LTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP------------GQTNYSAAKAGVIGFTKALALELASRGITVNA  181 (246)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            778888887774    45778999999965332111            0123343332     11       23789999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +||+.++|+....  +...........   +     ....+++.+|+++++..++..... ..|++|++.+|.
T Consensus       182 i~pg~~~~~~~~~--~~~~~~~~~~~~---~-----~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        182 VAPGFIDTDMTEG--LPEEVKAEILKE---I-----PLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             EEeCCcCCcchhh--hhHHHHHHHHhc---C-----CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            9999999976532  111111111111   1     114578999999999999975433 246899998875

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.21  E-value=1e-05  Score=64.97  Aligned_cols=124  Identities=12%  Similarity=0.116  Sum_probs=77.9

Q ss_pred             EEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----h---CCce
Q 025270           11 LFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----N---FSNW   79 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----~---~~~~   79 (255)
                      .++.|  +.++.++++++...    +.++||++||...|....          .+..+|.+.+.+++.    +   ++.+
T Consensus       113 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~Y~~sK~a~~~~~~~l~~~~~~~~i~v  180 (250)
T PRK07774        113 FMSVN--LDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSN----------FYGLAKVGLNGLTQQLARELGGMNIRV  180 (250)
T ss_pred             HHhhh--hHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCcc----------ccHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            34455  88888888888753    346899999987764210          112244443333322    2   6889


Q ss_pred             EEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCcc
Q 025270           80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  155 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~  155 (255)
                      ++++||.+..+.........+.+.+.++.+...         +.+++|+|++++.++..... ..|++|++.++..+
T Consensus       181 ~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        181 NAIAPGPIDTEATRTVTPKEFVADMVKGIPLSR---------MGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             EEEecCcccCccccccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            999999887765443222334444444433211         34689999999999886532 34689999988654

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.17  E-value=7.5e-06  Score=66.82  Aligned_cols=122  Identities=11%  Similarity=0.110  Sum_probs=70.2

Q ss_pred             EEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCce
Q 025270           11 LFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNW   79 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~~   79 (255)
                      .++.|  +.++.++++++.    +.+..+||++||...+......       ..+..+|.+.+.++.+       .++.+
T Consensus       114 ~~~~n--~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~-------~~Y~~sK~a~~~l~~~~~~~~~~~gi~v  184 (274)
T PRK07775        114 QVQIH--LVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHM-------GAYGAAKAGLEAMVTNLQMELEGTGVRA  184 (274)
T ss_pred             HHHHh--hHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCc-------chHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            34455  888888887765    3345679999998766532110       0112234443333322       27999


Q ss_pred             EEEecCcccCCC-CC--CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           80 ASFRPQYMIGSG-NN--KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        80 ~ilRp~~v~G~~-~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      +++|||.+.++. ..  ......++.....      ++ +.....+++++|+|++++.+++++..  +.+||+.
T Consensus       185 ~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~~~~~--~~~~~~~  249 (274)
T PRK07775        185 SIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAETPRG--AHVVNME  249 (274)
T ss_pred             EEEeCCcccCcccccCChhhhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhcCCCC--CCeeEEe
Confidence            999999875442 11  1111112211111      11 12235689999999999999987643  4677776

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.13  E-value=8.4e-06  Score=66.63  Aligned_cols=128  Identities=11%  Similarity=0.020  Sum_probs=74.2

Q ss_pred             EecccCcccHHHHHHHH----hhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCce
Q 025270           12 FRTNNNFRLQRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNW   79 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~   79 (255)
                      ++.|  +.++.++++++    ++.+.++||++||.. .++.....        .+..+|.+.+.++.       .+++++
T Consensus       109 ~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~--------~Y~~sK~~~~~~~~~l~~~~~~~~i~v  178 (280)
T PRK06914        109 FETN--VFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLS--------PYVSSKYALEGFSESLRLELKPFGIDV  178 (280)
T ss_pred             HHHh--hHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCc--------hhHHhHHHHHHHHHHHHHHhhhhCCEE
Confidence            3444  77777777775    556678999999964 44432111        11223444333332       238999


Q ss_pred             EEEecCcccCCCCCCC------------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEE
Q 025270           80 ASFRPQYMIGSGNNKD------------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  147 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  147 (255)
                      +++|||.+.++.....            .....+..+...    +   ......+++++|+|++++.+++++..  +..|
T Consensus       179 ~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~  249 (280)
T PRK06914        179 ALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH----I---NSGSDTFGNPIDVANLIVEIAESKRP--KLRY  249 (280)
T ss_pred             EEEecCCcccchhhccccccccccccccchHHHHHHHHHH----H---hhhhhccCCHHHHHHHHHHHHcCCCC--Cccc
Confidence            9999999987632210            001111111100    0   01123478999999999999998765  3578


Q ss_pred             EecCCCccCHH
Q 025270          148 NLVSDRAVTLD  158 (255)
Q Consensus       148 ~i~~~~~~s~~  158 (255)
                      +++++..+++.
T Consensus       250 ~~~~~~~~~~~  260 (280)
T PRK06914        250 PIGKGVKLMIL  260 (280)
T ss_pred             ccCCchHHHHH
Confidence            88876655444

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.08  E-value=1.3e-05  Score=64.19  Aligned_cols=125  Identities=14%  Similarity=0.097  Sum_probs=73.7

Q ss_pred             eEEecccCcccHHHHHHHHhhC------C-cceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---
Q 025270           10 ALFRTNNNFRLQRPVADWAKSS------G-VKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~------~-v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---   74 (255)
                      ..++.|  +.++.++++++...      + -.++|++||.. +++.....       ..+..+|.+.+.++.    +   
T Consensus       107 ~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~-------~~Y~~sKaa~~~~~~~la~~~~~  177 (248)
T PRK06123        107 RIFATN--VVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEY-------IDYAASKGAIDTMTIGLAKEVAA  177 (248)
T ss_pred             HHHHHH--hHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCc-------cchHHHHHHHHHHHHHHHHHhcc
Confidence            445555  88888888877642      1 13699999965 44432110       112334544444332    2   


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .+++++++||+.++++.......+..+.......++..         +.+++|+++++..++..... ..|++|++.++
T Consensus       178 ~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        178 EGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGR---------GGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             cCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            27999999999999985332222233333332222211         23689999999998876533 34688998765

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.04  E-value=1.8e-05  Score=63.61  Aligned_cols=121  Identities=12%  Similarity=0.092  Sum_probs=72.0

Q ss_pred             CcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~ilRp~~v   87 (255)
                      |+.++.++++++...  +..++|++||..++......       ..+..+|++.+.+..       ..++.+++++||.+
T Consensus       121 n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~-------~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~  193 (254)
T PRK12746        121 NIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGS-------IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYT  193 (254)
T ss_pred             HhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCC-------cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCc
Confidence            488888888888753  33589999998776432110       012224444433321       23799999999999


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           88 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        88 ~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++..........+.......        .....+++++|+|+++..++..... ..|++|++.++
T Consensus       194 ~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        194 KTDINAKLLDDPEIRNFATNS--------SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             cCcchhhhccChhHHHHHHhc--------CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            887432211001111111111        1122467899999999988876533 24689999876

>PRK06128 oxidoreductase; Provisional

Probab=98.04  E-value=3.5e-05  Score=63.80  Aligned_cols=127  Identities=11%  Similarity=0.077  Sum_probs=79.9

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      +.++..++.|  +.++.++++++...  .-.+||++||...|.....            ...|+.+|...         +
T Consensus       157 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~Y~asK~a~~~~~~~la~e  222 (300)
T PRK06128        157 EQFDATFKTN--VYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT------------LLDYASTKAAIVAFTKALAKQ  222 (300)
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC------------chhHHHHHHHHHHHHHHHHHH
Confidence            3455566666  99999999998753  1248999999887753221            12355444322         1


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+.+++||.+.++..... .....+..+....+         ...+.+.+|+|.++..++..... ..|+++++
T Consensus       223 l~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v  293 (300)
T PRK06128        223 VAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP---------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGV  293 (300)
T ss_pred             hhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHhCccccCccCcEEee
Confidence               389999999999998753221 11122222211111         12356889999999998876543 34689999


Q ss_pred             cCCCcc
Q 025270          150 VSDRAV  155 (255)
Q Consensus       150 ~~~~~~  155 (255)
                      .+|..+
T Consensus       294 ~gg~~~  299 (300)
T PRK06128        294 TGGLLL  299 (300)
T ss_pred             CCCEeC
Confidence            988644

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.03  E-value=2.1e-05  Score=62.89  Aligned_cols=127  Identities=11%  Similarity=0.075  Sum_probs=74.4

Q ss_pred             ceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhC
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENF   76 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~   76 (255)
                      +..+..|  +.++.++++++.+.    + .++||++||...+.....       ...+..+|.+.+.++.       ..+
T Consensus       102 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------~~~y~~sK~a~~~~~~~~a~~~~~~~  172 (245)
T PRK07060        102 DRVMAVN--ARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD-------HLAYCASKAALDAITRVLCVELGPHG  172 (245)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC-------CcHhHHHHHHHHHHHHHHHHHHhhhC
Confidence            3334445  88888888887653    2 368999999765533211       0111223333333222       127


Q ss_pred             CceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           77 SNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +.++.+||+.++++.....+ .......+...         .....+++++|+|+++..++..+.. ..|+++++.+|.
T Consensus       173 i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        173 IRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             eEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            99999999999987533211 01111111111         1123488999999999999986543 346888887664

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.02  E-value=3.2e-05  Score=61.91  Aligned_cols=122  Identities=10%  Similarity=0.009  Sum_probs=74.0

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------Hh
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------SE   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~e   74 (255)
                      ++..++.|  +.++.++++++..    .+..++|++||...+....            ....|..+|.+         .+
T Consensus       108 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~~  173 (247)
T PRK12935        108 WERVIDVN--LSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF------------GQTNYSAAKAGMLGFTKSLALE  173 (247)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC------------CCcchHHHHHHHHHHHHHHHHH
Confidence            34444555  8888888888863    3446899999965432111            11345554442         12


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                         .++.+++++||.+.++..... .......+..+         .....+.+++|++++++.+++......|+.||+.+
T Consensus       174 ~~~~~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~  243 (247)
T PRK12935        174 LAKTNVTVNAICPGFIDTEMVAEV-PEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGAYITGQQLNING  243 (247)
T ss_pred             HHHcCcEEEEEEeCCCcChhhhhc-cHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCC
Confidence               289999999999976532211 11111111111         12245789999999999999765323468999988


Q ss_pred             CC
Q 025270          152 DR  153 (255)
Q Consensus       152 ~~  153 (255)
                      +.
T Consensus       244 g~  245 (247)
T PRK12935        244 GL  245 (247)
T ss_pred             Cc
Confidence            74

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.02  E-value=1.5e-05  Score=64.19  Aligned_cols=125  Identities=13%  Similarity=0.113  Sum_probs=75.9

Q ss_pred             ceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----------   73 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----------   73 (255)
                      +..+..|  +.++.++++++.+.    +.+++|++||........            ....|+..|...           
T Consensus       112 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~------------~~~~y~~sK~a~~~~~~~~a~e~  177 (255)
T PRK07523        112 ERLLRTN--ISSVFYVGQAVARHMIARGAGKIINIASVQSALARP------------GIAPYTATKGAVGNLTKGMATDW  177 (255)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC------------CCccHHHHHHHHHHHHHHHHHHh
Confidence            3344455  88888888888743    567899999965432111            123455554322           


Q ss_pred             -hhCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 -ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 -e~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                       .+++++.++||+.+.++...... ...+...+....+         ...+...+|+|.+++.++..... ..|+++++.
T Consensus       178 ~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~  248 (255)
T PRK07523        178 AKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACVFLASDASSFVNGHVLYVD  248 (255)
T ss_pred             hHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEEC
Confidence             23899999999999887532211 1111112211111         12366899999999999976433 346889998


Q ss_pred             CCCccC
Q 025270          151 SDRAVT  156 (255)
Q Consensus       151 ~~~~~s  156 (255)
                      +|...|
T Consensus       249 gg~~~~  254 (255)
T PRK07523        249 GGITAS  254 (255)
T ss_pred             CCeecc
Confidence            876544

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.01  E-value=4.7e-05  Score=60.92  Aligned_cols=113  Identities=10%  Similarity=0.078  Sum_probs=71.5

Q ss_pred             CcccHHHHHHHHh-----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----H----h---hCCce
Q 025270           17 NFRLQRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S----E---NFSNW   79 (255)
Q Consensus        17 n~~~~~~ll~aa~-----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~----e---~~~~~   79 (255)
                      |..++.++++++.     +.+.+++|++||...+.....            ...|...|..     .    +   .++.+
T Consensus       118 n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~  185 (249)
T PRK12827        118 NLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG------------QVNYAASKAGLIGLTKTLANELAPRGITV  185 (249)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC------------CchhHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence            3889999999988     456678999999765532111            1334444432     1    1   38999


Q ss_pred             EEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +++|||.+.++........   ..+....+.         ..+.+.+|+++++..++..... .+|+++++.++.
T Consensus       186 ~~i~pg~v~t~~~~~~~~~---~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        186 NAVAPGAINTPMADNAAPT---EHLLNPVPV---------QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             EEEEECCcCCCcccccchH---HHHHhhCCC---------cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence            9999999998764432111   112211111         1245789999999998865433 346888887664

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.99  E-value=6.5e-05  Score=60.16  Aligned_cols=129  Identities=18%  Similarity=0.136  Sum_probs=74.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ++..++.|  +.++.++++++...  ...++|++||........    .+..   +..+.|+.+|...+           
T Consensus       102 ~~~~~~vn--~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~---~~~~~Y~~sK~a~e~~~~~l~~~~~  172 (248)
T PRK07806        102 EDYAMRLN--RDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTM---PEYEPVARSKRAGEDALRALRPELA  172 (248)
T ss_pred             cceeeEee--eHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCC---ccccHHHHHHHHHHHHHHHHHHHhh
Confidence            44556666  99999999999864  224899999954321111    0111   11245565554433           


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                       .++.+++++|+.+-++...     .+....   .+-.+.........+++++|+|++++.+++.... .|++|++++++
T Consensus       173 ~~~i~v~~v~pg~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~-~g~~~~i~~~~  243 (248)
T PRK07806        173 EKGIGFVVVSGDMIEGTVTA-----TLLNRL---NPGAIEARREAAGKLYTVSEFAAEVARAVTAPVP-SGHIEYVGGAD  243 (248)
T ss_pred             ccCeEEEEeCCccccCchhh-----hhhccC---CHHHHHHHHhhhcccCCHHHHHHHHHHHhhcccc-CccEEEecCcc
Confidence             2678888888766554211     111100   0000000000113689999999999999995533 36999999887


Q ss_pred             c
Q 025270          154 A  154 (255)
Q Consensus       154 ~  154 (255)
                      .
T Consensus       244 ~  244 (248)
T PRK07806        244 Y  244 (248)
T ss_pred             c
Confidence            4

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.99  E-value=1.5e-05  Score=63.91  Aligned_cols=117  Identities=9%  Similarity=0.013  Sum_probs=71.7

Q ss_pred             CcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h--CCceEEEe
Q 025270           17 NFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N--FSNWASFR   83 (255)
Q Consensus        17 n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~--~~~~~ilR   83 (255)
                      |+.++.++++++.+.  ...+||++||...+....            ..+.|+.+|...+         .  ++.+.+++
T Consensus       115 n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~  182 (252)
T PRK06077        115 DFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY------------GLSIYGAMKAAVINLTKYLALELAPKIRVNAIA  182 (252)
T ss_pred             hCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC------------CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            377878888877753  225799999987664211            2256666665432         2  67889999


Q ss_pred             cCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           84 PQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        84 p~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      ||.+.++.....  ...........  ..      .....+++++|+|++++.++..+.. .|++|++.++..
T Consensus       183 Pg~i~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~dva~~~~~~~~~~~~-~g~~~~i~~g~~  246 (252)
T PRK06077        183 PGFVKTKLGESLFKVLGMSEKEFAE--KF------TLMGKILDPEEVAEFVAAILKIESI-TGQVFVLDSGES  246 (252)
T ss_pred             eCCccChHHHhhhhcccccHHHHHH--hc------CcCCCCCCHHHHHHHHHHHhCcccc-CCCeEEecCCee
Confidence            999877632110  00000000010  01      1123589999999999999975543 368999998863

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.98  E-value=5.2e-05  Score=61.02  Aligned_cols=128  Identities=9%  Similarity=0.047  Sum_probs=74.2

Q ss_pred             ceEEecccCcccHHHHHHHHhhC-----C-----cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS-----G-----VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~-----~-----v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      +..++.|  +.++.++++++...     +     +++||++||...+......       ..+..+|.+.+.+++     
T Consensus       107 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------~~Y~~sK~a~~~~~~~l~~~  177 (256)
T PRK12745        107 DRVLAIN--LRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNR-------GEYCISKAGLSMAAQLFAAR  177 (256)
T ss_pred             HHHHHhc--chHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCC-------cccHHHHHHHHHHHHHHHHH
Confidence            3344555  88888888887542     1     5679999997654321110       011123333322221     


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        .++++++++|||.+.++..... ...+......+. .+       ...+.+.+|+++++..++..... ..|++|++.
T Consensus       178 ~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~~~~-~~-------~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~  248 (256)
T PRK12745        178 LAEEGIGVYEVRPGLIKTDMTAPV-TAKYDALIAKGL-VP-------MPRWGEPEDVARAVAALASGDLPYSTGQAIHVD  248 (256)
T ss_pred             HHHhCCEEEEEecCCCcCcccccc-chhHHhhhhhcC-CC-------cCCCcCHHHHHHHHHHHhCCcccccCCCEEEEC
Confidence              2479999999999988654321 112212111111 11       12467999999999998875433 346899998


Q ss_pred             CCCc
Q 025270          151 SDRA  154 (255)
Q Consensus       151 ~~~~  154 (255)
                      ++..
T Consensus       249 gg~~  252 (256)
T PRK12745        249 GGLS  252 (256)
T ss_pred             CCee
Confidence            8754

>PRK08324 short chain dehydrogenase; Validated

Probab=97.97  E-value=2.5e-05  Score=71.91  Aligned_cols=129  Identities=15%  Similarity=0.083  Sum_probs=76.3

Q ss_pred             EEecccCcccHHHHHHHHh----hCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270           11 LFRTNNNFRLQRPVADWAK----SSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~----~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      .++.|  +.++.++++++.    +.+. .+||++||...+....            ....|+.+|...+           
T Consensus       525 ~~~~N--~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~e~~  590 (681)
T PRK08324        525 SFDVN--ATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP------------NFGAYGAAKAAELHLVRQLALELG  590 (681)
T ss_pred             HHHHH--hHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC------------CcHHHHHHHHHHHHHHHHHHHHhc
Confidence            34444  777778866664    3343 6899999976442211            1245666554432           


Q ss_pred             -hCCceEEEecCccc-CCCCCCCcHHHHHHHHHcCCCe----eccCCCCcceeeeeHHHHHHHHHHHhcCC-CcCCCCEE
Q 025270           75 -NFSNWASFRPQYMI-GSGNNKDCEEWFFDRIVRKRPV----PIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIF  147 (255)
Q Consensus        75 -~~~~~~ilRp~~v~-G~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~~~~~~~  147 (255)
                       .++.+.+++|+.|| +........ ...+....+...    ..+.++...+.+++++|+|+++..++... ....|+++
T Consensus       591 ~~gIrvn~v~Pg~v~~~t~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i  669 (681)
T PRK08324        591 PDGIRVNGVNPDAVVRGSGIWTGEW-IEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAII  669 (681)
T ss_pred             ccCeEEEEEeCceeecCCccccchh-hhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEE
Confidence             16899999999998 554322110 001111122211    12334555677999999999999998532 22346899


Q ss_pred             EecCCCc
Q 025270          148 NLVSDRA  154 (255)
Q Consensus       148 ~i~~~~~  154 (255)
                      ++.+|..
T Consensus       670 ~vdgG~~  676 (681)
T PRK08324        670 TVDGGNA  676 (681)
T ss_pred             EECCCch
Confidence            9998864

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.93  E-value=3.6e-05  Score=62.19  Aligned_cols=125  Identities=10%  Similarity=0.002  Sum_probs=67.2

Q ss_pred             cccHHHHHHHHh----hCCc-ceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCceEEEec
Q 025270           18 FRLQRPVADWAK----SSGV-KQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRP   84 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v-~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~~~ilRp   84 (255)
                      +.++.++++++.    ..+. ++++++||... ++....        ..+..+|.+.+.++..       .++.++++||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~--------~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~p  190 (264)
T PRK12829        119 LNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGR--------TPYAASKWAVVGLVKSLAIELGPLGIRVNAILP  190 (264)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCC--------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence            777788777763    3444 67888887543 222111        0111123332322222       3789999999


Q ss_pred             CcccCCCCCCCcHHHHHHHHHcCCCe-ecc---CCCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEEEecCCC
Q 025270           85 QYMIGSGNNKDCEEWFFDRIVRKRPV-PIP---GSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDR  153 (255)
Q Consensus        85 ~~v~G~~~~~~~~~~~~~~~~~~~~~-~i~---~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~i~~~~  153 (255)
                      |.++|+..... ........  +... ...   ........+++++|+++++..++.... ..+|+.|++.++.
T Consensus       191 g~v~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        191 GIVRGPRMRRV-IEARAQQL--GIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCcCChHHHHH-hhhhhhcc--CCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            99999864321 11000000  0000 000   000111248999999999999886432 2346899999875

>PRK09186 flagellin modification protein A; Provisional

Probab=97.91  E-value=4.4e-05  Score=61.43  Aligned_cols=117  Identities=11%  Similarity=0.020  Sum_probs=66.0

Q ss_pred             HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceEEEecCccc
Q 025270           21 QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMI   88 (255)
Q Consensus        21 ~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~ilRp~~v~   88 (255)
                      ++.++..+++.+.+++|++||...+..... ...++.+.... ..|+.+|...+            .++.+++++||.++
T Consensus       125 ~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~  202 (256)
T PRK09186        125 SQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEGTSMTSP-VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGIL  202 (256)
T ss_pred             HHHHHHHHHhcCCceEEEEechhhhccccc-hhccccccCCc-chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEeccccc
Confidence            344555555566779999999664432211 11222222111 24555553322            27899999999887


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           89 GSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        89 G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ++...     .+........    +     ...+++.+|+|+++..++.+... .+|+.+.+.+|.
T Consensus       203 ~~~~~-----~~~~~~~~~~----~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        203 DNQPE-----AFLNAYKKCC----N-----GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             CCCCH-----HHHHHHHhcC----C-----ccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence            65311     1222211111    1     12378999999999999976543 345777776653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.91  E-value=5.2e-05  Score=60.77  Aligned_cols=121  Identities=9%  Similarity=0.001  Sum_probs=69.4

Q ss_pred             cccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEEecCc
Q 025270           18 FRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQY   86 (255)
Q Consensus        18 ~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~ilRp~~   86 (255)
                      +.++.++++++..    .+.++||++||...+......       ..+..+|.+.+.++.       +.++.++.++|+.
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~  186 (250)
T PRK08063        114 AKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENY-------TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGA  186 (250)
T ss_pred             hHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCc-------cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCc
Confidence            7777777777764    455699999996654321110       011123333333332       2378999999999


Q ss_pred             ccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCc
Q 025270           87 MIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  154 (255)
Q Consensus        87 v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~  154 (255)
                      +..+..... ....+........         ....+++.+|+|++++.++.++.. ..|+.+++.++..
T Consensus       187 v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        187 VDTDALKHFPNREELLEDARAKT---------PAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             ccCchhhhccCchHHHHHHhcCC---------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            976542211 0011111111111         012368999999999999986543 3468888887753

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.91  E-value=4.2e-05  Score=62.52  Aligned_cols=113  Identities=14%  Similarity=0.021  Sum_probs=64.1

Q ss_pred             EecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------h
Q 025270           12 FRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------N   75 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~   75 (255)
                      ++.|  +.++.++++++.    +.+.+++|++||.+.+....            ....|+..|...+            .
T Consensus       106 ~~~n--~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~  171 (277)
T PRK06180        106 FEVN--VFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP------------GIGYYCGSKFALEGISESLAKEVAPF  171 (277)
T ss_pred             HHHH--hHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC------------CcchhHHHHHHHHHHHHHHHHHhhhh
Confidence            4455  888888888853    44567899999976543211            1234555553221            3


Q ss_pred             CCceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           76 FSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      +++++++|||.+.++.....      ....+...............+   ..+..++|+|++++.+++.+..
T Consensus       172 gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dva~~~~~~l~~~~~  240 (277)
T PRK06180        172 GIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG---KQPGDPAKAAQAILAAVESDEP  240 (277)
T ss_pred             CcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---CCCCCHHHHHHHHHHHHcCCCC
Confidence            89999999999977542211      111111100000000000111   2356799999999999997754

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.90  E-value=6e-05  Score=61.60  Aligned_cols=140  Identities=12%  Similarity=0.058  Sum_probs=80.3

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------H
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------S   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~   73 (255)
                      ++..++.|  +.++.++++++.    +.+ ..++|++||...+...            +....|+.+|..         .
T Consensus       107 ~~~~~~~N--~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l~~  172 (275)
T PRK05876        107 WRWVIDVD--LWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN------------AGLGAYGVAKYGVVGLAETLAR  172 (275)
T ss_pred             HHHHHhhh--hHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC------------CCCchHHHHHHHHHHHHHHHHH
Confidence            34445555  888888888764    333 4689999997765321            122456666643         2


Q ss_pred             h---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           74 E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        74 e---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      |   .++.+++++||.+.++...... ................+......++++++|+|++++.+++++     +.+.+.
T Consensus       173 e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~-----~~~~~~  246 (275)
T PRK05876        173 EVTADGIGVSVLCPMVVETNLVANSE-RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN-----RLYVLP  246 (275)
T ss_pred             HhhhcCcEEEEEEeCccccccccchh-hhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC-----CeEEec
Confidence            2   2899999999998776432210 000000000111122333344567899999999999999865     334444


Q ss_pred             CCCccCHHHHHHHHHHHhC
Q 025270          151 SDRAVTLDGMAKLCAQAAG  169 (255)
Q Consensus       151 ~~~~~s~~el~~~i~~~~g  169 (255)
                      +  ......+.+...+...
T Consensus       247 ~--~~~~~~~~~~~~~~~~  263 (275)
T PRK05876        247 H--AASRASIRRRFERIDR  263 (275)
T ss_pred             C--hhhHHHHHHHHHHHHH
Confidence            3  2455556555555443

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.88  E-value=2.5e-05  Score=62.64  Aligned_cols=114  Identities=7%  Similarity=-0.028  Sum_probs=66.4

Q ss_pred             cccHHHHHHH----HhhCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHH-----Hh-------hCCceE
Q 025270           18 FRLQRPVADW----AKSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYI-----SE-------NFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~a----a~~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~e-------~~~~~~   80 (255)
                      +.++.++.++    +++.+.++||++||... ++...             ...|+..|..     ..       .+++++
T Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~  179 (252)
T PRK06138        113 VGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG-------------RAAYVASKGAIASLTRAMALDHATDGIRVN  179 (252)
T ss_pred             hhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC-------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence            6666555444    45567789999999754 33221             1334444432     21       279999


Q ss_pred             EEecCcccCCCCCCCc----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           81 SFRPQYMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++|||.++++......    .+..+.....+.        .....+++.+|++++++.++..+.. ..|..+.+.++
T Consensus       180 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        180 AVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             EEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            9999999887532210    011111111111        1112368899999999999987654 23567777655

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.87  E-value=0.00012  Score=58.58  Aligned_cols=120  Identities=11%  Similarity=0.024  Sum_probs=72.5

Q ss_pred             EEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h---
Q 025270           11 LFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e---   74 (255)
                      .++.|  +.++.++++++.    +.+.+++|++||...+.....            ...|...|.+.         +   
T Consensus       107 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~la~~~~~  172 (250)
T TIGR03206       107 LIAIN--LTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG------------EAVYAACKGGLVAFSKTMAREHAR  172 (250)
T ss_pred             HHHHH--hHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC------------CchHHHHHHHHHHHHHHHHHHHhH
Confidence            34445  788887777765    456678999999877654321            13455555321         2   


Q ss_pred             hCCceEEEecCcccCCCCCCC----cH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 NFSNWASFRPQYMIGSGNNKD----CE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~----~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                      .+++++++|||.++++.....    .. ..+...+....+         ...+...+|+|+++..++..+.. ..|++++
T Consensus       173 ~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~  243 (250)
T TIGR03206       173 HGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP---------LGRLGQPDDLPGAILFFSSDDASFITGQVLS  243 (250)
T ss_pred             hCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccCCCcCcEEE
Confidence            279999999999988742210    00 011112221111         11245679999999999876543 3468999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.++.
T Consensus       244 ~~~g~  248 (250)
T TIGR03206       244 VSGGL  248 (250)
T ss_pred             eCCCc
Confidence            88763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=97.84  E-value=6.9e-05  Score=59.88  Aligned_cols=119  Identities=12%  Similarity=0.100  Sum_probs=66.4

Q ss_pred             cccHHHHHHHHhhC-------CcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEE
Q 025270           18 FRLQRPVADWAKSS-------GVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASF   82 (255)
Q Consensus        18 ~~~~~~ll~aa~~~-------~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~il   82 (255)
                      +.++.++++++...       +..+||++||... ++....       ...+..+|.+.+.++.       +.+++++++
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~-------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i  184 (247)
T PRK09730        112 VTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE-------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCV  184 (247)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc-------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEE
Confidence            77776666555432       1246999999754 332211       0112234444433322       238999999


Q ss_pred             ecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ||+.+|++.......+..........+..         -..+.+|+|+++..++..... ..|+++.+.++
T Consensus       185 ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        185 RPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             EeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            99999998643322222222232222211         123689999999998875432 33567777654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.84  E-value=4.7e-05  Score=61.12  Aligned_cols=130  Identities=8%  Similarity=-0.047  Sum_probs=71.0

Q ss_pred             ceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----------
Q 025270            9 KALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----------   73 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----------   73 (255)
                      +..++.|  +.++.++++++..    .+..++|++||........            ..+.|+.+|...           
T Consensus       101 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~  166 (252)
T PRK08220        101 QQTFAVN--AGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI------------GMAAYGASKAALTSLAKCVGLEL  166 (252)
T ss_pred             HHHHHHh--hHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC------------CCchhHHHHHHHHHHHHHHHHHh
Confidence            3344444  7777788877743    3445899999965432111            113344444322           


Q ss_pred             -hhCCceEEEecCcccCCCCCCCcHHHHH-HHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 -ENFSNWASFRPQYMIGSGNNKDCEEWFF-DRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 -e~~~~~~ilRp~~v~G~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                       .+++.+.+++||.++++........... .....+.. ...........+++++|+|++++.++..... ..|+++.+.
T Consensus       167 ~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~  245 (252)
T PRK08220        167 APYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFP-EQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVD  245 (252)
T ss_pred             hHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHH-HHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEEC
Confidence             2479999999999988753221000000 00000000 0000111223578999999999998875432 345777777


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +|.
T Consensus       246 gg~  248 (252)
T PRK08220        246 GGA  248 (252)
T ss_pred             CCe
Confidence            664

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=97.83  E-value=0.00012  Score=58.05  Aligned_cols=112  Identities=9%  Similarity=0.110  Sum_probs=67.8

Q ss_pred             cccHHHHHHHHhh----CCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHH-----H----H---hhCCceE
Q 025270           18 FRLQRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKY-----I----S---ENFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~~----~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~-----~----~---e~~~~~~   80 (255)
                      +.++.++++++..    .+.++||++||.+ +++....             ..|...|.     +    .   ..++.++
T Consensus       108 ~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~-------------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~  174 (239)
T TIGR01830       108 LTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ-------------ANYAASKAGVIGFTKSLAKELASRNITVN  174 (239)
T ss_pred             hHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC-------------chhHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            7888888888764    4566899999964 5553221             23443332     1    1   1389999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++||+.+.++.... ....+...+....+.         .-+.+++|+++++..++..... ..|++||+.++
T Consensus       175 ~i~pg~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       175 AVAPGFIDTDMTDK-LSEKVKKKILSQIPL---------GRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             EEEECCCCChhhhh-cChHHHHHHHhcCCc---------CCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            99999886643221 112222222222111         1256789999999988865432 34689998765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.82  E-value=0.00014  Score=59.85  Aligned_cols=125  Identities=9%  Similarity=0.041  Sum_probs=74.6

Q ss_pred             EEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---hCCceEE
Q 025270           11 LFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWAS   81 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~~~~~~i   81 (255)
                      .++.|  +.++.++++++...  ...++|++||...|......       ..+..+|.+.+.+++    +   .++++..
T Consensus       152 ~~~~N--~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~-------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~  222 (290)
T PRK06701        152 TFKTN--IYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL-------IDYSATKGAIHAFTRSLAQSLVQKGIRVNA  222 (290)
T ss_pred             HHhhh--hHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc-------chhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            44445  88999999988753  22589999998877542211       111223333222221    1   2799999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ++||.++.+..........+.....         ......+.+.+|+|++++.++..... ..|.++++.++.
T Consensus       223 i~pG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        223 VAPGPIWTPLIPSDFDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             EecCCCCCcccccccCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            9999998864322111112222211         11123468899999999999986543 346888888764

>PRK06194 hypothetical protein; Provisional

Probab=97.79  E-value=0.00011  Score=60.16  Aligned_cols=123  Identities=12%  Similarity=0.015  Sum_probs=74.3

Q ss_pred             cceEEecccCcccHHHHHHH----HhhCCc------ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            8 FKALFRTNNNFRLQRPVADW----AKSSGV------KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~a----a~~~~v------~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      ++..++.|  +.++.+++++    +.+.+.      .++|++||.+.+....            ....|+.+|...+   
T Consensus       107 ~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~  172 (287)
T PRK06194        107 WEWVLGVN--LWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP------------AMGIYNVSKHAVVSLT  172 (287)
T ss_pred             HHHHHhhc--cHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC------------CCcchHHHHHHHHHHH
Confidence            34445555  7777776655    333332      5899999977664321            1134555554432   


Q ss_pred             ------hC-----CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCC
Q 025270           75 ------NF-----SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  143 (255)
Q Consensus        75 ------~~-----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  143 (255)
                            ++     +.+..+.|+.+..+          +.....+.+..+.+++.+.++|++++|++..+....       
T Consensus       173 ~~l~~e~~~~~~~irv~~v~pg~i~t~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  235 (287)
T PRK06194        173 ETLYQDLSLVTDQVGASVLCPYFVPTG----------IWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSG-------  235 (287)
T ss_pred             HHHHHHHhhcCCCeEEEEEEeCcccCc----------cccccccCchhcccCccccchhhHHHHHHHhhhhcc-------
Confidence                  22     44455555544322          223334555667777888899999999887653210       


Q ss_pred             CCEEEecCCCccCHHHHHHHHHHHhCCC
Q 025270          144 SNIFNLVSDRAVTLDGMAKLCAQAAGLP  171 (255)
Q Consensus       144 ~~~~~i~~~~~~s~~el~~~i~~~~g~~  171 (255)
                                .++..|+++.+.+.++..
T Consensus       236 ----------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        236 ----------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             ----------CCCHHHHHHHHHHHHHcC
Confidence                      179999999999877543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.78  E-value=7.3e-05  Score=59.88  Aligned_cols=121  Identities=8%  Similarity=0.053  Sum_probs=69.3

Q ss_pred             EEecccCcccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------h
Q 025270           11 LFRTNNNFRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------E   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e   74 (255)
                      .++.|  +.++.++++.    +++.+.++||++||...+.....            ...|+..|...            .
T Consensus       109 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~y~~sk~~~~~~~~~~a~~~~~  174 (251)
T PRK07231        109 IFAVN--VKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG------------LGWYNASKGAVITLTKALAAELGP  174 (251)
T ss_pred             HHhhh--hHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC------------chHHHHHHHHHHHHHHHHHHHhhh
Confidence            34444  6655555544    44466789999999876643221            13344444321            1


Q ss_pred             hCCceEEEecCcccCCCCCCCcH---HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCE---EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                      .+++++.++||.+-++.......   .........+         .....+++++|+|.+++.++..... ..|..+.+.
T Consensus       175 ~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  245 (251)
T PRK07231        175 DKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIANAALFLASDEASWITGVTLVVD  245 (251)
T ss_pred             hCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEEC
Confidence            27899999999886653222100   0111111111         1123468999999999999976543 345777777


Q ss_pred             CCCc
Q 025270          151 SDRA  154 (255)
Q Consensus       151 ~~~~  154 (255)
                      ++..
T Consensus       246 gg~~  249 (251)
T PRK07231        246 GGRC  249 (251)
T ss_pred             CCcc
Confidence            6643

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.68  E-value=0.00029  Score=56.14  Aligned_cols=113  Identities=9%  Similarity=0.078  Sum_probs=67.5

Q ss_pred             cccHHHHHHHHhh----CCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHH------------HhhCCceE
Q 025270           18 FRLQRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~~----~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e~~~~~~   80 (255)
                      +.++.++++++..    .+.++||++||.. +++...             ...|...|..            ...++.++
T Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~-------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~  181 (248)
T PRK05557        115 LTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG-------------QANYAASKAGVIGFTKSLARELASRGITVN  181 (248)
T ss_pred             hHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC-------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            7777777777764    3567899999954 444322             1234433322            12378999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ++|||.+.++.... ....+........+         ...+.+.+|+++++..++..... ..|+.|++.++.
T Consensus       182 ~v~pg~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        182 AVAPGFIETDMTDA-LPEDVKEAILAQIP---------LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             EEecCccCCccccc-cChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            99999875543222 12222222222221         11256899999999988875322 346899998764

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00024  Score=56.28  Aligned_cols=114  Identities=11%  Similarity=0.088  Sum_probs=66.5

Q ss_pred             cccHHHH----HHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEE
Q 025270           18 FRLQRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~l----l~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~i   81 (255)
                      +.++.++    +.++++.+.+++|++||...|+...             ...|..+|...            ..++.+++
T Consensus       100 ~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~  166 (234)
T PRK07577        100 VRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD-------------RTSYSAAKSALVGCTRTWALELAEYGITVNA  166 (234)
T ss_pred             hHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC-------------chHHHHHHHHHHHHHHHHHHHHHhhCcEEEE
Confidence            5555555    4445556777999999987765422             13455444332            23899999


Q ss_pred             EecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +|||.+..+.....  ........+....+         .......+|+|.+++.++..+.. ..|+.+.+.++.
T Consensus       167 i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        167 VAPGPIETELFRQTRPVGSEEEKRVLASIP---------MRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             EecCcccCcccccccccchhHHHHHhhcCC---------CCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence            99999877642211  00111112222111         01134789999999999976533 346788777654

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.0002  Score=57.37  Aligned_cols=116  Identities=9%  Similarity=-0.001  Sum_probs=69.7

Q ss_pred             CcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceE
Q 025270           17 NFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~   80 (255)
                      |+.++.++++++...    +..+||++||...+.....            ...|..+|...+            .++.+.
T Consensus       115 n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~  182 (250)
T PRK12939        115 NVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK------------LGAYVASKGAVIGMTRSLARELGGRGITVN  182 (250)
T ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC------------cchHHHHHHHHHHHHHHHHHHHhhhCEEEE
Confidence            377787888777542    3448999999665432111            123444443221            378999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .++||.+..+.........+......+         .....+++++|+|+++..++..... ..|+.+.+.++.
T Consensus       183 ~v~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        183 AIAPGLTATEATAYVPADERHAYYLKG---------RALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             EEEECCCCCccccccCChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            999998876643221111222222221         1223478999999999999986543 346888888764

>PRK06182 short chain dehydrogenase; Validated

Probab=97.64  E-value=0.00011  Score=59.79  Aligned_cols=127  Identities=9%  Similarity=-0.022  Sum_probs=68.6

Q ss_pred             cceEEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            8 FKALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      ++.+++.|  +.+    +..++..+++.+..++|++||.+.+....            ....|..+|...          
T Consensus        98 ~~~~~~~n--~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l~~e  163 (273)
T PRK06182         98 ARRQFEVN--LFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP------------LGAWYHATKFALEGFSDALRLE  163 (273)
T ss_pred             HHHHHhHH--hHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC------------CccHhHHHHHHHHHHHHHHHHH
Confidence            44455555  555    56666677777777999999965321111            112344444332          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCe--------eccCCCCcceeeeeHHHHHHHHHHHhcCCCcCC
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV--------PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  143 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~--------~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  143 (255)
                        ..+++++++|||.+.++.....  ...+.....+...        ...........+.+.+|+|++++.++.....  
T Consensus       164 ~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~--  239 (273)
T PRK06182        164 VAPFGIDVVVIEPGGIKTEWGDIA--ADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARRP--  239 (273)
T ss_pred             hcccCCEEEEEecCCcccccchhh--hhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCC--
Confidence              2389999999999987643210  0000000000000        0000111123467999999999999986543  


Q ss_pred             CCEEEecCC
Q 025270          144 SNIFNLVSD  152 (255)
Q Consensus       144 ~~~~~i~~~  152 (255)
                      ...|+++.+
T Consensus       240 ~~~~~~g~~  248 (273)
T PRK06182        240 KTRYAVGFG  248 (273)
T ss_pred             CceeecCcc
Confidence            256766644

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.62  E-value=0.00039  Score=55.65  Aligned_cols=121  Identities=10%  Similarity=0.010  Sum_probs=70.9

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEecc-ccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------Hh-
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISS-AGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------SE-   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss-~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~e-   74 (255)
                      ++..++.|  +.++.++++++...  ...++|++|| .+.++...             ...|+..|..         .+ 
T Consensus       104 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~-------------~~~Y~~sK~a~~~~~~~la~e~  168 (249)
T PRK06500        104 FDRSFNTN--VKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN-------------SSVYAASKAALLSLAKTLSGEL  168 (249)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC-------------ccHHHHHHHHHHHHHHHHHHHh
Confidence            34445555  89999999999742  2246777776 44554321             1345555543         22 


Q ss_pred             --hCCceEEEecCcccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 --NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                        .++++.++|||.++++....     .....+.+.+..+.++.         -+...+|+|+++..++..... ..|..
T Consensus       169 ~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~~~~~~~~g~~  239 (249)
T PRK06500        169 LPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAKAVLYLASDESAFIVGSE  239 (249)
T ss_pred             hhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHcCccccCccCCe
Confidence              27899999999999873211     11222333333332211         134789999999998875443 23466


Q ss_pred             EEecCC
Q 025270          147 FNLVSD  152 (255)
Q Consensus       147 ~~i~~~  152 (255)
                      +.+.+|
T Consensus       240 i~~~gg  245 (249)
T PRK06500        240 IIVDGG  245 (249)
T ss_pred             EEECCC
Confidence            666554

>PRK07985 oxidoreductase; Provisional

Probab=97.59  E-value=0.00046  Score=56.94  Aligned_cols=125  Identities=10%  Similarity=0.056  Sum_probs=76.7

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      ..++..++.|  +.++.++++++...  .-.++|++||...+.....            ...|+.+|...         +
T Consensus       151 ~~~~~~~~~N--~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~------------~~~Y~asKaal~~l~~~la~e  216 (294)
T PRK07985        151 EQFQKTFAIN--VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH------------LLDYAATKAAILNYSRGLAKQ  216 (294)
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC------------cchhHHHHHHHHHHHHHHHHH
Confidence            3445556666  99999999888753  1248999999877643211            13455555432         2


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++++..++||.|.++..... ........+...  .++       ..+...+|+|.++..++..... ..|+++.+
T Consensus       217 l~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~r~~~pedva~~~~fL~s~~~~~itG~~i~v  287 (294)
T PRK07985        217 VAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQ--TPM-------KRAGQPAELAPVYVYLASQESSYVTAEVHGV  287 (294)
T ss_pred             HhHhCcEEEEEECCcCccccccccCCCHHHHHHHhcc--CCC-------CCCCCHHHHHHHHHhhhChhcCCccccEEee
Confidence               389999999999998753211 111111121111  111       1245789999999999876543 34678887


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       288 dgG~  291 (294)
T PRK07985        288 CGGE  291 (294)
T ss_pred             CCCe
Confidence            7764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=97.59  E-value=0.00043  Score=55.20  Aligned_cols=121  Identities=12%  Similarity=0.085  Sum_probs=71.8

Q ss_pred             eEEecccCcccHHHH----HHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------
Q 025270           10 ALFRTNNNFRLQRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------   73 (255)
Q Consensus        10 ~~~~~~~n~~~~~~l----l~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------   73 (255)
                      .+++.|  +.++.++    ++.+++.+..+||++||...+....            ....|..+|...            
T Consensus       106 ~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~~~~  171 (245)
T PRK12824        106 DVINTN--LNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF------------GQTNYSAAKAGMIGFTKALASEGA  171 (245)
T ss_pred             HHHHHH--hHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC------------CChHHHHHHHHHHHHHHHHHHHHH
Confidence            334444  6776666    4555666677999999976553221            113455555321            


Q ss_pred             hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           74 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        74 e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ..++.+++++|+.+.++..... .......+....+         ...+...+|+++++..++..... ..|+++++.++
T Consensus       172 ~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12824        172 RYGITVNCIAPGYIATPMVEQM-GPEVLQSIVNQIP---------MKRLGTPEEIAAAVAFLVSEAAGFITGETISINGG  241 (245)
T ss_pred             HhCeEEEEEEEcccCCcchhhc-CHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence            2378999999999987643321 1122222222111         12245689999999988865433 34789999887


Q ss_pred             Cc
Q 025270          153 RA  154 (255)
Q Consensus       153 ~~  154 (255)
                      ..
T Consensus       242 ~~  243 (245)
T PRK12824        242 LY  243 (245)
T ss_pred             ee
Confidence            53

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=97.58  E-value=0.00054  Score=55.18  Aligned_cols=122  Identities=9%  Similarity=0.089  Sum_probs=73.0

Q ss_pred             eEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270           10 ALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ..++.|  +.++.++++++.    +.+..++|++||........            ....|+..|.+.+           
T Consensus       113 ~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~~~~  178 (255)
T PRK06113        113 RAYELN--VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI------------NMTSYASSKAAASHLVRNMAFDLG  178 (255)
T ss_pred             HHHHHh--hhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC------------CcchhHHHHHHHHHHHHHHHHHhh
Confidence            334455  889888988886    33445899999965432111            1134555554322           


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                       .++.+.++.||.+-.+.......+.+...+....+         ...+...+|+++++..++..... .+|+++++.++
T Consensus       179 ~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        179 EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP---------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             hhCeEEEEEecccccccccccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence             26889999999886553222111222222222211         11256889999999999975433 35788998887


Q ss_pred             Cc
Q 025270          153 RA  154 (255)
Q Consensus       153 ~~  154 (255)
                      ..
T Consensus       250 ~~  251 (255)
T PRK06113        250 GV  251 (255)
T ss_pred             cc
Confidence            53

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.57  E-value=0.00059  Score=54.43  Aligned_cols=121  Identities=12%  Similarity=0.067  Sum_probs=70.6

Q ss_pred             ceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------   74 (255)
                      +..++.|  +.++.++++++...  ...++|++||...+....            ....|+..|...+            
T Consensus       108 ~~~~~~n--~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~a~~~~~  173 (245)
T PRK12937        108 DRTIATN--LRGAFVVLREAARHLGQGGRIINLSTSVIALPLP------------GYGPYAASKAAVEGLVHVLANELRG  173 (245)
T ss_pred             HHHHhhh--chHHHHHHHHHHHHhccCcEEEEEeeccccCCCC------------CCchhHHHHHHHHHHHHHHHHHhhh
Confidence            3344455  88888988888653  224899999865442211            1234554443322            


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++.++.++||.+-.+.............+....++.         -+.+.+|+++++..++..... ..|+++++.++
T Consensus       174 ~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        174 RGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE---------RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             cCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            2788999999987655321111122233333322211         144779999999999976543 34678888754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.57  E-value=0.00063  Score=54.88  Aligned_cols=117  Identities=10%  Similarity=0.043  Sum_probs=70.7

Q ss_pred             cccHHHHHHHHhhC-----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceE
Q 025270           18 FRLQRPVADWAKSS-----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~~~-----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~   80 (255)
                      +.++.++++++...     +.++||++||...+......        .+....|..+|.+.+            +++.+.
T Consensus       121 ~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~--------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~  192 (259)
T PRK08213        121 VRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE--------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVN  192 (259)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEE
Confidence            88899999987653     56789999997654322110        011244555554322            278899


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      +++|+.+-.+.... ..+.+...+..+.+...         +...+|+++++..++..... .+|+.+++.++
T Consensus       193 ~v~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        193 AIAPGFFPTKMTRG-TLERLGEDLLAHTPLGR---------LGDDEDLKGAALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             EEecCcCCCcchhh-hhHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            99998886543221 23334444433332222         34579999998888875543 35677777765

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.00019  Score=57.77  Aligned_cols=127  Identities=9%  Similarity=0.056  Sum_probs=70.6

Q ss_pred             ceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCc
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSN   78 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~   78 (255)
                      +..++.|  +.++..+++++...   ..++||++||...+.....       ...+..+|.+.+.+++.       .+++
T Consensus       108 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~  178 (258)
T PRK07890        108 RAVIELN--VLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK-------YGAYKMAKGALLAASQSLATELGPQGIR  178 (258)
T ss_pred             HHHHHhh--hHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC-------cchhHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            3344445  88888888888752   2248999999765432111       01112233333332222       2799


Q ss_pred             eEEEecCcccCCCCCCC----------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEE
Q 025270           79 WASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIF  147 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~  147 (255)
                      +.++|||.++++.....          ............         .....+.+++|+++++..++.... ...|+++
T Consensus       179 v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i  249 (258)
T PRK07890        179 VNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPTDDEVASAVLFLASDLARAITGQTL  249 (258)
T ss_pred             EEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCCHHHHHHHHHHHcCHhhhCccCcEE
Confidence            99999999999753211          001111111111         111236789999999999987543 2335666


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      .+.++.
T Consensus       250 ~~~gg~  255 (258)
T PRK07890        250 DVNCGE  255 (258)
T ss_pred             EeCCcc
Confidence            666554

>PRK07069 short chain dehydrogenase; Validated

Probab=97.53  E-value=0.00027  Score=56.62  Aligned_cols=112  Identities=11%  Similarity=0.094  Sum_probs=66.5

Q ss_pred             cHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----H----h---h--CCceEEEecC
Q 025270           20 LQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S----E---N--FSNWASFRPQ   85 (255)
Q Consensus        20 ~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~----e---~--~~~~~ilRp~   85 (255)
                      ++..++.++++.+.++||++||...+.....            ...|+.+|..     +    +   .  ++.+..++|+
T Consensus       117 ~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg  184 (251)
T PRK07069        117 GCKHALPYLRASQPASIVNISSVAAFKAEPD------------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPT  184 (251)
T ss_pred             HHHHHHHHHhhcCCcEEEEecChhhccCCCC------------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeec
Confidence            7788888888877789999999876643221            1234544432     2    1   1  3788999999


Q ss_pred             cccCCCCCCCc----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           86 YMIGSGNNKDC----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        86 ~v~G~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .+.++......    .......+.++.         ....+.+.+|++++++.++..... .+|+.+.+.++
T Consensus       185 ~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        185 FIRTGIVDPIFQRLGEEEATRKLARGV---------PLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             ccCCcchhHHhhhccchhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            98877533210    001111111111         112345789999999998775433 34566666544

>PRK08017 oxidoreductase; Provisional

Probab=97.50  E-value=0.0002  Score=57.58  Aligned_cols=103  Identities=15%  Similarity=0.108  Sum_probs=61.0

Q ss_pred             cccHHH----HHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEE
Q 025270           18 FRLQRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~----ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~i   81 (255)
                      +.++.+    +++++++.+.+++|++||...+....            ....|+.+|...            ..++++++
T Consensus       106 ~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~  173 (256)
T PRK08017        106 FFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP------------GRGAYAASKYALEAWSDALRMELRHSGIKVSL  173 (256)
T ss_pred             hHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence            555544    47777777778999999964332111            123455554322            23789999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCC-CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      +|||.+..+.         ...+..+. .......+...+.+++.+|+++++..+++++..
T Consensus       174 v~pg~~~t~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  225 (256)
T PRK08017        174 IEPGPIRTRF---------TDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP  225 (256)
T ss_pred             EeCCCcccch---------hhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence            9998765432         11111111 111222233345679999999999999987754

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.00079  Score=54.12  Aligned_cols=119  Identities=9%  Similarity=-0.040  Sum_probs=72.2

Q ss_pred             EEecccCcccHHHHHHHHhh----CCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h--
Q 025270           11 LFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E--   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e--   74 (255)
                      .++.|  +.++.++++++..    .+.++||++||... ++...             ...|+.+|...         +  
T Consensus       116 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------~~~Y~~sK~a~~~~~~~la~e~~  180 (255)
T PRK06841        116 TIDIN--LKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER-------------HVAYCASKAGVVGMTKVLALEWG  180 (255)
T ss_pred             HHHHh--cHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC-------------CchHHHHHHHHHHHHHHHHHHHH
Confidence            44445  8888888888764    35678999999653 33211             13455554432         2  


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                       .++.+..++||.+-.+.....+..........+.         ....+.+.+|+|++++.++..... ..|+++.+.+|
T Consensus       181 ~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        181 PYGITVNAISPTVVLTELGKKAWAGEKGERAKKLI---------PAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGG  251 (255)
T ss_pred             hhCeEEEEEEeCcCcCcccccccchhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence             2799999999988765432211111111111111         112367999999999999986544 35688888776


Q ss_pred             C
Q 025270          153 R  153 (255)
Q Consensus       153 ~  153 (255)
                      .
T Consensus       252 ~  252 (255)
T PRK06841        252 Y  252 (255)
T ss_pred             c
Confidence            5

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00041  Score=56.07  Aligned_cols=105  Identities=14%  Similarity=0.100  Sum_probs=65.1

Q ss_pred             EecccCcccHHHHHHHHhh---CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hC
Q 025270           12 FRTNNNFRLQRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NF   76 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~   76 (255)
                      ++.|  +.++.++++++..   .+..++|++||...+....            ....|+..|...+            .+
T Consensus       107 ~~~N--~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~  172 (263)
T PRK06181        107 MRVN--YLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP------------TRSGYAASKHALHGFFDSLRIELADDG  172 (263)
T ss_pred             HHHh--hHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC------------CccHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            4445  8888999888853   2346899999977664221            1245666655322            37


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                      +.+++++||.+..+.....     ..  ..+..  ....+.....+++++|+|+++..+++..
T Consensus       173 i~~~~i~pg~v~t~~~~~~-----~~--~~~~~--~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        173 VAVTVVCPGFVATDIRKRA-----LD--GDGKP--LGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             ceEEEEecCccccCcchhh-----cc--ccccc--cccccccccCCCCHHHHHHHHHHHhhCC
Confidence            8999999998876532210     00  01111  1111222346899999999999999864

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00033  Score=55.15  Aligned_cols=107  Identities=12%  Similarity=0.084  Sum_probs=59.7

Q ss_pred             HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----C-CceEEEecCcccCCCCCC
Q 025270           21 QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----F-SNWASFRPQYMIGSGNNK   94 (255)
Q Consensus        21 ~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----~-~~~~ilRp~~v~G~~~~~   94 (255)
                      +.++++++++.+ +++|++||...++.....       ..+..+|++.+.++...     . +++..++||.+.++... 
T Consensus       110 ~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~-------~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-  180 (227)
T PRK08219        110 TRLLLPALRAAH-GHVVFINSGAGLRANPGW-------GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR-  180 (227)
T ss_pred             HHHHHHHHHhCC-CeEEEEcchHhcCcCCCC-------chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh-
Confidence            566666666554 589999997766432210       01112333333322221     4 78888888866543211 


Q ss_pred             CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           95 DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        95 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                              .+..+..     .......+++++|++++++.+++++..  +.++++.-
T Consensus       181 --------~~~~~~~-----~~~~~~~~~~~~dva~~~~~~l~~~~~--~~~~~~~~  222 (227)
T PRK08219        181 --------GLVAQEG-----GEYDPERYLRPETVAKAVRFAVDAPPD--AHITEVVV  222 (227)
T ss_pred             --------hhhhhhc-----cccCCCCCCCHHHHHHHHHHHHcCCCC--CccceEEE
Confidence                    1111100     001123579999999999999987654  46777653

>PRK07041 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.00059  Score=53.96  Aligned_cols=123  Identities=15%  Similarity=0.107  Sum_probs=72.1

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----h-----CC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----N-----FS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----~-----~~   77 (255)
                      ++.+++.|  +.++.+++++....+..++|++||...+....            ..+.|+..|...+     .     ++
T Consensus        93 ~~~~~~~n--~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~~~i  158 (230)
T PRK07041         93 AQAAMDSK--FWGAYRVARAARIAPGGSLTFVSGFAAVRPSA------------SGVLQGAINAALEALARGLALELAPV  158 (230)
T ss_pred             HHHHHHHH--HHHHHHHHhhhhhcCCeEEEEECchhhcCCCC------------cchHHHHHHHHHHHHHHHHHHHhhCc
Confidence            34444555  88888888866655667999999987764321            1244665554432     1     56


Q ss_pred             ceEEEecCcccCCCCCC---CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           78 NWASFRPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      .++.++|+.+-.+....   .....++.......+  .       ..+...+|+|+++..++.... ..|++|++.+|..
T Consensus       159 rv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dva~~~~~l~~~~~-~~G~~~~v~gg~~  228 (230)
T PRK07041        159 RVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--A-------RRVGQPEDVANAILFLAANGF-TTGSTVLVDGGHA  228 (230)
T ss_pred             eEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhcCCC-cCCcEEEeCCCee
Confidence            78888888774432110   000111122221111  1       113467999999999998543 3468999888764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.40  E-value=0.00082  Score=53.80  Aligned_cols=122  Identities=11%  Similarity=0.076  Sum_probs=69.5

Q ss_pred             EEecccCcccHHHHHHHHh----hC-CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCc
Q 025270           11 LFRTNNNFRLQRPVADWAK----SS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSN   78 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~----~~-~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~   78 (255)
                      +++.|  +.++.+++.++.    +. .-.++|++||...++....        ..+..+|.+.+.++.       ..+++
T Consensus       118 ~~~~n--~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~--------~~Y~~sK~a~~~l~~~la~~~~~~~i~  187 (253)
T PRK08217        118 VIDVN--LTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQ--------TNYSASKAGVAAMTVTWAKELARYGIR  187 (253)
T ss_pred             HHhhh--hHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCC--------chhHHHHHHHHHHHHHHHHHHHHcCcE
Confidence            33444  666665554333    22 2246999999877654221        111123333332221       23799


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      ++.++|+.+.++.... ..+........+.+         ...+.+.+|+|+++..++... ..+|+++++.++.
T Consensus       188 v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~~~~-~~~g~~~~~~gg~  251 (253)
T PRK08217        188 VAAIAPGVIETEMTAA-MKPEALERLEKMIP---------VGRLGEPEEIAHTVRFIIEND-YVTGRVLEIDGGL  251 (253)
T ss_pred             EEEEeeCCCcCccccc-cCHHHHHHHHhcCC---------cCCCcCHHHHHHHHHHHHcCC-CcCCcEEEeCCCc
Confidence            9999999998765432 22233333322221         123568899999999999753 3347899988764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.40  E-value=0.0013  Score=52.75  Aligned_cols=120  Identities=8%  Similarity=0.036  Sum_probs=70.1

Q ss_pred             EEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----h-------
Q 025270           11 LFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----E-------   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----e-------   74 (255)
                      .++.|  +.++.++++++.    +.+..++|++||......     ..       +...|+.+|.+.     .       
T Consensus       114 ~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----~~-------~~~~Y~~sK~a~~~l~~~la~~~~~  179 (253)
T PRK08642        114 QLEGS--VKGALNTIQAALPGMREQGFGRIINIGTNLFQNP-----VV-------PYHDYTTAKAALLGLTRNLAAELGP  179 (253)
T ss_pred             HHhhh--hhHHHHHHHHHHHHHHhcCCeEEEEECCccccCC-----CC-------CccchHHHHHHHHHHHHHHHHHhCc
Confidence            45555  888888888885    344568999998543211     10       113455555433     2       


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .++.+..++||.+-.+.............+...  .++       ..+.+.+|+++++..++..... ..|+.+.+.++.
T Consensus       180 ~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        180 YGITVNMVSGGLLRTTDASAATPDEVFDLIAAT--TPL-------RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             cCeEEEEEeecccCCchhhccCCHHHHHHHHhc--CCc-------CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            268899999998865422111111122222111  111       2378999999999999985433 456788777653

>PLN02253 xanthoxin dehydrogenase

Probab=97.39  E-value=0.00043  Score=56.58  Aligned_cols=135  Identities=10%  Similarity=-0.046  Sum_probs=73.3

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----CcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++.+++.|  +.++.++++++...    +-.++|++||.. .++....        ..+..+|.+.+.++..       
T Consensus       119 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~--------~~Y~~sK~a~~~~~~~la~e~~~  188 (280)
T PLN02253        119 EFEKVFDVN--VKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--------HAYTGSKHAVLGLTRSVAAELGK  188 (280)
T ss_pred             HHHHHHhHh--hHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC--------cccHHHHHHHHHHHHHHHHHhhh
Confidence            344555666  88888888877632    234788888755 3432111        0122233333332222       


Q ss_pred             hCCceEEEecCcccCCCCCCC-----cHHHHHHH---HHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKD-----CEEWFFDR---IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~---~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                      .++.+..++||.+..+.....     .....+..   ..... ..+      ....++.+|+|+++..++..... ..|+
T Consensus       189 ~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l------~~~~~~~~dva~~~~~l~s~~~~~i~G~  261 (280)
T PLN02253        189 HGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKN-ANL------KGVELTVDDVANAVLFLASDEARYISGL  261 (280)
T ss_pred             cCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcC-CCC------cCCCCCHHHHHHHHHhhcCcccccccCc
Confidence            278999999999876532110     00011111   00100 001      01247899999999999875443 3468


Q ss_pred             EEEecCCCccCHH
Q 025270          146 IFNLVSDRAVTLD  158 (255)
Q Consensus       146 ~~~i~~~~~~s~~  158 (255)
                      .+++.+|...+..
T Consensus       262 ~i~vdgG~~~~~~  274 (280)
T PLN02253        262 NLMIDGGFTCTNH  274 (280)
T ss_pred             EEEECCchhhccc
Confidence            8888877644443

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.38  E-value=0.00087  Score=49.90  Aligned_cols=76  Identities=21%  Similarity=0.239  Sum_probs=55.9

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCc-eEEEecCc
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-WASFRPQY   86 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~-~~ilRp~~   86 (255)
                      .|..+.+.  ..-...++++|++.||++|+.+||.+.-...         ..-+...|=..|+-+.|..++ ++|+|||.
T Consensus       100 adgfykvD--hDyvl~~A~~AKe~Gck~fvLvSS~GAd~sS---------rFlY~k~KGEvE~~v~eL~F~~~~i~RPG~  168 (238)
T KOG4039|consen  100 ADGFYKVD--HDYVLQLAQAAKEKGCKTFVLVSSAGADPSS---------RFLYMKMKGEVERDVIELDFKHIIILRPGP  168 (238)
T ss_pred             cCceEeec--hHHHHHHHHHHHhCCCeEEEEEeccCCCccc---------ceeeeeccchhhhhhhhccccEEEEecCcc
Confidence            34455555  6678889999999999999999996544322         222334666788888888775 78999999


Q ss_pred             ccCCCCCC
Q 025270           87 MIGSGNNK   94 (255)
Q Consensus        87 v~G~~~~~   94 (255)
                      +.|.....
T Consensus       169 ll~~R~es  176 (238)
T KOG4039|consen  169 LLGERTES  176 (238)
T ss_pred             eecccccc
Confidence            99976544

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.00095  Score=53.61  Aligned_cols=124  Identities=12%  Similarity=0.103  Sum_probs=72.9

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ++.+++.|  +.++..+++++...  +..++|++||...+....            ....|+.+|...+           
T Consensus       112 ~~~~~~vN--~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~la~e~~  177 (252)
T PRK12747        112 FDRMVSVN--AKAPFFIIQQALSRLRDNSRIINISSAATRISLP------------DFIAYSMTKGAINTMTFTLAKQLG  177 (252)
T ss_pred             HHHHHHHh--hhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC------------CchhHHHHHHHHHHHHHHHHHHHh
Confidence            34445555  88888888877653  224899999986553211            1134555554322           


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                       .++.+..+.||.|.++..................        .....+.+.+|+|+++..++..... ..|+++.+.+|
T Consensus       178 ~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        178 ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------CcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence             2799999999999876432110000111111100        0112367899999999998875433 34677777765


Q ss_pred             C
Q 025270          153 R  153 (255)
Q Consensus       153 ~  153 (255)
                      .
T Consensus       250 ~  250 (252)
T PRK12747        250 S  250 (252)
T ss_pred             c
Confidence            3

>PRK09242 tropinone reductase; Provisional

Probab=97.31  E-value=0.0022  Score=51.59  Aligned_cols=129  Identities=8%  Similarity=0.164  Sum_probs=72.3

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hh
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------EN   75 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~   75 (255)
                      .++..++.|  +.++.++++++.    +.+..++|++||...+......       ..+..+|.+.+.++.       ..
T Consensus       111 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-------~~Y~~sK~a~~~~~~~la~e~~~~  181 (257)
T PRK09242        111 EWRGIFETN--LFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSG-------APYGMTKAALLQMTRNLAVEWAED  181 (257)
T ss_pred             HHHHHHhhh--hHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCC-------cchHHHHHHHHHHHHHHHHHHHHh
Confidence            344445555  888888877774    3455789999997665432111       011123333222222       13


Q ss_pred             CCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           76 FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ++.+..++||.+.++..... ....+........++         .-+...+|++.++..++..... ..|+.+.+.++.
T Consensus       182 ~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        182 GIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             CeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcccccccCCEEEECCCe
Confidence            79999999999987753321 111222222222111         1134678999999998875433 346777776553

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.29  E-value=0.0016  Score=52.13  Aligned_cols=127  Identities=13%  Similarity=0.093  Sum_probs=70.8

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~   75 (255)
                      ++..++.|  +.+..++++++..    .+ ..++|++||...+......       ..+..+|.+.+.+++    +   .
T Consensus       104 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------~~Y~~sKaa~~~~~~~la~e~~~~  174 (248)
T TIGR01832       104 WDDVMNVN--LKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV-------PSYTASKHGVAGLTKLLANEWAAK  174 (248)
T ss_pred             HHHHHhhh--hHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC-------chhHHHHHHHHHHHHHHHHHhCcc
Confidence            34445555  8888888887753    23 4689999998776532111       011223333222221    2   2


Q ss_pred             CCceEEEecCcccCCCCCCCcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           76 FSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++.+..++||.+..+....... ..........    ++     ...++..+|+|+++..++..... ..|+++.+.+|
T Consensus       175 gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       175 GINVNAIAPGYMATNNTQALRADEDRNAAILER----IP-----AGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             CcEEEEEEECcCcCcchhccccChHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence            7999999999997764221100 0011111111    11     13478999999999999975443 23566666554

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.29  E-value=0.0023  Score=51.08  Aligned_cols=122  Identities=16%  Similarity=0.117  Sum_probs=69.6

Q ss_pred             cceEEecccCcccHHH----HHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            8 FKALFRTNNNFRLQRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~----ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      ++.+++.|  +.++.+    ++..+.+.+..++|++||........            ....|...|.+.          
T Consensus       105 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~y~~sK~a~~~~~~~l~~~  170 (246)
T PRK12938        105 WTAVIDTN--LTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF------------GQTNYSTAKAGIHGFTMSLAQE  170 (246)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC------------CChhHHHHHHHHHHHHHHHHHH
Confidence            34444555  666444    44555556677999999964321110            124455555421          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        ..++.+..++||.+.++.... ..+..+..+....+         ...+...+|+++++..++..... ..|+.+.+.
T Consensus       171 ~~~~gi~v~~i~pg~~~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~  240 (246)
T PRK12938        171 VATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWLASEESGFSTGADFSLN  240 (246)
T ss_pred             hhhhCeEEEEEEecccCCchhhh-cChHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCcccCCccCcEEEEC
Confidence              137899999999987764321 11222222222211         11245789999999998875433 346778777


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      ++.
T Consensus       241 ~g~  243 (246)
T PRK12938        241 GGL  243 (246)
T ss_pred             Ccc
Confidence            653

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0027  Score=51.22  Aligned_cols=128  Identities=9%  Similarity=0.078  Sum_probs=71.6

Q ss_pred             cceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++.+++    ++.+..++|++||...+....           +....|+..|...+         
T Consensus       103 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~~a~~  169 (260)
T PRK06523        103 WQDELNLN--LLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP-----------ESTTAYAAAKAALSTYSKSLSKE  169 (260)
T ss_pred             HHHHHhHh--hHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC-----------CCcchhHHHHHHHHHHHHHHHHH
Confidence            33444455  77776665544    445556899999976543211           01234555544321         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHH-----------HHHHHHHcC-CCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEE-----------WFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~-----------~~~~~~~~~-~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                         .++.+.+++||.+..+.... ...           .....+... ...+       ...+...+|+|+++..++...
T Consensus       170 ~~~~gi~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~va~~~~~l~s~~  241 (260)
T PRK06523        170 VAPKGVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIP-------LGRPAEPEEVAELIAFLASDR  241 (260)
T ss_pred             HhhcCcEEEEEecCcccCccHHH-HHHHHHhhcCCCHHHHHHHHHHHhccCc-------cCCCCCHHHHHHHHHHHhCcc
Confidence               27999999999998774321 000           000111100 0011       112457899999999998754


Q ss_pred             Cc-CCCCEEEecCCCccC
Q 025270          140 EA-ASSNIFNLVSDRAVT  156 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~~~s  156 (255)
                      .. ..|+.+.+.+|...|
T Consensus       242 ~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        242 AASITGTEYVIDGGTVPT  259 (260)
T ss_pred             cccccCceEEecCCccCC
Confidence            33 446888888876544

>PRK05717 oxidoreductase; Validated

Probab=97.23  E-value=0.0022  Score=51.57  Aligned_cols=123  Identities=10%  Similarity=0.076  Sum_probs=71.6

Q ss_pred             cceEEecccCcccHHHHHHHHhh---CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~   75 (255)
                      ++.+++.|  +.++.++++++..   ....++|++||...+....            ..+.|+..|...+         +
T Consensus       110 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~la~~~  175 (255)
T PRK05717        110 WNRVLAVN--LTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP------------DTEAYAASKGGLLALTHALAISL  175 (255)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC------------CCcchHHHHHHHHHHHHHHHHHh
Confidence            34455566  9999999999963   1235799999876442211            1134555553322         2


Q ss_pred             --CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           76 --FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        76 --~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                        ++.+..++||.+.++.........+ .......   .+     ...+.+.+|+|.++..++..... ..|+++.+.++
T Consensus       176 ~~~i~v~~i~Pg~i~t~~~~~~~~~~~-~~~~~~~---~~-----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        176 GPEIRVNAVSPGWIDARDPSQRRAEPL-SEADHAQ---HP-----AGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             cCCCEEEEEecccCcCCccccccchHH-HHHHhhc---CC-----CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence              5788999999998865322111111 1111111   11     11367889999999988875432 24577777655


Q ss_pred             C
Q 025270          153 R  153 (255)
Q Consensus       153 ~  153 (255)
                      .
T Consensus       247 ~  247 (255)
T PRK05717        247 M  247 (255)
T ss_pred             c
Confidence            3

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0024  Score=51.46  Aligned_cols=123  Identities=13%  Similarity=0.143  Sum_probs=73.1

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++...    +-.++|++||...+...            |....|+.+|...+         
T Consensus       111 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~------------p~~~~Y~~sK~a~~~~~~~la~~  176 (258)
T PRK09134        111 WDRHMATN--LRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN------------PDFLSYTLSKAALWTATRTLAQA  176 (258)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            34445555  88888888887753    23578888875544321            11134666664322         


Q ss_pred             h--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC
Q 025270           75 N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  152 (255)
Q Consensus        75 ~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~  152 (255)
                      .  .+.+..++||.+.......  ...+ .....+.+   .+      ...+++|+|++++.+++.+.. .|+.+++.++
T Consensus       177 ~~~~i~v~~i~PG~v~t~~~~~--~~~~-~~~~~~~~---~~------~~~~~~d~a~~~~~~~~~~~~-~g~~~~i~gg  243 (258)
T PRK09134        177 LAPRIRVNAIGPGPTLPSGRQS--PEDF-ARQHAATP---LG------RGSTPEEIAAAVRYLLDAPSV-TGQMIAVDGG  243 (258)
T ss_pred             hcCCcEEEEeecccccCCcccC--hHHH-HHHHhcCC---CC------CCcCHHHHHHHHHHHhcCCCc-CCCEEEECCC
Confidence            1  3788999999886543211  1112 22222211   11      136799999999999986543 4688988887


Q ss_pred             CccCH
Q 025270          153 RAVTL  157 (255)
Q Consensus       153 ~~~s~  157 (255)
                      ..+++
T Consensus       244 ~~~~~  248 (258)
T PRK09134        244 QHLAW  248 (258)
T ss_pred             eeccc
Confidence            64444

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0011  Score=53.41  Aligned_cols=116  Identities=9%  Similarity=0.074  Sum_probs=66.5

Q ss_pred             cccHHHHHHHHhh---CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEEE
Q 025270           18 FRLQRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASF   82 (255)
Q Consensus        18 ~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~il   82 (255)
                      +.+..++.+++..   .+..+||++||...+....            ....|+.+|...            ..++.+..+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v  181 (258)
T PRK08628        114 LIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAV  181 (258)
T ss_pred             hHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            7777777777653   2336899999966442211            113455444322            237999999


Q ss_pred             ecCcccCCCCCCCc-----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           83 RPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        83 Rp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +||.++++......     .......+...  ++.   +   ..++..+|+|+++..++..... ..|+.+.+.++.
T Consensus       182 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~---~---~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        182 IPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL---G---HRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             ecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc---c---ccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence            99999987422100     00011111111  010   1   1367889999999999986533 345777776554

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0022  Score=50.87  Aligned_cols=108  Identities=11%  Similarity=-0.011  Sum_probs=65.8

Q ss_pred             CcccHHHHHHHHhh---CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------------HhhCCceEE
Q 025270           17 NFRLQRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e~~~~~~i   81 (255)
                      |+.++.++++++..   .+.+++|++||...+....            ....|..+|+.            ...++++++
T Consensus       113 n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~  180 (237)
T PRK07326        113 NLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVST  180 (237)
T ss_pred             ccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            37777788777754   2456899999976443211            11345544431            223899999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCcc
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  155 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~  155 (255)
                      +||+.+..+......          ..         .....+..+|++++++.++..+....+..+.+..+.+.
T Consensus       181 v~pg~~~t~~~~~~~----------~~---------~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~~~~~  235 (237)
T PRK07326        181 IMPGSVATHFNGHTP----------SE---------KDAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRPSRPP  235 (237)
T ss_pred             EeeccccCccccccc----------ch---------hhhccCCHHHHHHHHHHHHhCCccccccceEEecCCCC
Confidence            999988665322100          00         00013678999999999999887644455666655443

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.17  E-value=0.0024  Score=51.37  Aligned_cols=120  Identities=11%  Similarity=0.105  Sum_probs=68.9

Q ss_pred             eEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----H----h--
Q 025270           10 ALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S----E--   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~----e--   74 (255)
                      ..++.|  +.++.++++++.    +.+.++||++||...+.....            ...|+..|..     .    +  
T Consensus       114 ~~~~~n--~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~la~e~~  179 (256)
T PRK06124        114 ALLETD--LVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG------------DAVYPAAKQGLTGLMRALAAEFG  179 (256)
T ss_pred             HHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC------------ccHhHHHHHHHHHHHHHHHHHHH
Confidence            334445  777677775554    356678999999664322111            1234443322     1    1  


Q ss_pred             -hCCceEEEecCcccCCCCCCCcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                       .++.+..++||.+.++....... ..+...+....  +.       ..+++.+|++++++.++..... ..|+.+.+.+
T Consensus       180 ~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dg  250 (256)
T PRK06124        180 PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRT--PL-------GRWGRPEEIAGAAVFLASPAASYVNGHVLAVDG  250 (256)
T ss_pred             HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcC--CC-------CCCCCHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence             27999999999998875322111 11111222111  11       1368999999999999987643 3456666655


Q ss_pred             C
Q 025270          152 D  152 (255)
Q Consensus       152 ~  152 (255)
                      +
T Consensus       251 g  251 (256)
T PRK06124        251 G  251 (256)
T ss_pred             C
Confidence            4

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.13  E-value=0.0014  Score=52.52  Aligned_cols=108  Identities=13%  Similarity=-0.016  Sum_probs=59.1

Q ss_pred             EEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------
Q 025270           11 LFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------   74 (255)
Q Consensus        11 ~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------   74 (255)
                      .++.|  +.+    +..++.++++.+.+++|++||...+....            ....|+..|...+            
T Consensus       102 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~~~~~~~~~l~~~~~~  167 (248)
T PRK10538        102 MIDTN--NKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA------------GGNVYGATKAFVRQFSLNLRTDLHG  167 (248)
T ss_pred             HHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCC------------CCchhHHHHHHHHHHHHHHHHHhcC
Confidence            34444  666    44555555666777999999965432110            1134554443322            


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      .++.+.+++||.+.|..........-....  .   ..+ .   ...++..+|+|++++.++..+..
T Consensus       168 ~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~---~~~-~---~~~~~~~~dvA~~~~~l~~~~~~  225 (248)
T PRK10538        168 TAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--E---KTY-Q---NTVALTPEDVSEAVWWVATLPAH  225 (248)
T ss_pred             CCcEEEEEeCCeecccccchhhccCcHHHH--H---hhc-c---ccCCCCHHHHHHHHHHHhcCCCc
Confidence            268999999999986542211000000000  0   000 0   11346899999999999976643

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0057  Score=49.17  Aligned_cols=126  Identities=10%  Similarity=0.020  Sum_probs=70.8

Q ss_pred             ccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            7 KFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .++..++.|  +.++..++.++    ++.+..++|++||...+......          ....|..+|...         
T Consensus       109 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------~~~~Y~~sKaa~~~l~~~la~  176 (254)
T PRK06114        109 QWQTVMDIN--LTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL----------LQAHYNASKAGVIHLSKSLAM  176 (254)
T ss_pred             HHHHHHhhc--chhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC----------CcchHHHHHHHHHHHHHHHHH
Confidence            344555566  77776665554    34445689999996643211110          013455555421         


Q ss_pred             ---hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           74 ---ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         ..++++.+++||.+..+.............+....  ++       .-+...+|++.+++.++..... ..|+++.+
T Consensus       177 e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~--p~-------~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~  247 (254)
T PRK06114        177 EWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQT--PM-------QRMAKVDEMVGPAVFLLSDAASFCTGVDLLV  247 (254)
T ss_pred             HHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHcCccccCcCCceEEE
Confidence               23799999999999776432211111111111111  11       1245789999999998875433 35678877


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       248 dgg~  251 (254)
T PRK06114        248 DGGF  251 (254)
T ss_pred             CcCE
Confidence            7664

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.07  E-value=0.0034  Score=49.77  Aligned_cols=128  Identities=10%  Similarity=0.101  Sum_probs=71.9

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---hC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NF   76 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~~   76 (255)
                      ++.+++.|  +.++.++++++..    .+..++|++||...+......       ..+..+|.+.+.+..    +   .+
T Consensus        92 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------~~Y~~sK~a~~~~~~~la~~~~~~g  162 (235)
T PRK06550         92 WQHIFDTN--LTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGG-------AAYTASKHALAGFTKQLALDYAKDG  162 (235)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCC-------cccHHHHHHHHHHHHHHHHHhhhcC
Confidence            33445555  8888888887753    344589999997654221110       111223433222221    2   27


Q ss_pred             CceEEEecCcccCCCCCCCcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           77 SNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +++++++||.+.++.....+. ......+....+         ...+...+|+|++++.++..... ..|.++.+.+|.
T Consensus       163 i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        163 IQVFGIAPGAVKTPMTAADFEPGGLADWVARETP---------IKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             eEEEEEeeCCccCcccccccCchHHHHHHhccCC---------cCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            999999999998775332211 111122222211         12256789999999999975432 345777776653

>PRK12744 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0018  Score=52.18  Aligned_cols=132  Identities=10%  Similarity=0.064  Sum_probs=70.1

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccc--cccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-------C
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSA--GIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-------F   76 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~--~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-------~   76 (255)
                      ++..++.|  +.++..+++++...  ...++++++|+  +.+...         ...+..+|.+.+.++...       +
T Consensus       113 ~~~~~~~N--~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~---------~~~Y~~sK~a~~~~~~~la~e~~~~~  181 (257)
T PRK12744        113 YDEMFAVN--SKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPF---------YSAYAGSKAPVEHFTRAASKEFGARG  181 (257)
T ss_pred             HHHHHhhh--hhHHHHHHHHHHHhhccCCCEEEEecchhcccCCC---------cccchhhHHHHHHHHHHHHHHhCcCc
Confidence            33444455  88888888888753  12356665332  332210         011223555544444332       6


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      +.++.++||.+..+..........   ...... .....+.....+.+.+|+|.++..++.......|+++++.+|..
T Consensus       182 i~v~~v~pg~v~t~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        182 ISVTAVGPGPMDTPFFYPQEGAEA---VAYHKT-AAALSPFSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGGYT  255 (257)
T ss_pred             eEEEEEecCccccchhccccccch---hhcccc-cccccccccCCCCCHHHHHHHHHHhhcccceeecceEeecCCcc
Confidence            899999999987653221100000   000000 00011111224789999999999999853223468898887753

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.07  E-value=0.0046  Score=49.73  Aligned_cols=124  Identities=10%  Similarity=0.054  Sum_probs=69.7

Q ss_pred             cceEEecccCcccH----HHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQ----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~----~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++    ..++..+++.+..++|++||...++....           ....|+.+|.+.+         
T Consensus       103 ~~~~~~~n--~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~-----------~~~~Y~asKaa~~~~~~~la~e  169 (255)
T PRK06463        103 YNKMIKIN--LNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE-----------GTTFYAITKAGIIILTRRLAFE  169 (255)
T ss_pred             HHHHHhHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC-----------CccHhHHHHHHHHHHHHHHHHH
Confidence            33444555  7774    55555555555568999999876642110           1134555554322         


Q ss_pred             ---hCCceEEEecCcccCCCCCC----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 ---NFSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                         .++.+..++||.+-.+....    .....+...+....         ....+...+|+|++++.++..... ..|+.
T Consensus       170 ~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  240 (255)
T PRK06463        170 LGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT---------VLKTTGKPEDIANIVLFLASDDARYITGQV  240 (255)
T ss_pred             hhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---------CcCCCcCHHHHHHHHHHHcChhhcCCCCCE
Confidence               27899999999874432111    00011111111111         112346789999999999876543 34688


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +.+.+|.
T Consensus       241 ~~~dgg~  247 (255)
T PRK06463        241 IVADGGR  247 (255)
T ss_pred             EEECCCe
Confidence            8887765

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.06  E-value=0.0046  Score=49.21  Aligned_cols=125  Identities=6%  Similarity=0.048  Sum_probs=68.2

Q ss_pred             ceEEecccCcccHHHHHHHHhh----CCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHH-------HhhC
Q 025270            9 KALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYI-------SENF   76 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-------~e~~   76 (255)
                      +..++.|  +.++.++++++..    .+.++||++||.. .++.....        .+..+|.+...++       ...+
T Consensus       105 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~--------~Y~~sk~a~~~~~~~la~~~~~~~  174 (245)
T PRK12936        105 DSVLEVN--LTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQA--------NYCASKAGMIGFSKSLAQEIATRN  174 (245)
T ss_pred             HHHHhhc--cHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCc--------chHHHHHHHHHHHHHHHHHhhHhC
Confidence            3344455  8887777777642    3556899999965 44432211        1112332221111       1237


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +.++.++|+.+..+.....  .........+. .       ....+...+|+++++..++..... ..|+++++.+|.
T Consensus       175 i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~-~-------~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        175 VTVNCVAPGFIESAMTGKL--NDKQKEAIMGA-I-------PMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             eEEEEEEECcCcCchhccc--ChHHHHHHhcC-C-------CCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            9999999997755432211  01111111111 0       112256799999999988865433 346899988764

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0045  Score=49.74  Aligned_cols=123  Identities=18%  Similarity=0.135  Sum_probs=69.3

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CC--------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SG--------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~--------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e   74 (255)
                      .++.+++.|  +.++.++++++..    ..        ..++|++||...+....            ....|+..|...+
T Consensus       109 ~~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~  174 (258)
T PRK06949        109 DFDFVFDTN--TRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP------------QIGLYCMSKAAVV  174 (258)
T ss_pred             HHHHHHhhc--chhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC------------CccHHHHHHHHHH
Confidence            344455555  8888888877652    11        25899999976553211            1134555553221


Q ss_pred             ------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 ------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 ------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                                  .++.+++++||.|+++.....+.......+ ...   ++     ...+...+|+++++..++..... 
T Consensus       175 ~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~---~~-----~~~~~~p~~~~~~~~~l~~~~~~~  245 (258)
T PRK06949        175 HMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKL-VSM---LP-----RKRVGKPEDLDGLLLLLAADESQF  245 (258)
T ss_pred             HHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHH-Hhc---CC-----CCCCcCHHHHHHHHHHHhChhhcC
Confidence                        279999999999998754321111111111 111   11     01245579999999999885433 


Q ss_pred             CCCCEEEecCC
Q 025270          142 ASSNIFNLVSD  152 (255)
Q Consensus       142 ~~~~~~~i~~~  152 (255)
                      ..|..+.+.++
T Consensus       246 ~~G~~i~~dgg  256 (258)
T PRK06949        246 INGAIISADDG  256 (258)
T ss_pred             CCCcEEEeCCC
Confidence            34566555443

>PRK12743 oxidoreductase; Provisional

Probab=97.03  E-value=0.0037  Score=50.34  Aligned_cols=121  Identities=12%  Similarity=0.085  Sum_probs=69.3

Q ss_pred             ceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      +..++.|  +.+..++++++...    + -.++|++||.......            +....|...|...          
T Consensus       105 ~~~~~~n--~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~~  170 (256)
T PRK12743        105 RKIFTVD--VDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL------------PGASAYTAAKHALGGLTKAMALE  170 (256)
T ss_pred             HHHHHHh--hHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC------------CCcchhHHHHHHHHHHHHHHHHH
Confidence            3444455  88888888877643    1 2489999996422111            0113455444332          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        ..++.++.++||.+.++..... ..........+.  ++     .  .+.+.+|++.++..++..... ..|.++.+.
T Consensus       171 ~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~~~~~~~~~--~~-----~--~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  240 (256)
T PRK12743        171 LVEHGILVNAVAPGAIATPMNGMD-DSDVKPDSRPGI--PL-----G--RPGDTHEIASLVAWLCSEGASYTTGQSLIVD  240 (256)
T ss_pred             hhhhCeEEEEEEeCCccCcccccc-ChHHHHHHHhcC--CC-----C--CCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence              1278999999999988743221 111111111111  11     1  134789999999988875443 346788877


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      ++.
T Consensus       241 gg~  243 (256)
T PRK12743        241 GGF  243 (256)
T ss_pred             CCc
Confidence            764

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.00073  Score=54.93  Aligned_cols=100  Identities=11%  Similarity=-0.052  Sum_probs=58.7

Q ss_pred             cccHHH----HHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h---hCCceEE
Q 025270           18 FRLQRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWAS   81 (255)
Q Consensus        18 ~~~~~~----ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e---~~~~~~i   81 (255)
                      +.++.+    ++..+++.+..++|++||...+....            ..+.|+..|...         +   .++.+++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~  176 (270)
T PRK05650        109 LMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP------------AMSSYNVAKAGVVALSETLLVELADDEIGVHV  176 (270)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            544444    45556666778999999976553211            124566666532         2   2789999


Q ss_pred             EecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           82 FRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        82 lRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                      ++||.+..+.....  ..+.... ....         .....+++++|+|+.++.++++.
T Consensus       177 v~Pg~v~t~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        177 VCPSFFQTNLLDSFRGPNPAMKA-QVGK---------LLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             EecCccccCcccccccCchhHHH-HHHH---------HhhcCCCCHHHHHHHHHHHHhCC
Confidence            99999977643221  0011100 0000         00123578999999999999864

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.0028  Score=51.01  Aligned_cols=119  Identities=10%  Similarity=0.064  Sum_probs=69.4

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++...    +..++|++||...+.....            ...|+..|.+.+         
T Consensus       119 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~la~e  184 (256)
T PRK12748        119 LDKHYAVN--VRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD------------ELAYAATKGAIEAFTKSLAPE  184 (256)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC------------chHHHHHHHHHHHHHHHHHHH
Confidence            34445555  88999999888642    3458999999766543211            134554443322         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.++.++||.+..+....    .........    .+.     ..+...+|+++++..++..... ..|+++++.
T Consensus       185 ~~~~~i~v~~i~Pg~~~t~~~~~----~~~~~~~~~----~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  251 (256)
T PRK12748        185 LAEKGITVNAVNPGPTDTGWITE----ELKHHLVPK----FPQ-----GRVGEPVDAARLIAFLVSEEAKWITGQVIHSE  251 (256)
T ss_pred             HHHhCeEEEEEEeCcccCCCCCh----hHHHhhhcc----CCC-----CCCcCHHHHHHHHHHHhCcccccccCCEEEec
Confidence               27899999999776543221    111111111    110     1134568999999988875432 346888887


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      ++.
T Consensus       252 ~g~  254 (256)
T PRK12748        252 GGF  254 (256)
T ss_pred             CCc
Confidence            653

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0019  Score=52.47  Aligned_cols=93  Identities=10%  Similarity=-0.019  Sum_probs=56.6

Q ss_pred             cccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------------HhhCCceEE
Q 025270           18 FRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e~~~~~~i   81 (255)
                      +.++.+++.+    +++.+..+||++||...+....            ....|..+|..            ...++++++
T Consensus       110 ~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~  177 (273)
T PRK07825        110 VYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVP------------GMATYCASKHAVVGFTDAARLELRGTGVHVSV  177 (273)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCC------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence            6555554444    4556677999999976543211            12345544432            223899999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      ++|+.+-.+...             +..      +.....++..+|+|+.++.++.++..
T Consensus       178 v~Pg~v~t~~~~-------------~~~------~~~~~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        178 VLPSFVNTELIA-------------GTG------GAKGFKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             EeCCcCcchhhc-------------ccc------cccCCCCCCHHHHHHHHHHHHhCCCC
Confidence            999877443211             110      11123468999999999999987653

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0029  Score=50.93  Aligned_cols=121  Identities=9%  Similarity=0.082  Sum_probs=71.2

Q ss_pred             eEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----Hh-----
Q 025270           10 ALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----SE-----   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~e-----   74 (255)
                      .+++.|  +.++.++++++..    .+ ..++|++||...++....            ...|+..|..     +.     
T Consensus       110 ~~~~~n--~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~~a~e~  175 (260)
T PRK06198        110 RHFAVN--VRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF------------LAAYCASKGALATLTRNAAYAL  175 (260)
T ss_pred             HHHHHh--hHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC------------cchhHHHHHHHHHHHHHHHHHh
Confidence            344455  7788888777753    22 357999999877653211            1335544433     21     


Q ss_pred             --hCCceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 --NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                        .++.++.++|+.++++.....      ....++......         .....+++.+|+++++..++..... ..|+
T Consensus       176 ~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~  246 (260)
T PRK06198        176 LRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAAT---------QPFGRLLDPDEVARAVAFLLSDESGLMTGS  246 (260)
T ss_pred             cccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhcc---------CCccCCcCHHHHHHHHHHHcChhhCCccCc
Confidence              268899999999988753210      001111111111         1122367999999999999875543 3468


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      ++++.++.
T Consensus       247 ~~~~~~~~  254 (260)
T PRK06198        247 VIDFDQSV  254 (260)
T ss_pred             eEeECCcc
Confidence            88877654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.93  E-value=0.0057  Score=49.12  Aligned_cols=127  Identities=9%  Similarity=0.053  Sum_probs=69.5

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHh-------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE-------N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~   75 (255)
                      ++..++.|  +.++..+++++..    .+..+||++||.... +....        ..+..+|.+.+.+++.       .
T Consensus       110 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------~~Y~~sK~a~~~~~~~la~e~~~~  179 (254)
T PRK08085        110 WNDVIAVN--QTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTI--------TPYAASKGAVKMLTRGMCVELARH  179 (254)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCC--------cchHHHHHHHHHHHHHHHHHHHhh
Confidence            33444555  7777777776653    345689999996432 21110        0111233333322222       2


Q ss_pred             CCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           76 FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ++.+..++||.+..+...... ...+...+....+         ...+...+|++.++..++..... .+|++..+.+|.
T Consensus       180 gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        180 NIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP---------AARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            899999999999876432210 0111112221111         12366889999999998886543 346777666654

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0022  Score=54.00  Aligned_cols=105  Identities=10%  Similarity=-0.011  Sum_probs=63.0

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h-----hCCceEEEe
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E-----NFSNWASFR   83 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e-----~~~~~~ilR   83 (255)
                      +.++..++..+++.+..+||++||...+....            ....|..+|...         |     .++.+++++
T Consensus       121 ~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~  188 (334)
T PRK07109        121 VHGTLAALRHMRPRDRGAIIQVGSALAYRSIP------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQ  188 (334)
T ss_pred             HHHHHHHHHHHHhcCCcEEEEeCChhhccCCC------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEe
Confidence            44556667777666667899999987764321            124566666531         2     258899999


Q ss_pred             cCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           84 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        84 p~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      |+.+-.+....      ........       ......+...+|+|++++.+++++.    ..+.+++
T Consensus       189 Pg~v~T~~~~~------~~~~~~~~-------~~~~~~~~~pe~vA~~i~~~~~~~~----~~~~vg~  239 (334)
T PRK07109        189 PPAVNTPQFDW------ARSRLPVE-------PQPVPPIYQPEVVADAILYAAEHPR----RELWVGG  239 (334)
T ss_pred             CCCccCchhhh------hhhhcccc-------ccCCCCCCCHHHHHHHHHHHHhCCC----cEEEeCc
Confidence            99886542110      11111110       0111235689999999999998763    3455554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.90  E-value=0.0029  Score=50.31  Aligned_cols=98  Identities=10%  Similarity=-0.003  Sum_probs=59.7

Q ss_pred             EecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------------Hhh
Q 025270           12 FRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SEN   75 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e~   75 (255)
                      ++.|  +.++.++++++.    +.+.+++|++||...+.....            ...|+..|.+            ...
T Consensus       112 ~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~~a~e~~~~  177 (239)
T PRK07666        112 IQVN--LMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV------------TSAYSASKFGVLGLTESLMQEVRKH  177 (239)
T ss_pred             HHHH--hHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC------------CcchHHHHHHHHHHHHHHHHHhhcc
Confidence            4444  777777777765    345678999999764432111            1234444332            223


Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      +++++++|||.+..+.....           +.  . .   .....++..+|+|+++..+++.+.
T Consensus       178 gi~v~~v~pg~v~t~~~~~~-----------~~--~-~---~~~~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        178 NIRVTALTPSTVATDMAVDL-----------GL--T-D---GNPDKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             CcEEEEEecCcccCcchhhc-----------cc--c-c---cCCCCCCCHHHHHHHHHHHHhCCC
Confidence            89999999999877532210           00  0 0   011235788999999999998763

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.90  E-value=0.0042  Score=49.48  Aligned_cols=113  Identities=7%  Similarity=-0.034  Sum_probs=66.1

Q ss_pred             cccHHHHHHHHh----hCCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHH------------HhhCCceE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e~~~~~~   80 (255)
                      +.++.++++++.    +.+.++||++||...+ +...             ...|...|..            .+.++.++
T Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~-------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~  181 (247)
T PRK05565        115 LTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC-------------EVLYSASKGAVNAFTKALAKELAPSGIRVN  181 (247)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC-------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence            677666766665    3456789999996644 3221             1234444322            12389999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .+|||.+-.+..... .......+...         .....+...+|++++++.++..... ..|+.+++.++.
T Consensus       182 ~v~pg~v~t~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        182 AVAPGAIDTEMWSSF-SEEDKEGLAEE---------IPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             EEEECCccCcccccc-ChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCc
Confidence            999998866533221 11111111110         1112356889999999999876543 356788777653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.87  E-value=0.0073  Score=47.95  Aligned_cols=114  Identities=13%  Similarity=0.108  Sum_probs=65.7

Q ss_pred             cccHHH----HHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------H---hhCCceEE
Q 025270           18 FRLQRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------S---ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~----ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~---e~~~~~~i   81 (255)
                      +.++..    ++..+++.+.+++|++||........            ....|...|..         .   ..++.+..
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~  177 (242)
T TIGR01829       110 LNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQF------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNT  177 (242)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            566555    45555666778999999964322111            11345544431         1   23899999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ++|+.+.++.... .....+..+..+.+.         ..+...+|+++++..++..+.. ..|+.+.+.++.
T Consensus       178 i~pg~~~t~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       178 ISPGYIATDMVMA-MREDVLNSIVAQIPV---------GRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             EeeCCCcCccccc-cchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            9999998765432 122233333322211         1134568999999887765432 346888887764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.0013  Score=53.33  Aligned_cols=121  Identities=15%  Similarity=0.035  Sum_probs=65.5

Q ss_pred             ceEEecccCcccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------------
Q 025270            9 KALFRTNNNFRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------   72 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------   72 (255)
                      +.+++.|  +.++.+++++    +++.+.++||++||...+....            ....|+.+|..            
T Consensus        98 ~~~~~~n--~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~el  163 (270)
T PRK06179         98 QALFDTN--VFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAP------------YMALYAASKHAVEGYSESLDHEV  163 (270)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCC------------CccHHHHHHHHHHHHHHHHHHHH
Confidence            3444555  6677777766    4566788999999976543211            11345544432            


Q ss_pred             HhhCCceEEEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEE
Q 025270           73 SENFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  147 (255)
Q Consensus        73 ~e~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  147 (255)
                      .+.++++++++||.+.++.....     ....+ ....... .....  .........+|+|+.++.++..+..  +..|
T Consensus       164 ~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~--~~~~~~~~~~~va~~~~~~~~~~~~--~~~~  237 (270)
T PRK06179        164 RQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY-DRERAVV-SKAVA--KAVKKADAPEVVADTVVKAALGPWP--KMRY  237 (270)
T ss_pred             hhhCcEEEEEeCCCcccccccccCCCCCcchhh-HHHHHHH-HHHHH--hccccCCCHHHHHHHHHHHHcCCCC--CeeE
Confidence            22489999999999887643221     00000 0000000 00000  0011235678999999999987653  2445


Q ss_pred             Ee
Q 025270          148 NL  149 (255)
Q Consensus       148 ~i  149 (255)
                      ..
T Consensus       238 ~~  239 (270)
T PRK06179        238 TA  239 (270)
T ss_pred             ec
Confidence            43

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.85  E-value=0.0068  Score=48.44  Aligned_cols=120  Identities=11%  Similarity=0.074  Sum_probs=64.0

Q ss_pred             CcccHHHHHHHHhh-CCc------ceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---hCCceEE
Q 025270           17 NFRLQRPVADWAKS-SGV------KQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~-~~v------~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~~~~~~i   81 (255)
                      |+.++..++.++.. ...      .+||++||.. .++.....       ..+..+|.+.+.++.    +   .++.+++
T Consensus       112 n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~-------~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~  184 (248)
T PRK06947        112 NVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEY-------VDYAGSKGAVDTLTLGLAKELGPHGVRVNA  184 (248)
T ss_pred             ccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCC-------cccHhhHHHHHHHHHHHHHHhhhhCcEEEE
Confidence            37787777654432 221      3599999865 44432110       112234444332222    2   2799999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      +|||.+..+.......+.........  .++     .  -....+|+++.++.++.+... ..|+++.+.++
T Consensus       185 i~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~-----~--~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        185 VRPGLIETEIHASGGQPGRAARLGAQ--TPL-----G--RAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             EeccCcccccccccCCHHHHHHHhhc--CCC-----C--CCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            99999987643211111111111111  111     1  135789999999999887643 34677766554

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.83  E-value=0.006  Score=48.72  Aligned_cols=135  Identities=9%  Similarity=-0.073  Sum_probs=76.3

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCC---------------CCCCCCCChhHHHH
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG---------------DVVKPDAGHVQVEK   70 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~---------------~~~~~~~~~y~~ek   70 (255)
                      ++..++.|  +.++..+++++...  +-.+||++||...++.....+..+.               ..+.+....|+.+|
T Consensus        64 ~~~~~~vN--~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         64 VELVARVN--FLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHHhhhhc--hHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            44555666  99999999988753  2258999999888763221111111               01122335677777


Q ss_pred             HHH----------h---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           71 YIS----------E---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        71 ~~~----------e---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                      ...          +   .++.+..++||.+.++..... ....-.......  ..   +  ...+...+|+|+++..++.
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~--~~---~--~~~~~~pe~va~~~~~l~s  213 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF-RSMLGQERVDSD--AK---R--MGRPATADEQAAVLVFLCS  213 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc-hhhhhhHhhhhc--cc---c--cCCCCCHHHHHHHHHHHcC
Confidence            532          1   278999999999988743221 000000000000  00   1  1124678999999999886


Q ss_pred             CCCc-CCCCEEEecCC
Q 025270          138 NPEA-ASSNIFNLVSD  152 (255)
Q Consensus       138 ~~~~-~~~~~~~i~~~  152 (255)
                      .... ..|+.+.+.++
T Consensus       214 ~~~~~~~G~~i~vdgg  229 (241)
T PRK12428        214 DAARWINGVNLPVDGG  229 (241)
T ss_pred             hhhcCccCcEEEecCc
Confidence            4432 34566666555

>PRK06196 oxidoreductase; Provisional

Probab=96.77  E-value=0.022  Score=47.49  Aligned_cols=131  Identities=13%  Similarity=-0.023  Sum_probs=66.4

Q ss_pred             ceEEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            9 KALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         9 d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +..+++|  +.+    +..++.++++.+..++|++||.+..... .........+.. ....|+.+|.+.+         
T Consensus       122 ~~~~~vN--~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la~~  198 (315)
T PRK06196        122 EAQFATN--HLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYD-KWLAYGQSKTANALFAVHLDKL  198 (315)
T ss_pred             HHHHHHh--hHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCC-hHHHHHHHHHHHHHHHHHHHHH
Confidence            3334445  666    4555556666655689999996543211 100001011111 2245777776432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHH-HHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                         .++.++++|||.+.++............ ........++.      ..+...+|.|..++.++..+.. ..++.|.
T Consensus       199 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~  271 (315)
T PRK06196        199 GKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID------PGFKTPAQGAATQVWAATSPQLAGMGGLYC  271 (315)
T ss_pred             hcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh------hhcCCHhHHHHHHHHHhcCCccCCCCCeEe
Confidence               3799999999999887543211000000 00000000000      0245789999999998875543 2234443

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0041  Score=50.42  Aligned_cols=131  Identities=8%  Similarity=0.134  Sum_probs=71.2

Q ss_pred             ccccceEEecc--cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            5 YAKFKALFRTN--NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         5 ~~~~d~~~~~~--~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .+.++..++.|  ..+..++.++..+++.+..++|++||...+....            ....|.+.|...         
T Consensus       106 ~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~------------~~~~y~asKaal~~l~~~la~  173 (263)
T PRK08339        106 MEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP------------NIALSNVVRISMAGLVRTLAK  173 (263)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC------------cchhhHHHHHHHHHHHHHHHH
Confidence            34455555555  1233355556666666667899999976542211            112344444321         


Q ss_pred             ---hhCCceEEEecCcccCCCCCCC----------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           74 ---ENFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                         ..|+.+..+.||.+-.+.....          ........+...  .+       ..-+...+|+|.++..++....
T Consensus       174 el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~dva~~v~fL~s~~~  244 (263)
T PRK08339        174 ELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP--IP-------LGRLGEPEEIGYLVAFLASDLG  244 (263)
T ss_pred             HhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc--CC-------cccCcCHHHHHHHHHHHhcchh
Confidence               2378999999998855421100          000111111111  11       1125678999999999987543


Q ss_pred             c-CCCCEEEecCCCccC
Q 025270          141 A-ASSNIFNLVSDRAVT  156 (255)
Q Consensus       141 ~-~~~~~~~i~~~~~~s  156 (255)
                      . ..|+++.+.+|...|
T Consensus       245 ~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        245 SYINGAMIPVDGGRLNS  261 (263)
T ss_pred             cCccCceEEECCCcccc
Confidence            3 456888887776544

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.0054  Score=48.83  Aligned_cols=96  Identities=7%  Similarity=-0.056  Sum_probs=58.8

Q ss_pred             cccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEE
Q 025270           18 FRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~i   81 (255)
                      +.++.++++++    ++.+..++|++||...+.....            ...|+..|...            ..++++++
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~  182 (241)
T PRK07454        115 LTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ------------WGAYCVSKAALAAFTKCLAEEERSHGIRVCT  182 (241)
T ss_pred             cHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC------------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence            66666655554    4455678999999877653211            13455555432            23899999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      +|||.+-.+.....            ......    .....+..+|+|+++..++..+..
T Consensus       183 i~pg~i~t~~~~~~------------~~~~~~----~~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        183 ITLGAVNTPLWDTE------------TVQADF----DRSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             EecCcccCCccccc------------cccccc----ccccCCCHHHHHHHHHHHHcCCcc
Confidence            99998866532110            000000    011257899999999999987754

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.0068  Score=48.83  Aligned_cols=97  Identities=12%  Similarity=0.107  Sum_probs=59.7

Q ss_pred             ceEEecccCcccHHHHHH----HHhhCCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            9 KALFRTNNNFRLQRPVAD----WAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~----aa~~~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      +..++.|  +.++.++++    ++++.+..+||++||...+ +.+.             ...|+.+|...          
T Consensus       104 ~~~~~~n--~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~-------------~~~Y~asK~a~~~~~~~l~~e  168 (257)
T PRK07024        104 REVMDTN--YFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG-------------AGAYSASKAAAIKYLESLRVE  168 (257)
T ss_pred             HHHHhHh--cHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC-------------CcchHHHHHHHHHHHHHHHHH
Confidence            3444555  777777665    5555666789999986543 3211             13455444322          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                        ..+++++++|||.+.++....             ....       ....+..+|+++.++.++.+..
T Consensus       169 ~~~~gi~v~~v~Pg~v~t~~~~~-------------~~~~-------~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        169 LRPAGVRVVTIAPGYIRTPMTAH-------------NPYP-------MPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             hhccCcEEEEEecCCCcCchhhc-------------CCCC-------CCCccCHHHHHHHHHHHHhCCC
Confidence              238999999999998763211             0000       0013579999999999998653

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.0029  Score=50.86  Aligned_cols=109  Identities=11%  Similarity=-0.054  Sum_probs=52.9

Q ss_pred             HHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEEecCcccCCCCCC
Q 025270           22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYMIGSGNNK   94 (255)
Q Consensus        22 ~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~ilRp~~v~G~~~~~   94 (255)
                      ..++..+++.+.++||++||...+.....       ...+..+|.+.+.++.       ..+++++++|||.+.-+....
T Consensus       113 ~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~  185 (257)
T PRK09291        113 QGFVRKMVARGKGKVVFTSSMAGLITGPF-------TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT  185 (257)
T ss_pred             HHHHHHHHhcCCceEEEEcChhhccCCCC-------cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh
Confidence            34455556667789999999653322110       0011223444433321       248999999998764321110


Q ss_pred             CcHHHHHHHHHc-CCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           95 DCEEWFFDRIVR-KRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        95 ~~~~~~~~~~~~-~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                       ....+ ..... ... +.. ..+....+.+..+|+++.++.++..+.
T Consensus       186 -~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (257)
T PRK09291        186 -MAETP-KRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPADT  230 (257)
T ss_pred             -hhhhh-hhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCCC
Confidence             00000 00000 000 111 111223345788888888888876543

>PRK08264 short chain dehydrogenase; Validated

Probab=96.66  E-value=0.0081  Score=47.65  Aligned_cols=61  Identities=10%  Similarity=-0.041  Sum_probs=40.7

Q ss_pred             cccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceEE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~i   81 (255)
                      +.++.++++++.    +.+..+||++||...+....            ....|+..|...+            .++++++
T Consensus       106 ~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~  173 (238)
T PRK08264        106 YFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLG  173 (238)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            788888888765    34567899999977654211            1134554443322            2789999


Q ss_pred             EecCcccCC
Q 025270           82 FRPQYMIGS   90 (255)
Q Consensus        82 lRp~~v~G~   90 (255)
                      +||+.+.++
T Consensus       174 v~pg~v~t~  182 (238)
T PRK08264        174 VHPGPIDTD  182 (238)
T ss_pred             EeCCccccc
Confidence            999988665

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.66  E-value=0.012  Score=46.62  Aligned_cols=125  Identities=10%  Similarity=0.123  Sum_probs=68.6

Q ss_pred             ccceEEecccCcccHHHHHHHHh-----hCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHH----Hh--
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK-----SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYI----SE--   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~-----~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~----~e--   74 (255)
                      .++.+++.|  +.++.++++++.     +.+..++|++||.. .++....        ..+..+|++.+.+.    .+  
T Consensus        99 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--------~~Y~~sK~a~~~~~~~la~e~~  168 (239)
T TIGR01831        99 DWDIVIHTN--LDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ--------VNYSAAKAGLIGATKALAVELA  168 (239)
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC--------cchHHHHHHHHHHHHHHHHHHh
Confidence            344455555  888888888762     23446899999965 4443211        01122333322221    12  


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                       .++.++.++||.+-++.... . ...........  ++       ..+...+|+++++..++..... ..|.+..+.++
T Consensus       169 ~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~--~~-------~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       169 KRKITVNCIAPGLIDTEMLAE-V-EHDLDEALKTV--PM-------NRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HhCeEEEEEEEccCccccchh-h-hHHHHHHHhcC--CC-------CCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence             37999999999987664322 1 11111222111  11       1245679999999999986543 33455555543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.65  E-value=0.02  Score=46.59  Aligned_cols=122  Identities=10%  Similarity=0.051  Sum_probs=68.4

Q ss_pred             ceEEecccCcccHHHHH----HHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            9 KALFRTNNNFRLQRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll----~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      +.+++.|  +.++..++    ..+++.+..++|++||...+.....            ...|+.+|...+          
T Consensus       127 ~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------~~~Y~~sK~a~~~l~~~la~e~  192 (278)
T PRK08277        127 EFVFDLN--LLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTK------------VPAYSAAKAAISNFTQWLAVHF  192 (278)
T ss_pred             HHHHhhh--hHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCC------------CchhHHHHHHHHHHHHHHHHHh
Confidence            3344445  66665444    4444445568999999876643211            133554443321          


Q ss_pred             --hCCceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC-CCc-CCC
Q 025270           75 --NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PEA-ASS  144 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~-~~~-~~~  144 (255)
                        .++.+..++||.|..+.....      ........+....         ...-+...+|+|++++.++.. ... ..|
T Consensus       193 ~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~~l~s~~~~~~~tG  263 (278)
T PRK08277        193 AKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT---------PMGRFGKPEELLGTLLWLADEKASSFVTG  263 (278)
T ss_pred             CccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC---------CccCCCCHHHHHHHHHHHcCccccCCcCC
Confidence              278999999999987742210      0001111111111         112256789999999998876 332 356


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +.+.+.+|.
T Consensus       264 ~~i~vdgG~  272 (278)
T PRK08277        264 VVLPVDGGF  272 (278)
T ss_pred             CEEEECCCe
Confidence            777776663

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.013  Score=47.02  Aligned_cols=123  Identities=11%  Similarity=0.009  Sum_probs=70.3

Q ss_pred             eEEecccCcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h
Q 025270           10 ALFRTNNNFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N   75 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~   75 (255)
                      ..++.|  +.++.++++++..     .+..++|++||...+....            ....|+.+|...+         .
T Consensus       101 ~~~~~n--~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~e~  166 (252)
T PRK07856        101 KIVELN--LLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP------------GTAAYGAAKAGLLNLTRSLAVEW  166 (252)
T ss_pred             HHHHHh--hHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC------------CCchhHHHHHHHHHHHHHHHHHh
Confidence            344445  8888888888764     2345899999976543211            1234555554322         1


Q ss_pred             --CCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           76 --FSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        76 --~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                        .+.+..++||.+..+...... .......+....  +       ...+...+|+|++++.++..... .+|..+.+.+
T Consensus       167 ~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        167 APKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATV--P-------LGRLATPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             cCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcC--C-------CCCCcCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence              367888999988765322100 001111111111  1       11245789999999999875433 4578888887


Q ss_pred             CCcc
Q 025270          152 DRAV  155 (255)
Q Consensus       152 ~~~~  155 (255)
                      |...
T Consensus       238 g~~~  241 (252)
T PRK07856        238 GGER  241 (252)
T ss_pred             Ccch
Confidence            7543

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.0096  Score=47.86  Aligned_cols=116  Identities=10%  Similarity=0.042  Sum_probs=63.8

Q ss_pred             cccHHHHHHHHh----hCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHH-----HHH-------hhCCceE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEK-----YIS-------ENFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek-----~~~-------e~~~~~~   80 (255)
                      +.++.++++++.    +.+..++|++||.. +++....            ...|+..|     ++.       ..++.++
T Consensus       113 ~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~------------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~  180 (255)
T PRK06057        113 LTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS------------QISYTASKGGVLAMSRELGVQFARQGIRVN  180 (255)
T ss_pred             cHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC------------CcchHHHHHHHHHHHHHHHHHHHhhCcEEE
Confidence            666666555543    34455899998854 5553211            12344444     222       1279999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++|||.+.++........ -.....+. ...++ .    ..+..++|+++++..++..... ..|+.+.+.++
T Consensus       181 ~i~pg~v~t~~~~~~~~~-~~~~~~~~-~~~~~-~----~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        181 ALCPGPVNTPLLQELFAK-DPERAARR-LVHVP-M----GRFAEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             EEeeCCcCCchhhhhccC-CHHHHHHH-HhcCC-C----CCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999987753321000 00000000 00111 1    1478899999999988875443 34577777655

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.021  Score=45.80  Aligned_cols=130  Identities=8%  Similarity=0.109  Sum_probs=70.9

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h--
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E--   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e--   74 (255)
                      +.++.+++.|  +.++.++++++..    .+ -.++|++||...+.....       ...+..+|.+.+-+.+    +  
T Consensus       100 ~~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------~~~Y~~sKaa~~~~~~~la~e~~  170 (252)
T PRK07677        100 NGWNSVIDIV--LNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG-------VIHSAAAKAGVLAMTRTLAVEWG  170 (252)
T ss_pred             HHHHHHHhHh--hHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC-------CcchHHHHHHHHHHHHHHHHHhC
Confidence            3345566666  8888888888843    22 357999998754321111       0111123333222211    2  


Q ss_pred             --hCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 --NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        +|+.+..++||.+........  ......+.+.+..+         ...+...+|+++++..++..... .+|+++.+
T Consensus       171 ~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~  241 (252)
T PRK07677        171 RKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP---------LGRLGTPEEIAGLAYFLLSDEAAYINGTCITM  241 (252)
T ss_pred             cccCeEEEEEeecccccccccccccCCHHHHHHHhccCC---------CCCCCCHHHHHHHHHHHcCccccccCCCEEEE
Confidence              378999999999875321111  01122223322211         11256789999999888875432 45677777


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       242 ~gg~  245 (252)
T PRK07677        242 DGGQ  245 (252)
T ss_pred             CCCe
Confidence            7654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.55  E-value=0.017  Score=46.43  Aligned_cols=123  Identities=12%  Similarity=0.115  Sum_probs=69.3

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.+..++.+++.    +.+..++|++||...+.....            ...|+..|...+         
T Consensus       115 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~~~Y~asK~a~~~~~~~la~e  180 (258)
T PRK06935        115 WNAVMDIN--LNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF------------VPAYTASKHGVAGLTKAFANE  180 (258)
T ss_pred             HHHHHHHh--CHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC------------chhhHHHHHHHHHHHHHHHHH
Confidence            33444455  777666665544    445678999999876533211            123454443321         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+..++||.+..+...... .......+...    ++     ...+...+|++.++..++..... ..|.++.+
T Consensus       181 ~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  251 (258)
T PRK06935        181 LAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKR----IP-----AGRWGEPDDLMGAAVFLASRASDYVNGHILAV  251 (258)
T ss_pred             hhhhCeEEEEEEeccccccchhhcccChHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEE
Confidence               2799999999988765322110 00111111111    11     12256779999999998875443 34678877


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       252 dgg~  255 (258)
T PRK06935        252 DGGW  255 (258)
T ss_pred             CCCe
Confidence            7663

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.01  Score=47.65  Aligned_cols=124  Identities=8%  Similarity=-0.056  Sum_probs=67.5

Q ss_pred             cceEEecccCcccHHH----HHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~----ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..+++|  +.+...    ++..+++.+..++|++||...+....           +....|+.+|.+.+         
T Consensus       108 ~~~~~~~N--~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e  174 (254)
T PRK07478        108 WRETLATN--LTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF-----------PGMAAYAASKAGLIGLTQVLAAE  174 (254)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC-----------CCcchhHHHHHHHHHHHHHHHHH
Confidence            34445555  654444    45555555566899999976543111           01134555553322         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+..++||.+-.+..... ..... ........        ....+...+|+|++++.++..... ..|+++.+
T Consensus       175 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~  245 (254)
T PRK07478        175 YGAQGIRVNALLPGGTDTPMGRAMGDTPEA-LAFVAGLH--------ALKRMAQPEEIAQAALFLASDAASFVTGTALLV  245 (254)
T ss_pred             HhhcCEEEEEEeeCcccCcccccccCCHHH-HHHHHhcC--------CCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEe
Confidence               268999999998865522110 00111 11111110        012256789999999998875543 34677777


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       246 dgg~  249 (254)
T PRK07478        246 DGGV  249 (254)
T ss_pred             CCch
Confidence            6654

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.021  Score=46.10  Aligned_cols=115  Identities=10%  Similarity=0.036  Sum_probs=65.7

Q ss_pred             CcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----------CCceE
Q 025270           17 NFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----------~~~~~   80 (255)
                      |+.++.++++++..     .+..++|++||.......            +....|++.|...+.           .+.+.
T Consensus       118 n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~  185 (263)
T PRK07814        118 NVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVN  185 (263)
T ss_pred             hcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEE
Confidence            38899999999874     345689999995422111            112456666644321           46788


Q ss_pred             EEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           81 SFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++||.+..+...... -..+ .....+..        ........+|+|++++.++..... ..|+.+.+.++
T Consensus       186 ~i~Pg~v~t~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        186 AIAPGSILTSALEVVAANDEL-RAPMEKAT--------PLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             EEEeCCCcCchhhhccCCHHH-HHHHHhcC--------CCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            8999888654221100 0111 11111110        111245789999999999975433 34577777654

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.0042  Score=50.73  Aligned_cols=66  Identities=20%  Similarity=0.130  Sum_probs=43.6

Q ss_pred             EEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------
Q 025270           11 LFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------   74 (255)
Q Consensus        11 ~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------   74 (255)
                      .+++|  +.+    +.+++..+++.+..+||++||...+...            +....|+.+|...+            
T Consensus       103 ~~~~N--~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l~~el~~  168 (277)
T PRK05993        103 QFEAN--FFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPM------------KYRGAYNASKFAIEGLSLTLRMELQG  168 (277)
T ss_pred             HHhHH--hHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCC------------CccchHHHHHHHHHHHHHHHHHHhhh
Confidence            34444  555    6778888888777899999996544211            11245665554332            


