Citrus Sinensis ID: 025283

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAVRSRSKI
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccHHHHcccHHHHHHccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEccccccEEEEccccHHHHHHHcccccHHHHHHHHHHcccHHHHHccccccHHHHHHcccccccccccccccccccEEEcccEEccccccccccccHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MLIYISNVQLLAITIIIFGVWmsthhdncrrsltlpvlglGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITnngsghsvaglrykeyqLKDYSSWFLnhlnnpenWKRLKSCLvksedcnnlSKKYKTLKQfksakltpieagccrppfecgypvvnasyydlsfhptssnkdcklyknsravkcyncdsckaGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCArrnavrsrski
Flexible Loop (DISEMBL)
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCArrnavrsrski
Low Complexity Region (SEG)
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVlglgalifiisiigflgalKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAVRSRSKI
Disordered region (IsUnstruct)
*LIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARR*********
Disordered Region (DISOPRED)
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCA****V******
Disordered Region (DISEMBL)
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARR*********
Disordered Region (DISPRO)
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNA*******
Transmembrane Helix (TMHMM)
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLIYISNVQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAVRSRSKI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
F4I214	284	Tetraspanin-10 OS=Arabido	no	no	0.882	0.792	0.782	1e-103
Q8S8Q6	273	Tetraspanin-8 OS=Arabidop	no	no	0.964	0.901	0.393	8e-51
Q9M0B7	272	Tetraspanin-9 OS=Arabidop	no	no	0.956	0.897	0.379	9e-48
Q9M1E7	285	Tetraspanin-3 OS=Arabidop	no	no	0.945	0.845	0.344	9e-47
Q9SUD4	263	Tetraspanin-7 OS=Arabidop	no	no	0.949	0.920	0.364	5e-45
Q9LPR6	271	Tetraspanin-11 OS=Arabido	no	no	0.956	0.900	0.329	8e-42
Q9ZUN5	270	Tetraspanin-2 OS=Arabidop	no	no	0.925	0.874	0.386	4e-39
Q9FIQ5	269	Protein TORNADO 2 OS=Arab	no	no	0.933	0.884	0.370	7e-37
Q9LSS4	327	Tetraspanin-4 OS=Arabidop	no	no	0.945	0.737	0.352	1e-36
Q9C7C1	282	Tetraspanin-6 OS=Arabidop	no	no	0.890	0.804	0.330	2e-36

>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1

 Score =  375 bits (963), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/225 (78%), Positives = 194/225 (86%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           LLA+ +IIFGVWMSTH+D CRRSLT PV+ LG  IF+ISIIGFLGA K +  LLWIYL +
Sbjct: 19  LLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYLAV 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           L +VL+AILVFTVLAFI+TNNGSGH+  GLRYKEY+L DYSSWFL  LNN  NW RLKSC
Sbjct: 79  LLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLKSC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSE C  LSKKYKT+KQ KSA+LTPIEAGCCRPP ECGYP VNASYYDLSFH  SSNK
Sbjct: 139 LVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVNASYYDLSFHSISSNK 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVL 234
           DCKLYKN R +KCYNCDSCKAGVAQYMK EWR+VAIFN++LFVVL
Sbjct: 199 DCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVL 243

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1

 Score =  200 bits (509), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 153/249 (61%), Gaps = 3/249 (1%)

Query: 8   VQLLAITIIIFGVWMSTHHD-NCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIY 66
           V LL+I I+  G+W+S      C R L  PV+ LG  + +++I G +G+    T LLW+Y
Sbjct: 16  VFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGSCCRVTWLLWVY 75

Query: 67  LIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRL 126
           L ++ L+++ +   TV AF++TN G+G ++ G  YKEY+L DYS+W    + N +NW ++
Sbjct: 76  LFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKI 135

Query: 127 KSCLVKSEDCNNLSKKYKT--LKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHP 184
           +SCLV+S+ C+ L  K+    +  F    LT +++GCC+P  ECG+  VN + +  +   
Sbjct: 136 RSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPTTWTKNTTG 195