Q ss_pred             hCCceEEEecCcccCC
Q 025270           75 NFSNWASFRPQYMIGS   90 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~   90 (255)
                      .++.+++++||.+-.+
T Consensus       169 ~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        169 SGIHVSLIEPGPIETR  184 (277)
T ss_pred             hCCEEEEEecCCccCc
Confidence            3899999999988554

>PRK06398 aldose dehydrogenase; Validated

Probab=96.39  E-value=0.03  Score=45.17  Aligned_cols=132  Identities=6%  Similarity=0.027  Sum_probs=69.1

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----h--CC
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----N--FS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----~--~~   77 (255)
                      ++.+++.|  +.++.++++++.    +.+..++|++||...+.....       ...+..+|.+.+.+.+.    .  .+
T Consensus        96 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~~~Y~~sKaal~~~~~~la~e~~~~i  166 (258)
T PRK06398         96 WDRIINVN--VNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN-------AAAYVTSKHAVLGLTRSIAVDYAPTI  166 (258)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC-------CchhhhhHHHHHHHHHHHHHHhCCCC
Confidence            44445556  888877777765    345578999999766542111       01122244443333222    2  37


Q ss_pred             ceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           78 NWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                      .+..++||.+-.+.....      ..+.........     ++.......+...+|+|+++..++..... ..|+++.+.
T Consensus       167 ~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~d  241 (258)
T PRK06398        167 RCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE-----WGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVD  241 (258)
T ss_pred             EEEEEecCCccchHHhhhhhccccCChhhhHHHHHh-----hhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEC
Confidence            888999998754421100      000000000000     00001112356789999999998875433 346777776


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +|.
T Consensus       242 gg~  244 (258)
T PRK06398        242 GGL  244 (258)
T ss_pred             Ccc
Confidence            664

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.016  Score=46.23  Aligned_cols=102  Identities=10%  Similarity=0.069  Sum_probs=61.6

Q ss_pred             ceEEecccCcccHHHHHHHHhhC--CcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCc
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSN   78 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~   78 (255)
                      +..++.|  +.++.++++++...  +-+++|++||.. .++....        ..+..+|.+.+.+.+       ..++.
T Consensus        96 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~--------~~Y~asK~a~~~~~~~l~~e~~~~gi~  165 (240)
T PRK06101         96 ARVFNVN--VLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRA--------EAYGASKAAVAYFARTLQLDLRPKGIE  165 (240)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCC--------chhhHHHHHHHHHHHHHHHHHHhcCce
Confidence            3345555  89999999998853  234789888854 3322110        011223333333221       23899


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      ++++|||.++++.....             ....       ...+..+|+|+.++..++.+.
T Consensus       166 v~~v~pg~i~t~~~~~~-------------~~~~-------~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        166 VVTVFPGFVATPLTDKN-------------TFAM-------PMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             EEEEeCCcCCCCCcCCC-------------CCCC-------CcccCHHHHHHHHHHHHhcCC
Confidence            99999999988643321             0000       014689999999999998764

>PRK12742 oxidoreductase; Provisional

Probab=96.37  E-value=0.034  Score=44.00  Aligned_cols=126  Identities=10%  Similarity=0.075  Sum_probs=67.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCc
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSN   78 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~   78 (255)
                      ++..++.|  +.++.+++..+...  +..++|++||......    +...  ...+..+|.+.+.++..       .++.
T Consensus        99 ~~~~~~~n--~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~~--~~~Y~~sKaa~~~~~~~la~~~~~~gi~  170 (237)
T PRK12742         99 IDRLFKIN--IHAPYHASVEAARQMPEGGRIIIIGSVNGDRM----PVAG--MAAYAASKSALQGMARGLARDFGPRGIT  170 (237)
T ss_pred             HHHHHhHH--HHHHHHHHHHHHHHHhcCCeEEEEeccccccC----CCCC--CcchHHhHHHHHHHHHHHHHHHhhhCeE
Confidence            44455555  77877776665543  2358999999643211    1100  01122244443333322       2799


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      +..++||.+..+...... + ....+....  ++       ..+...+|+++++..++..... ..|..+.+.++
T Consensus       171 v~~v~Pg~~~t~~~~~~~-~-~~~~~~~~~--~~-------~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        171 INVVQPGPIDTDANPANG-P-MKDMMHSFM--AI-------KRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             EEEEecCcccCCcccccc-H-HHHHHHhcC--CC-------CCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence            999999988765422110 1 111111111  11       1246789999999999876543 34677766654

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.03  Score=44.79  Aligned_cols=119  Identities=12%  Similarity=0.065  Sum_probs=66.4

Q ss_pred             EEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----h-------
Q 025270           11 LFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----E-------   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----e-------   74 (255)
                      .++.|  +.+...++.++    ++.+..++|++||...+....            ..+.|+.+|...     .       
T Consensus       113 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~al~~~~~~l~~e~~~  178 (252)
T PRK07035        113 TVDVN--IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD------------FQGIYSITKAAVISMTKAFAKECAP  178 (252)
T ss_pred             HHHHh--hHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC------------CCcchHHHHHHHHHHHHHHHHHHhh
Confidence            34444  77777666555    455567899999864332111            113454444332     2       


Q ss_pred             hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++.+..+.||.+-.+...... ............+         ...+...+|+|+++..++..... ..|+++++.++
T Consensus       179 ~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        179 FGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             cCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            2789999999988554321110 0111222221111         11245789999999998876543 34677777655

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.29  E-value=0.069  Score=40.36  Aligned_cols=117  Identities=13%  Similarity=0.177  Sum_probs=71.8

Q ss_pred             HHHHHHHHhhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhH--------HHHHHHhhCCceEEEecCcccCCC
Q 025270           21 QRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQ--------VEKYISENFSNWASFRPQYMIGSG   91 (255)
Q Consensus        21 ~~~ll~aa~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~--------~ek~~~e~~~~~~ilRp~~v~G~~   91 (255)
                      ...++++.+.++++|++.++..+ .|-....  .-.+.|.-|. ..+.        .+.+..+..++||.+-|+..|-|+
T Consensus        85 ~~~li~~l~~agv~RllVVGGAGSL~id~g~--rLvD~p~fP~-ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PG  161 (211)
T COG2910          85 IEALIEALKGAGVPRLLVVGGAGSLEIDEGT--RLVDTPDFPA-EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPG  161 (211)
T ss_pred             HHHHHHHHhhcCCeeEEEEcCccceEEcCCc--eeecCCCCch-hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCc
Confidence            45588888988999999998855 3322221  1111121111 1111        233344558999999999999987


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      ...+       +...|+...+.+.  .--++|...|.|-+++..++++...+ +.|.+.
T Consensus       162 erTg-------~yrlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E~~~h~r-qRftv~  210 (211)
T COG2910         162 ERTG-------NYRLGGDQLLVNA--KGESRISYADYAIAVLDELEKPQHIR-QRFTVA  210 (211)
T ss_pred             cccC-------ceEeccceEEEcC--CCceeeeHHHHHHHHHHHHhcccccc-eeeeec
Confidence            6654       1122333223221  12358999999999999999998764 666553

>PRK06484 short chain dehydrogenase; Validated

Probab=96.24  E-value=0.026  Score=50.50  Aligned_cols=124  Identities=10%  Similarity=0.062  Sum_probs=73.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      .++.+++.|  +.++.++++++...  +-.++|++||.+.+....            ....|++.|...+          
T Consensus       367 ~~~~~~~~n--~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaal~~l~~~la~e~  432 (520)
T PRK06484        367 DFTRVYDVN--LSGAFACARAAARLMSQGGVIVNLGSIASLLALP------------PRNAYCASKAAVTMLSRSLACEW  432 (520)
T ss_pred             HHHHHHHhC--cHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC------------CCchhHHHHHHHHHHHHHHHHHh
Confidence            345556666  89988888887753  235899999976543211            1234665554332          


Q ss_pred             --hCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        .++.+..++||.|..+......  -......+.+..+  +       ..+...+|+|++++.++..... ..|+++.+
T Consensus       433 ~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~dia~~~~~l~s~~~~~~~G~~i~v  503 (520)
T PRK06484        433 APAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP--L-------GRLGDPEEVAEAIAFLASPAASYVNGATLTV  503 (520)
T ss_pred             hhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCccccCccCcEEEE
Confidence              2799999999998775322100  0011111211111  1       1246789999999999875433 34678877


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       504 dgg~  507 (520)
T PRK06484        504 DGGW  507 (520)
T ss_pred             CCCc
Confidence            7663

>PRK08643 acetoin reductase; Validated

Probab=96.22  E-value=0.034  Score=44.61  Aligned_cols=121  Identities=7%  Similarity=-0.011  Sum_probs=65.6

Q ss_pred             eEEecccCcccHHHHHHHHhh----CC-cceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270           10 ALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      ..++.|  +.++..+++++..    .+ -.++|++||... ++...             ...|+..|...          
T Consensus       105 ~~~~~n--~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------~~~Y~~sK~a~~~~~~~la~e  169 (256)
T PRK08643        105 KVYNIN--VGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE-------------LAVYSSTKFAVRGLTQTAARD  169 (256)
T ss_pred             HHHHHh--hHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC-------------CchhHHHHHHHHHHHHHHHHH
Confidence            334444  7776666665543    22 247999998653 33211             13355444432          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCc---------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                        ..++.++.++||.+..+......         ...+........   +     ....+...+|+|.++..++..... 
T Consensus       170 ~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~va~~~~~L~~~~~~~  241 (256)
T PRK08643        170 LASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD---I-----TLGRLSEPEDVANCVSFLAGPDSDY  241 (256)
T ss_pred             hcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc---C-----CCCCCcCHHHHHHHHHHHhCccccC
Confidence              23789999999988775321100         000000000000   0     011256789999999999876543 


Q ss_pred             CCCCEEEecCCC
Q 025270          142 ASSNIFNLVSDR  153 (255)
Q Consensus       142 ~~~~~~~i~~~~  153 (255)
                      .+|+++.+.+|.
T Consensus       242 ~~G~~i~vdgg~  253 (256)
T PRK08643        242 ITGQTIIVDGGM  253 (256)
T ss_pred             ccCcEEEeCCCe
Confidence            456778776654

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.053  Score=43.67  Aligned_cols=121  Identities=11%  Similarity=0.062  Sum_probs=67.9

Q ss_pred             EEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------
Q 025270           11 LFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------   74 (255)
                      .++.|  +.++.++++++..    .+..++|++||........           +....|+..|...+            
T Consensus       109 ~~~~n--~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~~~~~  175 (263)
T PRK08226        109 HIDIN--IKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD-----------PGETAYALTKAAIVGLTKSLAVEYAQ  175 (263)
T ss_pred             HHhhh--hHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC-----------CCcchHHHHHHHHHHHHHHHHHHhcc
Confidence            34455  8888888887653    3456899999854311000           11234554444321            


Q ss_pred             hCCceEEEecCcccCCCCCC-------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCE
Q 025270           75 NFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNI  146 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~  146 (255)
                      .++.+..++||.+.++....       .....++..+..+.+         ...+...+|+|+++..++.... ..+|++
T Consensus       176 ~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~  246 (263)
T PRK08226        176 SGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP---------LRRLADPLEVGELAAFLASDESSYLTGTQ  246 (263)
T ss_pred             cCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC---------CCCCCCHHHHHHHHHHHcCchhcCCcCce
Confidence            27899999999998763211       001122233322211         1124688999999988886433 234667


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +.+.+|.
T Consensus       247 i~~dgg~  253 (263)
T PRK08226        247 NVIDGGS  253 (263)
T ss_pred             EeECCCc
Confidence            7666553

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.02  Score=47.29  Aligned_cols=112  Identities=13%  Similarity=0.034  Sum_probs=65.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      ++.+++.|  +.++.++++++...   +..+||++||...+....            ....|+.+|...+          
T Consensus       109 ~~~~~~vn--~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaal~~~~~~l~~e~  174 (296)
T PRK05872        109 FRRVIDVN--LLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP------------GMAAYCASKAGVEAFANALRLEV  174 (296)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC------------CchHHHHHHHHHHHHHHHHHHHH
Confidence            44455555  88888888887532   235799999976654321            1245666664432          


Q ss_pred             --hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                        .++.+..+.||.+..+...... .......+....+.+       ...++..+|+++++..++.+..
T Consensus       175 ~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~va~~i~~~~~~~~  236 (296)
T PRK05872        175 AHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWP-------LRRTTSVEKCAAAFVDGIERRA  236 (296)
T ss_pred             HHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCc-------ccCCCCHHHHHHHHHHHHhcCC
Confidence              3789999999988655322110 001112222111111       1235689999999999998664

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.09  E-value=0.015  Score=53.80  Aligned_cols=117  Identities=14%  Similarity=0.158  Sum_probs=61.8

Q ss_pred             HHHHHHhhCC-cceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceEEEecCccc
Q 025270           23 PVADWAKSSG-VKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMI   88 (255)
Q Consensus        23 ~ll~aa~~~~-v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~ilRp~~v~   88 (255)
                      .++..+++.+ -.++|++||.. +++...             ...|+.+|...+            .++.+..++|+.|+
T Consensus       534 ~al~~m~~~~~~g~IV~iSS~~a~~~~~~-------------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       534 EAFRQMREQGLGGNIVFIASKNAVYAGKN-------------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             HHHHHHHhcCCCCEEEEEeChhhcCCCCC-------------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence            3334444443 24799999965 333211             245666664432            27899999999887


Q ss_pred             -CCCCCCCcHHHHHHHH-HcCCCe----eccCCCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEEEecCCCc
Q 025270           89 -GSGNNKDCEEWFFDRI-VRKRPV----PIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRA  154 (255)
Q Consensus        89 -G~~~~~~~~~~~~~~~-~~~~~~----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~i~~~~~  154 (255)
                       |.+.....  ...... ..+...    ..+........+++.+|+|+++..++.... ...|.++++.+|..
T Consensus       601 ~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       601 QGSGIWDGE--WREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             cCccccccc--chhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence             33221110  000000 001000    001111222346889999999999886443 23468898887753

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.04  E-value=0.056  Score=43.68  Aligned_cols=114  Identities=12%  Similarity=0.049  Sum_probs=64.3

Q ss_pred             cccHHHHHHHHh----hCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----h-------hCCceE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----E-------NFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----e-------~~~~~~   80 (255)
                      +.+...++.++.    +.+..+||++||.. .++...             ...|+..|...     .       .++.+.
T Consensus       119 ~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~Y~~sKaal~~l~~~la~e~~~~gi~v~  185 (265)
T PRK07097        119 LNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET-------------VSAYAAAKGGLKMLTKNIASEYGEANIQCN  185 (265)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC-------------CccHHHHHHHHHHHHHHHHHHhhhcCceEE
Confidence            666665555554    44567899999954 333211             13455444432     1       279999


Q ss_pred             EEecCcccCCCCCCCc-------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           81 SFRPQYMIGSGNNKDC-------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++||.+..+......       ...+...+....+         ...+...+|+|..+..++..... ..|+.+.+.++
T Consensus       186 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        186 GIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG  256 (265)
T ss_pred             EEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            9999999876432110       0001111111111         11245689999999999986432 34677777765


Q ss_pred             C
Q 025270          153 R  153 (255)
Q Consensus       153 ~  153 (255)
                      .
T Consensus       257 ~  257 (265)
T PRK07097        257 I  257 (265)
T ss_pred             c
Confidence            4

>TIGR02415 23BDH acetoin reductases

Probab=96.02  E-value=0.018  Score=46.13  Aligned_cols=129  Identities=9%  Similarity=0.020  Sum_probs=64.3

Q ss_pred             ceEEecccCcccHHHHHHHHh----hCC-cceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---h
Q 025270            9 KALFRTNNNFRLQRPVADWAK----SSG-VKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---N   75 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~----~~~-v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~   75 (255)
                      +..++.|  +.++..+++++.    +.+ ..++|++||.. .++....        ..+..+|.+.+.++.    +   .
T Consensus       102 ~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--------~~Y~~sK~a~~~~~~~l~~~~~~~  171 (254)
T TIGR02415       102 KKVYNVN--VKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPIL--------SAYSSTKFAVRGLTQTAAQELAPK  171 (254)
T ss_pred             HHHHhhh--hHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCC--------cchHHHHHHHHHHHHHHHHHhccc
Confidence            3444455  777766665554    323 25899999855 3433211        011123333333322    2   2


Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeec------cCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPI------PGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i------~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                      ++.+.+++||.+..+....     +...........+      +........+...+|+++++..++..... ..|+.+.
T Consensus       172 ~i~v~~v~Pg~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  246 (254)
T TIGR02415       172 GITVNAYCPGIVKTPMWEE-----IDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSIL  246 (254)
T ss_pred             CeEEEEEecCcccChhhhh-----hhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEE
Confidence            6899999999885543111     0000000000000      00000012367889999999999987653 3445555


Q ss_pred             ecCC
Q 025270          149 LVSD  152 (255)
Q Consensus       149 i~~~  152 (255)
                      +.++
T Consensus       247 ~d~g  250 (254)
T TIGR02415       247 VDGG  250 (254)
T ss_pred             ecCC
Confidence            5544

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.035  Score=44.81  Aligned_cols=123  Identities=9%  Similarity=0.059  Sum_probs=66.8

Q ss_pred             cceEEecccCcccHHHHHHHHhh---CCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS---SGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      ++..++.|  +.++..+++++..   .+-.++|++||.... +...             ...|...|...         +
T Consensus       103 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------------~~~Y~asKaa~~~~~~~la~e  167 (261)
T PRK08265        103 WLAALDVN--LVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG-------------RWLYPASKAAIRQLTRSMAMD  167 (261)
T ss_pred             HHHHHhHh--hHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC-------------CchhHHHHHHHHHHHHHHHHH
Confidence            34444555  7777777776653   223579999996543 2211             12344444322         1


Q ss_pred             ---hCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                         .++.+..++||.+..+......  ...........  .    .+  ...+...+|+|+++..++..... ..|+.+.
T Consensus       168 ~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~--~----~p--~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~  239 (261)
T PRK08265        168 LAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP--F----HL--LGRVGDPEEVAQVVAFLCSDAASFVTGADYA  239 (261)
T ss_pred             hcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc--c----CC--CCCccCHHHHHHHHHHHcCccccCccCcEEE
Confidence               2789999999987654211100  00000011000  0    01  11245789999999999976543 3567887


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       240 vdgg~  244 (261)
T PRK08265        240 VDGGY  244 (261)
T ss_pred             ECCCe
Confidence            77664

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.96  E-value=0.095  Score=42.05  Aligned_cols=131  Identities=11%  Similarity=0.083  Sum_probs=71.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      +...++.++++|  +.++..+.+++..    .+ -.++|++||...+......       ..+..+|.+.+.+.+     
T Consensus       103 ~~~~~~~~~~vN--~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------~~Y~asK~a~~~l~~~la~e  173 (251)
T PRK12481        103 GNKDWDDVININ--QKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRV-------PSYTASKSAVMGLTRALATE  173 (251)
T ss_pred             CHHHHHHHheeC--cHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCC-------cchHHHHHHHHHHHHHHHHH
Confidence            344566677777  8887777776643    22 2589999997765432111       112223333322221     


Q ss_pred             --hhCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        .+++.+..++||.+-.+...... .......+...    ++   .  ..+...+|+|+++..++..... ..|+++.+
T Consensus       174 ~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~----~p---~--~~~~~peeva~~~~~L~s~~~~~~~G~~i~v  244 (251)
T PRK12481        174 LSQYNINVNAIAPGYMATDNTAALRADTARNEAILER----IP---A--SRWGTPDDLAGPAIFLSSSASDYVTGYTLAV  244 (251)
T ss_pred             HhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhc----CC---C--CCCcCHHHHHHHHHHHhCccccCcCCceEEE
Confidence              23899999999988554211100 00111111111    11   1  1256789999999999875433 34677777


Q ss_pred             cCC
Q 025270          150 VSD  152 (255)
Q Consensus       150 ~~~  152 (255)
                      .+|
T Consensus       245 dgg  247 (251)
T PRK12481        245 DGG  247 (251)
T ss_pred             CCC
Confidence            655

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.058  Score=43.49  Aligned_cols=120  Identities=9%  Similarity=0.055  Sum_probs=66.8

Q ss_pred             ceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            9 KALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      +..++.|  +.+...+++++..    .+ -.++|++||...+....            ....|+..|...         |
T Consensus       122 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------------~~~~Y~~sKaal~~~~~~la~e  187 (262)
T PRK07831        122 SRVLDVT--LTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH------------GQAHYAAAKAGVMALTRCSALE  187 (262)
T ss_pred             HHHHHHh--hHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC------------CCcchHHHHHHHHHHHHHHHHH
Confidence            3344444  7777777776653    22 34788888854331110            113455444322         2


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         +++.+..++||.+..+.............+....+  +       .-+...+|+|+++..++..... ..|+++.+.
T Consensus       188 ~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~--~-------~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~  258 (262)
T PRK07831        188 AAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREA--F-------GRAAEPWEVANVIAFLASDYSSYLTGEVVSVS  258 (262)
T ss_pred             hCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHcCchhcCcCCceEEeC
Confidence               37899999999998764322111222223322221  1       1255779999999998886543 345666665


Q ss_pred             C
Q 025270          151 S  151 (255)
Q Consensus       151 ~  151 (255)
                      +
T Consensus       259 ~  259 (262)
T PRK07831        259 S  259 (262)
T ss_pred             C
Confidence            4

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.048  Score=43.90  Aligned_cols=124  Identities=10%  Similarity=0.063  Sum_probs=68.8

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+         
T Consensus       110 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~la~e  175 (260)
T PRK07063        110 WRRCFAVD--LDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIP------------GCFPYPVAKHGLLGLTRALGIE  175 (260)
T ss_pred             HHHHHHhh--hHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCC------------CchHHHHHHHHHHHHHHHHHHH
Confidence            34445555  777777777764    34456899999975443211            1134555554321         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCc----HHH-HHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDC----EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~----~~~-~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                         .++.+..++||.+-.+.....+    -.. .........  +     .  .-+...+|+|.++..++..... ..|+
T Consensus       176 l~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~-----~--~r~~~~~~va~~~~fl~s~~~~~itG~  246 (260)
T PRK07063        176 YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ--P-----M--KRIGRPEEVAMTAVFLASDEAPFINAT  246 (260)
T ss_pred             hCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC--C-----C--CCCCCHHHHHHHHHHHcCccccccCCc
Confidence               2789999999988544211100    000 011111111  1     0  1245789999999999876543 3567


Q ss_pred             EEEecCCCc
Q 025270          146 IFNLVSDRA  154 (255)
Q Consensus       146 ~~~i~~~~~  154 (255)
                      .+.+.+|..
T Consensus       247 ~i~vdgg~~  255 (260)
T PRK07063        247 CITIDGGRS  255 (260)
T ss_pred             EEEECCCee
Confidence            777776643

>PRK08589 short chain dehydrogenase; Validated

Probab=95.92  E-value=0.027  Score=45.78  Aligned_cols=125  Identities=6%  Similarity=-0.026  Sum_probs=65.8

Q ss_pred             ceEEecccCcccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            9 KALFRTNNNFRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      +.+++.|  +.++..++++    +++.+ .++|++||...+....            ....|+.+|...+          
T Consensus       108 ~~~~~~n--~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~------------~~~~Y~asKaal~~l~~~la~e~  172 (272)
T PRK08589        108 DKIMAVD--MRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADL------------YRSGYNAAKGAVINFTKSIAIEY  172 (272)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCC------------CCchHHHHHHHHHHHHHHHHHHh
Confidence            3344444  5555444444    44444 5899999976543211            1134665554322          


Q ss_pred             --hCCceEEEecCcccCCCCCCCc---HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                        .++.+..+.||.|..+......   -..+............   +  ...+...+|+|+++..++..... ..|+.+.
T Consensus       173 ~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  247 (272)
T PRK08589        173 GRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT---P--LGRLGKPEEVAKLVVFLASDDSSFITGETIR  247 (272)
T ss_pred             hhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC---C--CCCCcCHHHHHHHHHHHcCchhcCcCCCEEE
Confidence              2799999999998655322100   0000000100000000   1  11256889999999998875433 3467777


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.++.
T Consensus       248 vdgg~  252 (272)
T PRK08589        248 IDGGV  252 (272)
T ss_pred             ECCCc
Confidence            77664

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.028  Score=45.47  Aligned_cols=120  Identities=13%  Similarity=0.087  Sum_probs=67.1

Q ss_pred             EecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hC
Q 025270           12 FRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NF   76 (255)
Q Consensus        12 ~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~   76 (255)
                      ++.|  +.++.++++++...   .-.++|++||...+...            +....|..+|...+            .+
T Consensus       114 ~~~n--~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~------------~~~~~Y~asK~a~~~l~~~la~e~~~~g  179 (264)
T PRK07576        114 VDID--LLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM------------PMQAHVCAAKAGVDMLTRTLALEWGPEG  179 (264)
T ss_pred             HHHH--hHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC------------CCccHHHHHHHHHHHHHHHHHHHhhhcC
Confidence            3445  88888888887642   12489999996543211            11245665554321            26


Q ss_pred             CceEEEecCcccCCCCCCCcHH-HHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           77 SNWASFRPQYMIGSGNNKDCEE-WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +.++.++|+.+.+........+ ......... ..+       ...+...+|+|++++.++..... ..|..+.+.++.
T Consensus       180 i~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        180 IRVNSIVPGPIAGTEGMARLAPSPELQAAVAQ-SVP-------LKRNGTKQDIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             eEEEEEecccccCcHHHhhcccCHHHHHHHHh-cCC-------CCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            8999999998865321110000 011111111 111       12246789999999999985433 345777766654

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.035  Score=44.25  Aligned_cols=90  Identities=18%  Similarity=0.121  Sum_probs=56.1

Q ss_pred             cccHHHHHHHHh----hCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h---hCCceE
Q 025270           18 FRLQRPVADWAK----SSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNWA   80 (255)
Q Consensus        18 ~~~~~~ll~aa~----~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e---~~~~~~   80 (255)
                      +.+..++++++.    +.+.++||++||... ++...            ....|+.+|...         +   .++.++
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~  180 (248)
T PRK08251        113 FVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG------------VKAAYAASKAGVASLGEGLRAELAKTPIKVS  180 (248)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC------------CcccHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            777777776653    456778999999653 33211            013455555432         1   268899


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      .++||.+.++....          . +.          ....+..+|.|++++.++++..
T Consensus       181 ~v~pg~v~t~~~~~----------~-~~----------~~~~~~~~~~a~~i~~~~~~~~  219 (248)
T PRK08251        181 TIEPGYIRSEMNAK----------A-KS----------TPFMVDTETGVKALVKAIEKEP  219 (248)
T ss_pred             EEecCcCcchhhhc----------c-cc----------CCccCCHHHHHHHHHHHHhcCC
Confidence            99999886652211          0 00          1125788999999999998654

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.083  Score=42.50  Aligned_cols=86  Identities=13%  Similarity=0.013  Sum_probs=54.5

Q ss_pred             HHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEEEecCcccC
Q 025270           22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIG   89 (255)
Q Consensus        22 ~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~ilRp~~v~G   89 (255)
                      +.++.++++.+..+||++||...+....            ....|+.+|...            .+++++++++||.+..
T Consensus       127 ~~l~~~~~~~~~~~iv~isS~~g~~~~~------------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t  194 (253)
T PRK07904        127 VLLGEKMRAQGFGQIIAMSSVAGERVRR------------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRT  194 (253)
T ss_pred             HHHHHHHHhcCCceEEEEechhhcCCCC------------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceec
Confidence            4577778777778999999975432110            112355555432            2389999999999876


Q ss_pred             CCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      +....            ...       .  ...+..+|+|+.++.+++++.
T Consensus       195 ~~~~~------------~~~-------~--~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        195 RMSAH------------AKE-------A--PLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             chhcc------------CCC-------C--CCCCCHHHHHHHHHHHHHcCC
Confidence            42110            000       0  113688999999999998764

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.71  E-value=0.022  Score=43.93  Aligned_cols=108  Identities=12%  Similarity=0.089  Sum_probs=63.0

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h--
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E--   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e--   74 (255)
                      ++..++.|  +.++.++++++...  +..+|+++||.......            +....|...|...         |  
T Consensus        79 ~~~~~~~n--~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~  144 (199)
T PRK07578         79 FNVGLQSK--LMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI------------PGGASAATVNGALEGFVKAAALELP  144 (199)
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC------------CCchHHHHHHHHHHHHHHHHHHHcc
Confidence            34445555  88888888887642  22469999885432111            1124455555332         2  


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      .++.+..++||.+-.+..          .  .+..  ..+     ..++..+|+|+++..+++....  |++|+++
T Consensus       145 ~gi~v~~i~Pg~v~t~~~----------~--~~~~--~~~-----~~~~~~~~~a~~~~~~~~~~~~--g~~~~~~  199 (199)
T PRK07578        145 RGIRINVVSPTVLTESLE----------K--YGPF--FPG-----FEPVPAARVALAYVRSVEGAQT--GEVYKVG  199 (199)
T ss_pred             CCeEEEEEcCCcccCchh----------h--hhhc--CCC-----CCCCCHHHHHHHHHHHhcccee--eEEeccC
Confidence            378888999987632210          0  0110  111     1357999999999999986543  6777653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.68  E-value=0.073  Score=42.72  Aligned_cols=130  Identities=12%  Similarity=0.082  Sum_probs=71.5

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------   73 (255)
                      ..+++..++.|  +.++.++++++...    + -.++|++||...+......       ..+..+|.+.+.+.+      
T Consensus       106 ~~~~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------~~Y~~sKaa~~~~~~~la~e~  176 (253)
T PRK08993        106 EKDWDDVMNLN--IKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV-------PSYTASKSGVMGVTRLMANEW  176 (253)
T ss_pred             HHHHHHHHhhh--hHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC-------cchHHHHHHHHHHHHHHHHHh
Confidence            34555666666  88888888776532    2 2479999998766432211       112224444333222      


Q ss_pred             -hhCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 -ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 -e~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                       ..++.+..++||.+-.+...... -......+..  .++.       .-+...+|+|+++..++..... ..|+++.+.
T Consensus       177 ~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d  247 (253)
T PRK08993        177 AKHNINVNAIAPGYMATNNTQQLRADEQRSAEILD--RIPA-------GRWGLPSDLMGPVVFLASSASDYINGYTIAVD  247 (253)
T ss_pred             hhhCeEEEEEeeCcccCcchhhhccchHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence             13789999999998654321100 0001111111  1111       1256679999999999986544 345666665


Q ss_pred             CC
Q 025270          151 SD  152 (255)
Q Consensus       151 ~~  152 (255)
                      ++
T Consensus       248 gg  249 (253)
T PRK08993        248 GG  249 (253)
T ss_pred             CC
Confidence            44

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.051  Score=43.51  Aligned_cols=122  Identities=10%  Similarity=0.053  Sum_probs=67.5

Q ss_pred             ceEEecccCcccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h-
Q 025270            9 KALFRTNNNFRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E-   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e-   74 (255)
                      +..++.|  +.++..++++    +.+.+..++|++||...+.....            ...|+..|...         + 
T Consensus       110 ~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------------~~~Y~~sKaa~~~~~~~la~e~  175 (253)
T PRK06172        110 DAIMGVN--VKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK------------MSIYAASKHAVIGLTKSAAIEY  175 (253)
T ss_pred             HHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------------CchhHHHHHHHHHHHHHHHHHh
Confidence            3344445  6666555443    33445568999999776643211            13455444432         2 


Q ss_pred             --hCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        .++.+..++||.|-.+......  .......+....  +.       ..+...+|++..+..++..... ..|+.+.+
T Consensus       176 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~  246 (253)
T PRK06172        176 AKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMH--PV-------GRIGKVEEVASAVLYLCSDGASFTTGHALMV  246 (253)
T ss_pred             cccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccC--CC-------CCccCHHHHHHHHHHHhCccccCcCCcEEEE
Confidence              2689999999988544321100  011111111111  11       1246789999999999876533 45688888


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       247 dgg~  250 (253)
T PRK06172        247 DGGA  250 (253)
T ss_pred             CCCc
Confidence            7764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.64  E-value=0.02  Score=47.83  Aligned_cols=82  Identities=12%  Similarity=0.136  Sum_probs=47.6

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CC--cceEEEeccccccCCC-C-C--CCCC--------------------CC
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SG--VKQFLFISSAGIYKPA-D-E--PPHV--------------------EG   56 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~--v~r~i~~Ss~~vy~~~-~-~--~~~~--------------------E~   56 (255)
                      .++..+++|  +.++.++++++..    .+  ..|+|++||...+... . .  .+..                    +.
T Consensus       107 ~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (322)
T PRK07453        107 GYELSMATN--HLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADG  184 (322)
T ss_pred             HHHHHHhHH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCc
Confidence            345556666  8777777776653    32  3589999997654211 0 0  0000                    00


Q ss_pred             CCCCCCCChhHHHHHHH---------h----hCCceEEEecCcccCCC
Q 025270           57 DVVKPDAGHVQVEKYIS---------E----NFSNWASFRPQYMIGSG   91 (255)
Q Consensus        57 ~~~~~~~~~y~~ek~~~---------e----~~~~~~ilRp~~v~G~~   91 (255)
                      .+..+ ...|+.+|++.         +    .++.++.+|||.|++..
T Consensus       185 ~~~~~-~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        185 KKFKP-GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             cCCCc-cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            11122 25677777542         2    26899999999998643

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.63  E-value=0.092  Score=42.29  Aligned_cols=121  Identities=11%  Similarity=0.007  Sum_probs=65.0

Q ss_pred             eEEecccCcccHH----HHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h-
Q 025270           10 ALFRTNNNFRLQR----PVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E-   74 (255)
Q Consensus        10 ~~~~~~~n~~~~~----~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e-   74 (255)
                      ..++.|  +.++.    .++..+.+.+ -.++|++||...+...            +....|+..|...         + 
T Consensus       111 ~~~~~N--~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~e~  176 (261)
T PRK08936        111 KVINTN--LTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW------------PLFVHYAASKGGVKLMTETLAMEY  176 (261)
T ss_pred             HHHHHh--hHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC------------CCCcccHHHHHHHHHHHHHHHHHH
Confidence            334444  55544    4455555544 3589999995432211            1123455444221         1 


Q ss_pred             --hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        .++.+..++||.+-.+.....+ .+..........  ++       ..+...+|+++++..++..... ..|..+.+.
T Consensus       177 ~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  247 (261)
T PRK08936        177 APKGIRVNNIGPGAINTPINAEKFADPKQRADVESMI--PM-------GYIGKPEEIAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_pred             hhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHcCcccCCccCcEEEEC
Confidence              2799999999999776432211 111112221111  11       1256789999999998875543 345666665


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      ++.
T Consensus       248 ~g~  250 (261)
T PRK08936        248 GGM  250 (261)
T ss_pred             CCc
Confidence            543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.52  E-value=0.067  Score=42.32  Aligned_cols=108  Identities=12%  Similarity=0.106  Sum_probs=60.0

Q ss_pred             cccHHHHHHHHhhC--CcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEEE
Q 025270           18 FRLQRPVADWAKSS--GVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASF   82 (255)
Q Consensus        18 ~~~~~~ll~aa~~~--~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~il   82 (255)
                      +.+..++++.+...  .-.++|++||... ++...            ....|..+|...            ..+++++++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i  178 (238)
T PRK05786        111 IKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP------------DQLSYAVAKAGLAKAVEILASELLGRGIRVNGI  178 (238)
T ss_pred             chHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            55655556555542  1247999998653 22110            113355444322            128999999


Q ss_pred             ecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ||+.++++.....    ...    .  ....  +   ...+..+|+++++..++..... ..|+.+.+.++
T Consensus       179 ~pg~v~~~~~~~~----~~~----~--~~~~--~---~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        179 APTTISGDFEPER----NWK----K--LRKL--G---DDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG  234 (238)
T ss_pred             ecCccCCCCCchh----hhh----h--hccc--c---CCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence            9999998743211    000    0  0000  1   1246779999999999975443 23566666544

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.048  Score=43.43  Aligned_cols=96  Identities=17%  Similarity=0.121  Sum_probs=58.6

Q ss_pred             EEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------------Hh
Q 025270           11 LFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SE   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------------~e   74 (255)
                      .++.|  +.++.++++++..    .+.+++|++||........            ....|+..|..            ..
T Consensus       103 ~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~el~~  168 (243)
T PRK07102        103 EFRTN--FEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA------------SNYVYGSAKAALTAFLSGLRNRLFK  168 (243)
T ss_pred             HHHhh--hHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC------------CCcccHHHHHHHHHHHHHHHHHhhc
Confidence            34444  8888888877653    4567899999864221110            11234544432            22


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      .++.+..++|+.+.++....             ..  .+  +   ...+..+|+++.++.+++++.
T Consensus       169 ~gi~v~~v~pg~v~t~~~~~-------------~~--~~--~---~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        169 SGVHVLTVKPGFVRTPMTAG-------------LK--LP--G---PLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             cCcEEEEEecCcccChhhhc-------------cC--CC--c---cccCCHHHHHHHHHHHHhCCC
Confidence            37999999999998752111             10  11  0   124678999999999999653

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.12  Score=41.28  Aligned_cols=28  Identities=7%  Similarity=0.198  Sum_probs=20.2

Q ss_pred             eeeHHHHHHHHHHHhcCCCcCCCCEEEe
Q 025270          122 IAHVRDLSSMLTLAVENPEAASSNIFNL  149 (255)
Q Consensus       122 ~i~v~D~a~~~~~~l~~~~~~~~~~~~i  149 (255)
                      +...+|+|+.++.++.......|+.+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            5789999999999998643333455543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.50  E-value=0.059  Score=43.43  Aligned_cols=116  Identities=9%  Similarity=0.040  Sum_probs=58.8

Q ss_pred             HHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCceEEEecCcccCCCCCC
Q 025270           22 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNWASFRPQYMIGSGNNK   94 (255)
Q Consensus        22 ~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~~~ilRp~~v~G~~~~~   94 (255)
                      ..++..+++.+..++|++||.........       ...+..+|.+.+.+++.       .++.+..+.||.+--+....
T Consensus       133 ~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~  205 (260)
T PRK08416        133 QEAAKRMEKVGGGSIISLSSTGNLVYIEN-------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA  205 (260)
T ss_pred             HHHHHhhhccCCEEEEEEeccccccCCCC-------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh
Confidence            33444444444568999999643211110       01122345443333322       27999999998774332110


Q ss_pred             Cc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           95 DC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        95 ~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .. ............+         ..-+...+|+|.+++.++..... ..|+.+.+.++.
T Consensus       206 ~~~~~~~~~~~~~~~~---------~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        206 FTNYEEVKAKTEELSP---------LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             ccCCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            00 0011111111111         11256789999999999875433 346777776653

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.47  E-value=0.13  Score=41.27  Aligned_cols=118  Identities=9%  Similarity=0.046  Sum_probs=64.4

Q ss_pred             cceEEecccCcccHHHHH----HHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            8 FKALFRTNNNFRLQRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll----~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      ++..++.|  +.+...+.    ..+++.+-.+||++||.......            +....|+..|...          
T Consensus       120 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~~  185 (256)
T PRK12859        120 LDKHYMVN--VRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM------------VGELAYAATKGAIDALTSSLAAE  185 (256)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC------------CCchHHHHHHHHHHHHHHHHHHH
Confidence            34445555  66655554    44443334589999997543211            1124455555432          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        ..++.++.++||.+-.+....    .....+....+         ...+...+|+|+++..++..... ..|+++.+.
T Consensus       186 ~~~~~i~v~~v~PG~i~t~~~~~----~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d  252 (256)
T PRK12859        186 VAHLGITVNAINPGPTDTGWMTE----EIKQGLLPMFP---------FGRIGEPKDAARLIKFLASEEAEWITGQIIHSE  252 (256)
T ss_pred             hhhhCeEEEEEEEccccCCCCCH----HHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence              237899999999875542211    11111111111         11235679999999998875433 345666655


Q ss_pred             CC
Q 025270          151 SD  152 (255)
Q Consensus       151 ~~  152 (255)
                      ++
T Consensus       253 gg  254 (256)
T PRK12859        253 GG  254 (256)
T ss_pred             CC
Confidence            54

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.062  Score=43.39  Aligned_cols=114  Identities=9%  Similarity=0.075  Sum_probs=60.9

Q ss_pred             HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------H---hhCCceEEEecCccc
Q 025270           21 QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------S---ENFSNWASFRPQYMI   88 (255)
Q Consensus        21 ~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~---e~~~~~~ilRp~~v~   88 (255)
                      ++.++..+++.+..++|++||...+....            ....|...|..         .   +.++.+..++||.+-
T Consensus       126 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~  193 (265)
T PRK07062        126 TRAFLPLLRASAAASIVCVNSLLALQPEP------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVE  193 (265)
T ss_pred             HHHHHHHHhccCCcEEEEeccccccCCCC------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            44445555555556899999976543211            11234444432         1   237999999999886


Q ss_pred             CCCCCCCc---------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           89 GSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        89 G~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .+.....+         ...+.........++       ...+...+|+|.++..++..... ..|+++.+.+|.
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        194 SGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             cchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            54321100         001111111101111       11256789999999998875432 346788777663

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.049  Score=44.22  Aligned_cols=107  Identities=11%  Similarity=-0.054  Sum_probs=59.7

Q ss_pred             ceEEecccCcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----------
Q 025270            9 KALFRTNNNFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----------   72 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----------   72 (255)
                      +..++.|  +.++.++++++..     ....++|++||...+....            ....|+..|..           
T Consensus       103 ~~~~~~n--~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~e  168 (272)
T PRK07832        103 RRMVDVN--LMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP------------WHAAYSASKFGLRGLSEVLRFD  168 (272)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC------------CCcchHHHHHHHHHHHHHHHHH
Confidence            3344455  8888888888642     2235899999965332111            11335544431           


Q ss_pred             -HhhCCceEEEecCcccCCCCCCCc------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           73 -SENFSNWASFRPQYMIGSGNNKDC------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        73 -~e~~~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                       ..+++.+++++||.+.++......      ..........          ......+..+|+|.+++.++.++
T Consensus       169 ~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        169 LARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             hhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHHHHHHHHHHHHhcC
Confidence             123899999999999876432100      0000000000          00122478999999999999644

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=95.41  E-value=0.062  Score=43.42  Aligned_cols=130  Identities=8%  Similarity=0.103  Sum_probs=68.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENF   76 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~   76 (255)
                      ++.+++.|  +.++..+++++...    +-.++|++||...+......       ..+..+|.+.+.+++       ..+
T Consensus       110 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------~~Y~~sK~a~~~l~~~la~e~~~~g  180 (266)
T PRK06171        110 FDKMFNIN--QKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQ-------SCYAATKAALNSFTRSWAKELGKHN  180 (266)
T ss_pred             HHHHHhhh--chhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC-------chhHHHHHHHHHHHHHHHHHhhhcC
Confidence            34455566  88888888887642    33579999997654321110       011123333222222       137


Q ss_pred             CceEEEecCcccC-CCCCCCc-----------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           77 SNWASFRPQYMIG-SGNNKDC-----------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        77 ~~~~ilRp~~v~G-~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                      +.+..++||.+-. +......           ...+...+......+       ...+...+|+|.++..++..... ..
T Consensus       181 i~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~it  253 (266)
T PRK06171        181 IRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP-------LGRSGKLSEVADLVCYLLSDRASYIT  253 (266)
T ss_pred             eEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc-------CCCCCCHHHhhhheeeeeccccccce
Confidence            9999999998742 1111000           000111111100111       11256779999999999875443 34


Q ss_pred             CCEEEecCCC
Q 025270          144 SNIFNLVSDR  153 (255)
Q Consensus       144 ~~~~~i~~~~  153 (255)
                      |+++++.+|.
T Consensus       254 G~~i~vdgg~  263 (266)
T PRK06171        254 GVTTNIAGGK  263 (266)
T ss_pred             eeEEEecCcc
Confidence            6777776653

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=95.20  E-value=0.056  Score=42.74  Aligned_cols=112  Identities=9%  Similarity=0.039  Sum_probs=67.0

Q ss_pred             CccccceEEecccCcccHHHHHHHH----hhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +...|+..++.|  +.|..++..+.    .+.+-.++|.+||.+ .|.-+.             .+-|++.|+.-.    
T Consensus       101 ~~~dw~~Mid~N--i~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~-------------~~vY~ATK~aV~~fs~  165 (246)
T COG4221         101 DLDDWDRMIDTN--VKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG-------------GAVYGATKAAVRAFSL  165 (246)
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC-------------CccchhhHHHHHHHHH
Confidence            445677788888  77766665554    444445899999965 221111             145666665422    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCc---HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  142 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  142 (255)
                              .+++++.+-||.+-........   -........            ....++..+|+|+++..++++|...
T Consensus       166 ~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         166 GLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             HHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccCCCCCHHHHHHHHHHHHhCCCcc
Confidence                    2789999999887443211100   001111111            1234688999999999999999763

>PRK06139 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.075  Score=44.68  Aligned_cols=105  Identities=17%  Similarity=0.158  Sum_probs=62.3

Q ss_pred             ceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------Hh-
Q 025270            9 KALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------SE-   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~e-   74 (255)
                      +.++++|  +.++.++..++    ++.+..++|++||...+....            ....|..+|..         .| 
T Consensus       109 ~~~~~vN--~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p------------~~~~Y~asKaal~~~~~sL~~El  174 (330)
T PRK06139        109 EQVIQTN--LIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP------------YAAAYSASKFGLRGFSEALRGEL  174 (330)
T ss_pred             HHHHHhh--hHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC------------CchhHHHHHHHHHHHHHHHHHHh
Confidence            3345555  77777766665    344445799999976553211            12456666653         22 


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                         .++.++.+.||.+..+......      . ..+...      .....++..+|+|++++.+++++.
T Consensus       175 ~~~~gI~V~~v~Pg~v~T~~~~~~~------~-~~~~~~------~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        175 ADHPDIHVCDVYPAFMDTPGFRHGA------N-YTGRRL------TPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             CCCCCeEEEEEecCCccCccccccc------c-cccccc------cCCCCCCCHHHHHHHHHHHHhCCC
Confidence               1688999999999776432210      0 011110      111235789999999999998775

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.06  E-value=0.12  Score=41.18  Aligned_cols=105  Identities=11%  Similarity=0.079  Sum_probs=59.5

Q ss_pred             EEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------
Q 025270           11 LFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------   74 (255)
                      .++.|  +.++.++++++    ++.+.++||++||.........            ...|+.+|.+.+            
T Consensus       120 ~~~~n--~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~------------~~~Y~~sK~a~~~~~~~~~~~~~~  185 (247)
T PRK08945        120 VMQVN--VNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN------------WGAYAVSKFATEGMMQVLADEYQG  185 (247)
T ss_pred             HHHHc--cHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC------------CcccHHHHHHHHHHHHHHHHHhcc
Confidence            34445  77777777766    4456789999999654321111            123554443322            


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                      .++.+.+++|+.+-.+....         .....      +   ...+...+|++.++..++..... ..|+++
T Consensus       186 ~~i~~~~v~pg~v~t~~~~~---------~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  241 (247)
T PRK08945        186 TNLRVNCINPGGTRTAMRAS---------AFPGE------D---PQKLKTPEDIMPLYLYLMGDDSRRKNGQSF  241 (247)
T ss_pred             cCEEEEEEecCCccCcchhh---------hcCcc------c---ccCCCCHHHHHHHHHHHhCccccccCCeEE
Confidence            16788899998775442110         00000      0   11256789999999998865543 234444

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.054  Score=43.58  Aligned_cols=104  Identities=14%  Similarity=0.064  Sum_probs=58.4

Q ss_pred             ceEEecccCcccHHHHHHHHh----hCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            9 KALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      +..++.|  +.++.++++++.    ..+..++|++||.. +++...             ...|+.+|...          
T Consensus       102 ~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------~~~Y~~sKaa~~~~~~~l~~~  166 (260)
T PRK08267        102 DRVIDIN--VKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG-------------LAVYSATKFAVRGLTEALDLE  166 (260)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC-------------chhhHHHHHHHHHHHHHHHHH
Confidence            3344445  888888877774    33456899999965 444322             13344444322          


Q ss_pred             --hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                        ..+++++.++||.+-.+..... ..........           ...-.+..+|+|++++.+++..
T Consensus       167 ~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        167 WRRHGIRVADVMPLFVDTAMLDGT-SNEVDAGSTK-----------RLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             hcccCcEEEEEecCCcCCcccccc-cchhhhhhHh-----------hccCCCCHHHHHHHHHHHHhCC
Confidence              1279999999998865432210 0000000000           0011356799999999999754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.00  E-value=0.36  Score=38.69  Aligned_cols=124  Identities=6%  Similarity=-0.008  Sum_probs=69.2

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++..++.|  +.+...+..++...  +-.++|++||.+.....            +....|+++|...+         
T Consensus       109 ~~~~~~~~in--~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~------------~~~~~Y~asKaal~~l~~~la~e  174 (252)
T PRK06079        109 DGYALAQDIS--AYSLIAVAKYARPLLNPGASIVTLTYFGSERAI------------PNYNVMGIAKAALESSVRYLARD  174 (252)
T ss_pred             HHHHHHhCcc--cHHHHHHHHHHHHhcccCceEEEEeccCccccC------------CcchhhHHHHHHHHHHHHHHHHH
Confidence            3455566666  77777777666542  12479999985432110            11234555554322         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .|+.+..+.||.|-.+..... ............  .+.       ..+...+|+|+++..++..... ..|+++.+
T Consensus       175 l~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedva~~~~~l~s~~~~~itG~~i~v  245 (252)
T PRK06079        175 LGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSR--TVD-------GVGVTIEEVGNTAAFLLSDLSTGVTGDIIYV  245 (252)
T ss_pred             hhhcCcEEEEEecCcccccccccCCChHHHHHHHHhc--Ccc-------cCCCCHHHHHHHHHHHhCcccccccccEEEe
Confidence               378999999998865422111 011122222111  111       1256789999999999976433 34677776


Q ss_pred             cCC
Q 025270          150 VSD  152 (255)
Q Consensus       150 ~~~  152 (255)
                      .++
T Consensus       246 dgg  248 (252)
T PRK06079        246 DKG  248 (252)
T ss_pred             CCc
Confidence            655

>PRK06483 dihydromonapterin reductase; Provisional

Probab=94.97  E-value=0.24  Score=39.12  Aligned_cols=120  Identities=8%  Similarity=0.055  Sum_probs=64.6

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .++.+++.|  +.++..+..++..    .+  ..++|++||........            ....|+.+|...+      
T Consensus        97 ~~~~~~~vn--~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------------~~~~Y~asKaal~~l~~~~  162 (236)
T PRK06483         97 VLARMMQIH--VNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD------------KHIAYAASKAALDNMTLSF  162 (236)
T ss_pred             HHHHHHHHc--chHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC------------CCccHHHHHHHHHHHHHHH
Confidence            344455555  7776655555443    33  35799999854321111            1134555554322      


Q ss_pred             ---h--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEe
Q 025270           75 ---N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  149 (255)
Q Consensus        75 ---~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i  149 (255)
                         +  ++.+..++||.+.-+....   ......+....++.         -+...+|+++++..++.. ....|+++.+
T Consensus       163 a~e~~~~irvn~v~Pg~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~~-~~~~G~~i~v  229 (236)
T PRK06483        163 AAKLAPEVKVNSIAPALILFNEGDD---AAYRQKALAKSLLK---------IEPGEEEIIDLVDYLLTS-CYVTGRSLPV  229 (236)
T ss_pred             HHHHCCCcEEEEEccCceecCCCCC---HHHHHHHhccCccc---------cCCCHHHHHHHHHHHhcC-CCcCCcEEEe
Confidence               1  5788999999874221111   11112222221111         134679999999999973 3344688877


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       230 dgg~  233 (236)
T PRK06483        230 DGGR  233 (236)
T ss_pred             Cccc
Confidence            7664

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.097  Score=43.35  Aligned_cols=83  Identities=12%  Similarity=-0.088  Sum_probs=47.3

Q ss_pred             cccceEEecccCccc----HHHHHHHHhhCCcceEEEecccccc--CCCCCCCCCCCCCCCCCCChhHHHHHHHhh----
Q 025270            6 AKFKALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIY--KPADEPPHVEGDVVKPDAGHVQVEKYISEN----   75 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy--~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~----   75 (255)
                      ..++..+++|  +.+    +..++..+++.+.+++|++||.+.+  +.........+.+.. ....|+.+|++.+.    
T Consensus       115 ~~~~~~~~vN--~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~  191 (306)
T PRK06197        115 DGFELQFGTN--HLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN-RVAAYGQSKLANLLFTYE  191 (306)
T ss_pred             CCcchhhhhh--hHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC-cHHHHHHHHHHHHHHHHH
Confidence            3445556666  666    7778888877666799999997643  321111111111111 23568877765432    


Q ss_pred             --------CCceE--EEecCcccCCC
Q 025270           76 --------FSNWA--SFRPQYMIGSG   91 (255)
Q Consensus        76 --------~~~~~--ilRp~~v~G~~   91 (255)
                              ++++.  .+.||.|..+.
T Consensus       192 la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        192 LQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHhhcCCCCeEEEEeCCCcccCcc
Confidence                    44444  45799886553

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.85  E-value=0.27  Score=39.58  Aligned_cols=125  Identities=9%  Similarity=0.045  Sum_probs=69.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++..++.|  +.++..+.+++...  .-.++|++||......     .       +....|+.+|....         
T Consensus       113 ~~~~~~~~iN--~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-----~-------~~~~~Y~asKaal~~l~~~la~e  178 (258)
T PRK07370        113 EGFARALEIS--AYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA-----I-------PNYNVMGVAKAALEASVRYLAAE  178 (258)
T ss_pred             HHHHHHheee--eHHHHHHHHHHHHHHhhCCeEEEEeccccccC-----C-------cccchhhHHHHHHHHHHHHHHHH
Confidence            4456666777  87877777665532  1157999998643211     0       11234665554332         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+..+.||.|-.+..... ........+....  +       ..-+...+|++.++..++..... ..|+++.+
T Consensus       179 l~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~v  249 (258)
T PRK07370        179 LGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKA--P-------LRRTVTQTEVGNTAAFLLSDLASGITGQTIYV  249 (258)
T ss_pred             hCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcC--C-------cCcCCCHHHHHHHHHHHhChhhccccCcEEEE
Confidence               278999999998855421100 0011111111111  1       11256779999999999875443 34677777


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       250 dgg~  253 (258)
T PRK07370        250 DAGY  253 (258)
T ss_pred             CCcc
Confidence            6553

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.72  E-value=0.29  Score=39.48  Aligned_cols=125  Identities=10%  Similarity=0.046  Sum_probs=69.2

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++..++.|  +.+...+.+++...  +-.++|++||....-.     .       +....|.++|....         
T Consensus       111 ~~~~~~~~iN--~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~-----~-------~~~~~Y~asKaal~~l~~~la~e  176 (260)
T PRK06997        111 ENFRIAHDIS--AYSFPALAKAALPMLSDDASLLTLSYLGAERV-----V-------PNYNTMGLAKASLEASVRYLAVS  176 (260)
T ss_pred             HHHHHHHHhh--hHHHHHHHHHHHHhcCCCceEEEEeccccccC-----C-------CCcchHHHHHHHHHHHHHHHHHH
Confidence            3445556666  88877777776542  2257999998653211     0       11234665554322         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+..+.||.+-.+..... ........+...  .++       .-+...+|+++++..++..... ..|+++.+
T Consensus       177 l~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedva~~~~~l~s~~~~~itG~~i~v  247 (260)
T PRK06997        177 LGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESN--APL-------RRNVTIEEVGNVAAFLLSDLASGVTGEITHV  247 (260)
T ss_pred             hcccCeEEEEEeeCccccchhccccchhhHHHHHHhc--Ccc-------cccCCHHHHHHHHHHHhCccccCcceeEEEE
Confidence               278999999998754321110 001111111111  111       1256789999999999986433 44677777


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       248 dgg~  251 (260)
T PRK06997        248 DSGF  251 (260)
T ss_pred             cCCh
Confidence            6654

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.18  Score=39.90  Aligned_cols=101  Identities=10%  Similarity=-0.058  Sum_probs=57.5

Q ss_pred             EEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----hh----CCc
Q 025270           11 LFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----EN----FSN   78 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e~----~~~   78 (255)
                      .+++|  +.++.++++++..    .+..++|++||.......   +    ....+..+|.+.+.++.    +.    ++.
T Consensus       115 ~~~~n--~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---~----~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~  185 (239)
T PRK08703        115 QYRIN--TVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK---A----YWGGFGASKAALNYLCKVAADEWERFGNLR  185 (239)
T ss_pred             HHHHh--hhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC---C----CccchHHhHHHHHHHHHHHHHHhccCCCeE
Confidence            34455  8887777777643    344689999985422110   0    00112234444333322    22    488


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                      +..++||.|+++.....         ..+         .........+|++.++..++..
T Consensus       186 v~~v~pG~v~t~~~~~~---------~~~---------~~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        186 ANVLVPGPINSPQRIKS---------HPG---------EAKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             EEEEecCcccCcccccc---------CCC---------CCccccCCHHHHHHHHHHHhCc
Confidence            99999999988743210         011         1111346889999999998874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.66  E-value=0.22  Score=41.26  Aligned_cols=134  Identities=9%  Similarity=0.034  Sum_probs=71.9

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--------C---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--------G---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--------~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e   74 (255)
                      ..++.++++|  +.++.++++++...        +   -.++|++||...+....            ....|+..|...+
T Consensus       111 ~~~~~~~~vn--~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaal~  176 (306)
T PRK07792        111 EEWDAVIAVH--LRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV------------GQANYGAAKAGIT  176 (306)
T ss_pred             HHHHHHHHHh--hhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC------------CCchHHHHHHHHH
Confidence            3444555566  88888888876421        1   14799999866442211            1134555554322


Q ss_pred             ------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 ------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 ------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                                  +++.+..+.|+.  ...    ..    ..+....+ ...   .....++..+|++.++..++..... 
T Consensus       177 ~l~~~la~e~~~~gI~vn~i~Pg~--~t~----~~----~~~~~~~~-~~~---~~~~~~~~pe~va~~v~~L~s~~~~~  242 (306)
T PRK07792        177 ALTLSAARALGRYGVRANAICPRA--RTA----MT----ADVFGDAP-DVE---AGGIDPLSPEHVVPLVQFLASPAAAE  242 (306)
T ss_pred             HHHHHHHHHhhhcCeEEEEECCCC--CCc----hh----hhhccccc-hhh---hhccCCCCHHHHHHHHHHHcCccccC
Confidence                        378888888862  111    00    01111100 000   0112345789999999888865432 


Q ss_pred             CCCCEEEecCC------------------CccCHHHHHHHHHHH
Q 025270          142 ASSNIFNLVSD------------------RAVTLDGMAKLCAQA  167 (255)
Q Consensus       142 ~~~~~~~i~~~------------------~~~s~~el~~~i~~~  167 (255)
                      ..|++|.+.++                  ..++..|+.+.+.+.
T Consensus       243 ~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (306)
T PRK07792        243 VNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDY  286 (306)
T ss_pred             CCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHH
Confidence            34566666543                  235666666666665

>PRK05693 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.23  Score=40.32  Aligned_cols=61  Identities=11%  Similarity=-0.138  Sum_probs=37.8

Q ss_pred             cccHHHHHHHHhh---CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------hhCCceEEE
Q 025270           18 FRLQRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASF   82 (255)
Q Consensus        18 ~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e~~~~~~il   82 (255)
                      +.++.++++++..   .+..++|++||...+....            ....|..+|...            ..++.++.+
T Consensus       104 ~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v  171 (274)
T PRK05693        104 VFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEV  171 (274)
T ss_pred             hHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence            7777777777643   2335799999865332111            113455555321            238999999


Q ss_pred             ecCcccCC
Q 025270           83 RPQYMIGS   90 (255)
Q Consensus        83 Rp~~v~G~   90 (255)
                      +||.|..+
T Consensus       172 ~pg~v~t~  179 (274)
T PRK05693        172 QPGAIASQ  179 (274)
T ss_pred             ecCccccc
Confidence            99999765

>PRK05867 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.24  Score=39.68  Aligned_cols=128  Identities=14%  Similarity=0.063  Sum_probs=68.3

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~   75 (255)
                      ++..++.|  +.++..+++++..    .+ -.++|++||....-..  .+.   ....+..+|.+.+.+.+.       .
T Consensus       110 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~~---~~~~Y~asKaal~~~~~~la~e~~~~  182 (253)
T PRK05867        110 FQRLQNTN--VTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--VPQ---QVSHYCASKAAVIHLTKAMAVELAPH  182 (253)
T ss_pred             HHHHHHhc--chhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--CCC---CccchHHHHHHHHHHHHHHHHHHhHh
Confidence            34445555  8888888777653    22 2368999886432110  000   001112233333322222       2


Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      |+.+..++||.+-.+....  .......+....+  .       ..+...+|+|+++..++..... ..|+++.+.+|.
T Consensus       183 gI~vn~i~PG~v~t~~~~~--~~~~~~~~~~~~~--~-------~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        183 KIRVNSVSPGYILTELVEP--YTEYQPLWEPKIP--L-------GRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             CeEEEEeecCCCCCccccc--chHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCc
Confidence            7999999999886553221  1111122221111  1       1256789999999999875433 356888777664

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.34  E-value=0.45  Score=38.66  Aligned_cols=126  Identities=10%  Similarity=0.046  Sum_probs=69.0

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .+.++.+++.|  +.++.+++.++...  +-.++|++||.+.....            +....|+++|...         
T Consensus       110 ~~~~~~~~~vn--~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~------------~~~~~Y~asKaAl~~l~r~la~  175 (271)
T PRK06505        110 RENFSRTMVIS--CFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM------------PNYNVMGVAKAALEASVRYLAA  175 (271)
T ss_pred             HHHHHHHHhhh--hhhHHHHHHHHHHhhccCceEEEEcCCCccccC------------CccchhhhhHHHHHHHHHHHHH
Confidence            34455566666  88877777766532  11479999986532110            1113355444332         


Q ss_pred             h---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           74 E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        74 e---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                      |   .++.+..+.||.+-.+..... ............  .++       .-+...+|+|++++.++..... ..|+.+.
T Consensus       176 el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~peeva~~~~fL~s~~~~~itG~~i~  246 (271)
T PRK06505        176 DYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRN--SPL-------RRTVTIDEVGGSALYLLSDLSSGVTGEIHF  246 (271)
T ss_pred             HHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhc--CCc-------cccCCHHHHHHHHHHHhCccccccCceEEe
Confidence            2   379999999998865432110 000111111111  111       1145789999999999875433 3467777


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.++.
T Consensus       247 vdgG~  251 (271)
T PRK06505        247 VDSGY  251 (271)
T ss_pred             ecCCc
Confidence            77664

>PRK05866 short chain dehydrogenase; Provisional

Probab=94.34  E-value=0.14  Score=42.22  Aligned_cols=92  Identities=8%  Similarity=0.003  Sum_probs=54.9

Q ss_pred             cccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceEE
Q 025270           18 FRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~i   81 (255)
                      +.+..++++++    ++.+..++|++||.+++....           +....|+.+|...+            .++.++.
T Consensus       151 ~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~  219 (293)
T PRK05866        151 YYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS-----------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTT  219 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC-----------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            66655555544    456667999999976654211           11244665554421            2789999


Q ss_pred             EecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           82 FRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        82 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                      ++||.+=.+....            ..  .  ..+   ...+..+++|+.++.++++.
T Consensus       220 v~pg~v~T~~~~~------------~~--~--~~~---~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        220 LYYPLVATPMIAP------------TK--A--YDG---LPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             EEcCcccCccccc------------cc--c--ccC---CCCCCHHHHHHHHHHHHhcC
Confidence            9998664432110            00  0  001   12468899999999999865

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.33  E-value=0.29  Score=39.52  Aligned_cols=125  Identities=10%  Similarity=0.031  Sum_probs=67.4

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      +.++.+++.|  +.+...++.++...  .-.++|++||.......   +         ....|+.+|...          
T Consensus       112 ~~~~~~~~vn--~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~---~---------~~~~Y~asKaal~~l~~~la~e  177 (260)
T PRK06603        112 ENFHNSLHIS--CYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI---P---------NYNVMGVAKAALEASVKYLAND  177 (260)
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHhhhccCceEEEEecCccccCC---C---------cccchhhHHHHHHHHHHHHHHH
Confidence            3445556666  77777777765422  11479999985532110   0         113344444322          


Q ss_pred             --hhCCceEEEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           74 --ENFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        ..++.+..+.||.+-.+.... .........+....  +     .  .-+...+|+|+++..++..... ..|+.+.+
T Consensus       178 l~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-----~--~r~~~pedva~~~~~L~s~~~~~itG~~i~v  248 (260)
T PRK06603        178 MGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATA--P-----L--KRNTTQEDVGGAAVYLFSELSKGVTGEIHYV  248 (260)
T ss_pred             hhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcC--C-----c--CCCCCHHHHHHHHHHHhCcccccCcceEEEe
Confidence              237899999999885442110 00011111111111  1     1  1246789999999999986443 34577777


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       249 dgG~  252 (260)
T PRK06603        249 DCGY  252 (260)
T ss_pred             CCcc
Confidence            6653

>PRK07201 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.12  Score=47.57  Aligned_cols=98  Identities=8%  Similarity=-0.012  Sum_probs=61.1

Q ss_pred             ceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            9 KALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      +.+++.|  +.++.+++.++    ++.+..++|++||.+.+....            ..+.|+.+|...+          
T Consensus       475 ~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~  540 (657)
T PRK07201        475 ERTMAVN--YFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP------------RFSAYVASKAALDAFSDVAASET  540 (657)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC------------CcchHHHHHHHHHHHHHHHHHHH
Confidence            3444555  77766665554    445667899999988775321            1244665554322          


Q ss_pred             --hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                        .++.++.++||.|..+.....            .   .+    .....+..+++|+.++..+.+.
T Consensus       541 ~~~~i~v~~v~pg~v~T~~~~~~------------~---~~----~~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        541 LSDGITFTTIHMPLVRTPMIAPT------------K---RY----NNVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HhhCCcEEEEECCcCcccccCcc------------c---cc----cCCCCCCHHHHHHHHHHHHHhC
Confidence              379999999999876532211            0   00    0112468999999999988654

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.19  E-value=0.086  Score=41.93  Aligned_cols=68  Identities=12%  Similarity=-0.005  Sum_probs=41.3

Q ss_pred             cceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++..+.+.+    .+.+.+++|++||...+....            ....|...|.+.+         
T Consensus       102 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~~~~  167 (243)
T PRK07023        102 IARAVGLN--VAAPLMLTAALAQAASDAAERRILHISSGAARNAYA------------GWSVYCATKAALDHHARAVALD  167 (243)
T ss_pred             HHHHeeee--ehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC------------CchHHHHHHHHHHHHHHHHHhc
Confidence            44556666  77755554444    444557899999976553211            1245665554322         


Q ss_pred             --hCCceEEEecCcccC
Q 025270           75 --NFSNWASFRPQYMIG   89 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G   89 (255)
                        .++.+..++||.+-.
T Consensus       168 ~~~~i~v~~v~pg~~~t  184 (243)
T PRK07023        168 ANRALRIVSLAPGVVDT  184 (243)
T ss_pred             CCCCcEEEEecCCcccc
Confidence              278899999987733

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.10  E-value=0.42  Score=38.48  Aligned_cols=124  Identities=10%  Similarity=0.064  Sum_probs=68.5

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----------   73 (255)
                      +.++.+++.|  +.+...+.+++...  .-.++|++||......     .       +....|+.+|...          
T Consensus       114 ~~~~~~~~vN--~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-----~-------~~~~~Y~asKaal~~l~~~la~e  179 (258)
T PRK07533        114 EGFALAMDVS--CHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-----V-------ENYNLMGPVKAALESSVRYLAAE  179 (258)
T ss_pred             HHHHHHHhhh--hHHHHHHHHHHHHHhccCCEEEEEeccccccC-----C-------ccchhhHHHHHHHHHHHHHHHHH
Confidence            3455566666  88877777766532  1147999988543211     0       1123455555432          


Q ss_pred             --hhCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           74 --ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        74 --e~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        ..++.+..+.||.+-.+..... .............  ++       ..+...+|+|.+++.++..... ..|+.+.+
T Consensus       180 l~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~p~dva~~~~~L~s~~~~~itG~~i~v  250 (258)
T PRK07533        180 LGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERA--PL-------RRLVDIDDVGAVAAFLASDAARRLTGNTLYI  250 (258)
T ss_pred             hhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcC--Cc-------CCCCCHHHHHHHHHHHhChhhccccCcEEee
Confidence              1378999999998855421110 0111122222111  11       1256789999999999875433 34677766


Q ss_pred             cCC
Q 025270          150 VSD  152 (255)
Q Consensus       150 ~~~  152 (255)
                      .++
T Consensus       251 dgg  253 (258)
T PRK07533        251 DGG  253 (258)
T ss_pred             CCc
Confidence            655

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.06  E-value=0.089  Score=39.10  Aligned_cols=72  Identities=10%  Similarity=0.045  Sum_probs=44.4

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHH---HhhCCceEE
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYI---SENFSNWAS   81 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~---~e~~~~~~i   81 (255)
                      +.++..++.|  +.++.+++++++..+.+++|++||... ++....        ..+..++...+.++   ...+++++.
T Consensus       103 ~~~~~~~~~n--~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~--------~~y~~sk~~~~~~~~~~~~~~~~~~~  172 (180)
T smart00822      103 ERFAAVLAPK--VDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ--------ANYAAANAFLDALAAHRRARGLPATS  172 (180)
T ss_pred             HHHHHhhchH--hHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc--------hhhHHHHHHHHHHHHHHHhcCCceEE
Confidence            3345556666  999999999998878788999998653 332211        01111232333332   233788888


Q ss_pred             EecCcc
Q 025270           82 FRPQYM   87 (255)
Q Consensus        82 lRp~~v   87 (255)
                      +.||.+
T Consensus       173 ~~~g~~  178 (180)
T smart00822      173 INWGAW  178 (180)
T ss_pred             Eeeccc
Confidence            888765

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=93.95  E-value=0.36  Score=39.02  Aligned_cols=119  Identities=13%  Similarity=0.041  Sum_probs=65.0

Q ss_pred             EEecccCcccHHHHHHHHhhCC----------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270           11 LFRTNNNFRLQRPVADWAKSSG----------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~----------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .++.|  +.++..+++++....          ..++|.+||......     .       +....|+++|...+      
T Consensus       122 ~~~~N--~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~-----~-------~~~~~Y~asK~a~~~~~~~l  187 (267)
T TIGR02685       122 LFGSN--AIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQP-----L-------LGFTMYTMAKHALEGLTRSA  187 (267)
T ss_pred             HHHhh--hHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCC-----C-------cccchhHHHHHHHHHHHHHH
Confidence            34445  777777777654321          135777776432211     1       11234555554322      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            .|+.++.++||.+..+.....   .........  .++   +   ..+...+|++++++.++..... ..|+.+
T Consensus       188 a~e~~~~gi~v~~v~PG~~~~~~~~~~---~~~~~~~~~--~~~---~---~~~~~~~~va~~~~~l~~~~~~~~~G~~~  256 (267)
T TIGR02685       188 ALELAPLQIRVNGVAPGLSLLPDAMPF---EVQEDYRRK--VPL---G---QREASAEQIADVVIFLVSPKAKYITGTCI  256 (267)
T ss_pred             HHHHhhhCeEEEEEecCCccCccccch---hHHHHHHHh--CCC---C---cCCCCHHHHHHHHHHHhCcccCCcccceE
Confidence                  379999999998865532211   111111111  111   0   1235789999999999876543 356777


Q ss_pred             EecCCCc
Q 025270          148 NLVSDRA  154 (255)
Q Consensus       148 ~i~~~~~  154 (255)
                      .+.++..
T Consensus       257 ~v~gg~~  263 (267)
T TIGR02685       257 KVDGGLS  263 (267)
T ss_pred             EECCcee
Confidence            7776643

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06953 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.37  Score=37.74  Aligned_cols=112  Identities=9%  Similarity=0.031  Sum_probs=62.1

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC---CcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----CC
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----FS   77 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----~~   77 (255)
                      .++..++.|  +.++.++++++...   +-.++|++||.. .++.....+     ...+..+|.+.+.++...     ++
T Consensus        95 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~-----~~~Y~~sK~a~~~~~~~~~~~~~~i  167 (222)
T PRK06953         95 DFDAVMHTN--VLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTT-----GWLYRASKAALNDALRAASLQARHA  167 (222)
T ss_pred             HHHHHHhhh--hhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCC-----ccccHHhHHHHHHHHHHHhhhccCc
Confidence            345555666  88999999888742   224688888854 554322110     001222444444333322     56


Q ss_pred             ceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                      .+..++||.+.-+...                     +    ...+..++.++.+..++..... ..+..|...
T Consensus       168 ~v~~v~Pg~i~t~~~~---------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (222)
T PRK06953        168 TCIALHPGWVRTDMGG---------------------A----QAALDPAQSVAGMRRVIAQATRRDNGRFFQYD  216 (222)
T ss_pred             EEEEECCCeeecCCCC---------------------C----CCCCCHHHHHHHHHHHHHhcCcccCceEEeeC
Confidence            7888898877554211                     0    1135778888888887765543 233444443

>PRK06125 short chain dehydrogenase; Provisional

Probab=93.81  E-value=0.091  Score=42.26  Aligned_cols=124  Identities=10%  Similarity=0.062  Sum_probs=66.1

Q ss_pred             ccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            7 KFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .++..++.|  +.+...+++++    ++.+-.++|++||.....     +.       +....|.+.|...         
T Consensus       104 ~~~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----~~-------~~~~~y~ask~al~~~~~~la~  169 (259)
T PRK06125        104 AWRAGWELK--VFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----PD-------ADYICGSAGNAALMAFTRALGG  169 (259)
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----CC-------CCchHhHHHHHHHHHHHHHHHH
Confidence            344455556  77777777665    333335799998854221     10       0112344444332         


Q ss_pred             ---hhCCceEEEecCcccCCCCCCCc---------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           74 ---ENFSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                         ..++.+..+.||.+-.+......         ...........  .+       ..-+...+|+|++++.++.....
T Consensus       170 e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~~~l~~~~~~  240 (259)
T PRK06125        170 KSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG--LP-------LGRPATPEEVADLVAFLASPRSG  240 (259)
T ss_pred             HhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc--CC-------cCCCcCHHHHHHHHHHHcCchhc
Confidence               12789999999887654211000         00000011100  00       11256889999999999875433


Q ss_pred             -CCCCEEEecCCC
Q 025270          142 -ASSNIFNLVSDR  153 (255)
Q Consensus       142 -~~~~~~~i~~~~  153 (255)
                       .+|..+.+.+|.
T Consensus       241 ~~~G~~i~vdgg~  253 (259)
T PRK06125        241 YTSGTVVTVDGGI  253 (259)
T ss_pred             cccCceEEecCCe
Confidence             356777777664

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.79  E-value=0.34  Score=39.46  Aligned_cols=126  Identities=10%  Similarity=0.051  Sum_probs=69.5

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      +.++..++.|  +.++..+++++...  +-.++|++||.+....     .       |....|+.+|...         |
T Consensus       114 ~~~~~~~~vN--~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----~-------p~~~~Y~asKaal~~l~~~la~e  179 (272)
T PRK08159        114 DNFTMTMDIS--VYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-----M-------PHYNVMGVAKAALEASVKYLAVD  179 (272)
T ss_pred             HHHHHHHhHH--HHHHHHHHHHHHHhcCCCceEEEEeccccccC-----C-------CcchhhhhHHHHHHHHHHHHHHH
Confidence            3455566666  88888888776643  2257999998543211     0       1113355555432         1


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.+..+.||.+-.+......-.......... ..++       ..+...+|+|++++.++..... ..|+++.+.
T Consensus       180 l~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~p~-------~r~~~peevA~~~~~L~s~~~~~itG~~i~vd  251 (272)
T PRK08159        180 LGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEY-NAPL-------RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVD  251 (272)
T ss_pred             hcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHh-CCcc-------cccCCHHHHHHHHHHHhCccccCccceEEEEC
Confidence               278999999998854311100000001111110 1111       1246789999999999975443 356788777


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +|.
T Consensus       252 gG~  254 (272)
T PRK08159        252 SGY  254 (272)
T ss_pred             CCc
Confidence            774

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.64  E-value=0.27  Score=43.14  Aligned_cols=121  Identities=8%  Similarity=0.064  Sum_probs=68.2

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCc----ceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHH----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGV----KQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYI----------   72 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v----~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~----------   72 (255)
                      ++.+++.|  +.++.++.+++.....    .+||++||...+ +..             ....|+..|..          
T Consensus       308 ~~~~~~~n--~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-------------~~~~Y~asKaal~~~~~~la~  372 (450)
T PRK08261        308 WDSVLAVN--LLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-------------GQTNYAASKAGVIGLVQALAP  372 (450)
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------------CChHHHHHHHHHHHHHHHHHH
Confidence            44445555  8899999999876432    589999996643 321             12456666642          


Q ss_pred             --HhhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           73 --SENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        73 --~e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        .+.++.+..+.||.+-.+....  .+.......... ..+ .      ...-.+|+++++..++..... .+|+++.+
T Consensus       373 el~~~gi~v~~v~PG~i~t~~~~~--~~~~~~~~~~~~-~~l-~------~~~~p~dva~~~~~l~s~~~~~itG~~i~v  442 (450)
T PRK08261        373 LLAERGITINAVAPGFIETQMTAA--IPFATREAGRRM-NSL-Q------QGGLPVDVAETIAWLASPASGGVTGNVVRV  442 (450)
T ss_pred             HHhhhCcEEEEEEeCcCcchhhhc--cchhHHHHHhhc-CCc-C------CCCCHHHHHHHHHHHhChhhcCCCCCEEEE
Confidence              1237899999999764321110  111111111110 011 1      112356999999998875432 34678877


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       443 ~g~~  446 (450)
T PRK08261        443 CGQS  446 (450)
T ss_pred             CCCc
Confidence            6543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=93.58  E-value=0.86  Score=36.65  Aligned_cols=123  Identities=13%  Similarity=0.061  Sum_probs=69.2

Q ss_pred             cceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----H----hh
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S----EN   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~----e~   75 (255)
                      ++.+++.|  +.++..+++++...   .-.++|++||...+.....            ...|+.+|..     +    +.
T Consensus       109 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------~~~Y~~sK~a~~~~~~~la~el  174 (263)
T PRK06200        109 FDEIFNVN--VKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG------------GPLYTASKHAVVGLVRQLAYEL  174 (263)
T ss_pred             HHHHeeec--cHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC------------CchhHHHHHHHHHHHHHHHHHH
Confidence            45566777  88888888777632   1247999999776532211            1234444432     2    11


Q ss_pred             --CCceEEEecCcccCCCCCCC----------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC-Cc-
Q 025270           76 --FSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EA-  141 (255)
Q Consensus        76 --~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~~-  141 (255)
                        ++.+..+.||.+..+.....          ..+..... .... .+       ..-+...+|++.++..++... .. 
T Consensus       175 ~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~p-------~~r~~~~~eva~~~~fl~s~~~~~~  245 (263)
T PRK06200        175 APKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADM-IAAI-TP-------LQFAPQPEDHTGPYVLLASRRNSRA  245 (263)
T ss_pred             hcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHH-hhcC-CC-------CCCCCCHHHHhhhhhheecccccCc
Confidence              58889999998865422110          00000111 1111 11       123567899999999998755 33 


Q ss_pred             CCCCEEEecCCC
Q 025270          142 ASSNIFNLVSDR  153 (255)
Q Consensus       142 ~~~~~~~i~~~~  153 (255)
                      ..|+.+.+.+|.
T Consensus       246 itG~~i~vdgG~  257 (263)
T PRK06200        246 LTGVVINADGGL  257 (263)
T ss_pred             ccceEEEEcCce
Confidence            346777776653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.55  E-value=0.59  Score=37.72  Aligned_cols=128  Identities=7%  Similarity=0.034  Sum_probs=65.7

Q ss_pred             cceEEecccCcccHHHHHHHHhh---CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~---~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~   77 (255)
                      ++..++.|  +.+...+.+++..   .+-.++|++||.........       ...+..+|.+...+.+       ..++
T Consensus       113 ~~~~~~vn--~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~-------~~~Y~asKaal~~l~~~la~e~~~~gI  183 (261)
T PRK08690        113 FNTAHEIS--AYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN-------YNVMGMAKASLEAGIRFTAACLGKEGI  183 (261)
T ss_pred             HHHHHHhc--hHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC-------cccchhHHHHHHHHHHHHHHHhhhcCe
Confidence            34444555  7776666655432   12247999998654321100       0111223333322221       2379


Q ss_pred             ceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           78 NWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .+..+.||.|--+..... ........+....  ++       ..+...+|+|+++..++..... ..|+++.+.+|.
T Consensus       184 rVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        184 RCNGISAGPIKTLAASGIADFGKLLGHVAAHN--PL-------RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             EEEEEecCcccchhhhcCCchHHHHHHHhhcC--CC-------CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            999999998855421110 0011111111111  11       1256789999999999986533 346777776664

>PRK07791 short chain dehydrogenase; Provisional

Probab=93.54  E-value=0.32  Score=39.93  Aligned_cols=122  Identities=11%  Similarity=0.092  Sum_probs=67.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----C---C---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----S---G---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~---~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--   73 (255)
                      ..++.+++.|  +.++..+++++..    .   +   -.++|++||........            ....|+.+|...  
T Consensus       114 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~  179 (286)
T PRK07791        114 EEWDAVIAVH--LKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV------------GQGNYSAAKAGIAA  179 (286)
T ss_pred             HHHHHHHHHc--cHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC------------CchhhHHHHHHHHH
Confidence            3455556666  8887777766642    1   1   14799999965432111            123456555432  


Q ss_pred             ----------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 ----------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 ----------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                                ..++.+..+.|+ +--+     ........+....       +.....+...+|+|++++.++..... .
T Consensus       180 l~~~la~el~~~gIrVn~v~Pg-~~T~-----~~~~~~~~~~~~~-------~~~~~~~~~pedva~~~~~L~s~~~~~i  246 (286)
T PRK07791        180 LTLVAAAELGRYGVTVNAIAPA-ARTR-----MTETVFAEMMAKP-------EEGEFDAMAPENVSPLVVWLGSAESRDV  246 (286)
T ss_pred             HHHHHHHHHHHhCeEEEEECCC-CCCC-----cchhhHHHHHhcC-------cccccCCCCHHHHHHHHHHHhCchhcCC
Confidence                      237899999997 4211     1111111211111       01111345789999999998875433 3


Q ss_pred             CCCEEEecCCCc
Q 025270          143 SSNIFNLVSDRA  154 (255)
Q Consensus       143 ~~~~~~i~~~~~  154 (255)
                      .|+.+.+.+|..
T Consensus       247 tG~~i~vdgG~~  258 (286)
T PRK07791        247 TGKVFEVEGGKI  258 (286)
T ss_pred             CCcEEEEcCCce
Confidence            467777776653

>PRK09072 short chain dehydrogenase; Provisional

Probab=93.25  E-value=0.33  Score=39.05  Aligned_cols=96  Identities=10%  Similarity=0.000  Sum_probs=56.4

Q ss_pred             CcccHHHHHHHHhh----CCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHH---------h---hCCce
Q 025270           17 NFRLQRPVADWAKS----SGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYIS---------E---NFSNW   79 (255)
Q Consensus        17 n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e---~~~~~   79 (255)
                      |+.++.++++++..    .+..++|++||...+ +..             ....|+.+|...         +   .++.+
T Consensus       111 n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v  177 (263)
T PRK09072        111 NLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-------------GYASYCASKFALRGFSEALRRELADTGVRV  177 (263)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-------------CccHHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            38888888888753    334578888885432 221             124466555532         1   26889


Q ss_pred             EEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      +.+.||.+-.+....         .. ..   ..  ..........+|+|++++.++++..
T Consensus       178 ~~v~Pg~~~t~~~~~---------~~-~~---~~--~~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        178 LYLAPRATRTAMNSE---------AV-QA---LN--RALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             EEEecCcccccchhh---------hc-cc---cc--ccccCCCCCHHHHHHHHHHHHhCCC
Confidence            999998775442110         00 00   00  0001135678999999999999764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.01  E-value=0.55  Score=38.29  Aligned_cols=126  Identities=8%  Similarity=-0.022  Sum_probs=68.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      +.++.+++.|  +.+...+.+++...  .-.++|++||.+....     .       +....|+.+|...         |
T Consensus       109 ~~~~~~~~vN--~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-----~-------~~~~~Y~asKaal~~l~~~la~e  174 (274)
T PRK08415        109 EAFNIAMEIS--VYSLIELTRALLPLLNDGASVLTLSYLGGVKY-----V-------PHYNVMGVAKAALESSVRYLAVD  174 (274)
T ss_pred             HHHHHHhhhh--hHHHHHHHHHHHHHhccCCcEEEEecCCCccC-----C-------CcchhhhhHHHHHHHHHHHHHHH
Confidence            3455566677  87777777666542  1147999998542211     0       1123455555432         1


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.+..+.||.|-.+......-......... ...++       .-+...+|+|.++..++..... ..|+.+.+.
T Consensus       175 l~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~pl-------~r~~~pedva~~v~fL~s~~~~~itG~~i~vd  246 (274)
T PRK08415        175 LGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNE-INAPL-------KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVD  246 (274)
T ss_pred             hhhcCeEEEEEecCccccHHHhccchhhHHhhhhh-hhCch-------hccCCHHHHHHHHHHHhhhhhhcccccEEEEc
Confidence               27899999999886532110000000000000 00111       1246789999999999875433 346777777


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +|.
T Consensus       247 GG~  249 (274)
T PRK08415        247 AGY  249 (274)
T ss_pred             Ccc
Confidence            664

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.94  E-value=0.74  Score=37.05  Aligned_cols=121  Identities=9%  Similarity=-0.023  Sum_probs=63.2

Q ss_pred             ceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------   74 (255)
                      +..++.|  +.+...+++++...  .-.++|++||....-.     .       +....|+++|....            
T Consensus       116 ~~~~~~n--~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~-------~~~~~Y~asKaal~~l~~~la~el~~  181 (257)
T PRK08594        116 LLAQNIS--AYSLTAVAREAKKLMTEGGSIVTLTYLGGERV-----V-------QNYNVMGVAKASLEASVKYLANDLGK  181 (257)
T ss_pred             HHHHhhh--HHHHHHHHHHHHHhcccCceEEEEcccCCccC-----C-------CCCchhHHHHHHHHHHHHHHHHHhhh
Confidence            3344444  66666666555532  1247999998643211     0       11134555554322            


Q ss_pred             hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++.+..+.||.+-.+..... ........+...  .+       ...+...+|+|+++..++..... ..|+.+.+.+|
T Consensus       182 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        182 DGIRVNAISAGPIRTLSAKGVGGFNSILKEIEER--AP-------LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             cCCEEeeeecCcccCHhHhhhccccHHHHHHhhc--CC-------ccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence            278999999998855421100 000011111110  01       11246789999999998875443 34577766655

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=92.67  E-value=1  Score=36.12  Aligned_cols=33  Identities=6%  Similarity=0.117  Sum_probs=24.4

Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCc
Q 025270          122 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  154 (255)
Q Consensus       122 ~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~  154 (255)
                      +...+|+|+++..++..... ..|++..+.+|..
T Consensus       221 ~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        221 TGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCceEeecCCcC
Confidence            56789999999999986543 3567777776653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.66  E-value=1.2  Score=36.00  Aligned_cols=124  Identities=11%  Similarity=0.030  Sum_probs=65.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      .++..++.|  +.+...+.+++...  +-.++|++||.+....     .       +....|+++|...+          
T Consensus       112 ~~~~~~~~n--~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~-----~-------~~~~~Y~asKaal~~l~~~la~el  177 (262)
T PRK07984        112 GFKIAHDIS--SYSFVAMAKACRSMLNPGSALLTLSYLGAERA-----I-------PNYNVMGLAKASLEANVRYMANAM  177 (262)
T ss_pred             HHHHHhhhh--hHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC-----C-------CCcchhHHHHHHHHHHHHHHHHHh
Confidence            344455555  77766666665421  1147999988643211     1       11134555554322          


Q ss_pred             --hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 --NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        .++.+..+.||.+--+..... ........+....  +       ..-+...+|++.++..++..... ..|+.+.+.
T Consensus       178 ~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~r~~~pedva~~~~~L~s~~~~~itG~~i~vd  248 (262)
T PRK07984        178 GPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--P-------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD  248 (262)
T ss_pred             cccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcC--C-------CcCCCCHHHHHHHHHHHcCcccccccCcEEEEC
Confidence              278999999998754311100 0001111111111  1       11256889999999999876433 346777776


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      ++.
T Consensus       249 gg~  251 (262)
T PRK07984        249 GGF  251 (262)
T ss_pred             CCc
Confidence            653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=92.49  E-value=0.75  Score=35.30  Aligned_cols=136  Identities=7%  Similarity=0.060  Sum_probs=78.4

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC----Ccc--eEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhC
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS----GVK--QFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF   76 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~--r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~   76 (255)
                      +.++||.++.+|  +.|+..+-+++.+.    +..  ++|.+||.- -.|+-....+...-.-.-. -...+.|-++..+
T Consensus       110 kq~qwd~vi~vN--L~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIg-ftktaArEla~kn  186 (256)
T KOG1200|consen  110 KQEQWDSVIAVN--LTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIG-FTKTAARELARKN  186 (256)
T ss_pred             cHHHHHHHHHhh--chhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceee-eeHHHHHHHhhcC
Confidence            456788888888  88888877777654    222  799999943 2222111000000000000 1123444455569


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      +++-.+-||.|--|. +....+..+.++...-|+--         +-..+|+|..+..+...... ..|..+.+.+|
T Consensus       187 IrvN~VlPGFI~tpM-T~~mp~~v~~ki~~~iPmgr---------~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  187 IRVNVVLPGFIATPM-TEAMPPKVLDKILGMIPMGR---------LGEAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             ceEeEeccccccChh-hhhcCHHHHHHHHccCCccc---------cCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence            999999999886653 22244455666665443322         34678999999988854443 23567777665

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=92.31  E-value=0.61  Score=38.84  Aligned_cols=37  Identities=19%  Similarity=0.101  Sum_probs=23.1

Q ss_pred             ccceEEecccCcccHHHHHHH----HhhCC--cceEEEecccccc
Q 025270            7 KFKALFRTNNNFRLQRPVADW----AKSSG--VKQFLFISSAGIY   45 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~a----a~~~~--v~r~i~~Ss~~vy   45 (255)
                      .++.++++|  +.+...++.+    .++.+  ..|+|++||...+
T Consensus       105 ~~~~~~~vN--~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~  147 (314)
T TIGR01289       105 GFELSVGTN--HLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN  147 (314)
T ss_pred             HHHHHHhhh--hhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence            345556666  7776555444    44432  3589999997764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=92.17  E-value=0.24  Score=39.77  Aligned_cols=107  Identities=10%  Similarity=0.018  Sum_probs=56.1

Q ss_pred             ceEEecccCcccHHHHHHHHh----hC-C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            9 KALFRTNNNFRLQRPVADWAK----SS-G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~----~~-~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      +..++.|  +.++..+..++.    +. + -.++|++||...+...            +....|+.+|...+        
T Consensus       115 ~~~~~vN--~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~asKaal~~l~~~la~  180 (256)
T TIGR01500       115 QNYWALN--LTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF------------KGWALYCAGKAARDMLFQVLAL  180 (256)
T ss_pred             HHHHHhh--hHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC------------CCchHHHHHHHHHHHHHHHHHH
Confidence            3455555  777655555443    22 2 2479999997644211            11234665554332        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcH-----HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                          .++.+..+.||.+-.+.... ..     +.....+....         ....+...+|+|.+++.++++.
T Consensus       181 e~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~p~eva~~~~~l~~~~  244 (256)
T TIGR01500       181 EEKNPNVRVLNYAPGVLDTDMQQQ-VREESVDPDMRKGLQELK---------AKGKLVDPKVSAQKLLSLLEKD  244 (256)
T ss_pred             HhcCCCeEEEEecCCcccchHHHH-HHHhcCChhHHHHHHHHH---------hcCCCCCHHHHHHHHHHHHhcC
Confidence                26888899998874431100 00     00000000000         0012578899999999999744

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05855 short chain dehydrogenase; Validated

Probab=92.08  E-value=0.18  Score=45.48  Aligned_cols=70  Identities=11%  Similarity=0.074  Sum_probs=44.8

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++.++++|  +.++.++++++.    +.+ -.++|++||.+.|....            ....|+.+|...+       
T Consensus       415 ~~~~~~~~n--~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l~  480 (582)
T PRK05855        415 DWDRVLDVN--LWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR------------SLPAYATSKAAVLMLSECLR  480 (582)
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC------------CCcHHHHHHHHHHHHHHHHH
Confidence            344445555  888888777654    333 24899999988775322            1245666665322       


Q ss_pred             -----hCCceEEEecCcccCC
Q 025270           75 -----NFSNWASFRPQYMIGS   90 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~   90 (255)
                           .|+.++.++||.|-.+
T Consensus       481 ~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        481 AELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             HHhcccCcEEEEEEeCCCccc
Confidence                 3899999999988443

>PRK06484 short chain dehydrogenase; Validated

Probab=91.67  E-value=0.6  Score=41.74  Aligned_cols=123  Identities=13%  Similarity=0.079  Sum_probs=63.6

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----Cc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----GV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      .++..++.|  +.++..+++++...    +- .++|++||.........            ...|..+|...        
T Consensus       104 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~------------~~~Y~asKaal~~l~~~la  169 (520)
T PRK06484        104 EFARLQAIN--LTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK------------RTAYSASKAAVISLTRSLA  169 (520)
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC------------CchHHHHHHHHHHHHHHHH
Confidence            344455555  78877777777642    32 38999999654422111            13344444332        


Q ss_pred             -h---hCCceEEEecCcccCCCCCCCcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           74 -E---NFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        74 -e---~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                       |   .++.++.++||.+-.+......- ........... ++       ...+...+|++.++..++..... ..|+++
T Consensus       170 ~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~va~~v~~l~~~~~~~~~G~~~  241 (520)
T PRK06484        170 CEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR-IP-------LGRLGRPEEIAEAVFFLASDQASYITGSTL  241 (520)
T ss_pred             HHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc-CC-------CCCCcCHHHHHHHHHHHhCccccCccCceE
Confidence             2   27899999999875543211000 00000000000 00       11245789999999988875432 234555


Q ss_pred             EecC
Q 025270          148 NLVS  151 (255)
Q Consensus       148 ~i~~  151 (255)
                      .+.+
T Consensus       242 ~~~g  245 (520)
T PRK06484        242 VVDG  245 (520)
T ss_pred             EecC
Confidence            4443

>PLN02780 ketoreductase/ oxidoreductase

Probab=91.25  E-value=0.2  Score=41.91  Aligned_cols=97  Identities=12%  Similarity=0.008  Sum_probs=57.6

Q ss_pred             ceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            9 KALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      +.++++|  +.++.++.+++.    +.+..++|++||...+....          .|....|+++|...+          
T Consensus       159 ~~~~~vN--~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------~p~~~~Y~aSKaal~~~~~~L~~El  226 (320)
T PLN02780        159 KNLIKVN--VEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS----------DPLYAVYAATKAYIDQFSRCLYVEY  226 (320)
T ss_pred             HHHHHHh--HHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC----------CccchHHHHHHHHHHHHHHHHHHHH
Confidence            3345555  777777777654    34556899999976542110          012356777775432          


Q ss_pred             --hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                        .|+.+..+.||.|-.+....           ...        .  ......+++|+.++..+.+
T Consensus       227 ~~~gI~V~~v~PG~v~T~~~~~-----------~~~--------~--~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        227 KKSGIDVQCQVPLYVATKMASI-----------RRS--------S--FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             hccCeEEEEEeeCceecCcccc-----------cCC--------C--CCCCCHHHHHHHHHHHhCC
Confidence              27899999999875432110           000        0  1124678888888888853

>PRK06940 short chain dehydrogenase; Provisional

Probab=90.97  E-value=1.6  Score=35.56  Aligned_cols=135  Identities=9%  Similarity=0.016  Sum_probs=70.2

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCC-----C---CCCCCCC--------CC--CCCCChhH
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPAD-----E---PPHVEGD--------VV--KPDAGHVQ   67 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~-----~---~~~~E~~--------~~--~~~~~~y~   67 (255)
                      ++.+++.|  +.++.++++++...  .-.++|++||........     .   ...+..+        +.  .+....|+
T Consensus        93 ~~~~~~vN--~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  170 (275)
T PRK06940         93 PEAILKVD--LYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQ  170 (275)
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhH
Confidence            34445555  88988888888653  113456666654321110     0   0000000        00  01224577


Q ss_pred             HHHHHHh------------hCCceEEEecCcccCCCCCCCc---HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHH
Q 025270           68 VEKYISE------------NFSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  132 (255)
Q Consensus        68 ~ek~~~e------------~~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  132 (255)
                      .+|...+            .++.+..+.||.+-.+......   .......+....  ++       .-+...+|+|.++
T Consensus       171 asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~peeia~~~  241 (275)
T PRK06940        171 IAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS--PA-------GRPGTPDEIAALA  241 (275)
T ss_pred             HHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC--Cc-------ccCCCHHHHHHHH
Confidence            7775422            2789999999988765321100   001112221111  11       1257889999999


Q ss_pred             HHHhcCCCc-CCCCEEEecCCC
Q 025270          133 TLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       133 ~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      ..++..... ..|+++.+.++.
T Consensus       242 ~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        242 EFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             HHHcCcccCcccCceEEEcCCe
Confidence            998875433 346777776664

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.97  E-value=1.5  Score=35.22  Aligned_cols=121  Identities=6%  Similarity=-0.088  Sum_probs=63.3

Q ss_pred             ceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------h
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------E   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e   74 (255)
                      +.++++|  +.+...+..++...  .-.++|++|+....+.             +....|+.+|...            .
T Consensus       114 ~~~~~vN--~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~-------------~~~~~Y~asKaal~~l~~~la~el~~  178 (256)
T PRK07889        114 ATALHVS--AYSLKSLAKALLPLMNEGGSIVGLDFDATVAW-------------PAYDWMGVAKAALESTNRYLARDLGP  178 (256)
T ss_pred             HHHHHHH--hHHHHHHHHHHHHhcccCceEEEEeecccccC-------------CccchhHHHHHHHHHHHHHHHHHhhh
Confidence            3345555  77777666665532  1146888875321110             1113355555432            2


Q ss_pred             hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .++.+..+.||.+-.+...... .......+....  ++      .+.+...+|+|++++.++..... ..|+++.+.++
T Consensus       179 ~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~------~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        179 RGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERA--PL------GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             cCeEEEeeccCcccChhhhcccCcHHHHHHHHhcC--cc------ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            3789999999988554211100 001111111111  10      01356889999999999986543 34677777655

>PRK08278 short chain dehydrogenase; Provisional

Probab=90.66  E-value=1.1  Score=36.35  Aligned_cols=106  Identities=11%  Similarity=0.027  Sum_probs=58.2

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++...    +-.++|++||.......   .       .+....|+.+|...+         
T Consensus       114 ~~~~~~vN--~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---~-------~~~~~~Y~~sK~a~~~~~~~la~e  181 (273)
T PRK08278        114 FDLMQQIN--VRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---W-------FAPHTAYTMAKYGMSLCTLGLAEE  181 (273)
T ss_pred             HHHHHHHh--chHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---c-------cCCcchhHHHHHHHHHHHHHHHHH
Confidence            34445555  89999999998642    23478888875321110   0       011234554444332         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                         .++.+..+.|+.+..-        .+.+....+.        .....+...+|+|++++.++.....
T Consensus       182 l~~~~I~v~~i~Pg~~i~t--------~~~~~~~~~~--------~~~~~~~~p~~va~~~~~l~~~~~~  235 (273)
T PRK08278        182 FRDDGIAVNALWPRTTIAT--------AAVRNLLGGD--------EAMRRSRTPEIMADAAYEILSRPAR  235 (273)
T ss_pred             hhhcCcEEEEEeCCCcccc--------HHHHhccccc--------ccccccCCHHHHHHHHHHHhcCccc
Confidence               2788999999743221        1111111111        1112356889999999999986543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=90.06  E-value=0.15  Score=40.52  Aligned_cols=124  Identities=10%  Similarity=0.116  Sum_probs=70.9

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----------   72 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----------   72 (255)
                      +.++..++.|  +.+...+++++...  .-.++|++||........            ....|+..|..           
T Consensus        99 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~------------~~~~y~~sKaal~~l~r~lA~e  164 (241)
T PF13561_consen   99 EDWDKTFDIN--VFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP------------GYSAYSASKAALEGLTRSLAKE  164 (241)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST------------TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHhhCCCcccccchhhcccCc------------cchhhHHHHHHHHHHHHHHHHH
Confidence            3445555555  77777777766442  125799999865432211            12356655543           


Q ss_pred             -Hh-hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           73 -SE-NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        73 -~e-~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                       .. +|+++-.+.||.+-.+..... ....+...+....+  +     .  .+...+|+|.++..++..... ..|+++.
T Consensus       165 l~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~p--l-----~--r~~~~~evA~~v~fL~s~~a~~itG~~i~  235 (241)
T PF13561_consen  165 LAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIP--L-----G--RLGTPEEVANAVLFLASDAASYITGQVIP  235 (241)
T ss_dssp             HGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHST--T-----S--SHBEHHHHHHHHHHHHSGGGTTGTSEEEE
T ss_pred             hccccCeeeeeecccceeccchhccccccchhhhhhhhhc--c-----C--CCcCHHHHHHHHHHHhCccccCccCCeEE
Confidence             23 578999999988764421100 11222223332221  1     1  145899999999999986533 4567887


Q ss_pred             ecCC
Q 025270          149 LVSD  152 (255)
Q Consensus       149 i~~~  152 (255)
                      +-+|
T Consensus       236 vDGG  239 (241)
T PF13561_consen  236 VDGG  239 (241)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            7765

...

>PRK05884 short chain dehydrogenase; Provisional

Probab=89.64  E-value=1.2  Score=35.01  Aligned_cols=107  Identities=6%  Similarity=0.058  Sum_probs=63.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----------   73 (255)
                      .++.+++.|  +.++.++++++...  .-.++|++||..   .    +         ....|.++|...           
T Consensus        97 ~~~~~~~~N--~~~~~~~~~~~~~~~~~~g~Iv~isS~~---~----~---------~~~~Y~asKaal~~~~~~la~e~  158 (223)
T PRK05884         97 AWRNALDAT--VLSAVLTVQSVGDHLRSGGSIISVVPEN---P----P---------AGSAEAAIKAALSNWTAGQAAVF  158 (223)
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHhhcCCeEEEEecCC---C----C---------CccccHHHHHHHHHHHHHHHHHh
Confidence            344555566  88888888777642  124799999854   0    0         113455555432           


Q ss_pred             -hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           74 -ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        74 -e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                       ..++.+..+.||.+-.+.         .... . .   .   +     .-..+|+++++..++..... ..|+++.+.+
T Consensus       159 ~~~gI~v~~v~PG~v~t~~---------~~~~-~-~---~---p-----~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdg  216 (223)
T PRK05884        159 GTRGITINAVACGRSVQPG---------YDGL-S-R---T---P-----PPVAAEIARLALFLTTPAARHITGQTLHVSH  216 (223)
T ss_pred             hhcCeEEEEEecCccCchh---------hhhc-c-C---C---C-----CCCHHHHHHHHHHHcCchhhccCCcEEEeCC
Confidence             137899999999875331         0110 0 0   0   0     12679999999998875443 3567777766


Q ss_pred             CC
Q 025270          152 DR  153 (255)
Q Consensus       152 ~~  153 (255)
                      |.
T Consensus       217 g~  218 (223)
T PRK05884        217 GA  218 (223)
T ss_pred             Ce
Confidence            54

>PRK05854 short chain dehydrogenase; Provisional

Probab=89.26  E-value=0.84  Score=38.00  Aligned_cols=82  Identities=11%  Similarity=-0.113  Sum_probs=44.9

Q ss_pred             cccceEEecccCcccHHHHHHHHhh---CCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS---SGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~---~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      ..++..+++|  +.+...+...+..   .+..|+|++||... ++......+.++.+.. ....|+.+|.+..       
T Consensus       114 ~~~e~~~~vN--~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK~a~~~~~~~la  190 (313)
T PRK05854        114 DGFELQFGTN--HLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYA-GMRAYSQSKIAVGLFALELD  190 (313)
T ss_pred             ccHHHHhhhh--hHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCc-chhhhHHHHHHHHHHHHHHH
Confidence            3445556666  7776555555441   22358999999764 3322212222222222 2245776665421       


Q ss_pred             -------hCCceEEEecCcccCC
Q 025270           75 -------NFSNWASFRPQYMIGS   90 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~   90 (255)
                             .++.+..+.||.|-.+
T Consensus       191 ~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        191 RRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             HHhhcCCCCeEEEEEecceeccC
Confidence                   2588899999988554

>PLN00015 protochlorophyllide reductase

Probab=87.98  E-value=1.3  Score=36.66  Aligned_cols=37  Identities=22%  Similarity=0.093  Sum_probs=22.8

Q ss_pred             ccceEEecccCcccHHHH----HHHHhhCC--cceEEEecccccc
Q 025270            7 KFKALFRTNNNFRLQRPV----ADWAKSSG--VKQFLFISSAGIY   45 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~l----l~aa~~~~--v~r~i~~Ss~~vy   45 (255)
                      .++.++++|  +.++..+    +..+++.+  ..++|++||...+
T Consensus        99 ~~~~~~~vN--~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         99 GFELSVGTN--HLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            345566666  6665555    44454443  3689999997543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=85.57  E-value=1.7  Score=35.21  Aligned_cols=105  Identities=12%  Similarity=0.004  Sum_probs=64.1

Q ss_pred             ceEEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            9 KALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      ...+++|  +.+    |..++.-..+.+-.++|.++|.+-|-...            ..+-|+++|....          
T Consensus       109 ~~mi~lN--~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p------------~~avY~ATKa~v~~fSeaL~~EL  174 (265)
T COG0300         109 EEMIQLN--ILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP------------YMAVYSATKAFVLSFSEALREEL  174 (265)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc------------chHHHHHHHHHHHHHHHHHHHHh
Confidence            3444555  444    45555555566666899999977653321            2367888885422          


Q ss_pred             --hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                        +|+.++.+.||.+.-+...           ..+.....   .....-++..+|+|+..+..+++...
T Consensus       175 ~~~gV~V~~v~PG~~~T~f~~-----------~~~~~~~~---~~~~~~~~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         175 KGTGVKVTAVCPGPTRTEFFD-----------AKGSDVYL---LSPGELVLSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             cCCCeEEEEEecCcccccccc-----------cccccccc---ccchhhccCHHHHHHHHHHHHhcCCc
Confidence              3799999999866543221           11111111   01124478899999999999998764

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=85.48  E-value=2.2  Score=33.50  Aligned_cols=59  Identities=8%  Similarity=0.048  Sum_probs=35.5

Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++.+..+.||.+-.+....         +....    +     ...++..+|+|+++..++..... ..|..+.+.++
T Consensus       172 ~i~v~~v~PG~v~t~~~~~---------~~~~~----~-----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        172 HGVVLALHPGTTDTALSKP---------FQQNV----P-----KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             CeEEEEEcccceecCCCcc---------hhhcc----c-----cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            5678888998886653221         00010    1     11246889999999999987643 23455554443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=84.36  E-value=4.5  Score=33.79  Aligned_cols=87  Identities=16%  Similarity=0.039  Sum_probs=50.4

Q ss_pred             cccceEEecc--cCcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCCCCCCCCCC-hhHHHHHHHh-------
Q 025270            6 AKFKALFRTN--NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAG-HVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~--~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~~~~~~~~~-~y~~ek~~~e-------   74 (255)
                      +..+..+.+|  .....+..|+..++.+...|+|++||..- +.. .-..+..+....+... .|+.+|++.-       
T Consensus       134 DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~  212 (314)
T KOG1208|consen  134 DGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELA  212 (314)
T ss_pred             cchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHH
Confidence            4466777777  34455777777788776569999999654 111 0001111111001111 2776665531       


Q ss_pred             --h--CCceEEEecCcccCCCCC
Q 025270           75 --N--FSNWASFRPQYMIGSGNN   93 (255)
Q Consensus        75 --~--~~~~~ilRp~~v~G~~~~   93 (255)
                        .  |+.+..+.||.+-.+...
T Consensus       213 k~l~~~V~~~~~hPG~v~t~~l~  235 (314)
T KOG1208|consen  213 KRLKKGVTTYSVHPGVVKTTGLS  235 (314)
T ss_pred             HHhhcCceEEEECCCccccccee
Confidence              1  789999999999877433

>PRK05599 hypothetical protein; Provisional

Probab=84.22  E-value=2.7  Score=33.49  Aligned_cols=53  Identities=19%  Similarity=0.244  Sum_probs=32.4

Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      ++.+..+.||.+..+...             +.. +.   + .   ....+|+|++++.++.+...  ++.+.+.+
T Consensus       172 ~I~v~~v~PG~v~T~~~~-------------~~~-~~---~-~---~~~pe~~a~~~~~~~~~~~~--~~~~~~~~  224 (246)
T PRK05599        172 HVRLIIARPGFVIGSMTT-------------GMK-PA---P-M---SVYPRDVAAAVVSAITSSKR--STTLWIPG  224 (246)
T ss_pred             CceEEEecCCcccchhhc-------------CCC-CC---C-C---CCCHHHHHHHHHHHHhcCCC--CceEEeCc
Confidence            788889999877554211             100 00   0 0   14679999999999997643  24454443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=83.70  E-value=8.9  Score=31.77  Aligned_cols=127  Identities=8%  Similarity=-0.014  Sum_probs=67.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .+.++.++++|  +.+..+++.++...  .-.++|.+||....-..   |.        ....|+++|...         
T Consensus       142 ~e~~~~~~~vN--l~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~---p~--------~~~~Y~asKaAl~~lt~~la~  208 (299)
T PRK06300        142 RKGYLAALSTS--SYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV---PG--------YGGGMSSAKAALESDTKVLAW  208 (299)
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcC---CC--------ccHHHHHHHHHHHHHHHHHHH
Confidence            34455566666  77777777777643  11368888874432110   10        001456555432         


Q ss_pred             h----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           74 E----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        74 e----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                      |    .|+.+..+.||.+--+..... ............  .++       ..+...+|++.++..++..... ..|+++
T Consensus       209 el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i  279 (299)
T PRK06300        209 EAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDW--APL-------PEPMEAEQVGAAAAFLVSPLASAITGETL  279 (299)
T ss_pred             HhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            2    268899999987754421110 001111111111  111       1245789999999998875433 346777


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      .+.++.
T Consensus       280 ~vdGG~  285 (299)
T PRK06300        280 YVDHGA  285 (299)
T ss_pred             EECCCc
Confidence            776653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=83.34  E-value=11  Score=30.75  Aligned_cols=139  Identities=11%  Similarity=0.083  Sum_probs=74.1

Q ss_pred             ccCccccceEEecccCccc-HHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            2 EFNYAKFKALFRTNNNFRL-QRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~-~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      |.+.+.||.+++.|  +.| ...+..++..    .+-..++++||..-+......+      ..+..+|.+...+.+.  
T Consensus       108 ~~s~e~~d~~~~~N--l~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~------~~Y~~sK~al~~ltr~lA  179 (270)
T KOG0725|consen  108 DLSEEVFDKIMATN--LRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG------VAYGVSKAALLQLTRSLA  179 (270)
T ss_pred             hCCHHHHHHHHhhh--chhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc------ccchhHHHHHHHHHHHHH
Confidence            56777888888888  874 4555544443    2344688888865443211110      1122344443333322  


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcC--CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK--RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                           +++++-.+-||.|..+...............+.  ....++     .-.+.-.+|++..+..++..... ..|+.
T Consensus       180 ~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-----~gr~g~~~eva~~~~fla~~~asyitG~~  254 (270)
T KOG0725|consen  180 KELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-----LGRVGTPEEVAEAAAFLASDDASYITGQT  254 (270)
T ss_pred             HHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-----cCCccCHHHHHHhHHhhcCcccccccCCE
Confidence                 389999999998887651111111001111111  111111     11256789999999988887544 33566


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      ..+.++.
T Consensus       255 i~vdgG~  261 (270)
T KOG0725|consen  255 IIVDGGF  261 (270)
T ss_pred             EEEeCCE
Confidence            6665554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=82.58  E-value=1.6  Score=36.00  Aligned_cols=73  Identities=11%  Similarity=0.113  Sum_probs=41.2

Q ss_pred             ceEEecc--cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------hCCce
Q 025270            9 KALFRTN--NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------NFSNW   79 (255)
Q Consensus         9 d~~~~~~--~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------~~~~~   79 (255)
                      ..++++|  ..+..|..++-..++++ .|+|++||..-  ... .|.    .-.+-.+|++.|.+...       +|+.+
T Consensus       132 ~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G--R~~-~p~----~g~Y~~SK~aVeaf~D~lR~EL~~fGV~V  203 (322)
T KOG1610|consen  132 RKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG--RVA-LPA----LGPYCVSKFAVEAFSDSLRRELRPFGVKV  203 (322)
T ss_pred             HHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc--Ccc-Ccc----cccchhhHHHHHHHHHHHHHHHHhcCcEE
Confidence            3445556  34444556666666665 48999999542  110 000    01122366666665432       39999


Q ss_pred             EEEecCcccCC
Q 025270           80 ASFRPQYMIGS   90 (255)
Q Consensus        80 ~ilRp~~v~G~   90 (255)
                      .++-|| +|-.
T Consensus       204 siiePG-~f~T  213 (322)
T KOG1610|consen  204 SIIEPG-FFKT  213 (322)
T ss_pred             EEeccC-cccc
Confidence            999999 4443

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=82.35  E-value=10  Score=31.44  Aligned_cols=127  Identities=6%  Similarity=-0.043  Sum_probs=67.5

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------   73 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------   73 (255)
                      +.+.++.+++.|  +.+...+.+++...   + .++|++||.........           ....|..+|...       
T Consensus       142 ~~e~~~~~~~vN--~~~~~~l~~~~~p~m~~~-G~II~isS~a~~~~~p~-----------~~~~Y~asKaAl~~l~~~l  207 (303)
T PLN02730        142 SRKGYLAAISAS--SYSFVSLLQHFGPIMNPG-GASISLTYIASERIIPG-----------YGGGMSSAKAALESDTRVL  207 (303)
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHhcC-CEEEEEechhhcCCCCC-----------CchhhHHHHHHHHHHHHHH
Confidence            344556666667  77766666665532   2 47999998653321100           002355555332       


Q ss_pred             --h----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           74 --E----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        74 --e----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                        |    .++.+..+-||.+--+..... ............  .++     .  .+...+|++.++..++..... ..|+
T Consensus       208 a~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~--~pl-----~--r~~~peevA~~~~fLaS~~a~~itG~  278 (303)
T PLN02730        208 AFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYAN--APL-----Q--KELTADEVGNAAAFLASPLASAITGA  278 (303)
T ss_pred             HHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhc--CCC-----C--CCcCHHHHHHHHHHHhCccccCccCC
Confidence              2    367888999987755432110 001111111111  111     1  245789999999999975443 3457


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      .+.+.++.
T Consensus       279 ~l~vdGG~  286 (303)
T PLN02730        279 TIYVDNGL  286 (303)
T ss_pred             EEEECCCc
Confidence            77666553

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=82.04  E-value=0.81  Score=34.74  Aligned_cols=62  Identities=10%  Similarity=0.011  Sum_probs=42.3

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------hhCCce
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------ENFSNW   79 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------e~~~~~   79 (255)
                      +.++...  +.++.+|.++.....++.||.+||.+ ++|...             +..|++.....        ..+.++
T Consensus       106 ~~~~~~K--v~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g-------------q~~YaaAN~~lda~a~~~~~~g~~~  170 (181)
T PF08659_consen  106 DAVLAPK--VRGLWNLHEALENRPLDFFILFSSISSLLGGPG-------------QSAYAAANAFLDALARQRRSRGLPA  170 (181)
T ss_dssp             HHHHHHH--HHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT-------------BHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred             HHHHhhh--hhHHHHHHHHhhcCCCCeEEEECChhHhccCcc-------------hHhHHHHHHHHHHHHHHHHhCCCCE
Confidence            3444445  88999999999988899999999966 666643             25666444332        337888


Q ss_pred             EEEecC
Q 025270           80 ASFRPQ   85 (255)
Q Consensus        80 ~ilRp~   85 (255)
                      +.+..+
T Consensus       171 ~sI~wg  176 (181)
T PF08659_consen  171 VSINWG  176 (181)
T ss_dssp             EEEEE-
T ss_pred             EEEEcc
Confidence            887755

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=81.34  E-value=3.7  Score=32.90  Aligned_cols=124  Identities=10%  Similarity=0.134  Sum_probs=67.5

Q ss_pred             cceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~   75 (255)
                      ++..++.|  +.++.++++++...   +-.++|++||...+....            ....|+.+|...+         .
T Consensus       108 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~~sKaa~~~l~~~la~e~  173 (262)
T TIGR03325       108 FDEVFHIN--VKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG------------GGPLYTAAKHAVVGLVKELAFEL  173 (262)
T ss_pred             HHHhheee--cHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC------------CCchhHHHHHHHHHHHHHHHHhh
Confidence            45666777  99998888888653   114688888765332111            1123554443322         2


Q ss_pred             --CCceEEEecCcccCCCCCCCcH---H----HH-HHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-c-CC
Q 025270           76 --FSNWASFRPQYMIGSGNNKDCE---E----WF-FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-A-AS  143 (255)
Q Consensus        76 --~~~~~ilRp~~v~G~~~~~~~~---~----~~-~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~-~~  143 (255)
                        .+.+..+.||.+..+.......   .    .+ .....+.. .+       ..-+...+|+|+++..++.... . ..
T Consensus       174 ~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p-------~~r~~~p~eva~~~~~l~s~~~~~~~t  245 (262)
T TIGR03325       174 APYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV-LP-------IGRMPDAEEYTGAYVFFATRGDTVPAT  245 (262)
T ss_pred             ccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc-CC-------CCCCCChHHhhhheeeeecCCCccccc
Confidence              3778899999886653221000   0    00 11111111 11       1125578999999998887532 2 34


Q ss_pred             CCEEEecCCC
Q 025270          144 SNIFNLVSDR  153 (255)
Q Consensus       144 ~~~~~i~~~~  153 (255)
                      |+++.+.+|.
T Consensus       246 G~~i~vdgg~  255 (262)
T TIGR03325       246 GAVLNYDGGM  255 (262)
T ss_pred             ceEEEecCCe
Confidence            6777776653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08177 short chain dehydrogenase; Provisional

Probab=80.19  E-value=5.8  Score=30.95  Aligned_cols=72  Identities=18%  Similarity=0.116  Sum_probs=39.1

Q ss_pred             cceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      +...+..|  +.++.++++++...   +..+++++||..  +.....+.       .....|+.+|...+          
T Consensus        97 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~~~~-------~~~~~Y~~sK~a~~~~~~~l~~e~  165 (225)
T PRK08177         97 IGQLFLTN--AIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVELPDG-------GEMPLYKASKAALNSMTRSFVAEL  165 (225)
T ss_pred             Hhhheeee--eeHHHHHHHHHHHhhhhcCCEEEEEccCc--cccccCCC-------CCccchHHHHHHHHHHHHHHHHHh
Confidence            34445555  88888888877542   224688888742  22111100       01123554443322          


Q ss_pred             --hCCceEEEecCcccCC
Q 025270           75 --NFSNWASFRPQYMIGS   90 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~   90 (255)
                        .++.+..++||.+-.+
T Consensus       166 ~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        166 GEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             hcCCeEEEEEcCCceecC
Confidence              2678999999977544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	255
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		9e-04

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 91/242 (37%), Gaps = 21/242 (8%)
Query: 2   EFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 61
           E   +  + +   N N      V +WA+ +GV+  +F SS+ +Y  AD  P  E +  KP
Sbjct: 74  EVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKP 133
Query: 62  --------DAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP-- 111
                    AG V    Y         + R   ++G           +D I++ R  P  
Sbjct: 134 ISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGV---IYDFIMKLRRNPNV 190
Query: 112 --IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI--FNLVSDRAVTLDGMAKLCAQA 167
             + G G Q  +  +VRD       A +  E   +     N+ +  AV +  +A++ A+ 
Sbjct: 191 LEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEV 250
Query: 168 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
            GL  EI        G    + +P    +          + GWR T    E +K+  E+ 
Sbjct: 251 LGLRPEIRLVPSTPDG----RGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDL 306
Query: 228 VK 229
            K
Sbjct: 307 AK 308

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-18
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-15
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	4e-13
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	4e-12
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	4e-12
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	8e-12
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-10
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-10
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-10
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-10
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	3e-10
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	7e-10
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	2e-09
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-09
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	7e-09
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	8e-09
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-08
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-08
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-08
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	6e-08
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-07
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-07
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-06
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-06
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-06
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	7e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	8e-06
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	5e-05
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-04
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-04

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 81.8 bits (203), Expect = 2e-18
 Identities = 36/229 (15%), Positives = 71/229 (31%), Gaps = 52/229 (22%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFS--- 77
           + D    + +   ++ S+   Y      P  E ++  PD        V K   E+     
Sbjct: 92  LYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYG----VSKLACEHIGNIY 147

Query: 78  ------NWASFR----------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ--- 118
                    + R            YMI           FF +      + +  + +    
Sbjct: 148 SRKKGLCIKNLRFAHLYGFNEKNNYMINR---------FFRQAFHGEQLTLHANSVAKRE 198

Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
           F    + +D +  +  A++  +   S  FN+ S  A+T   +A     A G    ++  +
Sbjct: 199 FL---YAKDAAKSVIYALKQEKV--SGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKN 253

Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
           P A                Y +   AK++L + +  N    ++E     
Sbjct: 254 PNANEGI---------HSSYMDSSKAKELLDFSTDYNFATAVEEIHLLM 293

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 73.0 bits (180), Expect = 3e-15
 Identities = 47/229 (20%), Positives = 81/229 (35%), Gaps = 39/229 (17%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFS-- 77
           V +WA+ +GV+  +F SS+ +Y  AD  P  E +  KP     A     E   +  ++  
Sbjct: 96  VLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCA-TYARL 154

Query: 78  ---NWASFR--------PQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQ---FTNI 122
                 + R         ++ +           F  ++ R    + + G G Q   +   
Sbjct: 155 FGVRCLAVRYANVVGPRLRHGVIYD--------FIMKLRRNPNVLEVLGDGTQRKSYL-- 204

Query: 123 AHVRDLSSMLTLAVENPEA--ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
            +VRD       A +  E   A     N+ +  AV +  +A++ A+  GL  EI    P 
Sbjct: 205 -YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIR-LVPS 262

Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                          +          + GWR T    E +K+  E+  K
Sbjct: 263 TPDGRGWPGDV---KYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAK 308

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 66.3 bits (162), Expect = 4e-13
 Identities = 20/155 (12%), Positives = 49/155 (31%), Gaps = 15/155 (9%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFS 77
           R      + + ++   F+SS G+Y    E    E              ++ E  ++    
Sbjct: 90  RNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA--Y 147

Query: 78  NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE 137
           +    R   + G G           +       P       +TN  H  D ++ +   ++
Sbjct: 148 SSTILRFSGIYGPGRL-----RMIRQAQTPEQWPARN---AWTNRIHRDDGAAFIAYLIQ 199

Query: 138 NPEAASSN-IFNLVSDRAVTLDGMAKLCAQAAGLP 171
               A    ++ +  ++ + +  + +  A   G+ 
Sbjct: 200 QRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIA 234

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 38/229 (16%), Positives = 76/229 (33%), Gaps = 46/229 (20%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRP 84
           A+ + V+ F + +S+  Y      P VE  + KP    A    V KY++E +++   F  
Sbjct: 140 ARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA----VTKYVNELYAD--VFSR 193

Query: 85  QYMI-----------GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQ---FTNIAHV 125
            Y             G   + +         +   +++   V I G G     F    ++
Sbjct: 194 CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC---YI 250

Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK-----LCAQAAGLPVEIVHYDPK 180
            +      LA      A + ++N+      +L+ +       L         E V+ D +
Sbjct: 251 ENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFR 310

Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
              +           H  A+   A  +LG+    ++   +      Y+ 
Sbjct: 311 EGDVR----------HSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 36/240 (15%), Positives = 68/240 (28%), Gaps = 46/240 (19%)

Query: 24  VADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISENFS----- 77
           V   AK + V +F++  +A  Y     + P        P      + K  +E++      
Sbjct: 120 VVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL 179

Query: 78  NWASFRP-------QY--MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FTNIAHV 125
           ++ +FR             +           FF R+   +   +         F     V
Sbjct: 180 DFVTFRLANVVGPRNVSGPLPI---------FFQRLSEGKKCFV---TKARRDFV---FV 224

Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGI 184
           +DL+     AV+         ++  S   V +  +     +A  LP              
Sbjct: 225 KDLARATVRAVDG---VGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPD- 280

Query: 185 DAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDK 244
           DA             +P       G    T L E +      + + G        +I++ 
Sbjct: 281 DAP--------SILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSGGYTHLKINEN 332

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 62.9 bits (154), Expect = 8e-12
 Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 29/220 (13%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFS-- 77
           + +  + +GV + +F S++ +Y  A   P  E     P     A  +  E  I  ++   
Sbjct: 97  LLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIE-SYCHT 155

Query: 78  ---NWASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQ---FTNIAHVRDLSS 130
                  +R   +IG  +       F  ++ R    + I G+G Q   +    ++ D   
Sbjct: 156 FDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYI---YISDCVD 212

Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGI-DAKKA 189
            +   +   E    NIFN+ S+  + +  +A++  +  GL               D    
Sbjct: 213 AMLFGLRGDER--VNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVP-- 268

Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                          K  LGW+   N  E ++    + V+
Sbjct: 269 ------VMLLSIEKLKR-LGWKPRYNSEEAVRMAVRDLVE 301

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 14/176 (7%)

Query: 21  QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 80
           Q  +    K  G  +  F S  G     D    VE      +    +V + I      + 
Sbjct: 93  QVNIIKAIKEVGTVKRFFPSEFGN--DVDNVHAVEPAKSVFEV-KAKVRRAIEAEGIPYT 149

Query: 81  SFRP----QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
                    Y + S                +  V I G G          D+ +    AV
Sbjct: 150 YVSSNCFAGYFLRSL------AQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAV 203

Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPF 192
           ++P   +  ++  +    ++L+ +  L  +     +E   Y P+   +      PF
Sbjct: 204 DDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA-YVPEEEVLKLIADTPF 258

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 16/128 (12%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISE 74
             + D  K +GV +FL +  AG    A     ++   V  +        G   +   + E
Sbjct: 93  LTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKE 152

Query: 75  NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
              +W  F P   +  G             + K  + +   G        V D ++ +  
Sbjct: 153 KEIDWVFFSPAADMRPG------VRTGRYRLGKDDMIVDIVGNSHI---SVEDYAAAMID 203

Query: 135 AVENPEAA 142
            +E+P+  
Sbjct: 204 ELEHPKHH 211

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 39/239 (16%), Positives = 72/239 (30%), Gaps = 43/239 (17%)

Query: 14  TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGH 65
            +NN++  + +  +     +  FL+ SSA  Y           +  KP            
Sbjct: 90  MDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFD 148

Query: 66  VQVEKYISENFSNWASFRP-------QYMIGSGNN---KDCEEWFFDRIVR-KRPVPIPG 114
             V + + E  S    FR        +   GS  +            ++   + P    G
Sbjct: 149 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFH-----LNTQLNNGESPKLFEG 203

Query: 115 SGMQ---FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG-L 170
           S      F    +V D++ +    +EN     S IFNL + RA +   +A          
Sbjct: 204 SENFKRDFV---YVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG 257

Query: 171 PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
            +E + +  K  G               A+    +     +    + E + E      +
Sbjct: 258 QIEYIPFPDKLKGRYQA--------FTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNR 308

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 37/249 (14%), Positives = 81/249 (32%), Gaps = 58/249 (23%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKY 71
             N++    + + A+S   K  ++ SSAG+Y    + P+V G    P+          K 
Sbjct: 113 KTNYQAFLNLLEIARSKKAK-VIYASSAGVYG-NTKAPNVVGKNESPENVYG----FSKL 166

Query: 72  ISENF-------SNWASFR------P-QY-------MIGSGNNKDCEEWFFDRIVRKRPV 110
             + F       +     R      P ++       M+                +  + V
Sbjct: 167 CMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQ---------LALGAMAFKEV 217

Query: 111 PIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 167
            +   G Q   F    ++ D+      A++  +   S ++N+   +A + + +  +  + 
Sbjct: 218 KLFEFGEQLRDFV---YIEDVIQANVKAMKAQK---SGVYNVGYSQARSYNEIVSILKEH 271

Query: 168 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
            G   ++ +     A    K        H  A        L +    +L   +K+     
Sbjct: 272 LGDF-KVTYIKNPYAF-FQK--------HTQAHIEPTILDLDYTPLYDLESGIKDYLPHI 321

Query: 228 VKIGRDKKA 236
             I + ++A
Sbjct: 322 HAIFKGQRA 330

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 45/228 (19%), Positives = 85/228 (37%), Gaps = 44/228 (19%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRP 84
           AK++ V+ F + +S+  Y      P VE ++  P    A    V KY++E ++    +  
Sbjct: 138 AKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYA----VTKYVNEIYAQ--VYAR 191

Query: 85  QYMI-----------GSGNNKDCEEW-----FFDRIVRKRPVPIPGSGMQ---FTNIAHV 125
            Y             G   + +         +   +++   V I G G     F    ++
Sbjct: 192 TYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC---YI 248

Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEI----VHYDPKA 181
            ++  M  L+    ++A  NI+N+      TL+ ++        L   I    + Y    
Sbjct: 249 DNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFR 308

Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
           +G D +        H  A+   A D+L +R    + E L+     YV+
Sbjct: 309 SG-DVR--------HSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVR 347

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 36/242 (14%), Positives = 69/242 (28%), Gaps = 49/242 (20%)

Query: 14  TNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGH 65
            +NN++  + +  +     +  FL+ SSA  Y           +  KP            
Sbjct: 137 MDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFD 195

Query: 66  VQVEKYISENFSNWASFRP-------QY-------MIGSGNNKDCEEWFFDRIVR-KRPV 110
             V + + E  S    FR        +        +               ++   + P 
Sbjct: 196 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFH---------LNTQLNNGESPK 246

Query: 111 PIPGSGMQ---FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA 167
              GS      F    +V D++ +    +EN     S IFNL + RA +   +A      
Sbjct: 247 LFEGSENFKRDFV---YVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAY 300

Query: 168 AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
                  + Y P    +  +           A+    +     +    + E + E     
Sbjct: 301 HKKGQ--IEYIPFPDKLKGRYQA-----FTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 353

Query: 228 VK 229
            +
Sbjct: 354 NR 355

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 40/226 (17%)

Query: 18  FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 77
            +  + +AD A+  G+   ++     I K             K      +VE+Y  +   
Sbjct: 92  VKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGK-----GEVEEYFRDIGV 146

Query: 78  NWASFRP-QYMIGSGNNKDCEEWFFDRIVRKR---------PVPIPGSGMQFTNIAHVRD 127
              S R   Y           E      + ++          +P     M    ++ V D
Sbjct: 147 PMTSVRLPCYF----------ENLLSHFLPQKAPDGKSYLLSLPTGDVPMDG--MS-VSD 193

Query: 128 LSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
           L  ++   ++ PE        L +    T +  A L  +     V      P+      K
Sbjct: 194 LGPVVLSLLKMPEKYVGQNIGLSTC-RHTAEEYAALLTKHTRKVVHDAKMTPEDY---EK 249

Query: 188 KAFP----FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
             FP      NM  +   R  +DI        L        +++++
Sbjct: 250 LGFPGARDLANMFRFYALRPDRDIELTLR---LNPKAL-TLDQWLE 291

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 27/222 (12%), Positives = 65/222 (29%), Gaps = 25/222 (11%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD--------AGHVQVEKYISE 74
           + + AK   V++ +  S+ G++ P   +       + +P         A  +  + Y  +
Sbjct: 95  ILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK 154

Query: 75  NFSNWASFRPQYMIGSGNNKDCE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLS 129
              +  S R   +I                 F   V++       +  +   + ++ D  
Sbjct: 155 FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDAL 214

Query: 130 SMLTLAVENPEAA--SSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAK 187
             L    E         N +N V+    T   +     +   +P   + Y          
Sbjct: 215 KALVDLYEADRDKLVLRNGYN-VTAYTFTPSELYSKIKER--IPEFEIEYKEDFRD-KIA 270

Query: 188 KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
             +P        +   A +  G+    +L   + +  +   +
Sbjct: 271 ATWPES-----LDSSEASNEWGFSIEYDLDRTIDDMIDHISE 307

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 32/238 (13%), Positives = 62/238 (26%), Gaps = 38/238 (15%)

Query: 24  VADWAKSSGVKQFLFISSAGIY------KPADE-PPHVEGDVVKPD------AGHVQVEK 70
                  + V + L++ SA          P  E   +      K        A   Q  +
Sbjct: 109 FYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQARE 168

Query: 71  YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
                        P  ++G  +           I                N+    +   
Sbjct: 169 QARNGL-PVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQR---NVIDAAEAGR 224

Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV--------------- 175
            L +A+E         + L++   + +  + +  A+  G P                   
Sbjct: 225 GLLMALERGRI--GERY-LLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRL 281

Query: 176 --HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG 231
                 +   +D           F  + R A++ LG+ STT L + L    + +   G
Sbjct: 282 RYRVSGQLPLLDETAIEVMAGGQFL-DGRKAREELGFFSTTALDDTLLRAIDWFRDNG 338

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 54.1 bits (130), Expect = 8e-09
 Identities = 26/149 (17%), Positives = 56/149 (37%), Gaps = 14/149 (9%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS-----F 82
           A+++  +   ++S+  +Y   D     E   + P A   +      + +    +     F
Sbjct: 90  ARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVF 149

Query: 83  RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
           R   + G G         F ++ +     I     Q  +  HV D++ +L  ++  P+  
Sbjct: 150 RLAGIYGPGRG------PFSKLGKGGIRRIIK-PGQVFSRIHVEDIAQVLAASMARPDPG 202

Query: 143 SSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
           +  ++N+  D  V    +    A+  GLP
Sbjct: 203 A--VYNVCDDEPVPPQDVIAYAAELQGLP 229

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 26/227 (11%), Positives = 71/227 (31%), Gaps = 49/227 (21%)

Query: 29  KSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQ----VEKYISE--------- 74
               +K+ ++ ++     +   +      +       +      + K   E         
Sbjct: 139 HFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQ 198

Query: 75  --------NFSNWASFRPQYMIGSGNNKDCEEW--------FFDRIVRKRPVPIPGSGMQ 118
                    F N   + P  ++G+G  +             F  + ++  P+P+   G+ 
Sbjct: 199 HQLPTVRARFQN--VYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVA 256

Query: 119 ---FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV 175
              F     V D+++ L       +     ++N+ S +  ++  +A    +  G   E+ 
Sbjct: 257 TRDFI---FVEDVANGLIACAA--DGTPGGVYNIASGKETSIADLATKINEITGNNTELD 311

Query: 176 HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
               +                 +  P  A+  LG+ +  ++ + L++
Sbjct: 312 RLPKRPWDNSG---------KRFGSPEKARRELGFSADVSIDDGLRK 349

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 22/222 (9%), Positives = 66/222 (29%), Gaps = 20/222 (9%)

Query: 21  QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 80
           Q  + +  K +G  +    S  G+    D   H             +V + I      + 
Sbjct: 96  QLKLVEAIKEAGNIKRFLPSEFGM--DPDIMEHALQPGSITFIDKRKVRRAIEAASIPYT 153

Query: 81  SFRP----QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
                    Y  GS       +     +  +  V I G G          D+ +    ++
Sbjct: 154 YVSSNMFAGYFAGSLA-----QLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSI 208

Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNM 195
           ++P+  +  ++       ++   + ++  + +   ++ ++   +    D K   +  + +
Sbjct: 209 DDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIV 268

Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERF--------EEYVK 229
             +      +  L          +  + +        + Y++
Sbjct: 269 RCHLYQIFFRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLE 310

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 27/222 (12%), Positives = 62/222 (27%), Gaps = 22/222 (9%)

Query: 21  QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 80
           Q  +    K +G  +  F S  G+     +       V +       + + I      + 
Sbjct: 92  QVKIIKAIKEAGNVKKFFPSEFGLD---VDRHDAVEPVRQVFEEKASIRRVIEAEGVPYT 148

Query: 81  SFRP----QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV 136
                    Y + +                +  V I G G          D+ +    A 
Sbjct: 149 YLCCHAFTGYFLRNL------AQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA 202

Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKA-FPFRNM 195
            +P   +  +   +    +T + +  L  +  G  +E  +   +    D +++ FP   +
Sbjct: 203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYL 262

Query: 196 HFYAEPRAAKDILGWRSTTNLPEDLKERF--------EEYVK 229
                 +  K    +        +  E +        +EY+ 
Sbjct: 263 LALYHSQQIKGDAVYEIDPAKDIEASEAYPDVTYTTADEYLN 304

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 35/223 (15%), Positives = 71/223 (31%), Gaps = 59/223 (26%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYISENFSN--WAS 81
             S GV + +  S+  +Y  AD  P  E   + P     A      K   E  +     +
Sbjct: 106 CTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAAS-----KVGLEMVAGAHQRA 160

Query: 82  F------------------RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ---FT 120
                              RP  ++               ++ +  +P+ G G Q   FT
Sbjct: 161 SVAPEVGIVRFFNVYGPGERPDALVPR---------LCANLLTRNELPVEGDGEQRRDFT 211

Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
              ++ D+   L      P     ++ N  S ++++++ + ++    +    E+    P+
Sbjct: 212 ---YITDVVDKLVALANRPL---PSVVNFGSGQSLSVNDVIRILQATSP-AAEVARKQPR 264

Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS-TTNLPEDLKE 222
              I            F A+       +G RS    + E ++ 
Sbjct: 265 PNEI----------TEFRADTALQTRQIGERSGGIGIEEGIRL 297

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 13/148 (8%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
             D AK +GVK  + + S G   P D P +  G+         + E+Y++++ + +   R
Sbjct: 116 QIDAAKVAGVKHIVVVGSMGGTNP-DHPLNKLGNGNILVW-KRKAEQYLADSGTPYTIIR 173

Query: 84  PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 143
              ++               ++  +   +  +  +        D++ +   A+   EA +
Sbjct: 174 AGGLLDKEGG-------VRELLVGKDDELLQTDTKT---VPRADVAEVCIQALLFEEAKN 223

Query: 144 SNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
              F+L S    T        A  + + 
Sbjct: 224 K-AFDLGSKPEGTSTPTKDFKALFSQVT 250

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 28/167 (16%), Positives = 51/167 (30%), Gaps = 27/167 (16%)

Query: 21  QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA 80
              V   A+ +GVK   +   A     A+E       V      H+  E  I      + 
Sbjct: 87  HANVVKAARDAGVKHIAYTGYAF----AEESIIPLAHV------HLATEYAIRTTNIPYT 136

Query: 81  SFRP-QYMIGSGNNKDCE---EWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLA 135
             R   Y          +               +    GSG+   N     +L+      
Sbjct: 137 FLRNALYT---------DFFVNEGLRASTESGAIVTNAGSGI--VNSVTRNELALAAATV 185

Query: 136 VENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
           +      +   +NLVS++  T D +A++ ++ +G  V       +  
Sbjct: 186 LTEEGHEN-KTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEE 231

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 43/222 (19%), Positives = 77/222 (34%), Gaps = 42/222 (18%)

Query: 24  VADWAKSSGVKQFLFISSAG-IY-KPADEPPHVEGDVVKPD----AGHVQVEKYISENFS 77
           + +  +  GV++ +F S+ G IY +  +     E    +P     A     E Y+   + 
Sbjct: 100 LLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL-SVYG 158

Query: 78  -----NWASFRPQYMIGSGNNKDCEE----WFFDRIVRKRPVPI-----PGSGMQ---FT 120
                 W S R   + G   +   E      F +R+++  PV +     PG       + 
Sbjct: 159 QSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV 218

Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
              +V D++    LA+     +   I+N+ +    T   +    A+AAG   E+    P 
Sbjct: 219 ---YVGDVAEAHALALF----SLEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQ-PAPP 270

Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
             G D +             P       GWR      E ++ 
Sbjct: 271 RPG-DLE--------RSVLSPLKLMA-HGWRPKVGFQEGIRL 302

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 17/133 (12%)

Query: 17  NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISE- 74
           +       A+ AK+ G K F  +SS G  K ++     V+G          +VE  + E 
Sbjct: 108 DRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKG----------EVEAKVEEL 157

Query: 75  NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
            F  ++ FRP  ++         EW   +        +P S     ++  V  +   +  
Sbjct: 158 KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFG----SLPDSWASGHSV-PVVTVVRAMLN 212

Query: 135 AVENPEAASSNIF 147
            V  P      + 
Sbjct: 213 NVVRPRDKQMELL 225

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 31/209 (14%), Positives = 63/209 (30%), Gaps = 37/209 (17%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNW 79
           VA  A  +GVK+ L   +A  Y      P        P           E ++  +    
Sbjct: 119 VAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMSDVPV 178

Query: 80  ASFR------PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI---AHVRDLSS 130
            S R      P+  IG          F+ R+   +             +     + D  +
Sbjct: 179 VSLRLANVTGPRLAIGPIPT------FYKRLKAGQKCFC------SDTVRDFLDMSDFLA 226

Query: 131 MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV-EIVHYDPKAAGIDAKKA 189
           +  L+++      + +FN+ +    ++  +  +     G  + E V      A  D    
Sbjct: 227 IADLSLQEGRP--TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGAD-DV--- 280

Query: 190 FPFRNMHFYAEPRAAKDILGWRSTTNLPE 218
                     +P   +   GW++  +  +
Sbjct: 281 -----PSVVLDPSKTETEFGWKAKVDFKD 304

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 16/135 (11%)

Query: 100 FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-EAASSNIFNLVSDRAVTLD 158
           F  +     P+ + G G Q      +RD    + +A+ NP +A    +FN  +++    +
Sbjct: 253 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE 312

Query: 159 GMAKLCAQAA---GLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT 214
            +A L  +A    GL V+ +   +P+    +          ++ A+     + LG     
Sbjct: 313 -LASLVTKAGSKLGLDVKKMTVPNPRVEAEEH---------YYNAKHTKLME-LGLEPHY 361

Query: 215 NLPEDLKERFEEYVK 229
                L       V+
Sbjct: 362 LSDSLLDSLLNFAVQ 376

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 17/115 (14%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 87
            K+ GV + +  +SA +     + P     V      H+++ K + E+   + +  P   
Sbjct: 98  MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTD---DHIRMHKVLRESGLKYVAVMPP-- 152

Query: 88  IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA 142
                         D+        +   G   + +    DL   +   +   E  
Sbjct: 153 -----------HIGDQ-PLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD 195

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 22/163 (13%)

Query: 22  RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWAS 81
           R V + AK++GVK   + S       AD  P      +     H++ EK ++++   +  
Sbjct: 85  RNVINAAKAAGVKFIAYTSLLH----ADTSP------LGLADEHIETEKMLADSGIVYTL 134

Query: 82  FRP-QYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENP 139
            R   Y        +         +         G G      A   D ++     +   
Sbjct: 135 LRNGWYS-------ENYLASAPAALEHGVFIGAAGDGK--IASATRADYAAAAARVISEA 185

Query: 140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
                 ++ L  D A TL  +A    + +G  V   +      
Sbjct: 186 GHEGK-VYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADF 227

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 19  RLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN 78
                +   AK SGV   +FI         + P H+               + +S +  +
Sbjct: 84  PEVENLVYAAKQSGVAHIIFIGYYAD--QHNNPFHMSPY-------FGYASRLLSTSGID 134

Query: 79  WASFRP-QYMIGSGNNKDCEEWFFDRIVRKRPVPIP-GSGMQFTNIAHVRDLSSMLTLAV 136
           +   R   YM       D  + +   ++    +  P G G    N     D++  +   +
Sbjct: 135 YTYVRMAMYM-------DPLKPYLPELMNMHKLIYPAGDGR--INYITRNDIARGVIAII 185

Query: 137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAA 182
           +NP+      + L    +  +  +A + ++A+G  ++      +  
Sbjct: 186 KNPDTWGK-RYLLSGY-SYDMKELAAILSEASGTEIKYEPVSLETF 229

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 49/223 (21%)

Query: 28  AKSSGVKQFLFISSAGIY-----KPADEPPHVEGDV--VKPDAGHVQVEKYISENFSNWA 80
           A+ +G+K+F + SSA IY              E D    +P      +EK  +E      
Sbjct: 132 ARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF-GLEKLATEEL--CK 188

Query: 81  SFRPQYMIGS------------GNNKDCEEWFFDRIVRK-----RPVPIPGSGMQFTNIA 123
            +   + I              G  K   E       RK         + G G+Q  +  
Sbjct: 189 HYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT 248

Query: 124 HVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHY----DP 179
            + +    +    ++         N+ SD  V+++ MA++        + I H       
Sbjct: 249 FIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGV 305

Query: 180 KAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
           +    D                   K+ LGW     L E L+ 
Sbjct: 306 RGRNSDNNL---------------IKEKLGWAPNMRLKEGLRI 333

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 42.0 bits (98), Expect = 1e-04
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 16/158 (10%)

Query: 30  SSGVKQFLFISSAGIYKPADEPPHVEGD-VVKPDAGHVQVEKYISENFS-----NWASFR 83
            +G K ++    +     + +PP+ E    +K    +  +E  + E         W+  R
Sbjct: 118 QTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHR 177

Query: 84  PQYMIG----SGNNKDCEEWFFDRIVRK--RPVPIPGSGMQFTNIAHVRD---LSSMLTL 134
           P  + G    S  N       +  I +   + +   G    +   +   D   ++     
Sbjct: 178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIW 237

Query: 135 AVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
           A  +P A +   FN+ +          K+ A+  G+  
Sbjct: 238 AAVDPYAKNE-AFNVSNGDVFKWKHFWKVLAEQFGVEC 274

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 15/124 (12%), Positives = 31/124 (25%), Gaps = 18/124 (14%)

Query: 28  AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA---------GHVQVEKYISENFSN 78
              +   + L +  A   +  ++   +       +A                   +   +
Sbjct: 90  LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFS 149

Query: 79  WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN 138
           W    P  M   G      E   D  + K  +     G  F     + D +  +   +E 
Sbjct: 150 WTYISPSAMFEPG------ERTGDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIER 200

Query: 139 PEAA 142
           P   
Sbjct: 201 PNHL 204

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 16/128 (12%), Positives = 40/128 (31%), Gaps = 19/128 (14%)

Query: 24  VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 83
               A+  G+K+F+ +SS G      +P     ++          +  +  +  ++   R
Sbjct: 114 TIQEAEKRGIKRFIMVSSVG----TVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVR 169

Query: 84  PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS 143
           P    G            +       V +     + T      D++ ++   V+      
Sbjct: 170 P----G---------PLSNEE-STGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIG 215

Query: 144 SNIFNLVS 151
              F +++
Sbjct: 216 K-TFEVLN 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.97
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.97
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.97
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.97
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.97
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.96
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.96
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.96
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.96
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.96
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.96
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.96
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.96
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.96
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.96
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.96
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.95
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.95
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.95
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.95
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.95
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.95
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.94
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.94
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.94
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.93
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.92
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.91
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.88
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.87
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.85
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.84
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.8
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.75
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.75
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.71
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.7
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.68
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.67
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.62
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.62
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.6
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.58
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.56
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.55
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.53
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.51
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.5
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.5
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.5
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.49
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.49
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.46
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.28
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.21
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.2
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.05
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.97
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.92
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.83
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.82
1spx_A	278	Short-chain reductase family member (5L265); paral	98.7
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.68
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.65
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.64
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.61
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.59
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.58
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.57
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.55
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.55
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.54
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.54
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.53
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.51
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.5
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.49
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.48
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.46
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.43
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.43
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.4
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.39
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.39
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.39
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.39
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.38
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.37
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.36
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.36
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.36
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.35
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.35
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.35
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.35
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.33
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.33
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.32
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.32
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.32
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.32
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.32
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.32
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.29
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.29
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.28
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.28
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.27
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.25
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.25
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.24
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.24
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.23
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.23
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.23
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.22
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.22
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.22
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.21
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.21
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.21
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.19
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.19
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.19
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.19
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.18
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.18
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.18
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.16
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.16
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.15
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.15
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.15
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.14
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.13
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.13
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.13
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.12
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.12
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.12
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.11
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.11
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.11
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.1
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.1
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.09
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.07
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.07
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.06
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.06
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.05
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.05
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.05
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.05
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.05
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.04
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.04
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.03
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.03
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.02
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.01
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.01
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.01
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.99
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.99
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.98
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.98
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.97
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.96
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.96
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.96
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.94
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.94
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.93
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.93
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.93
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.93
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.91
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.89
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.89
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.87
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.86
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.86
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.84
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.82
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.81
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.81
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.8
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.8
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.8
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.79
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.79
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.78
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.78
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.72
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.69
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.69
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.68
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.68
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.67
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.63
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.63
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.63
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.61
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.6
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.55
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.54
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.52
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	97.51
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.49
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.47
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.46
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.46
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.45
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.4
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.35
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.34
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.23
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.22
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.2
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.18
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.18
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	97.16
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.13
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.06
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.06
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.04
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.02
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.01
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.9
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.85
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.83
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.76
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.68
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.45
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.44
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.42
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.35
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	96.27
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.26
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.21
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.16
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.16
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.14
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.13
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.13
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.06
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.93
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.87
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	95.77
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.49
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	95.21
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	94.77
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	93.83
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	93.02
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	89.58
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	87.56

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=8.9e-34  Score=234.31  Aligned_cols=206  Identities=14%  Similarity=0.107  Sum_probs=172.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC----CCCCCCChhHHHHHHHh---------hCCceEEEe
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISE---------NFSNWASFR   83 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~----~~~~~~~~y~~ek~~~e---------~~~~~~ilR   83 (255)
                      |+.++.+++++|++.+++||||+||.++|+.....+++|++    +..|....|+.+|+..|         .+++++++|
T Consensus        89 nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR  168 (319)
T 4b8w_A           89 NVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI  168 (319)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEe
Confidence            38999999999999999999999999999988778899987    44443234776665544         489999999


Q ss_pred             cCcccCCCCCC-----CcHHHHHHH----HHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           84 PQYMIGSGNNK-----DCEEWFFDR----IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        84 p~~v~G~~~~~-----~~~~~~~~~----~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      |++||||+...     ..++.++..    +..|.++.+++++.+.++|+|++|+|++++.+++++....+++||+++++.
T Consensus       169 p~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~  248 (319)
T 4b8w_A          169 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDE  248 (319)
T ss_dssp             ECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGC
T ss_pred             eccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCc
Confidence            99999998753     256666776    778888888999999999999999999999999876544357999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhcc
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~  232 (255)
                      +|+.|+++.+.+.+|.+.++...+......          ....+|++|++++|||.|.++++++|+++++|++++..
T Consensus       249 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~----------~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~  316 (319)
T 4b8w_A          249 VSIKEAAEAVVEAMDFHGEVTFDTTKSDGQ----------FKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYE  316 (319)
T ss_dssp             EEHHHHHHHHHHHTTCCSCEEEETTSCCCC----------SCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSCS
T ss_pred             eeHHHHHHHHHHHhCCCCcEEeCCCCCcCc----------ccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999988877665543221          45679999999999999999999999999999998754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.4e-33  Score=230.80  Aligned_cols=208  Identities=17%  Similarity=0.179  Sum_probs=173.6

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.+++||||+||.++|+.....+++|+++..|. +.|+.+|+..|         .+++++++||+.|
T Consensus        85 n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v  163 (311)
T 3m2p_A           85 NEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPD-LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHL  163 (311)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS-SHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHHcCCCEEEEeeCce
Confidence            3899999999999999999999999999998777789999887764 67776665443         3899999999999


Q ss_pred             cCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           88 IGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        88 ~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      ||++... ..+..++..+..|.++.+++++++.++|+|++|+|++++.+++++..  +++||+++++.+|+.|+++.+++
T Consensus       164 ~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~  241 (311)
T 3m2p_A          164 YGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV--SGTFNIGSGDALTNYEVANTINN  241 (311)
T ss_dssp             ECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC--CEEEEECCSCEECHHHHHHHHHH
T ss_pred             eCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC--CCeEEeCCCCcccHHHHHHHHHH
Confidence            9998765 46778888999999988889999999999999999999999998763  69999999999999999999999


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhcccccc
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKKA  236 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~~~  236 (255)
                      .+|.+.++...+.....         ......+|++|++++|||+|.++++++|+++++|+++.+....+
T Consensus       242 ~~g~~~~~~~~~~~~~~---------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~~~  302 (311)
T 3m2p_A          242 AFGNKDNLLVKNPNANE---------GIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVPLW  302 (311)
T ss_dssp             HTTCTTCEEECSSSBCC---------SCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC-------
T ss_pred             HhCCCCcceecCCCCCC---------CcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccCcce
Confidence            99998887766552111         22677899999999999999999999999999999887755443

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-33  Score=229.55  Aligned_cols=215  Identities=18%  Similarity=0.221  Sum_probs=173.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hC
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NF   76 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~   76 (255)
                      ..++..++.|  +.++.+++++|++.++++|||+||.++||.....+.+|+.+..+. +.|+.+|...|         ++
T Consensus        81 ~~~~~~~~~n--v~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~g  157 (313)
T 3ehe_A           81 ENPDEIYRNN--VLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI-SLYGASKLACEALIESYCHTFD  157 (313)
T ss_dssp             CCHHHHHHHH--HHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hCHHHHHHHH--HHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHhcC
Confidence            3344455556  999999999999999999999999999998877888888877654 67777775544         38


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcC-CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCcc
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  155 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~  155 (255)
                      ++++++||++|||++.....+..++..+..+ .++.+++++.+.++|+|++|+|++++.+++....  +++||+++++.+
T Consensus       158 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~ni~~~~~~  235 (313)
T 3ehe_A          158 MQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDER--VNIFNIGSEDQI  235 (313)
T ss_dssp             CEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSS--EEEEECCCSCCE
T ss_pred             CCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCC--CceEEECCCCCe
Confidence            9999999999999988777777888888777 5567889999999999999999999999994433  589999999999


Q ss_pred             CHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhccc
Q 025270          156 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  233 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~  233 (255)
                      |++|+++.+++.+|.+.++...+.....       +.......+|++|++ .|||+|.++++++|+++++|++++...
T Consensus       236 s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~d~~k~~-~lG~~p~~~~~e~l~~~~~~~~~~~~~  305 (313)
T 3ehe_A          236 KVKRIAEIVCEELGLSPRFRFTGGDRGW-------KGDVPVMLLSIEKLK-RLGWKPRYNSEEAVRMAVRDLVEDLDE  305 (313)
T ss_dssp             EHHHHHHHHHHHTTCCCEEEEC-------------------CCBCCHHHH-HHTCCCSCCHHHHHHHHHHHHHHHHHC
T ss_pred             eHHHHHHHHHHHhCCCCceEECCCccCC-------ccccceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhCccc
Confidence            9999999999999998776554321110       111245678999996 599999999999999999999997654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-32  Score=230.95  Aligned_cols=207  Identities=13%  Similarity=0.180  Sum_probs=173.1

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCCCCCCCCCChhHHHHHHHh---------hCCce
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNW   79 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~   79 (255)
                      ..++.|  +.++.+++++|++.+++||||+||.++|+.. ...+++|+++..|. +.|+.+|+..|         .++++
T Consensus       120 ~~~~~n--v~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~  196 (346)
T 4egb_A          120 PFYDTN--VIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN-SPYSSSKASADMIALAYYKTYQLPV  196 (346)
T ss_dssp             HHHHHH--THHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred             HHHHHH--HHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHhCCCE
Confidence            334445  8999999999999999999999999999976 45688999888764 67776665544         38999


Q ss_pred             EEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHH
Q 025270           80 ASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  158 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~  158 (255)
                      +++||+.|||++.... .++.++..+..+.++.+++++.+.++|||++|+|++++.+++++..  |++||+++++.+|+.
T Consensus       197 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~~s~~  274 (346)
T 4egb_A          197 IVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV--GEVYNIGGNNEKTNV  274 (346)
T ss_dssp             EEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT--TCEEEECCSCCEEHH
T ss_pred             EEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC--CCEEEECCCCceeHH
Confidence            9999999999987553 6778888999999888889999999999999999999999998763  689999999999999


Q ss_pred             HHHHHHHHHhCCCCeee-ecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          159 GMAKLCAQAAGLPVEIV-HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       159 el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      |+++.+.+.+|.+.+.. ..+....          ......+|++|+++.|||+|.++++++|+++++||+++.
T Consensus       275 e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  338 (346)
T 4egb_A          275 EVVEQIITLLGKTKKDIEYVTDRLG----------HDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNE  338 (346)
T ss_dssp             HHHHHHHHHHTCCGGGCEEECC--C----------CCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHhCCCcccccccCCCCC----------CcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhh
Confidence            99999999999876532 2222211          124567899999999999999999999999999998865

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=8.5e-33  Score=232.01  Aligned_cols=209  Identities=20%  Similarity=0.222  Sum_probs=170.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.+++||||+||.++|+.....+++|+++..|. +.|+.+|+..|         .+++++++||++|
T Consensus       127 nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v  205 (351)
T 3ruf_A          127 NITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPL-SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNV  205 (351)
T ss_dssp             HTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCC-ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCce
Confidence            4899999999999999999999999999998877889999887764 67776665544         3899999999999


Q ss_pred             cCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHH
Q 025270           88 IGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK  162 (255)
Q Consensus        88 ~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~  162 (255)
                      ||++...     .+++.++..+..+.++.+++++.+.++|||++|+|++++.++..+....+++||+++++.+|+.|+++
T Consensus       206 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  285 (351)
T 3ruf_A          206 FGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSG  285 (351)
T ss_dssp             ESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHH
T ss_pred             eCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHH
Confidence            9998654     35678888999999888889999999999999999999999988433336899999999999999999


Q ss_pred             HHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          163 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       163 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+++.+|.+..+...+....     ...+.......+|++|++++|||.|.++++++|+++++||+++.
T Consensus       286 ~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  349 (351)
T 3ruf_A          286 YIYDELNLIHHIDKLSIKYR-----EFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFL  349 (351)
T ss_dssp             HHHHHHHTTCCC-----EEE-----CCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhCccccccccccccc-----CCCCCccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            99999998433322211110     01111235678999999999999999999999999999998763

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=8.7e-33  Score=228.29  Aligned_cols=217  Identities=23%  Similarity=0.246  Sum_probs=172.3

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCc
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSN   78 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~   78 (255)
                      ++..++.|  +.++.+++++|++.++++|||+||.++|+.....+++|+.+..|. +.|+.+|...|         .+++
T Consensus        82 ~~~~~~~n--~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~g~~  158 (312)
T 3ko8_A           82 PIVHFNEN--VVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPI-SVYGAAKAAGEVMCATYARLFGVR  158 (312)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHhCCC
Confidence            33344455  999999999999999999999999999998877889998887664 77877776544         3899


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcC-CCeeccCCCCcceeeeeHHHHHHHHHHHhcC---CCcCCCCEEEecCCCc
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN---PEAASSNIFNLVSDRA  154 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~~~~i~~~~~  154 (255)
                      ++++||++||||+.....+..++..+..+ ..+.+++++.+.++|+|++|+|++++.++++   .... +++||+++++.
T Consensus       159 ~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~-~~~~ni~~~~~  237 (312)
T 3ko8_A          159 CLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP-FLALNVGNVDA  237 (312)
T ss_dssp             EEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS-EEEEEESCSSC
T ss_pred             EEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC-CcEEEEcCCCc
Confidence            99999999999988777777888888777 4567888899999999999999999999987   3222 58999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhcc
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~  232 (255)
                      +|+.|+++.+.+.+|.+.++...+.....    ...+.......+|++|+++.|||+|.++++++|+++++|+++++.
T Consensus       238 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  311 (312)
T 3ko8_A          238 VRVLDIAQIVAEVLGLRPEIRLVPSTPDG----RGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW  311 (312)
T ss_dssp             EEHHHHHHHHHHHHTCCCEEEEC--------------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             eeHHHHHHHHHHHhCCCCceeecCccccc----cCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence            99999999999999998877765543211    011222356789999999999999999999999999999998753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=5.3e-32  Score=224.21  Aligned_cols=200  Identities=19%  Similarity=0.276  Sum_probs=175.1

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCC-ceEEEecCcc
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFS-NWASFRPQYM   87 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~-~~~ilRp~~v   87 (255)
                      +.++.+++++|++.+++||||+||.++|+.....+++|+++..|. +.|+.+|+..|         .++ +++++||+.+
T Consensus        96 ~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v  174 (321)
T 3vps_A           96 VDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR-SPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNV  174 (321)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccc
Confidence            889999999999999999999999999998877789999887764 67776665544         378 9999999999


Q ss_pred             cCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           88 IGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        88 ~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      ||++.... .++.++..+..+.++.+++++.+.++|+|++|+|++++.+++++..  | +||+++++.+|+.|+++.+. 
T Consensus       175 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~-  250 (321)
T 3vps_A          175 YGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP--S-VVNFGSGQSLSVNDVIRILQ-  250 (321)
T ss_dssp             ECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC--S-EEEESCSCCEEHHHHHHHHH-
T ss_pred             cCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC--C-eEEecCCCcccHHHHHHHHH-
Confidence            99987653 6778888888898888889999999999999999999999998765  5 99999999999999999999 


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCc-cCChHHHHHHHHHHHHHhcc
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS-TTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p-~~~~~~~i~~~~~~~~~~~~  232 (255)
                      .+|.+.++...+.....          .....+|++|++++|||.| .++++++|+++++|++++..
T Consensus       251 ~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          251 ATSPAAEVARKQPRPNE----------ITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             TTCTTCEEEEECCCTTC----------CSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             HhCCCCccccCCCCCCC----------cceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            99999888766654332          2567899999999999999 88999999999999998764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.97  E-value=2.9e-31  Score=223.66  Aligned_cols=207  Identities=16%  Similarity=0.184  Sum_probs=171.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----C--Cce
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----F--SNW   79 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----~--~~~   79 (255)
                      .++..++.|  +.++.+++++|++.+++ |||+||.++||.... +++|+++..|. +.|+.+|...|.     .  +++
T Consensus       107 ~~~~~~~~N--v~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~  181 (362)
T 3sxp_A          107 NQELVMKTN--YQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE-NVYGFSKLCMDEFVLSHSNDNVQ  181 (362)
T ss_dssp             CHHHHHHHH--THHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS-SHHHHHHHHHHHHHHHTTTTSCE
T ss_pred             CHHHHHHHH--HHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC-ChhHHHHHHHHHHHHHHhccCCE
Confidence            334444555  99999999999999987 999999999998766 89999887764 778877776554     3  789


Q ss_pred             EEEecCcccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           80 ASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      +++||++||||+...     ..+..++..+..+.++.+++++.+.++|+|++|+|++++.+++.+..  | +||+++++.
T Consensus       182 ~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~--g-~~~i~~~~~  258 (362)
T 3sxp_A          182 VGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS--G-VYNVGYSQA  258 (362)
T ss_dssp             EEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC--E-EEEESCSCE
T ss_pred             EEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC--C-EEEeCCCCC
Confidence            999999999998754     35678888888998888888889999999999999999999997753  4 999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      +|++|+++.+++.+| +.++...|....         .......+|++|+++.|||+|.++++++|+++++|+++..
T Consensus       259 ~s~~e~~~~i~~~~g-~~~~~~~~~~~~---------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  325 (362)
T 3sxp_A          259 RSYNEIVSILKEHLG-DFKVTYIKNPYA---------FFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIF  325 (362)
T ss_dssp             EEHHHHHHHHHHHHC-CCEEECCC----------------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC-
T ss_pred             ccHHHHHHHHHHHcC-CCceEECCCCCc---------CcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHh
Confidence            999999999999999 777765554411         1225678999999999999999999999999999998764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.97  E-value=2.9e-31  Score=219.95  Aligned_cols=203  Identities=18%  Similarity=0.274  Sum_probs=164.7

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC----CCCCCCChhHHHHHHHh---------hCCceEEEec
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEKYISE---------NFSNWASFRP   84 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~----~~~~~~~~y~~ek~~~e---------~~~~~~ilRp   84 (255)
                      +.++.+++++|++.+++||||+||.++|+.....+++|++    +..|..+.|+.+|...|         .+++++++||
T Consensus        84 ~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp  163 (321)
T 1e6u_A           84 MMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMP  163 (321)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence            8999999999999999999999999999987667888887    33332245665555433         3899999999


Q ss_pred             CcccCCCCCC-----CcHHHHHHHHHc----C-CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC-------CCCEE
Q 025270           85 QYMIGSGNNK-----DCEEWFFDRIVR----K-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA-------SSNIF  147 (255)
Q Consensus        85 ~~v~G~~~~~-----~~~~~~~~~~~~----~-~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~-------~~~~~  147 (255)
                      +.|||++...     .+++.++..+..    | .++.+++++.+.++|||++|+|++++.+++++...       .+++|
T Consensus       164 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~  243 (321)
T 1e6u_A          164 TNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHI  243 (321)
T ss_dssp             CEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCE
T ss_pred             CCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceE
Confidence            9999998753     356667777654    3 56777888899999999999999999999876542       24899


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      |+++++.+|++|+++.+.+.+|.+.++...+....          ......+|++|+++ |||+|.++++++|+++++|+
T Consensus       244 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~d~~k~~~-lG~~p~~~~~~~l~~~~~~~  312 (321)
T 1e6u_A          244 NVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPD----------GTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWF  312 (321)
T ss_dssp             EESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCC----------CCSBCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHH
T ss_pred             EeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCC----------CcccccCCHHHHHh-cCCccCCcHHHHHHHHHHHH
Confidence            99999999999999999999999877765543321          12456789999999 99999999999999999999


Q ss_pred             HHhc
Q 025270          228 VKIG  231 (255)
Q Consensus       228 ~~~~  231 (255)
                      +++.
T Consensus       313 ~~~~  316 (321)
T 1e6u_A          313 LENQ  316 (321)
T ss_dssp             HHTC
T ss_pred             HHHH
Confidence            8764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=4e-31  Score=218.29  Aligned_cols=203  Identities=19%  Similarity=0.258  Sum_probs=166.8

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccc-cccCC-CCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCc
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSA-GIYKP-ADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSN   78 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~-~vy~~-~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~   78 (255)
                      ..++.|  +.++.+++++|++.+++|||++||. ++|+. ....+.+|+++..+. +.|+.+|...|         .+++
T Consensus        88 ~~~~~N--~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~  164 (311)
T 2p5y_A           88 LDFEVN--LLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK-SPYAASKAAFEHYLSVYGQSYGLK  164 (311)
T ss_dssp             HHHHHH--THHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHH--HHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHcCCC
Confidence            344445  8999999999999999999999998 89986 445678888776553 67777665543         3899


Q ss_pred             eEEEecCcccCCCCCCC----cHHHHHHHHHcCCCeecc-----CCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEe
Q 025270           79 WASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIP-----GSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  149 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~i~-----~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i  149 (255)
                      ++++||++||||+....    .++.++..+..+.++.++     +++.+.++|+|++|+|++++.+++.+    +++||+
T Consensus       165 ~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i  240 (311)
T 2p5y_A          165 WVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNV  240 (311)
T ss_dssp             EEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEE
T ss_pred             EEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEe
Confidence            99999999999986542    456677788888877777     88888999999999999999999864    489999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHH
Q 025270          150 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK  229 (255)
Q Consensus       150 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~  229 (255)
                      ++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|+++ |||+|.++++++|+++++|+++
T Consensus       241 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~-lg~~p~~~~~~~l~~~~~~~~~  309 (311)
T 2p5y_A          241 GTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGD----------LERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHFRG  309 (311)
T ss_dssp             SCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTC----------CSBCCBCCHHHHT-TTCCCSSCHHHHHHHHHHHHHT
T ss_pred             CCCCCccHHHHHHHHHHHhCCCCCceeCCCCccc----------hhhccCCHHHHHH-CCCCCCCCHHHHHHHHHHHHHh
Confidence            9999999999999999999988777655543221          1457789999999 9999999999999999999975


Q ss_pred             h
Q 025270          230 I  230 (255)
Q Consensus       230 ~  230 (255)
                      +
T Consensus       310 ~  310 (311)
T 2p5y_A          310 A  310 (311)
T ss_dssp             C
T ss_pred             h
Confidence            3

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.97  E-value=8e-31  Score=219.10  Aligned_cols=204  Identities=19%  Similarity=0.246  Sum_probs=165.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh----------CCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~----------~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.++++||++||.++|+.....+++|+.+..+. +.|+.+|...|.          +++++++||++
T Consensus       105 n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~  183 (341)
T 3enk_A          105 NLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSAT-NPYGQTKLMAEQILRDVEAADPSWRVATLRYFN  183 (341)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence            4889999999999999999999999999998877889999887754 678777765542          48999999999


Q ss_pred             ccCCCCC-----------CCcHHHHHHHHHcC--CCeeccC------CCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCE
Q 025270           87 MIGSGNN-----------KDCEEWFFDRIVRK--RPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPE-AASSNI  146 (255)
Q Consensus        87 v~G~~~~-----------~~~~~~~~~~~~~~--~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~  146 (255)
                      |||+...           ..+++.+ .....+  ..+.++|      +|.+.++|||++|+|++++.++++.. ...+++
T Consensus       184 v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~  262 (341)
T 3enk_A          184 PVGAHESGLIGEDPAGIPNNLMPYV-AQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLT  262 (341)
T ss_dssp             EECCCTTSSCCCCCSSSCSSHHHHH-HHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             ccCCccccccCCCcccCccchHHHH-HHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceE
Confidence            9998642           1233433 333433  4456666      78899999999999999999998631 122689


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                      ||+++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+|.++++++|+++++|
T Consensus       263 ~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~  332 (341)
T 3enk_A          263 VNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGD----------VAECYANPAAAAETIGWKAERDLERMCADHWRW  332 (341)
T ss_dssp             EEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTC----------CSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_pred             EEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCC----------ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999998887766544322          256778999999999999999999999999999


Q ss_pred             HHHhcc
Q 025270          227 YVKIGR  232 (255)
Q Consensus       227 ~~~~~~  232 (255)
                      ++++..
T Consensus       333 ~~~~~~  338 (341)
T 3enk_A          333 QENNPR  338 (341)
T ss_dssp             HHHSTT
T ss_pred             HHhcCc
Confidence            998753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.97  E-value=1.6e-30  Score=218.38  Aligned_cols=207  Identities=17%  Similarity=0.174  Sum_probs=167.6

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEE
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      .++.|  +.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+.+|...|         .++++++
T Consensus       125 ~~~~n--~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~g~~~~i  201 (352)
T 1sb8_A          125 SNATN--IDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL-SPYAVTKYVNELYADVFSRCYGFSTIG  201 (352)
T ss_dssp             HHHHH--THHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred             HHHHH--HHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            34445  899999999999999999999999999998766788888877654 67776665433         3899999


Q ss_pred             EecCcccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccC
Q 025270           82 FRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVT  156 (255)
Q Consensus        82 lRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s  156 (255)
                      +||+.|||+....     ..++.++..+..|.++.+++++.+.++|+|++|+|++++.++.......+++||+++++.+|
T Consensus       202 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s  281 (352)
T 1sb8_A          202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTS  281 (352)
T ss_dssp             EEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEE
T ss_pred             EEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCcc
Confidence            9999999997653     24667788888888877888889999999999999999999987432236899999999999


Q ss_pred             HHHHHHHHHHHh---CCCCeee--ecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          157 LDGMAKLCAQAA---GLPVEIV--HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       157 ~~el~~~i~~~~---g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      ++|+++.+.+.+   |.+.+..  ..+...          .......+|++|++++|||.|.++++++|+++++|++++
T Consensus       282 ~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          282 LNQLFFALRDGLAENGVSYHREPVYRDFRE----------GDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCEEECCCT----------TCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCceecCCCc----------cchhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999   9876532  111111          112456789999999999999999999999999999865

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.97  E-value=4.7e-31  Score=223.56  Aligned_cols=219  Identities=14%  Similarity=0.198  Sum_probs=165.1

Q ss_pred             cccHHHHHHHHhhC-CcceEEEeccccccCCCCCCCCC--CCC---CC-CCCCChhHHHHHHHh---------hCCceEE
Q 025270           18 FRLQRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV--EGD---VV-KPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        18 ~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~~~~~~~--E~~---~~-~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      +.++.+++++|++. +++||||+||.++|+.....+++  |++   +. .+ .+.|+.+|...|         .++++++
T Consensus       127 v~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~gi~~~i  205 (377)
T 2q1s_A          127 TLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNN-DSPYSMSKIFGEFYSVYYHKQHQLPTVR  205 (377)
T ss_dssp             THHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCC-CSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCC-CCchHHHHHHHHHHHHHHHHHhCCCEEE
Confidence            88999999999999 89999999999999976666777  776   44 33 366776665443         3899999


Q ss_pred             EecCcccCCCC---------C-----CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHH-HHHHhcCCCcCCCCE
Q 025270           82 FRPQYMIGSGN---------N-----KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM-LTLAVENPEAASSNI  146 (255)
Q Consensus        82 lRp~~v~G~~~---------~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~-~~~~l~~~~~~~~~~  146 (255)
                      +||+.|||+..         .     ...++.++..+..+.++.+++++++.++|+|++|+|++ ++.+++++.  .| +
T Consensus       206 lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~  282 (377)
T 2q1s_A          206 ARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG-V  282 (377)
T ss_dssp             EEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE-E
T ss_pred             EeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-e
Confidence            99999999987         3     23567788888888888788888899999999999999 999998765  35 9


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCC-ceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNM-HFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      ||+++++.+|++|+++.+.+.+|.+.++...|....          ... ...+|++|++++|||+|.++++++|+++++
T Consensus       283 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~----------~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~  352 (377)
T 2q1s_A          283 YNIASGKETSIADLATKINEITGNNTELDRLPKRPW----------DNSGKRFGSPEKARRELGFSADVSIDDGLRKTIE  352 (377)
T ss_dssp             EECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGG----------GCC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred             EEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCcc----------ccccccccCHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999998776654442211          113 678899999999999999999999999999


Q ss_pred             HHHHhccccccccchhhHHHHHhcCC
Q 025270          226 EYVKIGRDKKAMQFEIDDKILESLKV  251 (255)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (255)
                      |++++.. ..+......+..|+.+++
T Consensus       353 ~~~~~~~-~~~~~~~~~~~~~~~~~~  377 (377)
T 2q1s_A          353 WTKANLA-VIEQIMRKHDSALATYGK  377 (377)
T ss_dssp             HHHHTHH-HHHHHHHTTHHHHHHCC-
T ss_pred             HHHHhhh-hhhheeeccchHHhhccC
Confidence            9987642 222333355566776653

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=2.9e-30  Score=215.45  Aligned_cols=207  Identities=15%  Similarity=0.226  Sum_probs=168.0

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceE
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWA   80 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~   80 (255)
                      ..++.|  +.++.+++++|++.+++||||+||.++||.....+++|+++..+. +.|+.+|...|         .+++++
T Consensus        98 ~~~~~N--v~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~g~~~~  174 (337)
T 1r6d_A           98 VFTETN--VQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN-SPYAASKAGSDLVARAYHRTYGLDVR  174 (337)
T ss_dssp             HHHHHH--THHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred             HHHHHH--HHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCC-CchHHHHHHHHHHHHHHHHHHCCCEE
Confidence            344445  899999999999999999999999999997656678888776653 67776665443         389999


Q ss_pred             EEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           81 SFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        81 ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      ++||+.+||+.... ..++.++..+..+.++.+++++.+.++++|++|+|++++.+++++..  |++||+++++.+|+.|
T Consensus       175 ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~v~~~~~~s~~e  252 (337)
T 1r6d_A          175 ITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA--GEIYHIGGGLELTNRE  252 (337)
T ss_dssp             EEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHH
T ss_pred             EEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCC--CCEEEeCCCCCccHHH
Confidence            99999999998654 35677788888888888888888999999999999999999986543  6899999999999999


Q ss_pred             HHHHHHHHhCCCCe-eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          160 MAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       160 l~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      +++.+.+.+|.+.+ +...+... +         ......+|++|++++|||+|.++++++|+++++|++++.
T Consensus       253 ~~~~i~~~~g~~~~~~~~~~~~~-~---------~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  315 (337)
T 1r6d_A          253 LTGILLDSLGADWSSVRKVADRK-G---------HDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENR  315 (337)
T ss_dssp             HHHHHHHHHTCCGGGEEEECCCT-T---------CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHhCCCcccceecCCCC-C---------CcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhch
Confidence            99999999998753 22222111 1         113456899999999999999999999999999998753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.97  E-value=5.4e-31  Score=220.68  Aligned_cols=201  Identities=20%  Similarity=0.262  Sum_probs=170.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCC--CCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKP--ADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~--~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~   85 (255)
                      |+.++.+++++|++.+++||||+||.++|+.  ....+++|+++..+. +.|+.+|+..|         .+++++++||+
T Consensus       102 nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~  180 (347)
T 4id9_A          102 NVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN-SPYGLTKLLGEELVRFHQRSGAMETVILRFS  180 (347)
T ss_dssp             HTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC-ChHHHHHHHHHHHHHHHHHhcCCceEEEccc
Confidence            3899999999999999999999999999998  456788999887764 67776666544         37999999999


Q ss_pred             ccc-------------CCCCC------------CCcHHHHHHHHHcCCCeeccCCCCcceee----eeHHHHHHHHHHHh
Q 025270           86 YMI-------------GSGNN------------KDCEEWFFDRIVRKRPVPIPGSGMQFTNI----AHVRDLSSMLTLAV  136 (255)
Q Consensus        86 ~v~-------------G~~~~------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----i~v~D~a~~~~~~l  136 (255)
                      .||             ||+..            ...+..++..+..|.++.+++++.+.++|    +|++|+|++++.++
T Consensus       181 ~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~  260 (347)
T 4id9_A          181 HTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLAL  260 (347)
T ss_dssp             EEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHH
T ss_pred             eEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHh
Confidence            999             77633            23566778888888888888888888999    99999999999999


Q ss_pred             cCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCCh
Q 025270          137 ENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNL  216 (255)
Q Consensus       137 ~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  216 (255)
                      +++... +++||+++++.+|+.|+++.+++.+|.+.++...|...             ....+|++|++++|||.|.+++
T Consensus       261 ~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-------------~~~~~d~~k~~~~lG~~p~~~~  326 (347)
T 4id9_A          261 DHPEAA-GGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDG-------------VYYHTSNERIRNTLGFEAEWTM  326 (347)
T ss_dssp             HCGGGT-TEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCC-------------CBCCBCCHHHHHHHCCCCCCCH
T ss_pred             cCcccC-CCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCcc-------------cccccCHHHHHHHhCCCCCCCH
Confidence            987543 58999999999999999999999999987776544432             2567899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcc
Q 025270          217 PEDLKERFEEYVKIGR  232 (255)
Q Consensus       217 ~~~i~~~~~~~~~~~~  232 (255)
                      +++|+++++|++++..
T Consensus       327 ~~~l~~~~~~~~~~~~  342 (347)
T 4id9_A          327 DRMLEEAATARRQRLA  342 (347)
T ss_dssp             HHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhhhh
Confidence            9999999999988753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=2.2e-30  Score=217.04  Aligned_cols=205  Identities=19%  Similarity=0.226  Sum_probs=163.9

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh--------C--CceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN--------F--SNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~--------~--~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.++++|||+||.++|+.....+++|+++..|..+.|+.+|...|.        +  ++++++||++
T Consensus       108 n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~  187 (348)
T 1ek6_A          108 NLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFN  187 (348)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeecc
Confidence            38999999999999999999999999999987667889988876644778777765442        4  8999999999


Q ss_pred             ccCCCCC-----------CCcHHHHHHHHH-cCCCeeccC------CCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEE
Q 025270           87 MIGSGNN-----------KDCEEWFFDRIV-RKRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIF  147 (255)
Q Consensus        87 v~G~~~~-----------~~~~~~~~~~~~-~~~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~  147 (255)
                      +||++..           ..+++.++..+. .+..+.+++      +|.+.++|||++|+|++++.+++++. ...+++|
T Consensus       188 v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~  267 (348)
T 1ek6_A          188 PTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIY  267 (348)
T ss_dssp             EECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred             ccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEE
Confidence            9998531           224555555555 566666666      57888999999999999999998653 2212799


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      |+++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+|.++++++|+++++|+
T Consensus       268 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~  337 (348)
T 1ek6_A          268 NLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGD----------VAACYANPSLAQEELGWTAALGLDRMCEDLWRWQ  337 (348)
T ss_dssp             EECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTC----------CSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHH
T ss_pred             EeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCcc----------chhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            999999999999999999999988776655433211          1456789999999999999999999999999999


Q ss_pred             HHhc
Q 025270          228 VKIG  231 (255)
Q Consensus       228 ~~~~  231 (255)
                      +++.
T Consensus       338 ~~~~  341 (348)
T 1ek6_A          338 KQNP  341 (348)
T ss_dssp             HHCT
T ss_pred             Hhcc
Confidence            8763

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.97  E-value=2.2e-30  Score=214.73  Aligned_cols=208  Identities=21%  Similarity=0.238  Sum_probs=167.4

Q ss_pred             ceEEecccCcccHHHHHHHHhhC-CcceEEEeccccccCCC--CCCCCCCCCCCCCCCChhHHHHHHHh---------hC
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAGHVQVEKYISE---------NF   76 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~--~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~   76 (255)
                      +..++.|  +.++.+++++|++. +++||||+||.++|+..  ...+++|+++..+. +.|+.+|...|         .+
T Consensus        95 ~~~~~~N--v~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~g  171 (321)
T 2pk3_A           95 KGTFSTN--VFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPM-SPYGVSKASVGMLARQYVKAYG  171 (321)
T ss_dssp             HHHHHHH--HHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC-SHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC-CccHHHHHHHHHHHHHHHHHcC
Confidence            3344455  89999999999876 68999999999999875  55688888877653 67776665543         28


Q ss_pred             CceEEEecCcccCCCCCCC-cHHHHHHHHHc---C--CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           77 SNWASFRPQYMIGSGNNKD-CEEWFFDRIVR---K--RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~---~--~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      ++++++||+++||++.... .++.++..+..   |  .++.+++++...++++|++|+|++++.+++++..  |++||++
T Consensus       172 i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--g~~~~i~  249 (321)
T 2pk3_A          172 MDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKT--GDVYNVC  249 (321)
T ss_dssp             CEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEES
T ss_pred             CCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCC--CCeEEeC
Confidence            9999999999999987653 45666776666   7  5667778888899999999999999999987633  6899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHH
Q 025270          151 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK  229 (255)
Q Consensus       151 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~  229 (255)
                      +++.+|++|+++.+.+.+|.+.++...|....        +.......+|++|++++|||+|.++++++|+++++|+++
T Consensus       250 ~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~--------~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~  320 (321)
T 2pk3_A          250 SGIGTRIQDVLDLLLAMANVKIDTELNPLQLR--------PSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ  320 (321)
T ss_dssp             CSCEEEHHHHHHHHHHHSSSCCEEEECGGGCC--------SSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred             CCCCeeHHHHHHHHHHHhCCCCceeeccccCC--------CcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhc
Confidence            99999999999999999998877665442111        111256788999999999999999999999999999975

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.97  E-value=3.8e-30  Score=214.07  Aligned_cols=204  Identities=17%  Similarity=0.221  Sum_probs=162.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+.+|...|         ++++++++||++|
T Consensus        94 n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v  172 (330)
T 2c20_A           94 NVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPT-NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNV  172 (330)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCS-SHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEE
T ss_pred             HhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCC-ChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcc
Confidence            3889999999999999999999999999998766788998887653 67776665543         2799999999999


Q ss_pred             cCCCCC----------CCcHHHHHHHHHc-CCCeeccC------CCCcceeeeeHHHHHHHHHHHhcCCCcC-CCCEEEe
Q 025270           88 IGSGNN----------KDCEEWFFDRIVR-KRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPEAA-SSNIFNL  149 (255)
Q Consensus        88 ~G~~~~----------~~~~~~~~~~~~~-~~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~~~-~~~~~~i  149 (255)
                      ||++..          ..+++.+++.+.. +..+.+++      ++++.++|||++|+|++++.+++++... .+++||+
T Consensus       173 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni  252 (330)
T 2c20_A          173 AGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNL  252 (330)
T ss_dssp             ECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             cCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEe
Confidence            998632          1234445444443 33466665      6788899999999999999999865321 2489999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHHHHHHHHHHHH
Q 025270          150 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFEEYV  228 (255)
Q Consensus       150 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i~~~~~~~~  228 (255)
                      ++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+|.+ +++++|+++++|++
T Consensus       253 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~  322 (330)
T 2c20_A          253 GNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGD----------PARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQ  322 (330)
T ss_dssp             CCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSC----------CSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCc----------ccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHH
Confidence            9999999999999999999988776655433211          145778999999999999998 99999999999998


Q ss_pred             Hhc
Q 025270          229 KIG  231 (255)
Q Consensus       229 ~~~  231 (255)
                      ++.
T Consensus       323 ~~~  325 (330)
T 2c20_A          323 KQP  325 (330)
T ss_dssp             HCS
T ss_pred             Hhh
Confidence            765

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.97  E-value=5.2e-30  Score=214.73  Aligned_cols=229  Identities=15%  Similarity=0.147  Sum_probs=176.4

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCC------------CCCCCCCCCCCCCChhHHHHHHHh-
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE------------PPHVEGDVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~------------~~~~E~~~~~~~~~~y~~ek~~~e-   74 (255)
                      ++..++.|  +.++.+++++|.+.++ ||||+||.++||....            .+++|+++..+. +.|+.+|...| 
T Consensus        95 ~~~~~~~N--v~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~  170 (348)
T 1oc2_A           95 PSPFIHTN--FIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-SPYSSTKAASDL  170 (348)
T ss_dssp             CHHHHHHH--THHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC-SHHHHHHHHHHH
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC-CccHHHHHHHHH
Confidence            33444555  9999999999999888 9999999999986432            577888776653 67776665543 


Q ss_pred             --------hCCceEEEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                              .+++++++||+.|||++... ..+..++..+..+.++.+++++.+.++++|++|+|++++.+++++..  |+
T Consensus       171 ~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--g~  248 (348)
T 1oc2_A          171 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM--GE  248 (348)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT--TC
T ss_pred             HHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCCCC--CC
Confidence                    38999999999999998754 35667788888888888888888999999999999999999986543  68


Q ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCe-eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCC-hHHHHHHH
Q 025270          146 IFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTN-LPEDLKER  223 (255)
Q Consensus       146 ~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~i~~~  223 (255)
                      +||++++..+|++|+++.+.+.+|.+.+ +...+... +         ......+|++|+++.|||+|.++ ++++|+++
T Consensus       249 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~---------~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~  318 (348)
T 1oc2_A          249 TYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRA-G---------HDLRYAIDASKLRDELGWTPQFTDFSEGLEET  318 (348)
T ss_dssp             EEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCT-T---------CCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHH
T ss_pred             eEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCC-C---------cccccccCHHHHHHHcCCCCCCCcHHHHHHHH
Confidence            9999999999999999999999998653 22222111 1         11345689999999999999998 99999999


Q ss_pred             HHHHHHhccccccccchhhHHHHHhcCCCC
Q 025270          224 FEEYVKIGRDKKAMQFEIDDKILESLKVPI  253 (255)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (255)
                      ++|++++.... ....+.-++.+++++.+|
T Consensus       319 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  347 (348)
T 1oc2_A          319 IQWYTDNQDWW-KAEKEAVEANYAKTQEVI  347 (348)
T ss_dssp             HHHHHHTHHHH-HHHHHHHHHHHHTTCCBC
T ss_pred             HHHHHHhhhhc-cchHHHHHhhhHhhhhhc
Confidence            99998764211 112234455677777765

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.97  E-value=8.3e-30  Score=212.51  Aligned_cols=207  Identities=17%  Similarity=0.204  Sum_probs=164.8

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCc
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSN   78 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~   78 (255)
                      +..++.|  +.++.+++++|.+.++ +||||+||.++||.....+++|+++..+. +.|+.+|...|         ++++
T Consensus        96 ~~~~~~N--v~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~  172 (336)
T 2hun_A           96 EIFLHSN--VIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPS-SPYSATKAASDMLVLGWTRTYNLN  172 (336)
T ss_dssp             HHHHHHH--HHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC-SHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC-CccHHHHHHHHHHHHHHHHHhCCC
Confidence            3344455  8999999999998875 79999999999997656688888876653 67777665543         3899


Q ss_pred             eEEEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCH
Q 025270           79 WASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  157 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~  157 (255)
                      ++++||+.|||+.... ..++.++..+..+..+.+++++.+.++++|++|+|++++.++++...  |++||++++..+|+
T Consensus       173 ~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~~~s~  250 (336)
T 2hun_A          173 ASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES--REIYNISAGEEKTN  250 (336)
T ss_dssp             EEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCSCEECH
T ss_pred             EEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC--CCEEEeCCCCcccH
Confidence            9999999999998654 35677788888888888888888999999999999999999986543  68999999999999


Q ss_pred             HHHHHHHHHHhCCCCe-eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          158 DGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       158 ~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      .|+++.+.+.+|.+.+ +...+... +         ......+|++|++++|||+|.++++++|+++++|++++
T Consensus       251 ~e~~~~i~~~~g~~~~~~~~~~~~~-~---------~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          251 LEVVKIILRLMGKGEELIELVEDRP-G---------HDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             HHHHHHHHHHTTCCSTTEEEECCCT-T---------CCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCcccccccCCCC-C---------chhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence            9999999999998654 22222111 1         11345689999999999999999999999999999876

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.97  E-value=7.6e-30  Score=213.47  Aligned_cols=200  Identities=21%  Similarity=0.211  Sum_probs=164.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC-----CCCCCCChhHHHHHHHh---------hCCceEEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGHVQVEKYISE---------NFSNWASF   82 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~~y~~ek~~~e---------~~~~~~il   82 (255)
                      |+.++.+++++|++.++ ||||+||.++|+.....+++|+.     +..+ .+.|+.+|+..|         .+++++++
T Consensus       118 n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~il  195 (343)
T 2b69_A          118 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP-RACYDEGKRVAETMCYAYMKQEGVEVRVA  195 (343)
T ss_dssp             HHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST-THHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred             HHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCC-CCchHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence            38899999999999887 89999999999876666777763     3322 355665554433         38999999


Q ss_pred             ecCcccCCCCCC---CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           83 RPQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        83 Rp~~v~G~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      ||+.|||++...   ..+..++..+..+.++.+++++.+.++|+|++|+|++++.+++.+.   +++||+++++.+|++|
T Consensus       196 rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e  272 (343)
T 2b69_A          196 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV---SSPVNLGNPEEHTILE  272 (343)
T ss_dssp             EECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC---CSCEEESCCCEEEHHH
T ss_pred             EEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC---CCeEEecCCCCCcHHH
Confidence            999999997643   3567788888888888888888999999999999999999998653   4899999999999999


Q ss_pred             HHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      +++.+.+.+|.+.++...|.....          .....+|++|++++|||+|.++++++|+++++|++++.
T Consensus       273 ~~~~i~~~~g~~~~~~~~p~~~~~----------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  334 (343)
T 2b69_A          273 FAQLIKNLVGSGSEIQFLSEAQDD----------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL  334 (343)
T ss_dssp             HHHHHHHHHTCCCCEEEECCCTTC----------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCceeCCCCCCC----------CceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999998777665543221          14567899999999999999999999999999998753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.97  E-value=1.9e-31  Score=225.47  Aligned_cols=214  Identities=20%  Similarity=0.220  Sum_probs=165.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC------CCCChhHHHHH-----HHhh---CCceEEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK------PDAGHVQVEKY-----ISEN---FSNWASF   82 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~------~~~~~y~~ek~-----~~e~---~~~~~il   82 (255)
                      |+.++.+++++|++.+ +||||+||.++|+.....++.|++...      .+.+.|+.+|+     +.++   +++++++
T Consensus       118 nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~il  196 (372)
T 3slg_A          118 DFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLF  196 (372)
T ss_dssp             HTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence            4899999999999999 899999999999987777787777441      22245665554     4444   8999999


Q ss_pred             ecCcccCCCCCC---------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           83 RPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        83 Rp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ||++|||++...         .++..++..+..|.++.+++++.+.++|||++|+|++++.+++++.. ..+++||++++
T Consensus       197 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~  276 (372)
T 3slg_A          197 RPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNP  276 (372)
T ss_dssp             EECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             ccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCC
Confidence            999999998652         25778888899999988988889999999999999999999998752 23689999994


Q ss_pred             -CccCHHHHHHHHHHHhCCCCeeeecCCCccccc--cc---ccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          153 -RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID--AK---KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       153 -~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                       +.+|+.|+++.+++.+|.+.++...+.......  ..   ...........+|++|++++|||+|.++++++|+++++|
T Consensus       277 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~  356 (372)
T 3slg_A          277 NNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEA  356 (372)
T ss_dssp             TCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence             799999999999999998765443321110000  00   000012356778999999999999999999999999999


Q ss_pred             HHHhc
Q 025270          227 YVKIG  231 (255)
Q Consensus       227 ~~~~~  231 (255)
                      |+++.
T Consensus       357 ~~~~~  361 (372)
T 3slg_A          357 YRGHV  361 (372)
T ss_dssp             HTTCH
T ss_pred             HHHHH
Confidence            97753

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=1.4e-29  Score=206.72  Aligned_cols=205  Identities=15%  Similarity=0.140  Sum_probs=166.5

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----hCCceEEEe
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----NFSNWASFR   83 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----~~~~~~ilR   83 (255)
                      +..++.|  +.++.+++++|++.++ ||||+||.++|+.....+++|+++..|. +.|+.+|...|     +..+++++|
T Consensus        77 ~~~~~~n--~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~ilR  152 (287)
T 3sc6_A           77 DLAYVIN--AIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPI-NIYGASKYAGEQFVKELHNKYFIVR  152 (287)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHCSSEEEEE
T ss_pred             HHHHHHH--HHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHhCCCcEEEe
Confidence            3344445  8999999999999998 6999999999998877889999988764 67776665544     477999999


Q ss_pred             cCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHH
Q 025270           84 PQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL  163 (255)
Q Consensus        84 p~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~  163 (255)
                      |+.|||++.. .++..++..+..+.++.+++  ++.++++|++|+|++++.+++++.   +++||+++++.+|++|+++.
T Consensus       153 ~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~  226 (287)
T 3sc6_A          153 TSWLYGKYGN-NFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL---YGTYHVSNTGSCSWFEFAKK  226 (287)
T ss_dssp             ECSEECSSSC-CHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC---CEEEECCCBSCEEHHHHHHH
T ss_pred             eeeecCCCCC-cHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC---CCeEEEcCCCcccHHHHHHH
Confidence            9999998754 36677788888888777775  488999999999999999999876   48999999999999999999


Q ss_pred             HHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHH
Q 025270          164 CAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK  229 (255)
Q Consensus       164 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~  229 (255)
                      +++.+|.+.++...+......     .........+|++|++ .|||.|.++++++|+++++|+++
T Consensus       227 i~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          227 IFSYANMKVNVLPVSTEEFGA-----AAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             HHHHHTCCCEEEEECHHHHCC-----SSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             HHHHcCCCcceeeeehhhcCc-----ccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhc
Confidence            999999988777654321110     0112255778999999 89999999999999999999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=3e-29  Score=209.02  Aligned_cols=210  Identities=13%  Similarity=0.068  Sum_probs=165.0

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCc
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSN   78 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~   78 (255)
                      +..++.|  +.++.+++++|++.++ ++|||+||.++|+.....+++|+++..|. +.|+.+|...|         ++++
T Consensus       107 ~~~~~~n--~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~~~~  183 (335)
T 1rpn_A          107 VTTGVVD--GLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR-SPYGVAKLYGHWITVNYRESFGLH  183 (335)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC-ChhHHHHHHHHHHHHHHHHHcCCc
Confidence            3344445  8899999999999886 89999999999998766788898887764 67776665544         2899


Q ss_pred             eEEEecCcccCCCCCCCc----HHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           79 WASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      ++++||+++|||+....+    +..++..+..|.. ...++++++.++|+|++|+|++++.+++++.   +++||+++++
T Consensus       184 ~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~~  260 (335)
T 1rpn_A          184 ASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK---ADDYVVATGV  260 (335)
T ss_dssp             EEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS---CCCEEECCSC
T ss_pred             EEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC---CCEEEEeCCC
Confidence            999999999999765443    4455666677764 3456888999999999999999999998765   3899999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCee-eecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          154 AVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+|++|+++.+.+.+|.+.+. ...+...       ..+.......+|++|++++|||+|.++++++|+++++|++++.
T Consensus       261 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  332 (335)
T 1rpn_A          261 TTTVRDMCQIAFEHVGLDYRDFLKIDPAF-------FRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRV  332 (335)
T ss_dssp             EEEHHHHHHHHHHTTTCCGGGTEEECGGG-------CCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHhCCCccccccccccc-------cCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhh
Confidence            999999999999999986431 1121110       0111224567899999999999999999999999999998764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.97  E-value=1.6e-29  Score=214.34  Aligned_cols=207  Identities=18%  Similarity=0.187  Sum_probs=166.9

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCC-----CCCCCCC--CCCCCCChhHHHHHHHh------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE-----PPHVEGD--VVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~-----~~~~E~~--~~~~~~~~y~~ek~~~e------   74 (255)
                      ++..++.|  +.++.+++++|++.+++||||+||.++|+....     .+++|++  +..+ .+.|+.+|...|      
T Consensus       114 ~~~~~~~N--v~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~-~~~Y~~sK~~~E~~~~~~  190 (379)
T 2c5a_A          114 HSVIMYNN--TMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEP-QDAFGLEKLATEELCKHY  190 (379)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCC-SSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCC-CChhHHHHHHHHHHHHHH
Confidence            33444455  889999999999999999999999999985321     3466665  3333 366776665443      


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-----cHHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                         ++++++++||+.|||++....     .+..++..+..+.+ +.+++++.+.++|+|++|+|++++.+++++.   ++
T Consensus       191 ~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~---~~  267 (379)
T 2c5a_A          191 NKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---RE  267 (379)
T ss_dssp             HHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSSC---CS
T ss_pred             HHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhccC---CC
Confidence               389999999999999976532     56678888877876 7778888899999999999999999998762   58


Q ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          146 IFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       146 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      +||+++++.+|++|+++.+.+.+|.+.++...|.+..           .....+|++|++++|||+|.++++++|+++++
T Consensus       268 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~-----------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~  336 (379)
T 2c5a_A          268 PVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEG-----------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYF  336 (379)
T ss_dssp             CEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCC-----------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHH
T ss_pred             eEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCCC-----------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence            9999999999999999999999998877766554321           14467899999999999999999999999999


Q ss_pred             HHHHhc
Q 025270          226 EYVKIG  231 (255)
Q Consensus       226 ~~~~~~  231 (255)
                      |++++.
T Consensus       337 ~~~~~~  342 (379)
T 2c5a_A          337 WIKEQI  342 (379)
T ss_dssp             HHHHHH
T ss_pred             HHHHhH
Confidence            998764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=2.1e-29  Score=210.26  Aligned_cols=205  Identities=21%  Similarity=0.251  Sum_probs=158.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h-CCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N-FSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~-~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.++++||++||.++|+.....+++|+.+..+..+.|+.+|...|         . +++++++||++
T Consensus       100 n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~  179 (338)
T 1udb_A          100 NVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN  179 (338)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeece
Confidence            3899999999999989999999999999987666678888776554567877765543         2 68999999999


Q ss_pred             ccCCCCC-----------CCcHHHHHHHHH-cCCCeeccC------CCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEE
Q 025270           87 MIGSGNN-----------KDCEEWFFDRIV-RKRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIF  147 (255)
Q Consensus        87 v~G~~~~-----------~~~~~~~~~~~~-~~~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~  147 (255)
                      +||+...           ..+++.++.... .+..+.+++      +|.+.++|||++|+|++++.++++.. ...+++|
T Consensus       180 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~y  259 (338)
T 1udb_A          180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIY  259 (338)
T ss_dssp             EECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             ecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEE
Confidence            9998421           113444444443 334455544      56788999999999999999997532 2213799


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      |+++++.+|++|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+|.++++++|+++++|+
T Consensus       260 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~  329 (338)
T 1udb_A          260 NLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD----------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQ  329 (338)
T ss_dssp             EESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTC----------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred             EecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCc----------hhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHH
Confidence            999999999999999999999987766554432211          1356789999999999999999999999999999


Q ss_pred             HHhc
Q 025270          228 VKIG  231 (255)
Q Consensus       228 ~~~~  231 (255)
                      +++.
T Consensus       330 ~~~~  333 (338)
T 1udb_A          330 SRHP  333 (338)
T ss_dssp             HHCT
T ss_pred             Hhcc
Confidence            8764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=2.2e-29  Score=210.52  Aligned_cols=214  Identities=15%  Similarity=0.182  Sum_probs=163.4

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC------CCCChhHHHHHHHh---------hCCceEEE
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK------PDAGHVQVEKYISE---------NFSNWASF   82 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~------~~~~~y~~ek~~~e---------~~~~~~il   82 (255)
                      +.++.+++++|++.+ +||||+||.++|+.....+++|+++..      .+.+.|+.+|...|         .+++++++
T Consensus        95 ~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~il  173 (345)
T 2bll_A           95 FEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF  173 (345)
T ss_dssp             THHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred             HHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            889999999999988 899999999999987666777776531      12245766665433         38999999


Q ss_pred             ecCcccCCCCCC---------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           83 RPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        83 Rp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ||+.|||++...         ..+..++..+..|.++.+++++.+.++|+|++|+|++++.+++++.. ..+++||++++
T Consensus       174 rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~  253 (345)
T 2bll_A          174 RPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (345)
T ss_dssp             EECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             cCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCC
Confidence            999999998642         24567788888898888888888999999999999999999987642 23589999998


Q ss_pred             C-ccCHHHHHHHHHHHhCCCCeeeecCCCccccc--cccc---CCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          153 R-AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID--AKKA---FPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       153 ~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                      + .+|++|+++.+.+.+|.+......+.......  ....   .........+|++|++++|||+|.++++++|+++++|
T Consensus       254 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~  333 (345)
T 2bll_A          254 ENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDF  333 (345)
T ss_dssp             TSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHH
Confidence            6 89999999999999987654433333211000  0000   0011245678999999999999999999999999999


Q ss_pred             HHHhcc
Q 025270          227 YVKIGR  232 (255)
Q Consensus       227 ~~~~~~  232 (255)
                      ++++..
T Consensus       334 ~~~~~~  339 (345)
T 2bll_A          334 FLRTVD  339 (345)
T ss_dssp             HHHHSC
T ss_pred             HHHcCC
Confidence            987754

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=1.8e-29  Score=215.15  Aligned_cols=203  Identities=19%  Similarity=0.254  Sum_probs=160.3

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCC-------CCCCCCCCCCCCCCChhHHHHHHHh---------hCCceE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD-------EPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~-------~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~   80 (255)
                      |+.++.+++++|++.++++|||+||.++|+...       ..+++|+++..|. +.|+.+|+..|         ++++++
T Consensus       120 Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~gi~~~  198 (397)
T 1gy8_A          120 NVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAYGIKGI  198 (397)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred             HhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccCCCCCC-CchHHHHHHHHHHHHHHHHHHCCcEE
Confidence            389999999999999999999999999998765       5688888877653 67777666544         289999


Q ss_pred             EEecCcccCCCCC----------CCcHHHHH----HHHHcCC------------CeeccC------CCCcceeeeeHHHH
Q 025270           81 SFRPQYMIGSGNN----------KDCEEWFF----DRIVRKR------------PVPIPG------SGMQFTNIAHVRDL  128 (255)
Q Consensus        81 ilRp~~v~G~~~~----------~~~~~~~~----~~~~~~~------------~~~i~~------~~~~~~~~i~v~D~  128 (255)
                      ++||++|||++..          ..+++.++    .++..+.            .+.+++      ++.+.++|||++|+
T Consensus       199 ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv  278 (397)
T 1gy8_A          199 CLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL  278 (397)
T ss_dssp             EEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             EEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHH
Confidence            9999999999642          22444444    2444443            466666      67889999999999


Q ss_pred             HHHHHHHhcCCCcCC----C---CEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCH
Q 025270          129 SSMLTLAVENPEAAS----S---NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP  201 (255)
Q Consensus       129 a~~~~~~l~~~~~~~----~---~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  201 (255)
                      |++++.+++++....    +   ++||+++++.+|++|+++.+.+.+|.+.++...+.....          .....+|+
T Consensus       279 a~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~~~~~d~  348 (397)
T 1gy8_A          279 ASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGD----------PAYLVAAS  348 (397)
T ss_dssp             HHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCCTTC----------CSEECBCC
T ss_pred             HHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCCCCeeeCCCCCCc----------ccccccCH
Confidence            999999997643221    3   799999999999999999999999988776655432211          14577899


Q ss_pred             HHHHHhcCCCccC-ChHHHHHHHHHHHHHh
Q 025270          202 RAAKDILGWRSTT-NLPEDLKERFEEYVKI  230 (255)
Q Consensus       202 ~k~~~~lG~~p~~-~~~~~i~~~~~~~~~~  230 (255)
                      +|++++|||.|.+ +++++|+++++|++++
T Consensus       349 ~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          349 DKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             HHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            9999999999999 9999999999999876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.96  E-value=3.9e-29  Score=204.08  Aligned_cols=191  Identities=10%  Similarity=0.057  Sum_probs=155.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH----HhhCCceEEEecCcccCCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI----SENFSNWASFRPQYMIGSGN   92 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~----~e~~~~~~ilRp~~v~G~~~   92 (255)
                      |+.++.+++++|++.+++||||+||.++|+.....+++|+++..|. +.|+.+|..    .++ ++++++||++|||++.
T Consensus        85 n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~-~~~~ilR~~~v~G~~~  162 (286)
T 3gpi_A           85 YVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK-DFSGKRMLEAEALLAA-YSSTILRFSGIYGPGR  162 (286)
T ss_dssp             SHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC-SHHHHHHHHHHHHGGG-SSEEEEEECEEEBTTB
T ss_pred             HHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC-ChhhHHHHHHHHHHhc-CCeEEEecccccCCCc
Confidence            4999999999999999999999999999998877788999887764 666655544    444 8999999999999976


Q ss_pred             CCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-cCCCCEEEecCCCccCHHHHHHHHHHHhCCC
Q 025270           93 NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  171 (255)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  171 (255)
                      .     .++..+.. .  ...+++...++|+|++|+|++++.+++++. ...+++||+++++.+|+.|+++.+++.+|.+
T Consensus       163 ~-----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~  234 (286)
T 3gpi_A          163 L-----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIA  234 (286)
T ss_dssp             C-----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             h-----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCC
Confidence            5     34555555 2  234678889999999999999999999741 1126999999999999999999999999987


Q ss_pred             CeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHHHHHHHHHHHHHhc
Q 025270          172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFEEYVKIG  231 (255)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i~~~~~~~~~~~  231 (255)
                      .++...+  .           ......+|++|++ .|||+|.+ +++++|+++++|+....
T Consensus       235 ~~~~~~~--~-----------~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~~  281 (286)
T 3gpi_A          235 YPAGATP--P-----------VQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREGH  281 (286)
T ss_dssp             CCCSCCC--C-----------BCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC--
T ss_pred             CCCCCCc--c-----------cCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhccc
Confidence            7664322  1           1256789999998 89999999 69999999999987654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.96  E-value=1.9e-29  Score=211.13  Aligned_cols=210  Identities=16%  Similarity=0.236  Sum_probs=163.5

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcc-eEEEeccccccCCCCCCC----------------CCCCCCCCCCCChhHHHHH
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVK-QFLFISSAGIYKPADEPP----------------HVEGDVVKPDAGHVQVEKY   71 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~-r~i~~Ss~~vy~~~~~~~----------------~~E~~~~~~~~~~y~~ek~   71 (255)
                      +..++.|  +.++.+++++|++.+++ +|||+||.++|+.....+                ++|+.+..+ .+.|+.+|.
T Consensus        94 ~~~~~~n--v~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~-~~~Y~~sK~  170 (347)
T 1orr_A           94 CMDFEIN--VGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF-HSPYGCSKG  170 (347)
T ss_dssp             HHHHHHH--HHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC-CHHHHHHHH
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCC-CCchHHHHH
Confidence            3344455  89999999999998886 999999999998654332                455555543 356776665


Q ss_pred             HHh---------hCCceEEEecCcccCCCCCC----CcHHHHHHHHHcCC-----CeeccCCCCcceeeeeHHHHHHHHH
Q 025270           72 ISE---------NFSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKR-----PVPIPGSGMQFTNIAHVRDLSSMLT  133 (255)
Q Consensus        72 ~~e---------~~~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~i~v~D~a~~~~  133 (255)
                      ..|         .+++++++||+.|||+....    ..+..++..+..+.     ++.++++|.+.++|+|++|+|++++
T Consensus       171 ~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~  250 (347)
T 1orr_A          171 AADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYF  250 (347)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHH
Confidence            443         28999999999999997643    24566677776665     6777888999999999999999999


Q ss_pred             HHhcCCCcCCCCEEEecCCC--ccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCC
Q 025270          134 LAVENPEAASSNIFNLVSDR--AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWR  211 (255)
Q Consensus       134 ~~l~~~~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  211 (255)
                      .++++.....|++||++++.  .+|++|+++.+.+.+|.+.++...|....          ......+|++|+++.|||+
T Consensus       251 ~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~d~~k~~~~lG~~  320 (347)
T 1orr_A          251 TALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES----------DQRVFVADIKKITNAIDWS  320 (347)
T ss_dssp             HHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSS----------CCSEECBCCHHHHHHHCCC
T ss_pred             HHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCC----------CcceeecCHHHHHHHHCCC
Confidence            99985322236899999986  49999999999999998877766553221          1245678999999999999


Q ss_pred             ccCChHHHHHHHHHHHHHhc
Q 025270          212 STTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       212 p~~~~~~~i~~~~~~~~~~~  231 (255)
                      |.++++++|+++++|+++..
T Consensus       321 p~~~~~e~l~~~~~~~~~~~  340 (347)
T 1orr_A          321 PKVSAKDGVQKMYDWTSSIL  340 (347)
T ss_dssp             CCSCHHHHHHHHHHHHHHC-
T ss_pred             ccCCHHHHHHHHHHHHHHHH
Confidence            99999999999999998864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=1e-29  Score=209.59  Aligned_cols=201  Identities=15%  Similarity=0.134  Sum_probs=141.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.++ ||||+||.++|+.....+++|+++..|. +.|+.+|...|.         +++++++||+.|
T Consensus        93 n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v  170 (310)
T 1eq2_A           93 NYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV  170 (310)
T ss_dssp             THHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS-SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC-ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcE
Confidence            48899999999999999 9999999999998766688888877654 677766665442         789999999999


Q ss_pred             cCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCc-ceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHH
Q 025270           88 IGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA  161 (255)
Q Consensus        88 ~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~-~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~  161 (255)
                      ||++...     ..+..++..+..+.++.+++++.+ .++|+|++|+|++++.+++++.   +++||+++++.+|++|++
T Consensus       171 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~~e~~  247 (310)
T 1eq2_A          171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVA  247 (310)
T ss_dssp             ESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCBCHHHHH
T ss_pred             ECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCCCccCHHHHH
Confidence            9998652     366778888888888777888888 9999999999999999998765   489999999999999999


Q ss_pred             HHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCC-CccCChHHHHHHHHHHHHHh
Q 025270          162 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW-RSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       162 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~~i~~~~~~~~~~  230 (255)
                      +.+.+.+|.+ ++...+.+...      .........+|++|+++ ||| .|.++++++|+++++|++++
T Consensus       248 ~~i~~~~g~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          248 DATLAYHKKG-QIEYIPFPDKL------KGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             HHC----------------------------CCCSCCBCCHHHHH-TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             HHHHHHcCCC-CceeCCCChhh------hcccccccccchHHHHh-cCCCCCCCCHHHHHHHHHHHHHhc
Confidence            9999999986 33222222110      00112346778999986 999 78899999999999998653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.96  E-value=6.2e-29  Score=208.98  Aligned_cols=212  Identities=17%  Similarity=0.092  Sum_probs=163.3

Q ss_pred             EEecccCcccHHHHHHHHhhCC-cceEEEeccccccCCCCC-CCCCCCCCCCCCCChhHHHHHHHh-----h--------
Q 025270           11 LFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADE-PPHVEGDVVKPDAGHVQVEKYISE-----N--------   75 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~-~~~~E~~~~~~~~~~y~~ek~~~e-----~--------   75 (255)
                      .++.|  +.++.+++++|++.+ +++|||+||.++||.... .+.+|+++..+. +.|+.+|...|     +        
T Consensus       103 ~~~~n--~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~  179 (357)
T 1rkx_A          103 TYSTN--VMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-DPYSNSKGCAELVTSSYRNSFFNPA  179 (357)
T ss_dssp             HHHHH--THHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS-SHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred             HHHHH--HHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC-CccHHHHHHHHHHHHHHHHHHhhhh
Confidence            34444  899999999999886 899999999999987553 467777665543 66776665432     2        


Q ss_pred             -----CCceEEEecCcccCCCCCC--CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC---CCcCCCC
Q 025270           76 -----FSNWASFRPQYMIGSGNNK--DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN---PEAASSN  145 (255)
Q Consensus        76 -----~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~  145 (255)
                           +++++++||+.||||+...  .++..++..+..|..+.+. ++.+.++|+|++|+|++++.++++   .....++
T Consensus       180 ~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~  258 (357)
T 1rkx_A          180 NYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAE  258 (357)
T ss_dssp             GHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCS
T ss_pred             ccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCc
Confidence                 8999999999999998643  3677888888888877665 567889999999999999999874   2112258


Q ss_pred             EEEecCC--CccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHH
Q 025270          146 IFNLVSD--RAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER  223 (255)
Q Consensus       146 ~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~  223 (255)
                      +||++++  +.+|++|+++.+.+.+|.+.++...+...         +.......+|++|+++.|||+|.++++++|+++
T Consensus       259 ~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~  329 (357)
T 1rkx_A          259 GWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---------PHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYI  329 (357)
T ss_dssp             EEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred             eEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCC---------CcCcccccCCHHHHHHHhCCCcCCcHHHHHHHH
Confidence            9999974  58999999999999999876654322111         112356789999999999999999999999999


Q ss_pred             HHHHHHhccccc
Q 025270          224 FEEYVKIGRDKK  235 (255)
Q Consensus       224 ~~~~~~~~~~~~  235 (255)
                      ++|++++.....
T Consensus       330 ~~~~~~~~~~~~  341 (357)
T 1rkx_A          330 VGWHKNWLSGTD  341 (357)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHhcCCc
Confidence            999988754433

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.96  E-value=6.6e-29  Score=209.03  Aligned_cols=215  Identities=15%  Similarity=0.142  Sum_probs=165.1

Q ss_pred             ceEEecccCcccHHHHHHHHhhC--Ccc-------eEEEeccccccCCCCC--C--------CCCCCCCCCCCCChhHHH
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS--GVK-------QFLFISSAGIYKPADE--P--------PHVEGDVVKPDAGHVQVE   69 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~--~v~-------r~i~~Ss~~vy~~~~~--~--------~~~E~~~~~~~~~~y~~e   69 (255)
                      +..++.|  +.++.+++++|.+.  +++       +|||+||.++||....  .        +++|+++..+. +.|+.+
T Consensus        94 ~~~~~~N--v~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~-~~Y~~s  170 (361)
T 1kew_A           94 AAFIETN--IVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPS-SPYSAS  170 (361)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCC-SHHHHH
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCC-CccHHH
Confidence            3344445  89999999999998  887       9999999999986532  1        67888776543 677776


Q ss_pred             HHHHh---------hCCceEEEecCcccCCCCCC-CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           70 KYISE---------NFSNWASFRPQYMIGSGNNK-DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        70 k~~~e---------~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                      |...|         .+++++++||+.|||+.... ..+..++..+..+.++.+++++.+.++++|++|+|++++.++++.
T Consensus       171 K~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  250 (361)
T 1kew_A          171 KASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG  250 (361)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC
Confidence            65543         38999999999999998654 356677888888888888888889999999999999999999865


Q ss_pred             CcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHH
Q 025270          140 EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  219 (255)
Q Consensus       140 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~  219 (255)
                      ..  |++||++++..+|+.|+++.+.+.+|.+.+... | ...........+.......+|++|++++|||+|.++++++
T Consensus       251 ~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~  326 (361)
T 1kew_A          251 KA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-S-YREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESG  326 (361)
T ss_dssp             CT--TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-C-GGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHH
T ss_pred             CC--CCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-c-cccceeecCCCCcccceeecCHHHHHHHhCCCCccCHHHH
Confidence            43  689999999999999999999999986543210 0 0000000000111123467899999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 025270          220 LKERFEEYVKI  230 (255)
Q Consensus       220 i~~~~~~~~~~  230 (255)
                      |+++++|++++
T Consensus       327 l~~~~~~~~~~  337 (361)
T 1kew_A          327 IRKTVEWYLAN  337 (361)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhc
Confidence            99999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.96  E-value=9e-29  Score=208.03  Aligned_cols=200  Identities=16%  Similarity=0.143  Sum_probs=161.7

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.++ +|||+||.++|+.....+++|+++..|. +.|+.+|...|.         +++++++||+.|
T Consensus       140 n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v  217 (357)
T 2x6t_A          140 NYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNV  217 (357)
T ss_dssp             THHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS-SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCC-ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeE
Confidence            48899999999999899 9999999999998766688898877654 677776665442         689999999999


Q ss_pred             cCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCc-ceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHH
Q 025270           88 IGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQ-FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA  161 (255)
Q Consensus        88 ~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~-~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~  161 (255)
                      ||++...     ..+..++..+..+..+.+++++.+ .++|+|++|+|++++.+++++.   +++||+++++.+|+.|++
T Consensus       218 ~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~~~~s~~e~~  294 (357)
T 2x6t_A          218 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVA  294 (357)
T ss_dssp             ESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCEEHHHHH
T ss_pred             ECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEecCCCcccHHHHH
Confidence            9998652     356777888888888777888888 8999999999999999998765   489999999999999999


Q ss_pred             HHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCC-CccCChHHHHHHHHHHHHH
Q 025270          162 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW-RSTTNLPEDLKERFEEYVK  229 (255)
Q Consensus       162 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~~i~~~~~~~~~  229 (255)
                      +.+.+.+|.+ ++...+.+...      .........+|++|+++ ||| .|.++++++|+++++|+++
T Consensus       295 ~~i~~~~g~~-~~~~~~~~~~~------~~~~~~~~~~~~~k~~~-lG~~~~~~~l~e~l~~~~~~~~~  355 (357)
T 2x6t_A          295 DATLAYHKKG-QIEYIPFPDKL------KGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNR  355 (357)
T ss_dssp             HHHHHHHTCC-CCEEECCCGGG------TTSCCSBCCCCCHHHHH-TTCCCCCCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHcCCC-CceecCCCccc------ccccccccccCHHHHHH-cCCCCCCCCHHHHHHHHHHHHhh
Confidence            9999999987 33333322210      00112446778999986 999 7889999999999999865

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=6.9e-29  Score=203.70  Aligned_cols=209  Identities=14%  Similarity=0.101  Sum_probs=163.4

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----hCCceEEEec
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----NFSNWASFRP   84 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----~~~~~~ilRp   84 (255)
                      ..++.|  +.++.+++++|++.++ ||||+||.++|+.....+++|+++..|. +.|+.+|...|     +..+++++||
T Consensus        76 ~~~~~n--~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~ilRp  151 (299)
T 1n2s_A           76 LAQLLN--ATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL-NVYGKTKLAGEKALQDNCPKHLIFRT  151 (299)
T ss_dssp             HHHHHH--THHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS-SHHHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred             HHHHHH--HHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc-cHHHHHHHHHHHHHHHhCCCeEEEee
Confidence            334444  8999999999999988 7999999999998776788998887664 67776665554     4679999999


Q ss_pred             CcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-cC-CCCEEEecCCCccCHHHHHH
Q 025270           85 QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-AA-SSNIFNLVSDRAVTLDGMAK  162 (255)
Q Consensus        85 ~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~-~~~~~~i~~~~~~s~~el~~  162 (255)
                      +.+||++.. .++..++..+..+.++.+++  ++.++++|++|+|++++.+++++. .. .+++||+++++.+|++|+++
T Consensus       152 ~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~  228 (299)
T 1n2s_A          152 SWVYAGKGN-NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAA  228 (299)
T ss_dssp             CSEECSSSC-CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHH
T ss_pred             eeecCCCcC-cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHH
Confidence            999999765 45667777788888776665  478999999999999999998762 11 25899999999999999999


Q ss_pred             HHHHHhCCCC------eeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          163 LCAQAAGLPV------EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       163 ~i~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+.+.+|.+.      .+...+.....     ..........+|++|++++|||+|. +++++|+++++|++++.
T Consensus       229 ~i~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~  297 (299)
T 1n2s_A          229 LVFDEARKAGITLALTELNAVPTSAYP-----TPASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTT  297 (299)
T ss_dssp             HHHHHHHHHTCCCCCCEEEEECSTTSC-----CSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCC
T ss_pred             HHHHHhCCCcccccccccccccccccc-----CcCCCCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Confidence            9999998762      33333321110     0011235678999999999999997 89999999999998754

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=1.9e-28  Score=200.41  Aligned_cols=201  Identities=14%  Similarity=0.106  Sum_probs=161.8

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----hCCceEEEecC
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----NFSNWASFRPQ   85 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----~~~~~~ilRp~   85 (255)
                      .++.|  +.++.+++++|++.++ ||||+||.++|+.....+++|+++..+. +.|+.+|...|     ++.+++++||+
T Consensus        86 ~~~~n--v~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~~~lR~~  161 (292)
T 1vl0_A           86 AYKIN--AIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ-SAYGKTKLEGENFVKALNPKYYIVRTA  161 (292)
T ss_dssp             HHHHH--THHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             HHHHH--HHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCc-cHHHHHHHHHHHHHHhhCCCeEEEeee
Confidence            34444  8899999999999888 9999999999998766788998887654 66776665544     47799999999


Q ss_pred             cccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHH
Q 025270           86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA  165 (255)
Q Consensus        86 ~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~  165 (255)
                      .|||+ . ..++..++..+..+..+.+.+  ++.++++|++|+|++++.+++++ .  +++||+++++.+|+.|+++.+.
T Consensus       162 ~v~G~-~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~--~~~~~i~~~~~~s~~e~~~~i~  234 (292)
T 1vl0_A          162 WLYGD-G-NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-N--YGTFHCTCKGICSWYDFAVEIF  234 (292)
T ss_dssp             SEESS-S-SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-C--CEEEECCCBSCEEHHHHHHHHH
T ss_pred             eeeCC-C-cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-C--CcEEEecCCCCccHHHHHHHHH
Confidence            99999 3 345666777777787766664  47889999999999999999876 2  6999999999999999999999


Q ss_pred             HHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          166 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      +.+|.+.++...+......     .........+|++|++++|||+|. +++++|+++++||+
T Consensus       235 ~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~  291 (292)
T 1vl0_A          235 RLTGIDVKVTPCTTEEFPR-----PAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  291 (292)
T ss_dssp             HHHCCCCEEEEECSTTSCC-----SSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             HHhCCCCceeeccccccCc-----ccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhc
Confidence            9999887776555432210     011124577899999999999998 99999999999985

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=6.6e-28  Score=203.70  Aligned_cols=219  Identities=13%  Similarity=0.148  Sum_probs=166.6

Q ss_pred             EEecccCcccHHHHHHHHhhCCc---ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCc
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSN   78 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v---~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~   78 (255)
                      .++.|  +.++.+++++|++.++   ++||++||.++|+.....+++|+++..+. +.|+.+|...|         ++++
T Consensus       101 ~~~~n--~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~  177 (372)
T 1db3_A          101 TADVD--AMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPYAVAKLYAYWITVNYRESYGMY  177 (372)
T ss_dssp             HHHHH--THHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHH--HHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCC-ChHHHHHHHHHHHHHHHHHHhCCC
Confidence            34445  8899999999999988   79999999999998766688888877653 77887776544         3899


Q ss_pred             eEEEecCcccCCCCCCCc----HHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           79 WASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      ++++|++++|||+.....    +..++..+..|.. ...++++++.++|+|++|+|++++.+++++.   +++||+++++
T Consensus       178 ~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~~  254 (372)
T 1db3_A          178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ---PEDFVIATGV  254 (372)
T ss_dssp             EEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS---CCCEEECCCC
T ss_pred             eEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC---CceEEEcCCC
Confidence            999999999999765433    3445566666764 4456888999999999999999999998764   3899999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeee--cCCC---------c----------ccccccccCCcCCCceeeCHHHHHHhcCCCc
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVH--YDPK---------A----------AGIDAKKAFPFRNMHFYAEPRAAKDILGWRS  212 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~--~~~~---------~----------~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  212 (255)
                      .+|++|+++.+.+.+|.+.++..  .|..         .          .........+.......+|++|++++|||+|
T Consensus       255 ~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  334 (372)
T 1db3_A          255 QYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKP  334 (372)
T ss_dssp             CEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCC
T ss_pred             ceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHhCCcc
Confidence            99999999999999997654321  1110         0          0000000112223456789999999999999


Q ss_pred             cCChHHHHHHHHHHHHHhccccc
Q 025270          213 TTNLPEDLKERFEEYVKIGRDKK  235 (255)
Q Consensus       213 ~~~~~~~i~~~~~~~~~~~~~~~  235 (255)
                      .++++++|+++++|+++......
T Consensus       335 ~~~l~e~l~~~~~~~~~~~~~~~  357 (372)
T 1db3_A          335 EITLREMVSEMVANDLEAAKKHS  357 (372)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCHHHHHHHHHHHHHHhhhccc
Confidence            99999999999999988764433

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.96  E-value=8.4e-28  Score=205.21  Aligned_cols=207  Identities=16%  Similarity=0.153  Sum_probs=163.9

Q ss_pred             EEecccCcccHHHHHHHHhhCCc-ceEEEeccccccCCCCCCCCCCC--------------CCCCCCCChhHHHHHHHh-
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEG--------------DVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~--------------~~~~~~~~~y~~ek~~~e-   74 (255)
                      .++.|  +.++.+++++|++.++ ++||++||.++|+... .+++|+              .+..+ .+.|+.+|+..| 
T Consensus       126 ~~~~N--v~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~~~e~  201 (404)
T 1i24_A          126 TQHNN--VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQA-SSFYHLSKVHDSH  201 (404)
T ss_dssp             HHHHH--HHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEETTEEEEEECCCCC-CSHHHHHHHHHHH
T ss_pred             hHHHH--HHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCccccccccccccccccCCCCC-CChhHHHHHHHHH
Confidence            34455  9999999999999887 5999999999998754 356664              23333 367777766543 


Q ss_pred             --------hCCceEEEecCcccCCCCC------------------CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHH
Q 025270           75 --------NFSNWASFRPQYMIGSGNN------------------KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDL  128 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~------------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~  128 (255)
                              ++++++++||+.||||+..                  ...+..++..+..|.++.+++++.+.++|||++|+
T Consensus       202 ~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv  281 (404)
T 1i24_A          202 NIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDT  281 (404)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             HHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHH
Confidence                    2899999999999999764                  23567888888889888888888999999999999


Q ss_pred             HHHHHHHhcCCCcCCC--CEEEecCCCccCHHHHHHHHHHH---hCCCCeeeecCCCcccccccccCCcCCCceeeCHHH
Q 025270          129 SSMLTLAVENPEAASS--NIFNLVSDRAVTLDGMAKLCAQA---AGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRA  203 (255)
Q Consensus       129 a~~~~~~l~~~~~~~~--~~~~i~~~~~~s~~el~~~i~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  203 (255)
                      |++++.+++++... |  ++||+++ +.+|++|+++.+++.   +|.+.++...|......        ......+|++|
T Consensus       282 a~a~~~~l~~~~~~-g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~p~~~~~~--------~~~~~~~d~~k  351 (404)
T 1i24_A          282 VQCVEIAIANPAKA-GEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEA--------EEHYYNAKHTK  351 (404)
T ss_dssp             HHHHHHHHHSCCCT-TCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSC--------SSCCCCBCCCH
T ss_pred             HHHHHHHHhCcccC-CCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCccccccCcccCcc--------ccceEecCHHH
Confidence            99999999876532 3  6999998 789999999999998   78877766555432210        11346679999


Q ss_pred             HHHhcCCCccCChHHHHHHHHHHHHHhcc
Q 025270          204 AKDILGWRSTTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       204 ~~~~lG~~p~~~~~~~i~~~~~~~~~~~~  232 (255)
                      ++ +|||+|.++++++++++++|++....
T Consensus       352 ~~-~LG~~p~~~~~~~l~~~~~~~~~~~~  379 (404)
T 1i24_A          352 LM-ELGLEPHYLSDSLLDSLLNFAVQFKD  379 (404)
T ss_dssp             HH-HTTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred             HH-HcCCCcCcCHHHHHHHHHHHHHhhhh
Confidence            98 69999999999999999999987653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.96  E-value=2.4e-28  Score=204.05  Aligned_cols=213  Identities=15%  Similarity=0.130  Sum_probs=163.5

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCC--CCCCCCCCCCCC---CChhHHHHHHHhh--------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE--PPHVEGDVVKPD---AGHVQVEKYISEN--------   75 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~--~~~~E~~~~~~~---~~~y~~ek~~~e~--------   75 (255)
                      +..++.|  +.++.+++++|++.+++||||+||.++|+....  .+ +|+++..|.   .+.|+.+|+..|.        
T Consensus        96 ~~~~~~n--~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~  172 (342)
T 2x4g_A           96 QEEVASA--LGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQARN  172 (342)
T ss_dssp             -CHHHHH--HHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH--HHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHHhhc
Confidence            3344445  899999999999999999999999999987544  44 788777651   3667766654432        


Q ss_pred             CCceEEEecCcccCCCC-CCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           76 FSNWASFRPQYMIGSGN-NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      +++++++||+.+||+.. ... +..++..+..|..+.+   +++.++++|++|+|++++.+++++..  |++||+++++ 
T Consensus       173 g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~-  245 (342)
T 2x4g_A          173 GLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI--GERYLLTGHN-  245 (342)
T ss_dssp             TCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT--TCEEEECCEE-
T ss_pred             CCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC--CceEEEcCCc-
Confidence            79999999999999976 423 5567777777776554   56789999999999999999987664  6899999999 


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcc--------------cccc--c-ccCCcCCCceeeCHHHHHHhcCC-CccCCh
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAA--------------GIDA--K-KAFPFRNMHFYAEPRAAKDILGW-RSTTNL  216 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~--------------~~~~--~-~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~  216 (255)
                      +|+.|+++.+.+.+|.+.++ ..|....              +...  . ...........+|++|++++||| .| +++
T Consensus       246 ~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~  323 (342)
T 2x4g_A          246 LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFST-TAL  323 (342)
T ss_dssp             EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCC-SCH
T ss_pred             ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCH
Confidence            99999999999999998776 5554311              0000  0 00111124677899999999999 99 899


Q ss_pred             HHHHHHHHHHHHHhccc
Q 025270          217 PEDLKERFEEYVKIGRD  233 (255)
Q Consensus       217 ~~~i~~~~~~~~~~~~~  233 (255)
                      +++|+++++|+++++..
T Consensus       324 ~~~l~~~~~~~~~~g~~  340 (342)
T 2x4g_A          324 DDTLLRAIDWFRDNGYF  340 (342)
T ss_dssp             HHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHcCCC
Confidence            99999999999988754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=7.7e-28  Score=203.63  Aligned_cols=216  Identities=14%  Similarity=0.079  Sum_probs=165.4

Q ss_pred             EEecccCcccHHHHHHHHhhCCc---ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCc
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSN   78 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v---~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~   78 (255)
                      .++.|  +.++.+++++|++.++   ++|||+||.++|+.....+++|+++..+. +.|+.+|...|         ++++
T Consensus       125 ~~~~N--~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~  201 (375)
T 1t2a_A          125 TADVD--GVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR-SPYGAAKLYAYWIVVNFREAYNLF  201 (375)
T ss_dssp             HHHHH--THHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             HHHHH--HHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCC-ChhHHHHHHHHHHHHHHHHHhCCC
Confidence            34444  8999999999999988   89999999999997766788898877654 67887776544         3899


Q ss_pred             eEEEecCcccCCCCCCCc----HHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           79 WASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      ++++||+.+|||+....+    +..++..+..|.. ...++++++.++|+|++|+|++++.+++++.   +++||+++++
T Consensus       202 ~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~ni~~~~  278 (375)
T 1t2a_A          202 AVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE---PEDFVIATGE  278 (375)
T ss_dssp             EEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS---CCCEEECCSC
T ss_pred             EEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC---CceEEEeCCC
Confidence            999999999999765443    3445556666753 3456788899999999999999999998765   3889999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeee--cCCCcc---------cccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHH
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVH--YDPKAA---------GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  222 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~  222 (255)
                      .+|++|+++.+.+.+|.+.++..  +|....         ........+.......+|++|++++|||+|.++++++|++
T Consensus       279 ~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~  358 (375)
T 1t2a_A          279 VHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVRE  358 (375)
T ss_dssp             CEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHH
Confidence            99999999999999998755321  111100         0000001122234567899999999999999999999999


Q ss_pred             HHHHHHHhcc
Q 025270          223 RFEEYVKIGR  232 (255)
Q Consensus       223 ~~~~~~~~~~  232 (255)
                      +++|+++...
T Consensus       359 ~~~~~~~~~~  368 (375)
T 1t2a_A          359 MVHADVELMR  368 (375)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhhc
Confidence            9999988754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.96  E-value=2e-28  Score=202.01  Aligned_cols=202  Identities=14%  Similarity=0.105  Sum_probs=152.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCC-CCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~-~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.+++||||+||.++|+... ..+.+|+.+..|. +.|+.+|...|         ++++++++||+.
T Consensus        94 n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~  172 (312)
T 2yy7_A           94 NMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS-TVYGISKQAGERWCEYYHNIYGVDVRSIRYPG  172 (312)
T ss_dssp             HHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEECEEECE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC-chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCe
Confidence            388999999999999999999999999998743 2467777766553 67776665443         389999999999


Q ss_pred             ccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC--CCCEEEecCCCccCHHH
Q 025270           87 MIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA--SSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        87 v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~--~~~~~~i~~~~~~s~~e  159 (255)
                      +||+...+.     .+...+.....+..+.+++++++.++|+|++|+|++++.+++++...  .+++||+++ +.+|++|
T Consensus       173 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e  251 (312)
T 2yy7_A          173 LISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTE  251 (312)
T ss_dssp             EECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHH
T ss_pred             EecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHH
Confidence            999754321     22333344445555667778889999999999999999999977542  248999996 7899999


Q ss_pred             HHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      +++.+.+.+| ..++...+.....       ........+|++|++++|||+|.++++++|+++++|++
T Consensus       252 ~~~~i~~~~~-~~~i~~~~~~~~~-------~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          252 IANEIKKHIP-EFTITYEPDFRQK-------IADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             HHHHHHTTCT-TCEEEECCCTHHH-------HHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHCC-CCceEeccCcccc-------ccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence            9999999998 3444333321100       00113457899999999999999999999999999974

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.96  E-value=1.6e-27  Score=194.40  Aligned_cols=207  Identities=17%  Similarity=0.185  Sum_probs=160.0

Q ss_pred             cccceEEecc-c---CcccHHHHHHHHhh--CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHH-----HHh
Q 025270            6 AKFKALFRTN-N---NFRLQRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-----ISE   74 (255)
Q Consensus         6 ~~~d~~~~~~-~---n~~~~~~ll~aa~~--~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~-----~~e   74 (255)
                      ...|.++++. .   ....+.+++++|++  .+++||||+||.++|+.....+++|+++..|. +.|+..|+     +.+
T Consensus        62 ~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~  140 (286)
T 3ius_A           62 DGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT-AARGRWRVMAEQQWQA  140 (286)
T ss_dssp             TTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC-SHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC-CHHHHHHHHHHHHHHh
Confidence            3467777776 1   12347899999998  68999999999999998877788999888765 66665554     455


Q ss_pred             h-CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           75 N-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        75 ~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      + +++++++||+++||++...      +..+..|....+.++ ++.++|+|++|+|++++.+++++..  +++||+++++
T Consensus       141 ~~~~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~  211 (286)
T 3ius_A          141 VPNLPLHVFRLAGIYGPGRGP------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDP--GAVYNVCDDE  211 (286)
T ss_dssp             STTCCEEEEEECEEEBTTBSS------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCT--TCEEEECCSC
T ss_pred             hcCCCEEEEeccceECCCchH------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCC--CCEEEEeCCC
Confidence            5 8999999999999997554      344556776666654 5789999999999999999998874  6899999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeee-cCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHHHHHHHHH
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFE  225 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i~~~~~  225 (255)
                      .+|+.|+++.+++.+|.+.+... ......+..   ...+......+|++|+++.|||+|.+ +++++|+++++
T Consensus       212 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~  282 (286)
T 3ius_A          212 PVPPQDVIAYAAELQGLPLPPAVDFDKADLTPM---ARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQA  282 (286)
T ss_dssp             CBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHH---HHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHcCCCCCcccchhhhccChh---HHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence            99999999999999998765432 111111100   00011256789999999999999999 79999999986

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.95  E-value=1.3e-27  Score=198.91  Aligned_cols=199  Identities=15%  Similarity=0.144  Sum_probs=157.5

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCC--CCCCCCCCCCCCChhHHHHHHHh-----hCCceEEEecCcccCC
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHVQVEKYISE-----NFSNWASFRPQYMIGS   90 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~--~~~E~~~~~~~~~~y~~ek~~~e-----~~~~~~ilRp~~v~G~   90 (255)
                      +.++.+++++|.+.++++||++||.++|+.....  +++|++  .+ .+.|+.+|...|     ++++++++||+++|||
T Consensus       113 ~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~-~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp  189 (330)
T 2pzm_A          113 VQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--AP-FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGP  189 (330)
T ss_dssp             THHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CC-CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CC-CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECc
Confidence            8999999999999899999999999999875443  777776  22 356766665544     4889999999999999