Query: 185 TSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCA 244
           T +N DC+ + N++   C++C SCKAG+   +K  W+ VAI N++  V L IVY VGCCA
Sbjct: 196 THTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCA 255

Query: 245 RRNAVRSRS 253
            RN  R  S
Sbjct: 256 FRNNKRDDS 264

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1

 Score =  190 bits (482), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 94/248 (37%), Positives = 147/248 (59%), Gaps = 4/248 (1%)

Query: 8   VQLLAITIIIFGVWMSTHHD-NCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIY 66
           V LL++ I+  G+W+S      C R L  P++ LG  + II+I G +G+    T LLW Y
Sbjct: 16  VFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGSCCRVTWLLWSY 75

Query: 67  LIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRL 126
           L ++  +++ +L FT+ AF++T+ GSG ++ G  YKEY+L+ YS W    +NN ++W  +
Sbjct: 76  LFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQRRVNNAKHWNSI 135

Query: 127 KSCLVKSEDCNNLS--KKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHP 184
           +SCL +S+ C NL       T+  F    LT  E+GCC+P  +C +  + ++ ++ +   
Sbjct: 136 RSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFTYITSTTWNKT-SG 194

Query: 185 TSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCA 244
           T  N DC+L+ N +   CYNC +CKAG    +K  W+ VAI N+I  V+L +VY +GCCA
Sbjct: 195 THKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLVLLVVVYAMGCCA 254

Query: 245 RRNAVRSR 252
            RN    R
Sbjct: 255 FRNNKEDR 262

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1

 Score =  187 bits (474), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 148/247 (59%), Gaps = 6/247 (2%)

Query: 10  LLAITIIIFGVWMSTHHD--NCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYL 67
           LL+I I+  G+W+S+  +  +C R L  P++ +G  I ++S+ GF GA   N  L+W+YL
Sbjct: 17  LLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGACYRNKFLMWLYL 76

Query: 68  IMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLK 127
           +++ L++ A++ F + A+ +T+ GSG +V    Y +Y L+DYS W  + +++   W ++ 
Sbjct: 77  VVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWLKDRVSDDSYWGKIS 136

Query: 128 SCLVKSEDCNNLSKKY----KTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFH 183
           SCL  S  C  + + +    +T   F   +L+P+E+GCC+PP +CG+  VN + +D    
Sbjct: 137 SCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGG 196

Query: 184 PTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCC 243
               N+DC ++ N +++ CY C SCKAGV   +K  WR V++ N+++ ++L I Y +   
Sbjct: 197 MIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYA 256

Query: 244 ARRNAVR 250
           A RN  R
Sbjct: 257 AYRNVKR 263

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1

 Score =  181 bits (459), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 147/247 (59%), Gaps = 5/247 (2%)

Query: 10  LLAITIIIFGVWMSTHH-DNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLI 68
           LL+I I+  G+W+  +    C R L  P++ LG  +  +SI G +GA    + LLW+YL 
Sbjct: 18  LLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGACCRVSCLLWLYLF 77

Query: 69  MLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKS 128
            + L+++    FT+ AF +TN G+G  ++   YKEY + DYS+W    +NN +NW+R++S
Sbjct: 78  AMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQKRVNNAKNWERIRS 137

Query: 129 CLVKSEDCNNLSKKYKTL--KQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTS 186
           CL+ S+ C+    +Y ++  + F  + L  +++GCC+P  +C +  VN + +  +  P  
Sbjct: 138 CLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYVNPTTWTKTPGPY- 196

Query: 187 SNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARR 246
            N+DC ++ N     CY+C++CKAG+   +K  W+ VA  N++  + L IVY VGCCA R
Sbjct: 197 KNEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVGCCAFR 256

Query: 247 NAVRSRS 253
           N  R RS
Sbjct: 257 NN-RKRS 262

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1

 Score =  170 bits (431), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 150/252 (59%), Gaps = 8/252 (3%)