Q ss_pred             CCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHH-HHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhC
Q 025270           91 GNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS-MLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAG  169 (255)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~-~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g  169 (255)
                      +.....+..++..+..+.  .+++++. .++++|++|+|+ +++.+++++.   +++||++++..+|++|+++.+.+.+|
T Consensus       190 ~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g  263 (330)
T 2pzm_A          190 RLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP---TGVFNVSTGEGHSIKEVFDVVLDYVG  263 (330)
T ss_dssp             TCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC---CEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC---CCEEEeCCCCCCCHHHHHHHHHHHhC
Confidence            874446666777777765  4555666 889999999999 9999998754   58999999999999999999999999


Q ss_pred             CCCeeeecCCCcccccccccCCcCCCceeeCHHHH-----HHhcCCCccCChHHHHHHHHHHHHHhcccccccc
Q 025270          170 LPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA-----KDILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQ  238 (255)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~~~~~  238 (255)
                      .+ ++...+...           ......+|++|+     ++ |||+|.++++++|+++++|+++.+......+
T Consensus       264 ~~-~~~~~~~~~-----------~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~~~~~~~~~~~~~~  324 (330)
T 2pzm_A          264 AT-LAEPVPVVA-----------PGADDVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLAWYDKYGVTDIFSH  324 (330)
T ss_dssp             CC-CSSCCCEEC-----------CCTTSCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHCSCSCCCS
T ss_pred             CC-CceeCCCCc-----------chhhccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHHHHHhhCcccccCc
Confidence            87 443322221           124456677777     87 9999999999999999999999876654433

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.95  E-value=7.2e-27  Score=195.20  Aligned_cols=219  Identities=15%  Similarity=0.113  Sum_probs=164.4

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~   77 (255)
                      ++..++.|  +.++.+++++|++.++ ++|||+||.++||.....+++|+.+..+. +.|+.+|...|         +++
T Consensus        95 ~~~~~~~N--v~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~  171 (345)
T 2z1m_A           95 PILTAEVD--AIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR-SPYAVAKLFGHWITVNYREAYNM  171 (345)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC-ChhHHHHHHHHHHHHHHHHHhCC
Confidence            34444555  8999999999998887 89999999999998776778888776653 67777666544         278


Q ss_pred             ceEEEecCcccCCCCCCCcH----HHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC
Q 025270           78 NWASFRPQYMIGSGNNKDCE----EWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD  152 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~  152 (255)
                      +++++|++++|||+......    ..++..+..|.. ....+++.+.++++|++|+|++++.+++++.   +++||++++
T Consensus       172 ~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~~~~i~~~  248 (345)
T 2z1m_A          172 FACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE---PDDYVIATG  248 (345)
T ss_dssp             CEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS---CCCEEECCS
T ss_pred             ceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC---CceEEEeCC
Confidence            99999999999998654332    334555556653 3356777888999999999999999998765   379999999


Q ss_pred             CccCHHHHHHHHHHHhCCCCeeee--cCCCcc---------cccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHH
Q 025270          153 RAVTLDGMAKLCAQAAGLPVEIVH--YDPKAA---------GIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK  221 (255)
Q Consensus       153 ~~~s~~el~~~i~~~~g~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~  221 (255)
                      +.+|++|+++.+.+.+|.+.++..  .|....         ........+.......+|++|++++|||+|.++++++|+
T Consensus       249 ~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~  328 (345)
T 2z1m_A          249 ETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVE  328 (345)
T ss_dssp             CCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHH
T ss_pred             CCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHHHHH
Confidence            999999999999999998755321  111100         000000112223456779999999999999999999999


Q ss_pred             HHHHHHHHhcc
Q 025270          222 ERFEEYVKIGR  232 (255)
Q Consensus       222 ~~~~~~~~~~~  232 (255)
                      ++++|++++..
T Consensus       329 ~~~~~~~~~~~  339 (345)
T 2z1m_A          329 IMMEADLKRVR  339 (345)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999988754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.95  E-value=1.1e-26  Score=192.20  Aligned_cols=206  Identities=14%  Similarity=0.060  Sum_probs=154.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCC-CCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~-~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.++++|||+||.++|+... ..+..|+++..|. +.|+.+|+..|         ++++++++||+.
T Consensus        88 n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~  166 (317)
T 3ajr_A           88 NMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR-TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG  166 (317)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECE
T ss_pred             hhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC-chHHHHHHHHHHHHHHHHHhcCCeEEEEecCc
Confidence            388999999999999999999999999998643 3456677666553 67777665543         389999999999


Q ss_pred             ccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC--CCCEEEecCCCccCHHH
Q 025270           87 MIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA--SSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        87 v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~--~~~~~~i~~~~~~s~~e  159 (255)
                      +||+...+     ......+.....+..+.+++++++.++|+|++|+|++++.+++++...  .+++||+++ ..+|++|
T Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e  245 (317)
T 3ajr_A          167 IISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSE  245 (317)
T ss_dssp             EECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHH
T ss_pred             EeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC-ccccHHH
Confidence            99975322     122233344455555666777888999999999999999999876531  248999996 5799999


Q ss_pred             HHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhcc
Q 025270          160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~  232 (255)
                      +++.+.+.+|. .++...+.....       ........+|++|++++|||+|.++++++|+++++|++++..
T Consensus       246 ~~~~i~~~~~~-~~i~~~~~~~~~-------~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  310 (317)
T 3ajr_A          246 LYSKIKERIPE-FEIEYKEDFRDK-------IAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLG  310 (317)
T ss_dssp             HHHHHHTTCCS-CCEEECCCHHHH-------HHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHCCc-cccccccccchh-------hccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhc
Confidence            99999999883 333332221000       001134568999999999999999999999999999988654

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.95  E-value=6.7e-27  Score=194.86  Aligned_cols=201  Identities=17%  Similarity=0.198  Sum_probs=155.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccC----CCCCCCCCCCCCCCCCCChhHHHHHHHh------hCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYK----PADEPPHVEGDVVKPDAGHVQVEKYISE------NFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~----~~~~~~~~E~~~~~~~~~~y~~ek~~~e------~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|.+.++++||++||.++|+    .... +++|++  .|..+.|+.+|...|      .. +++++||++
T Consensus       113 N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~  188 (333)
T 2q1w_A          113 NCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYLEYSGL-DFVTFRLAN  188 (333)
T ss_dssp             HTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHHHHHTC-CEEEEEESE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHHHhhhC-CeEEEeece
Confidence            389999999999999999999999999998    5444 777776  222156666665444      33 899999999


Q ss_pred             ccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        87 v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      +|||+.....++.++..+..+.  .+++ +...++++|++|+|++++.+++++.   +++||++++..+|++|+++.+.+
T Consensus       189 v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~~~~~~s~~e~~~~i~~  262 (333)
T 2q1w_A          189 VVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG---HGAYHFSSGTDVAIKELYDAVVE  262 (333)
T ss_dssp             EESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC---CEEEECSCSCCEEHHHHHHHHHH
T ss_pred             EECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeCCCCCccHHHHHHHHHH
Confidence            9999844446677777777776  4455 6778999999999999999998765   58999999999999999999999


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhccccc
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIGRDKK  235 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~~~  235 (255)
                      .+|.+ ++...+... .     ..........+|++|+++. ||+|.++++++|+++++|+++.+..+.
T Consensus       263 ~~g~~-~~~~~~~~~-~-----~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~~~~~  323 (333)
T 2q1w_A          263 AMALP-SYPEPEIRE-L-----GPDDAPSILLDPSRTIQDF-GKIEFTPLKETVAAAVAYFREYGVSGG  323 (333)
T ss_dssp             HTTCS-SCCCCEEEE-C-----CTTSCCCCCBCCHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHCC---
T ss_pred             HhCCC-CceeCCCCC-c-----ccccccccccCCHHHHHhc-CCCcCCCHHHHHHHHHHHHHHHCCCCC
Confidence            99987 443322221 0     0111125678899999988 999999999999999999998875443

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.95  E-value=5.7e-27  Score=193.70  Aligned_cols=210  Identities=19%  Similarity=0.181  Sum_probs=156.1

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----hhCCceEE
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----ENFSNWAS   81 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----e~~~~~~i   81 (255)
                      .++..++.|  +.++.+++++|.+.++ +|||+||.++|+. ...+++|+++..+. +.|+.+|...     ++++++++
T Consensus        79 ~~~~~~~~n--~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~  153 (315)
T 2ydy_A           79 QPDAASQLN--VDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPL-NLYGKTKLDGEKAVLENNLGAAV  153 (315)
T ss_dssp             -----------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCC-SHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CHHHHHHHH--HHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCc-CHHHHHHHHHHHHHHHhCCCeEE
Confidence            455566666  9999999999999887 8999999999987 45678888876653 6676666554     45889999


Q ss_pred             EecCcccCCCCCC--CcHHHHHHHHH-cCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC--CcCCCCEEEecCCCccC
Q 025270           82 FRPQYMIGSGNNK--DCEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP--EAASSNIFNLVSDRAVT  156 (255)
Q Consensus        82 lRp~~v~G~~~~~--~~~~~~~~~~~-~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~~~~~~~~~i~~~~~~s  156 (255)
                      +||+.|||+....  .++..++..+. .+..+.+.  +.+.++++|++|+|++++.+++++  ....+++||+++++.+|
T Consensus       154 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          154 LRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             EEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC
T ss_pred             EeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCccc
Confidence            9999999997763  34555666666 67666554  467789999999999999998753  11125899999999999


Q ss_pred             HHHHHHHHHHHhCCCCe-eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          157 LDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       157 ~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      +.|+++.+.+.+|.+.+ +...+....      ..........+|++|++++ ||.|.++++++|+++++|++++
T Consensus       232 ~~e~~~~i~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          232 KYEMACAIADAFNLPSSHLRPITDSPV------LGAQRPRNAQLDCSKLETL-GIGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             HHHHHHHHHHHTTCCCTTEEEECSCCC------SSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHHHHHHGGGCC-
T ss_pred             HHHHHHHHHHHhCCChhheeccccccc------cccCCCcccccchHHHHhc-CCCCCCCHHHHHHHHHHHHccc
Confidence            99999999999998765 433333000      0011224677899999987 9999999999999999998765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.95  E-value=7.3e-27  Score=198.01  Aligned_cols=209  Identities=11%  Similarity=0.108  Sum_probs=162.3

Q ss_pred             EEecccCcccHHHHHHHHhhCCcc-----eEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hC
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NF   76 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~-----r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~   76 (255)
                      .++.|  +.++.+++++|++.+++     +|||+||.++||.... +++|+++..+. +.|+.+|+..|         ++
T Consensus       129 ~~~~n--v~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          129 TADVV--ATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPR-SPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             HHHHH--THHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHH--HHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCC-CchHHHHHHHHHHHHHHHHHhC
Confidence            33444  88999999999998877     9999999999998666 88888877654 67877776544         27


Q ss_pred             CceEEEecCcccCCCCCCCc----HHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           77 SNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      ++++++|++++|||+....+    +..++..+..|.. ...++++.+.++|+|++|+|++++.+++++.   +++||+++
T Consensus       205 ~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~i~~  281 (381)
T 1n7h_A          205 LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK---PDDYVVAT  281 (381)
T ss_dssp             CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS---CCEEEECC
T ss_pred             CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC---CCeEEeeC
Confidence            89999999999999865443    3345556666754 3346778899999999999999999998765   38999999


Q ss_pred             CCccCHHHHHHHHHHHhCCCCee-eecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          152 DRAVTLDGMAKLCAQAAGLPVEI-VHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       152 ~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      ++.+|++|+++.+.+.+|.+... ....+..       ..+.......+|++|++++|||+|.++++++|+++++||.+.
T Consensus       282 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          282 EEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             SCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHcCCCcccccccCccc-------CCccccccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence            99999999999999999986421 1111110       011122456779999999999999999999999999999887


Q ss_pred             ccc
Q 025270          231 GRD  233 (255)
Q Consensus       231 ~~~  233 (255)
                      ...
T Consensus       355 ~~~  357 (381)
T 1n7h_A          355 AKR  357 (381)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            533

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.94  E-value=9.4e-27  Score=210.28  Aligned_cols=215  Identities=15%  Similarity=0.207  Sum_probs=164.0

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCC------CCCCChhHHHHHHHh---------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------KPDAGHVQVEKYISE---------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~------~~~~~~y~~ek~~~e---------~~~~~~i   81 (255)
                      |+.++.+++++|++.+ +||||+||.++|+.....+++|+++.      ..+.+.|+.+|...|         .++++++
T Consensus       409 Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~i  487 (660)
T 1z7e_A          409 DFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL  487 (660)
T ss_dssp             HTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             hhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            3889999999999988 89999999999998766677887652      122245666555433         3899999


Q ss_pred             EecCcccCCCCCC---------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           82 FRPQYMIGSGNNK---------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        82 lRp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                      +||++|||++...         ..+..++..+..|.++.+++++.+.++|+|++|+|++++.+++++.. ..+++||+++
T Consensus       488 lRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~  567 (660)
T 1z7e_A          488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN  567 (660)
T ss_dssp             EEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             ECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECC
Confidence            9999999998642         35677888888898888888888999999999999999999987642 2368999999


Q ss_pred             CC-ccCHHHHHHHHHHHhCCCCeeeecCCCccc--cccc---ccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          152 DR-AVTLDGMAKLCAQAAGLPVEIVHYDPKAAG--IDAK---KAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       152 ~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      ++ .+|+.|+++.+.+.+|.+......|.....  ....   ...........+|++|++++|||+|.++++++|+++++
T Consensus       568 ~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~  647 (660)
T 1z7e_A          568 PENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLD  647 (660)
T ss_dssp             GGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHH
Confidence            86 899999999999999875433223322100  0000   00001124567899999999999999999999999999


Q ss_pred             HHHHhcc
Q 025270          226 EYVKIGR  232 (255)
Q Consensus       226 ~~~~~~~  232 (255)
                      |++++..
T Consensus       648 ~~~~~~~  654 (660)
T 1z7e_A          648 FFLRTVD  654 (660)
T ss_dssp             HHHTTSC
T ss_pred             HHHhhcc
Confidence            9988754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.94  E-value=1.9e-26  Score=194.14  Aligned_cols=215  Identities=15%  Similarity=0.177  Sum_probs=158.6

Q ss_pred             CcccHHHHHHHHhhC--CcceEE-------EeccccccCCC--CCCCCCCCCCCCCCCC-hhHHHHHHHhh----C-Cce
Q 025270           17 NFRLQRPVADWAKSS--GVKQFL-------FISSAGIYKPA--DEPPHVEGDVVKPDAG-HVQVEKYISEN----F-SNW   79 (255)
Q Consensus        17 n~~~~~~ll~aa~~~--~v~r~i-------~~Ss~~vy~~~--~~~~~~E~~~~~~~~~-~y~~ek~~~e~----~-~~~   79 (255)
                      |+.++.+++++|++.  ++++||       |+||.++||..  ...+++|+++..+..+ .|.+|+++.++    + +++
T Consensus        94 n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~  173 (364)
T 2v6g_A           94 NSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTW  173 (364)
T ss_dssp             HHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEE
T ss_pred             hHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhHHHHHHHHHHhhcCCCceE
Confidence            489999999999998  899998       89999999874  3457888877654223 35677777653    5 999


Q ss_pred             EEEecCcccCCCCCCC---cHHHH-HHHH--HcCCCeeccCCCC---cceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           80 ASFRPQYMIGSGNNKD---CEEWF-FDRI--VRKRPVPIPGSGM---QFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~---~~~~~-~~~~--~~~~~~~i~~~~~---~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      +++||+.|||++....   ..+.+ +..+  ..|.++.++++++   ...+++|++|+|++++.+++++... |++||++
T Consensus       174 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~-g~~~ni~  252 (364)
T 2v6g_A          174 SVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAK-NEAFNVS  252 (364)
T ss_dssp             EEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGT-TEEEEEC
T ss_pred             EEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCCC-CceEEec
Confidence            9999999999976532   23332 3334  2677777777773   4578899999999999999876533 5799999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCeee--ecCCCcccccc-----------c-ccCCc---C-----------CCc-eeeCH
Q 025270          151 SDRAVTLDGMAKLCAQAAGLPVEIV--HYDPKAAGIDA-----------K-KAFPF---R-----------NMH-FYAEP  201 (255)
Q Consensus       151 ~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~-----------~-~~~~~---~-----------~~~-~~~d~  201 (255)
                      +++.+|++|+++.+++.+|.+....  ..|........           . ...+.   .           ... ..+|+
T Consensus       253 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  332 (364)
T 2v6g_A          253 NGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSM  332 (364)
T ss_dssp             CSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCC
T ss_pred             CCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcch
Confidence            9999999999999999999876543  33322100000           0 00000   0           134 57899


Q ss_pred             HHHHHhcCCCccCChHHHHHHHHHHHHHhccc
Q 025270          202 RAAKDILGWRSTTNLPEDLKERFEEYVKIGRD  233 (255)
Q Consensus       202 ~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~  233 (255)
                      +|+++ |||+|.++++++|+++++|+++.+..
T Consensus       333 ~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g~l  363 (364)
T 2v6g_A          333 NKSKE-HGFLGFRNSKNAFISWIDKAKAYKIV  363 (364)
T ss_dssp             HHHHH-TTCCCCCCHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHh-cCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence            99997 99999999999999999999987653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.94  E-value=4.9e-26  Score=206.99  Aligned_cols=203  Identities=21%  Similarity=0.233  Sum_probs=151.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCC----CCCCCCCCCCCCCCChhHHHHHHHh-----------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPDAGHVQVEKYISE-----------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~----~~~~~E~~~~~~~~~~y~~ek~~~e-----------~~~~~~i   81 (255)
                      |+.++.+++++|++.+++|||++||.++|+...    ..+++|+++..+. +.|+.+|...|           .++++++
T Consensus       111 Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~g~~~~i  189 (699)
T 1z45_A          111 NILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-NPYGHTKYAIENILNDLYNSDKKSWKFAI  189 (699)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCC-ChHHHHHHHHHHHHHHHHHhccCCCcEEE
Confidence            388999999999998999999999999998632    2467777766553 56666554432           4789999


Q ss_pred             EecCcccCCCCCC-----------CcHHHHHHHHHcC--CCeeccC------CCCcceeeeeHHHHHHHHHHHhcCCC--
Q 025270           82 FRPQYMIGSGNNK-----------DCEEWFFDRIVRK--RPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPE--  140 (255)
Q Consensus        82 lRp~~v~G~~~~~-----------~~~~~~~~~~~~~--~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~--  140 (255)
                      +||+++||+....           .++. ++..+..+  .++.+++      ++.+.++|||++|+|++++.+++...  
T Consensus       190 lR~~~vyG~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~  268 (699)
T 1z45_A          190 LRYFNPIGAHPSGLIGEDPLGIPNNLLP-YMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAY  268 (699)
T ss_dssp             EEECEEECCCTTSSCCCCCSSSCCSHHH-HHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHS
T ss_pred             EEeccccCCCcccccccccccchhHHHH-HHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhcc
Confidence            9999999985321           1233 33344433  4566666      57889999999999999999987421  


Q ss_pred             ---cCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChH
Q 025270          141 ---AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP  217 (255)
Q Consensus       141 ---~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~  217 (255)
                         ...+++||+++++.+|++|+++.+++.+|.+.++...+....          ......+|++|++++|||+|.++++
T Consensus       269 ~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~----------~~~~~~~d~~ka~~~LG~~p~~~l~  338 (699)
T 1z45_A          269 NENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAG----------DVLNLTAKPDRAKRELKWQTELQVE  338 (699)
T ss_dssp             CTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------------------CCCCCBCCHHHHHHTCCCCCCCHH
T ss_pred             ccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCC----------ccccccCCHHHHHHhcCCCCCCCHH
Confidence               111379999999999999999999999998766543332111          1245778999999999999999999


Q ss_pred             HHHHHHHHHHHHhc
Q 025270          218 EDLKERFEEYVKIG  231 (255)
Q Consensus       218 ~~i~~~~~~~~~~~  231 (255)
                      ++|+++++|++++.
T Consensus       339 egl~~~~~w~~~~~  352 (699)
T 1z45_A          339 DSCKDLWKWTTENP  352 (699)
T ss_dssp             HHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999998764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.93  E-value=1.4e-25  Score=187.31  Aligned_cols=207  Identities=14%  Similarity=0.076  Sum_probs=157.3

Q ss_pred             EEecccCcccHHHHHHHHhhCC-----cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------C
Q 025270           11 LFRTNNNFRLQRPVADWAKSSG-----VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------F   76 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~-----v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~   76 (255)
                      .++.|  +.++.+++++|++.+     +++||++||.++|+.....+++|+++..+. +.|+.+|...|.         +
T Consensus       108 ~~~~n--v~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~  184 (342)
T 2hrz_A          108 GYRIN--LDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL-TSYGTQKAICELLLSDYSRRGF  184 (342)
T ss_dssp             HHHHH--THHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS-SHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHH--HHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc-chHHHHHHHHHHHHHHHHHhcC
Confidence            34445  899999999999876     889999999999987655688898887654 677777665442         6


Q ss_pred             CceEEEecCcccC-CCCCC----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCEEEe
Q 025270           77 SNWASFRPQYMIG-SGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNL  149 (255)
Q Consensus        77 ~~~~ilRp~~v~G-~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~i  149 (255)
                      ++.+++|++.+|| |+...    .++..++..+..|.+..+++++....+++|++|+|++++.+++.+..  ..+++||+
T Consensus       185 ~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni  264 (342)
T 2hrz_A          185 FDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSM  264 (342)
T ss_dssp             CEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEEC
T ss_pred             CCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEc
Confidence            8899999999998 65432    24556677777888766666667778899999999999999987642  12589999


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCC--eeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          150 VSDRAVTLDGMAKLCAQAAGLPV--EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       150 ~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      + ++.+|++|+++.+.+.+|.+.  .+...+......      ........+|++|+++ |||+|.++++++|+++++|+
T Consensus       265 ~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~  336 (342)
T 2hrz_A          265 P-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMR------MCEGWAPGFEAKRARE-LGFTAESSFEEIIQVHIEDE  336 (342)
T ss_dssp             C-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHH------HHTTSCCCBCCHHHHH-TTCCCCSSHHHHHHHHHHHH
T ss_pred             C-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhh------hhcccccccChHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence            6 567999999999999999764  233222211100      0001223689999998 99999999999999999999


Q ss_pred             H
Q 025270          228 V  228 (255)
Q Consensus       228 ~  228 (255)
                      +
T Consensus       337 ~  337 (342)
T 2hrz_A          337 L  337 (342)
T ss_dssp             S
T ss_pred             c
Confidence            7

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.92  E-value=3.4e-25  Score=181.71  Aligned_cols=202  Identities=17%  Similarity=0.121  Sum_probs=148.6

Q ss_pred             CcccHHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------hhCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------ENFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------e~~~~~~ilRp~~v   87 (255)
                      |+.++.+|+++|+..++  ++||++||.++||.....+.+|+++..+. +.|...+...       +.+++++++||+.|
T Consensus        82 ~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v  160 (298)
T 4b4o_A           82 RLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF-DFFSNLVTKWEAAARLPGDSTRQVVVRSGVV  160 (298)
T ss_dssp             HHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS-SHHHHHHHHHHHHHCCSSSSSEEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc-chhHHHHHHHHHHHHhhccCCceeeeeeeeE
Confidence            38899999999998865  45899999999999888889999887653 3333222222       23789999999999


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHH
Q 025270           88 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQA  167 (255)
Q Consensus        88 ~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~  167 (255)
                      ||++..  .+..++.....+.. ...++|++.++|||++|+|+++..+++++..  +++||+++++++|++|+++.+++.
T Consensus       161 ~g~~~~--~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~--~g~yn~~~~~~~t~~e~~~~ia~~  235 (298)
T 4b4o_A          161 LGRGGG--AMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHV--HGVLNGVAPSSATNAEFAQTFGAA  235 (298)
T ss_dssp             ECTTSH--HHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC--CEEEEESCSCCCBHHHHHHHHHHH
T ss_pred             EcCCCC--chhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCCC--CCeEEEECCCccCHHHHHHHHHHH
Confidence            998642  44455555555554 4568899999999999999999999998865  479999999999999999999999


Q ss_pred             hCCCCeeeecCCCccccccccc-CCcCCCceeeCHHHHHHhcCCCccC-ChHHHHHHHHHH
Q 025270          168 AGLPVEIVHYDPKAAGIDAKKA-FPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKERFEE  226 (255)
Q Consensus       168 ~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i~~~~~~  226 (255)
                      +|.+.. ..+|.........+. ..........+++|++ ++||++++ +++++|+++++.
T Consensus       236 lgrp~~-~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          236 LGRRAF-IPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFPELGAALKEIAEN  294 (298)
T ss_dssp             HTCCCC-CCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCCSHHHHHHHHHHC
T ss_pred             hCcCCc-ccCCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCCCHHHHHHHHHHh
Confidence            997643 234433211100000 0000123456778988 49999988 699999999873

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.92  E-value=5e-25  Score=193.64  Aligned_cols=201  Identities=13%  Similarity=0.080  Sum_probs=140.0

Q ss_pred             CcccHHHHHHH-HhhCCcceEEEeccccccC-CCCCCCCCCCCCCCCCCChhHHHHHH--------HhhCCceEEEecCc
Q 025270           17 NFRLQRPVADW-AKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQVEKYI--------SENFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~a-a~~~~v~r~i~~Ss~~vy~-~~~~~~~~E~~~~~~~~~~y~~ek~~--------~e~~~~~~ilRp~~   86 (255)
                      |+.++.+|+++ |++.++++|||+||.++|| .....+++|+++..  .+.|+..+..        .+.+++++++||++
T Consensus       229 Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~--~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~  306 (516)
T 3oh8_A          229 RVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESG--DDFLAEVCRDWEHATAPASDAGKRVAFIRTGV  306 (516)
T ss_dssp             THHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCC--SSHHHHHHHHHHHTTHHHHHTTCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCC--cChHHHHHHHHHHHHHHHHhCCCCEEEEEeeE
Confidence            48999999999 6667899999999999998 44445778887762  3566544433        23489999999999


Q ss_pred             ccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        87 v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      |||++.  ..+..++..+..|.. .+.+++.+.++|||++|+|++++.+++++..  +++||+++++.+|++|+++.+++
T Consensus       307 v~Gp~~--~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~--~g~~ni~~~~~~s~~el~~~i~~  381 (516)
T 3oh8_A          307 ALSGRG--GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI--SGPINAVAPNPVSNADMTKILAT  381 (516)
T ss_dssp             EEBTTB--SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTC--CEEEEESCSCCEEHHHHHHHTTC
T ss_pred             EECCCC--ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCccc--CCcEEEECCCCCCHHHHHHHHHH
Confidence            999874  345555554444543 4567889999999999999999999998764  47999999999999999999999


Q ss_pred             HhCCCCeeeecCCCccccccccc--CCcCCCceeeCHHHHHHhcCCCccCC-hHHHHHHHHHH
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKA--FPFRNMHFYAEPRAAKDILGWRSTTN-LPEDLKERFEE  226 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~i~~~~~~  226 (255)
                      .+|.+. ....|...........  .........++++|++ .|||.|.++ ++++|+++++.
T Consensus       382 ~~g~~~-~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~~l~~  442 (516)
T 3oh8_A          382 SMHRPA-FIQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDIGAAIAHELGY  442 (516)
T ss_dssp             ----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHHHHHHHTC
T ss_pred             HhCCCC-CCCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHHHHHHhCc
Confidence            999765 3333433221100011  1111245678889998 599999987 99999999864

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=1.8e-24  Score=180.37  Aligned_cols=197  Identities=11%  Similarity=-0.012  Sum_probs=144.1

Q ss_pred             CcccHHHHHHHHhh-CCcceEEEeccccccCCCC----CCCCCCCCCC---------------CCCCChhHHHHHHHhh-
Q 025270           17 NFRLQRPVADWAKS-SGVKQFLFISSAGIYKPAD----EPPHVEGDVV---------------KPDAGHVQVEKYISEN-   75 (255)
Q Consensus        17 n~~~~~~ll~aa~~-~~v~r~i~~Ss~~vy~~~~----~~~~~E~~~~---------------~~~~~~y~~ek~~~e~-   75 (255)
                      |+.++.+++++|++ .+++||||+||.++|+...    ..+++|++..               ..+.+.|+.+|+..|. 
T Consensus       107 n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~  186 (342)
T 1y1p_A          107 AIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELA  186 (342)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHH
Confidence            38999999999985 5789999999999986432    1467777621               1112457666655432 


Q ss_pred             ----------CCceEEEecCcccCCCCCCC----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           76 ----------FSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        76 ----------~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                                ++.++++||+++||+.....    .+..++..+..|.+..+++++ +.++|+|++|+|++++.+++++..
T Consensus       187 ~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~  265 (342)
T 1y1p_A          187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQI  265 (342)
T ss_dssp             HHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCccc
Confidence                      67899999999999976542    567788888888877666554 678999999999999999987543


Q ss_pred             CCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCC---CccCChHH
Q 025270          142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW---RSTTNLPE  218 (255)
Q Consensus       142 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~---~p~~~~~~  218 (255)
                      . |+.+. +++..+|+.|+++.+.+.+|.+ .+. .+.....          .....+|++|+++.|||   .+.+++++
T Consensus       266 ~-g~~~~-~~g~~~s~~e~~~~i~~~~~~~-~~~-~~~~~~~----------~~~~~~d~~k~~~~lg~~~~~~~~~l~~  331 (342)
T 1y1p_A          266 E-RRRVY-GTAGTFDWNTVLATFRKLYPSK-TFP-ADFPDQG----------QDLSKFDTAPSLEILKSLGRPGWRSIEE  331 (342)
T ss_dssp             C-SCEEE-ECCEEECHHHHHHHHHHHCTTS-CCC-CCCCCCC----------CCCCEECCHHHHHHHHHTTCCSCCCHHH
T ss_pred             C-CceEE-EeCCCCCHHHHHHHHHHHCCCc-cCC-CCCCccc----------cccccCChHHHHHHHhhcccCCcCCHHH
Confidence            2 35553 4566799999999999999974 221 1111001          12367899999998887   46679999


Q ss_pred             HHHHHHHHHH
Q 025270          219 DLKERFEEYV  228 (255)
Q Consensus       219 ~i~~~~~~~~  228 (255)
                      +|+++++|++
T Consensus       332 ~l~~~~~~~~  341 (342)
T 1y1p_A          332 SIKDLVGSET  341 (342)
T ss_dssp             HHHHHHCCSC
T ss_pred             HHHHHHHHhh
Confidence            9999998864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.91  E-value=8.7e-24  Score=176.24  Aligned_cols=203  Identities=16%  Similarity=0.127  Sum_probs=139.4

Q ss_pred             EEecccCcccHHHHHHHHhhCC-cceEEEecccc-ccCCC---CCCCCCCCCCC-------------CCCCChhHHHHHH
Q 025270           11 LFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAG-IYKPA---DEPPHVEGDVV-------------KPDAGHVQVEKYI   72 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~-vy~~~---~~~~~~E~~~~-------------~~~~~~y~~ek~~   72 (255)
                      .++.|  +.++.+++++|++.+ ++||||+||.+ +|+..   ...+++|+++.             .+..+|..+|+++
T Consensus       102 ~~~~n--v~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  179 (338)
T 2rh8_A          102 MIKPA--IQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAA  179 (338)
T ss_dssp             -CHHH--HHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHH
Confidence            55666  999999999999985 99999999987 44321   11256666421             2445677777766


Q ss_pred             Hh----hCCceEEEecCcccCCCCCCCcHHH--HHHHHHcCCCeeccCCC------CcceeeeeHHHHHHHHHHHhcCCC
Q 025270           73 SE----NFSNWASFRPQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSG------MQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        73 ~e----~~~~~~ilRp~~v~G~~~~~~~~~~--~~~~~~~~~~~~i~~~~------~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      .+    ++++++++||++||||+........  .+.....|... .++..      ...++|+|++|+|++++.+++++.
T Consensus       180 ~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  258 (338)
T 2rh8_A          180 WKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES  258 (338)
T ss_dssp             HHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCC
Confidence            44    4899999999999999765431111  11222444432 11111      123489999999999999998754


Q ss_pred             cCCCCEEEecCCCccCHHHHHHHHHHHhCC-CCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHH
Q 025270          141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  219 (255)
Q Consensus       141 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~  219 (255)
                      .  ++.|+++++ .+|++|+++.+.+.++. +.+.     .....      + ......+|++|+ +.|||+|.++++++
T Consensus       259 ~--~~~~~~~~~-~~s~~e~~~~l~~~~~~~~~~~-----~~~~~------~-~~~~~~~d~~k~-~~lG~~p~~~l~~g  322 (338)
T 2rh8_A          259 A--SGRYICCAA-NTSVPELAKFLSKRYPQYKVPT-----DFGDF------P-PKSKLIISSEKL-VKEGFSFKYGIEEI  322 (338)
T ss_dssp             C--CEEEEECSE-EECHHHHHHHHHHHCTTSCCCC-----CCTTS------C-SSCSCCCCCHHH-HHHTCCCSCCHHHH
T ss_pred             c--CCcEEEecC-CCCHHHHHHHHHHhCCCCCCCC-----CCCCC------C-cCcceeechHHH-HHhCCCCCCCHHHH
Confidence            3  367888765 58999999999998762 2211     10000      0 012367899999 56999999999999


Q ss_pred             HHHHHHHHHHhcc
Q 025270          220 LKERFEEYVKIGR  232 (255)
Q Consensus       220 i~~~~~~~~~~~~  232 (255)
                      |+++++|+++.+.
T Consensus       323 l~~~~~~~~~~~~  335 (338)
T 2rh8_A          323 YDESVEYFKAKGL  335 (338)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999987754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=4.8e-23  Score=171.72  Aligned_cols=206  Identities=15%  Similarity=0.109  Sum_probs=139.6

Q ss_pred             EEecccCcccHHHHHHHHhhCC-cceEEEecccc-ccCCCC-CCCCCCCCCCC--------CCCChhHHHHHHHh-----
Q 025270           11 LFRTNNNFRLQRPVADWAKSSG-VKQFLFISSAG-IYKPAD-EPPHVEGDVVK--------PDAGHVQVEKYISE-----   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~-vy~~~~-~~~~~E~~~~~--------~~~~~y~~ek~~~e-----   74 (255)
                      +++.|  +.++.+++++|++++ ++||||+||.+ +|+... ..+++|+++..        ++.+.|+.+|.+.|     
T Consensus        99 ~~~~n--v~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  176 (337)
T 2c29_D           99 VIKPT--IEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWK  176 (337)
T ss_dssp             THHHH--HHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHH
Confidence            44455  999999999999887 89999999987 555432 23456654321        12245776665443     


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHH--HHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDR--IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                          ++++++++||++||||.........+...  ...|... .++.+ ....|+|++|+|++++.+++++..  ++.|+
T Consensus       177 ~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~  252 (337)
T 2c29_D          177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENPKA--EGRYI  252 (337)
T ss_dssp             HHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTTC--CEEEE
T ss_pred             HHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCccc--CceEE
Confidence                38999999999999998654322222111  1334332 22211 234599999999999999987543  36787


Q ss_pred             ecCCCccCHHHHHHHHHHHhCC-CCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGL-PVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      +++ ..+|++|+++.+.+.++. +.+.     ....      .........+|++|+ ++|||+|.++++++|+++++|+
T Consensus       253 ~~~-~~~s~~e~~~~i~~~~~~~~~~~-----~~~~------~~~~~~~~~~d~~k~-~~lG~~p~~~l~e~l~~~~~~~  319 (337)
T 2c29_D          253 CSS-HDCIILDLAKMLREKYPEYNIPT-----EFKG------VDENLKSVCFSSKKL-TDLGFEFKYSLEDMFTGAVDTC  319 (337)
T ss_dssp             ECC-EEEEHHHHHHHHHHHCTTSCCCS-----CCTT------CCTTCCCCEECCHHH-HHHTCCCCCCHHHHHHHHHHHH
T ss_pred             EeC-CCCCHHHHHHHHHHHCCCccCCC-----CCCc------ccCCCccccccHHHH-HHcCCCcCCCHHHHHHHHHHHH
Confidence            665 458999999999998742 2111     1000      001124567899999 6799999999999999999999


Q ss_pred             HHhccccc
Q 025270          228 VKIGRDKK  235 (255)
Q Consensus       228 ~~~~~~~~  235 (255)
                      ++.+..+.
T Consensus       320 ~~~~~~~~  327 (337)
T 2c29_D          320 RAKGLLPP  327 (337)
T ss_dssp             HHTTSSCS
T ss_pred             HHcCCCCc
Confidence            98765433

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.90  E-value=4.4e-23  Score=166.84  Aligned_cols=190  Identities=16%  Similarity=0.157  Sum_probs=146.0

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---CCceEEEecCc
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---FSNWASFRPQY   86 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---~~~~~ilRp~~   86 (255)
                      ..++.|  +.++.+++++|++.++ +||++||.++|+.... +++|+++..+. +.|+.+|...|.   .++++++||+.
T Consensus        79 ~~~~~n--~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~iR~~~  153 (273)
T 2ggs_A           79 KAYKIN--AEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPI-NYYGLSKLLGETFALQDDSLIIRTSG  153 (273)
T ss_dssp             HHHHHH--THHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCS-SHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             HHHHHh--HHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCC-CHHHHHHHHHHHHHhCCCeEEEeccc
Confidence            334444  8899999999999887 8999999999986543 77888876653 678888876654   27899999999


Q ss_pred             ccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        87 v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      |||+   ..+...++..+..+..+.+.++   .++++|++|+|++++.+++++.   +++||+++ +.+|++|+++.+.+
T Consensus       154 v~G~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~---~g~~~i~~-~~~s~~e~~~~~~~  223 (273)
T 2ggs_A          154 IFRN---KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK---TGIIHVAG-ERISRFELALKIKE  223 (273)
T ss_dssp             CBSS---SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC---CEEEECCC-CCEEHHHHHHHHHH
T ss_pred             cccc---cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc---CCeEEECC-CcccHHHHHHHHHH
Confidence            9982   2345556666777777766653   7899999999999999998764   36999999 89999999999999


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCc-cCChHHHH
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRS-TTNLPEDL  220 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p-~~~~~~~i  220 (255)
                      .+|.+.++...... ..     ..+....+..+|++|++++|||+| .++++++|
T Consensus       224 ~~g~~~~~~~~~~~-~~-----~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          224 KFNLPGEVKEVDEV-RG-----WIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             HTTCCSCEEEESSC-TT-----CCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             HhCCChhhcccccc-cc-----cccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            99988765432111 00     111123567899999999999999 67888765

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=1.2e-22  Score=168.01  Aligned_cols=202  Identities=15%  Similarity=0.096  Sum_probs=136.8

Q ss_pred             EEecccCcccHHHHHHHHhhC-CcceEEEeccccc-cCCCC-CCCCCCCCCC--------CCCCChhHHHHHHHh-----
Q 025270           11 LFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAGI-YKPAD-EPPHVEGDVV--------KPDAGHVQVEKYISE-----   74 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~v-y~~~~-~~~~~E~~~~--------~~~~~~y~~ek~~~e-----   74 (255)
                      +++.|  +.++.+++++|++. +++||||+||.++ |+... ..+++|+++.        .|....|+.+|.+.|     
T Consensus        96 ~~~~n--v~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~  173 (322)
T 2p4h_X           96 VTKRT--VDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLE  173 (322)
T ss_dssp             HHHHH--HHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHH--HHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHH
Confidence            44555  99999999999998 7999999999874 44322 2355665432        111114776665443     


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHH--HHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEW--FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                          ++++++++||++|||+.........  .+.....|....+ +.  ..++|+|++|+|++++.+++++.. . +.||
T Consensus       174 ~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~~-~-g~~~  248 (322)
T 2p4h_X          174 FGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENSVP-G-GRYN  248 (322)
T ss_dssp             HHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCCC-C-EEEE
T ss_pred             HHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcCC-C-CCEE
Confidence                3899999999999999765432111  1112344544332 22  334899999999999999987543 2 4588


Q ss_pred             ecCCCccCHHHHHHHHHHHhCCCCeeeecCCCc-ccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          149 LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA-AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                       ++++.+|++|+++.+.+.++. .++   +... ...     .. ......+|++|+ +.|||+|.++++++|+++++|+
T Consensus       249 -~~~~~~s~~e~~~~i~~~~~~-~~~---~~~~~~~~-----~~-~~~~~~~d~~k~-~~lG~~p~~~~~~~l~~~~~~~  316 (322)
T 2p4h_X          249 -CSPFIVPIEEMSQLLSAKYPE-YQI---LTVDELKE-----IK-GARLPDLNTKKL-VDAGFDFKYTIEDMFDDAIQCC  316 (322)
T ss_dssp             -CCCEEEEHHHHHHHHHHHCTT-SCC---CCTTTTTT-----CC-CEECCEECCHHH-HHTTCCCCCCHHHHHHHHHHHH
T ss_pred             -EcCCCCCHHHHHHHHHHhCCC-CCC---CCCccccC-----CC-CCcceecccHHH-HHhCCccCCCHHHHHHHHHHHH
Confidence             556789999999999987752 111   1110 000     00 013567899999 5699999999999999999999


Q ss_pred             HHhc
Q 025270          228 VKIG  231 (255)
Q Consensus       228 ~~~~  231 (255)
                      ++++
T Consensus       317 ~~~~  320 (322)
T 2p4h_X          317 KEKG  320 (322)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            8765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.88  E-value=9.4e-23  Score=166.00  Aligned_cols=202  Identities=16%  Similarity=0.172  Sum_probs=142.9

Q ss_pred             cceEEecc-----cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEE
Q 025270            8 FKALFRTN-----NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF   82 (255)
Q Consensus         8 ~d~~~~~~-----~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~il   82 (255)
                      .|.++++.     .|+.++.+++++|++.+++|||++||.++|..          +..+..+|...|+++.+.+++++++
T Consensus        66 ~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~~~y~~sK~~~e~~~~~~~~~~~il  135 (286)
T 2zcu_A           66 VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----------PLGLADEHIETEKMLADSGIVYTLL  135 (286)
T ss_dssp             CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----------CSTTHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------cchhHHHHHHHHHHHHHcCCCeEEE
Confidence            45565543     24789999999999999999999999888721          1123346777888888889999999


Q ss_pred             ecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHH
Q 025270           83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAK  162 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~  162 (255)
                      ||+.++++..      .++..+..+..+. .++++..++++|++|+|++++.+++++... |++||+++++.+|++|+++
T Consensus       136 rp~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~~~~~s~~e~~~  207 (286)
T 2zcu_A          136 RNGWYSENYL------ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHE-GKVYELAGDSAWTLTQLAA  207 (286)
T ss_dssp             EECCBHHHHH------TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCT-TCEEEECCSSCBCHHHHHH
T ss_pred             eChHHhhhhH------HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCC-CceEEEeCCCcCCHHHHHH
Confidence            9987766421      1233333333343 445778899999999999999999876433 5899999998999999999


Q ss_pred             HHHHHhCCCCeeeecCCCccccccc-ccCC-------------cCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          163 LCAQAAGLPVEIVHYDPKAAGIDAK-KAFP-------------FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       163 ~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      .+.+.+|.+.++...|......... ...+             ........|++|+++.||| |.++++++|+++++||+
T Consensus       208 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          208 ELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN  286 (286)
T ss_dssp             HHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred             HHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence            9999999988776665432110000 0000             0012355688899999997 66799999999998873

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.87  E-value=5.1e-22  Score=161.77  Aligned_cols=199  Identities=16%  Similarity=0.149  Sum_probs=143.2

Q ss_pred             cceEEecc-c------CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceE
Q 025270            8 FKALFRTN-N------NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA   80 (255)
Q Consensus         8 ~d~~~~~~-~------n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~   80 (255)
                      .|.++++. .      |+.++.+++++|++.+++||||+||.++|..          +..+..+|...|+++.+.+++++
T Consensus        67 ~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----------~~~y~~~K~~~E~~~~~~~~~~~  136 (287)
T 2jl1_A           67 VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES----------IIPLAHVHLATEYAIRTTNIPYT  136 (287)
T ss_dssp             CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC----------CSTHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----------CCchHHHHHHHHHHHHHcCCCeE
Confidence            46666553 1      5889999999999999999999999888732          11223466777777777899999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHH
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  160 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el  160 (255)
                      ++||+.++|+....     ++..+....... .+.++..++++|++|+|++++.+++++... |++||+++++.+|++|+
T Consensus       137 ilrp~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~~~~~s~~e~  209 (287)
T 2jl1_A          137 FLRNALYTDFFVNE-----GLRASTESGAIV-TNAGSGIVNSVTRNELALAAATVLTEEGHE-NKTYNLVSNQPWTFDEL  209 (287)
T ss_dssp             EEEECCBHHHHSSG-----GGHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCT-TEEEEECCSSCBCHHHH
T ss_pred             EEECCEeccccchh-----hHHHHhhCCcee-ccCCCCccCccCHHHHHHHHHHHhcCCCCC-CcEEEecCCCcCCHHHH
Confidence            99999988864221     222333222232 345677889999999999999999876433 58999999989999999


Q ss_pred             HHHHHHHhCCCCeeeecCCCccccccc-ccCC-------------cCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          161 AKLCAQAAGLPVEIVHYDPKAAGIDAK-KAFP-------------FRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       161 ~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      ++.+.+.+|.+.++...|......... ...+             ........|++|+++.||  |.++++++|+++++
T Consensus       210 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          210 AQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             HHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence            999999999988876665431100000 0000             001345678899999999  77899999999875

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.85  E-value=1e-20  Score=162.54  Aligned_cols=206  Identities=11%  Similarity=0.065  Sum_probs=149.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCC-----CCCCCCCCCCCCC--CCCChhHHHHHHHh--------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEGDVVK--PDAGHVQVEKYISE--------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~-----~~~~~~~E~~~~~--~~~~~y~~ek~~~e--------~~~~~~i   81 (255)
                      |+.++.+++++|++ ++++|||+||.++ |.     ....+++|+++..  .+.+.|+.+|+..|        .++++++
T Consensus       174 Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i  251 (427)
T 4f6c_A          174 NVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRI  251 (427)
T ss_dssp             HHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEE
Confidence            49999999999999 8889999999998 43     2345677777632  13467776666554        4899999


Q ss_pred             EecCcccCCCCCCC--------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      +||++|||+.....        .+..++..+..+..++. +.++..++|+|++|+|++++.++..+. . +++||+++++
T Consensus       252 vRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~-~-g~~~~l~~~~  328 (427)
T 4f6c_A          252 VRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT-P-QIIYHVLSPN  328 (427)
T ss_dssp             EEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC-C-CSEEEESCSC
T ss_pred             EeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHHHHHHcCCC-C-CCEEEecCCC
Confidence            99999999976553        25667777777776655 346788999999999999999999876 3 6999999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeeecCCCcccccc---cc---cC--CcCCCceeeCHHHHH---HhcCCCccCChHHHHHH
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA---KK---AF--PFRNMHFYAEPRAAK---DILGWRSTTNLPEDLKE  222 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~---~~---~~--~~~~~~~~~d~~k~~---~~lG~~p~~~~~~~i~~  222 (255)
                      .+++.|+++.+++ +|  .+....+.+......   ..   ..  ........+|+++..   +.+||.+...-++.+++
T Consensus       329 ~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~  405 (427)
T 4f6c_A          329 KMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYH  405 (427)
T ss_dssp             CEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHH
T ss_pred             CCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            9999999999998 66  333322221110000   00   00  001134567777666   45799887666779999


Q ss_pred             HHHHHHHh
Q 025270          223 RFEEYVKI  230 (255)
Q Consensus       223 ~~~~~~~~  230 (255)
                      +++++++.
T Consensus       406 ~~~~l~~~  413 (427)
T 4f6c_A          406 WAQYIKTI  413 (427)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998876

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.84  E-value=1.3e-21  Score=165.00  Aligned_cols=184  Identities=15%  Similarity=0.089  Sum_probs=137.4

Q ss_pred             ceEEecccCcccHHHHHHHHhhCCcc-eEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----hCCceEEEe
Q 025270            9 KALFRTNNNFRLQRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----NFSNWASFR   83 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~~v~-r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----~~~~~~ilR   83 (255)
                      +..++.|  +.++.+++++|++.+++ +|||+||.++|+.           ..+..+|..+|+++.+    .+++++++|
T Consensus        63 ~~~~~~n--~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~-----------~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R  129 (369)
T 3st7_A           63 KEFSLGN--VSYLDHVLDILTRNTKKPAILLSSSIQATQD-----------NPYGESKLQGEQLLREYAEEYGNTVYIYR  129 (369)
T ss_dssp             TTCSSSC--CBHHHHHHHHHTTCSSCCEEEEEEEGGGGSC-----------SHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhCCCCeEEEeCchhhcCC-----------CCchHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence            3344445  99999999999999987 9999999999971           0112245555555554    589999999


Q ss_pred             cCcccCCCCCC---CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHH
Q 025270           84 PQYMIGSGNNK---DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  160 (255)
Q Consensus        84 p~~v~G~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el  160 (255)
                      |+++||++...   .++..++..+..+.++.+ +++++.++++|++|+|++++.+++++....+++||+++++.+|+.|+
T Consensus       130 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~  208 (369)
T 3st7_A          130 WPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEI  208 (369)
T ss_dssp             ECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHH
T ss_pred             CCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHH
Confidence            99999997654   367788888888887766 47889999999999999999999987654258999999999999999


Q ss_pred             HHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHH
Q 025270          161 AKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE  222 (255)
Q Consensus       161 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~  222 (255)
                      ++.+++.+|.+.++.. +....               ..........+||.|..+++.++..
T Consensus       209 ~~~~~~~~g~~~~~~~-~~~~~---------------~~~~~l~~~~l~~~p~~~~~~~l~~  254 (369)
T 3st7_A          209 VDLLYKFKQSRLDRTL-PKLDN---------------LFEKDLYSTYLSYLPSTDFSYPLLM  254 (369)
T ss_dssp             HHHHHHHHHHHHHTCC-CCTTS---------------HHHHHHHHHHHHTSCTTCSCCCCCE
T ss_pred             HHHHHHHhCCCccccc-CCCCC---------------HHHHHHHHHHhcccCCcceeechhh
Confidence            9999999997644321 11111               1111333335888887777655543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.84  E-value=2.5e-20  Score=163.60  Aligned_cols=206  Identities=11%  Similarity=0.072  Sum_probs=148.0

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCC-----CCCCCCCCCCCCCC--CCChhHHHHHHHh--------hCCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEGDVVKP--DAGHVQVEKYISE--------NFSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~-----~~~~~~~E~~~~~~--~~~~y~~ek~~~e--------~~~~~~i   81 (255)
                      |+.++.+++++|++ ++++|||+||.++ |.     ....+++|+++..+  +.+.|+.+|+..|        .|+++++
T Consensus       255 Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~i  332 (508)
T 4f6l_B          255 NVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRI  332 (508)
T ss_dssp             HHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHHcCCCEEE
Confidence            59999999999998 7789999999998 43     23456777776321  3466776666544        4899999


Q ss_pred             EecCcccCCCCCCC--------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           82 FRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        82 lRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      +||++|||+.....        .+..++..+..+..++. ++++..++|+|++|+|++++.++..+. . +++||+++++
T Consensus       333 lRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~-~-~~~~nl~~~~  409 (508)
T 4f6l_B          333 VRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT-P-QIIYHVLSPN  409 (508)
T ss_dssp             EEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHHHHTTBCC-S-CSEEEESCSC
T ss_pred             EecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHHHHHhCCC-C-CCEEEeCCCC
Confidence            99999999976543        25667777777766554 346889999999999999999999876 2 6999999999


Q ss_pred             ccCHHHHHHHHHHHhCCCCeeeecCCCccccc-----cc-cc--CCcCCCceeeCHHHHH---HhcCCCccCChHHHHHH
Q 025270          154 AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID-----AK-KA--FPFRNMHFYAEPRAAK---DILGWRSTTNLPEDLKE  222 (255)
Q Consensus       154 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-----~~-~~--~~~~~~~~~~d~~k~~---~~lG~~p~~~~~~~i~~  222 (255)
                      .+++.|+++.+++..   .+....+.+.....     .. ..  .........+|+++..   +.+||.+...-++.+++
T Consensus       410 ~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~  486 (508)
T 4f6l_B          410 KMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYH  486 (508)
T ss_dssp             EEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHH
Confidence            999999999999754   33332222111000     00 00  0001134567776655   34799887667889999


Q ss_pred             HHHHHHHh
Q 025270          223 RFEEYVKI  230 (255)
Q Consensus       223 ~~~~~~~~  230 (255)
                      +++++++.
T Consensus       487 ~~~~~~~~  494 (508)
T 4f6l_B          487 WAQYIKTI  494 (508)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998876

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.80  E-value=4.4e-19  Score=154.45  Aligned_cols=164  Identities=15%  Similarity=0.191  Sum_probs=119.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCC----------CChhHHHHHHHh---
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----------AGHVQVEKYISE---   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----------~~~y~~ek~~~e---   74 (255)
                      ++..++.|  +.++.+++++|++.++++|||+||.++|+.....+++|+.+..+.          .+.|+.+|++.|   
T Consensus       183 ~~~~~~~N--v~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~  260 (478)
T 4dqv_A          183 YHELFGPN--VAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLL  260 (478)
T ss_dssp             CCEEHHHH--HHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHH
T ss_pred             HHHHHHHH--HHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHH
Confidence            34455555  999999999999999999999999999998766778887654321          123666665544   


Q ss_pred             ------hCCceEEEecCcccCCCCCC------CcHHHHHHHHHcCCCee--ccC---C---CCcceeeeeHHHHHHHHHH
Q 025270           75 ------NFSNWASFRPQYMIGSGNNK------DCEEWFFDRIVRKRPVP--IPG---S---GMQFTNIAHVRDLSSMLTL  134 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~--i~~---~---~~~~~~~i~v~D~a~~~~~  134 (255)
                            .+++++++||++|||+....      .++..++.........+  +.+   +   ++..++++|++|+|++++.
T Consensus       261 ~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~  340 (478)
T 4dqv_A          261 REANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAV  340 (478)
T ss_dssp             HHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHH
Confidence                  38999999999999985421      13444554444322221  111   1   2578899999999999999


Q ss_pred             HhcC----CCcCCCCEEEecCCCc--cCHHHHHHHHHHHhCCCCeee
Q 025270          135 AVEN----PEAASSNIFNLVSDRA--VTLDGMAKLCAQAAGLPVEIV  175 (255)
Q Consensus       135 ~l~~----~~~~~~~~~~i~~~~~--~s~~el~~~i~~~~g~~~~~~  175 (255)
                      ++.+    +... +++||+++++.  +|++|+++.+.+. |.+.+..
T Consensus       341 ~~~~~~~~~~~~-~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i  385 (478)
T 4dqv_A          341 LGARVAGSSLAG-FATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRI  385 (478)
T ss_dssp             HHHTTC-CCCCS-EEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEE
T ss_pred             HHhhcccCCCCC-CceEEecCCCCCCcCHHHHHHHHHHc-CCCcccC
Confidence            9876    3322 58999999987  9999999999985 7766554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.75  E-value=3.3e-18  Score=139.39  Aligned_cols=197  Identities=13%  Similarity=0.125  Sum_probs=133.1

Q ss_pred             cceEEecc-------cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceE
Q 025270            8 FKALFRTN-------NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA   80 (255)
Q Consensus         8 ~d~~~~~~-------~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~   80 (255)
                      .|.++.+.       .|+.++.+++++|+++|++||||+||.+.   ....+.      .........++.+.+.+++++
T Consensus        66 ~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~~~~------~~~~~~~~~e~~~~~~g~~~~  136 (289)
T 3e48_A           66 MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHNNPF------HMSPYFGYASRLLSTSGIDYT  136 (289)
T ss_dssp             CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STTCCS------TTHHHHHHHHHHHHHHCCEEE
T ss_pred             CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCCCCC------ccchhHHHHHHHHHHcCCCEE
Confidence            46666553       14688999999999999999999999432   111111      111112346667778899999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHH
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGM  160 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el  160 (255)
                      ++||+.+||+.     . .++..+..+.. ...+.++..++++|++|+|++++.++.++... |++||++ ++.+|+.|+
T Consensus       137 ilrp~~~~~~~-----~-~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s~~e~  207 (289)
T 3e48_A          137 YVRMAMYMDPL-----K-PYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYDMKEL  207 (289)
T ss_dssp             EEEECEESTTH-----H-HHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEEHHHH
T ss_pred             EEecccccccc-----H-HHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCCHHHH
Confidence            99999999962     1 23333433333 33456788999999999999999999987654 5899999 999999999


Q ss_pred             HHHHHHHhCCCCeeeecCCCcccccccc--cC---------CcCCCceeeCHHHHHHhcCCCccCChHHHHHHH
Q 025270          161 AKLCAQAAGLPVEIVHYDPKAAGIDAKK--AF---------PFRNMHFYAEPRAAKDILGWRSTTNLPEDLKER  223 (255)
Q Consensus       161 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~  223 (255)
                      ++.+++.+|.+.++...+..........  ..         .............+++.+|+.| .++++.+++.
T Consensus       208 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p-~~~~~~~~~~  280 (289)
T 3e48_A          208 AAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQP-QTLQSFLQEN  280 (289)
T ss_dssp             HHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCC-CCHHHHHHC-
T ss_pred             HHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCC-CCHHHHHHHH
Confidence            9999999999877765543211000000  00         0011223345556777899876 4888877654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.75  E-value=4e-18  Score=142.44  Aligned_cols=214  Identities=12%  Similarity=0.085  Sum_probs=140.7

Q ss_pred             ccceEEecc--cCcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhCCce
Q 025270            7 KFKALFRTN--NNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNW   79 (255)
Q Consensus         7 ~~d~~~~~~--~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~~~~   79 (255)
                      .+|.++++.  .|+.++.+++++|+++| +++||+ |   +||.    +.+|.++..+.    .+|..+|+++.+.++++
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~  154 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEESGIPF  154 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCB
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHcCCCE
Confidence            678888877  58999999999999999 999986 3   4543    23344443332    24455666667779999


Q ss_pred             EEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC-CCccCHH
Q 025270           80 ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAVTLD  158 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~-~~~~s~~  158 (255)
                      +++||+.++|...... .. .......+..+.++++|+..++|+|++|+|++++.++.++... +++|++++ ++.+|++
T Consensus       155 tivrpg~~~g~~~~~~-~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~i~g~~~~~s~~  231 (346)
T 3i6i_A          155 TYICCNSIASWPYYNN-IH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTL-NKSVHFRPSCNCLNIN  231 (346)
T ss_dssp             EEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGT-TEEEECCCGGGEECHH
T ss_pred             EEEEecccccccCccc-cc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcccc-CeEEEEeCCCCCCCHH
Confidence            9999999999654331 11 1111224556788899999999999999999999999987644 48899885 4789999


Q ss_pred             HHHHHHHHHhCCCCeeeecCCCcccccc-cccCC------------cCCCceeeCH-----HHHHHhc-CCCccCChHHH
Q 025270          159 GMAKLCAQAAGLPVEIVHYDPKAAGIDA-KKAFP------------FRNMHFYAEP-----RAAKDIL-GWRSTTNLPED  219 (255)
Q Consensus       159 el~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~d~-----~k~~~~l-G~~p~~~~~~~  219 (255)
                      |+++.+++.+|.+.++...+........ ....+            .......++.     .++.+.+ ++++ +++++.
T Consensus       232 e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~-t~~~e~  310 (346)
T 3i6i_A          232 ELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSF-RTVEEC  310 (346)
T ss_dssp             HHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCC-CCHHHH
T ss_pred             HHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCc-CcHHHH
Confidence            9999999999999888766553220000 00000            0000011111     2233333 4444 699999


Q ss_pred             HHHHHHHHHHhcc
Q 025270          220 LKERFEEYVKIGR  232 (255)
Q Consensus       220 i~~~~~~~~~~~~  232 (255)
                      +++++.|+..+..
T Consensus       311 l~~~~~~~~~~~~  323 (346)
T 3i6i_A          311 FGEYIVKMEEKQP  323 (346)
T ss_dssp             HHHHHCC------
T ss_pred             HHHHHHHhhcccc
Confidence            9999999887643

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.71  E-value=7.5e-17  Score=134.66  Aligned_cols=135  Identities=15%  Similarity=0.156  Sum_probs=107.1

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----Hh-------hCCc
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----SE-------NFSN   78 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~e-------~~~~   78 (255)
                      .++.|  +.++.+++++|.+.++++||++||..++..               .+.|+.+|.+     .+       .+++
T Consensus       114 ~~~~N--v~gt~~l~~aa~~~~v~~~V~~SS~~~~~p---------------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~  176 (344)
T 2gn4_A          114 CIKTN--IMGASNVINACLKNAISQVIALSTDKAANP---------------INLYGATKLCSDKLFVSANNFKGSSQTQ  176 (344)
T ss_dssp             HHHHH--HHHHHHHHHHHHHTTCSEEEEECCGGGSSC---------------CSHHHHHHHHHHHHHHHGGGCCCSSCCE
T ss_pred             HHHHH--HHHHHHHHHHHHhCCCCEEEEecCCccCCC---------------ccHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence            34445  899999999999999999999999765521               1455555544     33       2589


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCC-CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCH
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  157 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~  157 (255)
                      ++++|||+|||+..  ..++.++..+..|. ++.+. ++...++|+|++|+|++++.++++...  |++|++.++ .+|+
T Consensus       177 ~~~vRpg~v~g~~~--~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~~--g~~~~~~~~-~~s~  250 (344)
T 2gn4_A          177 FSVVRYGNVVGSRG--SVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMHG--GEIFVPKIP-SMKM  250 (344)
T ss_dssp             EEEECCCEETTCTT--SHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCCS--SCEEEECCC-EEEH
T ss_pred             EEEEEeccEECCCC--CHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhccC--CCEEecCCC-cEEH
Confidence            99999999999864  35677888888887 77765 678889999999999999999987643  689998876 5999


Q ss_pred             HHHHHHHHHHh
Q 025270          158 DGMAKLCAQAA  168 (255)
Q Consensus       158 ~el~~~i~~~~  168 (255)
                      .|+++.+.+.+
T Consensus       251 ~el~~~i~~~~  261 (344)
T 2gn4_A          251 TDLAKALAPNT  261 (344)
T ss_dssp             HHHHHHHCTTC
T ss_pred             HHHHHHHHHhC
Confidence            99999998644

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.68  E-value=1.6e-16  Score=127.92  Aligned_cols=143  Identities=14%  Similarity=0.074  Sum_probs=109.5

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~   86 (255)
                      |+.++.+++++|++.+++||||+||.++|+.. ...+++|+++..+. +.|+.+|...|         .+++++++||+.
T Consensus        86 n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~  164 (267)
T 3ay3_A           86 NIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD-SLYGLSKCFGEDLASLYYHKFDIETLNIRIGS  164 (267)
T ss_dssp             THHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHTTCCCEEEEEECB
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHcCCCEEEEecee
Confidence            48999999999999999999999999999864 34678888887654 67776665443         389999999999


Q ss_pred             ccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           87 MIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        87 v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      +|+...                      ++...++++|++|+|+++..+++++... +++|++.++.             
T Consensus       165 v~~~~~----------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~-------------  208 (267)
T 3ay3_A          165 CFPKPK----------------------DARMMATWLSVDDFMRLMKRAFVAPKLG-CTVVYGASAN-------------  208 (267)
T ss_dssp             CSSSCC----------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC-EEEEEECCSC-------------
T ss_pred             ecCCCC----------------------CCCeeeccccHHHHHHHHHHHHhCCCCC-ceeEecCCCc-------------
Confidence            995310                      2234578999999999999999977542 2567765421             


Q ss_pred             HhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          167 AAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       167 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                                                  .....|..++ +.|||.|.++++++++++.+
T Consensus       209 ----------------------------~~~~~d~~~~-~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          209 ----------------------------TESWWDNDKS-AFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             ----------------------------SSCCBCCGGG-GGGCCCCCCCGGGGHHHHHH
T ss_pred             ----------------------------cccccCHHHH-HHcCCCCCCCHHHHHHHHHh
Confidence                                        1123567777 78999999999999998754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.67  E-value=9e-17  Score=126.23  Aligned_cols=131  Identities=17%  Similarity=0.176  Sum_probs=95.9

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.+++||||+||.++|+..... ..++.+..| .+.|+..|...|         .+++++++||+.+
T Consensus        88 n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p-~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v  165 (227)
T 3dhn_A           88 TIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVP-ENILPGVKALGEFYLNFLMKEKEIDWVFFSPAAD  165 (227)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSC-GGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcch-HHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcc
Confidence            49999999999999999999999999877543322 233444443 367777776655         2789999999999


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           88 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        88 ~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      ||++.....       ...+....+.. +.. ++++|++|+|++++.+++++... |++|+++++++.++.+
T Consensus       166 ~g~~~~~~~-------~~~~~~~~~~~-~~~-~~~i~~~Dva~ai~~~l~~~~~~-g~~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          166 MRPGVRTGR-------YRLGKDDMIVD-IVG-NSHISVEDYAAAMIDELEHPKHH-QERFTIGYLEHHHHHH  227 (227)
T ss_dssp             EESCCCCCC-------CEEESSBCCCC-TTS-CCEEEHHHHHHHHHHHHHSCCCC-SEEEEEECCSCCC---
T ss_pred             cCCCccccc-------eeecCCCcccC-CCC-CcEEeHHHHHHHHHHHHhCcccc-CcEEEEEeehhcccCC
Confidence            999765431       11233333332 222 89999999999999999998765 5999999999888753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.62  E-value=4.2e-16  Score=130.47  Aligned_cols=154  Identities=14%  Similarity=0.043  Sum_probs=112.5

Q ss_pred             cccHHHHHHHHhhCC-cceEEEecccc--ccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCC
Q 025270           18 FRLQRPVADWAKSSG-VKQFLFISSAG--IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNK   94 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~-v~r~i~~Ss~~--vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~   94 (255)
                      ..+ ++++++|++.| ++||||+||.+  .|+..        .+..+..+|...|+++.+.+++++++||+ +||++...
T Consensus        90 ~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~--------~~~~y~~sK~~~E~~~~~~gi~~~ivrpg-~~g~~~~~  159 (352)
T 1xgk_A           90 AIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPW--------PAVPMWAPKFTVENYVRQLGLPSTFVYAG-IYNNNFTS  159 (352)
T ss_dssp             HHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSC--------CCCTTTHHHHHHHHHHHTSSSCEEEEEEC-EEGGGCBS
T ss_pred             HHH-HHHHHHHHHcCCccEEEEeCCccccccCCC--------CCccHHHHHHHHHHHHHHcCCCEEEEecc-eecCCchh
Confidence            454 99999999999 99999999975  45431        11223457888888888889999999986 78876543


Q ss_pred             CcHHHHHHH-HHcCCC-eeccCCCCcceeeeeH-HHHHHHHHHHhcCCCc-CCCCEEEecCCCccCHHHHHHHHHHHhCC
Q 025270           95 DCEEWFFDR-IVRKRP-VPIPGSGMQFTNIAHV-RDLSSMLTLAVENPEA-ASSNIFNLVSDRAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus        95 ~~~~~~~~~-~~~~~~-~~i~~~~~~~~~~i~v-~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~s~~el~~~i~~~~g~  170 (255)
                      ...+.+... ...|.. +.+++++++.++++|+ +|+|++++.+++++.. ..+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       160 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          160 LPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             SSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTS
T ss_pred             cccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCC
Confidence            211111001 122332 2446778889999999 8999999999987531 2369999995 579999999999999999


Q ss_pred             CCeeeecCCCcc
Q 025270          171 PVEIVHYDPKAA  182 (255)
Q Consensus       171 ~~~~~~~~~~~~  182 (255)
                      +.++..+|....
T Consensus       239 ~~~~~~vp~~~~  250 (352)
T 1xgk_A          239 RVTYVQVPKVEI  250 (352)
T ss_dssp             CEEEEECSSCCC
T ss_pred             CCceEECCHHHH
Confidence            988877775543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.62  E-value=1.7e-16  Score=129.80  Aligned_cols=151  Identities=17%  Similarity=0.126  Sum_probs=108.9

Q ss_pred             cccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCcH
Q 025270           18 FRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE   97 (255)
Q Consensus        18 ~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~~   97 (255)
                      +.++.+++++|++.|++|||++||.++|+.....+     ...+..+|...|+++++++++++++||+.+||+....   
T Consensus        92 ~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~-----~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~~~~~~---  163 (299)
T 2wm3_A           92 VKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRL-----AAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSH---  163 (299)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSC-----CCHHHHHHHHHHHHHHHHTCCEEEEECCEEGGGGGTT---
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcc-----cCchhhHHHHHHHHHHHCCCCEEEEeecHHhhhchhh---
Confidence            66899999999999999999999888876432110     0111234566777777789999999999999974321   


Q ss_pred             HHHHHHH-HcCCCee-ccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeee
Q 025270           98 EWFFDRI-VRKRPVP-IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV  175 (255)
Q Consensus        98 ~~~~~~~-~~~~~~~-i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~  175 (255)
                        ++... ..|.... ....++..++++|++|+|+++..++.++....|++|++++ +.+|+.|+++.+.+.+|.+.++.
T Consensus       164 --~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~  240 (299)
T 2wm3_A          164 --FLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDA  240 (299)
T ss_dssp             --TCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEEC
T ss_pred             --cCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeE
Confidence              11111 2232211 1224678899999999999999999875322358999986 57999999999999999987766


Q ss_pred             ecCC
Q 025270          176 HYDP  179 (255)
Q Consensus       176 ~~~~  179 (255)
                      ..|.
T Consensus       241 ~~~~  244 (299)
T 2wm3_A          241 KMTP  244 (299)
T ss_dssp             CCCT
T ss_pred             ecCH
Confidence            5554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.60  E-value=2.4e-15  Score=123.69  Aligned_cols=163  Identities=10%  Similarity=0.122  Sum_probs=114.4

Q ss_pred             cceEEecc--c----CcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhC
Q 025270            8 FKALFRTN--N----NFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENF   76 (255)
Q Consensus         8 ~d~~~~~~--~----n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~   76 (255)
                      .|.++++.  .    |+.++.+++++|+++| ++|||+ |   +||.....+   +.+..|.    .+|..+|+++++.+
T Consensus        77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~~~~g  149 (313)
T 1qyd_A           77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAIEAAS  149 (313)
T ss_dssp             CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHHHhcC
Confidence            56666654  2    6889999999999998 999985 3   455322211   1111121    34566777777789


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC-Ccc
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAV  155 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~-~~~  155 (255)
                      ++++++||+.++|+..... ..........+..+.++++++..++++|++|+|++++.++.++... +++|++.++ +.+
T Consensus       150 ~~~~ilrp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~  227 (313)
T 1qyd_A          150 IPYTYVSSNMFAGYFAGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL-NKTMYIRPPMNIL  227 (313)
T ss_dssp             CCBCEEECCEEHHHHTTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGS-SSEEECCCGGGEE
T ss_pred             CCeEEEEeceecccccccc-ccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccC-CceEEEeCCCCcc
Confidence            9999999999987532210 0000000123445567788889999999999999999999977544 478888764 689


Q ss_pred             CHHHHHHHHHHHhCCCCeeeecCC
Q 025270          156 TLDGMAKLCAQAAGLPVEIVHYDP  179 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~~~~~  179 (255)
                      |++|+++.+.+.+|.+.++...|.
T Consensus       228 s~~e~~~~~~~~~g~~~~~~~~~~  251 (313)
T 1qyd_A          228 SQKEVIQIWERLSEQNLDKIYISS  251 (313)
T ss_dssp             EHHHHHHHHHHHHTCCCEECCBCS
T ss_pred             CHHHHHHHHHHhcCCCCceEECCH
Confidence            999999999999999888776654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.58  E-value=6.4e-16  Score=122.18  Aligned_cols=129  Identities=12%  Similarity=0.215  Sum_probs=92.9

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++++|++.+++|||++||.+.+..... +   .....+..+|...|+++++.+++++++||+.+||+..... 
T Consensus       107 n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~-~---~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg~v~~~~~~~~-  181 (236)
T 3e8x_A          107 DLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQG-P---MNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGK-  181 (236)
T ss_dssp             TTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGS-C---GGGHHHHHHHHHHHHHHHHSSSEEEEEEECSEECSCCCSE-
T ss_pred             hHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCC-h---hhhhhHHHHHHHHHHHHHHCCCCEEEEeCCcccCCCCCCe-
Confidence            4999999999999999999999999554432100 0   0000111234445555666699999999999999864331 


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHH
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCA  165 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~  165 (255)
                                   +....++...+++++++|+|++++.+++++... |++|+++++. .+++|+++.++
T Consensus       182 -------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~-g~~~~v~~~~-~~~~e~~~~i~  235 (236)
T 3e8x_A          182 -------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTI-GKTFEVLNGD-TPIAKVVEQLG  235 (236)
T ss_dssp             -------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGT-TEEEEEEECS-EEHHHHHHTC-
T ss_pred             -------------EEeccCCCcccCcEeHHHHHHHHHHHhcCcccc-CCeEEEeCCC-cCHHHHHHHhc
Confidence                         222234455688999999999999999987543 6899999884 99999998765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.56  E-value=8.9e-16  Score=122.24  Aligned_cols=141  Identities=17%  Similarity=0.171  Sum_probs=99.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++++|++.++++||++||.+++....  +........+..+|...|.++++.+++++++||+.+||+..... 
T Consensus       109 n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~--~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~-  185 (253)
T 1xq6_A          109 DWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-  185 (253)
T ss_dssp             TTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--GGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS-
T ss_pred             eHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC--ccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh-
Confidence            499999999999999999999999988764211  11100000011145666667777799999999999999864321 


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC---ccCHHHHHHHHHHHhCC
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR---AVTLDGMAKLCAQAAGL  170 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~---~~s~~el~~~i~~~~g~  170 (255)
                            .+..+....+++   ...+++|++|+|++++.+++++... +++||+++++   .+|++|+++.+++.+|+
T Consensus       186 ------~~~~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~~-g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          186 ------ELLVGKDDELLQ---TDTKTVPRADVAEVCIQALLFEEAK-NKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             ------CEEEESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGGGT-TEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             ------hhhccCCcCCcC---CCCcEEcHHHHHHHHHHHHcCcccc-CCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence                  011111112222   1356999999999999999976543 5899999864   59999999999998885

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.55  E-value=7.7e-15  Score=121.02  Aligned_cols=159  Identities=12%  Similarity=0.130  Sum_probs=115.3

Q ss_pred             cceEEecc--cCcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhCCceE
Q 025270            8 FKALFRTN--NNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWA   80 (255)
Q Consensus         8 ~d~~~~~~--~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~~~~~   80 (255)
                      .|.++++.  .++.++.+++++|+++| ++|||+ |   +||...    +|..+..|.    .+|..+|+++++.+++++
T Consensus        80 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~  151 (318)
T 2r6j_A           80 VDVVISALAFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEANIPYT  151 (318)
T ss_dssp             CSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTTCCBE
T ss_pred             CCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcCCCeE
Confidence            56677665  34678999999999998 999985 3   344321    122221111    355667777777899999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC-CCccCHHH
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAVTLDG  159 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~-~~~~s~~e  159 (255)
                      ++||+.+++.     +.+.++.....+..+.++++++..++++|++|+|++++.++.++... +++|++.+ ++.+|++|
T Consensus       152 ~lr~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~s~~e  225 (318)
T 2r6j_A          152 YVSANCFASY-----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL-NRVVIYRPSTNIITQLE  225 (318)
T ss_dssp             EEECCEEHHH-----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT-TEEEECCCGGGEEEHHH
T ss_pred             EEEcceehhh-----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc-CeEEEecCCCCccCHHH
Confidence            9999988763     22233333334555677788889999999999999999999876543 47788765 47899999


Q ss_pred             HHHHHHHHhCCCCeeeecCCC
Q 025270          160 MAKLCAQAAGLPVEIVHYDPK  180 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~  180 (255)
                      +++.+.+.+|.+.++...+..
T Consensus       226 ~~~~~~~~~g~~~~~~~~~~~  246 (318)
T 2r6j_A          226 LISRWEKKIGKKFKKIHVPEE  246 (318)
T ss_dssp             HHHHHHHHHTCCCEEEEECHH
T ss_pred             HHHHHHHHhCCCCceeecCHH
Confidence            999999999999888766543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.53  E-value=3.6e-15  Score=116.51  Aligned_cols=124  Identities=9%  Similarity=0.147  Sum_probs=93.3

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCC----CCChhHHHHHH-HhhCCceEEEecCcccCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP----DAGHVQVEKYI-SENFSNWASFRPQYMIGSG   91 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~----~~~~y~~ek~~-~e~~~~~~ilRp~~v~G~~   91 (255)
                      |+.++.+++++|++.++++||++||.++++..   +..| .+..+    ..+|...|+++ .+.+++++++||+.+||+.
T Consensus        82 n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~  157 (219)
T 3dqp_A           82 DLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEE  157 (219)
T ss_dssp             CCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSC
T ss_pred             eHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCC
Confidence            59999999999999999999999998777532   2333 21111    12444555666 5569999999999999986


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHH
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKL  163 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~  163 (255)
                      ....              +. .  +...+++++++|+|++++.+++++... +++||++++. .+++|+...
T Consensus       158 ~~~~--------------~~-~--~~~~~~~i~~~Dva~~i~~~l~~~~~~-g~~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          158 ATGL--------------ID-I--NDEVSASNTIGDVADTIKELVMTDHSI-GKVISMHNGK-TAIKEALES  210 (219)
T ss_dssp             CCSE--------------EE-E--SSSCCCCEEHHHHHHHHHHHHTCGGGT-TEEEEEEECS-EEHHHHHHT
T ss_pred             CCCc--------------cc-c--CCCcCCcccHHHHHHHHHHHHhCcccc-CcEEEeCCCC-ccHHHHHHH
Confidence            5432              11 1  256788999999999999999987644 5899998886 899998764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.51  E-value=2.3e-14  Score=115.42  Aligned_cols=127  Identities=15%  Similarity=0.058  Sum_probs=98.5

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCCCCCCCCCChhHHHHHHHh---------hCC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEKYISE---------NFS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~   77 (255)
                      ++.+++.|  +.++.+++++|++.+++|||++||..+|+.. ...+++|+.+..+. +.|+.+|...|         +++
T Consensus        80 ~~~~~~~N--~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~-~~Y~~sK~~~e~~~~~~a~~~g~  156 (267)
T 3rft_A           80 FEQILQGN--IIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD-GLYGVSKCFGENLARMYFDKFGQ  156 (267)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHhCC
Confidence            44455556  9999999999999999999999999999743 34577887776654 77887776543         489


Q ss_pred             ceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCH
Q 025270           78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  157 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~  157 (255)
                      +++++||+.|||+.                      +++....++++++|+++++..+++.+... +.++++.+++..++
T Consensus       157 ~~~~vr~~~v~~~~----------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~-~~~~~~~s~~~~~~  213 (267)
T 3rft_A          157 ETALVRIGSCTPEP----------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLG-CPVVWGASANDAGW  213 (267)
T ss_dssp             CEEEEEECBCSSSC----------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCC-SCEEEECCCCTTCC
T ss_pred             eEEEEEeecccCCC----------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCC-ceEEEEeCCCCCCc
Confidence            99999999999862                      23455677899999999999999987654 26788887776665


Q ss_pred             HHH
Q 025270          158 DGM  160 (255)
Q Consensus       158 ~el  160 (255)
                      .++
T Consensus       214 ~~~  216 (267)
T 3rft_A          214 WDN  216 (267)
T ss_dssp             BCC
T ss_pred             ccC
Confidence            554

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.50  E-value=4.8e-14  Score=109.96  Aligned_cols=133  Identities=11%  Similarity=0.186  Sum_probs=73.3

Q ss_pred             CcccHHHHHHHHhhCCcceEEEecccccc-CCCCCCCCCCCCCCCC----CCChhHHHHH--HH--hhCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKP----DAGHVQVEKY--IS--ENFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~----~~~~y~~ek~--~~--e~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.+++|+|++||.+++ +.....+..|+.+..+    ..+|...+.+  +.  +.+++++++||+.+
T Consensus        79 ~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v  158 (221)
T 3ew7_A           79 HVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAM  158 (221)
T ss_dssp             HHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSC
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcce
Confidence            57899999999999989999999998754 4433334444444322    2344555544  44  56899999999999


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           88 IGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        88 ~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      ||++.....   +   ...+..+.+.+++.   ++++++|+|++++.+++++... |++||++++...+.+|
T Consensus       159 ~g~~~~~~~---~---~~~~~~~~~~~~~~---~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          159 FEPGERTGD---Y---QIGKDHLLFGSDGN---SFISMEDYAIAVLDEIERPNHL-NEHFTVAGKLEHHHHH  220 (221)
T ss_dssp             CCCC------------------------------CCCHHHHHHHHHHHHHSCSCT-TSEEECCC--------
T ss_pred             ecCCCccCc---e---EeccccceecCCCC---ceEeHHHHHHHHHHHHhCcccc-CCEEEECCCCcccccc
Confidence            998432211   1   11233334443332   6999999999999999988765 5999999988777654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.50  E-value=2.3e-14  Score=118.26  Aligned_cols=158  Identities=13%  Similarity=0.144  Sum_probs=113.7

Q ss_pred             cceEEecc--cCcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhCCceE
Q 025270            8 FKALFRTN--NNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWA   80 (255)
Q Consensus         8 ~d~~~~~~--~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~~~~~   80 (255)
                      .|.++++.  ..+.++.+++++|+++| ++|||+ |   +||...    +|..+..|.    .+|...|+++++.+++++
T Consensus        78 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~  149 (321)
T 3c1o_A           78 VDIVISALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAALPYT  149 (321)
T ss_dssp             CSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHTCCBE
T ss_pred             CCEEEECCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcCCCeE
Confidence            56676665  34678999999999998 999983 3   354321    122221111    345667777777799999


Q ss_pred             EEecCcccCCCCCCCcHHHHHH---HHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC-CCccC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFD---RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS-DRAVT  156 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~-~~~~s  156 (255)
                      ++||+.++|+.     .+.+..   ....+..+.++++++..++++|++|+|++++.++.++... +++|++.+ ++.+|
T Consensus       150 ~lrp~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~g~~~~~t  223 (321)
T 3c1o_A          150 YVSANCFGAYF-----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCC-NRIVIYRPPKNIIS  223 (321)
T ss_dssp             EEECCEEHHHH-----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGT-TEEEECCCGGGEEE
T ss_pred             EEEeceecccc-----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcccc-CeEEEEeCCCCccc
Confidence            99999888742     222221   1123445667788889999999999999999999876543 47788876 47899


Q ss_pred             HHHHHHHHHHHhCCCCeeeecCC
Q 025270          157 LDGMAKLCAQAAGLPVEIVHYDP  179 (255)
Q Consensus       157 ~~el~~~i~~~~g~~~~~~~~~~  179 (255)
                      ++|+++.+.+.+|.+.++...+.
T Consensus       224 ~~e~~~~~~~~~g~~~~~~~~~~  246 (321)
T 3c1o_A          224 QNELISLWEAKSGLSFKKVHMPD  246 (321)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECH
T ss_pred             HHHHHHHHHHHcCCcceeeeCCH
Confidence            99999999999999888776653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.50  E-value=6.8e-14  Score=114.64  Aligned_cols=159  Identities=14%  Similarity=0.115  Sum_probs=113.6

Q ss_pred             ccceEEecc--cCcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhCCce
Q 025270            7 KFKALFRTN--NNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNW   79 (255)
Q Consensus         7 ~~d~~~~~~--~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~~~~   79 (255)
                      ..|.++++.  .++.++.+++++|+++| ++|||+ |   +||...    ++..+..|.    .+|...++++++.++++
T Consensus        76 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~i~~  147 (307)
T 2gas_A           76 QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEAEGVPY  147 (307)
T ss_dssp             TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCB
T ss_pred             CCCEEEECCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHHcCCCe
Confidence            356777765  34788999999999998 999983 3   354321    122222221    34556666777779999


Q ss_pred             EEEecCcccCCCCCCCcHHHHHHH---HHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC-Ccc
Q 025270           80 ASFRPQYMIGSGNNKDCEEWFFDR---IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAV  155 (255)
Q Consensus        80 ~ilRp~~v~G~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~-~~~  155 (255)
                      +++||+.++|+....     +...   ...+..+.++++++..++++|++|+|++++.++.++... +++|++.++ +.+
T Consensus       148 ~~lrp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~~~~~~~  221 (307)
T 2gas_A          148 TYLCCHAFTGYFLRN-----LAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTL-NKAVHIRLPKNYL  221 (307)
T ss_dssp             EEEECCEETTTTGGG-----TTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGT-TEEEECCCGGGEE
T ss_pred             EEEEcceeecccccc-----ccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcccc-CceEEEeCCCCcC
Confidence            999999988753211     1111   123345667778888999999999999999999876543 477877754 689


Q ss_pred             CHHHHHHHHHHHhCCCCeeeecCC
Q 025270          156 TLDGMAKLCAQAAGLPVEIVHYDP  179 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~~~~~  179 (255)
                      |++|+++.+.+.+|.+.++...|.
T Consensus       222 s~~e~~~~~~~~~g~~~~~~~~~~  245 (307)
T 2gas_A          222 TQNEVIALWEKKIGKTLEKTYVSE  245 (307)
T ss_dssp             EHHHHHHHHHHHHTSCCEEEEECH
T ss_pred             CHHHHHHHHHHHhCCCCceeecCH
Confidence            999999999999999888776654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.49  E-value=3.5e-15  Score=116.00  Aligned_cols=126  Identities=17%  Similarity=0.126  Sum_probs=88.0

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCc-eEEEecCcccC
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-WASFRPQYMIG   89 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~-~~ilRp~~v~G   89 (255)
                      .++.|  +.++.+++++|++.++++||++||.++|+...         ..+..+|...|+++.+.+++ ++++||+.+||
T Consensus        86 ~~~~n--~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~---------~~y~~sK~~~e~~~~~~~~~~~~~vrp~~v~g  154 (215)
T 2a35_A           86 FRAVD--FDLPLAVGKRALEMGARHYLVVSALGADAKSS---------IFYNRVKGELEQALQEQGWPQLTIARPSLLFG  154 (215)
T ss_dssp             HHHHH--THHHHHHHHHHHHTTCCEEEEECCTTCCTTCS---------SHHHHHHHHHHHHHTTSCCSEEEEEECCSEES
T ss_pred             HHHhh--HHHHHHHHHHHHHcCCCEEEEECCcccCCCCc---------cHHHHHHHHHHHHHHHcCCCeEEEEeCceeeC
Confidence            33445  88999999999999999999999999886311         01112344455555556899 99999999999


Q ss_pred             CCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHH
Q 025270           90 SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  158 (255)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~  158 (255)
                      +.....+..    .+. +...++ ++  ..++++|++|+|++++.+++++.   +++||+++++.+++.
T Consensus       155 ~~~~~~~~~----~~~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          155 PREEFRLAE----ILA-APIARI-LP--GKYHGIEACDLARALWRLALEEG---KGVRFVESDELRKLG  212 (215)
T ss_dssp             TTSCEEGGG----GTT-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHHHHHHHH
T ss_pred             CCCcchHHH----HHH-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC---CCceEEcHHHHHHhh
Confidence            976533222    112 221222 22  26789999999999999999875   489999987765543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.49  E-value=1.5e-14  Score=118.69  Aligned_cols=161  Identities=16%  Similarity=0.132  Sum_probs=113.8

Q ss_pred             cceEEecc--cCcccHHHHHHHHhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhCCceE
Q 025270            8 FKALFRTN--NNFRLQRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWA   80 (255)
Q Consensus         8 ~d~~~~~~--~n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~~~~~   80 (255)
                      .|.++++.  .++.++.+++++|+++| ++|||+ |+   ||...    .|..+..|.    .+|..+++++++.+++++
T Consensus        78 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~  149 (308)
T 1qyc_A           78 VDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGNDV----DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYT  149 (308)
T ss_dssp             CSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCCBE
T ss_pred             CCEEEECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccCc----cccccCCcchhHHHHHHHHHHHHHhcCCCeE
Confidence            56677665  34678999999999998 999984 43   44221    122222221    245666777777899999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCC-CccCHHH
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSD-RAVTLDG  159 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~-~~~s~~e  159 (255)
                      ++||+.++|+..... ... ......+..+.++++++..++++|++|+|++++.++.++... +++|++.++ +.+|++|
T Consensus       150 ~~r~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~s~~e  226 (308)
T 1qyc_A          150 YVSSNCFAGYFLRSL-AQA-GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL-NKTLYLRLPANTLSLNE  226 (308)
T ss_dssp             EEECCEEHHHHTTTT-TCT-TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGT-TEEEECCCGGGEEEHHH
T ss_pred             EEEeceecccccccc-ccc-cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcccc-CeEEEEeCCCCccCHHH
Confidence            999999988532211 000 001123445677788889999999999999999999876544 478888754 6899999


Q ss_pred             HHHHHHHHhCCCCeeeecCC
Q 025270          160 MAKLCAQAAGLPVEIVHYDP  179 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~  179 (255)
                      +++.+.+.+|.+.++...|.
T Consensus       227 ~~~~~~~~~g~~~~~~~~~~  246 (308)
T 1qyc_A          227 LVALWEKKIDKTLEKAYVPE  246 (308)
T ss_dssp             HHHHHHHHTTSCCEEEEECH
T ss_pred             HHHHHHHHhCCCCceEeCCH
Confidence            99999999999888776654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.46  E-value=2.4e-13  Score=106.31  Aligned_cols=129  Identities=12%  Similarity=0.131  Sum_probs=86.6

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccC-CCCC--CCCCCCCCCCCCCChhHHHHHHH--------hhCCceEEEecC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYK-PADE--PPHVEGDVVKPDAGHVQVEKYIS--------ENFSNWASFRPQ   85 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~-~~~~--~~~~E~~~~~~~~~~y~~ek~~~--------e~~~~~~ilRp~   85 (255)
                      |+.++.+++++|++.+ +|||++||.+.+. ....  .+..+...+.+ .+.|+..|...        +.+++++++||+
T Consensus        82 n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~  159 (224)
T 3h2s_A           82 HLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS-QPWYDGALYQYYEYQFLQMNANVNWIGISPS  159 (224)
T ss_dssp             HHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG-STTHHHHHHHHHHHHHHTTCTTSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc-chhhHHHHHHHHHHHHHHhcCCCcEEEEcCc
Confidence            5899999999999999 8999999986543 3222  12333333222 35677666543        348999999999


Q ss_pred             cccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHH
Q 025270           86 YMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  158 (255)
Q Consensus        86 ~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~  158 (255)
                      .+||++....+       ......+..   +....++++++|+|++++.+++++... +++|++++.+..+..
T Consensus       160 ~v~g~~~~~~~-------~~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~-g~~~~~~~~~~~~~~  221 (224)
T 3h2s_A          160 EAFPSGPATSY-------VAGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAI-RDRIVVRDADLEHHH  221 (224)
T ss_dssp             SBCCCCCCCCE-------EEESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCT-TSEEEEEECC-----
T ss_pred             cccCCCcccCc-------eeccccccc---CCCCCceEeHHHHHHHHHHHhcCcccc-CCEEEEecCcchhcc
Confidence            99998543320       011122222   344568999999999999999988765 599999987765543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.28  E-value=3e-12  Score=98.50  Aligned_cols=119  Identities=15%  Similarity=0.175  Sum_probs=79.7

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++++|++.++++||++||.++|+.....+.   ....+..+|...|.++++.+++++++||+.+ |+......
T Consensus        87 n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~---~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~-~~~~~~~~  162 (206)
T 1hdo_A           87 MSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP---RLQAVTDDHIRMHKVLRESGLKYVAVMPPHI-GDQPLTGA  162 (206)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG---GGHHHHHHHHHHHHHHHHTCSEEEEECCSEE-ECCCCCSC
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc---cchhHHHHHHHHHHHHHhCCCCEEEEeCCcc-cCCCCCcc
Confidence            3788999999999999999999999999976432211   0000112334445555666999999999998 33321110


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      .       .    ..+.+.+.  .+++|++|+|++++.+++++... |++|+++++.
T Consensus       163 ~-------~----~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~~~-g~~~~i~~g~  205 (206)
T 1hdo_A          163 Y-------T----VTLDGRGP--SRVISKHDLGHFMLRCLTTDEYD-GHSTYPSHQY  205 (206)
T ss_dssp             C-------E----EESSSCSS--CSEEEHHHHHHHHHHTTSCSTTT-TCEEEEECCC
T ss_pred             e-------E----ecccCCCC--CCccCHHHHHHHHHHHhcCcccc-ccceeeeccc
Confidence            0       0    01111111  48999999999999999987543 6899999875

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.21  E-value=7.2e-11  Score=93.04  Aligned_cols=132  Identities=13%  Similarity=0.144  Sum_probs=83.4

Q ss_pred             cceEEecc---cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCC--CCCCCCCCCCCCChhHHHHHHHhhCCceEEE
Q 025270            8 FKALFRTN---NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHVQVEKYISENFSNWASF   82 (255)
Q Consensus         8 ~d~~~~~~---~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~--~~~E~~~~~~~~~~y~~ek~~~e~~~~~~il   82 (255)
                      .|.++.+.   .....+.+++++|++.+++|||++||.++|+.....  +..+.....+...+...++.+.+.+++++++
T Consensus        89 ~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~v  168 (236)
T 3qvo_A           89 QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTIL  168 (236)
T ss_dssp             CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEE
T ss_pred             CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEE
Confidence            45555443   112457899999999999999999999999864432  2233322332223344666777789999999


Q ss_pred             ecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC
Q 025270           83 RPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR  153 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~  153 (255)
                      |||.++++.....             . ...........+++.+|+|++++.++.++....+++|+++++.
T Consensus       169 rPg~i~~~~~~~~-------------~-~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          169 RPAWLTDEDIIDY-------------E-LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             EECEEECCSCCCC-------------E-EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             eCCcccCCCCcce-------------E-EeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            9999998753321             0 0111111123589999999999999998874446899999876

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.20  E-value=1.5e-11  Score=97.14  Aligned_cols=119  Identities=19%  Similarity=0.213  Sum_probs=81.0

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCc-eEEEecCcccCCCCCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-WASFRPQYMIGSGNNKD   95 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~-~~ilRp~~v~G~~~~~~   95 (255)
                      |+.++.+++++|++.++++||++||.++|+...         ..+..+|.+.|.++.+.+++ ++++||+.+||+.....
T Consensus       108 n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~---------~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~  178 (242)
T 2bka_A          108 DRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN---------FLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESR  178 (242)
T ss_dssp             HTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS---------SHHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGS
T ss_pred             eHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc---------chHHHHHHHHHHHHHhcCCCCeEEEcCceecCCCCCCc
Confidence            388999999999999999999999998886311         01122444555566666884 99999999999865433


Q ss_pred             cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           96 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        96 ~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      ....+........+ ..++    ...+++++|+|++++.++.++..  ++.+++.+
T Consensus       179 ~~~~~~~~~~~~~~-~~~~----~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~~  227 (242)
T 2bka_A          179 PGEWLVRKFFGSLP-DSWA----SGHSVPVVTVVRAMLNNVVRPRD--KQMELLEN  227 (242)
T ss_dssp             HHHHHHHHHHCSCC-TTGG----GGTEEEHHHHHHHHHHHHTSCCC--SSEEEEEH
T ss_pred             HHHHHHHHhhcccC-cccc----CCcccCHHHHHHHHHHHHhCccc--cCeeEeeH
Confidence            22333333333222 1111    23489999999999999998765  36666543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.05  E-value=1.6e-10  Score=93.17  Aligned_cols=141  Identities=9%  Similarity=0.012  Sum_probs=96.3

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++..    .+.++||++||...+.....           ....|+.+|...+         
T Consensus       118 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------~~~~Y~~sK~a~~~~~~~la~e  184 (278)
T 2bgk_A          118 FKRVMDIN--VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-----------VSHVYTATKHAVLGLTTSLCTE  184 (278)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-----------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-----------CCcchHHHHHHHHHHHHHHHHH
Confidence            44455566  8888888888875    35679999999888754220           1245666665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                         .+++++++|||.++++......  ...+...+....+       .....+++++|+|++++.++..... ..|++|+
T Consensus       185 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  257 (278)
T 2bgk_A          185 LGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-------NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLV  257 (278)
T ss_dssp             HGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-------SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc-------ccccccCCHHHHHHHHHHHcCcccccCCCCEEE
Confidence               3899999999999998654321  1222333322211       1123478999999999999975432 3478999


Q ss_pred             ecCCCccCHHHHHHHHHHHh
Q 025270          149 LVSDRAVTLDGMAKLCAQAA  168 (255)
Q Consensus       149 i~~~~~~s~~el~~~i~~~~  168 (255)
                      +.+|..+++.|+++.+.+.+
T Consensus       258 v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          258 IDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             ESTTGGGCCTHHHHHSCSCC
T ss_pred             ECCcccccCCccchhhhhhc
Confidence            99999999999998886543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.97  E-value=1.2e-10  Score=92.51  Aligned_cols=143  Identities=7%  Similarity=-0.042  Sum_probs=87.0

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCC-CCC-------CCCCC------CCCCCChhHHH
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADE-PPH-------VEGDV------VKPDAGHVQVE   69 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~-~~~-------~E~~~------~~~~~~~y~~e   69 (255)
                      ++..++.|  +.++.+++++|...    +.+++|++||..+|+.... .+.       +|+.+      ..+..+.|+.+
T Consensus        79 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  156 (255)
T 2dkn_A           79 SGLVVAVN--YFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGS  156 (255)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHH
Confidence            34444555  89999999987754    5689999999998865311 110       01100      00122457766


Q ss_pred             HHHHh------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           70 KYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        70 k~~~e------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                      |...+            .+++++++|||.++|+...     .++.....+....... + ....+++++|+|++++.++.
T Consensus       157 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~-----~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~  229 (255)
T 2dkn_A          157 KYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ-----ASKADPRYGESTRRFV-A-PLGRGSEPREVAEAIAFLLG  229 (255)
T ss_dssp             HHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-----HHHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-----hcccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHHHHhC
Confidence            65432            3799999999999986321     1111100000011111 2 33468999999999999998


Q ss_pred             CCCc-CCCCEEEecCCCccCHHH
Q 025270          138 NPEA-ASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus       138 ~~~~-~~~~~~~i~~~~~~s~~e  159 (255)
                      .+.. ..|++|++.+|..++++|
T Consensus       230 ~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          230 PQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             GGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CCcccceeeEEEecCCeEeeeec
Confidence            6532 346899999987766554

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.94  E-value=1.2e-09  Score=85.09  Aligned_cols=132  Identities=9%  Similarity=0.062  Sum_probs=85.2

Q ss_pred             ccceEEecc--cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCC---CCC-CCCCChhHHHHHHHhhCCceE
Q 025270            7 KFKALFRTN--NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG---DVV-KPDAGHVQVEKYISENFSNWA   80 (255)
Q Consensus         7 ~~d~~~~~~--~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~---~~~-~~~~~~y~~ek~~~e~~~~~~   80 (255)
                      ..|.++.+.  .|+. ++++++++++.+++|||++||.++|+..... ..+.   ... .+..+|...++++++.+++++
T Consensus        73 ~~d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~  150 (221)
T 3r6d_A           73 NAEVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWTFDNLPISYVQGERQARNVLRESNLNYT  150 (221)
T ss_dssp             TCSEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEE
T ss_pred             CCCEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccccccccccHHHHHHHHHHHHHHhCCCCEE
Confidence            346666554  2566 8999999999999999999999988753211 0000   000 112234556666677799999


Q ss_pred             EEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHh--cCCCcCCCCEEEecCCC
Q 025270           81 SFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV--ENPEAASSNIFNLVSDR  153 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l--~~~~~~~~~~~~i~~~~  153 (255)
                      ++|||.++++.....             .............+++.+|+|++++.++  .++....++.+.+.++.
T Consensus       151 ~vrpg~v~~~~~~~~-------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          151 ILRLTWLYNDPEXTD-------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             EEEECEEECCTTCCC-------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             EEechhhcCCCCCcc-------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            999999999732221             0001111111224899999999999999  77765445778887654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.92  E-value=6.9e-10  Score=88.24  Aligned_cols=127  Identities=10%  Similarity=0.123  Sum_probs=85.8

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++.    +.+.++||++||...+....            ....|+.+|...+         
T Consensus       111 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~~~~  176 (255)
T 1fmc_A          111 FRRAYELN--VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI------------NMTSYASSKAAASHLVRNMAFD  176 (255)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC------------CCcccHHHHHHHHHHHHHHHHH
Confidence            34455556  888888888875    44678999999988765321            1246776665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.+.++|||.++++.......+.+...+..+.++         ..+++++|+|+++..++..... ..|++|++.
T Consensus       177 ~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  247 (255)
T 1fmc_A          177 LGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLCSPAASWVSGQILTVS  247 (255)
T ss_dssp             HHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHHhCCccccCCCcEEEEC
Confidence               278999999999998743222223444444444321         2367999999999999975433 346899999


Q ss_pred             CCCccCH
Q 025270          151 SDRAVTL  157 (255)
Q Consensus       151 ~~~~~s~  157 (255)
                      +|...|+
T Consensus       248 gg~~~s~  254 (255)
T 1fmc_A          248 GGGVQEL  254 (255)
T ss_dssp             TTSCCCC
T ss_pred             CceeccC
Confidence            9987664

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.90  E-value=6.6e-10  Score=89.82  Aligned_cols=146  Identities=14%  Similarity=0.046  Sum_probs=93.3

Q ss_pred             cccceEEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      ..++.++++|  +.+    ++.++..+++.+..+||++||...+...            +..+.|+.+|...+       
T Consensus       101 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  166 (281)
T 3m1a_A          101 RELRDLFELH--VFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF------------AGFSAYSATKAALEQLSEGLA  166 (281)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC------------CCchHHHHHHHHHHHHHHHHH
Confidence            3445556666  888    6666666677777899999997765321            12356777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  143 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  143 (255)
                           .++++.++|||.|.++.....      ....+.........+..   ......+++++|+|++++.+++++..  
T Consensus       167 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~a~~~~~~~~~~--  241 (281)
T 3m1a_A          167 DEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQ---GSDGSQPGDPAKAAAAIRLALDTEKT--  241 (281)
T ss_dssp             HHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHH---C-----CBCHHHHHHHHHHHHHSSSC--
T ss_pred             HHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHh---hccCCCCCCHHHHHHHHHHHHhCCCC--
Confidence                 389999999999987643221      11122222211111111   12234578899999999999998765  


Q ss_pred             CCEEEecCCCccCHHHHHHHHHHHhCC
Q 025270          144 SNIFNLVSDRAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus       144 ~~~~~i~~~~~~s~~el~~~i~~~~g~  170 (255)
                      +..|+++++....+.+....+.+.++.
T Consensus       242 ~~~~~l~s~~~~~i~g~~~~i~~~~~~  268 (281)
T 3m1a_A          242 PLRLALGGDAVDFLTGHLDSVRAELTE  268 (281)
T ss_dssp             CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence            589999988777778888777776653

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.83  E-value=1.8e-09  Score=85.34  Aligned_cols=124  Identities=15%  Similarity=0.136  Sum_probs=82.1

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.++.++++++...    + .++||++||...+....            ....|+.+|...+        
T Consensus       100 ~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~a~  165 (244)
T 1cyd_A          100 FDRSFSVN--LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP------------NLITYSSTKGAMTMLTKAMAM  165 (244)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhh--hHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC------------CcchhHHHHHHHHHHHHHHHH
Confidence            34445555  88888888887653    4 57899999988775321            1245666665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.++||+.++++..... ....++..+..+.+         .+.+++++|+|++++.++..... ..|+.++
T Consensus       166 ~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  236 (244)
T 1cyd_A          166 ELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP---------LRKFAEVEDVVNSILFLLSDRSASTSGGGIL  236 (244)
T ss_dssp             HHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEE
T ss_pred             HhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC---------ccCCCCHHHHHHHHHHHhCchhhcccCCEEE
Confidence                378999999999998743211 11233344333321         24689999999999999986543 3468899


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       237 v~gG~~  242 (244)
T 1cyd_A          237 VDAGYL  242 (244)
T ss_dssp             ESTTGG
T ss_pred             ECCCcc
Confidence            888754

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.82  E-value=8.8e-10  Score=84.82  Aligned_cols=102  Identities=8%  Similarity=-0.069  Sum_probs=72.4

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      +.++..++.|  +.++.++++++++.+.++||++||...|....            ....|+.+|...+           
T Consensus        88 ~~~~~~~~~n--~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~~~~~~  153 (207)
T 2yut_A           88 DLVEEMLAAH--LLTAAFVLKHARFQKGARAVFFGAYPRYVQVP------------GFAAYAAAKGALEAYLEAARKELL  153 (207)
T ss_dssp             CHHHHHHHHH--HHHHHHHHHHCCEEEEEEEEEECCCHHHHSST------------TBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------CcchHHHHHHHHHHHHHHHHHHHh
Confidence            3445555666  99999999999777788999999988774321            1245666654322           


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                       .+++++++|||.++++...                    +.+.....+++++|+|++++.+++++..
T Consensus       154 ~~gi~v~~v~pg~v~t~~~~--------------------~~~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          154 REGVHLVLVRLPAVATGLWA--------------------PLGGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             TTTCEEEEECCCCBCSGGGG--------------------GGTSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             hhCCEEEEEecCcccCCCcc--------------------ccCCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence             3899999999999886411                    1122335789999999999999987764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.70  E-value=1.4e-08  Score=81.83  Aligned_cols=139  Identities=12%  Similarity=0.094  Sum_probs=81.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC----CcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.++.++++|  +.++.++++++...    + .++|++||... +...            +....|+.+|...+      
T Consensus       112 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l  176 (278)
T 1spx_A          112 ESYDATLNLN--LRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------------PDFPYYSIAKAAIDQYTRNT  176 (278)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC------------TTSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC------------CCccHHHHHHHHHHHHHHHH
Confidence            3455566666  88888888887753    5 79999999765 4321            11245776665332      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCc--HHHH------HHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDC--EEWF------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~--~~~~------~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                            .++.+.++|||.|.++......  ....      ...+....    +     ...+++.+|+|++++.++..+.
T Consensus       177 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----p-----~~~~~~~~dvA~~v~~l~s~~~  247 (278)
T 1spx_A          177 AIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV----P-----AGVMGQPQDIAEVIAFLADRKT  247 (278)
T ss_dssp             HHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC----T-----TSSCBCHHHHHHHHHHHHCHHH
T ss_pred             HHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC----C-----CcCCCCHHHHHHHHHHHcCccc
Confidence                  3899999999999987533210  0001      11111111    1     1237899999999999987543


Q ss_pred             c--CCCCEEEecCCCccCHHHHHHHHHHHh
Q 025270          141 A--ASSNIFNLVSDRAVTLDGMAKLCAQAA  168 (255)
Q Consensus       141 ~--~~~~~~~i~~~~~~s~~el~~~i~~~~  168 (255)
                      .  ..|+++++.+|..+++.++++.+.+.+
T Consensus       248 ~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          248 SSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HTTCCSCEEEESTTGGGC------------
T ss_pred             cCcccCcEEEECCCcccccCcccccHHHHh
Confidence            2  347899999999999999999988754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.68  E-value=1.3e-08  Score=81.41  Aligned_cols=124  Identities=13%  Similarity=0.127  Sum_probs=68.2

Q ss_pred             cceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++    ++.+.++||++||...+....            ....|+.+|...+         
T Consensus       116 ~~~~~~~n--~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e  181 (266)
T 1xq1_A          116 FSFHISTN--LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS------------VGSIYSATKGALNQLARNLACE  181 (266)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHHHHHHSSCEEEEEC----------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC------------CCchHHHHHHHHHHHHHHHHHH
Confidence            34445556  88999998888    455678999999987654211            1256776665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.++++|||.++++.........+...+...         .....+++.+|+|+++..++..... ..|+++++.
T Consensus       182 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  252 (266)
T 1xq1_A          182 WASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVD  252 (266)
T ss_dssp             HGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECC
T ss_pred             HhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEc
Confidence               289999999999999864331111111111111         1112478999999999999875432 346899999


Q ss_pred             CCCc
Q 025270          151 SDRA  154 (255)
Q Consensus       151 ~~~~  154 (255)
                      +|..
T Consensus       253 gG~~  256 (266)
T 1xq1_A          253 GGLT  256 (266)
T ss_dssp             CCEE
T ss_pred             CCcc
Confidence            8864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.65  E-value=3.6e-09  Score=86.27  Aligned_cols=140  Identities=11%  Similarity=0.047  Sum_probs=89.4

Q ss_pred             cceEEecccCcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.++.++++++..     .+..+||++||...+....            ....|+.+|...+        
T Consensus       128 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  193 (302)
T 1w6u_A          128 WKTITDIV--LNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG------------FVVPSASAKAGVEAMSKSLAA  193 (302)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC------------CcchhHHHHHHHHHHHHHHHH
Confidence            34445555  8888888777753     3457899999987654311            1245666665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                          .++.++++|||.++++......  .......+..+.+         ...+++++|+|++++.++..... ..|++|
T Consensus       194 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  264 (302)
T 1w6u_A          194 EWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP---------CGRLGTVEELANLAAFLCSDYASWINGAVI  264 (302)
T ss_dssp             HHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCCcccccCCCEE
Confidence                3789999999999987422111  0111122222221         12378899999999999975433 246899


Q ss_pred             EecCCCccCHHHHHHHHHHHhCC
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~  170 (255)
                      ++.+|..++++++++.+.+..|.
T Consensus       265 ~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          265 KFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             EESTTHHHHHHSTTGGGGGCCHH
T ss_pred             EECCCeeeccCCccccchhhccc
Confidence            99999888888888887766554

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.64  E-value=9.8e-09  Score=82.94  Aligned_cols=144  Identities=14%  Similarity=0.113  Sum_probs=97.0

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++...    +-.+||++||...+....            ....|+.+|...+       
T Consensus       114 ~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~la  179 (281)
T 3svt_A          114 EAWRRTVDLN--VNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR------------WFGAYGVTKSAVDHLMQLAA  179 (281)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT------------TCTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC------------CChhHHHHHHHHHHHHHHHH
Confidence            3455566677  89998888887653    334899999987764321            1256777775433       


Q ss_pred             -----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                           .++.+..++||.|+++..... ....+...+....+         ...+.+++|+|++++.++..... ..|+++
T Consensus       180 ~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~l~s~~~~~itG~~~  250 (281)
T 3svt_A          180 DELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP---------LPRQGEVEDVANMAMFLLSDAASFVTGQVI  250 (281)
T ss_dssp             HHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS---------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccCCCCCCEE
Confidence                 268999999999988643211 01112222222221         12356899999999999986543 347999


Q ss_pred             EecCCCccC-HHHHHHHHHHHhCCCC
Q 025270          148 NLVSDRAVT-LDGMAKLCAQAAGLPV  172 (255)
Q Consensus       148 ~i~~~~~~s-~~el~~~i~~~~g~~~  172 (255)
                      ++.+|...+ ..++++.+.+.+|.+.
T Consensus       251 ~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          251 NVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             EESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             EeCCChhcccCCcchhccccccCCcc
Confidence            999998776 7889999999888653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.61  E-value=3.7e-08  Score=77.68  Aligned_cols=124  Identities=10%  Similarity=0.116  Sum_probs=80.2

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.++.++++++...    + ..++|++||...+....            ..+.|+.+|...+        
T Consensus       100 ~~~~~~~N--~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  165 (244)
T 3d3w_A          100 FDRSFEVN--LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT------------NHSVYCSTKGALDMLTKVMAL  165 (244)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC------------CCchHHHHHHHHHHHHHHHHH
Confidence            44455556  88888888877653    4 57899999987664311            2255776665433        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.++|||.++++..... ........+..+.         ....+++++|+|++++.++..... ..|++|+
T Consensus       166 e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  236 (244)
T 3d3w_A          166 ELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---------PLGKFAEVEHVVNAILFLLSDRSGMTTGSTLP  236 (244)
T ss_dssp             HHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCccccCCCCCEEE
Confidence                278999999999998753210 0011222222221         123578999999999999975432 3468999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       237 v~gG~~  242 (244)
T 3d3w_A          237 VEGGFW  242 (244)
T ss_dssp             ESTTGG
T ss_pred             ECCCcc
Confidence            998754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.59  E-value=8.2e-08  Score=76.39  Aligned_cols=125  Identities=9%  Similarity=0.045  Sum_probs=81.5

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++..    .+..++|++||...+......          +...|+.+|...+         
T Consensus       115 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----------~~~~Y~~sK~a~~~~~~~l~~e  182 (260)
T 3awd_A          115 WLKQVDIN--LNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ----------QQAAYNASKAGVHQYIRSLAAE  182 (260)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS----------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc--cHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC----------CccccHHHHHHHHHHHHHHHHH
Confidence            34455556  8888888888764    356799999997755321110          1145776665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .+++++++|||.++++..... ....+...+..+.+         ...+++.+|+|+++..++..... ..|++|++
T Consensus       183 ~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  253 (260)
T 3awd_A          183 WAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP---------MGRVGQPDEVASVVQFLASDAASLMTGAIVNV  253 (260)
T ss_dssp             HGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCchhccCCCcEEEE
Confidence               489999999999999865411 11233333333322         12378999999999999975432 34689999


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       254 ~gg~  257 (260)
T 3awd_A          254 DAGF  257 (260)
T ss_dssp             STTT
T ss_pred             CCce
Confidence            9875

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.58  E-value=2.6e-08  Score=76.27  Aligned_cols=105  Identities=7%  Similarity=0.016  Sum_probs=71.7

Q ss_pred             ceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      +..++.|  +.++.++++++...   + ++||++||...+....            ....|+.+|...+           
T Consensus        83 ~~~~~~n--~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~------------~~~~Y~~sK~~~~~~~~~~~~e~~  147 (202)
T 3d7l_A           83 AVTISSK--LGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIV------------QGASAAMANGAVTAFAKSAAIEMP  147 (202)
T ss_dssp             HHHHHTT--THHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHTTSCS
T ss_pred             HHHHhhc--cHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCC------------ccHHHHHHHHHHHHHHHHHHHHcc
Confidence            3444555  99999999999876   4 6899999977653211            1245666654432           


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEe
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  149 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i  149 (255)
                      .+++++++||+.++++..          ..  +       ++...+++++++|+|++++.++.....  |++||+
T Consensus       148 ~gi~v~~v~pg~v~~~~~----------~~--~-------~~~~~~~~~~~~dva~~~~~~~~~~~~--G~~~~v  201 (202)
T 3d7l_A          148 RGIRINTVSPNVLEESWD----------KL--E-------PFFEGFLPVPAAKVARAFEKSVFGAQT--GESYQV  201 (202)
T ss_dssp             TTCEEEEEEECCBGGGHH----------HH--G-------GGSTTCCCBCHHHHHHHHHHHHHSCCC--SCEEEE
T ss_pred             CCeEEEEEecCccCCchh----------hh--h-------hhccccCCCCHHHHHHHHHHhhhcccc--CceEec
Confidence            278999999999998631          11  0       112235689999999999998854332  678886

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.57  E-value=1.3e-07  Score=74.84  Aligned_cols=123  Identities=9%  Similarity=0.010  Sum_probs=79.0

Q ss_pred             cceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++    ++.+.+++|++||...+....            ....|+.+|...+         
T Consensus       107 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l~~e  172 (250)
T 2cfc_A          107 FDKVMAVN--VRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP------------GRSAYTTSKGAVLQLTKSVAVD  172 (250)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC------------CchhHHHHHHHHHHHHHHHHHH
Confidence            44455556  77776555554    445778999999987664321            1256776665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .+++++++|||.++++..... ....+...+..+.+         ...+.+.+|+|++++.++..+.. ..|+++++
T Consensus       173 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  243 (250)
T 2cfc_A          173 YAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP---------QKEIGTAAQVADAVMFLAGEDATYVNGAALVM  243 (250)
T ss_dssp             HGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEE
T ss_pred             hcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhhcccCCEEEE
Confidence               289999999999999864321 11223333333221         12367999999999999986543 34689999


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       244 ~gG~  247 (250)
T 2cfc_A          244 DGAY  247 (250)
T ss_dssp             STTG
T ss_pred             CCce
Confidence            8875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.55  E-value=6.3e-09  Score=83.06  Aligned_cols=136  Identities=14%  Similarity=0.119  Sum_probs=85.6

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .+.++.++++|  +.++.++++++...    + -.++|++||...+....            ....|+.+|...+     
T Consensus       103 ~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~  168 (259)
T 4e6p_A          103 RESYEKLFAIN--VAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA------------LVAIYCATKAAVISLTQS  168 (259)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC------------CChHHHHHHHHHHHHHHH
Confidence            34455566667  99999999888643    2 35899999987653211            1256777775433     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHc---CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR---KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                             .++.+..++||.|+++....  ...++.....   +......+++.....+.+++|+|++++.++..... ..
T Consensus       169 la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~it  246 (259)
T 4e6p_A          169 AGLDLIKHRINVNAIAPGVVDGEHWDG--VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIV  246 (259)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCSTTHHH--HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCC
T ss_pred             HHHHhhhcCCEEEEEEECCCccchhhh--hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCC
Confidence                   27999999999999875321  1111111111   11111112223345689999999999998875433 34


Q ss_pred             CCEEEecCCCccC
Q 025270          144 SNIFNLVSDRAVT  156 (255)
Q Consensus       144 ~~~~~i~~~~~~s  156 (255)
                      |+++++.+|..+|
T Consensus       247 G~~i~vdgG~~~s  259 (259)
T 4e6p_A          247 SQTYNVDGGNWMS  259 (259)
T ss_dssp             SCEEEESTTSSCC
T ss_pred             CCEEEECcChhcC
Confidence            7999999987554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.55  E-value=4.8e-08  Score=77.92  Aligned_cols=129  Identities=11%  Similarity=0.066  Sum_probs=77.3

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++..++.|  +.++.++++++...    + ..+||++||...+...            +....|+.+|...+       
T Consensus       115 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  180 (264)
T 2pd6_A          115 DWDKVIAVN--LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN------------VGQTNYAASKAGVIGLTQTAA  180 (264)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC------------TTBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhc--cHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC------------CCChhhHHHHHHHHHHHHHHH
Confidence            344455566  88999999888754    3 4689999997644221            11256776665322       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .+++++++|||.++++.... ....+...+..+.         ....+++.+|+|+++..++..... ..|+.++
T Consensus       181 ~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  250 (264)
T 2pd6_A          181 RELGRHGIRCNSVLPGFIATPMTQK-VPQKVVDKITEMI---------PMGHLGDPEDVADVVAFLASEDSGYITGTSVE  250 (264)
T ss_dssp             HHHGGGTEEEEEEEECSBCSCC-----------CTGGGC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhhcCeEEEEEeeecccccchhh-cCHHHHHHHHHhC---------CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEE
Confidence                 38999999999999986432 1111111111111         112468999999999999875432 3468999


Q ss_pred             ecCCCccCHHH
Q 025270          149 LVSDRAVTLDG  159 (255)
Q Consensus       149 i~~~~~~s~~e  159 (255)
                      +.+|..++...
T Consensus       251 v~gg~~~~~~~  261 (264)
T 2pd6_A          251 VTGGLFMAENL  261 (264)
T ss_dssp             ESTTC------
T ss_pred             ECCCceecccc
Confidence            99887665443

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.55  E-value=6.7e-08  Score=77.49  Aligned_cols=122  Identities=14%  Similarity=0.095  Sum_probs=78.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhC---CcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++...   + ++||++||...+ ....            ....|+.+|...+         
T Consensus       123 ~~~~~~~n--~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~~~e  187 (274)
T 1ja9_A          123 FDKVFNLN--TRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIP------------NHALYAGSKAAVEGFCRAFAVD  187 (274)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCC------------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCC------------CCchHHHHHHHHHHHHHHHHHH
Confidence            34455556  99999998888764   4 689999998876 3211            1245666665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCC-----------CcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNK-----------DCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~-----------~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                         .++.++++|||.++++....           ... ..+......+         .....+++++|+|++++.++..+
T Consensus       188 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~  258 (274)
T 1ja9_A          188 CGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM---------NPLKRIGYPADIGRAVSALCQEE  258 (274)
T ss_dssp             HGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred             hhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhCcc
Confidence               28999999999998753210           000 1111111111         22345889999999999999865


Q ss_pred             Cc-CCCCEEEecCCC
Q 025270          140 EA-ASSNIFNLVSDR  153 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~  153 (255)
                      .. ..|++|++.+|.
T Consensus       259 ~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          259 SEWINGQVIKLTGGG  273 (274)
T ss_dssp             GTTCCSCEEEESTTC
T ss_pred             cccccCcEEEecCCc
Confidence            33 246899998874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.54  E-value=2.1e-07  Score=74.65  Aligned_cols=126  Identities=14%  Similarity=0.091  Sum_probs=85.0

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++    ++.+..++|++||...+....            ....|+.+|...+      
T Consensus       108 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  173 (271)
T 3tzq_B          108 VDVWDDTFTVN--ARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD------------MSTAYACTKAAIETLTRYV  173 (271)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS------------SCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC------------CChHHHHHHHHHHHHHHHH
Confidence            34455666777  99999999988    566677999999987664311            2256777775433      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            +++.+..++||.|+++.........+...+....+         ...+...+|+|+++..++..... ..|+++
T Consensus       174 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i  244 (271)
T 3tzq_B          174 ATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHL---------AGRIGEPHEIAELVCFLASDRAAFITGQVI  244 (271)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccCCcCCCEE
Confidence                  38999999999999986553222223333332221         12267899999999999986543 357999


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      ++.+|.
T Consensus       245 ~vdGG~  250 (271)
T 3tzq_B          245 AADSGL  250 (271)
T ss_dssp             EESTTT
T ss_pred             EECCCc
Confidence            999884

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.54  E-value=7.1e-08  Score=75.83  Aligned_cols=126  Identities=10%  Similarity=0.035  Sum_probs=82.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----C------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----G------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      .++..++.|  +.++.++++++...    +      ..+||++||...+....            ....|+.+|...+  
T Consensus        93 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~  158 (242)
T 1uay_A           93 SFRRVLEVN--LLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------------GQAAYAASKGGVVAL  158 (242)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC------------CCchhhHHHHHHHHH
Confidence            445555666  99999999988753    1      23899999988775321            1256776664322  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCC
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS  144 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  144 (255)
                                .++.++++|||.++++.... ....+...+..+.+  +.      ..+++++|+|++++.++.. ....|
T Consensus       159 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~--~~------~~~~~~~dva~~~~~l~~~-~~~~G  228 (242)
T 1uay_A          159 TLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVP--FP------PRLGRPEEYAALVLHILEN-PMLNG  228 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCC--SS------CSCCCHHHHHHHHHHHHHC-TTCCS
T ss_pred             HHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHHHhhCC--Cc------ccCCCHHHHHHHHHHHhcC-CCCCC
Confidence                      27999999999999874322 11222333333222  11      2378999999999999987 33347


Q ss_pred             CEEEecCCCccC
Q 025270          145 NIFNLVSDRAVT  156 (255)
Q Consensus       145 ~~~~i~~~~~~s  156 (255)
                      +.|++.+|..++
T Consensus       229 ~~~~v~gG~~~~  240 (242)
T 1uay_A          229 EVVRLDGALRMA  240 (242)
T ss_dssp             CEEEESTTCCCC
T ss_pred             cEEEEcCCeecC
Confidence            899999886543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=98.53  E-value=1.5e-07  Score=74.47  Aligned_cols=126  Identities=7%  Similarity=0.062  Sum_probs=86.5

Q ss_pred             CccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++    ++.+..++|++||...+....            ....|+.+|...+     
T Consensus       102 ~~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~  167 (246)
T 3osu_A          102 KEQEWDDVIDTN--LKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP------------GQANYVATKAGVIGLTKS  167 (246)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC------------CChHHHHHHHHHHHHHHH
Confidence            344556667777  99999999988    455667999999976553211            1256777775322     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+..++||.+.++.... ....+...+..+.++         ..+.+.+|+|+++..++..... ..|++
T Consensus       168 la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~l~s~~~~~itG~~  237 (246)
T 3osu_A          168 AARELASRGITVNAVAPGFIVSDMTDA-LSDELKEQMLTQIPL---------ARFGQDTDIANTVAFLASDKAKYITGQT  237 (246)
T ss_dssp             HHHHHGGGTEEEEEEEECSBGGGCCSC-SCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHhcccCeEEEEEEECCCcCCcccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence                   37999999999999876443 233444444443322         2356889999999999986543 34799


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +++.+|.
T Consensus       238 i~vdgG~  244 (246)
T 3osu_A          238 IHVNGGM  244 (246)
T ss_dssp             EEESTTS
T ss_pred             EEeCCCc
Confidence            9999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.51  E-value=6.5e-08  Score=77.26  Aligned_cols=129  Identities=9%  Similarity=0.055  Sum_probs=81.8

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+       
T Consensus       107 ~~~~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la  172 (263)
T 3ai3_A          107 EKWQFYWELL--VMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW------------YEPIYNVTKAALMMFSKTLA  172 (263)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC------------CcchHHHHHHHHHHHHHHHH
Confidence            3445555666  888877777764    34678999999988775321            1245776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCc----------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                           .++++.++|||.|+++......          ...+...+..+.        .....+++++|+|++++.++...
T Consensus       173 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~~~~l~s~~  244 (263)
T 3ai3_A          173 TEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------APIKRFASPEELANFFVFLCSER  244 (263)
T ss_dssp             HHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCBCHHHHHHHHHHHTSTT
T ss_pred             HHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHcCcc
Confidence                 3899999999999987422100          011111111110        11134789999999999999865


Q ss_pred             Cc-CCCCEEEecCCCccC
Q 025270          140 EA-ASSNIFNLVSDRAVT  156 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~~~s  156 (255)
                      .. ..|++|++.+|...|
T Consensus       245 ~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          245 ATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CTTCCSCEEEESTTCCCC
T ss_pred             ccCCCCcEEEECCCcccc
Confidence            43 347899999887554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.50  E-value=3.2e-08  Score=79.86  Aligned_cols=139  Identities=8%  Similarity=0.017  Sum_probs=85.9

Q ss_pred             CccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+     
T Consensus       119 ~~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~  184 (281)
T 3s55_A          119 ESAQWDEVIGTN--LTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF------------AQASYVSSKWGVIGLTKC  184 (281)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC------------CCchhHHHHHHHHHHHHH
Confidence            344556666777  999999888863    34557899999987664321            1256777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCe-----eccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-----PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                             .++.+..++||.|+++..........+.........     .+.........+.+.+|+|++++.++..... 
T Consensus       185 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~  264 (281)
T 3s55_A          185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSH  264 (281)
T ss_dssp             HHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccC
Confidence                   379999999999999865432100000000000000     0000112225688999999999999986543 


Q ss_pred             CCCCEEEecCCCccC
Q 025270          142 ASSNIFNLVSDRAVT  156 (255)
Q Consensus       142 ~~~~~~~i~~~~~~s  156 (255)
                      ..|+++++.+|...+
T Consensus       265 itG~~i~vdgG~~~~  279 (281)
T 3s55_A          265 ITGTVLPIDAGATAR  279 (281)
T ss_dssp             CCSCEEEESTTGGGG
T ss_pred             CCCCEEEECCCcccC
Confidence            347999999987544

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.49  E-value=1.5e-07  Score=75.06  Aligned_cols=125  Identities=8%  Similarity=0.046  Sum_probs=82.1

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++    ++.+..++|++||...+.....          +....|+.+|...+      
T Consensus       117 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------~~~~~Y~~sKaa~~~l~~~l  184 (260)
T 3un1_A          117 QEDYDHNLGVN--VAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVG----------MPSALASLTKGGLNAVTRSL  184 (260)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTT----------CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCC----------CccHHHHHHHHHHHHHHHHH
Confidence            34455666667  99999999887    4566789999999776543211          11245666665432      


Q ss_pred             ---h---CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ---N---FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ---~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                         .   ++.+..++||.|+++......    ...+....         ....+.+++|+|++++.+.+.. ...|++++
T Consensus       185 a~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~---------p~~r~~~~~dva~av~~L~~~~-~itG~~i~  250 (260)
T 3un1_A          185 AMEFSRSGVRVNAVSPGVIKTPMHPAET----HSTLAGLH---------PVGRMGEIRDVVDAVLYLEHAG-FITGEILH  250 (260)
T ss_dssp             HHHTTTTTEEEEEEEECCBCCTTSCGGG----HHHHHTTS---------TTSSCBCHHHHHHHHHHHHHCT-TCCSCEEE
T ss_pred             HHHhCcCCeEEEEEeecCCCCCCCCHHH----HHHHhccC---------CCCCCcCHHHHHHHHHHhcccC-CCCCcEEE
Confidence               2   789999999999998654321    11122111         1234678999999999985433 23479999


Q ss_pred             ecCCCcc
Q 025270          149 LVSDRAV  155 (255)
Q Consensus       149 i~~~~~~  155 (255)
                      +.+|...
T Consensus       251 vdGG~~~  257 (260)
T 3un1_A          251 VDGGQNA  257 (260)
T ss_dssp             ESTTGGG
T ss_pred             ECCCeec
Confidence            9988644

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.48  E-value=6.9e-08  Score=76.08  Aligned_cols=121  Identities=7%  Similarity=0.068  Sum_probs=76.3

Q ss_pred             cceEEecccCccc----HHHHHHHHhhCCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.+    ++.++..+++.+.++||++||...+ +..             ....|..+|...+        
T Consensus       104 ~~~~~~~n--~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------~~~~Y~~sK~a~~~~~~~la~  168 (245)
T 2ph3_A          104 WEAVLEAN--LSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP-------------GQANYVASKAGLIGFTRAVAK  168 (245)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-------------SBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhc--cHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-------------CCcchHHHHHHHHHHHHHHHH
Confidence            34445555  777    5555556666677899999997643 321             1245776665322        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .+++++++|||.++++.... ....+...+..+.+         ...+++++|+|+++..++..+.. ..|++|++
T Consensus       169 e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  238 (245)
T 2ph3_A          169 EYAQRGITVNAVAPGFIETEMTER-LPQEVKEAYLKQIP---------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCV  238 (245)
T ss_dssp             HHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccccccCCEEEE
Confidence                27999999999998864221 11222222222211         12478999999999999976432 34689999


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       239 ~gg~  242 (245)
T 2ph3_A          239 DGGL  242 (245)
T ss_dssp             STTC
T ss_pred             CCCC
Confidence            8875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.46  E-value=2.6e-07  Score=74.58  Aligned_cols=135  Identities=13%  Similarity=0.044  Sum_probs=80.3

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++    ++.+..++|++||...+....            ....|+.+|...+      
T Consensus       125 ~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  190 (281)
T 3v2h_A          125 VEQWDRIIAVN--LSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP------------FKSAYVAAKHGIMGLTKTV  190 (281)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC------------CchHHHHHHHHHHHHHHHH
Confidence            34455566667  99999988887    444567899999977653211            2256777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHH-HHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWF-FDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                            .++.+..++||.|.++.......... ......... ......+.....+++++|+|++++.++..... ..|+
T Consensus       191 a~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~  270 (281)
T 3v2h_A          191 ALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGT  270 (281)
T ss_dssp             HHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSC
T ss_pred             HHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCc
Confidence                  27999999999999875432110000 000000000 01122334445689999999999999986643 3579


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      ++++.+|.
T Consensus       271 ~i~vdGG~  278 (281)
T 3v2h_A          271 HVSMDGGW  278 (281)
T ss_dssp             EEEESTTG
T ss_pred             EEEECCCc
Confidence            99998875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.43  E-value=2.3e-07  Score=73.80  Aligned_cols=130  Identities=12%  Similarity=0.087  Sum_probs=84.5

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+      
T Consensus       109 ~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~l  174 (256)
T 3gaf_A          109 MSDFEWAFKLN--LFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV------------RMASYGSSKAAVNHLTRNI  174 (256)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC------------CchHHHHHHHHHHHHHHHH
Confidence            34455666777  999988888874    44567999999987653211            2356777775433      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            .++.+..++||.|..+.............+....+         ...+.+.+|+|++++.++..... ..|+++
T Consensus       175 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~L~s~~~~~itG~~i  245 (256)
T 3gaf_A          175 AFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTP---------LGRLGEAQDIANAALFLCSPAAAWISGQVL  245 (256)
T ss_dssp             HHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCcccCccCCEE
Confidence                  27899999999997753211111222222322221         12467899999999999975433 357999


Q ss_pred             EecCCCccCH
Q 025270          148 NLVSDRAVTL  157 (255)
Q Consensus       148 ~i~~~~~~s~  157 (255)
                      ++.+|...++
T Consensus       246 ~vdgG~~~~~  255 (256)
T 3gaf_A          246 TVSGGGVQEL  255 (256)
T ss_dssp             EESTTSCCC-
T ss_pred             EECCCccccC
Confidence            9999876654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.43  E-value=1.5e-07  Score=74.63  Aligned_cols=124  Identities=9%  Similarity=0.016  Sum_probs=76.7

Q ss_pred             ceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            9 KALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      +..++.|  +.++.++++++    ++.+.++||++||...+......          +.+.|+.+|...+          
T Consensus       110 ~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~----------~~~~Y~~sK~a~~~~~~~~~~~~  177 (254)
T 2wsb_A          110 RQVMAVN--VDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ----------FASSYMASKGAVHQLTRALAAEW  177 (254)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS----------CBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC----------cchHHHHHHHHHHHHHHHHHHHH
Confidence            4445555  77766655554    45567899999998766432110          1145666665432          


Q ss_pred             --hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        .+++++++|||.++++...... .+.+...+....+         ...+++++|+|++++.++..... ..|+++++.
T Consensus       178 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~  248 (254)
T 2wsb_A          178 AGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAALFLASPAASYVTGAILAVD  248 (254)
T ss_dssp             GGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             hhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence              2799999999999986422100 0122223332221         13478999999999999875432 346899998


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +|.
T Consensus       249 gG~  251 (254)
T 2wsb_A          249 GGY  251 (254)
T ss_dssp             TTG
T ss_pred             CCE
Confidence            774

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.40  E-value=3.4e-07  Score=72.97  Aligned_cols=132  Identities=7%  Similarity=-0.023  Sum_probs=84.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++..+++|  +.++.++++++...  +-.+||++||...+....            ....|+.+|...+        
T Consensus       111 ~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la~  176 (261)
T 2wyu_A          111 RQDWLLALEVS--AYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------------KYNVMAIAKAALEASVRYLAY  176 (261)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHhccCCEEEEEecccccCCCC------------CchHHHHHHHHHHHHHHHHHH
Confidence            33455566667  99999999999875  125899999976553211            1245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.+++||.|+++..... ....+...+....++         ..+.+++|+|++++.++..... ..|++++
T Consensus       177 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~  247 (261)
T 2wyu_A          177 ELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVGNLGLFLLSPLASGITGEVVY  247 (261)
T ss_dssp             HHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcChhhcCCCCCEEE
Confidence                289999999999998753321 122233333222211         1256899999999999875433 3478999


Q ss_pred             ecCCCccCHHH
Q 025270          149 LVSDRAVTLDG  159 (255)
Q Consensus       149 i~~~~~~s~~e  159 (255)
                      +.+|..++..|
T Consensus       248 vdgG~~~~~~~  258 (261)
T 2wyu_A          248 VDAGYHIMGME  258 (261)
T ss_dssp             ESTTGGGBC--
T ss_pred             ECCCccccCCC
Confidence            99887555433

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.39  E-value=2.4e-07  Score=72.97  Aligned_cols=123  Identities=11%  Similarity=0.073  Sum_probs=78.1

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++..++.|  +.++.++++++..    .+..+||++||...+....            ....|+.+|...+        
T Consensus       102 ~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  167 (244)
T 1edo_A          102 QWDEVIDLN--LTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI------------GQANYAAAKAGVIGFSKTAAR  167 (244)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh--hHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC------------CCccchhhHHHHHHHHHHHHH
Confidence            344455556  8898888888865    3667999999976542211            1245776665322        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~  148 (255)
                          .+++++++|||.++++.... ....+...+....+         ...+++.+|+|+++..++..+..  ..|++|+
T Consensus       168 e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~  237 (244)
T 1edo_A          168 EGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP---------LGRTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT---------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HhhhcCCEEEEEeeCccccchhhh-cChHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence                27899999999998864221 11122222222111         12378999999999999854432  3468999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       238 v~gG~  242 (244)
T 1edo_A          238 IDGGI  242 (244)
T ss_dssp             ESTTT
T ss_pred             eCCCc
Confidence            98875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.39  E-value=4.2e-07  Score=72.76  Aligned_cols=129  Identities=12%  Similarity=0.107  Sum_probs=83.8

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++    ++.+..++|++||...+...            +....|+.+|...+      
T Consensus       115 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~l  180 (266)
T 3uxy_A          115 DADWSLSLGVN--VEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG------------PGHALYCLTKAALASLTQCM  180 (266)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC------------CCChHHHHHHHHHHHHHHHH
Confidence            34455666677  99999999988    45566799999997765321            12356777775433      


Q ss_pred             ------hCCceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                            .++.+..++||.|.++.....      ........+...         .....+.+.+|+|++++.++..... 
T Consensus       181 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~~~  251 (266)
T 3uxy_A          181 GMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT---------VPLGRIAEPEDIADVVLFLASDAARY  251 (266)
T ss_dssp             HHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchhcC
Confidence                  279999999999987532110      001111122211         1223478999999999999986543 


Q ss_pred             CCCCEEEecCCCccC
Q 025270          142 ASSNIFNLVSDRAVT  156 (255)
Q Consensus       142 ~~~~~~~i~~~~~~s  156 (255)
                      ..|+++++.+|..++
T Consensus       252 itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          252 LCGSLVEVNGGKAVA  266 (266)
T ss_dssp             CCSCEEEESTTCCCC
T ss_pred             CcCCEEEECcCEeCC
Confidence            357999999887543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.39  E-value=1.9e-07  Score=74.09  Aligned_cols=129  Identities=14%  Similarity=0.132  Sum_probs=57.6

Q ss_pred             cccceEEecccCcccHHHHHH----HHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----hh--
Q 025270            6 AKFKALFRTNNNFRLQRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----EN--   75 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~----aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e~--   75 (255)
                      +.++..+++|  +.++.++.+    .+++.+..+||++||...|...          ..+..+|.+.+.+..    |.  
T Consensus       111 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~Y~asK~a~~~~~~~la~e~~~  178 (253)
T 3qiv_A          111 EYYKKFMSVN--LDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS----------NYYGLAKVGINGLTQQLSRELGG  178 (253)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------CCHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC----------chhHHHHHHHHHHHHHHHHHHhh
Confidence            3445566666  777554444    4455566789999998876321          113346666555443    22  


Q ss_pred             -CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270           76 -FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus        76 -~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                       ++.+..++||.++++.........+...+..+.         ....+...+|+|++++.++..... ..|++|++.+|.
T Consensus       179 ~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          179 RNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             TTEEEEEEEC----------------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC----
T ss_pred             cCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCe
Confidence             789999999999987544321122222222222         122356789999999999975543 347999999887


Q ss_pred             cc
Q 025270          154 AV  155 (255)
Q Consensus       154 ~~  155 (255)
                      .+
T Consensus       250 ~~  251 (253)
T 3qiv_A          250 II  251 (253)
T ss_dssp             --
T ss_pred             ec
Confidence            54

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.39  E-value=2.1e-07  Score=73.40  Aligned_cols=121  Identities=7%  Similarity=0.020  Sum_probs=75.2

Q ss_pred             cceEEecccCcccHHHHHHHH----hhCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.++.++++++    ++.+.++||++||... ++..             ....|+.+|...+        
T Consensus       109 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------~~~~Y~~sK~a~~~~~~~la~  173 (248)
T 2pnf_A          109 WEEVLKVN--LTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV-------------GQVNYSTTKAGLIGFTKSLAK  173 (248)
T ss_dssp             HHHHHHHH--THHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT-------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhh--hHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC-------------CCchHHHHHHHHHHHHHHHHH
Confidence            33445555  88886655544    4456789999999754 4321             1245666665322        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.++++|||.++++.... ....+........+         ...+++++|+|+++..++..... ..|++|++
T Consensus       174 e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  243 (248)
T 2pnf_A          174 ELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKYKEQIP---------LGRFGSPEEVANVVLFLCSELASYITGEVIHV  243 (248)
T ss_dssp             HHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HhcccCeEEEEEEeceecCchhhh-ccHHHHHHHHhcCC---------CCCccCHHHHHHHHHHHhCchhhcCCCcEEEe
Confidence                27899999999999875332 11122222222211         12478999999999999975432 34689999


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       244 ~gg~  247 (248)
T 2pnf_A          244 NGGM  247 (248)
T ss_dssp             STTC
T ss_pred             CCCc
Confidence            8764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.38  E-value=1.1e-06  Score=70.50  Aligned_cols=123  Identities=11%  Similarity=0.033  Sum_probs=81.8

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC---Cc------ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS---GV------KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~---~v------~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      ..++.++++|  +.++.++++++...   +.      .+||++||...+....            ....|+.+|...+  
T Consensus       127 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l  192 (276)
T 1mxh_A          127 AQVAELFGSN--AVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLP------------GFCVYTMAKHALGGL  192 (276)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCT------------TCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc--cHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCCC------------CCeehHHHHHHHHHH
Confidence            3455566777  99999999999873   34      7899999987764311            2246776665432  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                                .++.+..++||.|+++ ..  ....+...+....+  +      .+++.+.+|+|++++.++..... ..
T Consensus       193 ~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~~~~~~~~~~~~~p--~------~r~~~~~~dva~~v~~l~s~~~~~~t  261 (276)
T 1mxh_A          193 TRAAALELAPRHIRVNAVAPGLSLLP-PA--MPQETQEEYRRKVP--L------GQSEASAAQIADAIAFLVSKDAGYIT  261 (276)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBSCC-SS--SCHHHHHHHHTTCT--T------TSCCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHhhcCeEEEEEecCcccCC-cc--CCHHHHHHHHhcCC--C------CCCCCCHHHHHHHHHHHhCccccCcc
Confidence                      2899999999999998 22  22233333332211  1      12278999999999999975433 34


Q ss_pred             CCEEEecCCC
Q 025270          144 SNIFNLVSDR  153 (255)
Q Consensus       144 ~~~~~i~~~~  153 (255)
                      |+++++.+|.
T Consensus       262 G~~~~vdgG~  271 (276)
T 1mxh_A          262 GTTLKVDGGL  271 (276)
T ss_dssp             SCEEEESTTG
T ss_pred             CcEEEECCch
Confidence            7899998875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.37  E-value=4e-07  Score=73.05  Aligned_cols=126  Identities=10%  Similarity=0.024  Sum_probs=74.3

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC-------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS-------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~-------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.++.++++|  +.++.++++++...       +..+||++||...+.....           ....|+.+|...+    
T Consensus       127 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------~~~~Y~asKaa~~~~~~  193 (272)
T 4e3z_A          127 ERIERMLRVN--VTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT-----------QYVDYAASKAAIDTFTI  193 (272)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT-----------TCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhh--hHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC-----------CcchhHHHHHHHHHHHH
Confidence            3445566666  88988888887643       3468999999775532110           1245777765433    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                              .++.+..++||.|.++.............+..+.         ....+.+++|+|++++.++..... ..|+
T Consensus       194 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~edvA~~i~~l~s~~~~~~tG~  264 (272)
T 4e3z_A          194 GLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSV---------PMQRAGMPEEVADAILYLLSPSASYVTGS  264 (272)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBC------------------CC---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcC---------CcCCCcCHHHHHHHHHHHhCCccccccCC
Confidence                    2899999999999887543321222222222211         122356899999999999975543 3578


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      +|++.+|.
T Consensus       265 ~i~vdgG~  272 (272)
T 4e3z_A          265 ILNVSGGR  272 (272)
T ss_dssp             EEEESTTC
T ss_pred             EEeecCCC
Confidence            99998763

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.36  E-value=1.8e-07  Score=74.55  Aligned_cols=127  Identities=11%  Similarity=0.140  Sum_probs=81.2

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.++++++.    +.+.++||++||...+....            ....|+.+|...+        
T Consensus       115 ~~~~~~~~N--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  180 (260)
T 2zat_A          115 VWDKILHVN--VKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP------------NLGPYNVSKTALLGLTKNLAV  180 (260)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC------------CchhHHHHHHHHHHHHHHHHH
Confidence            345556666  888888777764    45678999999988774321            2256776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.+++||.+.++...... -......+..+         .....+++.+|+|+++..++..... ..|++++
T Consensus       181 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~  251 (260)
T 2zat_A          181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES---------LRIRRLGNPEDCAGIVSFLCSEDASYITGETVV  251 (260)
T ss_dssp             HHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH---------HTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcccCCccCCEEE
Confidence                2789999999999876432100 00000111110         1113478999999999999876543 3478999


Q ss_pred             ecCCCccC
Q 025270          149 LVSDRAVT  156 (255)
Q Consensus       149 i~~~~~~s  156 (255)
                      +.+|...|
T Consensus       252 vdgG~~~s  259 (260)
T 2zat_A          252 VGGGTASR  259 (260)
T ss_dssp             ESTTCCCC
T ss_pred             ECCCcccc
Confidence            99987655

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.36  E-value=7.9e-07  Score=70.26  Aligned_cols=126  Identities=12%  Similarity=0.036  Sum_probs=78.1

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      ...++..+++|  +.++.++++++.    +.+..+||++||...+....            ....|+.+|...+      
T Consensus       105 ~~~~~~~~~~N--~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~l  170 (249)
T 3f9i_A          105 DQDFDKVIDIN--LKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP------------GQANYCASKAGLIGMTKSL  170 (249)
T ss_dssp             --CHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS------------CSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC------------CCchhHHHHHHHHHHHHHH
Confidence            34455666666  888888887774    34556899999977654321            2356777776432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            .++.+..++||.|.++..... .......+..+.         ....+.+.+|+|+++..++..... ..|+++
T Consensus       171 a~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~  240 (249)
T 3f9i_A          171 SYEVATRGITVNAVAPGFIKSDMTDKL-NEKQREAIVQKI---------PLGTYGIPEDVAYAVAFLASNNASYITGQTL  240 (249)
T ss_dssp             HHHHGGGTEEEEEEEECCBC------C-CHHHHHHHHHHC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHcCcEEEEEecCccccCccccc-CHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCccCCccCcEE
Confidence                  278999999999988653321 122222222221         123478899999999999986543 347999


Q ss_pred             EecCCCc
Q 025270          148 NLVSDRA  154 (255)
Q Consensus       148 ~i~~~~~  154 (255)
                      ++.+|..
T Consensus       241 ~vdgG~~  247 (249)
T 3f9i_A          241 HVNGGML  247 (249)
T ss_dssp             EESTTSS
T ss_pred             EECCCEe
Confidence            9998763

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.36  E-value=3.5e-07  Score=72.27  Aligned_cols=124  Identities=12%  Similarity=0.054  Sum_probs=75.4

Q ss_pred             cceEEecccCcccHH----HHHHHHhhCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            8 FKALFRTNNNFRLQR----PVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~----~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      ++..++.|  +.++.    .++..+++.+. ++||++||...+....            ....|+.+|...         
T Consensus       106 ~~~~~~~N--~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~a~  171 (251)
T 1zk4_A          106 WRKLLAVN--LDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP------------SLGAYNASKGAVRIMSKSAAL  171 (251)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhh--hHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC------------CCccchHHHHHHHHHHHHHHH
Confidence            34445555  66544    45555666676 7999999987664321            124566666432         


Q ss_pred             -----hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           74 -----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        74 -----e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                           ..++.++++|||.++++...... ........ ..       ......+++.+|+|++++.++..... ..|+++
T Consensus       172 e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~-~~-------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  242 (251)
T 1zk4_A          172 DCALKDYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQ-RT-------KTPMGHIGEPNDIAYICVYLASNESKFATGSEF  242 (251)
T ss_dssp             HHHHTTCSEEEEEEEECCBCCHHHHTST-THHHHHTS-TT-------TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HhcccCCCeEEEEEeeCcCcchhhhhcC-chhhhHHH-hh-------cCCCCCCcCHHHHHHHHHHHcCcccccccCcEE
Confidence                 23789999999999886422110 01111101 11       11123478999999999999976533 346899


Q ss_pred             EecCCCc
Q 025270          148 NLVSDRA  154 (255)
Q Consensus       148 ~i~~~~~  154 (255)
                      ++.+|..
T Consensus       243 ~v~gG~~  249 (251)
T 1zk4_A          243 VVDGGYT  249 (251)
T ss_dssp             EESTTGG
T ss_pred             EECCCcc
Confidence            9998753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.35  E-value=5.6e-07  Score=71.78  Aligned_cols=129  Identities=8%  Similarity=0.013  Sum_probs=83.0

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++..+++|  +.++.++++++    ++.+..++|++||.+.++....          +..+.|+.+|...+       
T Consensus       109 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~----------~~~~~Y~asKaa~~~~~~~la  176 (264)
T 3i4f_A          109 DEWNEMIQGN--LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW----------IYRSAFAAAKVGLVSLTKTVA  176 (264)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC----------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc--cHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC----------CCCchhHHHHHHHHHHHHHHH
Confidence            3445556666  99999999988    5556679999999755532211          12256777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..++||.|+++..... ...........         .....+.+.+|+|+++..++..... ..|++++
T Consensus       177 ~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~  246 (264)
T 3i4f_A          177 YEEAEYGITANMVCPGDIIGEMKEAT-IQEARQLKEHN---------TPIGRSGTGEDIARTISFLCEDDSDMITGTIIE  246 (264)
T ss_dssp             HHHGGGTEEEEEEEECCCCGGGGSCC-HHHHHHC-----------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhhcCcEEEEEccCCccCccchhc-cHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEE
Confidence                 379999999999998754432 22211111111         1112367899999999999986543 3579999


Q ss_pred             ecCCCccC
Q 025270          149 LVSDRAVT  156 (255)
Q Consensus       149 i~~~~~~s  156 (255)
                      +.+|....
T Consensus       247 vdGG~~~~  254 (264)
T 3i4f_A          247 VTGAVDVI  254 (264)
T ss_dssp             ESCSCCCC
T ss_pred             EcCceeec
Confidence            99886543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.35  E-value=7.7e-07  Score=71.87  Aligned_cols=123  Identities=11%  Similarity=0.102  Sum_probs=76.3

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++..+++|  +.++.++++++.    +.+.++||++||...+....            ....|+.+|...+        
T Consensus       144 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la~  209 (285)
T 2c07_A          144 EWEDVLRTN--LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV------------GQANYSSSKAGVIGFTKSLAK  209 (285)
T ss_dssp             HHHHHHHHH--TTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC------------CCchHHHHHHHHHHHHHHHHH
Confidence            344455566  888777776665    45678999999986543211            1245776665332        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.++++|||.+.++.... ....+........+         ...+++.+|+|++++.++..... ..|+++++
T Consensus       210 e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v  279 (285)
T 2c07_A          210 ELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIP---------AGRMGTPEEVANLACFLSSDKSGYINGRVFVI  279 (285)
T ss_dssp             HHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHHHhhCC---------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEe
Confidence                28999999999998875332 11222222222211         12378999999999999976543 34789999


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       280 ~gG~  283 (285)
T 2c07_A          280 DGGL  283 (285)
T ss_dssp             STTS
T ss_pred             CCCc
Confidence            8875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.35  E-value=4.9e-07  Score=73.44  Aligned_cols=129  Identities=10%  Similarity=0.048  Sum_probs=83.8

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++.++++|  +.++.++++++...-.  .+||++||...+....            ....|+.+|...+        
T Consensus       150 ~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~  215 (294)
T 3r3s_A          150 SEQFQQTFAVN--VFALFWITQEAIPLLPKGASIITTSSIQAYQPSP------------HLLDYAATKAAILNYSRGLAK  215 (294)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC------------CchHHHHHHHHHHHHHHHHHH
Confidence            34456667777  9999999999987533  3899999988775321            1256777775432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.+..++||.|+++.....        ..................+...+|+|++++.++..... ..|+++++
T Consensus       216 e~~~~gI~vn~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v  287 (294)
T 3r3s_A          216 QVAEKGIRVNIVAPGPIWTALQISG--------GQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGV  287 (294)
T ss_dssp             HHGGGTCEEEEEEECSBCSHHHHTT--------TSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhhcCeEEEEEecCcCcccccccc--------CCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence                289999999999987531100        00000001111122223467899999999999875543 35799999


Q ss_pred             cCCCcc
Q 025270          150 VSDRAV  155 (255)
Q Consensus       150 ~~~~~~  155 (255)
                      .+|..+
T Consensus       288 dGG~~l  293 (294)
T 3r3s_A          288 CGGEHL  293 (294)
T ss_dssp             STTCCC
T ss_pred             CCCccC
Confidence            988754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.35  E-value=1.9e-07  Score=73.69  Aligned_cols=122  Identities=7%  Similarity=0.069  Sum_probs=73.1

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++..++.|  +.++.++++++..    .+.++||++||.. .++..             ....|+.+|...+       
T Consensus       106 ~~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------~~~~Y~~sK~a~~~~~~~la  170 (247)
T 2hq1_A          106 DWDDVLNTN--LKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA-------------GQANYAASKAGLIGFTKSIA  170 (247)
T ss_dssp             -CHHHHHHT--HHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-------------CCcHhHHHHHHHHHHHHHHH
Confidence            344455555  8887777777653    4678999999964 45431             1246776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+.+++||.+.++.... ....+......+.         ....+++++|+|+++..++..+.. ..|++|+
T Consensus       171 ~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  240 (247)
T 2hq1_A          171 KEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMYLNNI---------PLKRFGTPEEVANVVGFLASDDSNYITGQVIN  240 (247)
T ss_dssp             HHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHHHhhC---------CCCCCCCHHHHHHHHHHHcCcccccccCcEEE
Confidence                 27899999999987652111 1111222222221         123478999999999999875432 3468999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       241 v~gG~  245 (247)
T 2hq1_A          241 IDGGL  245 (247)
T ss_dssp             ESTTC
T ss_pred             eCCCc
Confidence            99875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.33  E-value=4.8e-07  Score=71.93  Aligned_cols=132  Identities=6%  Similarity=-0.012  Sum_probs=80.2

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.++++++.    +.+..++|++||...+...            +....|+.+|...+        
T Consensus       100 ~~~~~~~~N--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~  165 (256)
T 2d1y_A          100 EWRRVLEVN--LTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------------QENAAYNASKGGLVNLTRSLAL  165 (256)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC------------CCChhHHHHHHHHHHHHHHHHH
Confidence            345556666  888888888775    3467899999997654321            12256777765432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHH-cCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+..++||.+.++..     ..++.... ................+++++|+|++++.++..... ..|++++
T Consensus       166 e~~~~gi~v~~v~Pg~v~t~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~  240 (256)
T 2d1y_A          166 DLAPLRIRVNAVAPGAIATEAV-----LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILP  240 (256)
T ss_dssp             HHGGGTEEEEEEEECSBCCHHH-----HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhcCeEEEEEeeCCccCchh-----hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEE
Confidence                278999999998876421     11100000 011010111112234588999999999999976533 3468999


Q ss_pred             ecCCCccCH
Q 025270          149 LVSDRAVTL  157 (255)
Q Consensus       149 i~~~~~~s~  157 (255)
                      +.+|...++
T Consensus       241 v~gG~~~~~  249 (256)
T 2d1y_A          241 VDGGMTASF  249 (256)
T ss_dssp             ESTTGGGBC
T ss_pred             ECCCccccc
Confidence            998875543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.33  E-value=9.6e-07  Score=70.86  Aligned_cols=126  Identities=13%  Similarity=0.145  Sum_probs=77.8

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+       
T Consensus       121 ~~~~~~~~~N--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la  186 (273)
T 1ae1_A          121 KDYNIIMGTN--FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP------------SVSLYSASKGAINQMTKSLA  186 (273)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC------------CcchhHHHHHHHHHHHHHHH
Confidence            3445555666  888888888874    34567999999988775321            1256777665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCc-----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                           .++.+.+++||.++++......     ...+...+....+         ...+.+.+|+|+++..++..... ..
T Consensus       187 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~s~~~~~~t  257 (273)
T 1ae1_A          187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---------MGRAGKPQEVSALIAFLCFPAASYIT  257 (273)
T ss_dssp             HHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCcC
Confidence                 2899999999999987533210     0112222221111         11367999999999999875433 34


Q ss_pred             CCEEEecCCCc
Q 025270          144 SNIFNLVSDRA  154 (255)
Q Consensus       144 ~~~~~i~~~~~  154 (255)
                      |+++++.+|..
T Consensus       258 G~~i~vdGG~~  268 (273)
T 1ae1_A          258 GQIIWADGGFT  268 (273)
T ss_dssp             SCEEEESTTGG
T ss_pred             CCEEEECCCcc
Confidence            78999988753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.32  E-value=1.2e-06  Score=69.70  Aligned_cols=128  Identities=13%  Similarity=0.084  Sum_probs=84.1

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++    ++.+..+||++||...+....            ....|+.+|...+      
T Consensus       103 ~~~~~~~~~vN--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  168 (258)
T 3oid_A          103 ETHWDWTMNIN--AKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE------------NYTTVGVSKAALEALTRYL  168 (258)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC------------CcHHHHHHHHHHHHHHHHH
Confidence            34455566667  88888888887    445567999999977653211            2356777775433      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                            .++.+..++||.|..+...... ...+........+         ...+.+.+|+|++++.++..... ..|++
T Consensus       169 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~v~~L~s~~~~~itG~~  239 (258)
T 3oid_A          169 AVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP---------AGRMVEIKDMVDTVEFLVSSKADMIRGQT  239 (258)
T ss_dssp             HHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT---------TSSCBCHHHHHHHHHHHTSSTTTTCCSCE
T ss_pred             HHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcccCCccCCE
Confidence                  2789999999999876433211 1122233222221         12367899999999999986644 45799


Q ss_pred             EEecCCCcc
Q 025270          147 FNLVSDRAV  155 (255)
Q Consensus       147 ~~i~~~~~~  155 (255)
                      +++.+|...
T Consensus       240 i~vdGG~~~  248 (258)
T 3oid_A          240 IIVDGGRSL  248 (258)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCccC
Confidence            999988643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.32  E-value=1e-06  Score=69.73  Aligned_cols=133  Identities=8%  Similarity=-0.013  Sum_probs=72.7

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++    ++.+..++|++||...+...            +....|+.+|...+       
T Consensus        96 ~~~~~~~~~N--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  161 (250)
T 2fwm_X           96 EDWQQTFAVN--VGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR------------IGMSAYGASKAALKSLALSVG  161 (250)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc--cHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------------CCCchHHHHHHHHHHHHHHHH
Confidence            3455566666  88888888888    44466799999998766321            12256776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHH-HHHH-HHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEE-WFFD-RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                           .++.+.++|||.++++........ .... .+..-..  ..........+.+.+|+|++++.++..... ..|++
T Consensus       162 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~  239 (250)
T 2fwm_X          162 LELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE--QFKLGIPLGKIARPQEIANTILFLASDLASHITLQD  239 (250)
T ss_dssp             HHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhh--cccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence                 289999999999998753321000 0000 0100000  000001112378999999999999976533 34789


Q ss_pred             EEecCCCc
Q 025270          147 FNLVSDRA  154 (255)
Q Consensus       147 ~~i~~~~~  154 (255)
                      +++.+|..
T Consensus       240 i~vdGG~~  247 (250)
T 2fwm_X          240 IVVDGGST  247 (250)
T ss_dssp             EEESTTTT
T ss_pred             EEECCCcc
Confidence            99988753

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.32  E-value=4.3e-07  Score=71.90  Aligned_cols=123  Identities=9%  Similarity=0.052  Sum_probs=77.2

Q ss_pred             ccceEEecccCcccHH----HHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~----~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++..++.|  +.++.    .++..+++.+..+||++||...+....            ....|+.+|...+        
T Consensus       104 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  169 (249)
T 1o5i_A          104 DFKEAIDSL--FLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE------------NLYTSNSARMALTGFLKTLSF  169 (249)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC------------CCchHHHHHHHHHHHHHHHHH
Confidence            344455555  66644    455566666778999999988775321            1245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHH-HHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFD-RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.+++||.+.++.... ....... .+....         ....+++.+|+|++++.++..... ..|++++
T Consensus       170 e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~  239 (249)
T 1o5i_A          170 EVAPYGITVNCVAPGWTETERVKE-LLSEEKKKQVESQI---------PMRRMAKPEEIASVVAFLCSEKASYLTGQTIV  239 (249)
T ss_dssp             HHGGGTEEEEEEEECSBCCTTHHH-HSCHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhhcCeEEEEEeeCCCccCcccc-cchhhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCCCCCEEE
Confidence                38999999999998874221 0011111 222111         112478999999999999875433 3478999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       240 vdgG~  244 (249)
T 1o5i_A          240 VDGGL  244 (249)
T ss_dssp             ESTTC
T ss_pred             ECCCc
Confidence            98875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.32  E-value=9e-07  Score=70.68  Aligned_cols=128  Identities=10%  Similarity=0.021  Sum_probs=83.7

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ..++.++++|  +.++.++++++...-  -.+||++||...+....            ....|+.+|...+         
T Consensus       114 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e  179 (265)
T 1qsg_A          114 EGFKIAHDIS--SYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------------NYNVMGLAKASLEANVRYMANA  179 (265)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------------TTTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC------------CchHHHHHHHHHHHHHHHHHHH
Confidence            3455566677  999999999998752  24899999976653211            1245776665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+..++||.|+++..... ....+...+..+.++         ..+.+.+|+|++++.++..... ..|+++++
T Consensus       180 ~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s~~~~~~tG~~~~v  250 (265)
T 1qsg_A          180 MGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHV  250 (265)
T ss_dssp             HTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             hhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchhcCccCCEEEE
Confidence               278999999999998754321 122233333222211         1367899999999999875433 34689999


Q ss_pred             cCCCccC
Q 025270          150 VSDRAVT  156 (255)
Q Consensus       150 ~~~~~~s  156 (255)
                      .+|..++
T Consensus       251 dgG~~~~  257 (265)
T 1qsg_A          251 DGGFSIA  257 (265)
T ss_dssp             STTGGGB
T ss_pred             CCCcCCC
Confidence            9886543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.32  E-value=1.3e-06  Score=69.41  Aligned_cols=131  Identities=7%  Similarity=-0.017  Sum_probs=77.0

Q ss_pred             ccceEEecccCcccHH----HHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~----~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.    .++..+++.+..+||++||...+....            ....|..+|...+        
T Consensus       102 ~~~~~~~~N--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  167 (255)
T 2q2v_A          102 SWDKIIALN--LSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST------------GKAAYVAAKHGVVGLTKVVGL  167 (255)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC------------CchhHHHHHHHHHHHHHHHHH
Confidence            344555566  66544    455555667778999999987664311            1246776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCC----eeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP----VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                          .++.+.+++||.++++.... ..... ... .+..    -.+.........+++++|+|++++.++..... ..|+
T Consensus       168 e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~-~~~-~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~  244 (255)
T 2q2v_A          168 ETATSNVTCNAICPGWVLTPLVQK-QIDDR-AAN-GGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGA  244 (255)
T ss_dssp             HTTTSSEEEEEEEESSBCCHHHHH-HHHHH-HHH-TCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HhcccCcEEEEEeeCCCcCcchhh-hcccc-ccc-ccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCC
Confidence                27899999999998864221 00000 000 0000    00001112223589999999999999875433 3468


Q ss_pred             EEEecCCCc
Q 025270          146 IFNLVSDRA  154 (255)
Q Consensus       146 ~~~i~~~~~  154 (255)
                      ++++.+|..
T Consensus       245 ~~~vdgG~~  253 (255)
T 2q2v_A          245 AWNVDGGWL  253 (255)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCCcc
Confidence            999988753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.32  E-value=9e-07  Score=71.28  Aligned_cols=134  Identities=10%  Similarity=0.051  Sum_probs=83.1

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+ ..+||++||...+....            ....|+.+|...+    
T Consensus       125 ~~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~  190 (280)
T 3pgx_A          125 TDEQWDTVIGVN--LTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATP------------GNGHYSASKHGLTALTN  190 (280)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHhhh--hHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCC------------CchhHHHHHHHHHHHHH
Confidence            344455666677  8898888888743    22 46899999977653221            2356777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHc-CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                              .++.+..++||.|.++..........+..... .......  ......+++.+|+|++++.++..... ..|
T Consensus       191 ~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~p~dvA~~v~~L~s~~~~~itG  268 (280)
T 3pgx_A          191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM--PVQPNGFMTADEVADVVAWLAGDGSGTLTG  268 (280)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCB--TTBCSSCBCHHHHHHHHHHHHSGGGTTCSS
T ss_pred             HHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhc--ccCCCCCCCHHHHHHHHHHHhCccccCCCC
Confidence                    38999999999999986543211111111100 0111111  11112389999999999999875543 347


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++++.+|.
T Consensus       269 ~~i~vdGG~  277 (280)
T 3pgx_A          269 TQIPVDKGA  277 (280)
T ss_dssp             CEEEESTTG
T ss_pred             CEEEECCCc
Confidence            899998875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.29  E-value=9.6e-07  Score=70.20  Aligned_cols=124  Identities=10%  Similarity=-0.019  Sum_probs=77.4

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.++.++++++..    .+ ..+||++||...+...            +....|+.+|...+        
T Consensus       109 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~  174 (261)
T 1gee_A          109 WNKVIDTN--LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW------------PLFVHYAASKGGMKLMTETLAL  174 (261)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhh--hHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC------------CCccHHHHHHHHHHHHHHHHHH
Confidence            34445555  7787777776653    34 5699999997655321            12356777774322        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.++++|||.|+++...... ...+...+....+         ...+++.+|+|++++.++..... ..|++++
T Consensus       175 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  245 (261)
T 1gee_A          175 EYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP---------MGYIGEPEEIAAVAAWLASSEASYVTGITLF  245 (261)
T ss_dssp             HHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCCCcEEE
Confidence                2899999999999987432110 0112222222111         12478999999999999875432 3468999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       246 v~gg~~  251 (261)
T 1gee_A          246 ADGGMT  251 (261)
T ss_dssp             ESTTGG
T ss_pred             EcCCcc
Confidence            998764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.29  E-value=4.4e-07  Score=72.91  Aligned_cols=128  Identities=9%  Similarity=0.118  Sum_probs=83.0

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+      
T Consensus       127 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  192 (273)
T 3uf0_A          127 LGRWREVLTVN--LDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR------------NVAAYAASKHAVVGLTRAL  192 (273)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS------------SCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC------------CChhHHHHHHHHHHHHHHH
Confidence            34455666667  889888888773    34667899999987663321            1256777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                            .++.+..++||.|.++..... ........+....+         ...+...+|+|++++.++..... ..|++
T Consensus       193 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~v~~L~s~~a~~itG~~  263 (273)
T 3uf0_A          193 ASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP---------AGRWATPEDMVGPAVFLASDAASYVHGQV  263 (273)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST---------TSSCBCGGGGHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCchhcCCcCCE
Confidence                  379999999999988643211 01112222222211         12367899999999999986533 35799


Q ss_pred             EEecCCCcc
Q 025270          147 FNLVSDRAV  155 (255)
Q Consensus       147 ~~i~~~~~~  155 (255)
                      +++.+|...
T Consensus       264 i~vdGG~~~  272 (273)
T 3uf0_A          264 LAVDGGWLA  272 (273)
T ss_dssp             EEESTTGGG
T ss_pred             EEECcCccC
Confidence            999988654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.28  E-value=1.9e-06  Score=68.30  Aligned_cols=124  Identities=10%  Similarity=0.030  Sum_probs=76.2

Q ss_pred             ccceEEecccCcccHH----HHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~----~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++..++.|  +.++.    .++..+++.+..+||++||...+....            ....|+.+|...+        
T Consensus       102 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la~  167 (254)
T 1hdc_A          102 RFRKVVEIN--LTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA------------LTSSYGASKWGVRGLSKLAAV  167 (254)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC------------CchhHHHHHHHHHHHHHHHHH
Confidence            345555666  66665    555666666678999999987664211            2256777665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeee-eHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA-HVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i-~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.++|||.++++..         .... .....-.........+. +.+|+|++++.++..... ..|++++
T Consensus       168 e~~~~gi~v~~v~Pg~v~t~~~---------~~~~-~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  237 (254)
T 1hdc_A          168 ELGTDRIRVNSVHPGMTYTPMT---------AETG-IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELA  237 (254)
T ss_dssp             HHGGGTEEEEEEEECSBCCHHH---------HHHT-CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HhhhcCeEEEEEecccCcCccc---------cccc-hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEE
Confidence                278999999999987521         1111 10000000111112367 999999999999976533 3478999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       238 vdgG~~  243 (254)
T 1hdc_A          238 VDGGWT  243 (254)
T ss_dssp             ESTTTT
T ss_pred             ECCCcc
Confidence            988753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.28  E-value=8.1e-07  Score=70.82  Aligned_cols=125  Identities=13%  Similarity=0.072  Sum_probs=78.4

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++..++.|  +.++.++++++..    .+ ..++|++||...+...            +....|+.+|...+       
T Consensus       109 ~~~~~~~~n--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  174 (263)
T 3ak4_A          109 EWDFNFDVN--ARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA------------PLLAHYSASKFAVFGWTQALA  174 (263)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC------------CCchhHHHHHHHHHHHHHHHH
Confidence            344455556  8888888887764    34 5789999997765321            11246776665322       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCc-----H-----HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDC-----E-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~-----~-----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                           .++++.++|||.++++......     .     ......+...         .....+++.+|+|++++.++...
T Consensus       175 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~v~~l~s~~  245 (263)
T 3ak4_A          175 REMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---------TPLGRIEEPEDVADVVVFLASDA  245 (263)
T ss_dssp             HHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCcc
Confidence                 2899999999999886421100     0     0111111111         11234789999999999999765


Q ss_pred             Cc-CCCCEEEecCCCc
Q 025270          140 EA-ASSNIFNLVSDRA  154 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~~  154 (255)
                      .. ..|+++++.+|..
T Consensus       246 ~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          246 ARFMTGQGINVTGGVR  261 (263)
T ss_dssp             GTTCCSCEEEESSSSS
T ss_pred             ccCCCCCEEEECcCEe
Confidence            32 3478999998854

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.27  E-value=2.4e-07  Score=73.85  Aligned_cols=126  Identities=12%  Similarity=0.128  Sum_probs=79.4

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.++++++.    +.+..++|++||...+...            +....|+.+|...+        
T Consensus       110 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~  175 (260)
T 2ae2_A          110 DYSLIMSIN--FEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV------------PYEAVYGATKGAMDQLTRCLAF  175 (260)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------------CCcchHHHHHHHHHHHHHHHHH
Confidence            344555666  889888888884    4567899999998765321            11245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc-HHHHHH---HHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC-EEWFFD---RIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~---~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                          .++.+.+++||.+.++...... ......   .+....         ....+++.+|+|+++..++..... ..|+
T Consensus       176 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~v~~l~s~~~~~~tG~  246 (260)
T 2ae2_A          176 EWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------ALRRMGEPKELAAMVAFLCFPAASYVTGQ  246 (260)
T ss_dssp             HTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCccccCCCCC
Confidence                2789999999999775311000 000111   121111         112478999999999999875433 3478


Q ss_pred             EEEecCCCcc
Q 025270          146 IFNLVSDRAV  155 (255)
Q Consensus       146 ~~~i~~~~~~  155 (255)
                      ++++.+|...
T Consensus       247 ~~~vdgG~~~  256 (260)
T 2ae2_A          247 IIYVDGGLMA  256 (260)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCccc
Confidence            9999988644

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.25  E-value=3.4e-07  Score=73.72  Aligned_cols=123  Identities=15%  Similarity=0.128  Sum_probs=78.4

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .++.++++|  +.++.++++++...      +..+||++||...+...            +....|+.+|...+      
T Consensus       122 ~~~~~~~~N--~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l  187 (277)
T 2rhc_B          122 LWLDVVETN--LTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV------------VHAAPYSASKHGVVGFTKAL  187 (277)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC------------CCCccHHHHHHHHHHHHHHH
Confidence            345555666  99999999987654      56799999997654321            11246776665432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcH-----------HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                            .++.+.+++||.+.++.... ..           ......+..+         .....+++.+|+|++++.++.
T Consensus       188 a~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~s  257 (277)
T 2rhc_B          188 GLELARTGITVNAVCPGFVETPMAAS-VREHYSDIWEVSTEEAFDRITAR---------VPIGRYVQPSEVAEMVAYLIG  257 (277)
T ss_dssp             HHHHTTTEEEEEEEEECSBCSHHHHH-HHHHHHHHHTCCHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHhCcEEEEEecCcCcCchhhh-hhhhcccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhC
Confidence                  27899999999998763211 00           0011111111         111347899999999999997


Q ss_pred             CCCc-CCCCEEEecCCC
Q 025270          138 NPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       138 ~~~~-~~~~~~~i~~~~  153 (255)
                      .... ..|+++++.+|.
T Consensus       258 ~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          258 PGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             chhcCCCCcEEEECCCc
Confidence            6533 347899998875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.25  E-value=1.1e-06  Score=70.03  Aligned_cols=133  Identities=13%  Similarity=0.160  Sum_probs=74.5

Q ss_pred             ccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            7 KFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .++..++.|  +.++.++.+++    ++.+..++|++||...+....            ....|+.+|...         
T Consensus       108 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  173 (260)
T 2z1n_A          108 DWDESYRLL--ARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ------------DLALSNIMRLPVIGVVRTLAL  173 (260)
T ss_dssp             HHHHHHHHT--HHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TBHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC------------CCchhHHHHHHHHHHHHHHHH
Confidence            344555556  77775555544    455778999999988764321            124566655432         


Q ss_pred             h---hCCceEEEecCcccCCCCCCCcHHH-HHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           74 E---NFSNWASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        74 e---~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                      +   .++.+.+++||.|+++......... ......................+.+.+|+|++++.++..... ..|++++
T Consensus       174 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~  253 (260)
T 2z1n_A          174 ELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIP  253 (260)
T ss_dssp             HHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEE
Confidence            1   2899999999999987644110000 000000000000000001112367999999999999975433 3478999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       254 vdGG~  258 (260)
T 2z1n_A          254 VDGGA  258 (260)
T ss_dssp             ESTTT
T ss_pred             eCCCc
Confidence            88774

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.24  E-value=3e-06  Score=68.36  Aligned_cols=125  Identities=7%  Similarity=-0.013  Sum_probs=80.5

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCC---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ..++.++++|  +.++.++++++...-   -.+||++||...+....            ....|+.+|...+        
T Consensus       125 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  190 (285)
T 2p91_A          125 EGFKIAMDIS--VYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP------------HYNVMGIAKAALESTVRYLAY  190 (285)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT------------TTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC------------CccHHHHHHHHHHHHHHHHHH
Confidence            3445566666  999999999987652   26899999976553211            1245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+.+++||.|+++..... ....+...+....++         ..+.+.+|+|++++.++..... ..|++++
T Consensus       191 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  261 (285)
T 2p91_A          191 DIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDVGDTAVFLCSDWARAITGEVVH  261 (285)
T ss_dssp             HHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCCcccCCCCCEEE
Confidence                289999999999998764331 122233332222111         1257899999999999875432 3468899


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       262 vdgg~  266 (285)
T 2p91_A          262 VDNGY  266 (285)
T ss_dssp             ESTTG
T ss_pred             ECCCc
Confidence            98875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.24  E-value=1.3e-06  Score=68.68  Aligned_cols=127  Identities=10%  Similarity=0.085  Sum_probs=79.4

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+.+++|++||...+....          .+....|+.+|...+       
T Consensus        92 ~~~~~~~~~N--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~~Y~~sK~a~~~~~~~la  159 (239)
T 2ekp_A           92 EEWRRVLYLH--LDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG----------PVPIPAYTTAKTALLGLTRALA  159 (239)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC----------CCCCccHHHHHHHHHHHHHHHH
Confidence            3445555666  778777777763    44678999999988775321          012356777665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                           .++++.++|||.+.++...... ...+...+....+         ...+.+.+|+|++++.++..... ..|+.+
T Consensus       160 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  230 (239)
T 2ekp_A          160 KEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP---------MGRWARPEEIARVAAVLCGDEAEYLTGQAV  230 (239)
T ss_dssp             HHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence                 2899999999999876422100 0112222222111         12368999999999999875432 347889


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      ++.+|.
T Consensus       231 ~vdgG~  236 (239)
T 2ekp_A          231 AVDGGF  236 (239)
T ss_dssp             EESTTT
T ss_pred             EECCCc
Confidence            888774

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.23  E-value=9.9e-07  Score=71.50  Aligned_cols=128  Identities=12%  Similarity=0.024  Sum_probs=83.7

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++.++++|  +.++.++++++...  +..++|++||...+....            ....|+.+|...+        
T Consensus       147 ~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~  212 (291)
T 3ijr_A          147 AEQLEKTFRIN--IFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE------------TLIDYSATKGAIVAFTRSLSQ  212 (291)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC------------CChhHHHHHHHHHHHHHHHHH
Confidence            34456666777  99999999999865  235899999987764321            1256777775432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.+..++||.|+++.............         +........+.+.+|+|++++.++..... ..|+++++
T Consensus       213 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~v  283 (291)
T 3ijr_A          213 SLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---------FGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHV  283 (291)
T ss_dssp             HHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---------TTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH---------HHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEE
Confidence                28999999999998863211000111111         11122233477899999999999976543 35789999


Q ss_pred             cCCCcc
Q 025270          150 VSDRAV  155 (255)
Q Consensus       150 ~~~~~~  155 (255)
                      .+|..+
T Consensus       284 dGG~~~  289 (291)
T 3ijr_A          284 NGGVIV  289 (291)
T ss_dssp             SSSCCC
T ss_pred             CCCccc
Confidence            988643

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.23  E-value=1.9e-06  Score=68.56  Aligned_cols=119  Identities=10%  Similarity=0.044  Sum_probs=76.3

Q ss_pred             ccceEEecccCcccHHHH----HHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~l----l~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.++    +..+++.+..++|++||...+....            ....|+.+|...+        
T Consensus       104 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  169 (260)
T 1nff_A          104 EWQRILDVN--LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV------------ACHGYTATKFAVRGLTKSTAL  169 (260)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC------------CchhHHHHHHHHHHHHHHHHH
Confidence            445556666  7777544    4445555678999999987764321            1245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.++++|||.++++....           ....+.  .  .....+++.+|+|+++..++..... ..|+++++
T Consensus       170 e~~~~gi~v~~v~Pg~v~t~~~~~-----------~~~~~~--~--~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v  234 (260)
T 1nff_A          170 ELGPSGIRVNSIHPGLVKTPMTDW-----------VPEDIF--Q--TALGRAAEPVEVSNLVVYLASDESSYSTGAEFVV  234 (260)
T ss_dssp             HHGGGTEEEEEEEECCBCSGGGTT-----------SCTTCS--C--CSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HhCccCcEEEEEEeCCCCCCcccc-----------chhhHH--h--CccCCCCCHHHHHHHHHHHhCccccCCcCCEEEE
Confidence                38999999999999874320           000110  0  1112478999999999999975433 34689999


Q ss_pred             cCCCc
Q 025270          150 VSDRA  154 (255)
Q Consensus       150 ~~~~~  154 (255)
                      .+|..
T Consensus       235 ~gG~~  239 (260)
T 1nff_A          235 DGGTV  239 (260)
T ss_dssp             STTGG
T ss_pred             CCCee
Confidence            98864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.23  E-value=2.1e-07  Score=76.64  Aligned_cols=141  Identities=10%  Similarity=0.032  Sum_probs=90.5

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCCc----------ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSGV----------KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~v----------~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e   74 (255)
                      .+.++.++++|  +.++.++++++...-.          .+||++||...+....            ....|+.+|...+
T Consensus       135 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaal~  200 (322)
T 3qlj_A          135 EEEFDAVIAVH--LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSV------------GQGNYSAAKAGIA  200 (322)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBT------------TCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCC------------CCccHHHHHHHHH
Confidence            34455566667  8998888888754311          4899999976553211            1256777775432


Q ss_pred             ------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 ------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 ------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                                  .++.+..++|| +..+........ .            .......+.++..+|+|++++.++..... 
T Consensus       201 ~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-~------------~~~~~~~~~~~~pedva~~v~~L~s~~~~~  266 (322)
T 3qlj_A          201 TLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-M------------MATQDQDFDAMAPENVSPLVVWLGSAEARD  266 (322)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------------CCTTCGGGTHHHHHHHTSGGGGG
T ss_pred             HHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-h------------hhccccccCCCCHHHHHHHHHHHhCccccC
Confidence                        37999999999 655432221000 0            00112223456899999999999875543 


Q ss_pred             CCCCEEEecCCCcc-----------------CHHHHHHHHHHHhCCCCe
Q 025270          142 ASSNIFNLVSDRAV-----------------TLDGMAKLCAQAAGLPVE  173 (255)
Q Consensus       142 ~~~~~~~i~~~~~~-----------------s~~el~~~i~~~~g~~~~  173 (255)
                      ..|+++++.+|...                 ++.|+++.+.+.+|.+.+
T Consensus       267 itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~  315 (322)
T 3qlj_A          267 VTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP  315 (322)
T ss_dssp             CCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred             CCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence            35789999887644                 779999999999986433

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.22  E-value=2.8e-06  Score=66.93  Aligned_cols=126  Identities=9%  Similarity=0.024  Sum_probs=82.2

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++..    .+..++|++||...+....            ....|+.+|...+       
T Consensus       104 ~~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la  169 (247)
T 3lyl_A          104 DEWQSVINTN--LSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP------------GQTNYCAAKAGVIGFSKSLA  169 (247)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC------------CcHHHHHHHHHHHHHHHHHH
Confidence            3445556666  8888888887654    3456899999977553211            2256777775322       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..++||.+..+..... ..........+         .....+.+.+|+|+++..++..... ..|++++
T Consensus       170 ~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~  239 (247)
T 3lyl_A          170 YEVASRNITVNVVAPGFIATDMTDKL-TDEQKSFIATK---------IPSGQIGEPKDIAAAVAFLASEEAKYITGQTLH  239 (247)
T ss_dssp             HHHGGGTEEEEEEEECSBCCTTTTTS-CHHHHHHHHTT---------STTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHcCeEEEEEeeCcEecccchhc-cHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEE
Confidence                 379999999999988754332 12222222221         1223478999999999999976543 3579999


Q ss_pred             ecCCCcc
Q 025270          149 LVSDRAV  155 (255)
Q Consensus       149 i~~~~~~  155 (255)
                      +.+|..+
T Consensus       240 vdgG~~~  246 (247)
T 3lyl_A          240 VNGGMYM  246 (247)
T ss_dssp             ESTTSSC
T ss_pred             ECCCEec
Confidence            9988644

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.22  E-value=1.9e-06  Score=68.78  Aligned_cols=125  Identities=10%  Similarity=0.061  Sum_probs=76.7

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC-----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS-----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~-----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.++.++++|  +.++.++++++...     +..++|++||...+....            ....|+.+|...+      
T Consensus       123 ~~~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l  188 (266)
T 3o38_A          123 EEWDRVLNVT--LTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH------------SQSHYAAAKAGVMALTRCS  188 (266)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC------------CCchHHHHHHHHHHHHHHH
Confidence            3445556666  88888888887653     456899999977653211            2256777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            .++.+..++||.|..+.............+.         .......+.+.+|+|++++.++..... ..|+++
T Consensus       189 a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i  259 (266)
T 3o38_A          189 AIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLA---------SDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVV  259 (266)
T ss_dssp             HHHHGGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHH---------hcCCcCCCCCHHHHHHHHHHHcCccccCccCCEE
Confidence                  3799999999999876433211111111111         112234478999999999999986433 457899


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      ++.+|.
T Consensus       260 ~vdgG~  265 (266)
T 3o38_A          260 SVSSQR  265 (266)
T ss_dssp             EESSCC
T ss_pred             EEcCCc
Confidence            998874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.22  E-value=2.2e-06  Score=67.41  Aligned_cols=114  Identities=13%  Similarity=0.059  Sum_probs=75.6

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++..    .+..+||++||...+....            ....|+.+|...+         
T Consensus       110 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e  175 (244)
T 2bd0_A          110 FDYTMNTN--LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR------------HSSIYCMSKFGQRGLVETMRLY  175 (244)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC------------CCchhHHHHHHHHHHHHHHHHH
Confidence            34445555  8888888888743    4667999999988764321            1245776665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.++++|||.|+++......           ..       . ...+++.+|+|++++.++..+.. ..++++...
T Consensus       176 ~~~~gi~v~~v~Pg~v~t~~~~~~~-----------~~-------~-~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~  236 (244)
T 2bd0_A          176 ARKCNVRITDVQPGAVYTPMWGKVD-----------DE-------M-QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRP  236 (244)
T ss_dssp             HTTTTEEEEEEEECCBCSTTTCCCC-----------ST-------T-GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             hhccCcEEEEEECCCccchhhhhcc-----------cc-------c-cccCCCHHHHHHHHHHHHhCCccccchheEEec
Confidence               3789999999999997543210           00       0 12578999999999999987654 233555555


Q ss_pred             CCCc
Q 025270          151 SDRA  154 (255)
Q Consensus       151 ~~~~  154 (255)
                      +++.
T Consensus       237 ~~~~  240 (244)
T 2bd0_A          237 TSGD  240 (244)
T ss_dssp             TTCC
T ss_pred             cccc
Confidence            5443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.21  E-value=1.1e-06  Score=71.33  Aligned_cols=127  Identities=10%  Similarity=0.085  Sum_probs=84.0

Q ss_pred             CccccceEEecccCcccHHHHHHHHh----hCCcceEEEecccccc--CCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIY--KPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy--~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.++.++++|  +.++.++++++.    +.+..+||++||...+  +..             ....|+.+|...+   
T Consensus       139 ~~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~-------------~~~~Y~asKaa~~~l~  203 (293)
T 3rih_A          139 TPEQLSEVLDVN--VKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYP-------------GWSHYGASKAAQLGFM  203 (293)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCT-------------TCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCC-------------CCHHHHHHHHHHHHHH
Confidence            344556667777  999999999883    4566799999997642  211             2256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               .++.+..++||.|+++.... ....+...+....++         .-+...+|+|+++..++..... ..|
T Consensus       204 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dvA~~v~fL~s~~a~~itG  273 (293)
T 3rih_A          204 RTAAIELAPRGVTVNAILPGNILTEGLVD-MGEEYISGMARSIPM---------GMLGSPVDIGHLAAFLATDEAGYITG  273 (293)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCHHHHH-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHhhhCeEEEEEecCCCcCcchhh-ccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCccccCCCC
Confidence                     38999999999998864221 112333344433221         1245789999999999875543 357


Q ss_pred             CEEEecCCCcc
Q 025270          145 NIFNLVSDRAV  155 (255)
Q Consensus       145 ~~~~i~~~~~~  155 (255)
                      +++++.+|..+
T Consensus       274 ~~i~vdGG~~~  284 (293)
T 3rih_A          274 QAIVVDGGQVL  284 (293)
T ss_dssp             CEEEESTTTTC
T ss_pred             CEEEECCCccC
Confidence            99999988643

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.21  E-value=1.9e-06  Score=68.75  Aligned_cols=128  Identities=11%  Similarity=0.120  Sum_probs=83.6

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC----CcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.+.++.++++|  +.++.++++++...    +..++|++||.... ..            .+....|+.+|...+    
T Consensus       108 ~~~~~~~~~~~N--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~~Y~asK~a~~~l~~  173 (262)
T 3pk0_A          108 TPEQLNGIFAVN--VNGTFYAVQACLDALIASGSGRVVLTSSITGPITG------------YPGWSHYGATKAAQLGFMR  173 (262)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC------------CTTCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC------------CCCChhhHHHHHHHHHHHH
Confidence            344455666777  88888888887654    66799999996642 11            012356777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                              .++.+..++||.|+++.... ....+...+....+.         ..+...+|+|+++..++..... ..|+
T Consensus       174 ~la~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~L~s~~~~~itG~  243 (262)
T 3pk0_A          174 TAAIELAPHKITVNAIMPGNIMTEGLLE-NGEEYIASMARSIPA---------GALGTPEDIGHLAAFLATKEAGYITGQ  243 (262)
T ss_dssp             HHHHHHGGGTCEEEEEEECSBCCHHHHT-TCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHhhCcEEEEEEeCcCcCccccc-cCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCccccCCcCC
Confidence                    38999999999998863221 112233333333221         1267899999999999975543 3579


Q ss_pred             EEEecCCCcc
Q 025270          146 IFNLVSDRAV  155 (255)
Q Consensus       146 ~~~i~~~~~~  155 (255)
                      ++++.+|..+
T Consensus       244 ~i~vdGG~~~  253 (262)
T 3pk0_A          244 AIAVDGGQVL  253 (262)
T ss_dssp             EEEESTTTTC
T ss_pred             EEEECCCeec
Confidence            9999988643

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.21  E-value=2e-06  Score=68.32  Aligned_cols=127  Identities=9%  Similarity=-0.003  Sum_probs=79.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC----------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS----------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~----------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-   74 (255)
                      +.++.++++|  +.++.++++++...          +..++|++||...+....            ....|+.+|...+ 
T Consensus       107 ~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~  172 (257)
T 3tpc_A          107 DSFARTVAVN--LIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------------GQAAYAASKGGVAA  172 (257)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------------CCcchHHHHHHHHH
Confidence            3455566667  99999999888753          346799999987653321            1256777775332 


Q ss_pred             -----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCC
Q 025270           75 -----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  143 (255)
Q Consensus        75 -----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  143 (255)
                                 .++.+..++||.|.++..... .......+....  ++      ...+.+.+|+|+++..++... ...
T Consensus       173 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~--p~------~~r~~~~~dva~~v~~l~s~~-~it  242 (257)
T 3tpc_A          173 LTLPAARELARFGIRVVTIAPGIFDTPMMAGM-PQDVQDALAASV--PF------PPRLGRAEEYAALVKHICENT-MLN  242 (257)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCS--SS------SCSCBCHHHHHHHHHHHHHCT-TCC
T ss_pred             HHHHHHHHHHHcCeEEEEEEeCCCCChhhccC-CHHHHHHHHhcC--CC------CCCCCCHHHHHHHHHHHcccC-CcC
Confidence                       389999999999988753321 111111111111  11      024789999999999999863 344


Q ss_pred             CCEEEecCCCccC
Q 025270          144 SNIFNLVSDRAVT  156 (255)
Q Consensus       144 ~~~~~i~~~~~~s  156 (255)
                      |+++++.+|..++
T Consensus       243 G~~i~vdGG~~~~  255 (257)
T 3tpc_A          243 GEVIRLDGALRMA  255 (257)
T ss_dssp             SCEEEESTTCCC-
T ss_pred             CcEEEECCCccCC
Confidence            7999999887554

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.19  E-value=4.1e-07  Score=72.21  Aligned_cols=138  Identities=8%  Similarity=-0.051  Sum_probs=74.1

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCC----------------CCCCCCCChhH
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEG----------------DVVKPDAGHVQ   67 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~----------------~~~~~~~~~y~   67 (255)
                      ++.++++|  +.++.++++++.    +.+..++|++||...+......+..+.                ....+....|+
T Consensus        79 ~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  156 (257)
T 1fjh_A           79 LGNVVSVN--YFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA  156 (257)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHH
Confidence            34445555  888888888876    456679999999887732111010000                01111224577


Q ss_pred             HHHHHHh------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHH
Q 025270           68 VEKYISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLA  135 (255)
Q Consensus        68 ~ek~~~e------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~  135 (255)
                      .+|...+            .++.+.+++||.|.++.................  +.     .....+++.+|+|++++.+
T Consensus       157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~dvA~~~~~l  229 (257)
T 1fjh_A          157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK--FV-----PPMGRRAEPSEMASVIAFL  229 (257)
T ss_dssp             HHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CC-----CSTTSCCCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh--cc-----cccCCCCCHHHHHHHHHHH
Confidence            7775432            379999999999988753321000011111110  00     0112378999999999999


Q ss_pred             hcCCCc-CCCCEEEecCCCc
Q 025270          136 VENPEA-ASSNIFNLVSDRA  154 (255)
Q Consensus       136 l~~~~~-~~~~~~~i~~~~~  154 (255)
                      +..+.. ..|+.+++.+|..
T Consensus       230 ~~~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          230 MSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             TSGGGTTCCSCEEEESTTHH
T ss_pred             hCchhcCCcCCEEEECCCcc
Confidence            976532 3468999888753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.19  E-value=9.5e-07  Score=71.90  Aligned_cols=124  Identities=15%  Similarity=0.117  Sum_probs=76.9

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      ++..+++|  +.++.++++++...    +..++|++||...++.             +....|+.+|...         +
T Consensus       124 ~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------------~~~~~Y~~sK~a~~~~~~~la~e  188 (303)
T 1yxm_A          124 WHAVLETN--LTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-------------PLAVHSGAARAGVYNLTKSLALE  188 (303)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC-------------CcchhhHHHHHHHHHHHHHHHHH
Confidence            34445556  99999999997652    3468999999772221             1124566555432         2


Q ss_pred             ---hCCceEEEecCcccCCC--CCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ---NFSNWASFRPQYMIGSG--NNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~--~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                         .++.++++|||.|+|+.  .... ....+...+...         .....+++.+|+|++++.++..... ..|+++
T Consensus       189 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~  259 (303)
T 1yxm_A          189 WACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---------IPAKRIGVPEEVSSVVCFLLSPAASFITGQSV  259 (303)
T ss_dssp             TGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---------STTSSCBCTHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             hcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---------CcccCCCCHHHHHHHHHHHhCcccccCCCcEE
Confidence               28999999999999983  2211 001111111111         0112378999999999999975432 347899


Q ss_pred             EecCCCcc
Q 025270          148 NLVSDRAV  155 (255)
Q Consensus       148 ~i~~~~~~  155 (255)
                      ++.+|...
T Consensus       260 ~v~gG~~~  267 (303)
T 1yxm_A          260 DVDGGRSL  267 (303)
T ss_dssp             EESTTGGG
T ss_pred             EECCCeec
Confidence            99988654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.19  E-value=1.7e-06  Score=68.84  Aligned_cols=133  Identities=11%  Similarity=0.016  Sum_probs=75.4

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+..+||++||...+....            ....|+.+|...+       
T Consensus       105 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la  170 (260)
T 1x1t_A          105 EKWDAILALN--LSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA------------NKSAYVAAKHGVVGFTKVTA  170 (260)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC------------CCchHHHHHHHHHHHHHHHH
Confidence            3445556666  888888877774    34567999999987654211            1256776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHH-Hc-CCCeecc-CCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRI-VR-KRPVPIP-GSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~-~~~~~i~-~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                           .++.+..++||.|.++..... ........ .. .....-. ........+.+.+|+|++++.++..... ..|+
T Consensus       171 ~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~  249 (260)
T 1x1t_A          171 LETAGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGT  249 (260)
T ss_dssp             HHHTTTTEEEEEEEECCBCC-------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHhccCCEEEEEEeecCccCchHHHh-hhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCC
Confidence                 278999999999988753321 00000000 00 0000000 0001123478999999999999975432 3478


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      ++++.+|.
T Consensus       250 ~~~vdgG~  257 (260)
T 1x1t_A          250 TVSVDGGW  257 (260)
T ss_dssp             EEEESTTG
T ss_pred             EEEECCCc
Confidence            99998875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.19  E-value=5e-07  Score=71.63  Aligned_cols=123  Identities=11%  Similarity=0.150  Sum_probs=79.0

Q ss_pred             cceEEecccCcccHHHHHHHHhh----CC--c---ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----SG--V---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----~~--v---~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      ++.+++.|  +.++.++++++..    .+  .   .++|++||...+....           +....|+.+|...+    
T Consensus       110 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~  176 (258)
T 3afn_B          110 YDAVMDAN--IRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG-----------PGAGLYGAAKAFLHNVHK  176 (258)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC-----------TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc--cHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC-----------CCchHHHHHHHHHHHHHH
Confidence            34445555  8888888776643    22  2   6899999977654110           12245776665432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASS  144 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~  144 (255)
                              .++++.++|||.++++..... ...+...+..+.+         ...+++++|+|++++.++.....  ..|
T Consensus       177 ~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~~G  246 (258)
T 3afn_B          177 NWVDFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRISNGIP---------MGRFGTAEEMAPAFLFFASHLASGYITG  246 (258)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHHHTTCT---------TCSCBCGGGTHHHHHHHHCHHHHTTCCS
T ss_pred             HHHHhhcccCeEEEEEeCCCccccccccc-CHHHHHHHhccCC---------CCcCCCHHHHHHHHHHHhCcchhccccC
Confidence                    279999999999999754331 2233344433322         13578999999999999975432  236


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      ++|++.+|.
T Consensus       247 ~~~~v~gg~  255 (258)
T 3afn_B          247 QVLDINGGQ  255 (258)
T ss_dssp             EEEEESTTS
T ss_pred             CEEeECCCc
Confidence            899998875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.18  E-value=4.1e-07  Score=72.46  Aligned_cols=130  Identities=8%  Similarity=0.021  Sum_probs=80.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ++..++.|  +.++.++++++...    + .++||++||...+......    ..+.. +...|+.+|...+        
T Consensus       116 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~~~~~-~~~~Y~~sK~a~~~~~~~la~  188 (265)
T 1h5q_A          116 FAFVYDVN--VFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----LNGSL-TQVFYNSSKAACSNLVKGLAA  188 (265)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----TTEEC-SCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhh--hHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc----ccccc-cccccHHHHHHHHHHHHHHHH
Confidence            34445556  88888988887643    2 4789999998765432110    00111 1256776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.++++|||.|+++..... ...+........+         ...+++.+|+|++++.++..... ..|+++++
T Consensus       189 e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v  258 (265)
T 1h5q_A          189 EWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQASNIP---------LNRFAQPEEMTGQAILLLSDHATYMTGGEYFI  258 (265)
T ss_dssp             HHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHhcCcEEEEEecCcccccccccc-chhHHHHHHhcCc---------ccCCCCHHHHHHHHHhhccCchhcCcCcEEEe
Confidence                279999999999998753321 1222222222211         12378999999999999976532 34789999


Q ss_pred             cCCCc
Q 025270          150 VSDRA  154 (255)
Q Consensus       150 ~~~~~  154 (255)
                      .+|..
T Consensus       259 ~gG~~  263 (265)
T 1h5q_A          259 DGGQL  263 (265)
T ss_dssp             CTTGG
T ss_pred             cCCEe
Confidence            98863

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.18  E-value=1.6e-06  Score=69.19  Aligned_cols=135  Identities=10%  Similarity=0.058  Sum_probs=85.8

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ...++..+++|  +.++.++++++...  .-.++|++||...+....            ....|+.+|...+        
T Consensus       118 ~~~~~~~~~~n--~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la~  183 (271)
T 3ek2_A          118 RENFRIAHDIS--AYSFPALAKAALPMLSDDASLLTLSYLGAERAIP------------NYNTMGLAKAALEASVRYLAV  183 (271)
T ss_dssp             HHHHHHHHHHH--TTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------------TTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhh--HHHHHHHHHHHHHHhccCceEEEEeccccccCCC------------CccchhHHHHHHHHHHHHHHH
Confidence            34455566667  99999999999765  234899999977653211            2356777775433        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+..++||.|..+...... ...+...+....++         ..+...+|+|++++.++..... ..|++++
T Consensus       184 e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedva~~i~~l~s~~~~~~tG~~i~  254 (271)
T 3ek2_A          184 SLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQVGNAGAFLLSDLASGVTAEVMH  254 (271)
T ss_dssp             HHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSEEEE
T ss_pred             HHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHcCcccCCeeeeEEE
Confidence                2799999999999886544321 12233333332221         2256899999999999986433 4578999


Q ss_pred             ecCCCccCHHHHHH
Q 025270          149 LVSDRAVTLDGMAK  162 (255)
Q Consensus       149 i~~~~~~s~~el~~  162 (255)
                      +.+|...++.++.+
T Consensus       255 vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          255 VDSGFNAVVGGMAG  268 (271)
T ss_dssp             ESTTGGGBCCCC--
T ss_pred             ECCCeeeehhhhhh
Confidence            99998777766543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.18  E-value=3.2e-06  Score=67.69  Aligned_cols=124  Identities=8%  Similarity=0.074  Sum_probs=81.9

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..+||++||...+....            ....|+.+|...+      
T Consensus       127 ~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~l  192 (269)
T 4dmm_A          127 RDDWQSVLDLN--LGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP------------GQANYSAAKAGVIGLTKTV  192 (269)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC------------CchhHHHHHHHHHHHHHHH
Confidence            34455666677  888888888874    34556899999976543211            1256777775332      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNI  146 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~  146 (255)
                            .++.+..++||.|..+.....    .........+         ...+.+.+|+|+++..++..+..  ..|++
T Consensus       193 a~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~p---------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~  259 (269)
T 4dmm_A          193 AKELASRGITVNAVAPGFIATDMTSEL----AAEKLLEVIP---------LGRYGEAAEVAGVVRFLAADPAAAYITGQV  259 (269)
T ss_dssp             HHHHGGGTCEEEEEEECCBTTSCSCHH----HHHHHGGGCT---------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCE
T ss_pred             HHHHhhhCcEEEEEEECCCcCcccccc----cHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCCcccCCCcCCE
Confidence                  389999999999988754321    1122222211         12367899999999999987432  35799


Q ss_pred             EEecCCCcc
Q 025270          147 FNLVSDRAV  155 (255)
Q Consensus       147 ~~i~~~~~~  155 (255)
                      +++.+|..+
T Consensus       260 i~vdGG~~~  268 (269)
T 4dmm_A          260 INIDGGLVM  268 (269)
T ss_dssp             EEESTTSCC
T ss_pred             EEECCCeec
Confidence            999988654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.16  E-value=5.1e-06  Score=65.99  Aligned_cols=129  Identities=5%  Similarity=0.034  Sum_probs=81.9

Q ss_pred             ccccceEEecccCcccHHHHHHHH-----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA-----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa-----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------   73 (255)
                      .+.++.++++|  +.++.++++++     ++.+..++|++||...+....            ....|+.+|...      
T Consensus       104 ~~~~~~~~~~n--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  169 (257)
T 3imf_A          104 VNGWNSVINIV--LNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP------------GVIHSAAAKAGVLAMTKT  169 (257)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC------------CcHHHHHHHHHHHHHHHH
Confidence            34455566667  88988888887     344456899999977653321            124576666431      


Q ss_pred             -------hhCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                             ..++.+..++||.|.++......  ...+...+....         ....+...+|+|++++.++..... ..
T Consensus       170 la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          170 LAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV---------PLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS---------TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence                   33899999999999987543210  000111111111         112378999999999999976543 35


Q ss_pred             CCEEEecCCCccC
Q 025270          144 SNIFNLVSDRAVT  156 (255)
Q Consensus       144 ~~~~~i~~~~~~s  156 (255)
                      |+++++.+|..++
T Consensus       241 G~~i~vdGG~~~~  253 (257)
T 3imf_A          241 GTCMTMDGGQHLH  253 (257)
T ss_dssp             SCEEEESTTTTSC
T ss_pred             CCEEEECCCcccC
Confidence            7999999887543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.16  E-value=4.7e-06  Score=66.54  Aligned_cols=123  Identities=8%  Similarity=0.045  Sum_probs=82.1

Q ss_pred             cccceEEecccCcccHHHHHHHHh-----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~-----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.++.++++|  +.++.++++++.     +.+..++|++||...+....            ....|+.+|...+      
T Consensus       126 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~l  191 (267)
T 4iiu_A          126 DDWDAVIHTN--LDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR------------GQVNYSAAKAGIIGATKAL  191 (267)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC------------CCchhHHHHHHHHHHHHHH
Confidence            3445556666  999999988873     44557899999976543211            2256777776322      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            .++.+..++||.|..+.....  ...........+.         ..+...+|+|+++..++..... ..|+++
T Consensus       192 a~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~p~---------~~~~~~edva~~~~~L~s~~~~~itG~~i  260 (267)
T 4iiu_A          192 AIELAKRKITVNCIAPGLIDTGMIEME--ESALKEAMSMIPM---------KRMGQAEEVAGLASYLMSDIAGYVTRQVI  260 (267)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSTTCCCC--HHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHhhcCeEEEEEEEeeecCCccccc--HHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCcccCccCCEE
Confidence                  279999999999988765432  2333343333221         2367899999999999976433 457899


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      ++.+|.
T Consensus       261 ~vdGG~  266 (267)
T 4iiu_A          261 SINGGM  266 (267)
T ss_dssp             EESTTC
T ss_pred             EeCCCc
Confidence            998763

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.15  E-value=3.4e-06  Score=67.74  Aligned_cols=136  Identities=11%  Similarity=0.085  Sum_probs=85.1

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++.++++|  +.++.++++++...    + ..+||++||...+.....        ..+....|+.+|...+       
T Consensus       121 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------~~~~~~~Y~asKaa~~~~~~~la  190 (278)
T 3sx2_A          121 GWHDVIDVN--LTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS--------ADPGSVGYVAAKHGVVGLMRVYA  190 (278)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC--------SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc--------CCCCchHhHHHHHHHHHHHHHHH
Confidence            345556666  88998888887532    2 458999999775532211        0112245777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHH-cCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIV-RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                           .++.+..++||.|.++.........++.... ........++... ..+++.+|+|++++.++..... ..|+++
T Consensus       191 ~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i  269 (278)
T 3sx2_A          191 NLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTL  269 (278)
T ss_dssp             HHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEE
Confidence                 2799999999999988655432222222222 1221222222223 5688999999999999975543 357999


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      ++.+|.
T Consensus       270 ~vdGG~  275 (278)
T 3sx2_A          270 PVDAGF  275 (278)
T ss_dssp             EESTTT
T ss_pred             eECCCc
Confidence            998875

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.15  E-value=1.5e-06  Score=68.65  Aligned_cols=125  Identities=8%  Similarity=-0.024  Sum_probs=78.3

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++..++.|  +.++.++++++.    +.+..++|++||...+....           +....|+.+|...+        
T Consensus        97 ~~~~~~~~n--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~  163 (246)
T 2ag5_A           97 DWDFSMNLN--VRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-----------VNRCVYSTTKAAVIGLTKSVAA  163 (246)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC-----------TTBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC-----------CCCccHHHHHHHHHHHHHHHHH
Confidence            345555666  888888888875    34667999999976553211           01245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc-----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                          .++++.++|||.++++......     .......+....+         ...+.+.+|+|++++.++..... ..|
T Consensus       164 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~v~~l~s~~~~~~tG  234 (246)
T 2ag5_A          164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVYLASDESAYVTG  234 (246)
T ss_dssp             HHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCccccCCCC
Confidence                2899999999999986421100     0111122221111         12378999999999999975433 347


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++++.+|.
T Consensus       235 ~~i~vdgG~  243 (246)
T 2ag5_A          235 NPVIIDGGW  243 (246)
T ss_dssp             CEEEECTTG
T ss_pred             CEEEECCCc
Confidence            899988774

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.15  E-value=3.5e-07  Score=73.87  Aligned_cols=149  Identities=13%  Similarity=0.084  Sum_probs=87.4

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.+.++.++++|  +.++.++++++...  +-.++|++||...+......+..+..+. +....|+.+|...+       
T Consensus       117 ~~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~-~~~~~Y~asK~a~~~~~~~la  193 (287)
T 3pxx_A          117 PVQAFADAFDVD--FVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQG-PGGAGYSYAKQLVDSYTLQLA  193 (287)
T ss_dssp             CTHHHHHHHHHH--THHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhhh--hhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCC-CccchHHHHHHHHHHHHHHHH
Confidence            344556667777  99999999999864  3358999999776543222222222211 12345777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCC-----eeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-----VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                           .++.+..++||.|..+..........+........     ............+.+.+|+|++++.++..... ..
T Consensus       194 ~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~it  273 (287)
T 3pxx_A          194 AQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVT  273 (287)
T ss_dssp             HHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCC
Confidence                 28999999999999876543211000000000000     00000111225688999999999999975543 35


Q ss_pred             CCEEEecCCCcc
Q 025270          144 SNIFNLVSDRAV  155 (255)
Q Consensus       144 ~~~~~i~~~~~~  155 (255)
                      |+++++.+|..+
T Consensus       274 G~~i~vdGG~~~  285 (287)
T 3pxx_A          274 GLQFKVDAGAML  285 (287)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CceEeECchhhh
Confidence            799999988654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.15  E-value=3.9e-06  Score=67.40  Aligned_cols=135  Identities=11%  Similarity=0.017  Sum_probs=82.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+ -.+||++||...+....            ....|+.+|...+    
T Consensus       121 ~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~  186 (277)
T 3tsc_A          121 TPEDFRDVMDIN--VTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP------------FMIHYTASKHAVTGLAR  186 (277)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS------------SCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--HHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC------------CchhhHHHHHHHHHHHH
Confidence            344556667777  8888888887543    22 35899999987653211            2256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCe-eccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                              .++.+..++||.|..+.................... ..... ..+.-+.+.+|+|++++.++..... ..|
T Consensus       187 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~pedvA~~v~~L~s~~~~~itG  265 (277)
T 3tsc_A          187 AFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP-FLPDWVAEPEDIADTVCWLASDESRKVTA  265 (277)
T ss_dssp             HHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC-SSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhh-ccCCCCCCHHHHHHHHHHHhCccccCCcC
Confidence                    279999999999987653321111112111111111 11111 1112388999999999999976543 457


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++++.+|.
T Consensus       266 ~~i~vdGG~  274 (277)
T 3tsc_A          266 AQIPVDQGS  274 (277)
T ss_dssp             CEEEESTTG
T ss_pred             CEEeeCCCc
Confidence            899998875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.14  E-value=6.2e-06  Score=66.41  Aligned_cols=131  Identities=11%  Similarity=-0.027  Sum_probs=84.8

Q ss_pred             ccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++..    .+..++|++||...+....           +....|+.+|...+      
T Consensus       107 ~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~~Y~asKaa~~~l~~~l  173 (280)
T 3tox_A          107 VEGWRETLDTN--LTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF-----------AGVAPYAASKAGLIGLVQAL  173 (280)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC-----------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC-----------CCchhHHHHHHHHHHHHHHH
Confidence            34456666777  8888888887753    3456899999977652110           12356777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCC---cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                            .++.+..++||.|.++.....   ........+....+         ...+.+.+|+|++++.++..... ..|
T Consensus       174 a~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~a~~itG  244 (280)
T 3tox_A          174 AVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---------LKRIARPEEIAEAALYLASDGASFVTG  244 (280)
T ss_dssp             HHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------cCCCcCHHHHHHHHHHHhCccccCCcC
Confidence                  279999999999998754321   11222222222211         12367899999999999986543 457


Q ss_pred             CEEEecCCCccCH
Q 025270          145 NIFNLVSDRAVTL  157 (255)
Q Consensus       145 ~~~~i~~~~~~s~  157 (255)
                      +++++.+|..++.
T Consensus       245 ~~i~vdGG~~~~~  257 (280)
T 3tox_A          245 AALLADGGASVTK  257 (280)
T ss_dssp             CEEEESTTGGGCC
T ss_pred             cEEEECCCccccc
Confidence            9999999876554

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.13  E-value=3.2e-06  Score=67.60  Aligned_cols=128  Identities=8%  Similarity=0.084  Sum_probs=80.8

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      ..++.++++|  +.++.++++++..    .+..++|++||...+....            ....|+.+|...+       
T Consensus       125 ~~~~~~~~~N--~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la  190 (269)
T 3gk3_A          125 GDWDAVMRTD--LDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF------------GQANYASAKAGIHGFTKTLA  190 (269)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC------------CcchHHHHHHHHHHHHHHHH
Confidence            3445556666  8888888887753    4557899999976553211            2256777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..++||.|..+.....     ..........    .......+.+.+|+|+++..++..... ..|++++
T Consensus       191 ~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~  261 (269)
T 3gk3_A          191 LETAKRGITVNTVSPGYLATAMVEAV-----PQDVLEAKIL----PQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLA  261 (269)
T ss_dssp             HHHGGGTEEEEEEEECSBCCTTTTC------------CCSG----GGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEE
T ss_pred             HHhhhcCCEEEEEecCcccchhhhhh-----chhHHHHHhh----hcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEE
Confidence                 279999999999987654321     0111110100    111223467899999999999986643 4579999


Q ss_pred             ecCCCccC
Q 025270          149 LVSDRAVT  156 (255)
Q Consensus       149 i~~~~~~s  156 (255)
                      +.+|..+|
T Consensus       262 vdgG~~~s  269 (269)
T 3gk3_A          262 INGGMHMS  269 (269)
T ss_dssp             ESTTSCCC
T ss_pred             ECCCEeCc
Confidence            99987553

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.13  E-value=2.1e-06  Score=67.90  Aligned_cols=125  Identities=10%  Similarity=0.080  Sum_probs=72.8

Q ss_pred             ccceEEecccCcccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.+++++    +++.+..++|++||...+....            ....|+.+|...+        
T Consensus       105 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la~  170 (249)
T 2ew8_A          105 QWKKTFEIN--VDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE------------AYTHYISTKAANIGFTRALAS  170 (249)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS------------SCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC------------CchhHHHHHHHHHHHHHHHHH
Confidence            345556666  8887777666    5555678999999987764321            1246776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.+..++||.|.++.......... ......  +..     ....+.+.+|+|++++.++..... ..|+++++
T Consensus       171 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~--~~~-----~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~v  242 (249)
T 2ew8_A          171 DLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLPN--MLQ-----AIPRLQVPLDLTGAAAFLASDDASFITGQTLAV  242 (249)
T ss_dssp             HHGGGTEEEEEEEECCC-------------------C--TTS-----SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             HHHhcCcEEEEEecCcCcCccchhccccch-hhHHHH--hhC-----ccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEE
Confidence                28999999999998864321100000 001110  001     112378999999999999975432 34789998


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       243 dGG~  246 (249)
T 2ew8_A          243 DGGM  246 (249)
T ss_dssp             SSSC
T ss_pred             CCCc
Confidence            8875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.13  E-value=1.8e-06  Score=68.43  Aligned_cols=126  Identities=14%  Similarity=0.120  Sum_probs=80.5

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++    ++.+..++|++||...+....            ....|+.+|...+       
T Consensus       113 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la  178 (256)
T 3ezl_A          113 EDWQAVIDTN--LTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF------------GQTNYSTAKAGIHGFTMSLA  178 (256)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC------------CCcccHHHHHHHHHHHHHHH
Confidence            3445566666  88877776665    445667899999976553211            2256777776432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..++||.+..+.... ..+.....+....+         ...+.+.+|+|+++..++..... ..|++++
T Consensus       179 ~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~  248 (256)
T 3ezl_A          179 QEVATKGVTVNTVSPGYIGTDMVKA-IRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWLASEESGFSTGADFS  248 (256)
T ss_dssp             HHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHhCCEEEEEEECcccCccccc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCCcccCCcCcEEE
Confidence                 37899999999997653221 12233333333221         12366899999999999875433 4579999


Q ss_pred             ecCCCcc
Q 025270          149 LVSDRAV  155 (255)
Q Consensus       149 i~~~~~~  155 (255)
                      +.+|..+
T Consensus       249 vdgG~~~  255 (256)
T 3ezl_A          249 LNGGLHM  255 (256)
T ss_dssp             ESTTSCC
T ss_pred             ECCCEeC
Confidence            9988643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.12  E-value=3.7e-06  Score=66.75  Aligned_cols=133  Identities=9%  Similarity=-0.027  Sum_probs=86.5

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.+.++.++++|  +.++.++++++...  .-.++|++||...+....            ....|+.+|...+       
T Consensus       102 ~~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la  167 (255)
T 4eso_A          102 SEASYDRQFAVN--TKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP------------GMSVYSASKAALVSFASVLA  167 (255)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT------------TBHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC------------CchHHHHHHHHHHHHHHHHH
Confidence            344556666777  99999999999764  224899999987654311            2356877776432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCC-cH----HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD-CE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS  144 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~-~~----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  144 (255)
                           .++.+..++||.|..+..... ..    ..+........+         ...+.+.+|+|++++.++.......|
T Consensus       168 ~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~~~itG  238 (255)
T 4eso_A          168 AELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP---------MKRNGTADEVARAVLFLAFEATFTTG  238 (255)
T ss_dssp             HHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHHTCTTCCS
T ss_pred             HHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCcCcCccC
Confidence                 289999999999988754321 11    111111111111         12356899999999998876333457


Q ss_pred             CEEEecCCCccCHHH
Q 025270          145 NIFNLVSDRAVTLDG  159 (255)
Q Consensus       145 ~~~~i~~~~~~s~~e  159 (255)
                      +++++.+|...++.+
T Consensus       239 ~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          239 AKLAVDGGLGQKLST  253 (255)
T ss_dssp             CEEEESTTTTTTBCC
T ss_pred             CEEEECCCccccCcC
Confidence            999999987666543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.12  E-value=7e-06  Score=65.33  Aligned_cols=123  Identities=11%  Similarity=0.084  Sum_probs=75.1

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+        
T Consensus       121 ~~~~~~~vN--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~  186 (260)
T 3gem_A          121 NFTRMFSVH--MLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS------------KHIAYCATKAGLESLTLSFAA  186 (260)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS------------SCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC------------CcHhHHHHHHHHHHHHHHHHH
Confidence            344556666  888888888775    34557899999977653311            2256777775432        


Q ss_pred             -h--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           75 -N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        75 -~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                       +  ++.+..++||.+..+.....   .+...+....++         .-+...+|+|++++.+++... ..|+++++.+
T Consensus       187 e~~~~Irvn~v~PG~v~t~~~~~~---~~~~~~~~~~p~---------~r~~~~edva~~v~~L~~~~~-itG~~i~vdG  253 (260)
T 3gem_A          187 RFAPLVKVNGIAPALLMFQPKDDA---AYRANALAKSAL---------GIEPGAEVIYQSLRYLLDSTY-VTGTTLTVNG  253 (260)
T ss_dssp             HHTTTCEEEEEEECTTCC------------------CCS---------CCCCCTHHHHHHHHHHHHCSS-CCSCEEEEST
T ss_pred             HHCCCCEEEEEeecccccCCCCCH---HHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhhCCC-CCCCEEEECC
Confidence             2  58899999999987643211   111222222111         124568999999999995433 3479999999


Q ss_pred             CCccC
Q 025270          152 DRAVT  156 (255)
Q Consensus       152 ~~~~s  156 (255)
                      |..++
T Consensus       254 G~~~~  258 (260)
T 3gem_A          254 GRHVK  258 (260)
T ss_dssp             TTTTC
T ss_pred             CcccC
Confidence            87654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.12  E-value=1.7e-06  Score=68.56  Aligned_cols=125  Identities=8%  Similarity=0.087  Sum_probs=80.0

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++.    +.+..++|++||...+...            +....|+.+|...+       
T Consensus        95 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  160 (254)
T 1zmt_A           95 EDYRGAVEAL--QIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------KELSTYTSARAGACTLANALS  160 (254)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC------------CCchHHHHHHHHHHHHHHHHH
Confidence            3445566666  888888888774    3455789999997765321            12256777765432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHH-------HHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWF-------FDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                           .++.+..++||.|+|+......-..+       ...+....         ....+.+.+|+|++++.++..... 
T Consensus       161 ~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s~~~~~  231 (254)
T 1zmt_A          161 KELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT---------ALQRLGTQKELGELVAFLASGSCDY  231 (254)
T ss_dssp             HHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS---------SSSSCBCHHHHHHHHHHHHTTSCGG
T ss_pred             HHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC---------CCCCCcCHHHHHHHHHHHhCcccCC
Confidence                 28999999999998876443211111       11111111         011267899999999999986543 


Q ss_pred             CCCCEEEecCCC
Q 025270          142 ASSNIFNLVSDR  153 (255)
Q Consensus       142 ~~~~~~~i~~~~  153 (255)
                      ..|+++++.+|.
T Consensus       232 ~tG~~~~vdgG~  243 (254)
T 1zmt_A          232 LTGQVFWLAGGF  243 (254)
T ss_dssp             GTTCEEEESTTC
T ss_pred             ccCCEEEECCCc
Confidence            357899998875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.11  E-value=3.3e-06  Score=66.57  Aligned_cols=124  Identities=10%  Similarity=0.095  Sum_probs=76.4

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      +.++.+++.|  +.++.++.+++    ++.+..++|++||...+...            +....|..+|...        
T Consensus       104 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~la  169 (246)
T 2uvd_A          104 EEWDTVINTN--LKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN------------PGQANYVAAKAGVIGLTKTSA  169 (246)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------TTBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC------------CCCchHHHHHHHHHHHHHHHH
Confidence            3445556666  77755555554    44567899999997654321            1124577666532        


Q ss_pred             ----hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           74 ----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        74 ----e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          ..++.+.+++||.+.++..... .......+....+         ...+++.+|+|++++.++..... ..|++++
T Consensus       170 ~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  239 (246)
T 2uvd_A          170 KELASRNITVNAIAPGFIATDMTDVL-DENIKAEMLKLIP---------AAQFGEAQDIANAVTFFASDQSKYITGQTLN  239 (246)
T ss_dssp             HHHGGGTEEEEEEEECSBGGGCSSCC-CTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhhcCeEEEEEEeccccCcchhhc-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence                2389999999999987643221 1111122222111         12378999999999999975433 3478999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       240 vdgG~  244 (246)
T 2uvd_A          240 VDGGM  244 (246)
T ss_dssp             ESTTS
T ss_pred             ECcCc
Confidence            88874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.11  E-value=1.8e-06  Score=68.66  Aligned_cols=132  Identities=9%  Similarity=-0.012  Sum_probs=72.7

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCC--------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSG--------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~--------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.++.++++|  +.++.++++++...-        ..++|++||...+....            ....|+.+|...+   
T Consensus       106 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~  171 (261)
T 3n74_A          106 EEFDRIVGVN--VRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP------------NLAWYNATKGWVVSVT  171 (261)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT------------TCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC------------CccHHHHHHHHHHHHH
Confidence            3344556666  888888877775331        34699999976553211            2245777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               .++.+..++||.+..+.....     ...... ..............+++.+|+|+++..++..... ..|
T Consensus       172 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG  245 (261)
T 3n74_A          172 KALAIELAPAKIRVVALNPVAGETPLLTTF-----MGEDSE-EIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITG  245 (261)
T ss_dssp             HHHHHHHGGGTEEEEEEEEC-------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHhhhcCcEEEEEecCcccChhhhhh-----cccCcH-HHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCC
Confidence                     378999999999987643321     000000 0000111112233578999999999999975433 357


Q ss_pred             CEEEecCCCccCH
Q 025270          145 NIFNLVSDRAVTL  157 (255)
Q Consensus       145 ~~~~i~~~~~~s~  157 (255)
                      +++++.+|..++.
T Consensus       246 ~~i~vdgG~~~~~  258 (261)
T 3n74_A          246 VALDVDGGRSIGG  258 (261)
T ss_dssp             CEEEESTTTTC--
T ss_pred             cEEEecCCcccCC
Confidence            9999999886654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.11  E-value=7.4e-06  Score=63.54  Aligned_cols=127  Identities=11%  Similarity=0.043  Sum_probs=82.7

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++..++.|  +.++.++++++...-  -.++|++||...+....            ....|+.+|...+        
T Consensus        81 ~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la~  146 (223)
T 3uce_A           81 VTQAKYAFDTK--FWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------------NTYVKAAINAAIEATTKVLAK  146 (223)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhheee--eeeHHHHHHHHHhhccCCeEEEEecchhhccCCC------------CchHHHHHHHHHHHHHHHHHH
Confidence            34455566667  999999999998652  24899999987664321            2256777775432        


Q ss_pred             -h-CCceEEEecCcccCCCCCCCc---HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEe
Q 025270           75 -N-FSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  149 (255)
Q Consensus        75 -~-~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i  149 (255)
                       . .+.+..++||.+..+......   ...+........+         ...+.+.+|+|++++.++... ...|+++++
T Consensus       147 e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~-~~tG~~i~v  216 (223)
T 3uce_A          147 ELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP---------VGKVGEASDIAMAYLFAIQNS-YMTGTVIDV  216 (223)
T ss_dssp             HHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHHCT-TCCSCEEEE
T ss_pred             hhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC---------CCCccCHHHHHHHHHHHccCC-CCCCcEEEe
Confidence             2 388999999999887433321   1112222222221         123678999999999999853 334799999


Q ss_pred             cCCCcc
Q 025270          150 VSDRAV  155 (255)
Q Consensus       150 ~~~~~~  155 (255)
                      .+|..+
T Consensus       217 dgG~~~  222 (223)
T 3uce_A          217 DGGALL  222 (223)
T ss_dssp             STTGGG
T ss_pred             cCCeec
Confidence            988654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.10  E-value=1e-06  Score=70.68  Aligned_cols=128  Identities=6%  Similarity=-0.011  Sum_probs=81.8

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+-.+||++||...+....            ....|+.+|...+     
T Consensus       125 ~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  190 (270)
T 3ftp_A          125 KDDEWDAVIDTN--LKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP------------GQVNYAAAKAGVAGMTRA  190 (270)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TBHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC------------CchhHHHHHHHHHHHHHH
Confidence            344556667777  9999999888753    3446899999977553211            2256777776322     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+..++||.|..+.... ........+....         ....+.+.+|+|++++.++..... ..|++
T Consensus       191 la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~  260 (270)
T 3ftp_A          191 LAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTALKTQI---------PLGRLGSPEDIAHAVAFLASPQAGYITGTT  260 (270)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCCCcCCccCcE
Confidence                   27999999999987652211 1111122222221         122467999999999999865433 35799


Q ss_pred             EEecCCCcc
Q 025270          147 FNLVSDRAV  155 (255)
Q Consensus       147 ~~i~~~~~~  155 (255)
                      +++.+|..+
T Consensus       261 i~vdGG~~~  269 (270)
T 3ftp_A          261 LHVNGGMFM  269 (270)
T ss_dssp             EEESTTSSC
T ss_pred             EEECCCccc
Confidence            999988654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.10  E-value=5.7e-06  Score=66.50  Aligned_cols=129  Identities=7%  Similarity=0.026  Sum_probs=81.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+++|...+      
T Consensus       122 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  187 (277)
T 4dqx_A          122 EETWDRIMSVN--VKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA------------DRTAYVASKGAISSLTRAM  187 (277)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC------------CChhHHHHHHHHHHHHHHH
Confidence            34455666677  888887777774    44567999999987664311            2356777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 ------NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                            .++.+..++||.|..+....     ............         ......+.+.+|+|++++.++..... .
T Consensus       188 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~~~~~i  258 (277)
T 4dqx_A          188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNA---------RAVMDRMGTAEEIAEAMLFLASDRSRFA  258 (277)
T ss_dssp             HHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHT---------TSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHh---------cCcccCCcCHHHHHHHHHHHhCCccCCC
Confidence                  27899999999987652100     000011111111         11223467899999999999976543 3


Q ss_pred             CCCEEEecCCCccC
Q 025270          143 SSNIFNLVSDRAVT  156 (255)
Q Consensus       143 ~~~~~~i~~~~~~s  156 (255)
                      .|+++++.+|..++
T Consensus       259 tG~~i~vdGG~~~~  272 (277)
T 4dqx_A          259 TGSILTVDGGSSIG  272 (277)
T ss_dssp             CSCEEEESSSSSSC
T ss_pred             cCCEEEECCchhhh
Confidence            57999999887543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.09  E-value=1.3e-06  Score=70.92  Aligned_cols=139  Identities=9%  Similarity=0.011  Sum_probs=86.0

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      +.++.++++|  +.++.++++++..    .+ .+||++||...+....           +....|+.+|...        
T Consensus       130 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la  195 (297)
T 1xhl_A          130 ELYQKTFKLN--FQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH-----------SGYPYYACAKAALDQYTRCTA  195 (297)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC-----------TTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHh--hHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC-----------CCcchHHHHHHHHHHHHHHHH
Confidence            3445566666  8888888877764    34 6899999987664320           1224677666543        


Q ss_pred             ----hhCCceEEEecCcccCCCCCCC--cH------HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC-C
Q 025270           74 ----ENFSNWASFRPQYMIGSGNNKD--CE------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E  140 (255)
Q Consensus        74 ----e~~~~~~ilRp~~v~G~~~~~~--~~------~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~  140 (255)
                          ..++.+.+++||.|.++.....  ..      ..+...+...  .       ....+...+|+|++++.++... .
T Consensus       196 ~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~~~pedvA~~v~~l~s~~~~  266 (297)
T 1xhl_A          196 IDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC--I-------PVGHCGKPEEIANIIVFLADRNLS  266 (297)
T ss_dssp             HHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C-------TTSSCBCHHHHHHHHHHHHCHHHH
T ss_pred             HHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc--C-------CCCCCcCHHHHHHHHHHHhCCccc
Confidence                2389999999999987632111  00      0111111111  1       1123789999999999998754 2


Q ss_pred             -cCCCCEEEecCCCccCHHHHHHHHHHH
Q 025270          141 -AASSNIFNLVSDRAVTLDGMAKLCAQA  167 (255)
Q Consensus       141 -~~~~~~~~i~~~~~~s~~el~~~i~~~  167 (255)
                       ...|+++++.+|......+.+..+.+.
T Consensus       267 ~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          267 SYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             TTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             CCccCcEEEECCCccccccccccchhhh
Confidence             234789999998776666655444443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.07  E-value=2.8e-06  Score=66.92  Aligned_cols=127  Identities=6%  Similarity=0.020  Sum_probs=82.0

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.+.++.++++|  +.++.++++++...-.  .++|++||...+....            ....|+.+|...+       
T Consensus        90 ~~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la  155 (244)
T 4e4y_A           90 DIESIKKVLDLN--VWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP------------NSFAYTLSKGAIAQMTKSLA  155 (244)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT------------TBHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHc--cHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC------------CCchhHHHHHHHHHHHHHHH
Confidence            344455666777  9999999999886522  4899999987663311            2256777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHH-----------HHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEW-----------FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                           .++.+..++||.|.++.... ....           ........         .....+.+.+|+|++++.++..
T Consensus       156 ~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s~  225 (244)
T 4e4y_A          156 LDLAKYQIRVNTVCPGTVDTDLYRN-LIQKYANNVGISFDEAQKQEEKE---------FPLNRIAQPQEIAELVIFLLSD  225 (244)
T ss_dssp             HHHGGGTCEEEEEEESCBCCHHHHH-HHHHHHHHHTCCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHcCeEEEEEecCccCchhhHH-HHHhhhhhcCCCHHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHHhcC
Confidence                 38999999999997653211 0000           11111111         1123478899999999999986


Q ss_pred             CCc-CCCCEEEecCCCc
Q 025270          139 PEA-ASSNIFNLVSDRA  154 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~~  154 (255)
                      ... ..|+++++.+|..
T Consensus       226 ~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          226 KSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             ccccccCCeEeECCCcc
Confidence            543 3578999988753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.07  E-value=9.2e-06  Score=65.70  Aligned_cols=136  Identities=7%  Similarity=-0.121  Sum_probs=81.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC-CCCCCCCCCCCCCCCChhHHHHHHHhh-------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEKYISEN-------   75 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~-~~~~~~E~~~~~~~~~~y~~ek~~~e~-------   75 (255)
                      +.+.++.++++|  +.++.++++++.....+|+|++||...+... ......++....+....|+.+|.+.+.       
T Consensus       104 ~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  181 (291)
T 3rd5_A          104 TVDGFESQIGTN--HLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQR  181 (291)
T ss_dssp             CTTSCBHHHHHH--THHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHH
Confidence            455667777777  9999999999998877899999998876432 111122221112223568888765331       


Q ss_pred             -----C--CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           76 -----F--SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        76 -----~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                           +  +.+..++||.|..+..... ...+... ...    .    ...+-....+|+|++++.++..+ ...|+.++
T Consensus       182 e~~~~g~~i~v~~v~PG~v~T~~~~~~-~~~~~~~-~~~----~----~~~~~~~~~~~~A~~~~~l~~~~-~~~G~~~~  250 (291)
T 3rd5_A          182 RLTAAGSPLRALAAHPGYSHTNLQGAS-GRKLGDA-LMS----A----ATRVVATDADFGARQTLYAASQD-LPGDSFVG  250 (291)
T ss_dssp             HHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHHHHHHHHHHHHHSC-CCTTCEEE
T ss_pred             HHhhCCCCEEEEEeeCCCCcccccccc-chHHHHH-HHH----H----HHHHHhCCHHHHHHHHHHHHcCC-CCCCceeC
Confidence                 4  8999999999977643321 0011111 000    0    01122345899999999999875 34468888


Q ss_pred             ecCC
Q 025270          149 LVSD  152 (255)
Q Consensus       149 i~~~  152 (255)
                      +.+|
T Consensus       251 vdgG  254 (291)
T 3rd5_A          251 PRFG  254 (291)
T ss_dssp             ETTS
T ss_pred             Cccc
Confidence            7654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.06  E-value=2.9e-06  Score=67.64  Aligned_cols=125  Identities=7%  Similarity=0.050  Sum_probs=80.4

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++...    + .++|++||...+....            ....|+.+|...+       
T Consensus       111 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la  175 (264)
T 3ucx_A          111 EHMRDAIELT--VFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQA------------KYGAYKMAKSALLAMSQTLA  175 (264)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCC------------ccHHHHHHHHHHHHHHHHHH
Confidence            4455566666  88988888887532    3 5899999987653211            1256777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCc----------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDC----------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                           .++.+..++||.|+++......          ...+...+..+         .....+.+.+|+|++++.++...
T Consensus       176 ~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~L~s~~  246 (264)
T 3ucx_A          176 TELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAG---------SDLKRLPTEDEVASAILFMASDL  246 (264)
T ss_dssp             HHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTT---------SSSSSCCBHHHHHHHHHHHHSGG
T ss_pred             HHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhcc---------CCcccCCCHHHHHHHHHHHcCcc
Confidence                 3899999999999876322110          01111222221         12234789999999999998755


Q ss_pred             Cc-CCCCEEEecCCCc
Q 025270          140 EA-ASSNIFNLVSDRA  154 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~~  154 (255)
                      .. ..|+++++.+|..
T Consensus       247 ~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          247 ASGITGQALDVNCGEY  262 (264)
T ss_dssp             GTTCCSCEEEESTTSS
T ss_pred             ccCCCCCEEEECCCcc
Confidence            43 3579999998864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.06  E-value=2.1e-06  Score=67.81  Aligned_cols=125  Identities=11%  Similarity=0.095  Sum_probs=76.3

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+..++|++||...+...            +....|+.+|...+       
T Consensus       103 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  168 (247)
T 1uzm_A          103 EKFEKVINAN--LTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI------------GNQANYAASKAGVIGMARSIA  168 (247)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC------------CCChhHHHHHHHHHHHHHHHH
Confidence            3455556666  888888888775    3567899999997644211            11245776665322       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+.+++||.+.++.... .............         ....+++.+|+|++++.++..... ..|++++
T Consensus       169 ~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~  238 (247)
T 1uzm_A          169 RELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFI---------PAKRVGTPAEVAGVVSFLASEDASYISGAVIP  238 (247)
T ss_dssp             HHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCccccCCcCCEEE
Confidence                 38999999999987642110 0011111111111         112378999999999999975433 3478999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       239 vdgG~~  244 (247)
T 1uzm_A          239 VDGGMG  244 (247)
T ss_dssp             ESTTTT
T ss_pred             ECCCcc
Confidence            988754

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.05  E-value=3.5e-06  Score=67.05  Aligned_cols=125  Identities=10%  Similarity=0.038  Sum_probs=77.9

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      .++..++.|  +.++.++++++...          +..+||++||...+....            ....|+.+|...+  
T Consensus       115 ~~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~  180 (265)
T 2o23_A          115 DFQRVLDVN--LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSASKGGIVGM  180 (265)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC------------CCchhHHHHHHHHHH
Confidence            344555666  88999999888754          567899999987664321            1256777765322  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCC
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS  144 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  144 (255)
                                .++.+.+++||.+.++..... ...+...+....  +.      ...+++.+|+|++++.++.... ..|
T Consensus       181 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~--~~------~~~~~~~~dva~~~~~l~~~~~-~~G  250 (265)
T 2o23_A          181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-PEKVCNFLASQV--PF------PSRLGDPAEYAHLVQAIIENPF-LNG  250 (265)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTC--SS------SCSCBCHHHHHHHHHHHHHCTT-CCS
T ss_pred             HHHHHHHHhhcCcEEEEEEeccccCcccccc-CHHHHHHHHHcC--CC------cCCCCCHHHHHHHHHHHhhcCc-cCc
Confidence                      279999999999987643221 000111111111  11      0236899999999999997543 346


Q ss_pred             CEEEecCCCcc
Q 025270          145 NIFNLVSDRAV  155 (255)
Q Consensus       145 ~~~~i~~~~~~  155 (255)
                      +++++.+|..+
T Consensus       251 ~~i~vdgG~~~  261 (265)
T 2o23_A          251 EVIRLDGAIRM  261 (265)
T ss_dssp             CEEEESTTCCC
T ss_pred             eEEEECCCEec
Confidence            89999887643

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.05  E-value=1.4e-05  Score=63.03  Aligned_cols=123  Identities=9%  Similarity=0.075  Sum_probs=78.4

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .++.+++.|  +.++.++++++..    .+..++|++||...++..             ....|..+|...         
T Consensus       100 ~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------~~~~Y~asK~a~~~~~~~la~  164 (245)
T 1uls_A          100 DWELVLRVN--LTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-------------GQANYAASMAGVVGLTRTLAL  164 (245)
T ss_dssp             HHHHHHHHH--HHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC-------------CchhHHHHHHHHHHHHHHHHH
Confidence            344555666  8888888777754    366899999998744321             124577666532         


Q ss_pred             ---hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           74 ---ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         ..++.+.+++||.+..+.... .............+  .       ..+++.+|+|++++.++..... ..|+++.+
T Consensus       165 e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~p--~-------~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~v  234 (245)
T 1uls_A          165 ELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATP--L-------GRAGKPLEVAYAALFLLSDESSFITGQVLFV  234 (245)
T ss_dssp             HHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCT--T-------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhhCC--C-------CCCcCHHHHHHHHHHHhCchhcCCcCCEEEE
Confidence               238999999999998765332 11122222222211  1       1267999999999999975433 34789998


Q ss_pred             cCCCc
Q 025270          150 VSDRA  154 (255)
Q Consensus       150 ~~~~~  154 (255)
                      .+|..
T Consensus       235 dgG~~  239 (245)
T 1uls_A          235 DGGRT  239 (245)
T ss_dssp             STTTT
T ss_pred             CCCcc
Confidence            88753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.05  E-value=8.3e-06  Score=64.41  Aligned_cols=126  Identities=7%  Similarity=0.019  Sum_probs=82.5

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+..++|++||...+....            ....|+.+|...+     
T Consensus       103 ~~~~~~~~~~vN--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~  168 (248)
T 3op4_A          103 KEEEWSDIMETN--LTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA------------GQANYAAAKAGVIGFTKS  168 (248)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC------------CChHHHHHHHHHHHHHHH
Confidence            344556666777  8998888888753    4557899999976543211            2256777775322     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+..++||.+..+..... ............+         ...+.+.+|+|+++..++..... ..|++
T Consensus       169 la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~~~~itG~~  238 (248)
T 3op4_A          169 MAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATLAQVP---------AGRLGDPREIASAVAFLASPEAAYITGET  238 (248)
T ss_dssp             HHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCCccCCccCcE
Confidence                   279999999999987654321 1222222222211         12367999999999999875543 35799