Query: 8   VQLLAITIIIFGVWMSTHHD--NCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWI 65
           V L+  + I + ++M  H    +C  ++ +P+L  G ++F++S++G +G+     + +  
Sbjct: 16  VMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVIGSCFKENLAMVS 75

Query: 66  YLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKR 125
           YLI+L   +VA+++F++  F +TN G+G  V+G  YKEY+  D+S+W LN     + W  
Sbjct: 76  YLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW-LNGFVGGKRWVG 134

Query: 126 LKSCLVKSEDCNNLS--KKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYY---DL 180
           ++SCL ++  C++LS  +  +    F    L+PI++GCC+PP +C +   NA+++     
Sbjct: 135 IRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSK 194

Query: 181 SFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFV 240
           +    + N DC  + N +   C+NC++CKAGV   ++ +WR + +FN+ L ++L  VY  
Sbjct: 195 NETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVFNICLLILLITVYSC 254

Query: 241 GCCARRNAVRSR 252
           GCCARRN   +R
Sbjct: 255 GCCARRNNRTAR 266

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1

 Score =  161 bits (408), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/243 (38%), Positives = 149/243 (61%), Gaps = 7/243 (2%)

Query: 10  LLAITIIIFGVWMSTHHDN-CRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLI 68
           L +I I   G+W+++  DN C   L  PV+ LG LI ++S  GF+GA K    LL +YL 
Sbjct: 17  LCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIGAYKYKETLLAVYLC 76

Query: 69  MLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKS 128
            + +++  +LV  + AF++T     + V G  YKEY+L+ +S+W   ++ + +NW RL++
Sbjct: 77  CMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLKENVVDSKNWGRLRA 136

Query: 129 CLVKSEDCNNLSKKYKTLKQ-FKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPT-- 185
           CL  +  C  L++++ T  Q F S+K+TP+++GCC+PP  CGY  VN +   L  +PT  
Sbjct: 137 CLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFVNPT---LWLNPTNM 193

Query: 186 SSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCAR 245
           +++ DC L+ N ++  CYNC+SCKAG+   ++ EWR   +  +I  VVL  VY + C A 
Sbjct: 194 AADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVLIWVYVIACSAF 253

Query: 246 RNA 248
           RNA
Sbjct: 254 RNA 256

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1

 Score =  154 bits (388), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 141/240 (58%), Gaps = 2/240 (0%)

Query: 10  LLAITIIIFGVWMSTHHDN-CRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLI 68
           LL+I +I  G+W++    N C + L  PV+ LG LI ++ + GF+G     T LL +YLI
Sbjct: 17  LLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIGGFWRITWLLVVYLI 76

Query: 69  MLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKS 128
            + +++V +       +++T  GSGH      Y EY L+D+S W    +     W+R+++
Sbjct: 77  AMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLRRRVQRSYKWERIRT 136

Query: 129 CLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSN 188
           CL  +  C  L+++Y   + F +A L PI++GCC+PP +CG+  VN +Y+ +S    S++
Sbjct: 137 CLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFVNPTYW-ISPIDMSAD 195

Query: 189 KDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNA 248
            DC  + N +   CY CDSCKAG+   +K++W    IF L+  + L IVY +GCCA RNA
Sbjct: 196 MDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLIIVYIIGCCAFRNA 255

Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization, as well as cell differentiation. Regulates shoot apical meristem (SAM) organization in the peripheral zone. Required for initial meristematic divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis. Together with WIH peptides, promotes megasporogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1

 Score =  153 bits (386), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 140/247 (56%), Gaps = 6/247 (2%)

Query: 10  LLAITIIIFGVWMSTHHD--NCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYL 67
           LL+I I+  G+W+S+  +  +C R L  P++ +G  I +IS+ G  GA   N  L+W+YL
Sbjct: 17  LLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACYQNKFLMWLYL 76

Query: 68  IMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLK 127
             +  V+ A++ FT+ A+++T+ GSG  V   RY +Y L DYS W  + + +   W+ + 
Sbjct: 77  FTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIG 136