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +++.+|.
T Consensus       239 i~vdgG~  245 (248)
T 3op4_A          239 LHVNGGM  245 (248)
T ss_dssp             EEESTTS
T ss_pred             EEECCCe
Confidence            9998875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.05  E-value=4.4e-06  Score=67.90  Aligned_cols=137  Identities=12%  Similarity=0.034  Sum_probs=82.9

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC-----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS-----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~-----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.+.++.++++|  +.++.++++++...     +..+||++||...+....            ....|+++|...+    
T Consensus       138 ~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~  203 (299)
T 3t7c_A          138 DPKTWRDMIDVN--LNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE------------NIGNYIASKHGLHGLMR  203 (299)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC------------CcchHHHHHHHHHHHHH
Confidence            344556677777  88988888886532     356899999977653211            2256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCee------ccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVP------IPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~------i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                              .++.+..++||.|..+..........+..........      .... .....+...+|+|++++.++....
T Consensus       204 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~pedvA~~v~fL~s~~a  282 (299)
T 3t7c_A          204 TMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMH-VLPIPYVEPADISNAILFLVSDDA  282 (299)
T ss_dssp             HHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHS-SSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhc-ccCcCCCCHHHHHHHHHHHhCccc
Confidence                    2799999999999887644311000000000000000      0000 011347799999999999997654


Q ss_pred             c-CCCCEEEecCCCcc
Q 025270          141 A-ASSNIFNLVSDRAV  155 (255)
Q Consensus       141 ~-~~~~~~~i~~~~~~  155 (255)
                      . ..|+++++.+|..+
T Consensus       283 ~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          283 RYITGVSLPVDGGALL  298 (299)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             ccCcCCEEeeCCCccc
Confidence            3 45799999988643

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.05  E-value=1.7e-05  Score=64.32  Aligned_cols=128  Identities=10%  Similarity=-0.003  Sum_probs=84.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++.++++|  +.++.++++++...-  -.++|++||...+....            ....|+++|...+        
T Consensus       133 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaal~~l~~~la~  198 (296)
T 3k31_A          133 LGNFLTSMHIS--CYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP------------HYNVMGVCKAALEASVKYLAV  198 (296)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT------------TTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC------------CchhhHHHHHHHHHHHHHHHH
Confidence            34455666667  999999999998642  34899999977653211            2256777775432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+..++||.|..+...... ............++         ..+...+|+|++++.++..... ..|++++
T Consensus       199 e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~fL~s~~a~~itG~~i~  269 (296)
T 3k31_A          199 DLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVGGAALYLLSDLGRGTTGETVH  269 (296)
T ss_dssp             HHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCCccCCccCCEEE
Confidence                2799999999999987644321 11222222222211         1256789999999999985433 4579999


Q ss_pred             ecCCCcc
Q 025270          149 LVSDRAV  155 (255)
Q Consensus       149 i~~~~~~  155 (255)
                      +.+|..+
T Consensus       270 vdGG~~~  276 (296)
T 3k31_A          270 VDCGYHV  276 (296)
T ss_dssp             ESTTGGG
T ss_pred             ECCCccc
Confidence            9988644

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.04  E-value=5.5e-06  Score=66.51  Aligned_cols=123  Identities=8%  Similarity=0.020  Sum_probs=77.5

Q ss_pred             ceEEecccCccc----HHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------
Q 025270            9 KALFRTNNNFRL----QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------   75 (255)
Q Consensus         9 d~~~~~~~n~~~----~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------   75 (255)
                      +.+++.|  +.+    +++++..+++.+.++||++||...+....          .+....|+.+|...+.         
T Consensus       138 ~~~~~~N--~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~~~Y~~sK~a~~~~~~~la~e~  205 (279)
T 3ctm_A          138 NKIISVD--LNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI----------PQLQAPYNTAKAACTHLAKSLAIEW  205 (279)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-------------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHH--hHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC----------CCCcccHHHHHHHHHHHHHHHHHHh
Confidence            3445555  777    67888888877778999999977543210          1122557776654432         


Q ss_pred             ---CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           76 ---FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        76 ---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                         + .+.+++||.+.++..... .......+....+         ...+++.+|+|+++..++..... ..|+++++.+
T Consensus       206 ~~~~-~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          206 APFA-RVNTISPGYIDTDITDFA-SKDMKAKWWQLTP---------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDG  274 (279)
T ss_dssp             TTTC-EEEEEEECSBSSTTTSSC-CHHHHHHHHHHST---------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccC-CEEEEeccCCcccccccc-ChHHHHHHHHhCC---------ccCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence               5 889999999987754321 1122222221111         12378999999999999976432 3478999998


Q ss_pred             CCc
Q 025270          152 DRA  154 (255)
Q Consensus       152 ~~~  154 (255)
                      |..
T Consensus       275 G~~  277 (279)
T 3ctm_A          275 GYT  277 (279)
T ss_dssp             TCC
T ss_pred             Cee
Confidence            753

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.04  E-value=9e-06  Score=64.35  Aligned_cols=127  Identities=10%  Similarity=0.066  Sum_probs=74.2

Q ss_pred             ccceEEecccCcccHH----HHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~----~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.    .++..+++.+ .++|++||...+....            ....|+.+|...+        
T Consensus       103 ~~~~~~~~N--~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~  167 (253)
T 1hxh_A          103 DFSRLLKIN--TESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE------------QYAGYSASKAAVSALTRAAAL  167 (253)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh--cHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC------------CCccHHHHHHHHHHHHHHHHH
Confidence            344455555  55544    4555566667 8999999987764311            2245666665321        


Q ss_pred             ----h--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ----N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ----~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                          .  ++++.++|||.++++...................     .......+.+.+|+|++++.++..... ..|+++
T Consensus       168 e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  242 (253)
T 1hxh_A          168 SCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP-----KLNRAGRAYMPERIAQLVLFLASDESSVMSGSEL  242 (253)
T ss_dssp             HHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT-----TTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhh-----ccCccCCCCCHHHHHHHHHHHcCccccCCCCcEE
Confidence                3  7999999999998863211000000001011100     001113478999999999999986533 347899


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      ++.+|.
T Consensus       243 ~vdgG~  248 (253)
T 1hxh_A          243 HADNSI  248 (253)
T ss_dssp             EESSSC
T ss_pred             EECCCc
Confidence            988875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.03  E-value=6.2e-06  Score=65.46  Aligned_cols=126  Identities=9%  Similarity=0.064  Sum_probs=78.4

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.++.+++.|  +.++.++++++..    .+. .+||++||...+...            +....|+.+|...+      
T Consensus       103 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l  168 (258)
T 3a28_C          103 EDLKQIYSVN--VFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF------------PILSAYSTTKFAVRGLTQAA  168 (258)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc--cHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC------------CCchhHHHHHHHHHHHHHHH
Confidence            3445556666  8888888888765    355 799999998765321            11256777665432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcH-----------HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCE-----------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                            .++.+.+++||.+..+.... ..           ......+...         .....+.+.+|+|++++.++.
T Consensus       169 a~e~~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l~s  238 (258)
T 3a28_C          169 AQELAPKGHTVNAYAPGIVGTGMWEQ-IDAELSKINGKPIGENFKEYSSS---------IALGRPSVPEDVAGLVSFLAS  238 (258)
T ss_dssp             HHHHGGGTCEEEEEEECCBCSHHHHH-HHHHHHHHHCCCTTHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHhhCeEEEEEECCccCChhhhh-hhhhhccccCCchHHHHHHHHhc---------CCCCCccCHHHHHHHHHHHhC
Confidence                  28999999999886642110 00           0011111111         111237899999999999997


Q ss_pred             CCCc-CCCCEEEecCCCcc
Q 025270          138 NPEA-ASSNIFNLVSDRAV  155 (255)
Q Consensus       138 ~~~~-~~~~~~~i~~~~~~  155 (255)
                      .... ..|+++++.+|..+
T Consensus       239 ~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          239 ENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GGGTTCCSCEEEESSSSCC
T ss_pred             cccCCCCCCEEEECCCEec
Confidence            5533 34789999887643

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.03  E-value=6.1e-06  Score=66.44  Aligned_cols=128  Identities=9%  Similarity=0.002  Sum_probs=74.2

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC----C---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS----G---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~----~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      +.+.++.++++|  +.++.++++++...    +   ..+||++||...+....            ....|+.+|...+  
T Consensus       129 ~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l  194 (280)
T 4da9_A          129 KPENFDTIVGVN--LRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP------------ERLDYCMSKAGLAAF  194 (280)
T ss_dssp             CHHHHHHHTTTH--HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------------CCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC------------CccHHHHHHHHHHHH
Confidence            344566677777  88888888777643    2   45899999976553211            1256777775432  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                                .++.+..++||.|..+..... ..........+        ......+...+|+|++++.++..... ..
T Consensus       195 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L~s~~~~~it  265 (280)
T 4da9_A          195 SQGLALRLAETGIAVFEVRPGIIRSDMTAAV-SGKYDGLIESG--------LVPMRRWGEPEDIGNIVAGLAGGQFGFAT  265 (280)
T ss_dssp             HHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHHTSTTGGGT
T ss_pred             HHHHHHHHHHhCcEEEEEeecCCcCCchhhc-chhHHHHHhhc--------CCCcCCcCCHHHHHHHHHHHhCccccCCC
Confidence                      378999999999987643321 11111111110        11123467899999999999986654 45


Q ss_pred             CCEEEecCCCc
Q 025270          144 SNIFNLVSDRA  154 (255)
Q Consensus       144 ~~~~~i~~~~~  154 (255)
                      |+++++.+|..
T Consensus       266 G~~i~vdGG~~  276 (280)
T 4da9_A          266 GSVIQADGGLS  276 (280)
T ss_dssp             TCEEEESTTCC
T ss_pred             CCEEEECCCcc
Confidence            79999998864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.02  E-value=4.7e-06  Score=67.04  Aligned_cols=125  Identities=14%  Similarity=0.093  Sum_probs=80.3

Q ss_pred             cccceEEecccCcccHHHHHHHHhh------CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS------SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~------~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.++.++++|  +.++.++++++..      .+..++|++||...+....            ....|+.+|...+     
T Consensus       123 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  188 (279)
T 3sju_A          123 ALWADVLDTN--LTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM------------YAAPYTASKHGVVGFTKS  188 (279)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC------------CChhHHHHHHHHHHHHHH
Confidence            3455566666  9999999988754      3557899999987653211            1256777775332     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC----------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                             .++.+..++||.|.++.....          ........+....         ....+.+.+|+|+++..++.
T Consensus       189 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s  259 (279)
T 3sju_A          189 VGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---------PLGRYSTPEEVAGLVGYLVT  259 (279)
T ss_dssp             HHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhC
Confidence                   378999999999976521100          0111122222211         12346789999999999998


Q ss_pred             CCCc-CCCCEEEecCCC
Q 025270          138 NPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       138 ~~~~-~~~~~~~i~~~~  153 (255)
                      .... ..|+++++.+|.
T Consensus       260 ~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          260 DAAASITAQALNVCGGL  276 (279)
T ss_dssp             SGGGGCCSCEEEESTTC
T ss_pred             ccccCcCCcEEEECCCc
Confidence            6543 457999998875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.01  E-value=2.3e-06  Score=68.35  Aligned_cols=133  Identities=11%  Similarity=0.130  Sum_probs=79.5

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++.+++    ++.+..++|++||...+....            ....|+.+|...+      
T Consensus       106 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  171 (267)
T 3t4x_A          106 DEDWFKLFEVN--IMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ------------EMAHYSATKTMQLSLSRSL  171 (267)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC------------cchHHHHHHHHHHHHHHHH
Confidence            34455566667  88866665554    445667999999987663211            2356777775433      


Q ss_pred             ---h---CCceEEEecCcccCCCCCC----------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 ---N---FSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 ---~---~~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                         .   ++.+..++||.+..+....          ..............   .+  ......+.+.+|+|+++..++..
T Consensus       172 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~r~~~pedvA~~v~fL~s~  246 (267)
T 3t4x_A          172 AELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN---RP--TSIIQRLIRPEEIAHLVTFLSSP  246 (267)
T ss_dssp             HHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH---CT--TCSSCSCBCTHHHHHHHHHHHSG
T ss_pred             HHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc---CC--cccccCccCHHHHHHHHHHHcCc
Confidence               1   6889999999887642100          00011111111110   00  01123478999999999999885


Q ss_pred             CCc-CCCCEEEecCCCccC
Q 025270          139 PEA-ASSNIFNLVSDRAVT  156 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~~~s  156 (255)
                      ... ..|+++++.+|...+
T Consensus       247 ~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          247 LSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             GGTTCCSCEEEESTTCSCS
T ss_pred             cccCccCCeEEECCCcccc
Confidence            433 457999999887554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.01  E-value=7e-06  Score=65.27  Aligned_cols=130  Identities=9%  Similarity=0.006  Sum_probs=78.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCCc--ceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSGV--KQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .+.++.++++|  +.++.++++++...-.  .++|++||...+ ....            ....|+.+|...+       
T Consensus       108 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~~~~Y~asKaa~~~l~~~la  173 (259)
T 3edm_A          108 EAFWHQVLDVN--LTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP------------GALAYATSKGAVMTFTRGLA  173 (259)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC------------CcHHHHHHHHHHHHHHHHHH
Confidence            34455666777  9999999999987632  389999998766 2211            2256777775433       


Q ss_pred             --h--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 --N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 --~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        .  .+.+..++||.|..+.............+         ........+.+.+|+|+++..++..... ..|+++++
T Consensus       174 ~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~v  244 (259)
T 3edm_A          174 KEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDI  244 (259)
T ss_dssp             HHHTTTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHCCCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEE
Confidence              2  48889999999977643221101111111         1112223467899999999999976543 35799999


Q ss_pred             cCCCccCH
Q 025270          150 VSDRAVTL  157 (255)
Q Consensus       150 ~~~~~~s~  157 (255)
                      .+|...+.
T Consensus       245 dGg~~~~~  252 (259)
T 3edm_A          245 NGGVLFSE  252 (259)
T ss_dssp             SBCSSBC-
T ss_pred             CCCcCCCC
Confidence            98875443

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.01  E-value=1.1e-05  Score=64.68  Aligned_cols=127  Identities=9%  Similarity=0.019  Sum_probs=77.2

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCc----ceEEEeccccccCCCCCCCCCCCCCCCCCCC-hhHHHHHHHh-
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGV----KQFLFISSAGIYKPADEPPHVEGDVVKPDAG-HVQVEKYISE-   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v----~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~-~y~~ek~~~e-   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+.    .+||++||...+.....            .. .|+.+|...+ 
T Consensus       126 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~------------~~~~Y~asK~a~~~  191 (276)
T 2b4q_A          126 VSGWEKVMQLN--VTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE------------QAYAYGPSKAALHQ  191 (276)
T ss_dssp             SHHHHHHHHHH--THHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC------------SCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC------------CccccHHHHHHHHH
Confidence            34455566666  888877777664    3343    79999999876643211            12 5666664432 


Q ss_pred             -----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 -----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 -----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                                 .++.+.+++||.+..+.... ........+......+       ...+.+.+|+|++++.++..... .
T Consensus       192 ~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p-------~~r~~~p~dvA~~v~~l~s~~~~~~  263 (276)
T 2b4q_A          192 LSRMLAKELVGEHINVNVIAPGRFPSRMTRH-IANDPQALEADSASIP-------MGRWGRPEEMAALAISLAGTAGAYM  263 (276)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCCCSTTTHH-HHHCHHHHHHHHHTST-------TSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhcccCeEEEEEEeccCcCcchhh-cchhHHHHHHhhcCCC-------CCCcCCHHHHHHHHHHHhCccccCC
Confidence                       37999999999998764321 1110111111100011       12378999999999999976533 3


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++++.+|.
T Consensus       264 tG~~i~vdGG~  274 (276)
T 2b4q_A          264 TGNVIPIDGGF  274 (276)
T ss_dssp             CSCEEEESTTT
T ss_pred             CCCEEEeCCCc
Confidence            47899988774

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.00  E-value=8.9e-06  Score=64.97  Aligned_cols=124  Identities=12%  Similarity=0.084  Sum_probs=76.8

Q ss_pred             ccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++.++++|  +.++.++++++    ++.+..+||++||..+ +...            +....|+.+|...+       
T Consensus       122 ~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~~Y~asK~a~~~~~~~la  187 (267)
T 1vl8_A          122 EFRQVIEVN--LFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM------------PNISAYAASKGGVASLTKALA  187 (267)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS------------SSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC------------CCChhHHHHHHHHHHHHHHHH
Confidence            344555666  88888887776    3456779999999763 2110            12246776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                           .++.+.+++||.+..+...... .......+....+         ...+++.+|+|++++.++..... ..|+++
T Consensus       188 ~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~~~~~p~dvA~~v~~l~s~~~~~itG~~i  258 (267)
T 1vl8_A          188 KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP---------LGRTGVPEDLKGVAVFLASEEAKYVTGQII  258 (267)
T ss_dssp             HHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHcCccccCCcCCeE
Confidence                 3899999999999776422100 0112222222211         11367999999999999975433 347889


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      .+.+|.
T Consensus       259 ~vdGG~  264 (267)
T 1vl8_A          259 FVDGGW  264 (267)
T ss_dssp             EESTTG
T ss_pred             EECCCC
Confidence            888774

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.00  E-value=6.3e-06  Score=67.79  Aligned_cols=152  Identities=13%  Similarity=0.027  Sum_probs=81.2

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.|+.++++++    ++.+..++|++||...+....           +..+.|+++|...+       
T Consensus       109 ~~~~~~~~vN--~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~-----------~~~~~Y~asKaa~~~~~~~la  175 (324)
T 3u9l_A          109 EQFAELYDIN--VLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP-----------PYLAPYFAAKAAMDAIAVQYA  175 (324)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC-----------SSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC-----------CcchhHHHHHHHHHHHHHHHH
Confidence            3445556666  99999999988    555778999999987663211           11245777775433       


Q ss_pred             -----hCCceEEEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCC---C--CcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGS---G--MQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~---~--~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                           .|+.+++++||.|.++.....     ...........+.....+..   .  ....+..+.+|+|++++.+++.+
T Consensus       176 ~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~  255 (324)
T 3u9l_A          176 RELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTA  255 (324)
T ss_dssp             HHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSC
T ss_pred             HHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence                 389999999999976532110     00011111111000000000   0  00011258899999999999987


Q ss_pred             CcCCCCEEEecCCCccC-------HHHHHHHHHHHhCCC
Q 025270          140 EAASSNIFNLVSDRAVT-------LDGMAKLCAQAAGLP  171 (255)
Q Consensus       140 ~~~~~~~~~i~~~~~~s-------~~el~~~i~~~~g~~  171 (255)
                      .......+.++ +...+       ..++.+.+.+.+|..
T Consensus       256 ~~~~~~~~~~g-p~~~~~~~~~~~~~~~~~~~~~~~g~~  293 (324)
T 3u9l_A          256 SGKRPFRVHVD-PAEDGADVGFSVLDRLRAEMLHRVGLS  293 (324)
T ss_dssp             TTCCCSEEEEC-TTCCSHHHHHHHHHHHHHHHHHHTTCG
T ss_pred             CCCCCeEEEeC-CcchHHHHHHHHHHHHHHHHHHHcChH
Confidence            43222455555 33344       333444445556653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.00  E-value=9.2e-06  Score=65.28  Aligned_cols=130  Identities=8%  Similarity=0.024  Sum_probs=80.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+..++|++||...+...            +....|+.+|...+     
T Consensus       123 ~~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~  188 (277)
T 3gvc_A          123 TVEDFDRVIAIN--LRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV------------GGTGAYGMSKAGIIQLSRI  188 (277)
T ss_dssp             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC------------TTBHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------------CCchhHHHHHHHHHHHHHH
Confidence            344556666777  8888888887753    455689999997655321            12356777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCC------CCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~------~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                             .++.+..++||.|+++...         .......-.....      ......+.+.+|+|++++.++.....
T Consensus       189 la~e~~~~gI~vn~v~PG~v~t~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~  259 (277)
T 3gvc_A          189 TAAELRSSGIRSNTLLPAFVDTPMQQ---------TAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDAS  259 (277)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHH---------HHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHhcccCeEEEEEeeCCccCchHH---------HhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccC
Confidence                   3799999999999875211         1110000000000      00112467899999999999976543


Q ss_pred             -CCCCEEEecCCCccC
Q 025270          142 -ASSNIFNLVSDRAVT  156 (255)
Q Consensus       142 -~~~~~~~i~~~~~~s  156 (255)
                       ..|+++++.+|...+
T Consensus       260 ~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          260 MITGTTQIADGGTIAA  275 (277)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CccCcEEEECCcchhc
Confidence             357999999886543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.00  E-value=1.2e-05  Score=63.52  Aligned_cols=123  Identities=12%  Similarity=0.085  Sum_probs=80.4

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ++.++++|  +.++.++++++...  +..++|++||...+....            ....|+.+|...+           
T Consensus       115 ~~~~~~~N--~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~  180 (255)
T 3icc_A          115 FDRMVSVN--AKAPFFIIQQALSRLRDNSRIINISSAATRISLP------------DFIAYSMTKGAINTMTFTLAKQLG  180 (255)
T ss_dssp             HHHHHHHH--THHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHhhh--chHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC------------CcchhHHhHHHHHHHHHHHHHHHH
Confidence            44455566  99999999999865  345899999977654311            2256777775432           


Q ss_pred             -hCCceEEEecCcccCCCCCCCcHHH-HHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKDCEEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                       .++.+..++||.+..+......-.. +........+         ...+.+.+|+|+++..++..... ..|+++++.+
T Consensus       181 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          181 ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA---------FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence             2899999999999876543321111 1111111111         12367899999999998875433 4579999998


Q ss_pred             CC
Q 025270          152 DR  153 (255)
Q Consensus       152 ~~  153 (255)
                      |.
T Consensus       252 G~  253 (255)
T 3icc_A          252 GS  253 (255)
T ss_dssp             ST
T ss_pred             Ce
Confidence            75

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.99  E-value=5e-06  Score=66.39  Aligned_cols=127  Identities=7%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             cccceEEecccCcccHHHH----HHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~l----l~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++    +..+++.+..++|++||...+...            +....|+.+|...+       
T Consensus       115 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~la  180 (267)
T 1iy8_A          115 AEFDKVVSIN--LRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI------------GNQSGYAAAKHGVVGLTRNSA  180 (267)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC------------SSBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC------------CCCccHHHHHHHHHHHHHHHH
Confidence            3445556666  7665544    444555566799999997755321            12256776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCC-------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 -----NFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                           .++.+..++||.++++....       .........+....         ....+.+.+|+|++++.++..... 
T Consensus       181 ~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dvA~~v~~l~s~~~~~  251 (267)
T 1iy8_A          181 VEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN---------PSKRYGEAPEIAAVVAFLLSDDASY  251 (267)
T ss_dssp             HHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCccccC
Confidence                 38999999999998753110       00000000111111         112378999999999999875433 


Q ss_pred             CCCCEEEecCCCcc
Q 025270          142 ASSNIFNLVSDRAV  155 (255)
Q Consensus       142 ~~~~~~~i~~~~~~  155 (255)
                      ..|+++++.+|...
T Consensus       252 ~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          252 VNATVVPIDGGQSA  265 (267)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCCEEEECCCccc
Confidence            34789999888644

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.99  E-value=1.6e-06  Score=69.32  Aligned_cols=124  Identities=9%  Similarity=0.050  Sum_probs=75.5

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++.+++    ++.+..+||++||...+...            +....|+.+|...+       
T Consensus       123 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~la  188 (266)
T 3grp_A          123 QDWDDVLAVN--LTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN------------PGQTNYCAAKAGLIGFSKALA  188 (266)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC------------CCchhHHHHHHHHHHHHHHHH
Confidence            4455566667  88855555544    44566799999997654221            12256777775322       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..++||.|.++.... ........+....+         ...+.+.+|+|++++.++..... ..|++++
T Consensus       189 ~e~~~~gI~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~p---------~~r~~~~edvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3grp_A          189 QEIASRNITVNCIAPGFIKSAMTDK-LNEKQKEAIMAMIP---------MKRMGIGEEIAFATVYLASDEAAYLTGQTLH  258 (266)
T ss_dssp             HHHGGGTEEEEEEEECSBCSHHHHT-CCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhhhhCcEEEEEeeCcCCCchhhc-cCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence                 27999999999997753211 11222223333222         12367899999999999876543 3579999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       259 vdGG~  263 (266)
T 3grp_A          259 INGGM  263 (266)
T ss_dssp             ESTTC
T ss_pred             ECCCe
Confidence            98875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.98  E-value=9.3e-06  Score=65.47  Aligned_cols=134  Identities=11%  Similarity=0.076  Sum_probs=81.6

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      ...++.++++|  +.++.++++++    ++.+..++|++||...+....          .+....|+.+|...+      
T Consensus       127 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----------~~~~~~Y~asKaa~~~l~~~l  194 (283)
T 3v8b_A          127 PFEWDETIAVN--LRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT----------TPGATAYTATKAAQVAIVQQL  194 (283)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----------STTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC----------CCCchHHHHHHHHHHHHHHHH
Confidence            34456667777  99999998888    455667999999976543111          112356887776433      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcc--eeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF--TNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                            .++.+..++||.|..+.........   .................  ..+...+|+|++++.++..... ..|+
T Consensus       195 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~  271 (283)
T 3v8b_A          195 ALELGKHHIRVNAVCPGAIETNISDNTKLRH---EEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGS  271 (283)
T ss_dssp             HHHTTTTTEEEEEEEECSBSSCTTCCTTBCC---HHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHhCccCcEEEEEEeCCCcCCccccccccc---chhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCC
Confidence                  2789999999999877543321000   00000001111111111  2467899999999999875543 3578


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      ++++.+|.
T Consensus       272 ~i~vdGG~  279 (283)
T 3v8b_A          272 PVWIDGGQ  279 (283)
T ss_dssp             EEEESTTH
T ss_pred             EEEECcCc
Confidence            99988774

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.98  E-value=1.2e-05  Score=64.31  Aligned_cols=126  Identities=10%  Similarity=0.097  Sum_probs=80.3

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++..    .+..++|++||...+....            ....|+++|...+       
T Consensus       103 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la  168 (269)
T 3vtz_A          103 EIWRRIIDVN--VNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK------------NAAAYVTSKHALLGLTRSVA  168 (269)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC------------CChhHHHHHHHHHHHHHHHH
Confidence            3345556666  8888888887653    4567899999988765321            1256777775432       


Q ss_pred             --h--CCceEEEecCcccCCCCCCC----------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 --N--FSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 --~--~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                        .  ++.+..++||.|.++.....          ............         .....+.+.+|+|++++.++....
T Consensus       169 ~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~~  239 (269)
T 3vtz_A          169 IDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ---------HPMGRIGRPEEVAEVVAFLASDRS  239 (269)
T ss_dssp             HHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCCcc
Confidence              2  78899999999987531110          001111111111         112346789999999999998654


Q ss_pred             c-CCCCEEEecCCCc
Q 025270          141 A-ASSNIFNLVSDRA  154 (255)
Q Consensus       141 ~-~~~~~~~i~~~~~  154 (255)
                      . ..|+++++.+|..
T Consensus       240 ~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          240 SFITGACLTVDGGLL  254 (269)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCCcCcEEEECCCcc
Confidence            3 3579999998863

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.97  E-value=3.1e-06  Score=67.87  Aligned_cols=130  Identities=13%  Similarity=0.068  Sum_probs=81.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+..++|++||...+....            ....|+.+|...+     
T Consensus       123 ~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  188 (271)
T 4ibo_A          123 ETADWQRVIDTN--LTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA------------TVAPYTVAKGGIKMLTRA  188 (271)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC------------CchhHHHHHHHHHHHHHH
Confidence            334455666777  8888888777654    3556899999976543211            2256777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                             .++.+..++||.|..+...... .+.+...+....+         ...+...+|+|++++.++..... ..|+
T Consensus       189 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~v~~L~s~~~~~itG~  259 (271)
T 4ibo_A          189 MAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTP---------AKRWGKPQELVGTAVFLSASASDYVNGQ  259 (271)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHST---------TCSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence                   3799999999999876422110 0122222222221         12356889999999998875543 3579


Q ss_pred             EEEecCCCccC
Q 025270          146 IFNLVSDRAVT  156 (255)
Q Consensus       146 ~~~i~~~~~~s  156 (255)
                      ++++.+|...+
T Consensus       260 ~i~vdGG~~~~  270 (271)
T 4ibo_A          260 IIYVDGGMLSV  270 (271)
T ss_dssp             EEEESTTGGGB
T ss_pred             EEEECCCeecc
Confidence            99999886543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.96  E-value=6.9e-06  Score=65.73  Aligned_cols=124  Identities=8%  Similarity=0.049  Sum_probs=75.9

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+       
T Consensus       129 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la  194 (271)
T 4iin_A          129 EDFHHVIDNN--LTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM------------GQTNYSASKGGMIAMSKSFA  194 (271)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc--cHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC------------CchHhHHHHHHHHHHHHHHH
Confidence            3445555666  888777777664    34567899999976553211            2256777775433       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..++||.+..+..... .........         .......+.+.+|+|+++..++..... ..|++++
T Consensus       195 ~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~---------~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~  264 (271)
T 4iin_A          195 YEGALRNIRFNSVTPGFIETDMNANL-KDELKADYV---------KNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLK  264 (271)
T ss_dssp             HHHHTTTEEEEEEEECSBCCC-------------CG---------GGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHhCcEEEEEEeCcccCCchhhh-cHHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEE
Confidence                 378999999999977643221 011111101         111223478999999999999986543 3579999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       265 vdGG~  269 (271)
T 4iin_A          265 VNGGL  269 (271)
T ss_dssp             ESTTS
T ss_pred             eCCCe
Confidence            98875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.96  E-value=1e-05  Score=63.60  Aligned_cols=112  Identities=11%  Similarity=0.001  Sum_probs=65.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----------C-----cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----------G-----VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI   72 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----------~-----v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~   72 (255)
                      ++..+++|  +.++.++++++...          +     ..+||++||...+.....    +.. ..+....|+.+|..
T Consensus       106 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~-~~~~~~~Y~~sK~a  178 (250)
T 1yo6_A          106 IAEQLDVN--TTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT----SGS-AQFPVLAYRMSKAA  178 (250)
T ss_dssp             HHHHHHHH--THHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC----STT-SSSCBHHHHHHHHH
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc----ccc-ccCCccHHHHHHHH
Confidence            34445555  88888888887643          4     678999999876543211    011 11223567777764


Q ss_pred             Hh------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           73 SE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        73 ~e------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      .+            .++.+.++|||.|.++....                         ..+++.+|+|++++.++....
T Consensus       179 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~  233 (250)
T 1yo6_A          179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------NAALTVEQSTAELISSFNKLD  233 (250)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------------HHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------------CCCCCHHHHHHHHHHHHhccc
Confidence            32            27999999999887653210                         135789999999999998765


Q ss_pred             c-CCCCEEEecC
Q 025270          141 A-ASSNIFNLVS  151 (255)
Q Consensus       141 ~-~~~~~~~i~~  151 (255)
                      . ..|+.+.+.+
T Consensus       234 ~~~~G~~~~~~g  245 (250)
T 1yo6_A          234 NSHNGRFFMRNL  245 (250)
T ss_dssp             GGGTTCEEETTE
T ss_pred             ccCCCeEEEECC
Confidence            4 3445555443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.96  E-value=1.9e-05  Score=63.91  Aligned_cols=128  Identities=10%  Similarity=0.019  Sum_probs=81.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++.++++|  +.++.++++++...  .-.++|++||...+....            ....|+++|...+        
T Consensus       134 ~~~~~~~~~~N--~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~  199 (293)
T 3grk_A          134 EANFTNTMLIS--VYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP------------NYNVMGVAKAALEASVKYLAV  199 (293)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT------------TTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC------------chHHHHHHHHHHHHHHHHHHH
Confidence            34455566667  99999999998763  235899999977654211            2256777775432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+..++||.|..+..... .............++         ..+...+|+|++++.++..... ..|++++
T Consensus       200 e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~  270 (293)
T 3grk_A          200 DLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVGDVGLYFLSDLSRSVTGEVHH  270 (293)
T ss_dssp             HHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCccccCCcceEEE
Confidence                279999999999988643321 112222222222211         1256789999999999986433 4579999


Q ss_pred             ecCCCcc
Q 025270          149 LVSDRAV  155 (255)
Q Consensus       149 i~~~~~~  155 (255)
                      +.+|..+
T Consensus       271 vdGG~~~  277 (293)
T 3grk_A          271 ADSGYHV  277 (293)
T ss_dssp             ESTTGGG
T ss_pred             ECCCccc
Confidence            9988643

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.94  E-value=2.8e-05  Score=62.54  Aligned_cols=127  Identities=13%  Similarity=0.027  Sum_probs=80.2

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++.++++|  +.++.++++++...  +..++|++||...+....           +....|+.+|...+        
T Consensus       128 ~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~  194 (283)
T 1g0o_A          128 PEEFDRVFTIN--TRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-----------PKHAVYSGSKGAIETFARCMAI  194 (283)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-----------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC-----------CCCcchHHHHHHHHHHHHHHHH
Confidence            34455566667  99999999999875  557999999976543211           01246777665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC----------cHHHHHHHHHc--CCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD----------CEEWFFDRIVR--KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~--~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                          .++.+.+++||.|.++.....          ........+..  ..         ....+.+.+|+|++++.++..
T Consensus       195 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~l~s~  265 (283)
T 1g0o_A          195 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS---------PLRRVGLPIDIARVVCFLASN  265 (283)
T ss_dssp             HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC---------TTCSCBCHHHHHHHHHHHHSG
T ss_pred             HhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC---------CCCCCcCHHHHHHHHHHHhCc
Confidence                389999999999987521100          00111111111  11         112367999999999999985


Q ss_pred             CCc-CCCCEEEecCCC
Q 025270          139 PEA-ASSNIFNLVSDR  153 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~  153 (255)
                      ... ..|+++++.+|.
T Consensus       266 ~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          266 DGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             cccCcCCCEEEeCCCc
Confidence            533 347899988774

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.94  E-value=1.2e-05  Score=63.83  Aligned_cols=130  Identities=12%  Similarity=0.095  Sum_probs=80.9

Q ss_pred             cCccccceEEecccCcccHHHHHHHHhhC------------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHH
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAKSS------------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK   70 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~~~------------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek   70 (255)
                      .+.+.++.++++|  +.++.++++++...            +-.++|++||...+....            ....|+.+|
T Consensus       102 ~~~~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK  167 (257)
T 3tl3_A          102 FSLAAFRKIVDIN--LVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI------------GQAAYSASK  167 (257)
T ss_dssp             CSHHHHHHHHHHH--HHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH------------HHHHHHHHH
T ss_pred             CCHHHHHHHHHHc--cHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC------------CCccHHHHH
Confidence            3445566777777  99988888887742            335899999976553211            124577776


Q ss_pred             HHHh------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           71 YISE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        71 ~~~e------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                      ...+            .++.+..++||.|..+.... ........+....+  ..      ..+.+.+|+|++++.++..
T Consensus       168 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~--~~------~r~~~p~dva~~v~~l~s~  238 (257)
T 3tl3_A          168 GGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLGKQVP--HP------SRLGNPDEYGALAVHIIEN  238 (257)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHHHTSS--SS------CSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHHhcCC--CC------CCccCHHHHHHHHHHHhcC
Confidence            5332            37999999999998765432 11222222222221  11      2367899999999999986


Q ss_pred             CCcCCCCEEEecCCCccC
Q 025270          139 PEAASSNIFNLVSDRAVT  156 (255)
Q Consensus       139 ~~~~~~~~~~i~~~~~~s  156 (255)
                      + ...|+++++.+|..++
T Consensus       239 ~-~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          239 P-MLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             T-TCCSCEEEESTTC---
T ss_pred             C-CCCCCEEEECCCccCC
Confidence            3 3447999999886544

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.93  E-value=5.8e-06  Score=65.11  Aligned_cols=112  Identities=11%  Similarity=0.077  Sum_probs=61.8

Q ss_pred             cceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.++++++.    +.+ .++|++||...+....            ....|+.+|...+         
T Consensus        99 ~~~~~~~N--~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la~e  163 (245)
T 3e9n_A           99 WHAHLDLN--VIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHP------------GNTIYAASKHALRGLADAFRKE  163 (245)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEEC----------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCC------------CchHHHHHHHHHHHHHHHHHHH
Confidence            34445555  778777666664    334 5899999987664321            1256777775433         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                         .++.+..++||.+.++.....     ....  +       .......+++.+|+|++++.+++.+..  +.++|+.
T Consensus       164 ~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~--~-------~~~~~~~~~~p~dvA~~i~~l~~~~~~--~~~~~i~  226 (245)
T 3e9n_A          164 EANNGIRVSTVSPGPTNTPMLQGL-----MDSQ--G-------TNFRPEIYIEPKEIANAIRFVIDAGET--TQITNVD  226 (245)
T ss_dssp             HGGGTCEEEEEEECCC------------------------------CCGGGSCHHHHHHHHHHHHTSCTT--EEEEEEE
T ss_pred             hhhcCeEEEEEecCCccCchhhhh-----hhhh--h-------cccccccCCCHHHHHHHHHHHHcCCCc--cceeeeE
Confidence               379999999999987643221     0000  0       011123478999999999999998765  4677765

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.93  E-value=1.2e-06  Score=70.46  Aligned_cols=130  Identities=9%  Similarity=0.046  Sum_probs=82.1

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+..+||++||...+....            ....|+.+|...+     
T Consensus       125 ~~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  190 (277)
T 4fc7_A          125 SFNAFKTVMDID--TSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA------------LQVHAGSAKAAVDAMTRH  190 (277)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC------------CcHHHHHHHHHHHHHHHH
Confidence            334456666777  9999999888742    3346899999977553211            1256776665432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                             .++.+..++||.|.++.....  .............+         ...+...+|+|++++.++..... ..|
T Consensus       191 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~fL~s~~~~~itG  261 (277)
T 4fc7_A          191 LAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP---------LQRLGNKTEIAHSVLYLASPLASYVTG  261 (277)
T ss_dssp             HHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCCccCCcCC
Confidence                   279999999999987631100  01122222222221         12367899999999999985433 457


Q ss_pred             CEEEecCCCccC
Q 025270          145 NIFNLVSDRAVT  156 (255)
Q Consensus       145 ~~~~i~~~~~~s  156 (255)
                      +++++.+|..++
T Consensus       262 ~~i~vdGG~~~~  273 (277)
T 4fc7_A          262 AVLVADGGAWLT  273 (277)
T ss_dssp             CEEEESTTHHHH
T ss_pred             CEEEECCCcccC
Confidence            999999886443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.93  E-value=1e-05  Score=66.35  Aligned_cols=134  Identities=10%  Similarity=0.035  Sum_probs=81.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+ -.+||++||...+....            ....|+.+|...+    
T Consensus       155 ~~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~  220 (317)
T 3oec_A          155 TDQQWSDILQTN--LIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP------------GQSHYAASKHGVQGLML  220 (317)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT------------TBHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC------------CCcchHHHHHHHHHHHH
Confidence            344556667777  8898888888743    22 35799999977653211            2356777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcC---CC----eecc-CCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRK---RP----VPIP-GSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~---~~----~~i~-~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                              .++.+..++||.|.++.....   .+...+...   ..    .... .....+..+++.+|+|+++..++..
T Consensus       221 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~  297 (317)
T 3oec_A          221 SLANEVGRHNIRVNSVNPGAVNTEMALNE---KLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASD  297 (317)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBSSHHHHCH---HHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHhhcCeEEEEEecCcccCccccch---hhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCC
Confidence                    289999999999987632110   001111000   00    0000 0111124678999999999999875


Q ss_pred             CCc-CCCCEEEecCCCc
Q 025270          139 PEA-ASSNIFNLVSDRA  154 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~~  154 (255)
                      ... ..|+++++.+|..
T Consensus       298 ~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          298 EARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             GGTTCCSCEEEESTTGG
T ss_pred             cccCCCCCEEEECcchh
Confidence            543 3579999998864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.93  E-value=2.1e-05  Score=62.61  Aligned_cols=124  Identities=9%  Similarity=-0.014  Sum_probs=80.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ++..+++|  +.++.++++++...-  -.++|++||...+...            +....|+.+|...+           
T Consensus       115 ~~~~~~~n--~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~la~e~~  180 (266)
T 3oig_A          115 FLLAHNIS--SYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM------------PNYNVMGVAKASLDASVKYLAADLG  180 (266)
T ss_dssp             HHHHHHHH--THHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC------------TTTHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHh--HHHHHHHHHHHHhhcCCCceEEEEecccccccC------------CCcchhHHHHHHHHHHHHHHHHHHh
Confidence            34445555  899999999988652  2489999997765321            12256777775432           


Q ss_pred             -hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           75 -NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        75 -~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                       .++.+..++||.|..+..... ....+...+....+.         ..+.+.+|+|++++.++..... ..|+++++.+
T Consensus       181 ~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          181 KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence             279999999999987643322 112233333322211         1257899999999999986543 4578999998


Q ss_pred             CCc
Q 025270          152 DRA  154 (255)
Q Consensus       152 ~~~  154 (255)
                      |..
T Consensus       252 G~~  254 (266)
T 3oig_A          252 GFH  254 (266)
T ss_dssp             TGG
T ss_pred             CeE
Confidence            864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.93  E-value=2.1e-05  Score=63.06  Aligned_cols=125  Identities=8%  Similarity=-0.007  Sum_probs=80.0

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++.++++|  +.++.++++++...  +-.+||++||...+...            +....|+.+|...+         
T Consensus       110 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~la~e  175 (275)
T 2pd4_A          110 SAFNTAMEIS--VYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM------------AHYNVMGLAKAALESAVRYLAVD  175 (275)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHhccCCEEEEEecchhcCCC------------CCchhhHHHHHHHHHHHHHHHHH
Confidence            3445566666  99999999999875  12589999997654321            11245777765432         


Q ss_pred             ---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                         .++.+..++||.|.++..... ....+...+....++         ..+.+.+|+|++++.++..... ..|+++++
T Consensus       176 ~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva~~~~~l~s~~~~~~tG~~~~v  246 (275)
T 2pd4_A          176 LGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFV  246 (275)
T ss_dssp             HHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             hhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence               289999999999988753321 112222222222111         1256889999999999975432 34688988


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       247 dgg~  250 (275)
T 2pd4_A          247 DAGY  250 (275)
T ss_dssp             STTG
T ss_pred             CCCc
Confidence            8775

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.93  E-value=9e-06  Score=65.36  Aligned_cols=125  Identities=11%  Similarity=0.067  Sum_probs=80.4

Q ss_pred             cceEEecccCcccHHHHHHHHhh----------CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----------SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----------~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      ++..++.|  +.++.++++++..          .+-.+||++||...+....            ....|+.+|...+   
T Consensus       133 ~~~~~~~n--~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~  198 (281)
T 3ppi_A          133 FTKTIDLY--LNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI------------GQTAYAAAKAGVIGLT  198 (281)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC------------CCcccHHHHHHHHHHH
Confidence            44555556  8888888887763          2335899999987664321            2256777776432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                               .++.+..++||.|..+.... ........+....+.  .      ..+++.+|+|++++.++... ...|+
T Consensus       199 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~--~------~~~~~pedvA~~v~~l~s~~-~~tG~  268 (281)
T 3ppi_A          199 IAAARDLSSAGIRVNTIAPGTMKTPIMES-VGEEALAKFAANIPF--P------KRLGTPDEFADAAAFLLTNG-YINGE  268 (281)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHT-TCHHHHHHHHHTCCS--S------SSCBCHHHHHHHHHHHHHCS-SCCSC
T ss_pred             HHHHHHHhhcCeEEEEEecCcCCchhhhc-ccHHHHHHHHhcCCC--C------CCCCCHHHHHHHHHHHHcCC-CcCCc
Confidence                     27999999999986642211 112223333333221  1      23789999999999999864 34479


Q ss_pred             EEEecCCCccC
Q 025270          146 IFNLVSDRAVT  156 (255)
Q Consensus       146 ~~~i~~~~~~s  156 (255)
                      ++++.+|..++
T Consensus       269 ~i~vdGG~~~~  279 (281)
T 3ppi_A          269 VMRLDGAQRFT  279 (281)
T ss_dssp             EEEESTTCCCC
T ss_pred             EEEECCCcccC
Confidence            99999887554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.91  E-value=5.7e-06  Score=66.54  Aligned_cols=125  Identities=10%  Similarity=0.016  Sum_probs=78.8

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.++++++...    + .++|++||...+....           +....|+.+|...+        
T Consensus       113 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~  178 (280)
T 1xkq_A          113 IYHKTLKLN--LQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ-----------PDFLYYAIAKAALDQYTRSTAI  178 (280)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC-----------CSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC-----------CcccHHHHHHHHHHHHHHHHHH
Confidence            345556666  88888888887642    4 6899999987664320           12246776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC--cH------HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC-C-
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD--CE------EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-  140 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~--~~------~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~-  140 (255)
                          .++.+..++||.|.++.....  ..      ..+...+...  .       ....+.+.+|+|++++.++... . 
T Consensus       179 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~~~~~pedvA~~v~~l~s~~~~~  249 (280)
T 1xkq_A          179 DLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC--I-------PIGAAGKPEHIANIILFLADRNLSF  249 (280)
T ss_dssp             HHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C-------TTSSCBCHHHHHHHHHHHHCHHHHT
T ss_pred             HhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC--C-------CCCCCCCHHHHHHHHHHhcCccccc
Confidence                389999999999988742211  00      0111111111  1       1124789999999999998754 2 


Q ss_pred             cCCCCEEEecCCCc
Q 025270          141 AASSNIFNLVSDRA  154 (255)
Q Consensus       141 ~~~~~~~~i~~~~~  154 (255)
                      ...|+++++.+|..
T Consensus       250 ~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          250 YILGQSIVADGGTS  263 (280)
T ss_dssp             TCCSCEEEESTTGG
T ss_pred             CccCCeEEECCCcc
Confidence            23478999988854

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.91  E-value=1.5e-05  Score=64.17  Aligned_cols=136  Identities=11%  Similarity=0.033  Sum_probs=82.5

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .+.++.++++|  +.++.++++++...    + -.++|++||...+....            ....|+.+|...+     
T Consensus       126 ~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~  191 (286)
T 3uve_A          126 EEDWTEMIDIN--LAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYP------------HTGHYVAAKHGVVGLMRA  191 (286)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCC------------CccHHHHHHHHHHHHHHH
Confidence            44556667777  89988888887642    2 35899999977653211            1256777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCe----e--ccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV----P--IPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~----~--i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                             .++.+..++||.|..+..........+.........    .  -... ..+..+.+.+|+|++++.++.....
T Consensus       192 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~p~dvA~~v~fL~s~~a~  270 (286)
T 3uve_A          192 FGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFH-TLPIPWVEPIDISNAVLFFASDEAR  270 (286)
T ss_dssp             HHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTC-SSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhh-ccCCCcCCHHHHHHHHHHHcCcccc
Confidence                   379999999999988754421100000000000000    0  0011 1114578999999999999975543


Q ss_pred             -CCCCEEEecCCCcc
Q 025270          142 -ASSNIFNLVSDRAV  155 (255)
Q Consensus       142 -~~~~~~~i~~~~~~  155 (255)
                       ..|+++++.+|..+
T Consensus       271 ~itG~~i~vdGG~~l  285 (286)
T 3uve_A          271 YITGVTLPIDAGSCL  285 (286)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCEEeECCcccc
Confidence             45799999988643

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.89  E-value=9.3e-06  Score=64.75  Aligned_cols=125  Identities=10%  Similarity=0.019  Sum_probs=76.8

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++..    .+..+||++||...+...            +....|+.+|...+       
T Consensus        96 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la  161 (264)
T 2dtx_A           96 GEWRRIIDVN--LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT------------KNASAYVTSKHAVIGLTKSIA  161 (264)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC------------CCchhHHHHHHHHHHHHHHHH
Confidence            3455566666  8887777777753    456799999998766431            12256777765432       


Q ss_pred             --hC--CceEEEecCcccCCCCCCCc------HH----HHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 --NF--SNWASFRPQYMIGSGNNKDC------EE----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 --~~--~~~~ilRp~~v~G~~~~~~~------~~----~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                        .+  +.+.+++||.+.++......      ..    .....+...         .....+++.+|+|++++.++....
T Consensus       162 ~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~p~dvA~~v~~l~s~~~  232 (264)
T 2dtx_A          162 LDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE---------HPMQRIGKPQEVASAVAFLASREA  232 (264)
T ss_dssp             HHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCchh
Confidence              22  88999999998664211000      00    011111111         111247899999999999997543


Q ss_pred             c-CCCCEEEecCCC
Q 025270          141 A-ASSNIFNLVSDR  153 (255)
Q Consensus       141 ~-~~~~~~~i~~~~  153 (255)
                      . ..|+++++.+|.
T Consensus       233 ~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          233 SFITGTCLYVDGGL  246 (264)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             cCCCCcEEEECCCc
Confidence            2 347899988875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.89  E-value=2.3e-05  Score=62.65  Aligned_cols=128  Identities=13%  Similarity=0.043  Sum_probs=80.1

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.+.++.++++|  +.++.++++++...-.  .++|++||.......           .+....|+.+|...+       
T Consensus       116 ~~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la  182 (270)
T 3is3_A          116 TEEEFDRVFSLN--TRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS-----------VPKHSLYSGSKGAVDSFVRIFS  182 (270)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-----------CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-----------CCCCchhHHHHHHHHHHHHHHH
Confidence            344556666777  9999999999886533  389999996522110           112356777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCC-----------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNK-----------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                           .++.+..++||.|..+....           ..............         ....+.+.+|+|++++.++..
T Consensus       183 ~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~L~s~  253 (270)
T 3is3_A          183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS---------PLHRNGWPQDVANVVGFLVSK  253 (270)
T ss_dssp             HHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS---------TTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCC
Confidence                 38999999999998764221           00111111111111         112367899999999999975


Q ss_pred             CCc-CCCCEEEecCCC
Q 025270          139 PEA-ASSNIFNLVSDR  153 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~  153 (255)
                      ... ..|+++++.+|.
T Consensus       254 ~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          254 EGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccCCccCcEEEeCCCC
Confidence            543 357899998874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.89  E-value=2.3e-05  Score=62.98  Aligned_cols=126  Identities=8%  Similarity=0.016  Sum_probs=82.1

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      ..++.++++|  +.++.++++++...   +..++|++||...+....            ....|+++|...+        
T Consensus       130 ~~~~~~~~~N--~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaal~~~~~~la~  195 (280)
T 3nrc_A          130 EGFSIAHDIS--AYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP------------SYNTMGVAKASLEATVRYTAL  195 (280)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT------------TTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC------------CchhhHHHHHHHHHHHHHHHH
Confidence            3445556666  88999999888753   346899999977653211            2256777775432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+..++||.|..+..... ....+........+.         ..+...+|+|++++.++..... ..|++++
T Consensus       196 e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~pedvA~~v~~l~s~~~~~~tG~~i~  266 (280)
T 3nrc_A          196 ALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIMEVGNTVAFLCSDMATGITGEVVH  266 (280)
T ss_dssp             HHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHHHHHHHHHTTSGGGTTCCSCEEE
T ss_pred             HHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCcccCCcCCcEEE
Confidence                379999999999988653322 112233333222211         1256889999999999985433 4579999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       267 vdgG~~  272 (280)
T 3nrc_A          267 VDAGYH  272 (280)
T ss_dssp             ESTTGG
T ss_pred             ECCCcc
Confidence            998864

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.87  E-value=4.4e-06  Score=68.01  Aligned_cols=121  Identities=12%  Similarity=0.001  Sum_probs=66.6

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.++.++++|  +.++.++++++..    .+ ..++|++||...+...            +....|+.+|...+      
T Consensus       130 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~l  195 (301)
T 3tjr_A          130 DDWRWVIDID--LWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN------------AGLGTYGVAKYGVVGLAETL  195 (301)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhh--hHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC------------CCchHHHHHHHHHHHHHHHH
Confidence            3445556666  8898888888743    23 4689999997765321            12356777776432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                            .|+.+..++||.|..+..................+...++.......+++++|+|++++.+++++.
T Consensus       196 a~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          196 AREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             HHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred             HHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence                  279999999998866421110000000000011111222223334568999999999999998764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.86  E-value=1.3e-05  Score=63.61  Aligned_cols=129  Identities=6%  Similarity=-0.035  Sum_probs=74.9

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .++.+++.|  +.++.++++++..    .+ ..++|++||...+...            +....|+.+|...+       
T Consensus       102 ~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~la  167 (256)
T 1geg_A          102 IVDKVYNIN--VKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------PELAVYSSSKFAVRGLTQTAA  167 (256)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC------------CCchhHHHHHHHHHHHHHHHH
Confidence            344555666  7777777766654    34 5789999997654321            11245776665322       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHc-----CCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-----KRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-----~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                           .++.+..++||.|.++...     .+......     ... ............+.+.+|+|+++..++..... .
T Consensus       168 ~e~~~~gi~v~~v~PG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~  242 (256)
T 1geg_A          168 RDLAPLGITVNGYCPGIVKTPMWA-----EIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYM  242 (256)
T ss_dssp             HHHGGGTEEEEEEEECSBSSHHHH-----HHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHcCeEEEEEEECCCccchhh-----hhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence                 3799999999999875311     11000000     000 00000001112378999999999999975533 3


Q ss_pred             CCCEEEecCCCc
Q 025270          143 SSNIFNLVSDRA  154 (255)
Q Consensus       143 ~~~~~~i~~~~~  154 (255)
                      .|+++++.+|..
T Consensus       243 tG~~i~vdGG~~  254 (256)
T 1geg_A          243 TGQSLLIDGGMV  254 (256)
T ss_dssp             CSCEEEESSSSS
T ss_pred             CCCEEEeCCCcc
Confidence            478999888753

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.86  E-value=7.5e-06  Score=65.34  Aligned_cols=128  Identities=13%  Similarity=0.073  Sum_probs=80.7

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .+.++.++++|  +.++.++++++...    + -.++|++||...+....            ....|+.+|...+     
T Consensus       119 ~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~  184 (266)
T 4egf_A          119 PQLFDATIAVN--LRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP------------DHYAYCTSKAGLVMATKV  184 (266)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC------------CChHHHHHHHHHHHHHHH
Confidence            34455566667  88888888887542    2 35899999987663211            1256777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                             .++.+..++||.|..+..... ........+....+         ...+...+|+|++++.++..... ..|+
T Consensus       185 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~~~~~itG~  255 (266)
T 4egf_A          185 LARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP---------LGRFAVPHEVSDAVVWLASDAASMINGV  255 (266)
T ss_dssp             HHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCchhcCccCc
Confidence                   279999999999976531110 00112222222211         12367899999999999976543 4579


Q ss_pred             EEEecCCCcc
Q 025270          146 IFNLVSDRAV  155 (255)
Q Consensus       146 ~~~i~~~~~~  155 (255)
                      ++++.+|..+
T Consensus       256 ~i~vdGG~~~  265 (266)
T 4egf_A          256 DIPVDGGYTM  265 (266)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCccC
Confidence            9999988643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.86  E-value=8.2e-06  Score=64.67  Aligned_cols=127  Identities=10%  Similarity=0.067  Sum_probs=76.9

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.+++.|  +.++.++++++..    .+..+||++||...+...            +....|+.+|...+     
T Consensus       107 ~~~~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~  172 (253)
T 2nm0_A          107 SEEDFTSVVETN--LTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS------------AGQANYAASKAGLVGFARS  172 (253)
T ss_dssp             CTTTTHHHHHHH--HHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH------------HHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------------CCcHHHHHHHHHHHHHHHH
Confidence            344566666777  8888888877653    366799999997654211            11245666665322     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+.+++||.|..+.... ........+....         ....+++.+|+|++++.++..... ..|++
T Consensus       173 la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~---------p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~  242 (253)
T 2nm0_A          173 LARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANIVSQV---------PLGRYARPEEIAATVRFLASDDASYITGAV  242 (253)
T ss_dssp             HHHHHCSSSEEEEEEEECSBCC----------CHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCCcCcE
Confidence                   27899999999987654221 0000111111111         112378999999999999976543 34789


Q ss_pred             EEecCCCc
Q 025270          147 FNLVSDRA  154 (255)
Q Consensus       147 ~~i~~~~~  154 (255)
                      +.+.+|..
T Consensus       243 i~vdGG~~  250 (253)
T 2nm0_A          243 IPVDGGLG  250 (253)
T ss_dssp             EEESTTTT
T ss_pred             EEECCccc
Confidence            99888754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.84  E-value=5.3e-05  Score=62.38  Aligned_cols=123  Identities=9%  Similarity=-0.012  Sum_probs=80.0

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCC------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      .++.++++|  +.++.++++++.    +.+      ..+||++||...+...            +....|+.+|...+  
T Consensus       179 ~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~------------~~~~~Y~asKaal~~l  244 (328)
T 2qhx_A          179 ATADLFGSN--AIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------LGYTIYTMAKGALEGL  244 (328)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC------------CCcHHHHHHHHHHHHH
Confidence            345556666  888888888776    334      5789999997755321            12256777765432  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                                .++.+..++||.|..+. .. . +.....+....+  +   +   ..+...+|+|++++.++..... ..
T Consensus       245 ~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~-~~~~~~~~~~~p--~---~---~r~~~pedvA~~v~~l~s~~~~~it  313 (328)
T 2qhx_A          245 TRSAALELAPLQIRVNGVGPGLSVLVD-DM-P-PAVWEGHRSKVP--L---Y---QRDSSAAEVSDVVIFLCSSKAKYIT  313 (328)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBSCCC-CS-C-HHHHHHHHTTCT--T---T---TSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHhhcCcEEEEEecCcccCCc-cc-c-HHHHHHHHhhCC--C---C---CCCCCHHHHHHHHHHHhCccccCcc
Confidence                      27999999999998876 22 1 233333332221  1   0   0257899999999999975432 34


Q ss_pred             CCEEEecCCCc
Q 025270          144 SNIFNLVSDRA  154 (255)
Q Consensus       144 ~~~~~i~~~~~  154 (255)
                      |+++++.+|..
T Consensus       314 G~~i~vdGG~~  324 (328)
T 2qhx_A          314 GTCVKVDGGYS  324 (328)
T ss_dssp             SCEEEESTTGG
T ss_pred             CcEEEECCCcc
Confidence            78999988754

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.82  E-value=4.8e-05  Score=59.77  Aligned_cols=125  Identities=12%  Similarity=0.115  Sum_probs=77.7

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+       
T Consensus        97 ~~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la  162 (244)
T 1zmo_A           97 ADIRQMFEAL--SIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA------------YNPLYGPARAATVALVESAA  162 (244)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT------------TCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC------------CchHHHHHHHHHHHHHHHHH
Confidence            3455566667  888888888775    45567999999987664311            1245776665432       


Q ss_pred             -----hCCceEEEecCcccCCCC---CCCcHHHHHHHHHc-CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 -----NFSNWASFRPQYMIGSGN---NKDCEEWFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~---~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                           .++.+..++||.|-.+..   ....-......+.. ..  ++       ..+...+|+|++++.++..... ..|
T Consensus       163 ~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~pe~vA~~v~~l~s~~~~~~tG  233 (244)
T 1zmo_A          163 KTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDV--PL-------GRLGRPDEMGALITFLASRRAAPIVG  233 (244)
T ss_dssp             HHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHC--TT-------CSCBCHHHHHHHHHHHHTTTTGGGTT
T ss_pred             HHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCC--CC-------CCCcCHHHHHHHHHHHcCccccCccC
Confidence                 279999999998876542   11000011111111 11  11       1267899999999999986543 356


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +.+.+.+|.
T Consensus       234 ~~i~vdgG~  242 (244)
T 1zmo_A          234 QFFAFTGGY  242 (244)
T ss_dssp             CEEEESTTC
T ss_pred             CEEEeCCCC
Confidence            888887764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.82  E-value=5.7e-06  Score=65.95  Aligned_cols=129  Identities=12%  Similarity=0.104  Sum_probs=78.3

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH----H---hhCC
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI----S---ENFS   77 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~----~---e~~~   77 (255)
                      .++.+++.|  +.++.++++++...-  ..+||++||...++....        ..+..+|.+.+.+.    .   ..++
T Consensus       103 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------~~Y~asK~a~~~~~~~la~e~~~~gi  172 (263)
T 2a4k_A          103 AWEKVLRVN--LTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL--------AHYAAGKLGVVGLARTLALELARKGV  172 (263)
T ss_dssp             HHHHHHHHH--HHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH--------HHHHHCSSHHHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHhcCCEEEEEecchhcCCCCc--------HHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence            345555666  899999999887542  358999999877621100        00112333322222    2   2389


Q ss_pred             ceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCcc
Q 025270           78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRAV  155 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~~  155 (255)
                      .+.+++||.|.++..... .......+....+  +       ..+.+.+|+|++++.++..... ..|+++++.+|..+
T Consensus       173 ~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~p--~-------~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          173 RVNVLLPGLIQTPMTAGL-PPWAWEQEVGASP--L-------GRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             EEEEEEECSBCCGGGTTS-CHHHHHHHHHTST--T-------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             EEEEEEeCcCcCchhhhc-CHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence            999999999988753321 1222222222211  1       1367999999999999975433 34789999888643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.82  E-value=4.5e-05  Score=60.27  Aligned_cols=122  Identities=10%  Similarity=0.078  Sum_probs=76.1

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++    ++.+..++|++||...+....            ....|+.+|...+       
T Consensus       115 ~~~~~~~~~N--~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~l~~~la  180 (252)
T 3f1l_A          115 QVWQDVMQVN--VNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA------------NWGAYAASKFATEGMMQVLA  180 (252)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhh--hHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC------------CCchhHHHHHHHHHHHHHHH
Confidence            3455666777  88988888887    455667999999977553211            2256777775433       


Q ss_pred             --h--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 --N--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 --~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                        +  .+.+..+.||.|-.+         +........         ....+...+|+|.+++.++..... ..|+.+++
T Consensus       181 ~e~~~~irvn~v~PG~v~t~---------~~~~~~~~~---------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~v  242 (252)
T 3f1l_A          181 DEYQQRLRVNCINPGGTRTA---------MRASAFPTE---------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDA  242 (252)
T ss_dssp             HHTTTTCEEEEEECCSBSSH---------HHHHHCTTC---------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEES
T ss_pred             HHhcCCcEEEEEecCcccCc---------hhhhhCCcc---------chhccCCHHHHHHHHHHHcCccccCCCCCEEEe
Confidence              2  378888999877542         111211111         122367899999999999976543 45799999


Q ss_pred             cCCCccCHHH
Q 025270          150 VSDRAVTLDG  159 (255)
Q Consensus       150 ~~~~~~s~~e  159 (255)
                      .+|...++.|
T Consensus       243 dgG~~~~~~q  252 (252)
T 3f1l_A          243 QPGRKPGISQ  252 (252)
T ss_dssp             SCC-------
T ss_pred             CCCcCCCCCC
Confidence            9998766543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.81  E-value=6e-05  Score=60.27  Aligned_cols=125  Identities=11%  Similarity=0.013  Sum_probs=80.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .+.++.++++|  +.++.++++++...  +..++|++||.......           .+....|+.+|...+        
T Consensus       130 ~~~~~~~~~vN--~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~  196 (271)
T 3v2g_A          130 VADFDEVMAVN--FRAPFVAIRSASRHLGDGGRIITIGSNLAELVP-----------WPGISLYSASKAALAGLTKGLAR  196 (271)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC-----------STTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC-----------CCCchHHHHHHHHHHHHHHHHHH
Confidence            34456666677  99999999998764  34589999985432110           112356887776432        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEe
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNL  149 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i  149 (255)
                          .++.+..++||.|..+......  ..........+         ...+...+|+|++++.++..... ..|+++++
T Consensus       197 e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~---------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~v  265 (271)
T 3v2g_A          197 DLGPRGITVNIVHPGSTDTDMNPADG--DHAEAQRERIA---------TGSYGEPQDIAGLVAWLAGPQGKFVTGASLTI  265 (271)
T ss_dssp             HHGGGTCEEEEEEECSBCSSSSCSSC--SSHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HhhhhCeEEEEEecCCCcCCcccccc--hhHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEe
Confidence                2899999999999887543211  11122222211         11256899999999999875433 45789999


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .+|.
T Consensus       266 dGG~  269 (271)
T 3v2g_A          266 DGGA  269 (271)
T ss_dssp             STTT
T ss_pred             CcCc
Confidence            8874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.81  E-value=1.5e-06  Score=69.48  Aligned_cols=135  Identities=10%  Similarity=0.068  Sum_probs=76.6

Q ss_pred             cceEEecccCcc----cHHHHHHHHhhCC---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH-----H--
Q 025270            8 FKALFRTNNNFR----LQRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI-----S--   73 (255)
Q Consensus         8 ~d~~~~~~~n~~----~~~~ll~aa~~~~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~-----~--   73 (255)
                      ++..++.|  +.    .++.++..+++.+   ..++|++||...+....            ....|+.+|..     +  
T Consensus       102 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~~  167 (267)
T 2gdz_A          102 WEKTLQIN--LVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------------QQPVYCASKHGIVGFTRSA  167 (267)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhHH--HHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC------------CCchHHHHHHHHHHHHHHH
Confidence            34444445  55    4556666666543   57899999987765321            12346655532     1  


Q ss_pred             -------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCE
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  146 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  146 (255)
                             ..++.+.+++||.+.++................-.. .+ ........+++.+|+|++++.++.... ..|++
T Consensus       168 ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~dvA~~v~~l~s~~~-~~G~~  244 (267)
T 2gdz_A          168 ALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKD-HI-KDMIKYYGILDPPLIANGLITLIEDDA-LNGAI  244 (267)
T ss_dssp             HHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHH-HH-HHHHHHHCCBCHHHHHHHHHHHHHCTT-CSSCE
T ss_pred             HHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHH-HH-HHHhccccCCCHHHHHHHHHHHhcCcC-CCCcE
Confidence                   237899999999997652111000000000000000 00 000112347899999999999998654 34799


Q ss_pred             EEecCCCccCHHH
Q 025270          147 FNLVSDRAVTLDG  159 (255)
Q Consensus       147 ~~i~~~~~~s~~e  159 (255)
                      +++.+++.+++.|
T Consensus       245 ~~v~gg~~~~~~~  257 (267)
T 2gdz_A          245 MKITTSKGIHFQD  257 (267)
T ss_dssp             EEEETTTEEEECC
T ss_pred             EEecCCCcccccC
Confidence            9999988766654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.80  E-value=3.8e-05  Score=62.00  Aligned_cols=125  Identities=9%  Similarity=0.050  Sum_probs=78.5

Q ss_pred             CccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++    ++.+..+||++||...+....            ....|+.+|...+     
T Consensus       136 ~~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  201 (287)
T 3rku_A          136 ATEDIQDVFDTN--VTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP------------TGSIYCASKFAVGAFTDS  201 (287)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCC------------CCchHHHHHHHHHHHHHH
Confidence            334456667777  89988888887    344567899999977553211            2256777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                             .++.+..++||.|..+.....  ............            ..++..+|+|++++.++..... ..|
T Consensus       202 la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------------~~p~~pedvA~~v~~l~s~~~~~i~g  269 (287)
T 3rku_A          202 LRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD------------TTPLMADDVADLIVYATSRKQNTVIA  269 (287)
T ss_dssp             HHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT------------SCCEEHHHHHHHHHHHHTSCTTEEEE
T ss_pred             HHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc------------cCCCCHHHHHHHHHHHhCCCCCeEec
Confidence                   379999999999976521000  000011111111            1134899999999999987754 235


Q ss_pred             CEEEecCCCc
Q 025270          145 NIFNLVSDRA  154 (255)
Q Consensus       145 ~~~~i~~~~~  154 (255)
                      +++.+.+++.
T Consensus       270 ~~i~v~~g~~  279 (287)
T 3rku_A          270 DTLIFPTNQA  279 (287)
T ss_dssp             EEEEEETTEE
T ss_pred             ceEEeeCCCC
Confidence            7888877653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.80  E-value=2.5e-05  Score=60.83  Aligned_cols=99  Identities=11%  Similarity=0.023  Sum_probs=58.4

Q ss_pred             cceEEecccCcccHH----HHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            8 FKALFRTNNNFRLQR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~----~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      ++..++.|  +.++.    .++..+++.+.++||++||...+...            +....|+.+|...+         
T Consensus       102 ~~~~~~~N--~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e  167 (234)
T 2ehd_A          102 WRLVLDTN--LTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF------------KGGAAYNASKFGLLGLAGAAMLD  167 (234)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC------------CCCchhhHHHHHHHHHHHHHHHH
Confidence            34444555  66665    55555666678899999998766421            12256777775322         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                         .++.++++|||.+..+....         . . ..          +.+++.+|+|++++.++..+..
T Consensus       168 ~~~~gi~v~~v~Pg~v~t~~~~~---------~-~-~~----------~~~~~~~dvA~~~~~l~~~~~~  216 (234)
T 2ehd_A          168 LREANVRVVNVLPGSVDTGFAGN---------T-P-GQ----------AWKLKPEDVAQAVLFALEMPGH  216 (234)
T ss_dssp             HGGGTEEEEEEECC-------------------------------------CCHHHHHHHHHHHHHSCCS
T ss_pred             HhhcCcEEEEEEeCCCcCCcccc---------c-c-cc----------cCCCCHHHHHHHHHHHhCCCcc
Confidence               37999999999886642211         0 0 00          1157999999999999987654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.80  E-value=1.1e-05  Score=63.79  Aligned_cols=119  Identities=10%  Similarity=-0.075  Sum_probs=74.1

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----C---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----G---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .++..+++|  +.++.++++++...    +   ..++|++||...+....            ....|+.+|...+     
T Consensus        99 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~  164 (254)
T 1sby_A           99 QIERTIAIN--FTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH------------QVPVYSASKAAVVSFTNS  164 (254)
T ss_dssp             CHHHHHHHH--THHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------------TSHHHHHHHHHHHHHHHH
T ss_pred             HHhhhheee--ehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC------------CchHHHHHHHHHHHHHHH
Confidence            344445555  88999998888642    1   35799999988764321            1245776665432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC--cH--HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD--CE--EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  143 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~--~~--~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  143 (255)
                             .++.+.+++||.|.++.....  ..  .........            ...+.+++|+|++++.+++....  
T Consensus       165 la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~i~~~~~~~~~--  230 (254)
T 1sby_A          165 LAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNFVKAIEANKN--  230 (254)
T ss_dssp             HHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHHHHHHHHCCT--
T ss_pred             HHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHHHHHHHHcCCC--
Confidence                   389999999999987531110  00  000111111            11345899999999999874433  


Q ss_pred             CCEEEecCCC
Q 025270          144 SNIFNLVSDR  153 (255)
Q Consensus       144 ~~~~~i~~~~  153 (255)
                      |++|++.+|.
T Consensus       231 G~~~~v~gG~  240 (254)
T 1sby_A          231 GAIWKLDLGT  240 (254)
T ss_dssp             TCEEEEETTE
T ss_pred             CCEEEEeCCc
Confidence            7899998873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.79  E-value=2.6e-05  Score=62.29  Aligned_cols=125  Identities=10%  Similarity=0.019  Sum_probs=76.2

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++.++++|  +.++.++++++...  .-.++|++||...+....            ....|+.+|...+         
T Consensus       127 ~~~~~~~~vN--~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~e  192 (267)
T 3u5t_A          127 AVFDRVIAVN--LKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------SYGIYAAAKAGVEAMTHVLSKE  192 (267)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC------------CchHHHHHHHHHHHHHHHHHHH
Confidence            3455566677  99999999888754  224899999977653211            1256777775433         


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.+..++||.|..+.............+....         ....+...+|+|++++.++..... ..|+++++.
T Consensus       193 ~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vd  263 (267)
T 3u5t_A          193 LRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLA---------PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN  263 (267)
T ss_dssp             TTTSCCEEEEEEECCBC-----------CHHHHHTSS---------TTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEES
T ss_pred             hhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence               2799999999999765432211111111222111         122467899999999999986544 357889888


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +|.
T Consensus       264 GG~  266 (267)
T 3u5t_A          264 GGI  266 (267)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            763

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.79  E-value=2.2e-05  Score=62.80  Aligned_cols=132  Identities=10%  Similarity=-0.012  Sum_probs=78.6

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC---CcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.+++.|  +.++.++++++...   +..++|++||... ++..             ....|+.+|...+        
T Consensus       106 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------~~~~Y~asKaa~~~~~~~la~  170 (270)
T 1yde_A          106 GFRQLLELN--LLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-------------QAVPYVATKGAVTAMTKALAL  170 (270)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-------------CCcccHHHHHHHHHHHHHHHH
Confidence            345566666  89999998888631   2368999999754 3321             1245776665432        


Q ss_pred             ----hCCceEEEecCcccCCCCCC-----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           75 ----NFSNWASFRPQYMIGSGNNK-----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                          .++.+.++|||.|+++....     ......+.......  ++       ..+...+|+|+++..++.......|+
T Consensus       171 e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~p~dva~~v~~L~s~~~~itG~  241 (270)
T 1yde_A          171 DESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ--PL-------GRMGQPAEVGAAAVFLASEANFCTGI  241 (270)
T ss_dssp             HHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS--TT-------SSCBCHHHHHHHHHHHHHHCTTCCSC
T ss_pred             HhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcC--CC-------CCCcCHHHHHHHHHHHcccCCCcCCC
Confidence                38999999999998863110     00000011111111  11       12578999999999988753334578


Q ss_pred             EEEecCCCccCHHHHHH
Q 025270          146 IFNLVSDRAVTLDGMAK  162 (255)
Q Consensus       146 ~~~i~~~~~~s~~el~~  162 (255)
                      .+++.+|..+.+.....
T Consensus       242 ~i~vdGG~~~~~~~~~~  258 (270)
T 1yde_A          242 ELLVTGGAELGYGCKAS  258 (270)
T ss_dssp             EEEESTTTTSCC-----
T ss_pred             EEEECCCeecccCcCcc
Confidence            99999987666544433

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.78  E-value=2.1e-05  Score=62.81  Aligned_cols=115  Identities=12%  Similarity=0.045  Sum_probs=72.2

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+      
T Consensus       108 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~l  173 (266)
T 3p19_A          108 ANEWQRMFDVN--VLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP------------DHAAYCGTKFAVHAISENV  173 (266)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC------------CCchHHHHHHHHHHHHHHH
Confidence            34455566677  888888666654    45667999999987664321            1256777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                            .++.+..++||.|..+................. ..+       ...+++.+|+|++++.++.++..
T Consensus       174 a~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          174 REEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             HHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHHHHcCCCC
Confidence                  389999999999988643321111111111100 001       12368999999999999998765

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.78  E-value=2.5e-05  Score=61.86  Aligned_cols=126  Identities=10%  Similarity=0.003  Sum_probs=78.5

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++    ++.+ .++|++||...+...            +....|+.+|...+      
T Consensus       100 ~~~~~~~~~~N--~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~l  164 (254)
T 3kzv_A          100 VNAWKKLYDIN--FFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF------------SSWGAYGSSKAALNHFAMTL  164 (254)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS------------CCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC------------CCcchHHHHHHHHHHHHHHH
Confidence            34455666777  89999988888    4445 689999997655321            12356777775433      


Q ss_pred             ----hCCceEEEecCcccCCCCCCC--------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-c
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-A  141 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~  141 (255)
                          .++.+..++||.|..+.....        ........+....         ....+.+.+|+|++++.++.... .
T Consensus       165 a~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~p~dva~~v~~L~s~~~~~  235 (254)
T 3kzv_A          165 ANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK---------ENNQLLDSSVPATVYAKLALHGIPD  235 (254)
T ss_dssp             HHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH---------TTC----CHHHHHHHHHHHHHCCCG
T ss_pred             HhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH---------hcCCcCCcccHHHHHHHHHhhcccC
Confidence                279999999999988753321        0112222222111         11236789999999999988663 3


Q ss_pred             -CCCCEEEecCCCc
Q 025270          142 -ASSNIFNLVSDRA  154 (255)
Q Consensus       142 -~~~~~~~i~~~~~  154 (255)
                       ..|+.+++.+++.
T Consensus       236 ~itG~~i~vdg~~~  249 (254)
T 3kzv_A          236 GVNGQYLSYNDPAL  249 (254)
T ss_dssp             GGTTCEEETTCGGG
T ss_pred             CCCccEEEecCccc
Confidence             4578998887653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.69  E-value=1.5e-05  Score=63.40  Aligned_cols=135  Identities=12%  Similarity=0.013  Sum_probs=76.7

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----h---h
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----E---N   75 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----e---~   75 (255)
                      .+.++.++++|  +.++.++++++...  +..++|++||...+......       ..+..+|.+.+.+.+    |   .
T Consensus       112 ~~~~~~~~~~N--~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~-------~~Y~asKaa~~~l~~~la~e~~~~  182 (262)
T 3ksu_A          112 EAEFDAMDTIN--NKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY-------STYAGNKAPVEHYTRAASKELMKQ  182 (262)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC-------CC-----CHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC-------chhHHHHHHHHHHHHHHHHHHHHc
Confidence            34455566667  99999999999875  34689999997765422111       112335554443332    2   2


Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCcc
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  155 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~  155 (255)
                      ++.+..++||.|..+..         ....................+...+|+|++++.++.......|+.+++.+|...
T Consensus       183 gi~vn~v~PG~v~T~~~---------~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          183 QISVNAIAPGPMDTSFF---------YGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             TCEEEEEEECCCCTHHH---------HTCC------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred             CcEEEEEeeCCCcCccc---------cccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccC
Confidence            79999999998854311         000000000011111112346788999999999998632245799999988754


Q ss_pred             CH
Q 025270          156 TL  157 (255)
Q Consensus       156 s~  157 (255)
                      ..
T Consensus       254 ~~  255 (262)
T 3ksu_A          254 RE  255 (262)
T ss_dssp             C-
T ss_pred             CC
Confidence            43

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.69  E-value=2.6e-05  Score=62.53  Aligned_cols=112  Identities=13%  Similarity=0.128  Sum_probs=67.1

Q ss_pred             cceEEecccCccc----HHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            8 FKALFRTNNNFRL----QRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~----~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      ++..++.|  +.+    ++.++..+++.++  .+||++||...+....          .+....|+.+|...        
T Consensus       135 ~~~~~~~N--~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~~Y~~sK~a~~~~~~~la  202 (279)
T 1xg5_A          135 WKDMFNVN--VLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP----------LSVTHFYSATKYAVTALTEGLR  202 (279)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS----------CGGGHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCC----------CCCCchhHHHHHHHHHHHHHHH
Confidence            34445555  666    7888888888775  7999999988764211          01124566666542        


Q ss_pred             ------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           74 ------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        74 ------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                            ..++++.+++||.|.++..         ............ .......+++.+|+|++++.++..+..
T Consensus       203 ~e~~~~~~~i~v~~v~Pg~v~t~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~dvA~~i~~l~~~~~~  266 (279)
T 1xg5_A          203 QELREAQTHIRATCISPGVVETQFA---------FKLHDKDPEKAA-ATYEQMKCLKPEDVAEAVIYVLSTPAH  266 (279)
T ss_dssp             HHHHHTTCCCEEEEEEESCBCSSHH---------HHHTTTCHHHHH-HHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHhhcCCCeEEEEEecCcccchhh---------hhhcccChhHHh-hhcccccCCCHHHHHHHHHHHhcCCcc
Confidence                  2378999999999876531         011110000000 000112368999999999999987654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.68  E-value=9e-05  Score=59.72  Aligned_cols=122  Identities=12%  Similarity=0.016  Sum_probs=78.3

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC----C------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS----G------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~----~------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      .++.++++|  +.++.++++++...    +      ..++|++||...+...            +....|+.+|...+  
T Consensus       139 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l  204 (288)
T 2x9g_A          139 QVAELIGTN--AIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC------------MAFSLYNMGKHALVGL  204 (288)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh--hHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCC------------CCCchHHHHHHHHHHH
Confidence            344556666  88888888877642    2      4589999997765421            12256777775322  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceee-eeHHHHHHHHHHHhcCCCc-C
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNI-AHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-i~v~D~a~~~~~~l~~~~~-~  142 (255)
                                .++.+..++||.|+++. .. . ......+....+  +       ..+ ...+|+|++++.++..... .
T Consensus       205 ~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~-~~~~~~~~~~~p--~-------~r~~~~pedvA~~v~~l~s~~~~~i  272 (288)
T 2x9g_A          205 TQSAALELAPYGIRVNGVAPGVSLLPV-AM-G-EEEKDKWRRKVP--L-------GRREASAEQIADAVIFLVSGSAQYI  272 (288)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSCSCCT-TS-C-HHHHHHHHHTCT--T-------TSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhhccCeEEEEEEeccccCcc-cc-C-hHHHHHHHhhCC--C-------CCCCCCHHHHHHHHHHHhCccccCc
Confidence                      27999999999999986 31 1 222223322211  1       113 6899999999999975433 3


Q ss_pred             CCCEEEecCCCc
Q 025270          143 SSNIFNLVSDRA  154 (255)
Q Consensus       143 ~~~~~~i~~~~~  154 (255)
                      .|+++++.+|..
T Consensus       273 tG~~i~vdGG~~  284 (288)
T 2x9g_A          273 TGSIIKVDGGLS  284 (288)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCEEEECcchh
Confidence            478898887753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.68  E-value=3.9e-05  Score=60.58  Aligned_cols=116  Identities=9%  Similarity=0.048  Sum_probs=77.2

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h-
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E-   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e-   74 (255)
                      .++..+++|  +.++.++++++...-  -.+||++||...+...            +....|+.+|...         + 
T Consensus       111 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~la~e~  176 (251)
T 3orf_A          111 SVKGMIDMN--LYSAFASAHIGAKLLNQGGLFVLTGASAALNRT------------SGMIAYGATKAATHHIIKDLASEN  176 (251)
T ss_dssp             HHHHHHHHH--HHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHhhccCCEEEEEechhhccCC------------CCCchhHHHHHHHHHHHHHHHHHh
Confidence            344455566  999999999987642  2489999998766321            1235677777543         2 


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC-CCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN-PEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~-~~~-~~~~~~~  148 (255)
                          .++.+..++||.|..+.         .......         .....+++.+|+|++++.++.. ... ..|++++
T Consensus       177 ~~~~~gi~v~~v~PG~v~t~~---------~~~~~~~---------~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~  238 (251)
T 3orf_A          177 GGLPAGSTSLGILPVTLDTPT---------NRKYMSD---------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVK  238 (251)
T ss_dssp             SSSCTTCEEEEEEESCBCCHH---------HHHHCTT---------SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEE
T ss_pred             cccCCCcEEEEEecCcCcCcc---------hhhhccc---------ccccccCCHHHHHHHHHHHhcCccccCCcceEEE
Confidence                36889999999886541         2222111         1234578899999999999987 322 3578999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+++.
T Consensus       239 v~~g~~  244 (251)
T 3orf_A          239 FETKSK  244 (251)
T ss_dssp             EEEETT
T ss_pred             EecCCc
Confidence            887654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.67  E-value=2.2e-05  Score=64.33  Aligned_cols=120  Identities=8%  Similarity=-0.054  Sum_probs=65.0

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCC----------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSG----------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~----------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---   73 (255)
                      .++.++++|  +.|+.++++++....          ..+||++||...+....            ....|..+|...   
T Consensus       110 ~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~------------~~~~Y~aSKaal~~~  175 (319)
T 3ioy_A          110 DWDWLLGVN--LHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG------------SPGIYNTTKFAVRGL  175 (319)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS------------SSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC------------CCHHHHHHHHHHHHH
Confidence            344556666  899999888877542          34699999987664321            125688777622   


Q ss_pred             ---------hhCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           74 ---------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        74 ---------e~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                               ..++.+++++||.|.++..... ..+..+........ ..+..-.......++.+|+|+.++.+++++.
T Consensus       176 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          176 SESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence                     1289999999999987643321 11111111110000 0000000111122799999999999999764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.63  E-value=0.00013  Score=57.44  Aligned_cols=123  Identities=13%  Similarity=0.033  Sum_probs=72.1

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++++++.    +.+..++|++||...+...            +....|+.+|...+       
T Consensus        97 ~~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~la  162 (248)
T 3asu_A           97 EDWETMIDTN--NKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY------------AGGNVYGATKAFVRQFSLNLR  162 (248)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC------------CCCchHHHHHHHHHHHHHHHH
Confidence            3445556666  888888887775    3456789999998765321            12256777775432       


Q ss_pred             -----hCCceEEEecCcccC-CCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIG-SGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                           .++.+..++||.|.| +.........  ....  .  ...    ....++..+|+|++++.++.......++.+.
T Consensus       163 ~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~--~~~~--~--~~~----~~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~  232 (248)
T 3asu_A          163 TDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD--DGKA--E--KTY----QNTVALTPEDVSEAVWWVSTLPAHVNINTLE  232 (248)
T ss_dssp             HHTTTSCCEEEEEEECSBCC--------------------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEE
T ss_pred             HHhhhcCcEEEEEeccccccCcchhhcccCc--hHHH--H--HHH----hccCCCCHHHHHHHHHHHhcCCccceeeEEE
Confidence                 279999999999985 4221100000  0000  0  000    0112468999999999999876555567777


Q ss_pred             ecCC
Q 025270          149 LVSD  152 (255)
Q Consensus       149 i~~~  152 (255)
                      +...
T Consensus       233 v~~~  236 (248)
T 3asu_A          233 MMPV  236 (248)
T ss_dssp             ECCT
T ss_pred             Eccc
Confidence            6544

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.63  E-value=0.00019  Score=58.05  Aligned_cols=126  Identities=5%  Similarity=-0.056  Sum_probs=80.2

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e   74 (255)
                      +.++.++++|  +.++.++++++...  .-.++|++||...+.....           ....|+.+|...         |
T Consensus       143 ~~~~~~~~vN--~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~-----------~~~~Y~asKaa~~~~~~~la~e  209 (297)
T 1d7o_A          143 KGYLAAISAS--SYSFVSLLSHFLPIMNPGGASISLTYIASERIIPG-----------YGGGMSSAKAALESDTRVLAFE  209 (297)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT-----------CTTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hhHHHHHHHHHHHHhccCceEEEEeccccccCCCC-----------cchHHHHHHHHHHHHHHHHHHH
Confidence            3455566667  99999999999764  1258999999765432111           002466665431         2


Q ss_pred             ----hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                          .++.+..++||.|.++..... ....+...+....++         ..+...+|+|++++.++..... ..|++++
T Consensus       210 ~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~  280 (297)
T 1d7o_A          210 AGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIY  280 (297)
T ss_dssp             HHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             hCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEE
Confidence                589999999999998764432 122232332222111         1246899999999999875432 3478999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       281 vdgG~  285 (297)
T 1d7o_A          281 VDNGL  285 (297)
T ss_dssp             ESTTG
T ss_pred             ECCCc
Confidence            98875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.63  E-value=0.00027  Score=56.10  Aligned_cols=128  Identities=9%  Similarity=0.012  Sum_probs=80.2

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-----   75 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~-----   75 (255)
                      .+.++.++++|  +.++.++++++    ++.+..++|++||...+.....          +....|+.+|...+.     
T Consensus       122 ~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~~~~Y~~sK~a~~~~~~~l  189 (267)
T 3gdg_A          122 VEAWNHVVQVD--LNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP----------QEQTSYNVAKAGCIHMARSL  189 (267)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS----------SCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc--chHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC----------CCCCcchHHHHHHHHHHHHH
Confidence            34455566666  88888888887    4445568999999765432110          123568877765432     


Q ss_pred             ------CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           76 ------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        76 ------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                            .+.+..+.||.+-.+.... ........+....         ....+.+.+|+|+++..++..... ..|++++
T Consensus       190 a~e~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~~~~~---------~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~  259 (267)
T 3gdg_A          190 ANEWRDFARVNSISPGYIDTGLSDF-VPKETQQLWHSMI---------PMGRDGLAKELKGAYVYFASDASTYTTGADLL  259 (267)
T ss_dssp             HHHTTTTCEEEEEEECCEECSCGGG-SCHHHHHHHHTTS---------TTSSCEETHHHHHHHHHHHSTTCTTCCSCEEE
T ss_pred             HHHhccCcEEEEEECCccccchhhh-CCHHHHHHHHhcC---------CCCCCcCHHHHHhHhheeecCccccccCCEEE
Confidence                  3688899999887653321 1122222222221         123467899999999999976543 4578999


Q ss_pred             ecCCCc
Q 025270          149 LVSDRA  154 (255)
Q Consensus       149 i~~~~~  154 (255)
                      +.+|..
T Consensus       260 vdgG~~  265 (267)
T 3gdg_A          260 IDGGYT  265 (267)
T ss_dssp             ESTTGG
T ss_pred             ECCcee
Confidence            988753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.61  E-value=2.1e-05  Score=61.97  Aligned_cols=126  Identities=8%  Similarity=0.054  Sum_probs=77.4

Q ss_pred             ccccceEEecccCcccHHHHHHH----HhhCC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADW----AKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~a----a~~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .+.++.+++.|  +.++.+++++    +++.+ ..++|++||...+....            ....|+.+|...+     
T Consensus       101 ~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~  166 (247)
T 3rwb_A          101 LDHWRKIIDVN--LTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP------------NMAAYVAAKGGVIGFTRA  166 (247)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC------------CchhhHHHHHHHHHHHHH
Confidence            34455666677  8888888887    44444 57899999977553211            1256777774322     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+..++||.|..+...... ...........        .....+...+|+|+++..++..... ..|++
T Consensus       167 la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~--------~~~~r~~~pedva~~v~~L~s~~~~~itG~~  237 (247)
T 3rwb_A          167 LATELGKYNITANAVTPGLIESDGVKASP-HNEAFGFVEML--------QAMKGKGQPEHIADVVSFLASDDARWITGQT  237 (247)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHTSG-GGGGHHHHHHH--------SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHhhhcCeEEEEEeeCcCcCccccccC-hhHHHHHHhcc--------cccCCCcCHHHHHHHHHHHhCccccCCCCCE
Confidence                   3899999999999765211110 00000001000        0011256789999999999986543 35789


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +++.+|.
T Consensus       238 i~vdGG~  244 (247)
T 3rwb_A          238 LNVDAGM  244 (247)
T ss_dssp             EEESTTS
T ss_pred             EEECCCc
Confidence            9998875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.60  E-value=4.3e-05  Score=60.87  Aligned_cols=130  Identities=5%  Similarity=-0.012  Sum_probs=79.9

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+..++|++||...+....            ....|+.+|...+     
T Consensus       107 ~~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~  172 (265)
T 3lf2_A          107 TDEAWSEELQLK--FFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP------------HMVATSAARAGVKNLVRS  172 (265)
T ss_dssp             CHHHHHHHHHHH--HHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT------------TBHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC------------CchhhHHHHHHHHHHHHH
Confidence            344556667777  8888888888743    4456899999977553211            2356777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC---------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD---------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                             .++.+..++||.|..+.....         ....+...+......+       ...+...+|+|++++.++..
T Consensus       173 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~pedvA~~v~fL~s~  245 (265)
T 3lf2_A          173 MAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-------LGRLGKPIEAARAILFLASP  245 (265)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-------TCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-------cCCCcCHHHHHHHHHHHhCc
Confidence                   279999999999876521100         0011111111111011       12367899999999999975


Q ss_pred             CCc-CCCCEEEecCCCc
Q 025270          139 PEA-ASSNIFNLVSDRA  154 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~~  154 (255)
                      ... ..|+++++.+|..
T Consensus       246 ~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          246 LSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             GGTTCCSEEEEESSSCC
T ss_pred             hhcCcCCCEEEECCCCc
Confidence            443 3578999988753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.55  E-value=8.5e-05  Score=59.56  Aligned_cols=126  Identities=12%  Similarity=0.024  Sum_probs=79.9

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC----C-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS----G-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~----~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .+.++.++++|  +.++.++++++...    + -.++|++||...+.....          +..+.|+.+|...+     
T Consensus       130 ~~~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~----------~~~~~Y~asKaa~~~l~~~  197 (276)
T 3r1i_A          130 LEEFQRIQDTN--VTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP----------QQVSHYCTSKAAVVHLTKA  197 (276)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS----------SCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC----------CCcchHHHHHHHHHHHHHH
Confidence            34455566667  88888888887642    2 257999999765432110          11256777775432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+..++||.|..+.....  ..+........+         ...+...+|+|++++.++..... ..|++
T Consensus       198 la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~~~~itG~~  266 (276)
T 3r1i_A          198 MAVELAPHQIRVNSVSPGYIRTELVEPL--ADYHALWEPKIP---------LGRMGRPEELTGLYLYLASAASSYMTGSD  266 (276)
T ss_dssp             HHHHHGGGTEEEEEEEECCBCSTTTGGG--GGGHHHHGGGST---------TSSCBCGGGSHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHhhcCcEEEEEeeCCCcCCccccc--hHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCccccCccCcE
Confidence                   379999999999988754321  112222222111         12367899999999999985543 35789


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +++.+|.
T Consensus       267 i~vdGG~  273 (276)
T 3r1i_A          267 IVIDGGY  273 (276)
T ss_dssp             EEESTTT
T ss_pred             EEECcCc
Confidence            9998875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.54  E-value=2.3e-05  Score=62.89  Aligned_cols=126  Identities=10%  Similarity=0.027  Sum_probs=77.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+...            +....|+.+|...+      
T Consensus       130 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~l  195 (275)
T 4imr_A          130 PNDLAFQLAVN--LGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK------------SVVTAYAATKAAQHNLIQSQ  195 (275)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TTBHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC------------CCchhhHHHHHHHHHHHHHH
Confidence            34455566667  888888888873    3455789999997766411            11245777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCc--HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDC--EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                            .++.+..++||.|..+......  ............. ++       .-+...+|+|++++.++..... ..|+
T Consensus       196 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-p~-------~r~~~pedvA~~v~fL~s~~a~~itG~  267 (275)
T 4imr_A          196 ARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-WM-------GRAGRPEEMVGAALFLASEACSFMTGE  267 (275)
T ss_dssp             HHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-TT-------CSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-cc-------CCCcCHHHHHHHHHHHcCcccCCCCCC
Confidence                  2789999999998765211100  0111111111110 01       1256789999999999986543 3578


Q ss_pred             EEEecCC
Q 025270          146 IFNLVSD  152 (255)
Q Consensus       146 ~~~i~~~  152 (255)
                      ++++.+|
T Consensus       268 ~i~vdGG  274 (275)
T 4imr_A          268 TIFLTGG  274 (275)
T ss_dssp             EEEESSC
T ss_pred             EEEeCCC
Confidence            9998876

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.52  E-value=0.00015  Score=57.52  Aligned_cols=108  Identities=9%  Similarity=-0.013  Sum_probs=69.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhC----------C-----cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS----------G-----VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI   72 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~----------~-----v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~   72 (255)
                      ++..++.|  +.++.++++++...          +     ..+||++||...+.....         .+....|+.+|..
T Consensus       127 ~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~~~~~Y~~sK~a  195 (267)
T 1sny_A          127 LLDTLQTN--TVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT---------DGGMYAYRTSKSA  195 (267)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC---------SCCCHHHHHHHHH
T ss_pred             HHHHHhhh--chHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCC---------CCCchHHHHHHHH
Confidence            34445555  88888888888643          2     468999999877643210         0122457766654


Q ss_pred             Hh------------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           73 SE------------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        73 ~e------------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                      .+            .++.++++|||.|..+....                         ..++..+|+|+.++.++....
T Consensus       196 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~  250 (267)
T 1sny_A          196 LNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------------SAPLDVPTSTGQIVQTISKLG  250 (267)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------------TCSBCHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------------CCCCCHHHHHHHHHHHHHhcC
Confidence            32            37999999999886653211                         024678999999999998654


Q ss_pred             c-CCCCEEEecC
Q 025270          141 A-ASSNIFNLVS  151 (255)
Q Consensus       141 ~-~~~~~~~i~~  151 (255)
                      . .+|..+.+.+
T Consensus       251 ~~~~G~~~~~~g  262 (267)
T 1sny_A          251 EKQNGGFVNYDG  262 (267)
T ss_dssp             GGGTTCEECTTS
T ss_pred             cCCCCcEEccCC
Confidence            3 3455555443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=97.51  E-value=0.00013  Score=63.40  Aligned_cols=121  Identities=12%  Similarity=0.048  Sum_probs=75.5

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------hhCCc
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------ENFSN   78 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------e~~~~   78 (255)
                      ++.+++.|  +.++.++.++++..+.++||++||.+ +++...             ...|+..|...        ..+++
T Consensus       330 ~~~~~~~n--v~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g-------------~~~Yaaaka~l~~la~~~~~~gi~  394 (486)
T 2fr1_A          330 IERASRAK--VLGARNLHELTRELDLTAFVLFSSFASAFGAPG-------------LGGYAPGNAYLDGLAQQRRSDGLP  394 (486)
T ss_dssp             HHHHTHHH--HHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-------------CTTTHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHH--HHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC-------------CHHHHHHHHHHHHHHHHHHhcCCe
Confidence            34444555  99999999999988889999999965 455422             14566555433        34899


Q ss_pred             eEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHH
Q 025270           79 WASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLD  158 (255)
Q Consensus        79 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~  158 (255)
                      +++++||.+.+++....        ... .  .+.   .....+++.+|+++++..++..+..   .+. +.   .+.|.
T Consensus       395 v~~i~pG~~~~~gm~~~--------~~~-~--~~~---~~g~~~i~~e~~a~~l~~~l~~~~~---~~~-v~---~~d~~  453 (486)
T 2fr1_A          395 ATAVAWGTWAGSGMAEG--------PVA-D--RFR---RHGVIEMPPETACRALQNALDRAEV---CPI-VI---DVRWD  453 (486)
T ss_dssp             CEEEEECCBC-----------------------CT---TTTEECBCHHHHHHHHHHHHHTTCS---SCE-EC---EECHH
T ss_pred             EEEEECCeeCCCcccch--------hHH-H--HHH---hcCCCCCCHHHHHHHHHHHHhCCCC---eEE-EE---eCCHH
Confidence            99999999887542211        000 0  011   1224679999999999999987653   222 23   25666


Q ss_pred             HHHHHH
Q 025270          159 GMAKLC  164 (255)
Q Consensus       159 el~~~i  164 (255)
                      .+...+
T Consensus       454 ~~~~~~  459 (486)
T 2fr1_A          454 RFLLAY  459 (486)
T ss_dssp             HHHHHH
T ss_pred             HHhhhh
Confidence            665544

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.49  E-value=0.00027  Score=57.03  Aligned_cols=125  Identities=9%  Similarity=-0.000  Sum_probs=79.0

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCC------cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~------v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-   74 (255)
                      ..++.++++|  +.++.++++++.    +.+      ..+||++||...+...            +....|+.+|...+ 
T Consensus       141 ~~~~~~~~~N--~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~~~~Y~asKaa~~~  206 (291)
T 1e7w_A          141 TATADLFGSN--AIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------LGYTIYTMAKGALEG  206 (291)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------------TTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC------------CCCchhHHHHHHHHH
Confidence            3445566666  888888888776    334      5789999997755321            12356777775432 


Q ss_pred             -----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 -----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 -----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                                 .++.+..++||.|..+. .  ....+...+....+  +   +.   -+...+|+|++++.++..... .
T Consensus       207 l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~~~~~~~~~~~~p--~---~~---r~~~pedvA~~v~~l~s~~~~~i  275 (291)
T 1e7w_A          207 LTRSAALELAPLQIRVNGVGPGLSVLVD-D--MPPAVWEGHRSKVP--L---YQ---RDSSAAEVSDVVIFLCSSKAKYI  275 (291)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SCHHHHHHHHTTCT--T---TT---SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CCHHHHHHHHhhCC--C---CC---CCCCHHHHHHHHHHHhCCcccCc
Confidence                       27999999999986654 2  11222233322211  1   00   256899999999999975433 3


Q ss_pred             CCCEEEecCCCcc
Q 025270          143 SSNIFNLVSDRAV  155 (255)
Q Consensus       143 ~~~~~~i~~~~~~  155 (255)
                      .|+++++.+|..+
T Consensus       276 tG~~i~vdGG~~~  288 (291)
T 1e7w_A          276 TGTCVKVDGGYSL  288 (291)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECCCccc
Confidence            5788988887543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.47  E-value=0.00017  Score=56.99  Aligned_cols=112  Identities=4%  Similarity=-0.036  Sum_probs=60.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+      
T Consensus       104 ~~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~l  169 (252)
T 3h7a_A          104 DRVFRKVWEMA--CWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS------------GFAAFASAKFGLRAVAQSM  169 (252)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC------------CCccHHHHHHHHHHHHHHH
Confidence            33455566666  888888777763    44556899999977553211            2356777775432      


Q ss_pred             ------hCCce-EEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ------NFSNW-ASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ------~~~~~-~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                            .++.+ ..+.||.|..+.....     ......     ......... ++..+|+|++++.++..+..
T Consensus       170 a~e~~~~gi~v~n~v~PG~v~T~~~~~~-----~~~~~~-----~~~~~~~~~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          170 ARELMPKNIHVAHLIIDSGVDTAWVRER-----REQMFG-----KDALANPDL-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             HHHHGGGTEEEEEEEEC--------------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred             HHHhhhcCCEEEEEecCCccCChhhhcc-----chhhhh-----hhhhcCCcc-CCCHHHHHHHHHHHHhCchh
Confidence                  27888 7899998866533221     001000     011111123 88999999999999987765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.46  E-value=0.00015  Score=57.96  Aligned_cols=123  Identities=11%  Similarity=0.028  Sum_probs=68.8

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcc-eEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~-r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.++.++++|  +.++.++++++.    +.+.. ++|++||...+...            +....|+.+|...+      
T Consensus       120 ~~~~~~~~vN--~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~~l  185 (272)
T 2nwq_A          120 DDWDTMVDTN--IKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY------------PGSHVYGGTKAFVEQFSLNL  185 (272)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC------------CCCchHHHHHHHHHHHHHHH
Confidence            3345556666  777666655553    44556 89999998765321            11246777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                            .++.+..++||.|.++......     ... .........    ...++..+|+|++++.++..+....++.+.
T Consensus       186 a~el~~~gIrvn~v~PG~v~T~~~~~~~-----~~~-~~~~~~~~~----~~~~~~pedvA~~v~~l~s~~~~~~g~~i~  255 (272)
T 2nwq_A          186 RCDLQGTGVRVTNLEPGLCESEFSLVRF-----GGD-QARYDKTYA----GAHPIQPEDIAETIFWIMNQPAHLNINSLE  255 (272)
T ss_dssp             HTTCTTSCCEEEEEEECSBC------------------------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             HHHhCccCeEEEEEEcCCCcCcchhccc-----ccc-hHHHHHhhc----cCCCCCHHHHHHHHHHHhCCCccCccceEE
Confidence                  2789999999999876422100     000 000000000    112478999999999999876544446666


Q ss_pred             ecCC
Q 025270          149 LVSD  152 (255)
Q Consensus       149 i~~~  152 (255)
                      +.++
T Consensus       256 v~~~  259 (272)
T 2nwq_A          256 IMPV  259 (272)
T ss_dssp             EEET
T ss_pred             Eeec
Confidence            6544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.46  E-value=0.00023  Score=56.41  Aligned_cols=104  Identities=13%  Similarity=0.088  Sum_probs=63.7

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      ..++.++++|  +.++.++++++.    +.+..+||++||...+....            ....|+.+|...+       
T Consensus       129 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la  194 (262)
T 3rkr_A          129 AEWDALIAVN--LKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA------------DGAAYTASKWGLNGLMTSAA  194 (262)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC------------CCchHHHHHHHHHHHHHHHH
Confidence            3345556666  888888888764    35567899999977653211            2256777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                           .++.+..++||.|..+....         ...         ......++..+|+|+++..++.....
T Consensus       195 ~e~~~~gi~v~~v~PG~v~t~~~~~---------~~~---------~~~~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          195 EELRQHQVRVSLVAPGSVRTEFGVG---------LSA---------KKSALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             HHHGGGTCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred             HHhhhcCcEEEEEecCCCcCCcccc---------ccc---------ccccccCCCHHHHHHHHHHHhcCccc
Confidence                 38999999999886543211         000         01123467899999999999987654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.45  E-value=0.00011  Score=60.28  Aligned_cols=113  Identities=12%  Similarity=0.107  Sum_probs=73.0

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      ..++.++++|  +.++.++++++    ++.+..|||++||.. .++..             ....|+.+|...+      
T Consensus       114 ~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~-------------~~~~Y~aSK~a~~~~~~~l  178 (319)
T 1gz6_A          114 EDWDIIQRVH--LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-------------GQANYSAAKLGLLGLANTL  178 (319)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-------------CCHHHHHHHHHHHHHHHHH
Confidence            3445556666  88887777776    444667999999964 55532             1256777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                            .++.+..++||.+ .+... ...                  +.....++..+|+|.+++.++..+....|++|+
T Consensus       179 a~el~~~gI~vn~v~PG~~-t~~~~-~~~------------------~~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~  238 (319)
T 1gz6_A          179 VIEGRKNNIHCNTIAPNAG-SRMTE-TVM------------------PEDLVEALKPEYVAPLVLWLCHESCEENGGLFE  238 (319)
T ss_dssp             HHHTGGGTEEEEEEEEECC-STTTG-GGS------------------CHHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEE
T ss_pred             HHHhcccCEEEEEEeCCCc-ccccc-ccC------------------ChhhhccCCHHHHHHHHHHHhCchhhcCCCEEE
Confidence                  3789999999876 32111 000                  011123568899999999998765444578999


Q ss_pred             ecCCC
Q 025270          149 LVSDR  153 (255)
Q Consensus       149 i~~~~  153 (255)
                      +.+|.
T Consensus       239 v~GG~  243 (319)
T 1gz6_A          239 VGAGW  243 (319)
T ss_dssp             EETTE
T ss_pred             ECCCe
Confidence            88774

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.40  E-value=0.00012  Score=62.94  Aligned_cols=126  Identities=7%  Similarity=0.017  Sum_probs=77.8

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.+++.|  +.++.++.+++...    +..+||++||...+....            ....|+.+|...+     
T Consensus       308 ~~~~~~~~~~~n--v~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~------------g~~~YaasKaal~~l~~~  373 (454)
T 3u0b_A          308 DEKRWDAVIAVN--LLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR------------GQTNYATTKAGMIGLAEA  373 (454)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC------------CCHHHHHHHHHHHHHHHH
Confidence            344556666777  99999999999865    556899999976442211            2356887776321     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCE
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNI  146 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~  146 (255)
                             .++.+..+.||.|..+.....  ...........        .....+...+|+|+++..++..... ..|++
T Consensus       374 la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~--------~~l~r~g~pedvA~~v~fL~s~~a~~itG~~  443 (454)
T 3u0b_A          374 LAPVLADKGITINAVAPGFIETKMTEAI--PLATREVGRRL--------NSLFQGGQPVDVAELIAYFASPASNAVTGNT  443 (454)
T ss_dssp             HHHHHHTTTCEEEEEEECSBCC------------CHHHHHS--------BTTSSCBCHHHHHHHHHHHHCGGGTTCCSCE
T ss_pred             HHHHhhhcCcEEEEEEcCcccChhhhhc--chhhHHHHHhh--------ccccCCCCHHHHHHHHHHHhCCccCCCCCcE
Confidence                   389999999999976543221  00000111000        0111245789999999998875433 45789


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +++.++.
T Consensus       444 i~vdGG~  450 (454)
T 3u0b_A          444 IRVCGQA  450 (454)
T ss_dssp             EEESSSB
T ss_pred             EEECCcc
Confidence            9988765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.35  E-value=0.00031  Score=56.08  Aligned_cols=113  Identities=12%  Similarity=0.027  Sum_probs=63.8

Q ss_pred             ccccceEEecccCcccHHHHHHHHhh----CC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKS----SG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~----~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.++.++++|  +.++.++++++..    .+  -.+||++||...+....            ....|+.+|...+    
T Consensus       124 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~  189 (272)
T 4dyv_A          124 FAQWKQVVDTN--LTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP------------YSAPYTATKHAITGLTK  189 (272)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhc--cHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC------------CchHHHHHHHHHHHHHH
Confidence            34455666777  8887777776653    32  35899999976553211            2256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA  142 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~  142 (255)
                              .++.+..++||.|..+....         +..+.....  .......+++.+|+|++++.++..+...
T Consensus       190 ~la~e~~~~gI~vn~v~PG~v~T~~~~~---------~~~~~~~~~--~~~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          190 STSLDGRVHDIACGQIDIGNADTPMAQK---------MKAGVPQAD--LSIKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             HHHHHHGGGTEEEEEEEEEECC-----------------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             HHHHHhCccCEEEEEEEECcccChhhhh---------hcccchhhh--hcccccCCCCHHHHHHHHHHHhCCCCcC
Confidence                    27899999999987753221         111100000  0112234789999999999999987663

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.34  E-value=0.0001  Score=58.56  Aligned_cols=124  Identities=8%  Similarity=0.060  Sum_probs=73.9

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      +.++.+++.|  +.++.++++++..    .+..++|++||...+....            ....|+.+|...        
T Consensus       107 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~la  172 (262)
T 1zem_A          107 DDFARVLTIN--VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP------------NMAAYGTSKGAIIALTETAA  172 (262)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT------------TBHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC------------CCchHHHHHHHHHHHHHHHH
Confidence            3345556666  8888888888764    3557899999977653211            124677776432        


Q ss_pred             ----hhCCceEEEecCcccCCCCCCC------------c--HHH-HHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHH
Q 025270           74 ----ENFSNWASFRPQYMIGSGNNKD------------C--EEW-FFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  134 (255)
Q Consensus        74 ----e~~~~~~ilRp~~v~G~~~~~~------------~--~~~-~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  134 (255)
                          ..++.+..++||.+..+.....            .  ... ....+....+         ...+...+|+|++++.
T Consensus       173 ~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~  243 (262)
T 1zem_A          173 LDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP---------MRRYGDINEIPGVVAF  243 (262)
T ss_dssp             HHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST---------TSSCBCGGGSHHHHHH
T ss_pred             HHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC---------CCCCcCHHHHHHHHHH
Confidence                2379999999998865421100            0  000 1111111111         1125788999999999


Q ss_pred             HhcCCCc-CCCCEEEecCC
Q 025270          135 AVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus       135 ~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++..... ..|+++.+.+|
T Consensus       244 l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          244 LLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHSGGGTTCCSCEEEESCC
T ss_pred             HcCchhcCcCCcEEecCCC
Confidence            9875433 34678877654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.23  E-value=0.0003  Score=56.00  Aligned_cols=112  Identities=10%  Similarity=0.044  Sum_probs=64.2

Q ss_pred             ccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+      
T Consensus       102 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaal~~l~~~l  167 (264)
T 3tfo_A          102 VDEWERMIDVN--IKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP------------TAAVYCATKFAVRAISDGL  167 (264)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT------------TCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC------------CChhHHHHHHHHHHHHHHH
Confidence            34455666667  888887777764    34557899999987653211            2256777775432      


Q ss_pred             ---h-CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ---N-FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ---~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                         . ++.+..++||.|..+.....         ..........  .....+...+|+|++++.++..+..
T Consensus       168 a~e~~gIrvn~v~PG~v~T~~~~~~---------~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          168 RQESTNIRVTCVNPGVVESELAGTI---------THEETMAAMD--TYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHCSSEEEEEEEECCC----------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             HHhCCCCEEEEEecCCCcCcccccc---------cchhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCcc
Confidence               2 78899999998876532211         0000000000  0111247899999999999998765

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.22  E-value=0.00086  Score=52.06  Aligned_cols=117  Identities=11%  Similarity=0.048  Sum_probs=71.8

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      .+.++.+++.|  +.++.++++++...   +..++|++||...+...            +....|+.+|...+       
T Consensus       101 ~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~~~~~Y~~sKaa~~~~~~~l~  166 (235)
T 3l77_A          101 EEEFHEMIEVN--LLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI------------PYGGGYVSTKWAARALVRTFQ  166 (235)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC------------CCcchHHHHHHHHHHHHHHHh
Confidence            34455566666  89998888888542   22457777765533221            11245777665433       


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.+..++||.|-.+.....                 .. ......++..+|+|+++..++..+.. ..+++....
T Consensus       167 ~~~~~i~v~~v~PG~v~T~~~~~~-----------------~~-~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~  228 (235)
T 3l77_A          167 IENPDVRFFELRPGAVDTYFGGSK-----------------PG-KPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRS  228 (235)
T ss_dssp             HHCTTSEEEEEEECSBSSSTTTCC-----------------SC-CCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECC
T ss_pred             hcCCCeEEEEEeCCcccccccccc-----------------CC-cccccCCCCHHHHHHHHHHHHcCCCCCccceEEEee
Confidence               289999999998866432210                 00 11112478999999999999998765 234555555


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      +++
T Consensus       229 ~~~  231 (235)
T 3l77_A          229 VYQ  231 (235)
T ss_dssp             TTS
T ss_pred             ccc
Confidence            444

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.20  E-value=0.00039  Score=54.15  Aligned_cols=114  Identities=10%  Similarity=0.066  Sum_probs=71.8

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ++..++.|  +.++.++++++...  .-.++|++||...+...            +....|+.+|...+           
T Consensus        97 ~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~  162 (236)
T 1ooe_A           97 ADLMIKQS--VWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------PSMIGYGMAKAAVHHLTSSLAAKDS  162 (236)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TTBHHHHHHHHHHHHHHHHHHSTTS
T ss_pred             HHHHHHHH--hHHHHHHHHHHHHHhccCCEEEEECchhhccCC------------CCcHHHHHHHHHHHHHHHHHHHHhc
Confidence            44555566  88888888888764  22589999998766321            12256777665432           


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCEEEe
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNL  149 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~i  149 (255)
                         .++.+..++||.+.++.         .......         .....++..+|+|++++.++..+..  ..|+.+++
T Consensus       163 ~~~~gi~v~~v~Pg~v~t~~---------~~~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v  224 (236)
T 1ooe_A          163 GLPDNSAVLTIMPVTLDTPM---------NRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  224 (236)
T ss_dssp             SCCTTCEEEEEEESCBCCHH---------HHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             ccCCCeEEEEEecCcccCcc---------hhhcCCC---------ccccccCCHHHHHHHHHHHHcCCCcccccccEEEE
Confidence               24889999999887652         1111111         1112356789999999876643322  34688888


Q ss_pred             cCCC
Q 025270          150 VSDR  153 (255)
Q Consensus       150 ~~~~  153 (255)
                      .++.
T Consensus       225 ~gg~  228 (236)
T 1ooe_A          225 TTEN  228 (236)
T ss_dssp             EEET
T ss_pred             ecCC
Confidence            7664

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.18  E-value=0.00027  Score=54.83  Aligned_cols=104  Identities=13%  Similarity=0.061  Sum_probs=63.4

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCC---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      +.++..+++|  +.++.++++++...-   -.++|++||...+....            ....|+.+|...+        
T Consensus        94 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~la~  159 (230)
T 3guy_A           94 EQIQTLIENN--LSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA------------QESTYCAVKWAVKGLIESVRL  159 (230)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC------------CCchhHHHHHHHHHHHHHHHH
Confidence            3445556666  888888888876531   12899999987664311            2256887775433        


Q ss_pred             ----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                          .++.+..++||.+..+....         ..  .       ......+++.+|+|+++..++..+..
T Consensus       160 e~~~~gi~v~~v~PG~v~t~~~~~---------~~--~-------~~~~~~~~~~~dvA~~i~~l~~~~~~  212 (230)
T 3guy_A          160 ELKGKPMKIIAVYPGGMATEFWET---------SG--K-------SLDTSSFMSAEDAALMIHGALANIGN  212 (230)
T ss_dssp             HTTTSSCEEEEEEECCC----------------------------------CCCHHHHHHHHHHHCCEETT
T ss_pred             HHHhcCeEEEEEECCcccChHHHh---------cC--C-------CCCcccCCCHHHHHHHHHHHHhCcCC
Confidence                27999999999886542211         10  0       01123578999999999999986543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.18  E-value=0.00014  Score=58.34  Aligned_cols=124  Identities=11%  Similarity=0.071  Sum_probs=75.3

Q ss_pred             cceEEecccCcccHHHHHHHHhhCC---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~   75 (255)
                      ++.++++|  +.++.++++++...-   -.++|++||...+....            ....|+.+|...+         .
T Consensus       108 ~~~~~~vN--~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~e~  173 (281)
T 3zv4_A          108 FDDIFHVN--VKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG------------GGPLYTATKHAVVGLVRQMAFEL  173 (281)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhh--hHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC------------CCchhHHHHHHHHHHHHHHHHHh
Confidence            45566677  888888888876431   14899999977553211            1246777775433         1


Q ss_pred             --CCceEEEecCcccCCCCCCCc--H-H------HHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC-c-C
Q 025270           76 --FSNWASFRPQYMIGSGNNKDC--E-E------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE-A-A  142 (255)
Q Consensus        76 --~~~~~ilRp~~v~G~~~~~~~--~-~------~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~-~  142 (255)
                        .+.+..+.||.|..+......  . .      .+...+....+         ...+...+|+|++++.++..+. . .
T Consensus       174 ~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~~~~~i  244 (281)
T 3zv4_A          174 APHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP---------IGRMPALEEYTGAYVFFATRGDSLPA  244 (281)
T ss_dssp             TTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT---------TSSCCCGGGGSHHHHHHHSTTTSTTC
T ss_pred             cCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC---------CCCCCCHHHHHHHHHHhhcccccccc
Confidence              488999999999776422110  0 0      01111111111         1236788999999999998333 2 4


Q ss_pred             CCCEEEecCCCc
Q 025270          143 SSNIFNLVSDRA  154 (255)
Q Consensus       143 ~~~~~~i~~~~~  154 (255)
                      .|+++++.+|..
T Consensus       245 tG~~i~vdGG~~  256 (281)
T 3zv4_A          245 TGALLNYDGGMG  256 (281)
T ss_dssp             SSCEEEESSSGG
T ss_pred             cCcEEEECCCCc
Confidence            579999988863

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=97.16  E-value=0.00035  Score=60.96  Aligned_cols=123  Identities=13%  Similarity=0.077  Sum_probs=79.0

Q ss_pred             cceEEecccCcccHHHHHHHHhhC-CcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------hCC
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS-GVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------NFS   77 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~-~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------~~~   77 (255)
                      ++.+++.|  +.++.++.+++... +.++||++||.. +++...             ...|+..|...+        .++
T Consensus       359 ~~~~~~~n--v~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g-------------~~~YaaaKa~ld~la~~~~~~gi  423 (511)
T 2z5l_A          359 FETVRGAK--VCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG-------------QGAYAAANAALDALAERRRAAGL  423 (511)
T ss_dssp             HHHHHHHH--HHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT-------------BHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHH--HHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC-------------CHHHHHHHHHHHHHHHHHHHcCC
Confidence            34445556  99999999999877 788999999975 555422             256777665433        389


Q ss_pred             ceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCH
Q 025270           78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  157 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~  157 (255)
                      ++++++||.+-+.+......   ...+..           ....+++.+|+++++..++.++..   . +.+..   +.|
T Consensus       424 ~v~sv~pG~~~~tgm~~~~~---~~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~---~-v~v~~---~d~  482 (511)
T 2z5l_A          424 PATSVAWGLWGGGGMAAGAG---EESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV---C-VTVVD---VDW  482 (511)
T ss_dssp             CCEEEEECCBCSTTCCCCHH---HHHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS---E-EEECC---BCH
T ss_pred             cEEEEECCcccCCccccccc---HHHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC---E-EEEEe---CCH
Confidence            99999999874333222211   111110           112468999999999999987653   2 33332   567