Query: 128 SCLVKSEDCNNLSKKY----KTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFH 183
           SC+  S  C  + +      +T   F    L+P+E+GCC+PP +CGY  VN + +     
Sbjct: 137 SCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGE 196

Query: 184 PTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCC 243
               N DC L+ N + + CY C SCKAGV   +K  WR V++ N+++ ++L I Y + C 
Sbjct: 197 MVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACA 256

Query: 244 ARRNAVR 250
           A +N  R
Sbjct: 257 AYQNVKR 263

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1

 Score =  152 bits (385), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 133/239 (55%), Gaps = 12/239 (5%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           L +I II   ++ +     C   L  P+L +G +I I+S+ GF+GA  N    LW+YL++
Sbjct: 18  LASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGFIGACFNVAWALWVYLVV 77

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           +  ++  ++  T+   ++T+ G G  V G  YKEY+L DY  W    + +PE W  ++SC
Sbjct: 78  MIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRERVRDPEYWNSIRSC 137

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           ++ S+ C  + + + TL  F+   +T +++GCC+PP  C Y    A   D          
Sbjct: 138 ILSSKTCTKI-ESWTTLDYFQR-DMTSVQSGCCKPPTACTY---EAGVVD-------GGG 185

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNA 248
           DC  + N   + CY CD+CKAGV + ++++WR +++ N+++ V+L  VY  GCCA  N 
Sbjct: 186 DCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCAFHNT 244

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
225426866	264	PREDICTED: uncharacterized protein LOC10	0.960	0.928	0.869	1e-124
255537399	266	conserved hypothetical protein [Ricinus	0.956	0.917	0.860	1e-123
224053941	263	predicted protein [Populus trichocarpa]	0.960	0.931	0.853	1e-122
225426864	258	PREDICTED: uncharacterized protein LOC10	0.945	0.934	0.842	1e-119
449452354	264	PREDICTED: uncharacterized protein LOC10	0.960	0.928	0.812	1e-119
356528074	264	PREDICTED: uncharacterized protein LOC10	0.960	0.928	0.816	1e-118
356513409	264	PREDICTED: uncharacterized protein LOC10	0.960	0.928	0.804	1e-115
297837069	264	hypothetical protein ARALYDRAFT_893123 [	0.960	0.928	0.783	1e-111
388496090	264	unknown [Lotus japonicus]	0.960	0.928	0.791	1e-107
42571973	258	tetraspanin10 [Arabidopsis thaliana] gi|	0.945	0.934	0.757	1e-106

>gi|225426866|ref|XP_002283515.1| PREDICTED: uncharacterized protein LOC100265107 isoform 1 [Vitis vinifera] gi|297742559|emb|CBI34708.3| unnamed protein product [Vitis vinifera]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/245 (86%), Positives = 227/245 (92%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           LLA+ +I FGVWMSTHHD CR+SLTLPVLGLGA IF+ISIIGF+GALKNN+ILLWIYLIM
Sbjct: 19  LLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMGALKNNSILLWIYLIM 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           LC +LVAILVFTVLAFIITNNGSGH+VAGLRYKEYQL+DYSSWFL  LNN  NWK LKSC
Sbjct: 79  LCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFLKQLNNTRNWKHLKSC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSEDCNNLSKKYKTLKQ+K AKLTPIEAGCCRPP ECGYP VNASYYDLSFHP SSNK
Sbjct: 139 LVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVNASYYDLSFHPISSNK 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCKLYKNSRA+KCYNCDSCKAGVAQYMK EWRVVAIFN++LFVVLS+VY VGCCARRNA 
Sbjct: 199 DCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLSMVYLVGCCARRNAT 258

Query: 250 RSRSK 254
            SRSK
Sbjct: 259 SSRSK 263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537399|ref|XP_002509766.1| conserved hypothetical protein [Ricinus communis] gi|223549665|gb|EEF51153.1| conserved hypothetical protein [Ricinus communis]

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/244 (86%), Positives = 227/244 (93%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           L+AI +IIFGVWMSTHHD+CRRSLTLPVLGLGA IF+ISIIGFLGALKNN+ILLWIYLIM
Sbjct: 21  LIAIAVIIFGVWMSTHHDSCRRSLTLPVLGLGAFIFLISIIGFLGALKNNSILLWIYLIM 80