Q ss_pred             HHHHHHHHH
Q 025270          158 DGMAKLCAQ  166 (255)
Q Consensus       158 ~el~~~i~~  166 (255)
                      ..+...+..
T Consensus       483 ~~~~~~~~~  491 (511)
T 2z5l_A          483 ERFAPATNA  491 (511)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHhhhcc
Confidence            766665543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.13  E-value=0.00081  Score=52.78  Aligned_cols=112  Identities=13%  Similarity=0.022  Sum_probs=68.7

Q ss_pred             cccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      +.++.+++.|  +.++.++++++..    .+ .++|++||...+...            +....|+.+|...        
T Consensus       106 ~~~~~~~~~N--~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~la  170 (247)
T 2jah_A          106 TDWTRMIDTN--LLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV------------RNAAVYQATKFGVNAFSETLR  170 (247)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--hHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC------------CCCcHHHHHHHHHHHHHHHHH
Confidence            3445556666  8888888888753    34 689999997755321            1225677776432        


Q ss_pred             ----hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           74 ----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        74 ----e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                          ..++.+..++||.+..+......... .......    .++    +..++..+|+|++++.++..+..
T Consensus       171 ~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~----~~~----~~~~~~pedvA~~v~~l~s~~~~  233 (247)
T 2jah_A          171 QEVTERGVRVVVIEPGTTDTELRGHITHTA-TKEMYEQ----RIS----QIRKLQAQDIAEAVRYAVTAPHH  233 (247)
T ss_dssp             HHHGGGTCEEEEEEECSBSSSGGGGCCCHH-HHHHHHH----HTT----TSCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHhcccCcEEEEEECCCCCCcchhcccchh-hHHHHHh----ccc----ccCCCCHHHHHHHHHHHhCCCcc
Confidence                23899999999999876422111011 1111111    111    11258999999999999986643

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.09  E-value=0.00084  Score=53.93  Aligned_cols=118  Identities=9%  Similarity=0.052  Sum_probs=73.4

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC----CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS----GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~----~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      .+.++.++++|  +.++.++++++...    +..++|++||...+....           +....|+++|...+      
T Consensus       114 ~~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------~~~~~Y~asKaal~~~~~~l  180 (285)
T 3sc4_A          114 LKRFDLMNGIQ--VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW-----------LRPTPYMMAKYGMTLCALGI  180 (285)
T ss_dssp             HHHHHHHHHHH--HHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG-----------SCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC-----------CCCchHHHHHHHHHHHHHHH
Confidence            34455666677  99999999988754    456899999966443210           11256777775432      


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                            .++.+..++||.+...        .+......... +       ...+...+|+|++++.++.......|+.+.
T Consensus       181 a~e~~~~gI~vn~v~PG~~v~t--------~~~~~~~~~~~-~-------~~r~~~pedvA~~~~~l~s~~~~~tG~~i~  244 (285)
T 3sc4_A          181 AEELRDAGIASNTLWPRTTVAT--------AAVQNLLGGDE-A-------MARSRKPEVYADAAYVVLNKPSSYTGNTLL  244 (285)
T ss_dssp             HHHTGGGTCEEEEEECSSCBCC--------HHHHHHHTSCC-C-------CTTCBCTHHHHHHHHHHHTSCTTCCSCEEE
T ss_pred             HHHhcccCcEEEEEeCCCcccc--------HHHHhhccccc-c-------ccCCCCHHHHHHHHHHHhCCcccccceEEE
Confidence                  3899999999843221        12333332221 1       123568899999999999876543456665


Q ss_pred             ecC
Q 025270          149 LVS  151 (255)
Q Consensus       149 i~~  151 (255)
                      +.+
T Consensus       245 ~dg  247 (285)
T 3sc4_A          245 CED  247 (285)
T ss_dssp             HHH
T ss_pred             EcC
Confidence            544

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.06  E-value=0.00071  Score=54.26  Aligned_cols=112  Identities=6%  Similarity=0.033  Sum_probs=67.0

Q ss_pred             ccccceEEecccCcccHHHHHHHHhh----CC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKS----SG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~----~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.++.++++|  +.++.++.+++..    .+  ..++|++||...+...            +....|+.+|...+    
T Consensus       133 ~~~~~~~~~vN--~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------~~~~~Y~asKaa~~~l~~  198 (281)
T 4dry_A          133 FEQWNGIVAAN--LTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR------------PNSAPYTATKHAITGLTK  198 (281)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC------------TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC------------CCChhHHHHHHHHHHHHH
Confidence            34455566677  8887776666553    32  4589999997755321            12356777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                              .++.+..++||.|..+....         +..+ ..... .......++..+|+|++++.++..+..
T Consensus       199 ~la~e~~~~gI~vn~v~PG~v~T~~~~~---------~~~~-~~~~~-~~~~~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          199 STALDGRMHDIACGQIDIGNAATDMTAR---------MSTG-VLQAN-GEVAAEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHGGGTEEEEEEEEECBCC----------------CE-EECTT-SCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHhcccCeEEEEEEECcCcChhhhh---------hcch-hhhhh-hcccccCCCCHHHHHHHHHHHhCCCcc
Confidence                    37999999999887653211         1111 00000 011122367899999999999998765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.06  E-value=0.0001  Score=58.83  Aligned_cols=98  Identities=8%  Similarity=-0.023  Sum_probs=63.2

Q ss_pred             ceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h-
Q 025270            9 KALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E-   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e-   74 (255)
                      +..++.|  +.++.++++++    ++.+..+||++||...+....            ....|+.+|...         + 
T Consensus       133 ~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~e~  198 (272)
T 1yb1_A          133 EKTFEVN--VLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP------------FLLAYCSSKFAAVGFHKTLTDEL  198 (272)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHh--hHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC------------CchhHHHHHHHHHHHHHHHHHHH
Confidence            3445555  77766666555    445778999999987664211            124466655432         2 


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                           .++.++++|||.+.++.....              .      .....+++.+|+|++++.++.++.
T Consensus       199 ~~~~~~gi~v~~v~Pg~v~t~~~~~~--------------~------~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          199 AALQITGVKTTCLCPNFVNTGFIKNP--------------S------TSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHTTCTTEEEEEEEETHHHHCSTTCT--------------H------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHhCCCCeEEEEEeCCcccCCccccc--------------c------ccccCCCCHHHHHHHHHHHHHcCC
Confidence                 278999999999987642210              0      011246899999999999998765

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.04  E-value=0.00093  Score=52.17  Aligned_cols=114  Identities=7%  Similarity=0.027  Sum_probs=73.0

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----------   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----------   74 (255)
                      ++..++.|  +.++.++++++...  +-.++|++||...+...            +....|+.+|...+           
T Consensus       101 ~~~~~~~N--~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asK~a~~~~~~~la~e~~  166 (241)
T 1dhr_A          101 CDLMWKQS--IWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------PGMIGYGMAKGAVHQLCQSLAGKNS  166 (241)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TTBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred             HHHHHHHh--hHHHHHHHHHHHHhhccCCEEEEECCHHHccCC------------CCchHHHHHHHHHHHHHHHHHHHhc
Confidence            34455556  88888998888753  12589999998766421            12256777775432           


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                         .++.+..++||.+-.+.         .......         .....++..+|+|++++.++..... ..|+.+.+.
T Consensus       167 ~~~~gi~v~~v~PG~v~T~~---------~~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          167 GMPSGAAAIAVLPVTLDTPM---------NRKSMPE---------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVV  228 (241)
T ss_dssp             SCCTTCEEEEEEESCEECHH---------HHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             cCCCCeEEEEEecCcccCcc---------ccccCcc---------hhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence               25889999999875431         1111111         1122357889999999999976543 346888887


Q ss_pred             CCC
Q 025270          151 SDR  153 (255)
Q Consensus       151 ~~~  153 (255)
                      ++.
T Consensus       229 g~~  231 (241)
T 1dhr_A          229 TTD  231 (241)
T ss_dssp             EET
T ss_pred             CCC
Confidence            654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.02  E-value=0.0016  Score=51.51  Aligned_cols=124  Identities=10%  Similarity=0.061  Sum_probs=66.6

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.+++.|  +.++.++..++.    +.+..++|++||...+...             ....|+.+|...+       
T Consensus       112 ~~~~~~~~~n--~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------~~~~Y~asK~a~~~~~~~la  176 (260)
T 2qq5_A          112 SMWDDINNVG--LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-------------FNVPYGVGKAACDKLAADCA  176 (260)
T ss_dssp             THHHHHHTTT--THHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-------------SSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhc--chhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-------------CCCchHHHHHHHHHHHHHHH
Confidence            3344555556  777766655553    4556799999998765321             1145776665432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~  147 (255)
                           .++.+.+++||.|..+.........   .............+.  ..+...+|+|++++.++.....  ..|+++
T Consensus       177 ~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~pe~va~~v~~l~s~~~~~~itG~~i  251 (260)
T 2qq5_A          177 HELRRHGVSCVSLWPGIVQTELLKEHMAKE---EVLQDPVLKQFKSAF--SSAETTELSGKCVVALATDPNILSLSGKVL  251 (260)
T ss_dssp             HHHGGGTCEEEEEECCCSCTTTC---------------------------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEE
T ss_pred             HHhccCCeEEEEEecCccccHHHHHhhccc---cccchhHHHHHHhhh--ccCCCHHHHHHHHHHHhcCcccccccceee
Confidence                 3899999999999776432210000   000000000000000  1135789999999999986542  234555


Q ss_pred             Ee
Q 025270          148 NL  149 (255)
Q Consensus       148 ~i  149 (255)
                      ..
T Consensus       252 ~~  253 (260)
T 2qq5_A          252 PS  253 (260)
T ss_dssp             EH
T ss_pred             ch
Confidence            43

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.01  E-value=0.00081  Score=52.61  Aligned_cols=112  Identities=15%  Similarity=0.078  Sum_probs=70.5

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++    ++.+..++|++||...+....            ....|+.+|...+       
T Consensus       117 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la  182 (247)
T 3i1j_A          117 EDFMQVMHVN--VNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA------------NWGAYGVSKFATEGLMQTLA  182 (247)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC------------CcchhHHHHHHHHHHHHHHH
Confidence            3455566666  88998888888    455667999999976553211            1256777775432       


Q ss_pred             ------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 ------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                            .++.+..++||.+-.+         +.......         .....+...+|+|++++.++..... ..|+.+
T Consensus       183 ~e~~~~~~i~v~~v~PG~v~t~---------~~~~~~~~---------~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i  244 (247)
T 3i1j_A          183 DELEGVTAVRANSINPGATRTG---------MRAQAYPD---------ENPLNNPAPEDIMPVYLYLMGPDSTGINGQAL  244 (247)
T ss_dssp             HHHTTTSSEEEEEEECCCCSSH---------HHHHHSTT---------SCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEE
T ss_pred             HHhcCCCCeEEEEEecCcccCc---------cchhcccc---------cCccCCCCHHHHHHHHHHHhCchhccccCeee
Confidence                  2578889999877442         12221111         1122356789999999999975433 345666


Q ss_pred             Ee
Q 025270          148 NL  149 (255)
Q Consensus       148 ~i  149 (255)
                      ++
T Consensus       245 ~~  246 (247)
T 3i1j_A          245 NA  246 (247)
T ss_dssp             EC
T ss_pred             cC
Confidence            54

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.91  E-value=0.0017  Score=53.74  Aligned_cols=117  Identities=15%  Similarity=0.086  Sum_probs=71.4

Q ss_pred             ccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------   73 (255)
                      .+.++.++++|  +.++.++++++    ++.+..+||++||...+....          .+....|+.+|...       
T Consensus       150 ~~~~~~~~~vN--~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~----------~~~~~~Y~aSKaal~~l~~~l  217 (346)
T 3kvo_A          150 TKRLDLMMNVN--TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW----------FKQHCAYTIAKYGMSMYVLGM  217 (346)
T ss_dssp             HHHHHHHHHHT--HHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG----------TSSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC----------CCCchHHHHHHHHHHHHHHHH
Confidence            34455666667  99999999888    444567999999976553210          01225677777542       


Q ss_pred             --h--hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEe
Q 025270           74 --E--NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNL  149 (255)
Q Consensus        74 --e--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i  149 (255)
                        |  .++.+..+.||.+...        .+... ..+..        ....+...+|+|++++.++.......|+++ +
T Consensus       218 a~e~~~gIrvn~v~PG~~i~T--------~~~~~-~~~~~--------~~~r~~~pedvA~~v~~L~s~~~~itG~~i-v  279 (346)
T 3kvo_A          218 AEEFKGEIAVNALWPKTAIHT--------AAMDM-LGGPG--------IESQCRKVDIIADAAYSIFQKPKSFTGNFV-I  279 (346)
T ss_dssp             HHHTTTTCEEEEEECSBCBCC--------HHHHH-HCC----------CGGGCBCTHHHHHHHHHHHTSCTTCCSCEE-E
T ss_pred             HHHhcCCcEEEEEeCCCcccc--------HHHHh-hcccc--------ccccCCCHHHHHHHHHHHHhcCCCCCceEE-E
Confidence              2  2788999999863322        11222 21111        122356889999999999987333445655 4


Q ss_pred             cC
Q 025270          150 VS  151 (255)
Q Consensus       150 ~~  151 (255)
                      .+
T Consensus       280 dg  281 (346)
T 3kvo_A          280 DE  281 (346)
T ss_dssp             HH
T ss_pred             CC
Confidence            43

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.90  E-value=0.0016  Score=52.25  Aligned_cols=101  Identities=10%  Similarity=-0.058  Sum_probs=64.2

Q ss_pred             ceEEecccCcccHHHHHHHHhhC---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------h--
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------E--   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------e--   74 (255)
                      +..+++|  +.++.++++++...   +..++|++||...+....            ....|+.+|...         |  
T Consensus       131 ~~~~~vN--~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asK~a~~~~~~~l~~e~~  196 (286)
T 1xu9_A          131 RKSMEVN--FLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP------------MVAAYSASKFALDGFFSSIRKEYS  196 (286)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH--hhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC------------CccHHHHHHHHHHHHHHHHHHHHh
Confidence            3444555  88888888877542   235899999987653211            225577666432         2  


Q ss_pred             ---hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ---NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                         .++.+++++||.+..+.         ......         +.....+++.+|+|+.++.+++.+..
T Consensus       197 ~~~~~i~v~~v~Pg~v~t~~---------~~~~~~---------~~~~~~~~~~~~vA~~i~~~~~~~~~  248 (286)
T 1xu9_A          197 VSRVNVSITLCVLGLIDTET---------AMKAVS---------GIVHMQAAPKEECALEIIKGGALRQE  248 (286)
T ss_dssp             HHTCCCEEEEEEECCBCCHH---------HHHHSC---------GGGGGGCBCHHHHHHHHHHHHHTTCS
T ss_pred             hcCCCeEEEEeecCccCChh---------HHHhcc---------ccccCCCCCHHHHHHHHHHHHhcCCc
Confidence               27889999999875431         111111         11223568999999999999987643

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.85  E-value=0.00068  Score=52.83  Aligned_cols=104  Identities=10%  Similarity=0.032  Sum_probs=65.7

Q ss_pred             CccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.+.++.++++|  +.++.++++++..    .+ .++|++||...+....            ....|+.+|...+     
T Consensus        97 ~~~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~~~~~  161 (235)
T 3l6e_A           97 TAEQIRRVMESN--LVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKA------------NESLYCASKWGMRGFLES  161 (235)
T ss_dssp             CHHHHHHHHHHH--HHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCS------------SHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--hHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCC------------CCcHHHHHHHHHHHHHHH
Confidence            344456666677  8888888887743    23 3899999976543211            1256777776433     


Q ss_pred             -------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                             .++.+..++||.|-.+.....         . .         .....++..+|+|++++.++..+..
T Consensus       162 la~e~~~~gi~v~~v~PG~v~T~~~~~~---------~-~---------~~~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          162 LRAELKDSPLRLVNLYPSGIRSEFWDNT---------D-H---------VDPSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             HHHHTTTSSEEEEEEEEEEECCCC------------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred             HHHHhhccCCEEEEEeCCCccCcchhcc---------C-C---------CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence                   278999999998865432110         0 0         0111478999999999999987654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.83  E-value=0.0013  Score=52.06  Aligned_cols=113  Identities=12%  Similarity=0.001  Sum_probs=71.7

Q ss_pred             cceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCC-CC----------CCCCCCCC-----------------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKP-AD----------EPPHVEGD-----------------   57 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~-~~----------~~~~~E~~-----------------   57 (255)
                      ++..++.|  +.++.++++++...-  ..+||++||...+.. ..          ..+++|++                 
T Consensus       106 ~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~  183 (276)
T 1wma_A          106 AEVTMKTN--FFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH  183 (276)
T ss_dssp             HHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHhhhhee--eeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhccccc
Confidence            34455566  999999999998763  248999999776521 00          01122211                 


Q ss_pred             --CCCCCCChhHHHHHHH---------h-------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcc
Q 025270           58 --VVKPDAGHVQVEKYIS---------E-------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQF  119 (255)
Q Consensus        58 --~~~~~~~~y~~ek~~~---------e-------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  119 (255)
                        +..| .+.|+.+|...         +       .++.+..++||.|.++....                         
T Consensus       184 ~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------------------------  237 (276)
T 1wma_A          184 QKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------------------------  237 (276)
T ss_dssp             TTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------------------------
T ss_pred             ccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------------------------
Confidence              1112 25688777432         2       37999999999987653221                         


Q ss_pred             eeeeeHHHHHHHHHHHhcCCC---cCCCCEEE
Q 025270          120 TNIAHVRDLSSMLTLAVENPE---AASSNIFN  148 (255)
Q Consensus       120 ~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~  148 (255)
                      ..+.+.+|+|++++.++..+.   ...|+.|.
T Consensus       238 ~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            125799999999999998553   23455554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.76  E-value=0.0017  Score=51.04  Aligned_cols=104  Identities=12%  Similarity=0.087  Sum_probs=64.6

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++++++.    +.+..++|++||...+....            ....|+.+|...+       
T Consensus       108 ~~~~~~~~vN--~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la  173 (250)
T 3nyw_A          108 DNFRKIMEIN--VIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFA------------DGGIYGSTKFALLGLAESLY  173 (250)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECC-------C------------CTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCC------------CCcchHHHHHHHHHHHHHHH
Confidence            3445566666  888888888873    34557899999976442111            1256777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                           .++.+..++||.|..+         +.....  ..       .....+++.+|+|+++..++..+..
T Consensus       174 ~e~~~~gi~vn~v~PG~v~T~---------~~~~~~--~~-------~~~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          174 RELAPLGIRVTTLCPGWVNTD---------MAKKAG--TP-------FKDEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             HHHGGGTEEEEEEEESSBCSH---------HHHHTT--CC-------SCGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HHhhhcCcEEEEEecCcccCc---------hhhhcC--CC-------cccccCCCHHHHHHHHHHHHcCCCc
Confidence                 2799999999988543         111111  11       1123478999999999999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.68  E-value=0.0038  Score=48.82  Aligned_cols=127  Identities=13%  Similarity=0.142  Sum_probs=78.7

Q ss_pred             cCccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      ++.+.|+.++++|  +.++..+.+++..    .+ .++|.+||....-...            ....|.++|...     
T Consensus        95 ~~~~~w~~~~~vN--l~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~------------~~~~Y~asKaav~~ltr  159 (242)
T 4b79_A           95 YDLATFERVLRLN--LSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSA------------DRPAYSASKGAIVQLTR  159 (242)
T ss_dssp             GSHHHHHHHHHHH--THHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCS------------SCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh--hHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCC------------CCHHHHHHHHHHHHHHH
Confidence            4456678888888  7777666666543    23 5899999976442211            125678777532     


Q ss_pred             ----h---hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           74 ----E---NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        74 ----e---~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                          |   +++++-.+-||.|--|..... .-......+....++.         -+...+|+|.+++.++..... ..|
T Consensus       160 ~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaSd~a~~iTG  230 (242)
T 4b79_A          160 SLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVASAAAFLCGPGASFVTG  230 (242)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCccC
Confidence                2   389999999999866532221 1123334444433221         145789999999999875543 357


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       231 ~~l~VDGG~  239 (242)
T 4b79_A          231 AVLAVDGGY  239 (242)
T ss_dssp             CEEEESTTG
T ss_pred             ceEEECccH
Confidence            888887764

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.45  E-value=0.0025  Score=50.23  Aligned_cols=130  Identities=8%  Similarity=0.002  Sum_probs=78.9

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      +.+.+.|+.++++|  +.++..+.+++.    +.+-.++|.+||........            ....|.++|...    
T Consensus       103 ~~~~e~~~~~~~vN--l~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~------------~~~~Y~asKaal~~lt  168 (254)
T 4fn4_A          103 EVSDELWERVLAVN--LYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF------------AGAPYTVAKHGLIGLT  168 (254)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS------------SCHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC------------CChHHHHHHHHHHHHH
Confidence            45566788888888  777666665554    34556899999976442211            125677777532    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                              .+|+.+-.+-||.|--+.....  .-....+......+  ..+      -+...+|+|.+++.++..... .
T Consensus       169 r~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~------R~g~pediA~~v~fLaSd~a~~i  240 (254)
T 4fn4_A          169 RSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS--LSS------RLAEPEDIANVIVFLASDEASFV  240 (254)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT--TCC------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC--CCC------CCcCHHHHHHHHHHHhCchhcCC
Confidence                    2389999999998865532211  11111122211111  101      145689999999999875544 3


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++.+.+|.
T Consensus       241 TG~~i~VDGG~  251 (254)
T 4fn4_A          241 NGDAVVVDGGL  251 (254)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCCEEEeCCCc
Confidence            57899888774

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.44  E-value=0.00064  Score=53.72  Aligned_cols=124  Identities=10%  Similarity=-0.023  Sum_probs=69.6

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh----
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----   75 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~----   75 (255)
                      +.++.++++|  +.++.++++++...      +..+||++||...+...            +....|+.+|...+.    
T Consensus       117 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~  182 (259)
T 1oaa_A          117 AEVNNYWALN--LTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY------------KGWGLYCAGKAARDMLYQV  182 (259)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC------------CCccHHHHHHHHHHHHHHH
Confidence            4455666677  99999999988643      34579999998766321            122567777754432    


Q ss_pred             ------CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEE
Q 025270           76 ------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFN  148 (255)
Q Consensus        76 ------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~  148 (255)
                            ++.+..++||.+-.+.     ...+.... .... ............+...+|+|++++.++.......|+.++
T Consensus       183 la~e~~~i~vn~v~PG~v~T~~-----~~~~~~~~-~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~  256 (259)
T 1oaa_A          183 LAAEEPSVRVLSYAPGPLDNDM-----QQLARETS-KDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKDTFQSGAHVD  256 (259)
T ss_dssp             HHHHCTTEEEEEEECCSBSSHH-----HHHHHHHC-SCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHCCSCTTEEEE
T ss_pred             HHhhCCCceEEEecCCCcCcch-----HHHHhhcc-CChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhhccccCCcEEe
Confidence                  4778888888774321     11110000 0000 000000000123678999999999998743333345554


Q ss_pred             e
Q 025270          149 L  149 (255)
Q Consensus       149 i  149 (255)
                      +
T Consensus       257 v  257 (259)
T 1oaa_A          257 F  257 (259)
T ss_dssp             T
T ss_pred             c
Confidence            4

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.42  E-value=0.0063  Score=48.48  Aligned_cols=129  Identities=7%  Similarity=0.031  Sum_probs=81.1

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------   73 (255)
                      |.+.+.|+.++++|  +.++..+.+++...  +-.++|.+||........            ....|.++|...      
T Consensus       121 ~~~~e~w~~~~~vN--l~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~------------~~~~Y~asKaav~~ltr~  186 (273)
T 4fgs_A          121 EVTEEQYDDTFDRN--VKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP------------AFSVYAASKAALRSFARN  186 (273)
T ss_dssp             SCCHHHHHHHHHHH--THHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             hccHHHHHHHHHHH--hHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC------------CchHHHHHHHHHHHHHHH
Confidence            45667788888888  99999998888754  224799999876442211            125688777542      


Q ss_pred             ---h---hCCceEEEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           74 ---E---NFSNWASFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        74 ---e---~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                         |   +|+.+-.+.||.|--+.....      ....+...+....++       .  -+...+|+|.+++.++.....
T Consensus       187 lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------g--R~g~peeiA~~v~FLaSd~a~  257 (273)
T 4fgs_A          187 WILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM-------G--RVGRAEEVAAAALFLASDDSS  257 (273)
T ss_dssp             HHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT-------S--SCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHHHhCchhc
Confidence               2   278999999998865532211      011222333322221       1  145789999999999975544


Q ss_pred             -CCCCEEEecCCC
Q 025270          142 -ASSNIFNLVSDR  153 (255)
Q Consensus       142 -~~~~~~~i~~~~  153 (255)
                       ..|+++.+.+|.
T Consensus       258 ~iTG~~i~VDGG~  270 (273)
T 4fgs_A          258 FVTGAELFVDGGS  270 (273)
T ss_dssp             TCCSCEEEESTTT
T ss_pred             CccCCeEeECcCh
Confidence             357889888764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.35  E-value=0.0024  Score=50.72  Aligned_cols=125  Identities=9%  Similarity=-0.041  Sum_probs=73.6

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++.+++.|  +.++.++++++...  .-.++|++||...++.             +....|+.+|...+         
T Consensus       114 ~~~~~~~~~N--~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~-------------~~~~~Y~asKaa~~~l~~~la~e  178 (269)
T 2h7i_A          114 ADVSKGIHIS--AYSYASMAKALLPIMNPGGSIVGMDFDPSRAM-------------PAYNWMTVAKSALESVNRFVARE  178 (269)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-------------TTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hHHHHHHHHHHHHhhccCCeEEEEcCcccccc-------------CchHHHHHHHHHHHHHHHHHHHH
Confidence            3345556666  99999999999754  1248999998654321             11245676665432         


Q ss_pred             ---hCCceEEEecCcccCCCCCC-------CcH----HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 ---NFSNWASFRPQYMIGSGNNK-------DCE----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ---~~~~~~ilRp~~v~G~~~~~-------~~~----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                         .++.+..++||.|-.+....       ...    ..+...+....+  +   +   +.+...+|+|++++.++....
T Consensus       179 ~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~---~---rr~~~p~dvA~~v~~L~s~~~  250 (269)
T 2h7i_A          179 AGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP--I---G---WNMKDATPVAKTVCALLSDWL  250 (269)
T ss_dssp             HHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT--T---C---CCTTCCHHHHHHHHHHHSSSC
T ss_pred             hcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCC--c---c---cCCCCHHHHHHHHHHHhCchh
Confidence               28999999999885431100       000    000111111111  0   0   025577999999999997544


Q ss_pred             c-CCCCEEEecCCC
Q 025270          141 A-ASSNIFNLVSDR  153 (255)
Q Consensus       141 ~-~~~~~~~i~~~~  153 (255)
                      . ..|+++.+.+|.
T Consensus       251 ~~itG~~i~vdGG~  264 (269)
T 2h7i_A          251 PATTGDIIYADGGA  264 (269)
T ss_dssp             TTCCSEEEEESTTG
T ss_pred             ccCcceEEEecCCe
Confidence            3 356888888774

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=96.27  E-value=0.00041  Score=57.00  Aligned_cols=80  Identities=6%  Similarity=0.036  Sum_probs=49.5

Q ss_pred             eEEecccCcccHHHHHHHHhhCC-cc-eEEEecccc-ccC--CCCCC-CCCCCCCCCCCCChhHHHHHHH----hhCCce
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSG-VK-QFLFISSAG-IYK--PADEP-PHVEGDVVKPDAGHVQVEKYIS----ENFSNW   79 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~-v~-r~i~~Ss~~-vy~--~~~~~-~~~E~~~~~~~~~~y~~ek~~~----e~~~~~   79 (255)
                      ..++.|  +.++.+++++|++.+ ++ +++++|+.. +..  ..... ......+  +..++...++++.    .++++.
T Consensus       100 ~~~~~N--v~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~--yg~tkl~~er~~~~~a~~~g~~~  175 (327)
T 1y7t_A          100 DLLQVN--GKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNF--TAMTRLDHNRAKAQLAKKTGTGV  175 (327)
T ss_dssp             HHHHHH--HHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGE--EECCHHHHHHHHHHHHHHHTCCG
T ss_pred             HHHHHH--HHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhhe--eccchHHHHHHHHHHHHHhCcCh
Confidence            344445  999999999999975 64 788888754 111  00000 0111111  2235666666543    348999


Q ss_pred             EEEecCcccCCCCC
Q 025270           80 ASFRPQYMIGSGNN   93 (255)
Q Consensus        80 ~ilRp~~v~G~~~~   93 (255)
                      +++|+++|||++..
T Consensus       176 ~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          176 DRIRRMTVWGNHSS  189 (327)
T ss_dssp             GGEECCEEEBCSST
T ss_pred             hheeeeEEEcCCCC
Confidence            99999999998764

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.26  E-value=0.015  Score=45.66  Aligned_cols=122  Identities=10%  Similarity=0.154  Sum_probs=76.8

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      +.+.+.|+.++++|  +.++..+.+++.    +.+ .++|.+||...+....            ....|.++|...    
T Consensus        93 ~~~~e~~~~~~~vN--l~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~------------~~~~Y~asKaal~~lt  157 (247)
T 3ged_A           93 SLLYEEFDYILSVG--LKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEP------------DSEAYASAKGGIVALT  157 (247)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHH--hHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCC------------CCHHHHHHHHHHHHHH
Confidence            34566778888888  877777666654    334 5899999976543211            125677777542    


Q ss_pred             -----hh--CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCE
Q 025270           74 -----EN--FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  146 (255)
Q Consensus        74 -----e~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  146 (255)
                           |.  ++.+-.+.||.|--+....     +........+  +     .  -+...+|+|.++..++.. +-..|++
T Consensus       158 k~lA~ela~~IrVN~I~PG~i~t~~~~~-----~~~~~~~~~P--l-----~--R~g~pediA~~v~fL~s~-~~iTG~~  222 (247)
T 3ged_A          158 HALAMSLGPDVLVNCIAPGWINVTEQQE-----FTQEDCAAIP--A-----G--KVGTPKDISNMVLFLCQQ-DFITGET  222 (247)
T ss_dssp             HHHHHHHTTTSEEEEEEECSBCCCC--------CCHHHHHTST--T-----S--SCBCHHHHHHHHHHHHHC-SSCCSCE
T ss_pred             HHHHHHHCCCCEEEEEecCcCCCCCcHH-----HHHHHHhcCC--C-----C--CCcCHHHHHHHHHHHHhC-CCCCCCe
Confidence                 22  7889999999885443221     1222222211  1     1  145789999999999974 3345789


Q ss_pred             EEecCCC
Q 025270          147 FNLVSDR  153 (255)
Q Consensus       147 ~~i~~~~  153 (255)
                      +.+.+|-
T Consensus       223 i~VDGG~  229 (247)
T 3ged_A          223 IIVDGGM  229 (247)
T ss_dssp             EEESTTG
T ss_pred             EEECcCH
Confidence            9988874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.21  E-value=0.0042  Score=49.02  Aligned_cols=129  Identities=12%  Similarity=0.083  Sum_probs=78.7

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh-----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~-----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---   73 (255)
                      +.+.+.|+.++++|  +.++..+.+++.     +.+-.++|.+||........            ....|.++|...   
T Consensus       104 ~~~~e~~~~~~~vN--l~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~------------~~~~Y~asKaal~~l  169 (255)
T 4g81_D          104 ELELENWQKVIDTN--LTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP------------TVAPYTAAKGGIKML  169 (255)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT------------TCHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHH--hHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC------------CchhHHHHHHHHHHH
Confidence            45667788888888  877777666553     23445899999976543211            125677777432   


Q ss_pred             ---------hhCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 ---------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 ---------e~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                               .+|+.+-.+-||.|.-+...... -..+...+....++       .  -+...+|+|.+++.++..... .
T Consensus       170 tr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl-------~--R~g~pediA~~v~fL~S~~a~~i  240 (255)
T 4g81_D          170 TCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPS-------Q--RWGRPEELIGTAIFLSSKASDYI  240 (255)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTT-------C--SCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCC-------C--CCcCHHHHHHHHHHHhCchhCCC
Confidence                     23899999999988654221100 01112222222211       1  145678999999998875443 3


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++.+.+|.
T Consensus       241 TG~~i~VDGG~  251 (255)
T 4g81_D          241 NGQIIYVDGGW  251 (255)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCCEEEECCCe
Confidence            57899888764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.16  E-value=0.0063  Score=47.69  Aligned_cols=129  Identities=12%  Similarity=0.102  Sum_probs=79.5

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCC-cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~-v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---   73 (255)
                      +++.+.|+.++++|  +.++..+.+++.    +.+ -.++|.+||........            ....|.++|...   
T Consensus        97 ~~~~~~w~~~~~vN--l~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~------------~~~~Y~asKaav~~l  162 (247)
T 4hp8_A           97 EFSELDWDEVMDVN--LKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI------------RVPSYTAAKHGVAGL  162 (247)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS------------SCHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHH--hHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC------------CChHHHHHHHHHHHH
Confidence            45667788889999  888777776643    222 35899999976442211            125688777532   


Q ss_pred             ---------hhCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 ---------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 ---------e~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                               .+|+.+-.+-||.|--+...... -......+....+  +     .  -+-..+|+|.+++.++..... .
T Consensus       163 tr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~P--l-----g--R~g~peeiA~~v~fLaSd~a~~i  233 (247)
T 4hp8_A          163 TKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIP--A-----G--RWGHSEDIAGAAVFLSSAAADYV  233 (247)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCT--T-----S--SCBCTHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCC--C-----C--CCcCHHHHHHHHHHHhCchhcCC
Confidence                     23899999999988544221100 0112222333222  1     1  145679999999998875544 3


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++.+.+|.
T Consensus       234 TG~~i~VDGG~  244 (247)
T 4hp8_A          234 HGAILNVDGGW  244 (247)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCCeEEECccc
Confidence            57888888763

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.16  E-value=0.0023  Score=52.45  Aligned_cols=71  Identities=11%  Similarity=-0.073  Sum_probs=48.4

Q ss_pred             ccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      .++.++++|  +.++.++++++    ++.+..+||++||...+....            ....|+.+|...+        
T Consensus       106 ~~~~~~~vN--~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~------------~~~~Y~aSK~a~~~~~~~la~  171 (327)
T 1jtv_A          106 AVASVLDVN--VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP------------FNDVYCASKFALEGLCESLAV  171 (327)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH--hHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC------------CChHHHHHHHHHHHHHHHHHH
Confidence            345556666  88988888886    344667999999977653211            1246776665432        


Q ss_pred             ----hCCceEEEecCcccCCC
Q 025270           75 ----NFSNWASFRPQYMIGSG   91 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~   91 (255)
                          .++.+++++||.|..+.
T Consensus       172 el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          172 LLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             HHGGGTEEEEEEEECCBCC--
T ss_pred             HhhhcCcEEEEEEeCcccChH
Confidence                38999999999997764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.14  E-value=0.0033  Score=56.13  Aligned_cols=114  Identities=8%  Similarity=-0.020  Sum_probs=71.6

Q ss_pred             CccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      +.+.++.++++|  +.++.++++++    ++.+..+||++||.+. ++..             ....|+++|....    
T Consensus       122 ~~~~~~~~~~vN--l~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~-------------~~~~Y~asKaal~~lt~  186 (613)
T 3oml_A          122 SEQDWNLVNDVH--LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF-------------GQVNYTAAKMGLIGLAN  186 (613)
T ss_dssp             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT-------------TCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-------------CChHHHHHHHHHHHHHH
Confidence            344566667777  88888888887    4556679999999664 4332             1256787775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCE
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNI  146 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~  146 (255)
                              .++.+..+.||.+- +             +..+..      +......+..+|+|.+++.++.......|++
T Consensus       187 ~la~e~~~~gI~vn~v~Pg~~t-~-------------~~~~~~------~~~~~~~~~pedvA~~v~~L~s~~~~~tG~~  246 (613)
T 3oml_A          187 TVAIEGARNNVLCNVIVPTAAS-R-------------MTEGIL------PDILFNELKPKLIAPVVAYLCHESCEDNGSY  246 (613)
T ss_dssp             HHHHHHGGGTEEEEEEEEC--------------------CCCC------CHHHHTTCCGGGTHHHHHHTTSTTCCCCSCE
T ss_pred             HHHHHhCccCeEEEEEECCCCC-h-------------hhhhcc------chhhhhcCCHHHHHHHHHHhcCCCcCCCceE
Confidence                    27899999997531 1             111100      0111234578999999999988763345788


Q ss_pred             EEecCC
Q 025270          147 FNLVSD  152 (255)
Q Consensus       147 ~~i~~~  152 (255)
                      +++.+|
T Consensus       247 i~vdGG  252 (613)
T 3oml_A          247 IESAAG  252 (613)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            887765

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.13  E-value=0.01  Score=46.91  Aligned_cols=129  Identities=7%  Similarity=0.041  Sum_probs=74.7

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.|+.++++|  +.++..+.+++.    +.+-.++|++||....-...           .....|+++|...     
T Consensus        99 ~~~e~~~~~~~vN--l~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~-----------~~~~~Y~asKaal~~lt~  165 (261)
T 4h15_A           99 LSDDDWYNELSLN--LFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP-----------ESTTAYAAAKAALSTYSK  165 (261)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------TTCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH--hHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC-----------CccHHHHHHHHHHHHHHH
Confidence            3455667777777  777666665554    44556899999966432111           0124577666432     


Q ss_pred             -------hhCCceEEEecCcccCCCCCCC-------------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHH
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKD-------------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  133 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~-------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  133 (255)
                             .+|+.+..+.||.|--+.....             ....+........  ++       .-+...+|+|.+++
T Consensus       166 ~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Pl-------gR~g~peevA~~v~  236 (261)
T 4h15_A          166 AMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGI--PL-------GRPAKPEEVANLIA  236 (261)
T ss_dssp             HHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCC--TT-------SSCBCHHHHHHHHH
T ss_pred             HHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCC--CC-------CCCcCHHHHHHHHH
Confidence                   2389999999998743311000             0001111111111  11       12567899999999


Q ss_pred             HHhcCCCc-CCCCEEEecCCC
Q 025270          134 LAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       134 ~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .++..... ..|+.+.+.+|-
T Consensus       237 fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          237 FLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhcCccCcEEEECCcC
Confidence            98875443 357899988775

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.13  E-value=0.007  Score=48.76  Aligned_cols=116  Identities=11%  Similarity=-0.022  Sum_probs=67.7

Q ss_pred             ceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCC-------------------------------CCC
Q 025270            9 KALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADE-------------------------------PPH   53 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~-------------------------------~~~   53 (255)
                      +.++++|  +.++.++++++.    +.+..++|++||...+.....                               ...
T Consensus       146 ~~~~~~N--~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (311)
T 3o26_A          146 EECLKIN--YNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENL  223 (311)
T ss_dssp             HHHHHHH--THHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTC
T ss_pred             hhheeee--eehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccc
Confidence            4446667  888777777764    445579999999764421100                               001


Q ss_pred             CCCCCCCCCCChhHHHHHHHhh----------CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeee
Q 025270           54 VEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIA  123 (255)
Q Consensus        54 ~E~~~~~~~~~~y~~ek~~~e~----------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i  123 (255)
                      .+.....+....|+.+|.+.+.          ++.+..++||.|..+....             .            ...
T Consensus       224 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~-------------~------------~~~  278 (311)
T 3o26_A          224 IETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG-------------I------------GNY  278 (311)
T ss_dssp             TTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT-------------C------------CSB
T ss_pred             cccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC-------------C------------CCC
Confidence            1111122233568888865442          6889999999886542111             0            124


Q ss_pred             eHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270          124 HVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus       124 ~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      ..++.++.++.++..+....++.|..++
T Consensus       279 ~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          279 TAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             CHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             CHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence            6788999999888766543234444443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.06  E-value=0.0038  Score=49.74  Aligned_cols=112  Identities=10%  Similarity=0.025  Sum_probs=67.0

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.++.++++|  +.++.++.+++.    +.+..++|++||...+....          .+....|+.+|...+       
T Consensus       112 ~~~~~~~~vN--~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------~~~~~~Y~asKaal~~l~~~la  179 (274)
T 3e03_A          112 KRFDLMQQVN--ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW----------WGAHTGYTLAKMGMSLVTLGLA  179 (274)
T ss_dssp             HHHHHHHHHT--HHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH----------HHHCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHh--hHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----------CCCCchHHHHHHHHHHHHHHHH
Confidence            3445566666  888888888774    34556899999976543210          001245777775432       


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                           .++.+..++||.+......         ....+.         ....+...+|+|++++.++..... ..|+++
T Consensus       180 ~e~~~~gI~vn~v~PG~~v~T~~~---------~~~~~~---------~~~~~~~pedvA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          180 AEFGPQGVAINALWPRTVIATDAI---------NMLPGV---------DAAACRRPEIMADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHGGGTCEEEEEECSBCBCC----------------CC---------CGGGSBCTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred             HHhhhcCEEEEEEECCcccccchh---------hhcccc---------cccccCCHHHHHHHHHHHhCccccccCCeEE
Confidence                 2799999999854332111         111111         112267899999999999986544 345666

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.93  E-value=0.031  Score=45.32  Aligned_cols=126  Identities=9%  Similarity=-0.026  Sum_probs=74.0

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH---------Hh
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI---------SE   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~---------~e   74 (255)
                      +.++.++++|  +.++.++++++...  .-.++|++||...+.....           ....|+.+|..         .|
T Consensus       144 ~~~~~~~~~N--~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-----------~~~~Y~asKaal~~l~~~la~e  210 (315)
T 2o2s_A          144 KGYLAASSNS--AYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPG-----------YGGGMSSAKAALESDTRTLAWE  210 (315)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCTT-----------CCTTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhh--hHHHHHHHHHHHHHHhcCCEEEEEecccccccCCC-----------ccHHHHHHHHHHHHHHHHHHHH
Confidence            3455566666  99999999998754  1158999999765432111           00246666542         12


Q ss_pred             ----hCCceEEEecCcccCCCCC-------CCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 ----NFSNWASFRPQYMIGSGNN-------KDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                          .++.+..++||.|-.+...       ......+...+....  ++       ..+...+|+|++++.++..... .
T Consensus       211 l~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--p~-------~r~~~pedvA~~v~~L~s~~~~~i  281 (315)
T 2o2s_A          211 AGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNA--PL-------RRDLHSDDVGGAALFLLSPLARAV  281 (315)
T ss_dssp             HHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHS--SS-------CCCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             hCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccC--CC-------CCCCCHHHHHHHHHHHhCchhccC
Confidence                4899999999988543100       000011111111111  11       1246889999999999875433 3


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+.+.+.+|.
T Consensus       282 tG~~i~vdGG~  292 (315)
T 2o2s_A          282 SGVTLYVDNGL  292 (315)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCCEEEECCCe
Confidence            57888888775

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.87  E-value=0.025  Score=44.48  Aligned_cols=122  Identities=8%  Similarity=-0.073  Sum_probs=73.2

Q ss_pred             ceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH------------h
Q 025270            9 KALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------E   74 (255)
Q Consensus         9 d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~------------e   74 (255)
                      +.+++.|  +.+...+..++...  +-.++|.+||....-..            +....|.++|...            .
T Consensus       115 ~~~~~vn--~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~------------~~~~~Y~asKaal~~ltr~lA~Ela~  180 (256)
T 4fs3_A          115 LLAQDIS--SYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV------------QNYNVMGVAKASLEANVKYLALDLGP  180 (256)
T ss_dssp             HHHHHHH--THHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC------------TTTHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHH--HHHHHHHHHHHHHHhccCCEEEEEeccccccCc------------ccchhhHHHHHHHHHHHHHHHHHhCc
Confidence            3344444  66666666666543  22579999996543211            1225677777532            2


Q ss_pred             hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           75 NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      +|+.+..+.||.|--+..... ....+...+....++.         -+...+|+|.+++.++..... ..|+++.+.+|
T Consensus       181 ~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          181 DNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK---------RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             GTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            389999999998865432221 2233444444333211         145789999999999875443 35788888776


Q ss_pred             C
Q 025270          153 R  153 (255)
Q Consensus       153 ~  153 (255)
                      -
T Consensus       252 ~  252 (256)
T 4fs3_A          252 F  252 (256)
T ss_dssp             G
T ss_pred             H
Confidence            4

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=95.77  E-value=0.018  Score=45.47  Aligned_cols=129  Identities=12%  Similarity=0.077  Sum_probs=77.9

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      |.+.+.|+.+++.|  +.++..+.+++.    +.+ .++|.+||........            ....|.++|...    
T Consensus       100 ~~~~e~~~~~~~vN--l~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~------------~~~~Y~asKaav~~lt  164 (258)
T 4gkb_A          100 DAGRDAFVASLERN--LIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQG------------NTSGYCASKGAQLALT  164 (258)
T ss_dssp             TSCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCS------------SCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHH--hHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCC------------CchHHHHHHHHHHHHH
Confidence            34556677777888  777776666654    323 5799999976542211            125677777532    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCc-----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                              .+|+.+-.+.||.|--+......     .......+....+  +   +   .-+...+|+|.+++.++....
T Consensus       165 r~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p--l---g---~R~g~peeiA~~v~fLaS~~a  236 (258)
T 4gkb_A          165 REWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVP--L---G---RRFTTPDEIADTAVFLLSPRA  236 (258)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCT--T---T---TSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCC--C---C---CCCcCHHHHHHHHHHHhCchh
Confidence                    23899999999998655432210     0111222222221  1   1   125678999999999887554


Q ss_pred             c-CCCCEEEecCCC
Q 025270          141 A-ASSNIFNLVSDR  153 (255)
Q Consensus       141 ~-~~~~~~~i~~~~  153 (255)
                      . ..|+++.+.+|.
T Consensus       237 ~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          237 SHTTGEWLFVDGGY  250 (258)
T ss_dssp             TTCCSCEEEESTTT
T ss_pred             cCccCCeEEECCCc
Confidence            3 457899988875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.49  E-value=0.008  Score=52.13  Aligned_cols=108  Identities=16%  Similarity=0.132  Sum_probs=71.2

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------hhC
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------ENF   76 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------e~~   76 (255)
                      +.++.+++.|  +.++.++.+++...+..+||++||.. +++...             ...|++.|...        ..|
T Consensus       342 e~~~~vl~~n--v~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g-------------~~~YaAaKa~ldala~~~~~~G  406 (496)
T 3mje_A          342 GQLDALMRAK--LTAARHLHELTADLDLDAFVLFSSGAAVWGSGG-------------QPGYAAANAYLDALAEHRRSLG  406 (496)
T ss_dssp             HHHHHHHHTT--HHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT-------------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHH--HHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC-------------cHHHHHHHHHHHHHHHHHHhcC
Confidence            3445566666  99999999999988888999999966 444322             25677777543        348


Q ss_pred             CceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           77 SNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      ++++++.||.+.+.+....  ......+.+.           -...+..++.++++..++..+..
T Consensus       407 i~v~sV~pG~w~~~gm~~~--~~~~~~l~~~-----------g~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          407 LTASSVAWGTWGEVGMATD--PEVHDRLVRQ-----------GVLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             CCCEEEEECEESSSCC--------CHHHHHT-----------TEEEECHHHHHHHHHHHHHHTCS
T ss_pred             CeEEEEECCcccCCccccC--hHHHHHHHhc-----------CCCCCCHHHHHHHHHHHHcCCCc
Confidence            9999999998876543321  0011111111           12356889999999999986653

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=95.21  E-value=0.019  Score=46.74  Aligned_cols=136  Identities=6%  Similarity=-0.072  Sum_probs=66.3

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHH-------HH-hh
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-------IS-EN   75 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~-------~~-e~   75 (255)
                      ..++.++++|  +.++.++++++...  .-.++|++||...+......      ...+..+|.+.+.+       +. ..
T Consensus       157 ~~~~~~~~vN--~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~------~~~Y~asKaal~~l~~~la~el~~~~  228 (319)
T 2ptg_A          157 KGYLAAVSSS--SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGY------GGGMSSAKAALESDCRTLAFEAGRAR  228 (319)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEEECC------------------------THHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHh--hHHHHHHHHHHHHHHhcCceEEEEeccccccccCcc------chhhHHHHHHHHHHHHHHHHHhcccc
Confidence            3455566666  99999999998764  11589999997654321110      00122244332221       12 25


Q ss_pred             CCceEEEecCcccCCCCCCCc---HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           76 FSNWASFRPQYMIGSGNNKDC---EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                      ++.+..++||.|..+......   ...+.......     ........-+...+|+|++++.++..... ..|+++.+.+
T Consensus       229 gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  303 (319)
T 2ptg_A          229 AVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDY-----SEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN  303 (319)
T ss_dssp             CCEEEEEEECCCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CeeEEEEeeCCccChhhhhcccccchhhHHHHHHH-----HhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            899999999988665322100   00000000000     00000111256889999999999975433 3578898888


Q ss_pred             CCc
Q 025270          152 DRA  154 (255)
Q Consensus       152 ~~~  154 (255)
                      |..
T Consensus       304 G~~  306 (319)
T 2ptg_A          304 GLH  306 (319)
T ss_dssp             TCT
T ss_pred             Cce
Confidence            753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=94.77  E-value=0.047  Score=44.57  Aligned_cols=71  Identities=4%  Similarity=-0.069  Sum_probs=47.0

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCC-hhHHHHHH---------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAG-HVQVEKYI---------   72 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~-~y~~ek~~---------   72 (255)
                      ...++.++++|  +.++..+..++...=  -.++|++||...+....            ... .|+++|..         
T Consensus       136 ~~~~~~~~~vN--~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~------------~~~~~Y~asKaal~~~~~~la  201 (329)
T 3lt0_A          136 RKGYLDALSKS--SYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP------------GYGGGMSSAKAALESDTRVLA  201 (329)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT------------TCTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCC------------cchHHHHHHHHHHHHHHHHHH
Confidence            34455566667  999999999887541  14899999976543211            112 56666643         


Q ss_pred             ---Hh-hCCceEEEecCcccC
Q 025270           73 ---SE-NFSNWASFRPQYMIG   89 (255)
Q Consensus        73 ---~e-~~~~~~ilRp~~v~G   89 (255)
                         .. .++.+..+.||.|-.
T Consensus       202 ~el~~~~gI~vn~v~PG~v~T  222 (329)
T 3lt0_A          202 YHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             HHHHHHHCCEEEEEEECCCCC
T ss_pred             HHhCCccCeEEEEEecceeec
Confidence               23 589999999998854

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=93.83  E-value=0.042  Score=48.02  Aligned_cols=123  Identities=10%  Similarity=0.025  Sum_probs=77.0

Q ss_pred             cccceEEecccCcccHHHHHHHHhhCC-----cceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHhh----
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSSG-----VKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISEN----   75 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~~-----v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~----   75 (255)
                      ..++.+++.|  +.|+.++.+++....     ..+||++||.+.+ +..             ....|++.|...+.    
T Consensus       364 ~~~~~v~~~n--v~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~-------------g~~~YaaaKa~l~~lA~~  428 (525)
T 3qp9_A          364 DALARVVTAK--ATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA-------------GQGAYAAGTAFLDALAGQ  428 (525)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT-------------TCHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHH--HHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC-------------CCHHHHHHHHHHHHHHHH
Confidence            3445566666  999999999998765     6789999997643 322             23678888875442    


Q ss_pred             ----CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           76 ----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        76 ----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                          +++++.+.||.+ +-+....  ......+...        |   ...+..+++++++..++..+..   .+ .+. 
T Consensus       429 ~~~~gi~v~sI~pG~~-~tgm~~~--~~~~~~~~~~--------g---~~~l~pee~a~~l~~~l~~~~~---~v-~v~-  489 (525)
T 3qp9_A          429 HRADGPTVTSVAWSPW-EGSRVTE--GATGERLRRL--------G---LRPLAPATALTALDTALGHGDT---AV-TIA-  489 (525)
T ss_dssp             CCSSCCEEEEEEECCB-TTSGGGS--SHHHHHHHHT--------T---BCCBCHHHHHHHHHHHHHHTCS---EE-EEC-
T ss_pred             HHhCCCCEEEEECCcc-ccccccc--hhhHHHHHhc--------C---CCCCCHHHHHHHHHHHHhCCCC---eE-EEE-
Confidence                899999999988 3221100  0111111111        1   1357899999999999987653   22 233 


Q ss_pred             CCccCHHHHHHHH
Q 025270          152 DRAVTLDGMAKLC  164 (255)
Q Consensus       152 ~~~~s~~el~~~i  164 (255)
                        .+.|..+...+
T Consensus       490 --~~dw~~~~~~~  500 (525)
T 3qp9_A          490 --DVDWSSFAPGF  500 (525)
T ss_dssp             --CBCHHHHHHHH
T ss_pred             --eCCHHHHHhhc
Confidence              25565555544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=93.02  E-value=0.21  Score=44.43  Aligned_cols=115  Identities=12%  Similarity=0.099  Sum_probs=69.5

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      .+.+.++.++++|  +.++.++.+++.    +.+-.++|++||... ++..             ....|+++|...    
T Consensus       414 ~~~~~~~~~~~vN--l~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~-------------~~~~Y~asKaal~~lt  478 (604)
T 2et6_A          414 MSKQEWDSVQQVH--LIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF-------------GQANYSSSKAGILGLS  478 (604)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-------------TBHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-------------CChhHHHHHHHHHHHH
Confidence            3455677778888  777777666654    344468999999653 3321             125688777542    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                              .+++.+..+.||.  .   +. +...    ... .         ........+|+|.++..++.......|+
T Consensus       479 ~~la~El~~~gIrVn~v~PG~--~---T~-m~~~----~~~-~---------~~~~~~~pe~vA~~v~~L~s~~~~itG~  538 (604)
T 2et6_A          479 KTMAIEGAKNNIKVNIVAPHA--E---TA-MTLS----IMR-E---------QDKNLYHADQVAPLLVYLGTDDVPVTGE  538 (604)
T ss_dssp             HHHHHHHGGGTEEEEEEEECC--C---CC-C-----------------------CCSSCGGGTHHHHHHTTSTTCCCCSC
T ss_pred             HHHHHHhCccCeEEEEEcCCC--C---Cc-cccc----cCc-h---------hhccCCCHHHHHHHHHHHhCCccCCCCc
Confidence                    2389999999972  1   11 1000    000 0         0012347899999999988754434568


Q ss_pred             EEEecCC
Q 025270          146 IFNLVSD  152 (255)
Q Consensus       146 ~~~i~~~  152 (255)
                      ++.+.+|
T Consensus       539 ~~~vdGG  545 (604)
T 2et6_A          539 TFEIGGG  545 (604)
T ss_dssp             EEEEETT
T ss_pred             EEEECCC
Confidence            8887766

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=89.58  E-value=0.32  Score=43.27  Aligned_cols=133  Identities=11%  Similarity=0.116  Sum_probs=81.8

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      .+.+.++.++++|  +.++.++.+++.    +.+-.++|++||.. .++..             ....|+++|...    
T Consensus       110 ~~~~~~~~~~~vN--l~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~-------------~~~~Y~asKaal~~lt  174 (604)
T 2et6_A          110 MTEKDYKLVIDVH--LNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF-------------GQANYASAKSALLGFA  174 (604)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-------------TBHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH--hHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-------------CchHHHHHHHHHHHHH
Confidence            3455677788888  877777666654    33446899999965 34321             125678777542    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                              .+|+.+..+.|+ +    .+.     +....   ..       .........+|+|.++..++.......|+
T Consensus       175 ~~la~El~~~gIrVn~v~Pg-~----~T~-----m~~~~---~~-------~~~~~~~~pe~vA~~v~~L~s~~~~itG~  234 (604)
T 2et6_A          175 ETLAKEGAKYNIKANAIAPL-A----RSR-----MTESI---MP-------PPMLEKLGPEKVAPLVLYLSSAENELTGQ  234 (604)
T ss_dssp             HHHHHHHGGGTEEEEEEEEC-C----CCH-----HHHTT---SC-------HHHHTTCSHHHHHHHHHHHTSSSCCCCSC
T ss_pred             HHHHHHhCccCeEEEEEccC-C----cCc-----ccccc---CC-------hhhhccCCHHHHHHHHHHHhCCcccCCCC
Confidence                    238899999995 2    111     11100   00       00112347899999999999765334467


Q ss_pred             EEEecCC------------------CccCHHHHHHHHHHHhCC
Q 025270          146 IFNLVSD------------------RAVTLDGMAKLCAQAAGL  170 (255)
Q Consensus       146 ~~~i~~~------------------~~~s~~el~~~i~~~~g~  170 (255)
                      ++.+.+|                  ...+..++.+.+.+....
T Consensus       235 ~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          235 FFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             EEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             EEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence            7776654                  245778888888776544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=87.56  E-value=0.73  Score=42.38  Aligned_cols=110  Identities=14%  Similarity=0.106  Sum_probs=68.3

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhCCcceEEEecccc-ccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGDVVKPDAGHVQVEKYISE--------   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~-vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--------   74 (255)
                      +.+.++.+++.|  +.|+.++.+++.. .. +||.+||.+ ..|..             .+..|++.|...+        
T Consensus       631 t~e~~~~~~~~n--v~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~-------------g~~~YaAaka~~~alA~~~~~  693 (795)
T 3slk_A          631 TVERLDQVLRPK--VDGARNLLELIDP-DV-ALVLFSSVSGVLGSG-------------GQGNYAAANSFLDALAQQRQS  693 (795)
T ss_dssp             CHHHHHHHHCCC--CCHHHHHHHHSCT-TS-EEEEEEETHHHHTCS-------------SCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHhh-CC-EEEEEccHHhcCCCC-------------CCHHHHHHHHHHHHHHHHHHH
Confidence            445566677777  9999999999843 44 899999966 44432             2356887775433        


Q ss_pred             hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      .|+++..+-||.+-..+............+.+.        +   ...+..+++.+.+..++..+..
T Consensus       694 ~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~--------g---~~~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          694 RGLPTRSLAWGPWAEHGMASTLREAEQDRLARS--------G---LLPISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             TTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHT--------T---BCCCCHHHHHHHHHHHHTSSCS
T ss_pred             cCCeEEEEECCeECcchhhccccHHHHHHHHhc--------C---CCCCCHHHHHHHHHHHHhCCCc
Confidence            389999999987754321110001111111111        1   2246778888888888887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	255
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-19
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	5e-16
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-12
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-12
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	4e-11
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-10
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-10
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-10
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-09
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-07
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	9e-06
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-05
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-05
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-05
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	1e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-04

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 82.9 bits (204), Expect = 3e-19
 Identities = 31/224 (13%), Positives = 68/224 (30%), Gaps = 20/224 (8%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHV 66
             N +  + +   A  +GV + + +S+  +Y   D     E   ++P+           +
Sbjct: 101 ETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160

Query: 67  QVEKYISENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHV 125
               Y      +    R     G   + +     F   ++    +P+ G G       H 
Sbjct: 161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT 220

Query: 126 RDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGID 185
            D    + L +    A    I+++     +T   +  +   + G     V       G D
Sbjct: 221 DDHCRGIALVLAGGRA--GEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHD 278

Query: 186 AKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                    + +  +    +  LG+R   +  + L      Y +
Sbjct: 279 ---------LRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE 313

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 5e-16
 Identities = 40/231 (17%), Positives = 69/231 (29%), Gaps = 30/231 (12%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD------------ 62
             N      +   AK  G +  L  S++ +Y   +  P  E      +            
Sbjct: 90  KTNTIGTLNMLGLAKRVGAR-LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGK 148

Query: 63  -AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEW---FFDRIVRKRPVPIPGSGMQ 118
                    Y+ +        R     G   + +       F  + ++  P+ + GSG Q
Sbjct: 149 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ 208

Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
                +V DL + L   + +     S+  NL +    T+   A+L     G   EI    
Sbjct: 209 TRAFQYVSDLVNGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLS 265

Query: 179 PKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                                + + AK +LGW     L E L +    + K
Sbjct: 266 EA----------QDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRK 306

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 64.8 bits (157), Expect = 1e-12
 Identities = 32/228 (14%), Positives = 61/228 (26%), Gaps = 23/228 (10%)

Query: 21  QRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD------------------ 62
           +   A         +F  IS+  +Y     P  VE  V  P                   
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKA 172

Query: 63  AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTN 121
           +    V  +                 G  +  +          +  +P+PI G G Q  +
Sbjct: 173 SSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRD 232

Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
             +V D +  L + V   +A     +N+          +           V       + 
Sbjct: 233 WLYVEDHARALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQ 290

Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
               A +  P  +  +  +       LGW+        +++  E Y+ 
Sbjct: 291 ITYVADR--PGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 62.5 bits (151), Expect = 5e-12
 Identities = 27/253 (10%), Positives = 67/253 (26%), Gaps = 40/253 (15%)

Query: 15  NNNFRLQRPVADWAKSSGVKQ---FLFISSAGIYKPADEPPHVEGDVVKPD--------A 63
           + +      + +  +  G+++   F   S++ +Y    E P  E     P          
Sbjct: 103 DVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 162

Query: 64  GHVQVEKYISENFSNWASFRPQYMIG-----SGNNKDCEEWFFDRIVRKRPVPIPGSGMQ 118
            +     Y         +             +   +       +           G+   
Sbjct: 163 AYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDS 222

Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
             +  H +D   M  + ++  +      F + +    ++    ++ A   G+ +      
Sbjct: 223 LRDWGHAKDYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTG 279

Query: 179 PKAAG---------------------IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP 217
            +  G                     +D +   P        +P  A + LGW+    L 
Sbjct: 280 VEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLR 339

Query: 218 EDLKERFEEYVKI 230
           E + E     ++ 
Sbjct: 340 EMVSEMVANDLEA 352

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.0 bits (144), Expect = 4e-11
 Identities = 30/228 (13%), Positives = 69/228 (30%), Gaps = 18/228 (7%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHV 66
             N      +   A+ + V+ F + +S+  Y      P VE  + KP            +
Sbjct: 116 ATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNEL 175

Query: 67  QVEKYISENFSNWASFRPQYMIGSGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTN 121
             + +      +    R   + G   + +         +   +++   V I G G    +
Sbjct: 176 YADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRD 235

Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
             ++ +      LA      A + ++N+      +L+ +               H +P  
Sbjct: 236 FCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV- 294

Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                +        H  A+   A  +LG+    ++   +      Y+ 
Sbjct: 295 ----YRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 57.2 bits (137), Expect = 3e-10
 Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 27/238 (11%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIY-----KPADEPPHVEGDVVKPD------- 62
             N  ++  +   A  + V + LF+ S+ IY     +P  E   ++G +   +       
Sbjct: 80  YQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK 139

Query: 63  -AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEE----------WFFDRIVRKRPVP 111
            AG    E Y  +   ++ S  P  + G  +N               +      +   V 
Sbjct: 140 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVV 199

Query: 112 IPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP 171
           + GSG       HV D+++     +E            +        G+     + A   
Sbjct: 200 VWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTI 259

Query: 172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
            ++V Y  +   +    + P        +       LGW    +L   L   ++ +++
Sbjct: 260 AKVVGYKGR---VVFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLE 313

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 3e-10
 Identities = 31/246 (12%), Positives = 67/246 (27%), Gaps = 30/246 (12%)

Query: 15  NNNFRLQRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPD--------A 63
           + +      + D  K+ G+    +F   S++ +Y    E P  E     P          
Sbjct: 104 DVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLY 163

Query: 64  GHVQVEKYISENFSNWASFRP-----QYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQ 118
            +  V  +         +             +   +          + +      G+   
Sbjct: 164 AYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDA 223

Query: 119 FTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYD 178
             +  H +D    + L ++N E      F + +    ++    +      G  +     +
Sbjct: 224 KRDWGHAKDYVEAMWLMLQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKN 280

Query: 179 PKAAG-----------IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY 227
               G           +D K   P        +   AK  L W+      E ++E     
Sbjct: 281 ENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD 340

Query: 228 VKIGRD 233
           V++ R 
Sbjct: 341 VELMRT 346

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.9 bits (136), Expect = 4e-10
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 29/247 (11%)

Query: 1   MEFNYAKFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAG-------IYKPADEPPH 53
               + +        NN  +   + + A+ +G+K+F + SSA        +         
Sbjct: 91  GGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKE 150

Query: 54  VEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV 105
            +    +P         A     + Y  +        R   + G                
Sbjct: 151 SDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAF 210

Query: 106 RKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP---EAASSNIFNLVSDRAVTLDGMAK 162
            ++          + +    R  + +           ++      N+ SD  V+++ MA+
Sbjct: 211 CRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE 270

Query: 163 LCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKE 222
           +        + I H+ P   G+  +           ++    K+ LGW     L E L+ 
Sbjct: 271 MVLSFEEKKLPI-HHIPGPEGVRGR----------NSDNNLIKEKLGWAPNMRLKEGLRI 319

Query: 223 RFEEYVK 229
            +    +
Sbjct: 320 TYFWIKE 326

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 54.6 bits (130), Expect = 3e-09
 Identities = 45/244 (18%), Positives = 90/244 (36%), Gaps = 39/244 (15%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV----------KPDAG 64
           +NN      +    +++ VK F+F SSA +Y    + P+VE              K    
Sbjct: 98  DNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVE 157

Query: 65  HVQVEKYISENFSNWASFRPQYMIG---SGNNKDCEEWFFDRIV---------RKRPVPI 112
            +  +   ++   + A  R    +G   SG+  +  +   + ++         R+  + I
Sbjct: 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAI 217

Query: 113 PGSGMQFTNIAHVRDLSSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKLCA 165
            G+     +   VRD   ++ LA  +             +I+NL +    ++  +    +
Sbjct: 218 FGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFS 277

Query: 166 QAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE 225
           +A G PV   H+ P+  G             ++A+   A   L WR T  L E  ++ + 
Sbjct: 278 KACGKPVNY-HFAPRREGDL---------PAYWADASKADRELNWRVTRTLDEMAQDTWH 327

Query: 226 EYVK 229
              +
Sbjct: 328 WQSR 331

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 26/229 (11%), Positives = 63/229 (27%), Gaps = 23/229 (10%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---------AGH 65
             +      + +  +    +   + +S        +    + +               GH
Sbjct: 97  VVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH 156

Query: 66  VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR-----KRPVPIPGSGMQFT 120
                Y      + +S             +         V      K+     G+     
Sbjct: 157 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR 216

Query: 121 NIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPK 180
           +     D    + L ++  +   ++ + + +    T+  M ++  +  GL          
Sbjct: 217 DWGFAGDYVEAMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLK--- 270

Query: 181 AAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
              ID     P         P  A+ +LGW+  T+L E ++   E  ++
Sbjct: 271 ---IDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR 316

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 45.9 bits (107), Expect = 2e-06
 Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 23/155 (14%)

Query: 88  IGSGNNKDCEEWFFDRIVRKRPVPIPGS------GMQFTNIAHVRDLSSMLTLAVENPEA 141
           + S    D      +     + +PI G+      G    +  HV DL+S   LA++  E 
Sbjct: 232 VMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEK 291

Query: 142 -------ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRN 194
                     ++FNL + R  ++  + ++  +  G P+ +     +              
Sbjct: 292 LGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDP---------- 341

Query: 195 MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
            +  A    A+++LGW+   +  E + E   ++ +
Sbjct: 342 AYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQR 376

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (102), Expect = 9e-06
 Identities = 40/252 (15%), Positives = 83/252 (32%), Gaps = 47/252 (18%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIY----KPADEPPHVEGDVVKP--------- 61
           +NN      + +  +   V +F+F SSA +Y    +  +  P  E   + P         
Sbjct: 99  HNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 158

Query: 62  ---------DAGHVQVEKYISENFSNWASFRPQYMIGSGN----NKDCEEWFFDRIVRKR 108
                         +  K+    + N     P  +IG       N          + R+ 
Sbjct: 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRRE 218

Query: 109 PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS-----------SNIFNLVSDRAVTL 157
            + I G      +   +RD   ++ LA  +  A                +NL S +  T+
Sbjct: 219 KLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTV 278

Query: 158 DGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLP 217
             +     +A+G+ +       +A  +          ++  A+P  AK  L W++   + 
Sbjct: 279 FEVYHAFCKASGIDLPYKVTGRRAGDV----------LNLTAKPDRAKRELKWQTELQVE 328

Query: 218 EDLKERFEEYVK 229
           +  K+ ++   +
Sbjct: 329 DSCKDLWKWTTE 340

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 13/169 (7%)

Query: 63  AGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTN 121
           A  + V+ ++                G   + +         I+      + G G    +
Sbjct: 165 ASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD 224

Query: 122 IAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKA 181
             H  D S+ +   +          + + +D       + +L  +  G P +   +    
Sbjct: 225 WIHTNDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR 282

Query: 182 AGIDAKKAFPFRNMHFYAEPRAAKDILGWRST-TNLPEDLKERFEEYVK 229
           AG D         + +  +    +D LGW    T+  E L+E  + Y  
Sbjct: 283 AGHD---------LRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTD 322

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 42.8 bits (99), Expect = 2e-05
 Identities = 22/162 (13%), Positives = 56/162 (34%), Gaps = 12/162 (7%)

Query: 71  YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
            +  + S +   +            C++    +    +P  I G+G Q  ++ H  D+ S
Sbjct: 187 VVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMIS 246

Query: 131 MLTLAVENPEAASSNIFN--LVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
           +   A+ N      N FN       +++L  + KL      + +   +   + +      
Sbjct: 247 LYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQR--- 303

Query: 189 AFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI 230
                   F A+ +   + + W    +  + +++ ++    I
Sbjct: 304 -------VFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI 338

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (99), Expect = 2e-05
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 26/177 (14%)

Query: 69  EKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIV---------RKRPVPIPGSGMQF 119
           +   + N      F P     SG   +  +   + ++         R+  + + G+    
Sbjct: 173 QADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT 232

Query: 120 TNIAHVRDLSSMLTLAVENP-------EAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPV 172
            +   VRD   ++ LA  +        E     I+NL +    ++  M +   +A+G  +
Sbjct: 233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292

Query: 173 EIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
                  +   +             YA P  A++ LGW +   L    ++ +    +
Sbjct: 293 PYKVVARREGDV----------AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQ 339

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.0 bits (97), Expect = 4e-05
 Identities = 22/211 (10%), Positives = 54/211 (25%), Gaps = 22/211 (10%)

Query: 38  FISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIG 89
           + + +     +  PP  E     P         A H     Y         +        
Sbjct: 131 YQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHES 190

Query: 90  SGNNKDCEE-----WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS 144
               ++              V  +     G+     +     D    + L ++  +    
Sbjct: 191 PRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDY 250

Query: 145 NIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAA 204
            +           +    +          +         ID +   P    +   +   A
Sbjct: 251 VVAT---------EEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKA 301

Query: 205 KDILGWRSTTNLPEDLKERFEEYVKIGRDKK 235
           K++LGW+      + +K   +E +++ + +K
Sbjct: 302 KEVLGWKPQVGFEKLVKMMVDEDLELAKREK 332

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (92), Expect = 1e-04
 Identities = 20/166 (12%), Positives = 48/166 (28%), Gaps = 7/166 (4%)

Query: 71  YISENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS 130
            +   F+               +          +V   P+ +   G Q      +RD   
Sbjct: 171 TLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE 230

Query: 131 MLTLAVENPEAASSNIFNLVSDRA--VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKK 188
            L   +EN           + +     +++ + ++   +        H+ P A     + 
Sbjct: 231 ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES 290

Query: 189 AFPFRN-----MHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK 229
           +  +        H     R A   L W    ++ E + E  + +++
Sbjct: 291 SSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLR 336

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 7e-04
 Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 17/128 (13%)

Query: 15  NNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE 74
                  R +    K+ GV + +  +SA +     +P  V   +      H+++ K + E
Sbjct: 85  TVMSEGARNIVAAMKAHGVDKVVACTSAFLL---WDPTKVPPRLQAVTDDHIRMHKVLRE 141

Query: 75  NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL 134
           +   + +  P                 D+        +   G   + +    DL   +  
Sbjct: 142 SGLKYVAVMPP-------------HIGDQ-PLTGAYTVTLDGRGPSRVISKHDLGHFMLR 187

Query: 135 AVENPEAA 142
            +   E  
Sbjct: 188 CLTTDEYD 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.98
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.97
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.97
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.97
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.96
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.96
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.95
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.94
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.93
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.92
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.91
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.89
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.87
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.78
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.66
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.62
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.42
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.37
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.3
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.29
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.17
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.09
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.01
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.97
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.93
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.8
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.79
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.75
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.7
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.61
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.58
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.57
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.54
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.52
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.5
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.49
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.49
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.36
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.35
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.34
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.3
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.26
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.15
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.14
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.09
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	95.98
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	95.95
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.91
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.89
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	95.89
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	95.87
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	95.86
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.84
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.54
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	95.29
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.24
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.01
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	94.89
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.4
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.29
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	94.29
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	94.15
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	93.99
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.94
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	93.65
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	93.53
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	93.22
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	93.1
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	93.08
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	93.03
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	92.45
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	92.06
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.66
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	88.5
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	86.71
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	84.98
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	83.46
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	82.76
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	82.6

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.2e-36  Score=249.17  Aligned_cols=202  Identities=15%  Similarity=0.217  Sum_probs=176.9

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++|++.++++|||+||.++||.....+.+|+++..|. +.|+.+|...|         ++++++++||++|
T Consensus       103 N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v  181 (322)
T d1r6da_         103 NVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN-SPYAASKAGSDLVARAYHRTYGLDVRITRCCNN  181 (322)
T ss_dssp             HTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             hHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeE
Confidence            4999999999999999999999999999999888899999998875 77887776654         2899999999999


Q ss_pred             cCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHH
Q 025270           88 IGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQ  166 (255)
Q Consensus        88 ~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~  166 (255)
                      |||++... +++.++.++..|+++.++++|.+.++|+|++|+|+++..+++++..  +++||+++++.+++.|+++.+.+
T Consensus       182 yGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~--~~~~ni~~~~~~s~~e~~~~i~~  259 (322)
T d1r6da_         182 YGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA--GEIYHIGGGLELTNRELTGILLD  259 (322)
T ss_dssp             ECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHH
T ss_pred             ECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC--CCeeEEeecccchhHHHHHHHHH
Confidence            99987654 7888999999999999999999999999999999999999998775  68999999999999999999999


Q ss_pred             HhCCCCeeeec-CCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          167 AAGLPVEIVHY-DPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       167 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      .+|.+.+.... +.....          ...+.+|++|+++.|||+|.+++++||+++++|++++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n~  315 (322)
T d1r6da_         260 SLGADWSSVRKVADRKGH----------DLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENR  315 (322)
T ss_dssp             HHTCCGGGEEEECCCTTC----------CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCH
T ss_pred             HhCCCccceeecCCCCCC----------CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhH
Confidence            99988665432 222221          25577899999999999999999999999999999854

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=237.68  Aligned_cols=200  Identities=21%  Similarity=0.213  Sum_probs=169.4

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCC-----CCCCCCChhHHHHHHHh---------hCCceEEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGHVQVEKYISE---------NFSNWASF   82 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~~y~~ek~~~e---------~~~~~~il   82 (255)
                      |+.++.+|+++|++.++ |+||+||++||+.....|.+|+.     +..| .+.|+.+|.+.|         ++++++++
T Consensus        92 Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~l  169 (312)
T d2b69a1          92 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP-RACYDEGKRVAETMCYAYMKQEGVEVRVA  169 (312)
T ss_dssp             HHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST-THHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred             HHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCC-ccHHHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence            38999999999999887 79999999999987666666654     3333 356776666554         28999999


Q ss_pred             ecCcccCCCCCCC---cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           83 RPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        83 Rp~~v~G~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      ||++||||+....   +++.++.++..|+++.++++|.+.++|+|++|+++++..+++...   +++||++++..+++.+
T Consensus       170 R~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~---~~~~n~~~~~~~~~~~  246 (312)
T d2b69a1         170 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV---SSPVNLGNPEEHTILE  246 (312)
T ss_dssp             EECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC---CSCEEESCCCEEEHHH
T ss_pred             EeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc---CCceEecCCcccchhh
Confidence            9999999986543   678899999999999999999999999999999999999998664   4889999999999999


Q ss_pred             HHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHhc
Q 025270          160 MAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKIG  231 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  231 (255)
                      +++.+++.+|.+.++...+......          .....|++|++++|||+|.++++++|+++++||+++-
T Consensus       247 ~~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~  308 (312)
T d2b69a1         247 FAQLIKNLVGSGSEIQFLSEAQDDP----------QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL  308 (312)
T ss_dssp             HHHHHHHHHTCCCCEEEECCCTTCC----------CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCceEECCCCCCCC----------CeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999999999988887665543322          4567899999999999999999999999999998763

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=6.1e-34  Score=236.21  Aligned_cols=213  Identities=16%  Similarity=0.156  Sum_probs=174.8

Q ss_pred             eEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceE
Q 025270           10 ALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWA   80 (255)
Q Consensus        10 ~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~   80 (255)
                      ..++.|  +.|+.+|+++|+++++++|||+||.++||.....|.+|+++..|. +.|+.+|++.|.         +++++
T Consensus       113 ~~~~~N--v~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~i~~~  189 (341)
T d1sb8a_         113 TSNATN--IDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL-SPYAVTKYVNELYADVFSRCYGFSTI  189 (341)
T ss_dssp             HHHHHH--THHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_pred             chhhee--ehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCC-CcchHHHHHHHHHHHHHHHHhCCCeE
Confidence            344445  999999999999999999999999999998888899999998875 788888776653         79999


Q ss_pred             EEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCcc
Q 025270           81 SFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  155 (255)
Q Consensus        81 ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~  155 (255)
                      ++||++|||++..+.     .+..++..++.|.++.++++|.+.++|+|++|+|+++..++..+....+++||++++..+
T Consensus       190 ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         190 GLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRT  269 (341)
T ss_dssp             EEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCE
T ss_pred             EEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeecccccc
Confidence            999999999875543     567888999999999999999999999999999999999998776544589999999999


Q ss_pred             CHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          156 TLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      |++|+++.+.+.+|.+...........     ...+........|++|+++.|||+|.++++++|+++++||++.
T Consensus       270 si~~i~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~~  339 (341)
T d1sb8a_         270 SLNQLFFALRDGLAENGVSYHREPVYR-----DFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  339 (341)
T ss_dssp             EHHHHHHHHHHHHHHTTCCCCCCCEEE-----CCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhcccccccccccccc-----CCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHh
Confidence            999999999999885432211111100     0111122456789999999999999999999999999999874

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-32  Score=228.68  Aligned_cols=216  Identities=13%  Similarity=0.134  Sum_probs=164.6

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCc---ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v---~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------   75 (255)
                      ++..++.|  +.||.||+++|++.++   +||||+||++|||.....|++|+++..|. +.|+.+|++.|.         
T Consensus        98 ~~~~~~~N--v~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~-~~Y~~sK~~~E~~~~~~~~~~  174 (357)
T d1db3a_          98 PEYTADVD--AMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPYAVAKLYAYWITVNYRESY  174 (357)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--HHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHh
Confidence            33344445  9999999999998765   47999999999998777899999988864 788888876652         


Q ss_pred             CCceEEEecCcccCCCCCCCc----HHHHHHHHHcCCC-eeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEec
Q 025270           76 FSNWASFRPQYMIGSGNNKDC----EEWFFDRIVRKRP-VPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLV  150 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~  150 (255)
                      +++++++||++||||+.....    +...+..+..+.. ...+|++.+.++|+|++|+|+++..++++..   +++||++
T Consensus       175 ~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~~---~~~yni~  251 (357)
T d1db3a_         175 GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ---PEDFVIA  251 (357)
T ss_dssp             CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS---CCCEEEC
T ss_pred             CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCCC---CCeEEEC
Confidence            899999999999999765542    3344445555554 4566889999999999999999999998754   4899999


Q ss_pred             CCCccCHHHHHHHHHHHhCCCCeeeecCCCccc---------------------ccccccCCcCCCceeeCHHHHHHhcC
Q 025270          151 SDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAG---------------------IDAKKAFPFRNMHFYAEPRAAKDILG  209 (255)
Q Consensus       151 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~d~~k~~~~lG  209 (255)
                      +++.+|++|+++.+.+.+|...++...+.....                     .......+.+.....+|++|++++||
T Consensus       252 sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LG  331 (357)
T d1db3a_         252 TGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLG  331 (357)
T ss_dssp             CCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHC
T ss_pred             CCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHHHC
Confidence            999999999999999999975544322111100                     00111123334556789999999999


Q ss_pred             CCccCChHHHHHHHHHHHHH
Q 025270          210 WRSTTNLPEDLKERFEEYVK  229 (255)
Q Consensus       210 ~~p~~~~~~~i~~~~~~~~~  229 (255)
                      |+|+++++++|+++++++.+
T Consensus       332 w~P~~sl~egI~~~I~~~l~  351 (357)
T d1db3a_         332 WKPEITLREMVSEMVANDLE  351 (357)
T ss_dssp             CCCCSCHHHHHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHH
Confidence            99999999999999865433

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.98  E-value=2.9e-32  Score=227.68  Aligned_cols=210  Identities=15%  Similarity=0.134  Sum_probs=164.2

Q ss_pred             CcccHHHHHHHHhhCC---------cceEEEeccccccCCCCCCCC----------CCCCCCCCCCChhHHHHHHHhh--
Q 025270           17 NFRLQRPVADWAKSSG---------VKQFLFISSAGIYKPADEPPH----------VEGDVVKPDAGHVQVEKYISEN--   75 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~---------v~r~i~~Ss~~vy~~~~~~~~----------~E~~~~~~~~~~y~~ek~~~e~--   75 (255)
                      |+.++.+++++|++.+         +++|||+||..+||.....+.          .|.++..| .+.|+.+|++.|.  
T Consensus       100 N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p-~s~Yg~sK~~~E~~~  178 (361)
T d1kewa_         100 NIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAP-SSPYSASKASSDHLV  178 (361)
T ss_dssp             HTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCC-CSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCC-CCHHHHHHHHHHHHH
Confidence            4899999999998764         458999999999986543222          23334443 4778877766553  


Q ss_pred             -------CCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEE
Q 025270           76 -------FSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIF  147 (255)
Q Consensus        76 -------~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~  147 (255)
                             +++++++||++||||+.... .++.++.++..|+++.++++|.+.++|+|++|+|+++..++++...  +++|
T Consensus       179 ~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~--~~~~  256 (361)
T d1kewa_         179 RAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA--GETY  256 (361)
T ss_dssp             HHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--TCEE
T ss_pred             HHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCC--CCeE
Confidence                   89999999999999987654 6789999999999999999999999999999999999999998765  5899


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      |+++++.+++.|+++.+.+.++...+......  .........+.....+.+|++|+++.|||+|.++++++|+++++||
T Consensus       257 Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~  334 (361)
T d1kewa_         257 NIGGHNEKKNLDVVFTICDLLDEIVPKATSYR--EQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWY  334 (361)
T ss_dssp             EECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG--GGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHH
T ss_pred             EECCCCCcchHHHHhHhhhhcccccccccCcc--cceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999988765433211110  0011111122233567889999999999999999999999999999


Q ss_pred             HHhc
Q 025270          228 VKIG  231 (255)
Q Consensus       228 ~~~~  231 (255)
                      +++.
T Consensus       335 ~~n~  338 (361)
T d1kewa_         335 LANT  338 (361)
T ss_dssp             HHCH
T ss_pred             HHhH
Confidence            8874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.9e-30  Score=216.69  Aligned_cols=199  Identities=17%  Similarity=0.164  Sum_probs=162.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCC-------CCCCCCCChhHHHHHHHhh---------CCceE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG-------DVVKPDAGHVQVEKYISEN---------FSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~-------~~~~~~~~~y~~ek~~~e~---------~~~~~   80 (255)
                      |+.++.+++++|++.+++|||++||..+|+.....+..|.       .+..| .+.|+.+|+..|.         +++++
T Consensus       107 n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p-~~~Yg~sK~~~E~~~~~~~~~~gl~~~  185 (363)
T d2c5aa1         107 NTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEP-QDAFGLEKLATEELCKHYNKDFGIECR  185 (363)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCC-SSHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred             ccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCC-CCHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence            4899999999999999999999999999986554444333       33344 3677777765542         89999


Q ss_pred             EEecCcccCCCCCCC------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCc
Q 025270           81 SFRPQYMIGSGNNKD------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRA  154 (255)
Q Consensus        81 ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~  154 (255)
                      ++||+++||+++...      ....+............+++|.+.++|+|++|+++++..+++...   +++||++++..
T Consensus       186 ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~~---~~~~ni~~~~~  262 (363)
T d2c5aa1         186 IGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEM  262 (363)
T ss_dssp             EEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSSC---CSCEEECCCCC
T ss_pred             EEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCCC---CCeEEEecCCc
Confidence            999999999876543      223344445556667888999999999999999999999998654   58999999999


Q ss_pred             cCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          155 VTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       155 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      +|+.|+++.+.+.+|.+.++...+.+...           ....+|++|+++.|||+|.++++++|+++++||+++
T Consensus       263 ~s~~~l~~~i~~~~g~~~~i~~~~~~~~~-----------~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~  327 (363)
T d2c5aa1         263 VSMNEMAEMVLSFEEKKLPIHHIPGPEGV-----------RGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ  327 (363)
T ss_dssp             EEHHHHHHHHHHTTTCCCCEEEECCCCCC-----------SBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCCCceEeCCCCCCc-----------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999998888776654332           456789999999999999999999999999999776

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.8e-30  Score=214.89  Aligned_cols=205  Identities=20%  Similarity=0.249  Sum_probs=162.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh----------CCceEEEecCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQY   86 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~----------~~~~~ilRp~~   86 (255)
                      |+.|+.+|+++|++.++++||++||.++|+.....+..|+.+...+.+.|+.+|+..|.          +++++++|+++
T Consensus       100 Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~  179 (338)
T d1udca_         100 NVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN  179 (338)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeecc
Confidence            49999999999999999999999999999877666666666554445778777765542          78999999999


Q ss_pred             ccCCCCCC-----------CcHHHHHHHHHcC-CCeeccCC------CCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           87 MIGSGNNK-----------DCEEWFFDRIVRK-RPVPIPGS------GMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        87 v~G~~~~~-----------~~~~~~~~~~~~~-~~~~i~~~------~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                      +||++...           .+++.++..+..+ .++.++|+      |.+.++|+|++|++.++..++..... ..+++|
T Consensus       180 v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~  259 (338)
T d1udca_         180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIY  259 (338)
T ss_dssp             EECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             EEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCccee
Confidence            99986432           1445555555543 34666554      67789999999999888876663322 124799


Q ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          148 NLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       148 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      |+++++.+|+.|+++.+.+.+|.+.++...+......          ....+|++|+++.|||+|.++++++|+++++|+
T Consensus       260 Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~----------~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~  329 (338)
T d1udca_         260 NLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDL----------PAYWADASKADRELNWRVTRTLDEMAQDTWHWQ  329 (338)
T ss_dssp             EESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCC----------SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred             eecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCC----------CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            9999999999999999999999988887766543322          556789999999999999999999999999999


Q ss_pred             HHhc
Q 025270          228 VKIG  231 (255)
Q Consensus       228 ~~~~  231 (255)
                      +++.
T Consensus       330 ~~~~  333 (338)
T d1udca_         330 SRHP  333 (338)
T ss_dssp             HHCT
T ss_pred             Hhch
Confidence            9874

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=6.5e-30  Score=209.87  Aligned_cols=207  Identities=14%  Similarity=0.074  Sum_probs=163.6

Q ss_pred             EEecccCcccHHHHHHHHhhCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceE
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWA   80 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~   80 (255)
                      .+..|  +.|+.+++++|++.++ ++|+++||..+|+.....+.+|+++..|. +.|+.+|...|.         +++++
T Consensus        95 ~~~~n--~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~  171 (321)
T d1rpna_          95 TGVVD--GLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR-SPYGVAKLYGHWITVNYRESFGLHAS  171 (321)
T ss_dssp             HHHHH--THHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred             HHhhh--hhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc-ChhHHHHHHHHHHHHHHHhhcCCcEE
Confidence            34445  9999999999999875 57999999999988877788899888765 778877766543         89999


Q ss_pred             EEecCcccCCCCCCCc----HHHHHHHHHcCC-CeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCcc
Q 025270           81 SFRPQYMIGSGNNKDC----EEWFFDRIVRKR-PVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAV  155 (255)
Q Consensus        81 ilRp~~v~G~~~~~~~----~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~  155 (255)
                      ++||+++|||......    +..++.++..+. +....|+|++.++|+|++|+|+++..+++++..   +.||+++++..
T Consensus       172 ~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~---~~~ni~~~~~~  248 (321)
T d1rpna_         172 SGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA---DDYVVATGVTT  248 (321)
T ss_dssp             EEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC---CCEEECCSCEE
T ss_pred             EEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc---CCceecccccc
Confidence            9999999999755542    233445555554 445678999999999999999999999998763   78999999999


Q ss_pred             CHHHHHHHHHHHhCCCCeee-ecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          156 TLDGMAKLCAQAAGLPVEIV-HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       156 s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      |+.++++.+.+.+|.+.+.. ...+...       .+.....+..|++|++++|||+|+++++++|+++++|+.+.
T Consensus       249 s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~~  317 (321)
T d1rpna_         249 TVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR  317 (321)
T ss_dssp             EHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             eehhhhHHHHHHhCCCccceeecCCCCC-------CCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence            99999999999999875432 2221111       12223556789999999999999999999999999998764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.97  E-value=7.5e-30  Score=211.78  Aligned_cols=208  Identities=15%  Similarity=0.177  Sum_probs=166.3

Q ss_pred             cceEEecccCcccHHHHHHHHhhCCcceEEEeccccccCCC------------CCCCCCCCCCCCCCCChhHHHHHHHh-
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPA------------DEPPHVEGDVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~------------~~~~~~E~~~~~~~~~~y~~ek~~~e-   74 (255)
                      ++..++.|  +.|+.+++++|...+. ++|++||+++||..            ......|+++..|. +.|+.+|+..| 
T Consensus        93 ~~~~~~~N--~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-s~Y~~sK~~~E~  168 (346)
T d1oc2a_          93 PSPFIHTN--FIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-SPYSSTKAASDL  168 (346)
T ss_dssp             CHHHHHHH--THHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC-SHHHHHHHHHHH
T ss_pred             cccceeee--hHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCC-CHHHHHHHHHHH
Confidence            34455556  9999999999999886 79999999999742            11234555555554 66776666544 


Q ss_pred             --------hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                              .+++++++||++||||+.... .+..++..+..|.++.++++|.+.++|+|++|+|++++.+++++..  ++
T Consensus       169 ~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~--~~  246 (346)
T d1oc2a_         169 IVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM--GE  246 (346)
T ss_dssp             HHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT--TC
T ss_pred             HHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhccc--Cc
Confidence                    389999999999999876543 6777888888999889999999999999999999999999998766  68


Q ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCe-eeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccC-ChHHHHHHH
Q 025270          146 IFNLVSDRAVTLDGMAKLCAQAAGLPVE-IVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTT-NLPEDLKER  223 (255)
Q Consensus       146 ~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~i~~~  223 (255)
                      .||+++++..++.++++.+.+.+|.+.. +...+.....          ...+.+|++|+++.|||.|++ +|++||+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~t  316 (346)
T d1oc2a_         247 TYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGH----------DLRYAIDASKLRDELGWTPQFTDFSEGLEET  316 (346)
T ss_dssp             EEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTC----------CCBCCBCCHHHHHHHCCCCSCCCHHHHHHHH
T ss_pred             cccccccccccchHHHHHHHHHhCCCCcceEECCCCCCC----------CceeeeCHHHHHHHHCCCCcCCCHHHHHHHH
Confidence            9999999999999999999999987543 3333322221          144568999999999999987 699999999


Q ss_pred             HHHHHHhc
Q 025270          224 FEEYVKIG  231 (255)
Q Consensus       224 ~~~~~~~~  231 (255)
                      ++|++++.
T Consensus       317 i~w~~~n~  324 (346)
T d1oc2a_         317 IQWYTDNQ  324 (346)
T ss_dssp             HHHHHHTH
T ss_pred             HHHHHHHH
Confidence            99999864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.1e-28  Score=202.06  Aligned_cols=203  Identities=18%  Similarity=0.279  Sum_probs=162.7

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCC----CCCChhHHHHHHHh---------hCCceEEEe
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAGHVQVEKYISE---------NFSNWASFR   83 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~----~~~~~y~~ek~~~e---------~~~~~~ilR   83 (255)
                      |+.++.+|+++|++++++||||+||.+|||.....+++|+.+..    ++.+.|+.+|+..|         .+++++++|
T Consensus        82 Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR  161 (315)
T d1e6ua_          82 NMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVM  161 (315)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence            49999999999999999999999999999987777788876542    22245776666554         289999999


Q ss_pred             cCcccCCCCCCC-----cH-----HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-------CCCCE
Q 025270           84 PQYMIGSGNNKD-----CE-----EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-------ASSNI  146 (255)
Q Consensus        84 p~~v~G~~~~~~-----~~-----~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-------~~~~~  146 (255)
                      |++||||+....     ..     ..+......+..+.+.++|.+.++|+|++|+++++..+++....       .....
T Consensus       162 ~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (315)
T d1e6ua_         162 PTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSH  241 (315)
T ss_dssp             ECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCC
T ss_pred             eccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccc
Confidence            999999976543     11     22334455677788889999999999999999999999876532       12368


Q ss_pred             EEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHH
Q 025270          147 FNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEE  226 (255)
Q Consensus       147 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~  226 (255)
                      ++++.+...++.++++.+.+.+|.+..+...+....+.          ....+|++|++ +|||.|.++++++|+++++|
T Consensus       242 ~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~----------~~~~~d~sk~k-~Lg~~p~~~l~e~i~~ti~w  310 (315)
T d1e6ua_         242 INVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGT----------PRKLLDVTRLH-QLGWYHEISLEAGLASTYQW  310 (315)
T ss_dssp             EEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCC----------SBCCBCCHHHH-HTTCCCCCCHHHHHHHHHHH
T ss_pred             cccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCC----------ceeccCHHHHH-HcCCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999998887665443332          44568999997 59999999999999999999


Q ss_pred             HHHh
Q 025270          227 YVKI  230 (255)
Q Consensus       227 ~~~~  230 (255)
                      |+++
T Consensus       311 ~~~N  314 (315)
T d1e6ua_         311 FLEN  314 (315)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            9875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-29  Score=206.98  Aligned_cols=209  Identities=14%  Similarity=0.091  Sum_probs=164.1

Q ss_pred             CcccHHHHHHHHhhCCc---ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceEEEec
Q 025270           17 NFRLQRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRP   84 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v---~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~ilRp   84 (255)
                      |+.||.+++++|+++++   ++|||+||.+|||.....+++|+++..|. +.|+.+|++.|.         +++++++||
T Consensus       106 Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~-~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~  184 (347)
T d1t2aa_         106 DGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR-SPYGAAKLYAYWIVVNFREAYNLFAVNGIL  184 (347)
T ss_dssp             HTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence            39999999999999875   48999999999998777889999998864 778877776653         899999999


Q ss_pred             CcccCCCCCCCc-----HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHH
Q 025270           85 QYMIGSGNNKDC-----EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDG  159 (255)
Q Consensus        85 ~~v~G~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e  159 (255)
                      +++|||......     ...++..+..+.++..+|+|.+.++|+|++|+++++..++++...   +.|+++.+...++++
T Consensus       185 ~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~  261 (347)
T d1t2aa_         185 FNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP---EDFVIATGEVHSVRE  261 (347)
T ss_dssp             CCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSC---CCEEECCSCCEEHHH
T ss_pred             cceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCCC---ccceeccccccccch
Confidence            999999755542     223444455567778889999999999999999999999998764   678899888999999


Q ss_pred             HHHHHHHHhCCCCeeeecCCCccc-----------ccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          160 MAKLCAQAAGLPVEIVHYDPKAAG-----------IDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       160 l~~~i~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      ..+.+...+|........+.....           .......+.....+.+|++|++++|||+|+++|+++|++++++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~  341 (347)
T d1t2aa_         262 FVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV  341 (347)
T ss_dssp             HHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            999999999986544332221110           011122333445677899999999999999999999999987654


Q ss_pred             H
Q 025270          229 K  229 (255)
Q Consensus       229 ~  229 (255)
                      +
T Consensus       342 ~  342 (347)
T d1t2aa_         342 E  342 (347)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.1e-29  Score=206.92  Aligned_cols=216  Identities=15%  Similarity=0.172  Sum_probs=165.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCC------CCCCCChhHHHHHHHhh---------CCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV------VKPDAGHVQVEKYISEN---------FSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~------~~~~~~~y~~ek~~~e~---------~~~~~i   81 (255)
                      |+.++.+++++|.+.++ +++++||+.+|+........|...      ...+.+.|+.+|.+.|.         ++++++
T Consensus        94 nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i  172 (342)
T d2blla1          94 DFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL  172 (342)
T ss_dssp             HTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             ccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhcccCceeEE
Confidence            49999999999999987 578899999998765544444332      22233567777766553         899999


Q ss_pred             EecCcccCCCCCCC---------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecC
Q 025270           82 FRPQYMIGSGNNKD---------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVS  151 (255)
Q Consensus        82 lRp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~  151 (255)
                      +|++.+||+.....         ....++.+++.|+++.++++|.+.++|+|++|+|+++..+++++.. ..|++||+++
T Consensus       173 ~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~  252 (342)
T d2blla1         173 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN  252 (342)
T ss_dssp             EEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             eeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEec
Confidence            99999999864332         4677889999999999999999999999999999999999997643 3368999987


Q ss_pred             CC-ccCHHHHHHHHHHHhCCCCeeeecCCCcccccc-----cccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHH
Q 025270          152 DR-AVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDA-----KKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFE  225 (255)
Q Consensus       152 ~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~  225 (255)
                      ++ .+|++|+++.+.+.+|........++.......     .........+..+|++|++++|||+|.++++++|+++++
T Consensus       253 ~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~  332 (342)
T d2blla1         253 PENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLD  332 (342)
T ss_dssp             TTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHHCCCcCCCHHHHHHHHHH
Confidence            65 589999999999999987666555443321100     000111124556799999999999999999999999999


Q ss_pred             HHHHhccc
Q 025270          226 EYVKIGRD  233 (255)
Q Consensus       226 ~~~~~~~~  233 (255)
                      ||+++..+
T Consensus       333 ~y~~~~~~  340 (342)
T d2blla1         333 FFLRTVDL  340 (342)
T ss_dssp             HHHHHSCT
T ss_pred             HHHhCcCC
Confidence            99988643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.1e-29  Score=205.46  Aligned_cols=209  Identities=19%  Similarity=0.229  Sum_probs=160.8

Q ss_pred             EEecccCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------hCCceE
Q 025270           11 LFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWA   80 (255)
Q Consensus        11 ~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------~~~~~~   80 (255)
                      .++.|  +.++.+++++|++.++++|||+||+.+|+........+..+...+.+.|+..|+..|          .+++.+
T Consensus       104 ~~~~N--v~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~  181 (346)
T d1ek6a_         104 YYRVN--LTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV  181 (346)
T ss_dssp             HHHHH--HHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHhh--hcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhccCCceE
Confidence            34445  999999999999999999999999999988665444444444444577887776544          278999


Q ss_pred             EEecCcccCCCCCC-----------CcHHHHHHHHHc-CCCeeccC------CCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           81 SFRPQYMIGSGNNK-----------DCEEWFFDRIVR-KRPVPIPG------SGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        81 ilRp~~v~G~~~~~-----------~~~~~~~~~~~~-~~~~~i~~------~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                      ++||+.+||+....           ..++.++..+.. +.++.+++      +|.+.++|+|++|+|.++..++..... 
T Consensus       182 ~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~  261 (346)
T d1ek6a_         182 LLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ  261 (346)
T ss_dssp             EEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTT
T ss_pred             EEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccc
Confidence            99999999986432           134444444443 44455543      467789999999999999887654332 


Q ss_pred             CCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHH
Q 025270          142 ASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLK  221 (255)
Q Consensus       142 ~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~  221 (255)
                      ..+++||+++++.+++.|+++.+.+.+|.+.++...+.....          .....+|++|+++.|||+|.++++++|+
T Consensus       262 ~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e----------~~~~~~d~~k~~~~lgw~p~~slee~I~  331 (346)
T d1ek6a_         262 CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGD----------VAACYANPSLAQEELGWTAALGLDRMCE  331 (346)
T ss_dssp             CCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTC----------CSEECBCCHHHHHTTCCCCCCCHHHHHH
T ss_pred             cCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCC----------CCEeeECHHHHHHHHCCCcCCCHHHHHH
Confidence            224799999999999999999999999998888766654432          2556789999999999999999999999


Q ss_pred             HHHHHHHHhc
Q 025270          222 ERFEEYVKIG  231 (255)
Q Consensus       222 ~~~~~~~~~~  231 (255)
                      ++++|++++.
T Consensus       332 ~~i~w~~~n~  341 (346)
T d1ek6a_         332 DLWRWQKQNP  341 (346)
T ss_dssp             HHHHHHHHCT
T ss_pred             HHHHHHHhCH
Confidence            9999999764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=4.1e-27  Score=195.24  Aligned_cols=204  Identities=21%  Similarity=0.225  Sum_probs=151.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCC----CCCCCCCCCCCCCCChhHHHHHHHhh-----------CCceEE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWAS   81 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~----~~~~~E~~~~~~~~~~y~~ek~~~e~-----------~~~~~i   81 (255)
                      |+.++.+++++|++.+++|||++||..|||...    ..+.+|+.+..|. +.|+.+|...|.           ++++++
T Consensus       101 N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~  179 (347)
T d1z45a2         101 NILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-NPYGHTKYAIENILNDLYNSDKKSWKFAI  179 (347)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred             chhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC-ChhHhHHHHHHHHHHHHHHhhccCCcEEE
Confidence            599999999999999999999999999998643    3457777777654 778877766542           688999


Q ss_pred             EecCcccCCCCCC-----------CcHHHHHHHHHc-CCCeeccCCC------CcceeeeeHHHHHHHHHHHhcCCC---
Q 025270           82 FRPQYMIGSGNNK-----------DCEEWFFDRIVR-KRPVPIPGSG------MQFTNIAHVRDLSSMLTLAVENPE---  140 (255)
Q Consensus        82 lRp~~v~G~~~~~-----------~~~~~~~~~~~~-~~~~~i~~~~------~~~~~~i~v~D~a~~~~~~l~~~~---  140 (255)
                      +||+++||+....           ..++.++..+.. +.++.++|++      ...++++++.|++.++..+++...   
T Consensus       180 lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  259 (347)
T d1z45a2         180 LRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYN  259 (347)
T ss_dssp             EEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSC
T ss_pred             EeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeeccccccccccccccccc
Confidence            9999999975322           133444444332 4456666654      445788888889988888776321   


Q ss_pred             --cCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHH
Q 025270          141 --AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPE  218 (255)
Q Consensus       141 --~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~  218 (255)
                        ...+++||+++++++|+.|+++.+.+.+|.+.++...+.....          .....+|++|++++|||+|.+++++
T Consensus       260 ~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~d~sk~~~~lGw~p~~~lee  329 (347)
T d1z45a2         260 ENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGD----------VLNLTAKPDRAKRELKWQTELQVED  329 (347)
T ss_dssp             TTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------------------CCCCCBCCHHHHHHTCCCCCCCHHH
T ss_pred             ccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCC----------CCEeeECHHHHHHHHCCCCCCCHHH
Confidence              1124799999999999999999999999998777654433222          2456789999999999999999999


Q ss_pred             HHHHHHHHHHHhc
Q 025270          219 DLKERFEEYVKIG  231 (255)
Q Consensus       219 ~i~~~~~~~~~~~  231 (255)
                      +|+++++|++++.
T Consensus       330 ~i~~ti~w~~~np  342 (347)
T d1z45a2         330 SCKDLWKWTTENP  342 (347)
T ss_dssp             HHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHhCh
Confidence            9999999999873

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.94  E-value=4.7e-26  Score=191.21  Aligned_cols=203  Identities=20%  Similarity=0.254  Sum_probs=156.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCC-------CCCCCCCCCCCCCChhHHHHHHHh---------hCCceE
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADE-------PPHVEGDVVKPDAGHVQVEKYISE---------NFSNWA   80 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~-------~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~   80 (255)
                      |+.++.+++++|++.++++++++||..+|+....       .+..|+++..|. +.|+.+|+..|         ++++++
T Consensus       120 N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~gl~~~  198 (383)
T d1gy8a_         120 NVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAYGIKGI  198 (383)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred             ccccccccchhhhccCCcccccccccccccccccccccccccccccccCCCCC-CHHHhhHhHHHHHHHHHHHHhCCCEE
Confidence            5999999999999999999999999999875432       345666666654 77887776544         389999


Q ss_pred             EEecCcccCCCCCCC----------cHHHHHHHHH----------------cCCCeeccC------CCCcceeeeeHHHH
Q 025270           81 SFRPQYMIGSGNNKD----------CEEWFFDRIV----------------RKRPVPIPG------SGMQFTNIAHVRDL  128 (255)
Q Consensus        81 ilRp~~v~G~~~~~~----------~~~~~~~~~~----------------~~~~~~i~~------~~~~~~~~i~v~D~  128 (255)
                      ++||+++|||+....          .++.++.++.                .+.++.++|      +|.+.++|+|++|+
T Consensus       199 ~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~  278 (383)
T d1gy8a_         199 CLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDL  278 (383)
T ss_dssp             EEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred             EEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHH
Confidence            999999999976542          2344444332                234444444      47888999999999


Q ss_pred             HHHHHHHhcCCC-------cCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCH
Q 025270          129 SSMLTLAVENPE-------AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEP  201 (255)
Q Consensus       129 a~~~~~~l~~~~-------~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  201 (255)
                      |+++..+++...       ...+++||+++++.+|+.|+++.+.+.+|.+.++...+.....          ......|+
T Consensus       279 ~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~d----------~~~~~~d~  348 (383)
T d1gy8a_         279 ASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGD----------PAYLVAAS  348 (383)
T ss_dssp             HHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCCTTC----------CSEECBCC
T ss_pred             HHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCCCCceEECCCCCCC----------cCEeeeCH
Confidence            999999986421       1224799999999999999999999999998888766544322          14567799


Q ss_pred             HHHHHhcCCCccCChHHHHHHHH-HHHHHh
Q 025270          202 RAAKDILGWRSTTNLPEDLKERF-EEYVKI  230 (255)
Q Consensus       202 ~k~~~~lG~~p~~~~~~~i~~~~-~~~~~~  230 (255)
                      +|++++|||+|.++++++|.++. .|++++
T Consensus       349 ~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         349 DKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             HHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            99999999999999999999984 676665

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=6.8e-26  Score=186.99  Aligned_cols=202  Identities=12%  Similarity=0.109  Sum_probs=154.3

Q ss_pred             CcccHHHHHHHHhhCC-----cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhh---------CCceEEE
Q 025270           17 NFRLQRPVADWAKSSG-----VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASF   82 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~-----v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~---------~~~~~il   82 (255)
                      |+.++.+++++|+..+     ..++++.||+.+|+... .+.+|+++..|. +.|+.+|+..|.         +++++++
T Consensus       106 n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~il  183 (339)
T d1n7ha_         106 VATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPR-SPYAASKCAAHWYTVNYREAYGLFACNG  183 (339)
T ss_dssp             HTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             cccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCc-chhhHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            4888999999998642     34688888888887654 468899888764 888888877663         8999999


Q ss_pred             ecCcccCCCCCCCcHH----HHHHHHHc-CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCH
Q 025270           83 RPQYMIGSGNNKDCEE----WFFDRIVR-KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTL  157 (255)
Q Consensus        83 Rp~~v~G~~~~~~~~~----~~~~~~~~-~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~  157 (255)
                      ||++||||........    ..+..... +....+.|++.+.++|+|++|+|+++..+++++..   ..+++..+...+.
T Consensus       184 R~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~---~~~~~~~~~~~s~  260 (339)
T d1n7ha_         184 ILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP---DDYVVATEEGHTV  260 (339)
T ss_dssp             EECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSC---CEEEECCSCEEEH
T ss_pred             EEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcCCC---Ccccccccccccc
Confidence            9999999976654322    22223333 34456678899999999999999999999998764   5677777888999


Q ss_pred             HHHHHHHHHHhCCCCeeee-cCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          158 DGMAKLCAQAAGLPVEIVH-YDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       158 ~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      .++++++.+.+|...+... .....       ..+.....+..|++|+++.|||+|+++|+++|+++++|+.+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~  327 (339)
T d1n7ha_         261 EEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  327 (339)
T ss_dssp             HHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhhhcccCceeeeccCC-------CCCCCCCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence            9999999999998654321 11111       112223556789999999999999999999999999998765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.93  E-value=1.6e-25  Score=184.39  Aligned_cols=202  Identities=16%  Similarity=0.240  Sum_probs=152.3

Q ss_pred             CcccHHHHHHHHhhCCcceEEEecccc-ccCCCCCCCC----------------CCCCCCCCCCChhHHHHHHHh-----
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAG-IYKPADEPPH----------------VEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~-vy~~~~~~~~----------------~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      |+.||.||+++|.+.+++++|+.||.+ +++.....+.                .+.++..+ .+.|+..|...+     
T Consensus        99 Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~k~~~e~~~~~  177 (338)
T d1orra_          99 NVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF-HSPYGCSKGAADQYMLD  177 (338)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC-CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc-ccccccccchhhhhhhh
Confidence            599999999999999987776666655 4443322221                12222222 255666655443     


Q ss_pred             ----hCCceEEEecCcccCCCCCCC----cHHHHHHHHHc-----CCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 ----NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVR-----KRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 ----~~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~-----~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                          ++...+++|++.+||+.....    .++.++..++.     +.++.++|+|.+.++|+|++|++++++.++++...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~  257 (338)
T d1orra_         178 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK  257 (338)
T ss_dssp             HHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH
T ss_pred             hhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcccc
Confidence                388999999999998654432    44556655543     67788999999999999999999999999987655


Q ss_pred             CCCCEEEecC--CCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHH
Q 025270          142 ASSNIFNLVS--DRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPED  219 (255)
Q Consensus       142 ~~~~~~~i~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~  219 (255)
                      ..+++|++..  +..+++.|+++.+.+.+|.+.++...+.....          ...+..|++|+++.|||+|.++++++
T Consensus       258 ~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~k~~~~Lg~~p~~sl~e~  327 (338)
T d1orra_         258 IRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESD----------QRVFVADIKKITNAIDWSPKVSAKDG  327 (338)
T ss_dssp             HTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSC----------CSEECBCCHHHHHHHCCCCCSCHHHH
T ss_pred             ccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCC----------cCeeeECHHHHHHHHCCCcCCCHHHH
Confidence            4468999854  45789999999999999998887766554332          14567799999999999999999999


Q ss_pred             HHHHHHHHHH
Q 025270          220 LKERFEEYVK  229 (255)
Q Consensus       220 i~~~~~~~~~  229 (255)
                      |+++++|++.
T Consensus       328 i~~ti~W~k~  337 (338)
T d1orra_         328 VQKMYDWTSS  337 (338)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHc
Confidence            9999999985

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=5.5e-25  Score=185.19  Aligned_cols=204  Identities=16%  Similarity=0.154  Sum_probs=152.8

Q ss_pred             CcccHHHHHHHHhhCCcc-eEEEeccccccCCCCCCCCCCC--------------CCCCCCCChhHHHHHHHhh------
Q 025270           17 NFRLQRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVEG--------------DVVKPDAGHVQVEKYISEN------   75 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~-r~i~~Ss~~vy~~~~~~~~~E~--------------~~~~~~~~~y~~ek~~~e~------   75 (255)
                      |+.|+.+++++|++.+++ +++++||..+|+.... +..|.              .+..| .+.|+.+|++.|.      
T Consensus       120 Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p-~~~Y~~sK~~aE~~~~~~~  197 (393)
T d1i24a_         120 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITHNGRTDTLPYPKQA-SSFYHLSKVHDSHNIAFTC  197 (393)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEETTEEEEEECCCCC-CSHHHHHHHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHhccccceeecccccccccccc-cccccccccccccccccccccccc-ccHHHHHhhhhcccccccc
Confidence            499999999999998764 6788888888876432 22111              12333 3678888776653      


Q ss_pred             ---CCceEEEecCcccCCCCCCC------------------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHH
Q 025270           76 ---FSNWASFRPQYMIGSGNNKD------------------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  134 (255)
Q Consensus        76 ---~~~~~ilRp~~v~G~~~~~~------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  134 (255)
                         +++++++||++|||++....                  .+..++.+...|+++.++|++.+.++|+|++|+|+++..
T Consensus       198 ~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~  277 (393)
T d1i24a_         198 KAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEI  277 (393)
T ss_dssp             HHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             cccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHH
Confidence               89999999999999875321                  357788889999999999999999999999999999999


Q ss_pred             HhcCCCcCCCCEEEe-cCCCccCHHHHHHHHHHHh---CCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCC
Q 025270          135 AVENPEAASSNIFNL-VSDRAVTLDGMAKLCAQAA---GLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGW  210 (255)
Q Consensus       135 ~l~~~~~~~~~~~~i-~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  210 (255)
                      ++++.... +..+.+ ++++.+|+.|+++.+.+..   |...+....+.+...        .....+..|++|+++ |||
T Consensus       278 ~~~~~~~~-g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d~~k~~~-LGw  347 (393)
T d1i24a_         278 AIANPAKA-GEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVE--------AEEHYYNAKHTKLME-LGL  347 (393)
T ss_dssp             HHHSCCCT-TCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCS--------CSSCCCCBCCCHHHH-TTC
T ss_pred             HHHhhccc-ceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcceeeccCCCCC--------CCccEecCCHHHHHH-cCC
Confidence            99987653 233222 3456789999999998875   545555444333221        122456778999985 999


Q ss_pred             CccCChHHHHHHHHHHHHHhcc
Q 025270          211 RSTTNLPEDLKERFEEYVKIGR  232 (255)
Q Consensus       211 ~p~~~~~~~i~~~~~~~~~~~~  232 (255)
                      +|.++++++|+++++|+++...
T Consensus       348 ~P~~~~~~~i~~~~~~~~~~k~  369 (393)
T d1i24a_         348 EPHYLSDSLLDSLLNFAVQFKD  369 (393)
T ss_dssp             CCCCCCHHHHHHHHHHHHHTGG
T ss_pred             ccccCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.92  E-value=6.2e-24  Score=170.49  Aligned_cols=197  Identities=16%  Similarity=0.142  Sum_probs=159.0

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChh-----HHHHHHHhhCCceEEEecCcccCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV-----QVEKYISENFSNWASFRPQYMIGSG   91 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y-----~~ek~~~e~~~~~~ilRp~~v~G~~   91 (255)
                      |...+.++++++...+. +++++||..+|+.....+.+|.++..+. ..|     ..++++.+.+.+++++||++|||++
T Consensus        79 n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~-~~~~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~  156 (281)
T d1vl0a_          79 NAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ-SAYGKTKLEGENFVKALNPKYYIVRTAWLYGDG  156 (281)
T ss_dssp             HTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC-SHHHHHHHHHHHHHHHHCSSEEEEEECSEESSS
T ss_pred             ccccccccccccccccc-cccccccceeeeccccccccccccccch-hhhhhhhhHHHHHHHHhCCCccccceeEEeCCC
Confidence            36677777787777664 6889999999998887888888887654 444     4666666779999999999999997


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCC
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  171 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  171 (255)
                      .+  +...++..+..+..+.+.+  ++.++++|++|+++++..++++...   ++||+++++.+|+.|+++.+++.+|.+
T Consensus       157 ~~--~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~---g~~~~~~~~~~s~~e~~~~i~~~~g~~  229 (281)
T d1vl0a_         157 NN--FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY---GTFHCTCKGICSWYDFAVEIFRLTGID  229 (281)
T ss_dssp             SC--HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC---EEEECCCBSCEEHHHHHHHHHHHHCCC
T ss_pred             cc--cccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc---CceeEeCCCccchHHHHHHHHHHhCCC
Confidence            54  5677888888888777664  5889999999999999999998764   799999999999999999999999999


Q ss_pred             CeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHH
Q 025270          172 VEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYV  228 (255)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~  228 (255)
                      .++..++....+...     .+..+..+|++|+++.|||+|+ +++++|++++++++
T Consensus       230 ~~i~~i~~~~~~~~a-----~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         230 VKVTPCTTEEFPRPA-----KRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             CEEEEECSTTSCCSS-----CCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             ceEEeccHHHcCCcC-----CCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence            998877654322110     0123445799999999999987 99999999999885

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.7e-24  Score=175.61  Aligned_cols=199  Identities=16%  Similarity=0.116  Sum_probs=133.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------hCCceEEEecCcc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------NFSNWASFRPQYM   87 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~~~~~~ilRp~~v   87 (255)
                      |+.++.+++++++..+++ ++++||..+++.....+..++.+..+ .+.|+..|...|         ++++++++||+++
T Consensus        93 ~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~-~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~v  170 (307)
T d1eq2a_          93 NYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKP-LNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNV  170 (307)
T ss_dssp             THHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCC-SSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEE
T ss_pred             cccccccccccccccccc-cccccccccccccccccccccccccc-ccccccccchhhhhccccccccccccccccceeE
Confidence            488999999999999985 77777777776655444555544443 467777666544         2899999999999


Q ss_pred             cCCCCCCC-----cHHHHHHHHHcCCCeec-cCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHH
Q 025270           88 IGSGNNKD-----CEEWFFDRIVRKRPVPI-PGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMA  161 (255)
Q Consensus        88 ~G~~~~~~-----~~~~~~~~~~~~~~~~i-~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~  161 (255)
                      |||.....     ....++..+..++...+ .|++...++|+|++|++.++..++++..   .+.||+++++..|++|++
T Consensus       171 yGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~---~~~~~~~~~~~~si~~i~  247 (307)
T d1eq2a_         171 YGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVA  247 (307)
T ss_dssp             ESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCBCHHHHH
T ss_pred             eeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc---ccccccccccchhHHHHH
Confidence            99976543     34566777777766544 5777888999999999999999998765   379999999999999999


Q ss_pred             HHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHH
Q 025270          162 KLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEY  227 (255)
Q Consensus       162 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~  227 (255)
                      +.+.+..+. .++...+.+....      .........|++|+++.+||.|.+++++||+++++|+
T Consensus       248 ~~i~~~~~~-~~i~~~~~~~~~~------~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         248 DATLAYHKK-GQIEYIPFPDKLK------GRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             HHC----------------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred             HHHHHhcCC-CCeeEeeCCccCC------CCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence            999877653 3333322211100      0011334569999999999999999999999999986

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.89  E-value=6.8e-23  Score=169.90  Aligned_cols=213  Identities=15%  Similarity=0.058  Sum_probs=150.3

Q ss_pred             CcccHHHHHHHHhhCC-cceEEEeccccccCCCC-CCCCCCCCCCCCCCChhHHHHHHHh------------------hC
Q 025270           17 NFRLQRPVADWAKSSG-VKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHVQVEKYISE------------------NF   76 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~-v~r~i~~Ss~~vy~~~~-~~~~~E~~~~~~~~~~y~~ek~~~e------------------~~   76 (255)
                      |+.++.+++++|++.+ .+.++++||..++.... ..+..|+.+..|. +.|+..|...+                  .+
T Consensus       106 Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~-~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~  184 (356)
T d1rkxa_         106 NVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-DPYSNSKGCAELVTSSYRNSFFNPANYGQHG  184 (356)
T ss_dssp             HTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS-SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC
T ss_pred             ccccchhhhhhhhccccccccccccccccccccccccccccccccCCC-CccccccccchhhhhHHhhhcccchhccccC
Confidence            4999999999999875 45566666555554433 3455666665553 66776665433                  26