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           LC++LVAILVFTVLAFIIT+N SGH+  GLRYKEYQL+DYSSWFL  LNN +NWKRLKSC
Sbjct: 81  LCIILVAILVFTVLAFIITDNASGHNAPGLRYKEYQLQDYSSWFLKQLNNTQNWKRLKSC 140

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSEDCNNLSKKYKTLKQ+KSAKLTPIEAGCCRPP  CGYP VNASY+DLSFHP SSNK
Sbjct: 141 LVKSEDCNNLSKKYKTLKQYKSAKLTPIEAGCCRPPSGCGYPAVNASYFDLSFHPVSSNK 200

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCKLYKNSRA+KCYNCDSCKAGVAQYMK EWRVVAIFN+ILFVVLS++YFVGCCARRN  
Sbjct: 201 DCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVILFVVLSMIYFVGCCARRNVA 260

Query: 250 RSRS 253
             RS
Sbjct: 261 GGRS 264

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053941|ref|XP_002298049.1| predicted protein [Populus trichocarpa] gi|222845307|gb|EEE82854.1| predicted protein [Populus trichocarpa]

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/245 (85%), Positives = 229/245 (93%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           LLAI +IIFGVWMSTHHD+CRRSLTLPVLGLGA+IF+ISIIGFLGALK+N+ILLWIYL+M
Sbjct: 19  LLAIAVIIFGVWMSTHHDSCRRSLTLPVLGLGAVIFVISIIGFLGALKSNSILLWIYLVM 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           LC++LVAILVFTVLAFIITNNGSGHSV GLRYKEYQL+DYSSWFL  LNN +NW RLKSC
Sbjct: 79  LCIILVAILVFTVLAFIITNNGSGHSVPGLRYKEYQLQDYSSWFLKQLNNTKNWNRLKSC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVK++DCNNL +KYKT+KQ+KSAKLT IEAGCCRPP  CGYP VNASYYDLSFHP SSNK
Sbjct: 139 LVKTDDCNNLPRKYKTIKQYKSAKLTAIEAGCCRPPSVCGYPAVNASYYDLSFHPISSNK 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCKLYKNSRA KCYNCDSCKAGVAQYMK EWRVVAIFN+ILFVVLS++YFVGCCARR+A 
Sbjct: 199 DCKLYKNSRATKCYNCDSCKAGVAQYMKTEWRVVAIFNVILFVVLSMIYFVGCCARRSAA 258

Query: 250 RSRSK 254
           RS SK
Sbjct: 259 RSHSK 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426864|ref|XP_002283528.1| PREDICTED: uncharacterized protein LOC100265107 isoform 2 [Vitis vinifera]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/247 (84%), Positives = 221/247 (89%), Gaps = 6/247 (2%)

Query: 8   VQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYL 67
             LLA+ +I FGVWMSTHHD CR+SLTLPVLGLGA IF+ISIIGF+GALKNN+ILLWIYL
Sbjct: 17  TMLLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMGALKNNSILLWIYL 76

Query: 68  IMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLK 127
           IMLC +LVAILVFTVLAFIITNNGSGH+VAGLRYKEYQL+DYSSWFL  LNN  NWK LK
Sbjct: 77  IMLCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFLKQLNNTRNWKHLK 136

Query: 128 SCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSS 187
           SCLVKSEDCNNLSKKYKTLKQ+K AKLTPIEAGCCRPP ECGYP VNASYYDLSFHP SS
Sbjct: 137 SCLVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVNASYYDLSFHPISS 196

Query: 188 NKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRN 247
           NKDCKLYKNSRA+KCYNCDSCKAGVAQYMK EWRVVAIFN      +S+VY VGCCARRN
Sbjct: 197 NKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFN------VSMVYLVGCCARRN 250