Q ss_pred             CceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcC---CCCEEEe--
Q 025270           77 SNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAA---SSNIFNL--  149 (255)
Q Consensus        77 ~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~---~~~~~~i--  149 (255)
                      +.++++||+++|||++...  +++.+++.+..+.+ .+++.+.+.++++|++|+|+++..++.+....   .+...+.  
T Consensus       185 ~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~  263 (356)
T d1rkxa_         185 TAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGP  263 (356)
T ss_dssp             CEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCC
T ss_pred             ceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCc-eEEeeccccccccccccccchhhhhhhhhccccccccccccccc
Confidence            7899999999999986442  55666666665554 56778899999999999999999988764321   1233333  


Q ss_pred             cCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHH
Q 025270          150 VSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVK  229 (255)
Q Consensus       150 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~  229 (255)
                      ..+..+++.++++.+.+.+|...++.........         +...+.+|++|++++|||+|+++++++|+++++||+.
T Consensus       264 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         264 NDADATPVKNIVEQMVKYWGEGASWQLDGNAHPH---------EAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CGGGCEEHHHHHHHHHHHHCTTCCEEC----------------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhHHHhCCCccEEEcCCCCCC---------CcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            3455789999999999999987766543322111         2255678999999999999999999999999999998


Q ss_pred             hccccccccch
Q 025270          230 IGRDKKAMQFE  240 (255)
Q Consensus       230 ~~~~~~~~~~~  240 (255)
                      ....++..+|+
T Consensus       335 ~~~~~~~~~~~  345 (356)
T d1rkxa_         335 WLSGTDMHEYS  345 (356)
T ss_dssp             HHTTCCHHHHH
T ss_pred             HHcCCCHHHHH
Confidence            64433333333

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.87  E-value=1.3e-21  Score=161.38  Aligned_cols=197  Identities=12%  Similarity=0.016  Sum_probs=133.5

Q ss_pred             CcccHHHHHHHHhhC-CcceEEEeccccccCCCC----CCCCCC----------------CCCCCCCCChhHHHHHHHhh
Q 025270           17 NFRLQRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHVE----------------GDVVKPDAGHVQVEKYISEN   75 (255)
Q Consensus        17 n~~~~~~ll~aa~~~-~v~r~i~~Ss~~vy~~~~----~~~~~E----------------~~~~~~~~~~y~~ek~~~e~   75 (255)
                      |+.|+.+++++|++. ++++|||+||..+++...    .....|                +.+..| .+.|+.+|.+.|.
T Consensus       107 nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p-~~~Y~~sK~~~E~  185 (342)
T d1y1pa1         107 AIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKS-LWVYAASKTEAEL  185 (342)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHH-HHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCC-cCcccchhHhHHH
Confidence            489999999999987 699999999976543211    111222                222222 2457777655542


Q ss_pred             -----------CCceEEEecCcccCCCCCC----CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           76 -----------FSNWASFRPQYMIGSGNNK----DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        76 -----------~~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                                 ++.++++||+.+|||...+    ..+..+++.+..|...... .+.+.++|+|++|+|++++.+++++.
T Consensus       186 ~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l~~~~  264 (342)
T d1y1pa1         186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCLVLPQ  264 (342)
T ss_dssp             HHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHHHCTT
T ss_pred             HHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHHhhcCcc
Confidence                       4778899999999985432    2567788888888765443 35667899999999999999999876


Q ss_pred             cCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeeeecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHH
Q 025270          141 AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIVHYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDL  220 (255)
Q Consensus       141 ~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i  220 (255)
                      .  ++.|++++++.+|++|+++.|++.++...-....+......        ...+...+. +..+.|||.|.++++++|
T Consensus       265 ~--~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~--------~~~~~~~s~-~~~k~lg~~~~~~lee~i  333 (342)
T d1y1pa1         265 I--ERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDL--------SKFDTAPSL-EILKSLGRPGWRSIEESI  333 (342)
T ss_dssp             C--CSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCC--------CEECCHHHH-HHHHHTTCCSCCCHHHHH
T ss_pred             c--cceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCccc--------ccccchHHH-HHHHHcCCCCCcCHHHHH
Confidence            5  35566788889999999999999885321111111111110        001122233 444469999989999999


Q ss_pred             HHHHHH
Q 025270          221 KERFEE  226 (255)
Q Consensus       221 ~~~~~~  226 (255)
                      +++++.
T Consensus       334 ~d~I~s  339 (342)
T d1y1pa1         334 KDLVGS  339 (342)
T ss_dssp             HHHHCC
T ss_pred             HHHHHh
Confidence            999864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.78  E-value=1.9e-18  Score=138.99  Aligned_cols=202  Identities=13%  Similarity=0.135  Sum_probs=143.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHH-----HHhhCCceEEEecCcccCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY-----ISENFSNWASFRPQYMIGSG   91 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~-----~~e~~~~~~ilRp~~v~G~~   91 (255)
                      |+.++.+|+++|++.++ +++++||+.+|+.....|.+|+.+..|. +.|+..|.     +.++.....++|++..|+..
T Consensus        81 n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~-~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~  158 (298)
T d1n2sa_          81 NATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL-NVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGK  158 (298)
T ss_dssp             HTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS-SHHHHHHHHHHHHHHHHCSSEEEEEECSEECSS
T ss_pred             cccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCC-chHhhhhhhhhhhHHhhhcccccccccceeecc
Confidence            58899999999999886 6999999999988777889999988764 56665554     44456677777777766543


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC---CCcCCCCEEEecCCCccCHHHHHHHHHHHh
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN---PEAASSNIFNLVSDRAVTLDGMAKLCAQAA  168 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~---~~~~~~~~~~i~~~~~~s~~el~~~i~~~~  168 (255)
                      ... ....+.+.+..+..+.+.  +....+++|+.|+++++..+++.   .... +++||+++++.++..++++.+.+..
T Consensus       159 ~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         159 GNN-FAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPEV-AGLYHLVAGGTTTWHDYAALVFDEA  234 (298)
T ss_dssp             SCC-HHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGG-CEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred             CCc-cchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccccc-cccccccCCCceecHHHHHHHHhhh
Confidence            222 344455555666655554  45778999999999999888753   2222 5899999999999999999988765


Q ss_pred             CC---CCeee---ecCCCcccccccccCCcCCCceeeCHHHHHHhcCCCccCChHHHHHHHHHHHHHh
Q 025270          169 GL---PVEIV---HYDPKAAGIDAKKAFPFRNMHFYAEPRAAKDILGWRSTTNLPEDLKERFEEYVKI  230 (255)
Q Consensus       169 g~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  230 (255)
                      +.   .....   ..+.......     ..+..+..+|++|+++.|||+|+ +++++|+++++.+...
T Consensus       235 ~~~~~~~~~~~~~~i~~~~~~~~-----a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         235 RKAGITLALTELNAVPTSAYPTP-----ASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             HHHTCCCCCCEEEEECSTTSCCS-----SCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred             hccCccccccceeeeehhhcCcc-----CCCccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence            43   22221   1111111000     00123456899999999999997 9999999999988764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.66  E-value=1.3e-17  Score=134.86  Aligned_cols=157  Identities=10%  Similarity=0.094  Sum_probs=115.4

Q ss_pred             cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCC----CChhHHHHHHHhhCCceEEEecCcccCCC
Q 025270           16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWASFRPQYMIGSG   91 (255)
Q Consensus        16 ~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~----~~~y~~ek~~~e~~~~~~ilRp~~v~G~~   91 (255)
                      .|..++.+++++|++.+..+++++||.+++......      +..+.    ..+..++++..+.+++++++||+.+||+.
T Consensus        90 ~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g~~  163 (312)
T d1qyda_          90 HHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH------ALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYF  163 (312)
T ss_dssp             TTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCC------CCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHHHH
T ss_pred             cchhhhhHHHHHHHHhcCCcEEEEeeccccCCCccc------ccchhhhhhHHHHHHHHhhcccccceEEeccceeecCC
Confidence            358899999999999987788889987665443221      12222    13344666666779999999999999964


Q ss_pred             CCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCC
Q 025270           92 NNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLP  171 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~  171 (255)
                      .... ...+......+..+.++++|++.+++||++|+|++++.+++++...++.+|++++++.+|++|+++.+++.+|.+
T Consensus       164 ~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~  242 (312)
T d1qyda_         164 AGSL-AQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQN  242 (312)
T ss_dssp             TTTS-SCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCC
T ss_pred             ccch-hhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCC
Confidence            4321 111111223455677888999999999999999999999998876542346666677899999999999999999


Q ss_pred             CeeeecCC
Q 025270          172 VEIVHYDP  179 (255)
Q Consensus       172 ~~~~~~~~  179 (255)
                      .++...+.
T Consensus       243 ~~~~~i~~  250 (312)
T d1qyda_         243 LDKIYISS  250 (312)
T ss_dssp             CEECCBCS
T ss_pred             CeEEECCH
Confidence            88877765

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.62  E-value=5.1e-17  Score=130.60  Aligned_cols=160  Identities=14%  Similarity=0.078  Sum_probs=118.1

Q ss_pred             cCcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCC
Q 025270           16 NNFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKD   95 (255)
Q Consensus        16 ~n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~   95 (255)
                      .+..++.+++++++.++++++++.||.........  ..+... .....++..++.+.+.+++++++||+.+||+.... 
T Consensus        87 ~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~-  162 (307)
T d1qyca_          87 LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH--AVEPAK-SVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRS-  162 (307)
T ss_dssp             GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCC--CCTTHH-HHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTT-
T ss_pred             cccchhhHHHHHHHHhccccceeeecccccccccc--cccccc-ccccccccccchhhccCCCceecccceecCCCccc-
Confidence            56888999999999999888999888554432211  100000 00113345666777889999999999999975442 


Q ss_pred             cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCCccCHHHHHHHHHHHhCCCCeee
Q 025270           96 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVEIV  175 (255)
Q Consensus        96 ~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~  175 (255)
                       +..++....++....+++++++.++|+|++|+|++++.+++++...++.+|++++++.+|+.|+++.+.+.+|.+.++.
T Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~  241 (307)
T d1qyca_         163 -LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKA  241 (307)
T ss_dssp             -TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEE
T ss_pred             -hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEE
Confidence             2222334455666778888999999999999999999999988765434566777889999999999999999998887


Q ss_pred             ecCCC
Q 025270          176 HYDPK  180 (255)
Q Consensus       176 ~~~~~  180 (255)
                      .+|..
T Consensus       242 ~~~~~  246 (307)
T d1qyca_         242 YVPEE  246 (307)
T ss_dssp             EECHH
T ss_pred             ECCHH
Confidence            76543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.9e-13  Score=104.80  Aligned_cols=119  Identities=19%  Similarity=0.220  Sum_probs=87.1

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCc-eEEEecCcccCCCCCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-WASFRPQYMIGSGNNKD   95 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~-~~ilRp~~v~G~~~~~~   95 (255)
                      |+.++.+++++|++.++++|||+||..+++....         .+..+|+.+|+.+.+.+++ ++|+||+.+||++....
T Consensus       104 ~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~---------~Y~~~K~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~  174 (232)
T d2bkaa1         104 DRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF---------LYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESR  174 (232)
T ss_dssp             HTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS---------HHHHHHHHHHHHHHTTCCSEEEEEECCEEECTTGGGS
T ss_pred             cccccceeeecccccCccccccCCccccccCccc---------hhHHHHHHhhhccccccccceEEecCceeecCCCcCc
Confidence            5889999999999999999999999887754321         1123566678888888886 89999999999876654


Q ss_pred             cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           96 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        96 ~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                      ....++.......+     .+......||++|+|++++.++.++..  ++.+.+.+
T Consensus       175 ~~~~~~~~~~~~~~-----~~~~~~~~I~~~dvA~a~i~~~~~~~~--~~~~i~~~  223 (232)
T d2bkaa1         175 PGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAMLNNVVRPRD--KQMELLEN  223 (232)
T ss_dssp             HHHHHHHHHHCSCC-----TTGGGGTEEEHHHHHHHHHHHHTSCCC--SSEEEEEH
T ss_pred             HHHHHHHHHhhccC-----CcccCCCeEEHHHHHHHHHHHHhcCcc--CCeEEEcH
Confidence            44445555544321     233445579999999999999887765  46666553

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=6.2e-13  Score=100.92  Aligned_cols=117  Identities=13%  Similarity=0.083  Sum_probs=86.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      +..++.++++++++++++|||++||.+++++....+...   ......+..+|+++++.+++++++||+.+++.....  
T Consensus        87 ~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~---~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~~~--  161 (205)
T d1hdoa_          87 MSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL---QAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG--  161 (205)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGG---HHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCCS--
T ss_pred             hHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccc---cccchHHHHHHHHHHhcCCceEEEecceecCCCCcc--
Confidence            367899999999999999999999999887644322110   000113455788888889999999999998753322  


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecC
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVS  151 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~  151 (255)
                                 . ..+..++.....+|+++|+|++++.++++++.. |+.+.++.
T Consensus       162 -----------~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~-g~~~~~s~  203 (205)
T d1hdoa_         162 -----------A-YTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD-GHSTYPSH  203 (205)
T ss_dssp             -----------C-CEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTT-TCEEEEEC
T ss_pred             -----------c-EEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCC-CEEEecCC
Confidence                       1 233445677788999999999999999988754 57777654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.30  E-value=5.6e-13  Score=101.64  Aligned_cols=108  Identities=18%  Similarity=0.139  Sum_probs=75.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCc-eEEEecCcccCCCCCCC
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN-WASFRPQYMIGSGNNKD   95 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~-~~ilRp~~v~G~~~~~~   95 (255)
                      |+.++.+++++|++.++++|+++||.++++.....         +..+|+..|+.+.+.+++ ++|+||+.|||+.....
T Consensus        87 ~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~---------y~~~K~~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~  157 (212)
T d2a35a1          87 DFDLPLAVGKRALEMGARHYLVVSALGADAKSSIF---------YNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFR  157 (212)
T ss_dssp             HTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSH---------HHHHHHHHHHHHTTSCCSEEEEEECCSEESTTSCEE
T ss_pred             hhhhhhhcccccccccccccccccccccccccccc---------hhHHHHHHhhhccccccccceeeCCcceeCCccccc
Confidence            47889999999999999999999998887543210         112456666666666774 99999999999876543


Q ss_pred             cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           96 CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        96 ~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      ...     .. ...+...  ....+++||++|+|++++.+++++..
T Consensus       158 ~~~-----~~-~~~~~~~--~~~~~~~i~v~DvA~ai~~~~~~~~~  195 (212)
T d2a35a1         158 LAE-----IL-AAPIARI--LPGKYHGIEACDLARALWRLALEEGK  195 (212)
T ss_dssp             GGG-----GT-TCCCC------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             HHH-----HH-HHHHhhc--cCCCCcEEEHHHHHHHHHHHHcCCCC
Confidence            111     11 1111111  11335679999999999999998764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.29  E-value=1.3e-12  Score=107.02  Aligned_cols=158  Identities=13%  Similarity=-0.021  Sum_probs=110.2

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      +...+.+++++|+++|++++++.||..........     ........+...++++.+.+++++++|++.+++.......
T Consensus        86 ~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~  160 (350)
T d1xgka_          86 EIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW-----PAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPY  160 (350)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC-----CCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGGGCBSSSC
T ss_pred             hhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc-----cchhhhhhHHHHHHHHHhhccCceeeeeceeecccccccc
Confidence            46788999999999999888888886544322211     1111123567788888888999999999998875332210


Q ss_pred             HHHHHHHHHcCC-CeeccCCCCcceeeeeH-HHHHHHHHHHhcCCC-cCCCCEEEecCCCccCHHHHHHHHHHHhCCCCe
Q 025270           97 EEWFFDRIVRKR-PVPIPGSGMQFTNIAHV-RDLSSMLTLAVENPE-AASSNIFNLVSDRAVTLDGMAKLCAQAAGLPVE  173 (255)
Q Consensus        97 ~~~~~~~~~~~~-~~~i~~~~~~~~~~i~v-~D~a~~~~~~l~~~~-~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~  173 (255)
                      ..........+. ....+.+++..++++++ +|+++++..++.... ...|++|++++ +.+|++|+++.+++.+|++++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~  239 (350)
T d1xgka_         161 PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVT  239 (350)
T ss_dssp             SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred             ccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcce
Confidence            000000111222 23455567888888986 799999999997543 23468999986 569999999999999999999


Q ss_pred             eeecCCC
Q 025270          174 IVHYDPK  180 (255)
Q Consensus       174 ~~~~~~~  180 (255)
                      +..+|..
T Consensus       240 ~~~vp~~  246 (350)
T d1xgka_         240 YVQVPKV  246 (350)
T ss_dssp             EEECSSC
T ss_pred             EEECCHH
Confidence            8888764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.17  E-value=5.3e-12  Score=97.50  Aligned_cols=140  Identities=16%  Similarity=0.152  Sum_probs=92.8

Q ss_pred             CcccHHHHHHHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHhhCCceEEEecCcccCCCCCCCc
Q 025270           17 NFRLQRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDC   96 (255)
Q Consensus        17 n~~~~~~ll~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e~~~~~~ilRp~~v~G~~~~~~~   96 (255)
                      |+.++.+++..+...+.+++.+.|+...+......  ...........++..+++..+.+++++++||+++||+..... 
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-  184 (252)
T d2q46a1         108 DWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL--NKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR-  184 (252)
T ss_dssp             TTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG--GGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSS-
T ss_pred             ccccceeeccccccccccccccccccccCCCCccc--ccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchh-
Confidence            47899999999999888899999887665432211  000000011123445555666799999999999999875432 


Q ss_pred             HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCCEEEecCCC---ccCHHHHHHHHHHHhC
Q 025270           97 EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSNIFNLVSDR---AVTLDGMAKLCAQAAG  169 (255)
Q Consensus        97 ~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~i~~~~---~~s~~el~~~i~~~~g  169 (255)
                            .+..+....+   .....++||++|+|++++.+++++... |++||++++.   ..+++|+.+++++..+
T Consensus       185 ------~~~~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~~~~-g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         185 ------ELLVGKDDEL---LQTDTKTVPRADVAEVCIQALLFEEAK-NKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             ------CEEEESTTGG---GGSSCCEEEHHHHHHHHHHHTTCGGGT-TEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             ------hhhhccCccc---ccCCCCeEEHHHHHHHHHHHhCCcccc-CcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence                  1111111111   133457999999999999999988764 5899998643   4567788777766544

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00022  Score=54.57  Aligned_cols=129  Identities=10%  Similarity=0.134  Sum_probs=80.5

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      |.+.+.|+.++++|  +.++..+.+++.    +.+-.++|++||........            ....|.++|....   
T Consensus       105 e~~~e~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~lt  170 (255)
T d1fmca_         105 DMPMADFRRAYELN--VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI------------NMTSYASSKAAASHLV  170 (255)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT------------TCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHH--HHHhhhhHHHHHhhhccccccccccccccchhcccc------------ccccchhHHHHHHHHH
Confidence            45566778888888  777666665554    33445799999866543211            1256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               +|+.+..+.||.|-.+.......+.....+....++       .  -+...+|+|.++..++..... ..|
T Consensus       171 ~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl-------~--R~g~pedvA~~v~fL~S~~s~~itG  241 (255)
T d1fmca_         171 RNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI-------R--RLGQPQDIANAALFLCSPAASWVSG  241 (255)
T ss_dssp             HHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS-------C--SCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHHHhCchhcCCcC
Confidence                     379999999998854321111222333444433221       1  145789999999999875443 457


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       242 ~~i~vDGG~  250 (255)
T d1fmca_         242 QILTVSGGG  250 (255)
T ss_dssp             CEEEESTTS
T ss_pred             CEEEECcCc
Confidence            899998886

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.01  E-value=0.0011  Score=50.31  Aligned_cols=128  Identities=10%  Similarity=0.144  Sum_probs=78.9

Q ss_pred             cCccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.++.++++|  +.++..+.+++    ++.+-.++|++||...+....            ....|.++|...     
T Consensus        91 ~~~e~~~~~~~vn--l~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~------------~~~~Y~asKaal~~lt~  156 (252)
T d1zmta1          91 YAVEDYRGAVEAL--QIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK------------ELSTYTSARAGACTLAN  156 (252)
T ss_dssp             SCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH--hHHHHHHHHHHHHhhcccccceeecccccccccccc------------cccccccccccHHHHHH
Confidence            3445566677777  66666666554    344445899999976543211            124677766532     


Q ss_pred             -------hhCCceEEEecCcccCCCCCCCc-------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKDC-------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                             .+++.+..+.||.|-.+......       .+.....+.+..++       .  -+...+|+|.++..++...
T Consensus       157 ~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl-------~--R~g~pedvA~~v~fL~S~~  227 (252)
T d1zmta1         157 ALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-------Q--RLGTQKELGELVAFLASGS  227 (252)
T ss_dssp             HHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS-------S--SCBCHHHHHHHHHHHHTTS
T ss_pred             HHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHHHhCch
Confidence                   23899999999998665432211       11223333322211       1  1567899999999999765


Q ss_pred             Cc-CCCCEEEecCCC
Q 025270          140 EA-ASSNIFNLVSDR  153 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~  153 (255)
                      .. ..|+++.+.+|-
T Consensus       228 s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         228 CDYLTGQVFWLAGGF  242 (252)
T ss_dssp             CGGGTTCEEEESTTC
T ss_pred             hcCCcCCeEEECCCc
Confidence            54 457899998875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.97  E-value=0.00031  Score=53.84  Aligned_cols=130  Identities=12%  Similarity=0.162  Sum_probs=68.1

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.+.++.++++|  +.++..+.+++.    +.+-.++|++||........            ....|.++|....   
T Consensus       104 ~~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt  169 (259)
T d1xq1a_         104 DYTAEDFSFHISTN--LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS------------VGSIYSATKGALNQLA  169 (259)
T ss_dssp             CCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHSSCEEEEEC----------------------CCHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHH--hhhheeeehhhhhccccccccccccccccccccccc------------ccccccccccchhhhh
Confidence            44556677788888  777666666554    34556899999966432211            1256777765432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               +++.+..+-||.|-.+.............+....  +       ..-+...+|+|.++..++..... ..|
T Consensus       170 ~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~--p-------l~R~~~pedvA~~v~fL~S~~s~~iTG  240 (259)
T d1xq1a_         170 RNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRK--P-------LGRFGEPEEVSSLVAFLCMPAASYITG  240 (259)
T ss_dssp             HHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCC--C-------CCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence                     3899999999988554322111111111111111  1       11256789999999998864433 357


Q ss_pred             CEEEecCCCc
Q 025270          145 NIFNLVSDRA  154 (255)
Q Consensus       145 ~~~~i~~~~~  154 (255)
                      +++.+.+|..
T Consensus       241 ~~i~vDGG~s  250 (259)
T d1xq1a_         241 QTICVDGGLT  250 (259)
T ss_dssp             CEEECCCCEE
T ss_pred             cEEEeCCCEE
Confidence            8888887753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.93  E-value=0.0003  Score=53.17  Aligned_cols=128  Identities=11%  Similarity=0.107  Sum_probs=76.5

Q ss_pred             ccCccccceEEecccCcccHHHHH----HHHhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll----~aa~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.+.|+.++++|  +.++..+.    ...++.+-.++|++||........            ....|.++|....   
T Consensus        91 ~~~~e~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt  156 (237)
T d1uzma1          91 RMTEEKFEKVINAN--LTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG------------NQANYAASKAGVIGMA  156 (237)
T ss_dssp             CCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CCHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHhh--hhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc------------ccHHHHHHHHHHHHHH
Confidence            44566778888888  66655554    455556667899999966442211            1256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               .++.+..+.||.+.-+.... ........+....  ++       .-+...+|+|.++..++..... ..|
T Consensus       157 ~~lA~e~~~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~--pl-------~R~~~pedvA~~v~fL~S~~s~~itG  226 (237)
T d1uzma1         157 RSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQGALQFI--PA-------KRVGTPAEVAGVVSFLASEDASYISG  226 (237)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHHHGGGC--TT-------CSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHhhhhcCCceeeeeeeCcCCChhhhc-cCHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHhCchhcCCcC
Confidence                     37899999999885431110 1111222222211  11       1256889999999998875443 457


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|-
T Consensus       227 ~~i~vdGG~  235 (237)
T d1uzma1         227 AVIPVDGGM  235 (237)
T ss_dssp             CEEEESTTT
T ss_pred             CeEEECCCC
Confidence            899888774

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.89  E-value=0.00073  Score=51.40  Aligned_cols=127  Identities=10%  Similarity=0.113  Sum_probs=78.5

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.|+.++++|  +.++..+..++.    +.+-.++|++||........            ....|.++|...     
T Consensus       106 ~~~~~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~------------~~~~Y~asKaal~~ltr  171 (251)
T d2c07a1         106 MKNDEWEDVLRTN--LNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV------------GQANYSSSKAGVIGFTK  171 (251)
T ss_dssp             CCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHhhhheee--ehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC------------CCHHHHHHHHHHHHHHH
Confidence            3445677777777  777766666544    44556899999976542211            125677777542     


Q ss_pred             -------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                             .+|+.+..+.||.|-.+.... ........+....+  +     .  -+...+|+|.++..++..... ..|+
T Consensus       172 ~lA~el~~~gIrVN~V~PG~v~T~~~~~-~~~~~~~~~~~~~p--l-----~--R~~~pedvA~~v~fL~S~~s~~itG~  241 (251)
T d2c07a1         172 SLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNIISNIP--A-----G--RMGTPEEVANLACFLSSDKSGYINGR  241 (251)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHHHTTCT--T-----S--SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhhhhCeEEEEEccCCEecccccc-cCHHHHHHHHhcCC--C-----C--CCcCHHHHHHHHHHHhCchhCCCcCc
Confidence                   238999999999986654322 22233333433322  1     1  156789999999998875443 3578


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      ++.+.+|-
T Consensus       242 ~i~vDGG~  249 (251)
T d2c07a1         242 VFVIDGGL  249 (251)
T ss_dssp             EEEESTTS
T ss_pred             EEEECCCc
Confidence            99888774

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.80  E-value=0.0019  Score=48.70  Aligned_cols=127  Identities=9%  Similarity=0.065  Sum_probs=79.1

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.|+.++++|  +.++..+.+++.    +.+-.+++.+||.+..+..             ....|.++|....    
T Consensus        96 ~~~~~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~-------------~~~~Y~asKaal~~ltk  160 (242)
T d1ulsa_          96 MPLEDWELVLRVN--LTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-------------GQANYAASMAGVVGLTR  160 (242)
T ss_dssp             CCHHHHHHHHHHH--HHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-------------TCHHHHHHHHHHHHHHH
T ss_pred             Ccchhhhcccccc--chhhhhhhhhccccccccccceeeeeccccccCCC-------------CCcchHHHHHHHHHHHH
Confidence            4556677778888  777666666554    3455567777775443321             1256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                              +++.+..+.||.|--+.... ........+....++.         -+...+|+|.++..++..... ..|+
T Consensus       161 ~lA~ela~~gIrVN~I~PG~v~T~~~~~-~~~~~~~~~~~~~pl~---------R~~~pedia~~v~fL~S~~s~~itG~  230 (242)
T d1ulsa_         161 TLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAIAATPLG---------RAGKPLEVAYAALFLLSDESSFITGQ  230 (242)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHhhhCcEEEEEeeCcccChhhhc-CCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHhchhhCCCCCc
Confidence                    37999999999986554332 2223333433332211         145789999999999875443 3578


Q ss_pred             EEEecCCCc
Q 025270          146 IFNLVSDRA  154 (255)
Q Consensus       146 ~~~i~~~~~  154 (255)
                      ++.+.+|..
T Consensus       231 ~i~vDGG~t  239 (242)
T d1ulsa_         231 VLFVDGGRT  239 (242)
T ss_dssp             EEEESTTTT
T ss_pred             EEEECCCcc
Confidence            999888764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.79  E-value=0.00075  Score=51.20  Aligned_cols=130  Identities=11%  Similarity=0.121  Sum_probs=74.0

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      +.+.+.|+.++++|  +.++..+.+++.    +.+-.++|++||........            ....|.++|...    
T Consensus        98 ~~~~e~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt  163 (247)
T d2ew8a1          98 ELTFEQWKKTFEIN--VDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE------------AYTHYISTKAANIGFT  163 (247)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS------------SCHHHHHHHHHHHHHH
T ss_pred             hCCHHHhhhhheee--hhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc------------ccccchhhhccHHHHH
Confidence            34566778888888  777666666554    44556899999976542211            125677777542    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                              .+++.+..+.||.|-.+................ ..       ....-+...+|+|+++..++..... ..|
T Consensus       164 k~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~-~~-------~~l~r~~~pedvA~~v~fL~S~~s~~itG  235 (247)
T d2ew8a1         164 RALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPN-ML-------QAIPRLQVPLDLTGAAAFLASDDASFITG  235 (247)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCC------------------C-TT-------SSSCSCCCTHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHH-Hh-------ccCCCCCCHHHHHHHHHHHhCchhcCCcC
Confidence                    237999999999886543222111111111110 00       0111255789999999999875443 357


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       236 ~~i~vDGG~  244 (247)
T d2ew8a1         236 QTLAVDGGM  244 (247)
T ss_dssp             CEEEESSSC
T ss_pred             CeEEECCCE
Confidence            899888774

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.00054  Score=51.90  Aligned_cols=128  Identities=7%  Similarity=0.032  Sum_probs=78.6

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.+.++.++++|  +.++..+.+++.    +.+-.++|++||........            ....|.++|....   
T Consensus        96 ~~~~~~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~------------~~~~Y~asKaal~~lt  161 (243)
T d1q7ba_          96 RMKDEEWNDIIETN--LSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG------------GQANYAAAKAGLIGFS  161 (243)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccee--echhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC------------CCHHHHHHHHHHHHHH
Confidence            34556677777778  777777666664    33446899999976543211            1256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               +++.+..+.||.+--+.... ........+....+  +       .-+...+|+|.++..++..... ..|
T Consensus       162 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p--l-------~R~~~pedvA~~v~fL~S~~s~~itG  231 (243)
T d1q7ba_         162 KSLAREVASRGITVNVVAPGFIETDMTRA-LSDDQRAGILAQVP--A-------GRLGGAQEIANAVAFLASDEAAYITG  231 (243)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHHHTTCT--T-------SSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHhCccCeEEEEEecceEechhhhh-hhhhHHHHHHhcCC--C-------CCCCCHHHHHHHHHHHhCchhcCCcC
Confidence                     38999999999874321111 11122222222221  1       1256789999999999875443 457


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       232 q~i~vdGG~  240 (243)
T d1q7ba_         232 ETLHVNGGM  240 (243)
T ss_dssp             CEEEESTTS
T ss_pred             CeEEECCCe
Confidence            899988875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.70  E-value=0.00079  Score=50.61  Aligned_cols=128  Identities=10%  Similarity=0.094  Sum_probs=75.7

Q ss_pred             cCccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.++.+++.|  +.++..+.+++    ++.+-.++|.+||........            ....|...|...     
T Consensus        85 ~~~~~~~~~~~~n--~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~------------~~~~Y~asKaal~~ltk  150 (234)
T d1o5ia_          85 LTNEDFKEAIDSL--FLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE------------NLYTSNSARMALTGFLK  150 (234)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHhhhh--hhhhhhhhhccccccccccccccccccccccccccc------------ccccchhHHHHHHHHHH
Confidence            4455667777777  66655555544    444556899999876543221            124566555432     


Q ss_pred             -------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCC
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSN  145 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~  145 (255)
                             .+++.+-.+.||.+-.+......-......+....+  +       .-+...+|+|.++..++..... ..|+
T Consensus       151 ~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~p--l-------~R~~~pediA~~v~fL~S~~s~~itG~  221 (234)
T d1o5ia_         151 TLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIP--M-------RRMAKPEEIASVVAFLCSEKASYLTGQ  221 (234)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTST--T-------SSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhChhhcCCcCc
Confidence                   238999999999885543211111122222222211  1       1256899999999998875443 3578


Q ss_pred             EEEecCCC
Q 025270          146 IFNLVSDR  153 (255)
Q Consensus       146 ~~~i~~~~  153 (255)
                      ++.+.+|-
T Consensus       222 ~i~vDGG~  229 (234)
T d1o5ia_         222 TIVVDGGL  229 (234)
T ss_dssp             EEEESTTC
T ss_pred             EEEECccc
Confidence            99888774

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.61  E-value=0.00063  Score=51.67  Aligned_cols=131  Identities=6%  Similarity=0.014  Sum_probs=78.2

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.+.|+.+++.|  +.++.++.+++.    +.+-.++|++||...+....            ....|.++|....   
T Consensus        94 ~~~~e~~~~~~~vN--l~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~lt  159 (248)
T d2d1ya1          94 TVRLPEWRRVLEVN--LTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ------------ENAAYNASKGGLVNLT  159 (248)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT------------TBHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHhh--hhhHhhhhhhhccccccccccccccccccccccccc------------ccchhHHHHHHHHHHH
Confidence            44556677788888  777777766665    34456899999976543211            2256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCC----c-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKD----C-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~----~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                               +++.+..+.||.|-.+.....    . ...+...+....         ...-+...+|+|+++..++....
T Consensus       160 k~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------pl~R~~~pedia~~v~fL~S~~s  230 (248)
T d2d1ya1         160 RSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH---------ALRRLGKPEEVAEAVLFLASEKA  230 (248)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCchh
Confidence                     389999999987743210000    0 000011111111         11125678999999999987544


Q ss_pred             c-CCCCEEEecCCCcc
Q 025270          141 A-ASSNIFNLVSDRAV  155 (255)
Q Consensus       141 ~-~~~~~~~i~~~~~~  155 (255)
                      . ..|+++.+.+|-.-
T Consensus       231 ~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         231 SFITGAILPVDGGMTA  246 (248)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCCCcEEEcCcCccc
Confidence            3 45789999887543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.58  E-value=0.0015  Score=49.54  Aligned_cols=130  Identities=13%  Similarity=0.088  Sum_probs=78.5

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      +++.+.|+.+++.|  +.++..+.+++.    +.+-.++|++||........           +....|..+|...    
T Consensus       101 ~~~~e~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~-----------~~~~~Y~asKaal~~lt  167 (251)
T d1vl8a_         101 EFPLDEFRQVIEVN--LFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-----------PNISAYAASKGGVASLT  167 (251)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-----------SSCHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHhh--hhhhhhhhhhhhhcccccccccccccccchhccccC-----------ccccchHHHHHhHHHHH
Confidence            34566777788888  766666655544    44556899999854321110           1124677777542    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                              .+|+.+..+.||.|-.+...... -+.....+....++         .-+...+|+|+++..++..... ..
T Consensus       168 ~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~a~~it  238 (251)
T d1vl8a_         168 KALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL---------GRTGVPEDLKGVAVFLASEEAKYVT  238 (251)
T ss_dssp             HHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT---------SSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCchhCCCc
Confidence                    23899999999988654322110 12233333333221         1145789999999998875443 45


Q ss_pred             CCEEEecCCC
Q 025270          144 SNIFNLVSDR  153 (255)
Q Consensus       144 ~~~~~i~~~~  153 (255)
                      |+++.+.+|.
T Consensus       239 G~~i~vDGG~  248 (251)
T d1vl8a_         239 GQIIFVDGGW  248 (251)
T ss_dssp             SCEEEESTTG
T ss_pred             CcEEEeCcCe
Confidence            7899888774

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.57  E-value=0.0043  Score=47.01  Aligned_cols=127  Identities=9%  Similarity=-0.032  Sum_probs=75.1

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.++.+++.|  +.++..+.+++.    +.+-.++|++||...+....            ....|.++|....    
T Consensus        98 ~~~~~~~~~~~vN--~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~------------~~~~Y~asKaal~~lt~  163 (254)
T d1hdca_          98 ESVERFRKVVEIN--LTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA------------LTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             SCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhHH--hhHHHHHHHHHHHHHhhcCCCeecccccchhccccc------------chhhHHHHHHHHHHHHH
Confidence            4455677777777  777766666654    44556899999976543211            1256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccC-CCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPG-SGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                              +++.+..+.||.|-.+         +.........-.... .+.. +--...+|+|.++..++..... ..|
T Consensus       164 ~lA~e~a~~gIrVN~I~PG~v~T~---------~~~~~~~~~~~~~~~~~pl~-R~g~~PedvA~~v~fL~S~~a~~itG  233 (254)
T d1hdca_         164 LAAVELGTDRIRVNSVHPGMTYTP---------MTAETGIRQGEGNYPNTPMG-RVGNEPGEIAGAVVKLLSDTSSYVTG  233 (254)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBCCH---------HHHHHTCCCSTTSCTTSTTS-SCB-CHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHhCCCceEEEEeeeCcccCc---------cchhcCHHHHHHHHhCCCCC-CCCCCHHHHHHHHHHHhchhhCCCCC
Confidence                    3799999999987432         122221111000000 0111 1113479999999999864433 457


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       234 ~~i~vDGG~  242 (254)
T d1hdca_         234 AELAVDGGW  242 (254)
T ss_dssp             CEEEESTTT
T ss_pred             ceEEeCCCc
Confidence            999998875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.54  E-value=0.0017  Score=49.10  Aligned_cols=124  Identities=9%  Similarity=0.065  Sum_probs=77.6

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.+.|+.++++|  +.++..+.+++.    +.+-.++|++||...+....            ....|.++|....   
T Consensus        98 ~~~~~~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~lt  163 (244)
T d1nffa_          98 DYALTEWQRILDVN--LTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV------------ACHGYTATKFAVRGLT  163 (244)
T ss_dssp             TSCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHH
T ss_pred             hCCHHHHhHHhhcc--cchhhHHHHHHHhHHHhcCcceEEeccccccccccc------------cccchhhHHHHHHHHH
Confidence            44566777888888  777776666543    34446899999976543211            1256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                               +|+.+..+-||.+-.+....         +. ......   +  ..-+...+|+|.++..++..... ..|
T Consensus       164 k~lA~el~~~gIrVN~I~PG~i~T~~~~~---------~~-~~~~~~---p--l~R~~~p~diA~~v~fL~s~~s~~itG  228 (244)
T d1nffa_         164 KSTALELGPSGIRVNSIHPGLVKTPMTDW---------VP-EDIFQT---A--LGRAAEPVEVSNLVVYLASDESSYSTG  228 (244)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCSGGGTT---------SC-TTCSCC---S--SSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHhcccCEEEEEEeeCCccChhHhh---------hh-HHHHhc---c--ccCCCCHHHHHHHHHHHhChhhCCCcC
Confidence                     38999999999885442111         00 000001   1  11267899999999999875433 457


Q ss_pred             CEEEecCCCc
Q 025270          145 NIFNLVSDRA  154 (255)
Q Consensus       145 ~~~~i~~~~~  154 (255)
                      +++.+.+|..
T Consensus       229 ~~i~vDGG~~  238 (244)
T d1nffa_         229 AEFVVDGGTV  238 (244)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCCee
Confidence            8999888753

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.52  E-value=0.0009  Score=50.64  Aligned_cols=128  Identities=11%  Similarity=0.084  Sum_probs=77.0

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      +.+.+.|+.+++.|  +.++..+.+++.    +.+-.++|++||...+-...            ....|..+|...    
T Consensus        97 ~~~~~~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~------------~~~~Y~asKaal~~lt  162 (244)
T d1edoa_          97 RMKKSQWDEVIDLN--LTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI------------GQANYAAAKAGVIGFS  162 (244)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHhhh--hhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC------------CCHHHHHHHHHHHHCh
Confidence            34556677788888  766666655554    44556899999976442211            125677777543    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--AS  143 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~  143 (255)
                              .+|+.+..+.||.+--+.... ........+....+  +       .-+...+|+|+++..++..+..  ..
T Consensus       163 k~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~p--l-------~R~~~p~dvA~~v~fLa~S~~a~~it  232 (244)
T d1edoa_         163 KTAAREGASRNINVNVVCPGFIASDMTAK-LGEDMEKKILGTIP--L-------GRTGQPENVAGLVEFLALSPAASYIT  232 (244)
T ss_dssp             HHHHHHHHTTTEEEEEEEECSBCSHHHHT-TCHHHHHHHHTSCT--T-------CSCBCHHHHHHHHHHHHHCSGGGGCC
T ss_pred             HHHHHHHhhhCcEEEEEecceeccHHHHH-hhHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHHCCchhcCCc
Confidence                    238999999999874331111 11223333332221  1       1156789999999988643332  45


Q ss_pred             CCEEEecCCC
Q 025270          144 SNIFNLVSDR  153 (255)
Q Consensus       144 ~~~~~i~~~~  153 (255)
                      |+++.+.+|-
T Consensus       233 G~~i~vdGG~  242 (244)
T d1edoa_         233 GQAFTIDGGI  242 (244)
T ss_dssp             SCEEEESTTT
T ss_pred             CCeEEeCCCe
Confidence            7899888774

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.50  E-value=0.0019  Score=49.23  Aligned_cols=129  Identities=13%  Similarity=0.159  Sum_probs=78.0

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +++.+.|+.+++.|  +.++..+.+++.    +.+..++|++||........            ....|+..|...+   
T Consensus       102 ~~~~~~~~~~~~~n--l~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~------------~~~~Y~~sK~al~~lt  167 (258)
T d1ae1a_         102 DFTEKDYNIIMGTN--FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP------------SVSLYSASKGAINQMT  167 (258)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHhhhhhhc--cccccccccccccccccccccccccccccccccccc------------cchhHHHHHHHHHHHH
Confidence            34556677777777  777766666554    34567899999977653221            1246776664322   


Q ss_pred             ---------hCCceEEEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           75 ---------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                               .++.+-.+.||.+..+.....     ........+....++       .  -+...+|+|.++..++....
T Consensus       168 ~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-------g--R~~~pediA~~v~fL~S~~s  238 (258)
T d1ae1a_         168 KSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-------G--RAGKPQEVSALIAFLCFPAA  238 (258)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-------C--SCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHHHhChhh
Confidence                     378999999999976532221     112233333332211       1  16789999999999996544


Q ss_pred             c-CCCCEEEecCCC
Q 025270          141 A-ASSNIFNLVSDR  153 (255)
Q Consensus       141 ~-~~~~~~~i~~~~  153 (255)
                      . ..|+.+.+-+|-
T Consensus       239 ~~itG~~i~vDGG~  252 (258)
T d1ae1a_         239 SYITGQIIWADGGF  252 (258)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             CCCcCcEEEeCCCe
Confidence            3 357888888774

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.49  E-value=0.0016  Score=49.67  Aligned_cols=131  Identities=11%  Similarity=0.011  Sum_probs=77.4

Q ss_pred             ccCccccceEEecccCcccHHHHHHHH----hhCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWA----KSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---   73 (255)
                      +.+.+.|+.++++|  +.++..+.+++    .+.+- .++|++||.......            +....|..+|...   
T Consensus       103 ~~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~------------~~~~~Y~asKaal~~l  168 (261)
T d1geea_         103 EMSLSDWNKVIDTN--LTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW------------PLFVHYAASKGGMKLM  168 (261)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------------TTCHHHHHHHHHHHHH
T ss_pred             hcCHHHHHHHHHHh--cccchhHHHHHhhhhccccccccccccccchhcccC------------ccccccccCCccchhh
Confidence            34556677778888  76666555544    44443 358889986644221            1125677777543   


Q ss_pred             ---------hhCCceEEEecCcccCCCCCCCcH-HHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 ---------ENFSNWASFRPQYMIGSGNNKDCE-EWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 ---------e~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                               .+++.+..+.||.|--+....... ......+....+  +     .  -+...+|+|.++..++..... .
T Consensus       169 t~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p--l-----~--R~~~pediA~~v~fL~S~~s~~i  239 (261)
T d1geea_         169 TETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP--M-----G--YIGEPEEIAAVAAWLASSEASYV  239 (261)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT--T-----S--SCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCC--C-----C--CCCCHHHHHHHHHHHhCchhcCC
Confidence                     238999999999885442111100 112222222211  1     1  156789999999999875443 4


Q ss_pred             CCCEEEecCCCcc
Q 025270          143 SSNIFNLVSDRAV  155 (255)
Q Consensus       143 ~~~~~~i~~~~~~  155 (255)
                      .|+++.+.+|..+
T Consensus       240 tG~~i~vDGG~sl  252 (261)
T d1geea_         240 TGITLFADGGMTL  252 (261)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCeEEECCCeeC
Confidence            5799999888643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.49  E-value=0.0041  Score=47.52  Aligned_cols=132  Identities=10%  Similarity=0.051  Sum_probs=77.7

Q ss_pred             cCccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.++.+++.|  +.++..+.+++    .+.+-.++|++||...+.....           ....|+++|...     
T Consensus       103 ~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~-----------~~~~Y~asKaal~~lt~  169 (268)
T d2bgka1         103 AGNEDFKRVMDIN--VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-----------VSHVYTATKHAVLGLTT  169 (268)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-----------SCHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHh--hcchhhhhhhhcchHhhcCCCCccccccccccccccc-----------cccccchhHHHHHhCHH
Confidence            3445677777788  77766666555    4445568999998664422111           113466666432     


Q ss_pred             -------hhCCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CC
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-AS  143 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~  143 (255)
                             .+++.+..+.||.|-.+.....  .-............ ...      .-+...+|+|+++..++..... ..
T Consensus       170 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~------gr~~~pedvA~~v~fL~S~~s~~it  242 (268)
T d2bgka1         170 SLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA-NLK------GTLLRAEDVADAVAYLAGDESKYVS  242 (268)
T ss_dssp             HHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC-SSC------SCCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcc-ccC------CCCcCHHHHHHHHHHHhChhhCCcc
Confidence                   2389999999999876643321  11122222211111 111      1256789999999999875433 45


Q ss_pred             CCEEEecCCCc
Q 025270          144 SNIFNLVSDRA  154 (255)
Q Consensus       144 ~~~~~i~~~~~  154 (255)
                      |+++.+.+|..
T Consensus       243 Gq~i~VDGG~t  253 (268)
T d2bgka1         243 GLNLVIDGGYT  253 (268)
T ss_dssp             SCEEEESTTGG
T ss_pred             CceEEECcCcc
Confidence            79999988753

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.36  E-value=0.0021  Score=49.01  Aligned_cols=128  Identities=8%  Similarity=0.061  Sum_probs=76.4

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---   74 (255)
                      +.+.+.|+.+++.|  +.++..+.+++.    +.+-.++|++||...+....            ....|.++|....   
T Consensus       101 ~~~~~~~~~~~~vn--l~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~------------~~~~Y~asKaal~~lt  166 (260)
T d1zema1         101 DYPSDDFARVLTIN--VTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP------------NMAAYGTSKGAIIALT  166 (260)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT------------TBHHHHHHHHHHHHHH
T ss_pred             cccHHHHHhhcccc--ccccccchhhHHhhhhhhcCCCCCeeechhhccCCc------------chHHHHHHHHHHHHHH
Confidence            34556677777778  777766666654    33446899999976543211            1256777775432   


Q ss_pred             ---------hCCceEEEecCcccCCCC---------------CCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHH
Q 025270           75 ---------NFSNWASFRPQYMIGSGN---------------NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSS  130 (255)
Q Consensus        75 ---------~~~~~~ilRp~~v~G~~~---------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~  130 (255)
                               +|+.+..+.||.|--+..               .......+...+....++         .-+...+|+|.
T Consensus       167 k~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------~R~g~pedvA~  237 (260)
T d1zema1         167 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM---------RRYGDINEIPG  237 (260)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT---------SSCBCGGGSHH
T ss_pred             HHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence                     379999999998854311               000111222222222211         11567899999


Q ss_pred             HHHHHhcCCCc-CCCCEEEecCC
Q 025270          131 MLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus       131 ~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      ++..++..... ..|+++.+.+|
T Consensus       238 ~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         238 VVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHhCchhcCccCCeEEeCCC
Confidence            99999875433 35788877654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.35  E-value=0.0014  Score=49.84  Aligned_cols=129  Identities=13%  Similarity=0.061  Sum_probs=75.3

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCc-ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI----   72 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v-~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~----   72 (255)
                      +.+.+.|+.+++.|  +.++..+.+++.    +.+. .++|++||...+-...            ....|.++|..    
T Consensus       100 ~~~~~~~~~~~~vn--l~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~l  165 (251)
T d1zk4a1         100 ETTTAEWRKLLAVN--LDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP------------SLGAYNASKGAVRIM  165 (251)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHH
T ss_pred             cccccchhhhcccc--ccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC------------CchhHHHHHHHHhcc
Confidence            45566677788888  777777766654    4443 3789999976442211            12456655532    


Q ss_pred             -----H-----hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           73 -----S-----ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        73 -----~-----e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                           .     .+++.+..+.||.|-.+......-........  ...++       .-+...+|+|.++..++..... 
T Consensus       166 t~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~--~~~pl-------~R~~~pedvA~~v~fL~S~~s~~  236 (251)
T d1zk4a1         166 SKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQR--TKTPM-------GHIGEPNDIAYICVYLASNESKF  236 (251)
T ss_dssp             HHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTST--TTCTT-------SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHH--hCCCC-------CCCcCHHHHHHHHHHHhCchhCC
Confidence                 1     23789999999988543211111011111111  11111       1256889999999998875443 


Q ss_pred             CCCCEEEecCCC
Q 025270          142 ASSNIFNLVSDR  153 (255)
Q Consensus       142 ~~~~~~~i~~~~  153 (255)
                      ..|+++.+.+|.
T Consensus       237 itG~~i~vDGG~  248 (251)
T d1zk4a1         237 ATGSEFVVDGGY  248 (251)
T ss_dssp             CCSCEEEESTTG
T ss_pred             CcCcEEEECccc
Confidence            357899888774

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.34  E-value=0.0023  Score=48.77  Aligned_cols=129  Identities=9%  Similarity=0.088  Sum_probs=78.9

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.|+.++++|  +.++..+.+++.    +.+-.++|++||....-..            +....|.++|...     
T Consensus       103 ~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~~~~~Y~asKaal~~lt~  168 (258)
T d1iy8a_         103 FTAAEFDKVVSIN--LRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI------------GNQSGYAAAKHGVVGLTR  168 (258)
T ss_dssp             SCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC------------SSBHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHhhhh--ccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC------------CCchHHHHHHHHHHHHHH
Confidence            4556777888888  777777776653    3344589999997644211            1225677777542     


Q ss_pred             -------hhCCceEEEecCcccCCCCCC-------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           74 -------ENFSNWASFRPQYMIGSGNNK-------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                             .+++.+..+.||.+..+....       .........+....++         .-+...+|+|+++..++...
T Consensus       169 ~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         169 NSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---------KRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCch
Confidence                   238999999999885431100       0011122222222111         12567899999999999754


Q ss_pred             Cc-CCCCEEEecCCCc
Q 025270          140 EA-ASSNIFNLVSDRA  154 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~~  154 (255)
                      .. ..|+++.+.+|..
T Consensus       240 s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         240 ASYVNATVVPIDGGQS  255 (258)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hcCCcCceEEcCcchh
Confidence            33 4578999988864

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.30  E-value=0.0035  Score=47.50  Aligned_cols=125  Identities=7%  Similarity=-0.006  Sum_probs=73.2

Q ss_pred             ccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------   74 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----------   74 (255)
                      .++..+++|  +.+...+..++...  .-.++|++||........            ....|.++|...+          
T Consensus       113 ~~~~~~~vn--~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~ltr~lA~el  178 (256)
T d1ulua_         113 DWLLALEVS--AYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP------------KYNVMAIAKAALEASVRYLAYEL  178 (256)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHhhhhh--HHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC------------CchHHHHHHHHHHHHHHHHHHHh
Confidence            344555666  88888888777643  124799999866543211            1256777775432          


Q ss_pred             --hCCceEEEecCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEec
Q 025270           75 --NFSNWASFRPQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLV  150 (255)
Q Consensus        75 --~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~  150 (255)
                        +|+.+..+.||.+..+...... .......+.+..++         .-+...+|+|+++..++..... ..|+++.+.
T Consensus       179 a~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~~s~~itG~~i~VD  249 (256)
T d1ulua_         179 GPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVGNLGLFLLSPLASGITGEVVYVD  249 (256)
T ss_dssp             GGGTCEEEEEEECCC----------CHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCchhCCccCCeEEEC
Confidence              3899999999988665433221 12233333332221         1145789999999999875443 357899888


Q ss_pred             CCCc
Q 025270          151 SDRA  154 (255)
Q Consensus       151 ~~~~  154 (255)
                      +|..
T Consensus       250 GG~~  253 (256)
T d1ulua_         250 AGYH  253 (256)
T ss_dssp             TTGG
T ss_pred             cCEe
Confidence            8754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.26  E-value=0.0022  Score=48.87  Aligned_cols=132  Identities=13%  Similarity=0.068  Sum_probs=74.0

Q ss_pred             cCccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.|+.++++|  +.++..+.+++    ++.+-.++|++||........            ....|.++|....    
T Consensus       102 ~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt~  167 (260)
T d1x1ta1         102 FPTEKWDAILALN--LSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA------------NKSAYVAAKHGVVGFTK  167 (260)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             hhHHhhhhhhhcc--ccccccccchhhhhHhhcCCceEeecccccceeccC------------CcchhhhhhhhHHHhHH
Confidence            4556677777888  76666655554    444556899999976543211            1256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCe-------eccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-------PIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                              +|+.+..+.||.|--+....     .+.........       ..........-+...+|+|.++..++...
T Consensus       168 ~lA~el~~~gIrVN~I~PG~i~T~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~  242 (260)
T d1x1ta1         168 VTALETAGQGITANAICPGWVRTPLVEK-----QISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDA  242 (260)
T ss_dssp             HHHHHHTTTTEEEEEEEECCBCC-----------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHhchhCcEEEEEecCCCCChhhhh-----hhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence                    37899999999885442211     11111000000       00000000112578999999999998754


Q ss_pred             Cc-CCCCEEEecCCC
Q 025270          140 EA-ASSNIFNLVSDR  153 (255)
Q Consensus       140 ~~-~~~~~~~i~~~~  153 (255)
                      .. ..|+++.+.+|-
T Consensus       243 a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         243 AAQITGTTVSVDGGW  257 (260)
T ss_dssp             GTTCCSCEEEESTTG
T ss_pred             hCCCcCCEEEECcch
Confidence            43 457899888774

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.15  E-value=0.0017  Score=50.64  Aligned_cols=117  Identities=9%  Similarity=0.032  Sum_probs=72.7

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEecccccc-CCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIY-KPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy-~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      +.+.+.|+.++++|  +.++..+.+++.    +.+-.++|++||.... +...             ...|+++|....  
T Consensus       108 ~~~~e~~~~~~~vN--l~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~-------------~~~Y~asKaal~~l  172 (302)
T d1gz6a_         108 RISDEDWDIIQRVH--LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG-------------QANYSAAKLGLLGL  172 (302)
T ss_dssp             GCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------CHHHHHHHHHHHHH
T ss_pred             hCCHHHHhhhhcee--ehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC-------------cHHHHHHHHHHHHH
Confidence            34556677788888  777666666544    4455689999997643 3321             256777775432  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCC
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS  144 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  144 (255)
                                +|+.+..+.||.+--+...  ..+                  ......+..+|+|.+++.++.......|
T Consensus       173 t~~la~E~~~~gIrVN~I~PG~~~t~~~~--~~~------------------~~~~~~~~PedvA~~v~fL~S~~a~itG  232 (302)
T d1gz6a_         173 ANTLVIEGRKNNIHCNTIAPNAGSRMTET--VMP------------------EDLVEALKPEYVAPLVLWLCHESCEENG  232 (302)
T ss_dssp             HHHHHHHTGGGTEEEEEEEEECCSTTTGG--GSC------------------HHHHHHSCGGGTHHHHHHHTSTTCCCCS
T ss_pred             HHHHHHHHhccCCceeeeCCCCCCcchhh--cCc------------------HhhHhcCCHHHHHHHHHHHcCCCcCCCC
Confidence                      3889999999865221110  000                  0111234468999999998864444567


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       233 ~~i~vdGG~  241 (302)
T d1gz6a_         233 GLFEVGAGW  241 (302)
T ss_dssp             CEEEEETTE
T ss_pred             cEEEeCCCc
Confidence            888888764

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.14  E-value=0.0043  Score=47.00  Aligned_cols=106  Identities=13%  Similarity=0.078  Sum_probs=65.5

Q ss_pred             ccceEEecccCcccHHHHHHHHhhCCcceEEEeccccc-cCCCCCCCCCCCCCCCCCCChhHHHHHHH--------hhCC
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYIS--------ENFS   77 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~~~v~r~i~~Ss~~v-y~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------e~~~   77 (255)
                      .++.+++.|  +.++.++.++++..+..++|++||... ++...             ...|++.|...        ..|+
T Consensus       112 ~~~~~~~~~--~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~-------------~~~YaAaka~l~~la~~~~~~Gi  176 (259)
T d2fr1a1         112 RIERASRAK--VLGARNLHELTRELDLTAFVLFSSFASAFGAPG-------------LGGYAPGNAYLDGLAQQRRSDGL  176 (259)
T ss_dssp             HHHHHTHHH--HHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-------------CTTTHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhhhh--ccchhHHHHHhhccCCceEeeecchhhccCCcc-------------cHHHHHHHHhHHHHHHHHHhCCC
Confidence            344455555  899999999988877788999999764 34322             13466555433        2389


Q ss_pred             ceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           78 NWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        78 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                      +++.+.||.+.+.+....    .....+.       ..|   ...+..+++++++..++.+...
T Consensus       177 ~v~~I~pg~~~~~g~~~~----~~~~~~~-------~~G---~~~~~~~~~~~~l~~~l~~~~~  226 (259)
T d2fr1a1         177 PATAVAWGTWAGSGMAEG----PVADRFR-------RHG---VIEMPPETACRALQNALDRAEV  226 (259)
T ss_dssp             CCEEEEECCBC----------------CT-------TTT---EECBCHHHHHHHHHHHHHTTCS
T ss_pred             CEEECCCCcccCCccccc----hHHHHHH-------hcC---CCCCCHHHHHHHHHHHHhCCCc
Confidence            999999998876543221    0111111       011   2356789999999999987764

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.09  E-value=0.0041  Score=47.19  Aligned_cols=129  Identities=16%  Similarity=0.133  Sum_probs=79.7

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHhh------CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAKS------SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~~------~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-   74 (255)
                      +++.+.++.++++|  +.++..+.+++..      .+-.++|.+||...+....            ....|.++|.... 
T Consensus        97 ~~~~e~~~~~~~vN--l~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~------------~~~~Y~asKaal~~  162 (257)
T d2rhca1          97 ELADELWLDVVETN--LTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV------------HAAPYSASKHGVVG  162 (257)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHH
T ss_pred             HcCHHHHHHHHHHH--hhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc------------cchhHHHHHHHHHH
Confidence            45566778888888  9999999888753      2445799998876543211            1256777775432 


Q ss_pred             -----------hCCceEEEecCcccCCCCCC----------CcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHH
Q 025270           75 -----------NFSNWASFRPQYMIGSGNNK----------DCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLT  133 (255)
Q Consensus        75 -----------~~~~~~ilRp~~v~G~~~~~----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~  133 (255)
                                 +++.+..+.||.|--+....          .........+....+  +       .-+...+|+|.++.
T Consensus       163 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~P--l-------gR~~~pedia~~v~  233 (257)
T d2rhca1         163 FTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP--I-------GRYVQPSEVAEMVA  233 (257)
T ss_dssp             HHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTST--T-------SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCC--C-------CCCcCHHHHHHHHH
Confidence                       26889999999874321000          011122223332211  1       12568999999999


Q ss_pred             HHhcCCCc-CCCCEEEecCCC
Q 025270          134 LAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       134 ~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      .++..... ..|+++.+.+|-
T Consensus       234 fL~S~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         234 YLIGPGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhcCCcCceEEECcCc
Confidence            99964433 457889888763

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.005  Score=46.35  Aligned_cols=129  Identities=11%  Similarity=0.114  Sum_probs=76.9

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh-----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~-----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---   73 (255)
                      +.+.+.++.+++.|  +.++..+.+++.     +.+-.++|++||........            ....|+.+|...   
T Consensus        94 ~~~~~~~~~~~~vn--l~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~l  159 (244)
T d1pr9a_          94 EVTKEAFDRSFEVN--LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT------------NHSVYCSTKGALDML  159 (244)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHh--hhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc------------chhhhhhhHHHHHHH
Confidence            34556677777777  766666555443     23446899999976543211            124577666432   


Q ss_pred             ---------hhCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 ---------ENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 ---------e~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                               ..++.+..+.||.|--+..... .-......+....+  +       .-+...+|+|.++..++..... .
T Consensus       160 t~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p--l-------~R~~~peevA~~v~fL~S~~a~~i  230 (244)
T d1pr9a_         160 TKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIP--L-------GKFAEVEHVVNAILFLLSDRSGMT  230 (244)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCT--T-------CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCchhCCc
Confidence                     2389999999998854421110 01122233333221  1       1256899999999998875443 4


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++.+.+|.
T Consensus       231 tG~~i~vDGG~  241 (244)
T d1pr9a_         231 TGSTLPVEGGF  241 (244)
T ss_dssp             CSCEEEESTTG
T ss_pred             CCcEEEECccH
Confidence            57889888764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=95.95  E-value=0.003  Score=48.11  Aligned_cols=128  Identities=12%  Similarity=0.143  Sum_probs=77.3

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.++.++++|  +.++..+.+++.    +.+-.++|++||........            ....|.++|....    
T Consensus       105 ~~~e~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~lt~  170 (259)
T d2ae2a_         105 YTVEDYSLIMSIN--FEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP------------YEAVYGATKGAMDQLTR  170 (259)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhcc--cceeEEEEeeccchhhhhcccccccccccccccccc------------cccchHHHHHHHHHHHH
Confidence            4455677777888  777766666554    44456899999976442211            1256777765322    


Q ss_pred             --------hCCceEEEecCcccCCCCCC---C-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-
Q 025270           75 --------NFSNWASFRPQYMIGSGNNK---D-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-  141 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~---~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-  141 (255)
                              .++.+..+.||.|--+....   . .....+..+....++       .  -+...+|+|.++..++..... 
T Consensus       171 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl-------~--R~g~pedvA~~v~fL~S~~s~~  241 (259)
T d2ae2a_         171 CLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-------R--RMGEPKELAAMVAFLCFPAASY  241 (259)
T ss_dssp             HHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT-------C--SCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHHHhCchhCC
Confidence                    37899999999884331100   0 111223333333221       1  156789999999998875443 


Q ss_pred             CCCCEEEecCCC
Q 025270          142 ASSNIFNLVSDR  153 (255)
Q Consensus       142 ~~~~~~~i~~~~  153 (255)
                      ..|+++.+.+|-
T Consensus       242 itG~~i~VDGG~  253 (259)
T d2ae2a_         242 VTGQIIYVDGGL  253 (259)
T ss_dssp             CCSCEEEESTTG
T ss_pred             CcCcEEEECCCe
Confidence            357899888774

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.91  E-value=0.0055  Score=45.97  Aligned_cols=106  Identities=12%  Similarity=0.070  Sum_probs=66.7

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.++.++++|  +.++..+.+++.    +.+-.++|++||...+....            ....|.++|....    
T Consensus       104 ~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~------------~~~~Y~asK~al~~lt~  169 (240)
T d2bd0a1         104 LTEEDFDYTMNTN--LKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR------------HSSIYCMSKFGQRGLVE  169 (240)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHhhcCCEe--ehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCC------------CChHHHHHHHHHHHHHH
Confidence            4556677778888  776666555554    44456899999976543211            1256777774322    


Q ss_pred             --------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                              .|+.+..+.||.+--+....                 +.  ......+...+|+|++++.++.++..
T Consensus       170 ~la~el~~~gIrvn~i~PG~v~T~~~~~-----------------~~--~~~~~~~~~PedvA~~v~~l~s~~~~  225 (240)
T d2bd0a1         170 TMRLYARKCNVRITDVQPGAVYTPMWGK-----------------VD--DEMQALMMMPEDIAAPVVQAYLQPSR  225 (240)
T ss_dssp             HHHHHHTTTTEEEEEEEECCBCSTTTCC-----------------CC--STTGGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHhCcCCeEEEEeeeCcccCchhhh-----------------cC--HhhHhcCCCHHHHHHHHHHHHcCCcc
Confidence                    37899999999885442111                 00  11112245679999999999987654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.89  E-value=0.015  Score=43.83  Aligned_cols=134  Identities=5%  Similarity=-0.037  Sum_probs=77.2

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hC-CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SS-GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~-~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---   73 (255)
                      +.+.+.|+.+++.|  +.++.++.+++.    +. +-.++|++||...+....            ....|.++|...   
T Consensus        96 ~~~~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~l  161 (255)
T d1gega_          96 SITPEIVDKVYNIN--VKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------------ELAVYSSSKFAVRGL  161 (255)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHH
T ss_pred             Hhhhhhhhhhhhhc--ccchhhhhhhhcchhhhhccccccccccchhhcccCc------------ccccchhCHHHHHhh
Confidence            34566677788888  888777776653    22 335799999876442211            225677777542   


Q ss_pred             ---------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHc--CCCee----ccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           74 ---------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVR--KRPVP----IPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        74 ---------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~--~~~~~----i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                               .+|+.+..+.||.+-.+     ....+......  +....    -........-+...+|+|+++..++..
T Consensus       162 tk~lA~el~~~gIrVN~I~PG~i~T~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~  236 (255)
T d1gega_         162 TQTAARDLAPLGITVNGYCPGIVKTP-----MWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASP  236 (255)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBSSH-----HHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHhhhhCcEEEEEecCcccCh-----HHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence                     23899999999977432     11111111110  00000    000000011256789999999999874


Q ss_pred             CCc-CCCCEEEecCCCc
Q 025270          139 PEA-ASSNIFNLVSDRA  154 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~~  154 (255)
                      ... ..|+++.+.+|-.
T Consensus       237 ~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         237 DSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             GGTTCCSCEEEESSSSS
T ss_pred             hhCCccCcEEEecCCEE
Confidence            433 3578998888753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.89  E-value=0.0023  Score=48.22  Aligned_cols=129  Identities=15%  Similarity=0.115  Sum_probs=77.5

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh--
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE--   74 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e--   74 (255)
                      +.+.+.++.++++|  +.++..+.+++..     .+-.++|++||........            ....|.+.|....  
T Consensus        92 ~~~~~~~~~~~~vn--l~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------~~~~Y~asKaal~~l  157 (242)
T d1cyda_          92 EVTKEAFDRSFSVN--LRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP------------NLITYSSTKGAMTML  157 (242)
T ss_dssp             GCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH--hccchHHHHHhchhhhhhcccCcccccchhhccccCC------------ccccccchHHHHHHH
Confidence            34556677777777  8887777765542     2335799999976543211            1256777775432  


Q ss_pred             ----------hCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 ----------NFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 ----------~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                                +++.+..+.||.+-.+..... .-..+...+....+  +       .-+...+|+|+++..++..... .
T Consensus       158 t~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~p--l-------~R~~~peeva~~v~fL~S~~s~~i  228 (242)
T d1cyda_         158 TKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP--L-------RKFAEVEDVVNSILFLLSDRSAST  228 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST--T-------SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHHHhCchhcCc
Confidence                      378999999998754311000 00122223322211  1       1256789999999998865433 4


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++.+.+|.
T Consensus       229 tG~~i~vDGG~  239 (242)
T d1cyda_         229 SGGGILVDAGY  239 (242)
T ss_dssp             CSSEEEESTTG
T ss_pred             CCceEEeCcch
Confidence            57899888774

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0058  Score=46.14  Aligned_cols=129  Identities=9%  Similarity=-0.045  Sum_probs=77.4

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-----   73 (255)
                      .+.+.|+.+++.|  +.++..+.+++.    +.+ .++|++||........            ....|.++|...     
T Consensus        99 ~~~~~~~~~~~vN--l~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~lt~  163 (250)
T d1ydea1          99 TSAQGFRQLLELN--LLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQA------------QAVPYVATKGAVTAMTK  163 (250)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHh--hhhHHHHHHHhhHHHHhCC-CCCccccccccccccc------------CcchhHHHHhhHHHHHH
Confidence            4456677788888  777776666655    333 4899999976542211            125677777542     


Q ss_pred             -------hhCCceEEEecCcccCCCC-----CCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           74 -------ENFSNWASFRPQYMIGSGN-----NKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        74 -------e~~~~~~ilRp~~v~G~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                             .+++.+..+.||.|--+..     ...-....+.......++         .-+...+|+|.++..++....-
T Consensus       164 ~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eva~~v~fL~Sda~~  234 (250)
T d1ydea1         164 ALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGAAAVFLASEANF  234 (250)
T ss_dssp             HHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCccCC
Confidence                   2389999999998843210     000011122222222211         1256889999999998863222


Q ss_pred             CCCCEEEecCCCcc
Q 025270          142 ASSNIFNLVSDRAV  155 (255)
Q Consensus       142 ~~~~~~~i~~~~~~  155 (255)
                      ..|+++.+.+|..+
T Consensus       235 itG~~i~vDGG~~l  248 (250)
T d1ydea1         235 CTGIELLVTGGAEL  248 (250)
T ss_dssp             CCSCEEEESTTTTS
T ss_pred             CcCCeEEECCCccc
Confidence            45789998887543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=95.86  E-value=0.0048  Score=46.79  Aligned_cols=130  Identities=11%  Similarity=0.065  Sum_probs=77.5

Q ss_pred             cCccccceEEecccCcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      ++.+.++.+++.|  +.++..+.+++..     .+-.++|++||........            ....|.++|...    
T Consensus        98 ~~~~~~~~~~~vN--l~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt  163 (256)
T d1k2wa_          98 ITRESYDRLFAIN--VSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA------------LVGVYCATKAAVISLT  163 (256)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhhhcee--eeccccchhhccchhHHhccCCccccccchhhccccc------------cccchhhhhhHHHHHH
Confidence            4556677777888  8887777765432     2345899999976543211            125677666432    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHH-----------HHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHH
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEE-----------WFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTL  134 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~  134 (255)
                              .+|+.+..+.||.+-.+.... ...           .....+....+  +       .-+...+|+|.++..
T Consensus       164 ~~lA~el~~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P--l-------gR~~~p~evA~~v~f  233 (256)
T d1k2wa_         164 QSAGLNLIRHGINVNAIAPGVVDGEHWDG-VDAKFADYENLPRGEKKRQVGAAVP--F-------GRMGRAEDLTGMAIF  233 (256)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBCCTTHHH-HHHHHHHHHTCCTTHHHHHHHHHST--T-------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHhcccCeEEEEEecCCCCchhhhh-hhhhhhhhccCChHHHHHHHHhcCC--C-------CCCcCHHHHHHHHHH
Confidence                    238999999999775542111 000           01111111111  1       125678999999999


Q ss_pred             HhcCCCc-CCCCEEEecCCCccC
Q 025270          135 AVENPEA-ASSNIFNLVSDRAVT  156 (255)
Q Consensus       135 ~l~~~~~-~~~~~~~i~~~~~~s  156 (255)
                      ++..... ..|+.+.+.+|..+|
T Consensus       234 L~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         234 LATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             TTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCchhCCccCceEEECcchhhC
Confidence            8864433 357899998886554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.0025  Score=49.61  Aligned_cols=128  Identities=13%  Similarity=0.088  Sum_probs=75.2

Q ss_pred             cCccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.++.++++|  +.++..+.+++..    .+-.++|.+||....+.+             ....|..+|....    
T Consensus       113 ~~~e~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~-------------~~~~Y~asKaal~~ltk  177 (297)
T d1yxma1         113 ISSKGWHAVLETN--LTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP-------------LAVHSGAARAGVYNLTK  177 (297)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT-------------TCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhccc--ccchhhHHHHHHHhhcccccccccccccccccccc-------------ccccchhHHHHHHHHHH
Confidence            4455677777778  8888777776653    334568877764332211             1245666664322    


Q ss_pred             --------hCCceEEEecCcccCCCCCCC---cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKD---CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                              +|+.+..+.||.|..+.....   ....+.......    ++   .  .-+...+|+|.++..++..... .
T Consensus       178 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~----~p---l--gR~g~pedvA~~v~fL~Sd~s~~i  248 (297)
T d1yxma1         178 SLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----IP---A--KRIGVPEEVSSVVCFLLSPAASFI  248 (297)
T ss_dssp             HHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----ST---T--SSCBCTHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc----CC---C--CCCcCHHHHHHHHHHHhCchhcCc
Confidence                    379999999998865432111   001111111111    11   0  1256789999999999975443 4


Q ss_pred             CCCEEEecCCCc
Q 025270          143 SSNIFNLVSDRA  154 (255)
Q Consensus       143 ~~~~~~i~~~~~  154 (255)
                      .|+++.+.+|..
T Consensus       249 TG~~i~VDGG~s  260 (297)
T d1yxma1         249 TGQSVDVDGGRS  260 (297)
T ss_dssp             CSCEEEESTTGG
T ss_pred             CCcEEEeCcChh
Confidence            579999988863

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0086  Score=44.95  Aligned_cols=120  Identities=11%  Similarity=0.091  Sum_probs=68.3

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC----------CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS----------GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~----------~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-   74 (255)
                      +.++.+++.|  +.++.++..++...          +-.++|++||...+....            ....|+++|...+ 
T Consensus       107 ~~~~~~~~vn--l~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~  172 (248)
T d2o23a1         107 EDFQRVLDVN--LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV------------GQAAYSASKGGIVG  172 (248)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHH
T ss_pred             HHHHHHHhHH--HHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC------------CchHHHHHHHHHHH
Confidence            4456666777  88888888877432          224799999977543211            1256777765432 


Q ss_pred             -----------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCC
Q 025270           75 -----------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAAS  143 (255)
Q Consensus        75 -----------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~  143 (255)
                                 +++.+..+.||.+--+.... ....+........  ++.+      -+...+|+|+++..+++.+ -..
T Consensus       173 lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~--pl~~------R~g~peevA~~v~fL~s~~-~it  242 (248)
T d2o23a1         173 MTLPIARDLAPIGIRVMTIAPGLFGTPLLTS-LPEKVCNFLASQV--PFPS------RLGDPAEYAHLVQAIIENP-FLN  242 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTC--SSSC------SCBCHHHHHHHHHHHHHCT-TCC
T ss_pred             HHHHHHHHhcccCcceeeeccCceecchhhc-CCHHHHHHHHhcC--CCCC------CCcCHHHHHHHHHHHHhCC-CCC
Confidence                       37999999999886543221 1111111222211  1111      1557899999999998743 234


Q ss_pred             CCEEEe
Q 025270          144 SNIFNL  149 (255)
Q Consensus       144 ~~~~~i  149 (255)
                      |++.++
T Consensus       243 Gq~I~v  248 (248)
T d2o23a1         243 GEVIRL  248 (248)
T ss_dssp             SCEEEE
T ss_pred             ceEeEC
Confidence            566653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.29  E-value=0.004  Score=47.19  Aligned_cols=132  Identities=9%  Similarity=0.055  Sum_probs=73.3

Q ss_pred             ccCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      +.+.+.|+.++++|  +.++..+.+++.    +.+ .++|++||....-...            ....|..+|...    
T Consensus        98 ~~~~~~~~~~~~vN--l~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt  162 (253)
T d1hxha_          98 TGRLEDFSRLLKIN--TESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE------------QYAGYSASKAAVSALT  162 (253)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT------------TBHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHh--hhHHHHHHHHHHHHHHhcC-CceecccchhhhcCcc------------ccccccchhHHHHHHH
Confidence            34456677777888  766666555544    334 6899999976542211            124677666432    


Q ss_pred             -----h-----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-C
Q 025270           74 -----E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-A  142 (255)
Q Consensus        74 -----e-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~  142 (255)
                           |     +++.+..+-||.|-.+................... ..    ...--+...+|+|++++.++..... .
T Consensus       163 ~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~~----~~~gr~~~pedvA~~v~fL~S~~s~~i  237 (253)
T d1hxha_         163 RAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP-KL----NRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT-TT----BTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCc-cc----cccCCCCCHHHHHHHHHHHhChhhCCC
Confidence                 2     13788899999875431000000000011111110 00    0111367889999999999875433 4


Q ss_pred             CCCEEEecCCC
Q 025270          143 SSNIFNLVSDR  153 (255)
Q Consensus       143 ~~~~~~i~~~~  153 (255)
                      .|+++++-+|-
T Consensus       238 tG~~i~VDGG~  248 (253)
T d1hxha_         238 SGSELHADNSI  248 (253)
T ss_dssp             CSCEEEESSSC
T ss_pred             cCcEEEECccH
Confidence            57889887763

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0053  Score=47.35  Aligned_cols=118  Identities=11%  Similarity=0.028  Sum_probs=66.2

Q ss_pred             cCccccceEEecccCcccHHHHHHHH----hhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.++.++++|  +.++.++.+++    ++.+-.++|++||....-...            ....|.++|...+    
T Consensus       102 ~~~e~~~~~~~vN--~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~------------~~~~Y~asKaal~~l~~  167 (285)
T d1jtva_         102 LGEDAVASVLDVN--VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP------------FNDVYCASKFALEGLCE  167 (285)
T ss_dssp             SCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             hhHhhhhhhhhcc--hhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC------------CchHHHHHHHHHHHHHH
Confidence            3445566677777  77766666654    445556899999976442211            2256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCC--------------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHH
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKD--------------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSML  132 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~--------------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~  132 (255)
                              +|+.+..+.||.|--+.....              ....+...+.......       .......+|+|+++
T Consensus       168 ~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~PeeVA~~v  240 (285)
T d1jtva_         168 SLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-------REAAQNPEEVAEVF  240 (285)
T ss_dssp             HHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-------HHHCBCHHHHHHHH
T ss_pred             HHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh-------cccCCCHHHHHHHH
Confidence                    389999999998843321110              0000111111111000       01245679999999


Q ss_pred             HHHhcCCCc
Q 025270          133 TLAVENPEA  141 (255)
Q Consensus       133 ~~~l~~~~~  141 (255)
                      +.++..+.+
T Consensus       241 ~~~~~~~~p  249 (285)
T d1jtva_         241 LTALRAPKP  249 (285)
T ss_dssp             HHHHHCSSC
T ss_pred             HHHHhCCCC
Confidence            999987764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.01  E-value=0.01  Score=45.01  Aligned_cols=126  Identities=11%  Similarity=0.075  Sum_probs=69.0

Q ss_pred             ccccceEEecccCcccHHHHHHHHhh----CCcceEEEeccc-cccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISSA-GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss~-~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      .+.|+.+++.|  +.++..+.+++..    .+ .++|.++|. +.....            +....|.++|....     
T Consensus       110 ~e~~~~~~~vN--l~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~------------~~~~~Y~asKaal~~lt~~  174 (264)
T d1spxa_         110 IESYDATLNLN--LRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------------PDFPYYSIAKAAIDQYTRN  174 (264)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC------------TTSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh--HHHHHHHHhhhCCcccccc-CcceeeeeeccccccC------------CCchhhhhhhhhHHHHHHH
Confidence            34566777777  7776666666553    33 345555553 322111            11245776665432     


Q ss_pred             -------hCCceEEEecCcccCCCCCCC--------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC
Q 025270           75 -------NFSNWASFRPQYMIGSGNNKD--------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP  139 (255)
Q Consensus        75 -------~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~  139 (255)
                             +|+.+..+.||.|--+.....        ........+....+  +     .  -+...+|+|.++..++..+
T Consensus       175 lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P--l-----~--R~g~pedvA~~v~fL~S~~  245 (264)
T d1spxa_         175 TAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--A-----G--VMGQPQDIAEVIAFLADRK  245 (264)
T ss_dssp             HHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT--T-----S--SCBCHHHHHHHHHHHHCHH
T ss_pred             HHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCC--C-----C--CCcCHHHHHHHHHHHhCCc
Confidence                   389999999998854422111        01111111111111  1     1  1567899999999998643


Q ss_pred             -Cc-CCCCEEEecCCCc
Q 025270          140 -EA-ASSNIFNLVSDRA  154 (255)
Q Consensus       140 -~~-~~~~~~~i~~~~~  154 (255)
                       .. ..|+++.+.+|..
T Consensus       246 ~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         246 TSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHTTCCSCEEEESTTGG
T ss_pred             ccCCccCceEEeCCChh
Confidence             22 4578998887753

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.0086  Score=45.00  Aligned_cols=130  Identities=8%  Similarity=-0.031  Sum_probs=77.3

Q ss_pred             cCccccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----   74 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e----   74 (255)
                      .+.+.++..+++|  +.++..+.+++.    +.+-.++|++||...--.           ..+....|+..|...+    
T Consensus        93 ~~~~~~~~~~~vn--~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------~~~~~~~Y~~sKaal~~l~r  159 (245)
T d2ag5a1          93 CEEKDWDFSMNLN--VRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK-----------GVVNRCVYSTTKAAVIGLTK  159 (245)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-----------CCTTBHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh--hccchhHHHhhCcccccCCCceeeeeechhhccC-----------CccchhHHHHHHHHHHHHHH
Confidence            4556677777777  777776666554    334568999988542100           0012256777775432    


Q ss_pred             --------hCCceEEEecCcccCCCCCCC-----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           75 --------NFSNWASFRPQYMIGSGNNKD-----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        75 --------~~~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                              .|+.+..+.||.|-.+.....     ....+...+....++         .-+...+|+|+++..++.....
T Consensus       160 ~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         160 SVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhChhhC
Confidence                    289999999998855421110     111122222222211         1267889999999999985543


Q ss_pred             -CCCCEEEecCCCc
Q 025270          142 -ASSNIFNLVSDRA  154 (255)
Q Consensus       142 -~~~~~~~i~~~~~  154 (255)
                       ..|+++.+.+|..
T Consensus       231 ~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         231 YVTGNPVIIDGGWS  244 (245)
T ss_dssp             TCCSCEEEECTTGG
T ss_pred             CCcCceEEeCCCcC
Confidence             4578999888753

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.048  Score=40.79  Aligned_cols=116  Identities=11%  Similarity=0.026  Sum_probs=69.1

Q ss_pred             cccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------------hCCceEEEe
Q 025270           18 FRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFR   83 (255)
Q Consensus        18 ~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------------~~~~~~ilR   83 (255)
                      ..+...+..++...  +-+.+|++||.......            |....|..+|...+            +++.+..++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~------------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~  187 (258)
T d1qsga_         120 SYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAIS  187 (258)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred             HHHHHHHHHHHHHhccCCcEEEEecchhhccCC------------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccc
Confidence            66666666666543  22458888886532211            11245777765433            279999999


Q ss_pred             cCcccCCCCCCCc-HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCc
Q 025270           84 PQYMIGSGNNKDC-EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  154 (255)
Q Consensus        84 p~~v~G~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~  154 (255)
                      ||.|..+...... ............+  +   +    -+...+|+|.++..++..... .+|+++.+.+|..
T Consensus       188 PG~i~T~~~~~~~~~~~~~~~~~~~~p--l---~----R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         188 AGPIRTLAASGIKDFRKMLAHCEAVTP--I---R----RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             ECCCCCTTGGGSTTHHHHHHHHHHHST--T---S----SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccccccccccccchhhhHHHHHHhCCC--C---C----CCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence            9999765433221 1222222222211  1   1    156789999999999975443 4678999888754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.29  E-value=0.05  Score=40.88  Aligned_cols=121  Identities=11%  Similarity=0.029  Sum_probs=68.8

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC----C--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-----
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS----G--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~----~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-----   74 (255)
                      +.++.++++|  +.++..+.+++...    +  -.++|++||...+....            ....|+++|....     
T Consensus       117 ~~~~~~~~vN--~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt~~  182 (259)
T d1oaaa_         117 AEVNNYWALN--LTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK------------GWGLYCAGKAARDMLYQV  182 (259)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHh--hhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCc------------cchHHHHHHHHHHHHHHH
Confidence            3455666777  88888888877643    2  35799999976543211            1256777775432     


Q ss_pred             -----hCCceEEEecCcccCCCCCCC----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                           .++.+..+.||.|-.+.....    ..+.....+...    .+ .    .-+...+|+|++++.++....-..|+
T Consensus       183 la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----~~-~----~r~~~p~evA~~i~~ll~~~s~~TG~  253 (259)
T d1oaaa_         183 LAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL----KS-D----GALVDCGTSAQKLLGLLQKDTFQSGA  253 (259)
T ss_dssp             HHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH----HH-T----TCSBCHHHHHHHHHHHHHHCCSCTTE
T ss_pred             HHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhc----CC-C----CCCCCHHHHHHHHHHHhhhccCCCCC
Confidence                 388999999988754311000    000111111100    00 0    12467899999999988754333456


Q ss_pred             EEEe
Q 025270          146 IFNL  149 (255)
Q Consensus       146 ~~~i  149 (255)
                      .+++
T Consensus       254 ~idv  257 (259)
T d1oaaa_         254 HVDF  257 (259)
T ss_dssp             EEET
T ss_pred             eEEe
Confidence            6654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=94.29  E-value=0.0085  Score=44.92  Aligned_cols=132  Identities=11%  Similarity=0.115  Sum_probs=74.3

Q ss_pred             cCccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH-------
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS-------   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~-------   73 (255)
                      .+.+.|+.+++.|  +.+...+..++...  +-+.++.+||.+....+..        ..+..+|.+.+.+.+       
T Consensus        98 ~~~~~~~~~~~~n--~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~--------~~Y~~sK~al~~lt~~lA~el~  167 (241)
T d2a4ka1          98 LPLEAWEKVLRVN--LTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGL--------AHYAAGKLGVVGLARTLALELA  167 (241)
T ss_dssp             -CHHHHHHHHHHH--HHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHH--------HHHHHCSSHHHHHHHHHHHHHT
T ss_pred             hhccccccccccc--cccccccccccccccccccceeeccccccccccCc--------cccchhhHHHHHHHHHHHHHHh
Confidence            4455667777777  88888877776643  2234555555432211100        001123444333322       


Q ss_pred             hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           74 ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        74 e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      .+++.+..+.||.+=.+.... .............++         .-+...+|+|+++..++..... ..|+++.+.+|
T Consensus       168 ~~gIrvN~I~PG~v~T~~~~~-~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG  237 (241)
T d2a4ka1         168 RKGVRVNVLLPGLIQTPMTAG-LPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLLSEESAYITGQALYVDGG  237 (241)
T ss_dssp             TTTCEEEEEEECSBCCGGGTT-SCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhCCEEeeeccCcCCCHHHHh-hhHhHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCC
Confidence            237999999999884432211 223334444443221         1155789999999999975443 45789988887


Q ss_pred             Cc
Q 025270          153 RA  154 (255)
Q Consensus       153 ~~  154 (255)
                      ..
T Consensus       238 ~s  239 (241)
T d2a4ka1         238 RS  239 (241)
T ss_dssp             TT
T ss_pred             cc
Confidence            64

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.15  E-value=0.015  Score=44.32  Aligned_cols=130  Identities=8%  Similarity=0.005  Sum_probs=72.9

Q ss_pred             cccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh-------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e-------   74 (255)
                      +.|+.+++.|  +.++..+.+++.    +.+-.+++++||.+......            ....|+++|....       
T Consensus       108 e~~~~~~~vN--l~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~------------~~~~Y~asKaal~~ltk~lA  173 (274)
T d1xhla_         108 ELYQKTFKLN--FQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS------------GYPYYACAKAALDQYTRCTA  173 (274)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT------------TSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhc--ccccccccccccccccccccccccchhhhhccccCC------------CCceehhhhhHHHHHHHHHH
Confidence            4566777777  777666665554    44455788888755332211            1245776665422       


Q ss_pred             -----hCCceEEEecCcccCCCCCCC----cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC-C-cCC
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKD----CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP-E-AAS  143 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~-~-~~~  143 (255)
                           +|+.+..+.||.|--+.....    ....-.........-.++   ..  -+...+|+|+++..++..+ . -..
T Consensus       174 ~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iP---lg--R~g~pediA~~v~fL~S~d~s~~it  248 (274)
T d1xhla_         174 IDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP---VG--HCGKPEEIANIIVFLADRNLSSYII  248 (274)
T ss_dssp             HHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT---TS--SCBCHHHHHHHHHHHHCHHHHTTCC
T ss_pred             HHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCC---CC--CCcCHHHHHHHHHHHcCCccccCcc
Confidence                 389999999998854321100    011111111111110111   11  1567999999999998643 2 245


Q ss_pred             CCEEEecCCCc
Q 025270          144 SNIFNLVSDRA  154 (255)
Q Consensus       144 ~~~~~i~~~~~  154 (255)
                      |+++.+.+|..
T Consensus       249 G~~i~vDGG~~  259 (274)
T d1xhla_         249 GQSIVADGGST  259 (274)
T ss_dssp             SCEEEESTTGG
T ss_pred             CcEEEeCcCHH
Confidence            79999988853

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.99  E-value=0.092  Score=39.37  Aligned_cols=127  Identities=15%  Similarity=0.120  Sum_probs=72.0

Q ss_pred             CccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccc-cccCCCCCCCCCCCCCCCCCCChhHHHHHHHh------
Q 025270            4 NYAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSA-GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------   74 (255)
Q Consensus         4 ~~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~-~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e------   74 (255)
                      +.+.++.+++.|  +.+...+++++...  .-.+++.++|. +.....            +....|.++|...+      
T Consensus       104 ~~~~~~~~~~~n--~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~------------~~~~~Y~asK~al~~l~r~l  169 (259)
T d1ja9a_         104 TQELFDKVFNLN--TRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI------------PNHALYAGSKAAVEGFCRAF  169 (259)
T ss_dssp             CHHHHHHHHHHH--THHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC------------CSCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhhc--cceeeeehhhhhhhhhcCCcccccccccccccCC------------CCchhHHHHHHHHHHHHHHH
Confidence            445566677777  77777777766643  12345555553 333211            11245676664322      


Q ss_pred             ------hCCceEEEecCcccCCC-----------CCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHh
Q 025270           75 ------NFSNWASFRPQYMIGSG-----------NNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAV  136 (255)
Q Consensus        75 ------~~~~~~ilRp~~v~G~~-----------~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l  136 (255)
                            .++.+..+.||.+--+.           .... ....+...+....++         .-+...+|+|+++..++
T Consensus       170 A~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eVa~~v~fL~  240 (259)
T d1ja9a_         170 AVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL---------KRIGYPADIGRAVSALC  240 (259)
T ss_dssp             HHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHh
Confidence                  38999999999874220           0001 112222223332221         12568999999999999


Q ss_pred             cCCCc-CCCCEEEecCCC
Q 025270          137 ENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       137 ~~~~~-~~~~~~~i~~~~  153 (255)
                      ..... ..|+++.+-+|.
T Consensus       241 S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         241 QEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CchhcCCcCceEEeCCCC
Confidence            86554 357888888764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.94  E-value=0.046  Score=40.32  Aligned_cols=123  Identities=11%  Similarity=0.027  Sum_probs=71.0

Q ss_pred             cceEEecccCcccHHHHHHHHhh----------CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            8 FKALFRTNNNFRLQRPVADWAKS----------SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~----------~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      ++.+++.|  +.+...+...+..          .+-.++|++||...+....            ....|+++|...    
T Consensus        93 ~~~~~~~n--~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~lt  158 (241)
T d1uaya_          93 FRRVLEVN--LLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI------------GQAAYAASKGGVVALT  158 (241)
T ss_dssp             HHHHHHHH--THHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT------------TCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH--hhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC------------CchhhHHHHHHHHHHH
Confidence            34455555  5555555544432          2335799999976543211            125677777542    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASSN  145 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~  145 (255)
                              .+|+.+..+.||.|--+.... ........+....+  +.+      -+...+|+|.++..++.. .-..|+
T Consensus       159 ~~lA~ela~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~--~~~------R~g~pedvA~~v~fL~s~-~~iTG~  228 (241)
T d1uaya_         159 LPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVP--FPP------RLGRPEEYAALVLHILEN-PMLNGE  228 (241)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHHHTTCC--SSC------SCCCHHHHHHHHHHHHHC-TTCCSC
T ss_pred             HHHHHHHhhcCCceeeecCCcccccccch-hhhhHHHHHHhcCC--CCC------CCcCHHHHHHHHHHHHhC-CCCCCC
Confidence                    238999999999885432111 11222223333222  111      145789999999999874 334579


Q ss_pred             EEEecCCCc
Q 025270          146 IFNLVSDRA  154 (255)
Q Consensus       146 ~~~i~~~~~  154 (255)
                      ++.+.+|..
T Consensus       229 ~i~VDGG~~  237 (241)
T d1uaya_         229 VVRLDGALR  237 (241)
T ss_dssp             EEEESTTCC
T ss_pred             EEEECCccc
Confidence            999887753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=93.65  E-value=0.07  Score=39.98  Aligned_cols=124  Identities=10%  Similarity=-0.056  Sum_probs=71.8

Q ss_pred             ccccceEEecccCcccHHHHHHHHhh----C---CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKS----S---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~----~---~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      .+.++.++++|  +.++.++..++..    .   ...++|++||...+....            ....|+++|...    
T Consensus        97 ~~~~~~~~~vN--l~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~------------~~~~Y~asKaal~~~t  162 (254)
T d1sbya1          97 DHQIERTIAIN--FTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH------------QVPVYSASKAAVVSFT  162 (254)
T ss_dssp             TTCHHHHHHHH--THHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------------TSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--hHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC------------CCHHHHHHHHHHHHHH
Confidence            45566677777  7776666665543    2   235799999976543211            124677777542    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCe-eccCCCCcceeeeeHHHHHHHHHHHhcCCCcCCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPV-PIPGSGMQFTNIAHVRDLSSMLTLAVENPEAASS  144 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~  144 (255)
                              ..++.+..+.||.|..+.         .+.+...... .........+.....+++|++++.+++....  |
T Consensus       163 ~~la~el~~~gIrVn~I~PG~v~T~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~~~t--G  231 (254)
T d1sbya1         163 NSLAKLAPITGVTAYSINPGITRTPL---------VHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKN--G  231 (254)
T ss_dssp             HHHHHHHHHHSEEEEEEEECSEESHH---------HHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHHCCT--T
T ss_pred             HHHHhhccccCeEEEEEEeCCCcCcc---------ccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhCCCC--C
Confidence                    238999999999886531         1110000000 0000000112345789999999998876643  7


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       232 ~vi~vdgG~  240 (254)
T d1sbya1         232 AIWKLDLGT  240 (254)
T ss_dssp             CEEEEETTE
T ss_pred             CEEEECCCE
Confidence            888888774

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=93.53  E-value=0.02  Score=43.71  Aligned_cols=123  Identities=12%  Similarity=0.094  Sum_probs=68.9

Q ss_pred             ccceEEecccCcccHHHHHHHHh----hCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~----~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      .|+.++++|  +.++..+.+++.    +.+ .++|++||...+-..            +....|.++|...         
T Consensus       107 ~~~~~~~vN--l~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~------------~~~~~Y~asKaal~~ltr~lA~  171 (276)
T d1bdba_         107 AFDEVFHIN--VKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN------------GGGPLYTAAKHAIVGLVRELAF  171 (276)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT------------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHh--hHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC------------CCCchHHHHHHHHHHHHHHHHH
Confidence            366677777  777666655553    334 468888876533211            1124677777542         


Q ss_pred             hh--CCceEEEecCcccCCCCCCCc---------HHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCC--C
Q 025270           74 EN--FSNWASFRPQYMIGSGNNKDC---------EEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENP--E  140 (255)
Q Consensus        74 e~--~~~~~ilRp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~--~  140 (255)
                      |.  ++.+..+.||.|--+......         ...+...+....  ++       .-+...+|+|.+++.++..+  .
T Consensus       172 ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Pl-------gR~g~peeva~~v~fL~S~~~a~  242 (276)
T d1bdba_         172 ELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVL--PI-------GRMPEVEEYTGAYVFFATRGDAA  242 (276)
T ss_dssp             HHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTC--TT-------SSCCCGGGGSHHHHHHHCHHHHT
T ss_pred             HhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHcCCcccC
Confidence            22  588999999988544221110         001111221111  11       11456899999998887532  2


Q ss_pred             cCCCCEEEecCCC
Q 025270          141 AASSNIFNLVSDR  153 (255)
Q Consensus       141 ~~~~~~~~i~~~~  153 (255)
                      -..|+++++.+|-
T Consensus       243 ~itG~~i~VDGG~  255 (276)
T d1bdba_         243 PATGALLNYDGGL  255 (276)
T ss_dssp             TCSSCEEEESSSG
T ss_pred             CeeCcEEEECcCh
Confidence            2457999988774

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.22  E-value=0.0065  Score=45.96  Aligned_cols=129  Identities=9%  Similarity=0.031  Sum_probs=69.8

Q ss_pred             cccceEEecccCcccHHHHHHHH----hhCC---cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWA----KSSG---VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------   72 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa----~~~~---v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~------   72 (255)
                      ..++..++.|  +.++.++..++    ++.+   -.++|++||...+-...            ....|.++|..      
T Consensus        96 ~~~~~~~~~n--~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          96 KNWEKTLQIN--LVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------------QQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             SSHHHHHHHH--THHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------------TCHHHHHHHHHHHHHHH
T ss_pred             ccchheeeee--hhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC------------CccchHHHHHHHHHHHH
Confidence            3455566666  65554444444    3322   24699999976542211            12446655531      


Q ss_pred             -----Hh---hCCceEEEecCcccCCCCCCC-------cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhc
Q 025270           73 -----SE---NFSNWASFRPQYMIGSGNNKD-------CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVE  137 (255)
Q Consensus        73 -----~e---~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~  137 (255)
                           .|   .++.+..+.||.|--+.....       ....+...+...  +++       .-+...+|+|++++.++.
T Consensus       162 s~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedvA~~v~fL~s  232 (254)
T d2gdza1         162 SAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM--IKY-------YGILDPPLIANGLITLIE  232 (254)
T ss_dssp             HHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH--HHH-------HCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHHc
Confidence                 12   378999999997733210000       000000111100  011       124578999999999998


Q ss_pred             CCCcCCCCEEEecCCCccCHH
Q 025270          138 NPEAASSNIFNLVSDRAVTLD  158 (255)
Q Consensus       138 ~~~~~~~~~~~i~~~~~~s~~  158 (255)
                      .+. ..|+++.+.+|..+.++
T Consensus       233 ~~~-itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         233 DDA-LNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             CTT-CSSCEEEEETTTEEEEC
T ss_pred             CCC-CCCCEEEECCCCeeecc
Confidence            654 55799999888765443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=93.10  E-value=0.015  Score=43.94  Aligned_cols=134  Identities=8%  Similarity=0.033  Sum_probs=76.2

Q ss_pred             cCccccceEEecccCcccHHHHHHHHhh-----CCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH----
Q 025270            3 FNYAKFKALFRTNNNFRLQRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS----   73 (255)
Q Consensus         3 ~~~~~~d~~~~~~~n~~~~~~ll~aa~~-----~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~----   73 (255)
                      .+.+.++.+++.|  +.++..+.+++..     .+-.+++..||...........     ...+....|.++|...    
T Consensus       106 ~~~~~~~~~~~~N--~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~-----~~~~~~~~Y~asKaal~~lt  178 (260)
T d1h5qa_         106 LTHEDFAFVYDVN--VFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL-----NGSLTQVFYNSSKAACSNLV  178 (260)
T ss_dssp             CCHHHHHHHHHHH--THHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-----TEECSCHHHHHHHHHHHHHH
T ss_pred             hcccccccccccc--ccchhhhhhhhcccccccccceEEEEeecccccccccccc-----ccCccccchhhhhhhHHHHH
Confidence            4455677777777  7776666555432     2344566666655442211100     0011224577766543    


Q ss_pred             --------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCC
Q 025270           74 --------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASS  144 (255)
Q Consensus        74 --------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~  144 (255)
                              .+|+.+..+.||.|--+.... ....+...+....++       .  -+...+|+|.++..++..... ..|
T Consensus       179 ~~lA~el~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~pl-------~--R~g~pedvA~~v~fL~S~~s~~itG  248 (260)
T d1h5qa_         179 KGLAAEWASAGIRVNALSPGYVNTDQTAH-MDKKIRDHQASNIPL-------N--RFAQPEEMTGQAILLLSDHATYMTG  248 (260)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHHHHTCTT-------S--SCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHhchhCeEEeecCCCcccCcchhc-cCHHHHHHHHhcCCC-------C--CCcCHHHHHHHHHHHhcchhCCCcC
Confidence                    238999999999885432211 222333333333221       1  146789999999998875443 357


Q ss_pred             CEEEecCCC
Q 025270          145 NIFNLVSDR  153 (255)
Q Consensus       145 ~~~~i~~~~  153 (255)
                      +++.+.+|.
T Consensus       249 ~~i~VDGG~  257 (260)
T d1h5qa_         249 GEYFIDGGQ  257 (260)
T ss_dssp             CEEEECTTG
T ss_pred             ceEEECCCe
Confidence            899888875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=93.08  E-value=0.15  Score=38.33  Aligned_cols=127  Identities=13%  Similarity=0.065  Sum_probs=70.7

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH---------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS---------   73 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~---------   73 (255)
                      ...++..++.|  +.++..+.+++...  .-.++++++|........           +....|.+.|...         
T Consensus       117 ~~~~~~~~~~n--l~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~-----------~~~~~Y~asKaal~~ltk~lA~  183 (272)
T d1g0oa_         117 PEEFDRVFTIN--TRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-----------PKHAVYSGSKGAIETFARCMAI  183 (272)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-----------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHhhhc--cceeeeeccccccccccccccccccccccccccc-----------cchhhHHHHHHHHHHHHHHHHH
Confidence            34455556666  88888888777753  124677777644221111           1124566666432         


Q ss_pred             ---hhCCceEEEecCcccCCC--------C--CCCcHH-HHHHH-HHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcC
Q 025270           74 ---ENFSNWASFRPQYMIGSG--------N--NKDCEE-WFFDR-IVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVEN  138 (255)
Q Consensus        74 ---e~~~~~~ilRp~~v~G~~--------~--~~~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~  138 (255)
                         ..|+.+..+.||.+-.+.        .  ...... ..... .....  ++     .  -+...+|+|.++..++..
T Consensus       184 e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Pl-----g--R~~~peevA~~v~fL~s~  254 (272)
T d1g0oa_         184 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS--PL-----R--RVGLPIDIARVVCFLASN  254 (272)
T ss_dssp             HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC--TT-----C--SCBCHHHHHHHHHHHHSG
T ss_pred             HhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC--CC-----C--CCcCHHHHHHHHHHHhCc
Confidence               238999999999884321        0  000001 11111 11111  11     1  267889999999999975


Q ss_pred             CCc-CCCCEEEecCCC
Q 025270          139 PEA-ASSNIFNLVSDR  153 (255)
Q Consensus       139 ~~~-~~~~~~~i~~~~  153 (255)
                      ... .+|+++.+.+|.
T Consensus       255 ~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         255 DGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCccCceEeECCCC
Confidence            443 357888888875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=93.03  E-value=0.21  Score=37.86  Aligned_cols=127  Identities=6%  Similarity=-0.054  Sum_probs=74.3

Q ss_pred             ccccceEEecccCcccHHHHHHHHhhCCc--ceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHH----------
Q 025270            5 YAKFKALFRTNNNFRLQRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI----------   72 (255)
Q Consensus         5 ~~~~d~~~~~~~n~~~~~~ll~aa~~~~v--~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~----------   72 (255)
                      .+.++..+++|  +.+...+..++.....  .+.+.+++.+.......           ....|...|..          
T Consensus       142 ~~~~~~~~~vn--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~y~~aKaa~~~l~~~~a~  208 (297)
T d1d7oa_         142 RKGYLAAISAS--SYSFVSLLSHFLPIMNPGGASISLTYIASERIIPG-----------YGGGMSSAKAALESDTRVLAF  208 (297)
T ss_dssp             HHHHHHHHHHH--THHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT-----------CTTTHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccch--hhhhhhhhhHHHHHhhcCCcceeeeehhhcccccc-----------cccceecccccccccccccch
Confidence            34455566666  8888888887775422  23555555443221111           11345544421          


Q ss_pred             ---HhhCCceEEEecCcccCCCCCCC-cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEE
Q 025270           73 ---SENFSNWASFRPQYMIGSGNNKD-CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIF  147 (255)
Q Consensus        73 ---~e~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~  147 (255)
                         ..+++.+..+.||.+-.+..... ....+........+  +     .  -+...+|+|.+++.++..... ..|+++
T Consensus       209 e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~P--l-----g--R~~~peevA~~v~fL~S~~a~~itGq~i  279 (297)
T d1d7oa_         209 EAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAP--I-----Q--KTLTADEVGNAAAFLVSPLASAITGATI  279 (297)
T ss_dssp             HHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSS--S-----C--CCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             hccccceEEecccccccccchhhhhccCCHHHHHHHHhCCC--C-----C--CCCCHHHHHHHHHHHhCchhcCCcCceE
Confidence               23489999999999977654432 22333444433322  1     1  146799999999999975443 457889


Q ss_pred             EecCCC
Q 025270          148 NLVSDR  153 (255)
Q Consensus       148 ~i~~~~  153 (255)
                      .+.+|.
T Consensus       280 ~vDGG~  285 (297)
T d1d7oa_         280 YVDNGL  285 (297)
T ss_dssp             EESTTG
T ss_pred             EECcCH
Confidence            888774

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.45  E-value=0.11  Score=38.35  Aligned_cols=112  Identities=5%  Similarity=0.006  Sum_probs=68.3

Q ss_pred             cccceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------
Q 025270            6 AKFKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------   74 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------   74 (255)
                      +.++.+++.|  +.++.++..++...  +-.++|++||.+......            ....|+++|....         
T Consensus        94 ~~~~~~~~~n--~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~lt~~la~E  159 (236)
T d1dhra_          94 KNCDLMWKQS--IWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------------GMIGYGMAKGAVHQLCQSLAGK  159 (236)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------TBHHHHHHHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHc--chHHHHHHHHHHHhcccccceeEEccHHHcCCcc------------CCcccHHHHHHHHHHHHHHHHH
Confidence            3455666666  77777776666542  225799999976543211            1256887775432         


Q ss_pred             -----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEE
Q 025270           75 -----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFN  148 (255)
Q Consensus        75 -----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~  148 (255)
                           .++.+..+.||.+.-+         +.+.....         ...-.++..+++|+.+..++..... .+|+.+.
T Consensus       160 l~~~~~gI~vn~v~PG~v~T~---------~~~~~~~~---------~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~  221 (236)
T d1dhra_         160 NSGMPSGAAAIAVLPVTLDTP---------MNRKSMPE---------ADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQ  221 (236)
T ss_dssp             TSSCCTTCEEEEEEESCEECH---------HHHHHSTT---------SCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred             hccCCCcEEEEEEEeccCcCC---------cchhhCcc---------chhhcCCCHHHHHHHHHHHhCCCccCCCCCeEE
Confidence                 2588899999887542         11221111         1122367889999999999876543 4466555


Q ss_pred             e
Q 025270          149 L  149 (255)
Q Consensus       149 i  149 (255)
                      +
T Consensus       222 v  222 (236)
T d1dhra_         222 V  222 (236)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.06  E-value=0.034  Score=42.26  Aligned_cols=127  Identities=12%  Similarity=0.100  Sum_probs=68.7

Q ss_pred             ccceEEecccCcccHHHHHHHHhh----CCcceEEEecc-ccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            7 KFKALFRTNNNFRLQRPVADWAKS----SGVKQFLFISS-AGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         7 ~~d~~~~~~~n~~~~~~ll~aa~~----~~v~r~i~~Ss-~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      .|+.+++.|  +.++..+.+++..    .+- ++|.++| .+.....            +....|+++|...        
T Consensus       112 ~~~~~~~vN--l~~~~~~~~~~~p~m~~~~g-~iI~~~Ss~a~~~~~------------~~~~~Y~asKaal~~ltk~lA  176 (272)
T d1xkqa_         112 IYHKTLKLN--LQAVIEMTKKVKPHLVASKG-EIVNVSSIVAGPQAQ------------PDFLYYAIAKAALDQYTRSTA  176 (272)
T ss_dssp             HHHHHHHHH--THHHHHHHHHHHHHHHHHTC-EEEEECCGGGSSSCC------------CSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhh--hhHHHHHHHhhcccccccCC-ccccccchhccccCC------------CCcchhhhHHHHHHHHHHHHH
Confidence            355666677  7777777666543    232 4555544 3322111            1125677777532        


Q ss_pred             ----hhCCceEEEecCcccCCCCCC----C-cHHHHHHHHHcC-CCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC--c
Q 025270           74 ----ENFSNWASFRPQYMIGSGNNK----D-CEEWFFDRIVRK-RPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE--A  141 (255)
Q Consensus        74 ----e~~~~~~ilRp~~v~G~~~~~----~-~~~~~~~~~~~~-~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~  141 (255)
                          .+++.+..+.||.|--+....    . ....+...+... ..+++     .  -+...+|+|+++..++..+.  -
T Consensus       177 ~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-----g--R~g~pediA~~v~fL~S~~as~~  249 (272)
T d1xkqa_         177 IDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-----G--AAGKPEHIANIILFLADRNLSFY  249 (272)
T ss_dssp             HHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-----S--SCBCHHHHHHHHHHHHCHHHHTT
T ss_pred             HHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-----C--CCcCHHHHHHHHHHHhCcchhCC
Confidence                238999999999885432110    0 001111111111 11111     1  15678999999999986432  2


Q ss_pred             CCCCEEEecCCCcc
Q 025270          142 ASSNIFNLVSDRAV  155 (255)
Q Consensus       142 ~~~~~~~i~~~~~~  155 (255)
                      ..|+++.+.+|..+
T Consensus       250 iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         250 ILGQSIVADGGTSL  263 (272)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCeEEEeCcCHHH
Confidence            45799999888644

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.66  E-value=0.35  Score=37.43  Aligned_cols=32  Identities=6%  Similarity=0.068  Sum_probs=24.7

Q ss_pred             eeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCC
Q 025270          122 IAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDR  153 (255)
Q Consensus       122 ~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~  153 (255)
                      +...+|+|.+++.++..... ..|+++.+-+|.
T Consensus       290 ~~~pedvA~~v~fLaSd~s~~iTGq~i~VDGG~  322 (329)
T d1uh5a_         290 KLLSTDIGSVASFLLSRESRAITGQTIYVDNGL  322 (329)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCCeEEECCCc
Confidence            56789999999999875433 457899888775

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=88.50  E-value=1.1  Score=33.25  Aligned_cols=82  Identities=9%  Similarity=0.024  Sum_probs=50.0

Q ss_pred             ChhHHHHHHH------------hhCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHH
Q 025270           64 GHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSM  131 (255)
Q Consensus        64 ~~y~~ek~~~------------e~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~  131 (255)
                      ..|..+|...            .+|+.+-.+.||.+--..   ..............+  +.+      -+...+|+|.+
T Consensus       188 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~---~~~~~~~~~~~~~~p--l~~------R~~~peeiA~~  256 (284)
T d1e7wa_         188 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD---DMPPAVWEGHRSKVP--LYQ------RDSSAAEVSDV  256 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG---GSCHHHHHHHHTTCT--TTT------SCBCHHHHHHH
T ss_pred             eeeccccccchhhhHHHHHHhCCccccccccccccccccc---cCCHHHHHHHHhcCC--CCC------CCCCHHHHHHH
Confidence            4577666432            238899999998532111   122334444443322  111      14578999999


Q ss_pred             HHHHhcCCCc-CCCCEEEecCCCccC
Q 025270          132 LTLAVENPEA-ASSNIFNLVSDRAVT  156 (255)
Q Consensus       132 ~~~~l~~~~~-~~~~~~~i~~~~~~s  156 (255)
                      +..++..... ..|+++.+-+|..++
T Consensus       257 v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         257 VIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHhCchhcCccCCeEEECcChhcc
Confidence            9999875443 457899998886543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.71  E-value=0.24  Score=36.96  Aligned_cols=118  Identities=12%  Similarity=0.041  Sum_probs=62.8

Q ss_pred             ccCccccceEEecccCcccHHHHHHHH----hhCC--cceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--
Q 025270            2 EFNYAKFKALFRTNNNFRLQRPVADWA----KSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--   73 (255)
Q Consensus         2 ~~~~~~~d~~~~~~~n~~~~~~ll~aa----~~~~--v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--   73 (255)
                      +++.+.++..++.|  +.+...+..++    ++.+  -.++|++||.+.+.....          +....|...|...  
T Consensus       107 ~~~~~~~~~~~~~n--l~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~----------~~~~~Y~~sKaal~~  174 (257)
T d1xg5a_         107 SGSTSGWKDMFNVN--VLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL----------SVTHFYSATKYAVTA  174 (257)
T ss_dssp             TCCHHHHHHHHHHH--THHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC----------GGGHHHHHHHHHHHH
T ss_pred             cccHHHHHhhhhhh--hhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC----------cccHHHHHHHHHHHh
Confidence            34556677777777  77766655554    3333  358999999765422110          0113466555321  


Q ss_pred             -------h-----hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc
Q 025270           74 -------E-----NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA  141 (255)
Q Consensus        74 -------e-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~  141 (255)
                             |     .++.+..+.||.+=.+.... ............    .     ....++..+|+|+++..++..+..
T Consensus       175 ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~-~~~~~~~~~~~~----~-----~~~r~~~pedvA~~v~fL~s~~a~  244 (257)
T d1xg5a_         175 LTEGLRQELREAQTHIRATCISPGVVETQFAFK-LHDKDPEKAAAT----Y-----EQMKCLKPEDVAEAVIYVLSTPAH  244 (257)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH-HTTTCHHHHHHH----H-----C---CBCHHHHHHHHHHHHHSCTT
T ss_pred             CHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhh-cChhhHHHHHhc----C-----CCCCCcCHHHHHHHHHHHhCChhc
Confidence                   1     36888899998663221000 000001111110    1     112357899999999999987654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=84.98  E-value=0.64  Score=33.83  Aligned_cols=110  Identities=9%  Similarity=0.029  Sum_probs=63.5

Q ss_pred             cceEEecccCcccHHHHHHHHhhC--CcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHHh---------h-
Q 025270            8 FKALFRTNNNFRLQRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE---------N-   75 (255)
Q Consensus         8 ~d~~~~~~~n~~~~~~ll~aa~~~--~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~e---------~-   75 (255)
                      ++..++.|  +.++..+..++...  +-.++|++||........            ....|+++|...+         . 
T Consensus        96 ~~~~~~~n--~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaal~~l~~~la~e~~  161 (235)
T d1ooea_          96 ADLMIKQS--VWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP------------SMIGYGMAKAAVHHLTSSLAAKDS  161 (235)
T ss_dssp             HHHHHHHH--HHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------TBHHHHHHHHHHHHHHHHHHSTTS
T ss_pred             HhhHhhhH--HHHHHHHhhhcccccccceEEEEeccHHhcCCcc------------cccchHHHHHHHHHHHHHHHHHhc
Confidence            44555556  77777777666643  125799999976543211            1256777775432         1 


Q ss_pred             ----CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc--CCCCEEEe
Q 025270           76 ----FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA--ASSNIFNL  149 (255)
Q Consensus        76 ----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~i  149 (255)
                          ++.+..+.||.+--         .+.+.....         .....++..+|+++.++..+..+..  ..|..+.+
T Consensus       162 ~~~~~i~v~~i~Pg~~~T---------~~~~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         162 GLPDNSAVLTIMPVTLDT---------PMNRKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             SCCTTCEEEEEEESCBCC---------HHHHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             cCCCceEEEEEecCcCcC---------cchhhhCcC---------CccccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence                45677788887632         122332221         1223467899999998866654432  34566665

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.46  E-value=0.054  Score=40.40  Aligned_cols=101  Identities=9%  Similarity=0.026  Sum_probs=59.7

Q ss_pred             cccceEEecccCcccHHHHHHH----HhhCCcceEEEeccccccCCCCCCCCCCCCCCCCCCChhHHHHHHH--------
Q 025270            6 AKFKALFRTNNNFRLQRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS--------   73 (255)
Q Consensus         6 ~~~d~~~~~~~n~~~~~~ll~a----a~~~~v~r~i~~Ss~~vy~~~~~~~~~E~~~~~~~~~~y~~ek~~~--------   73 (255)
                      +.++.++++|  +.++.++..+    +++.+-.++|++||...+...            |....|+++|...        
T Consensus       106 ~~~~~~~~vN--~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~------------~~~~~Y~asKaal~~~~~~La  171 (244)
T d1yb1a_         106 PQIEKTFEVN--VLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV------------PFLLAYCSSKFAAVGFHKTLT  171 (244)
T ss_dssp             HHHHHHHHHH--THHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhhccee--eeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC------------CCcHHHHHHHHHHHHHHHHHH
Confidence            3455666677  6665555554    445566789999997644211            1125577777542        


Q ss_pred             -h------hCCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCC
Q 025270           74 -E------NFSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPE  140 (255)
Q Consensus        74 -e------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~  140 (255)
                       |      .|+.+..+.||.|--+....             ...       .....+..+|+|+.+...+....
T Consensus       172 ~El~~~~~~gI~V~~i~PG~v~T~~~~~-------------~~~-------~~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         172 DELAALQITGVKTTCLCPNFVNTGFIKN-------------PST-------SLGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HHHHHTTCTTEEEEEEEETHHHHCSTTC-------------THH-------HHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHhhcCCCEEEEEEEcCCCCChhhhC-------------cCc-------cccCCCCHHHHHHHHHHHHhcCC
Confidence             1      26889999998773332111             100       11123467899999998887654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.76  E-value=5.5  Score=28.82  Aligned_cols=69  Identities=10%  Similarity=0.129  Sum_probs=44.2

Q ss_pred             CCceEEEecCcccCCCCCCCcHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCCCc
Q 025270           76 FSNWASFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSDRA  154 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~~~  154 (255)
                      |+.+..+.||.+.-+....   ......+....+  + +     +-+...+|+|.++..++..... .+|+++.+-+|..
T Consensus       194 gIrVN~I~PG~i~t~~~~~---~~~~~~~~~~~p--l-~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         194 HIRVNAVAPGLSLLPPAMP---QETQEEYRRKVP--L-G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             TEEEEEEEESSBSCCSSSC---HHHHHHHHTTCT--T-T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CcEEEEeccCcEeccccCC---HHHHHHHHhcCC--C-C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence            8999999999886543222   223333333221  1 1     1135789999999999986543 3578999888754


Q ss_pred             c
Q 025270          155 V  155 (255)
Q Consensus       155 ~  155 (255)
                      +
T Consensus       263 l  263 (266)
T d1mxha_         263 L  263 (266)
T ss_dssp             G
T ss_pred             h
Confidence            3

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=82.60  E-value=3.3  Score=30.83  Aligned_cols=70  Identities=9%  Similarity=0.176  Sum_probs=42.5

Q ss_pred             CCceEEEecCcccCCCCCCC--cHHHHHHHHHcCCCeeccCCCCcceeeeeHHHHHHHHHHHhcCCCc-CCCCEEEecCC
Q 025270           76 FSNWASFRPQYMIGSGNNKD--CEEWFFDRIVRKRPVPIPGSGMQFTNIAHVRDLSSMLTLAVENPEA-ASSNIFNLVSD  152 (255)
Q Consensus        76 ~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~i~~~  152 (255)
                      |+.+-.+.||.|-.+.....  .............++         .-+...+|+|+++..++..... ..|+++.+.+|
T Consensus       198 gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         198 GMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEELANLAAFLCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             TEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC---------CCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            89999999999865432211  111233333332221         1145789999999999975443 45789999888


Q ss_pred             Cc
Q 025270          153 RA  154 (255)
Q Consensus       153 ~~  154 (255)
                      ..
T Consensus       269 ~~  270 (294)
T d1w6ua_         269 EE  270 (294)
T ss_dssp             HH
T ss_pred             hh
Confidence            53