Query: 248 AVRSRSK 254
           A  SRSK
Sbjct: 251 ATSSRSK 257

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452354|ref|XP_004143924.1| PREDICTED: uncharacterized protein LOC101222956 [Cucumis sativus] gi|449495842|ref|XP_004159961.1| PREDICTED: uncharacterized protein LOC101226746 [Cucumis sativus]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 199/245 (81%), Positives = 222/245 (90%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
            LAI +IIFG+WM THHD CR+SLTLPV+GLG  IF++SI+GFLGALKNN+ILLWIYLIM
Sbjct: 19  FLAILVIIFGIWMGTHHDGCRKSLTLPVMGLGGFIFVVSIVGFLGALKNNSILLWIYLIM 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           LC+ LV ILVFTVLAFI+TNNGSGH VAGLRYKEYQL+DYS+WFL  LNN ENW RLKSC
Sbjct: 79  LCITLVGILVFTVLAFIVTNNGSGHDVAGLRYKEYQLQDYSTWFLKQLNNTENWMRLKSC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSEDCNNLSK+YKTLKQ+K AKLTP+EAGCCRPP ECGYP VNASYYDLSFHP +SN 
Sbjct: 139 LVKSEDCNNLSKRYKTLKQYKLAKLTPMEAGCCRPPSECGYPAVNASYYDLSFHPVNSNH 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCK+YKNS+AVKCY+CDSCKAGVAQYMK EWR+VAIFN+ILFVVL I+Y VGCCARR A 
Sbjct: 199 DCKVYKNSKAVKCYDCDSCKAGVAQYMKTEWRLVAIFNVILFVVLLIIYLVGCCARRKAA 258

Query: 250 RSRSK 254
           R+RSK
Sbjct: 259 RNRSK 263

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528074|ref|XP_003532630.1| PREDICTED: uncharacterized protein LOC100805679 [Glycine max]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 200/245 (81%), Positives = 222/245 (90%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           LLAI +IIFGVWMSTHHD CR+SLT+PV+GLGA+IF+IS++GFLGALKNN+ILLWIYLI 
Sbjct: 19  LLAIVVIIFGVWMSTHHDGCRKSLTVPVIGLGAVIFLISVVGFLGALKNNSILLWIYLIT 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           L  VLV ILVFTVL FI+TNNGSGHSV GLRYKEYQL+D+SS FL  LNN  NW+RLK C
Sbjct: 79  LFFVLVGILVFTVLVFIVTNNGSGHSVTGLRYKEYQLQDFSSLFLKELNNSRNWERLKVC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSEDCNNLSKKYKTLKQ+KSAKL+PIEAGCCRPP +CGYP VNASYYDL+FHP S N 
Sbjct: 139 LVKSEDCNNLSKKYKTLKQYKSAKLSPIEAGCCRPPSQCGYPAVNASYYDLTFHPVSPNN 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCK YKNSRA+KCY+CDSCKAGVAQYMK EWRVVAIFN++LFVVLSI+YFVGCCARRNA 
Sbjct: 199 DCKRYKNSRAIKCYDCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLSIIYFVGCCARRNAA 258

Query: 250 RSRSK 254
           RS SK
Sbjct: 259 RSHSK 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513409|ref|XP_003525406.1| PREDICTED: uncharacterized protein LOC100801365 [Glycine max]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/245 (80%), Positives = 219/245 (89%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           LLAI +IIFGVWMSTHHD CR+SLT+PV+GLGA+IF+IS++GFLGALKN +ILLWIYLI 
Sbjct: 19  LLAIAVIIFGVWMSTHHDGCRKSLTVPVIGLGAVIFLISVVGFLGALKNISILLWIYLIT 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           L  VLV ILVFTVL FI+TNNGSGHSV GLRYKEYQL+D+SSWFL  LNN  NW+RLK C
Sbjct: 79  LFFVLVGILVFTVLVFIVTNNGSGHSVTGLRYKEYQLQDFSSWFLKELNNSRNWERLKVC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKS+DCNNLSKKYKT KQ+KSAKL+PIEAGCCRPP +CGYP VNASYYDL+FHP S N 
Sbjct: 139 LVKSDDCNNLSKKYKTPKQYKSAKLSPIEAGCCRPPSQCGYPAVNASYYDLTFHPVSPNN 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCK YKN RAVKCY+CDSCKAGVAQYMK EWRVVAIFN++LFVVL I+YFVGCCARRNA 
Sbjct: 199 DCKRYKNYRAVKCYDCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLCIIYFVGCCARRNAA 258

Query: 250 RSRSK 254
           RS SK
Sbjct: 259 RSHSK 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297837069|ref|XP_002886416.1| hypothetical protein ARALYDRAFT_893123 [Arabidopsis lyrata subsp. lyrata] gi|297332257|gb|EFH62675.1| hypothetical protein ARALYDRAFT_893123 [Arabidopsis lyrata subsp. lyrata]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/245 (78%), Positives = 211/245 (86%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           LLA+ +IIFGVWMSTH+D CRRSLT PV+ LG  IF+ISIIGFLGA K +  LLWIYL +
Sbjct: 19  LLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYLAV 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           L +VL+AILVFTVLAFI+TNNGSGH+  GLRYKEY+L DYSSWFL  LNN  NW RLKSC
Sbjct: 79  LLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLKSC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSE C  LSKKYKT+KQ KSA+LTPIEAGCCRPP ECGYP VNASYYDLSFH  SSNK
Sbjct: 139 LVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVNASYYDLSFHSISSNK 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCKLYKN R +KCYNCDSCKAGVAQYMK EWR+VAIFN++LFVVLS+VYFVGCCARRNA 
Sbjct: 199 DCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVLSMVYFVGCCARRNAA 258

Query: 250 RSRSK 254
             RSK
Sbjct: 259 SYRSK 263

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496090|gb|AFK36111.1| unknown [Lotus japonicus]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/245 (79%), Positives = 221/245 (90%)

Query: 10  LLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIM 69
           L AI +I+FGVWMSTHHD+CR+SLT+PVLGLGA+I +IS++GFLGALKN +ILLWIYLI+
Sbjct: 19  LSAIVVIMFGVWMSTHHDSCRKSLTVPVLGLGAVISLISMVGFLGALKNWSILLWIYLIL 78

Query: 70  LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
           L LVLV ILVFTVL FI+TN+GSGHSV GLRYKEYQL+DYSSWFL  LNN  NW+RL+ C
Sbjct: 79  LFLVLVGILVFTVLVFIVTNDGSGHSVTGLRYKEYQLQDYSSWFLKELNNSHNWERLRVC 138

Query: 130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
           LVKSEDC+ LSKKYK LKQ+K AKLTP+EAGCCRPP ECGYP VNASYYDL+FHP S NK
Sbjct: 139 LVKSEDCHKLSKKYKNLKQYKLAKLTPMEAGCCRPPSECGYPAVNASYYDLTFHPVSPNK 198

Query: 190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNAV 249
           DCK YKNS+A+KCY+CDSCKAGVAQYMK EWRVVAIFN++LFVVLS++YFVGCCARRNA 
Sbjct: 199 DCKRYKNSQAIKCYDCDSCKAGVAQYMKTEWRVVAIFNVVLFVVLSVIYFVGCCARRNAS 258

Query: 250 RSRSK 254
           RS SK
Sbjct: 259 RSHSK 263

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571973|ref|NP_974077.1| tetraspanin10 [Arabidopsis thaliana] gi|42600563|gb|AAS21128.1| At1g63260 [Arabidopsis thaliana] gi|45773872|gb|AAS76740.1| At1g63260 [Arabidopsis thaliana] gi|332195956|gb|AEE34077.1| tetraspanin10 [Arabidopsis thaliana]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/247 (75%), Positives = 205/247 (82%), Gaps = 6/247 (2%)

Query: 8   VQLLAITIIIFGVWMSTHHDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYL 67
             LLA+ +IIFGVWMSTH+D CRRSLT PV+ LG  IF+ISIIGFLGA K +  LLWIYL
Sbjct: 17  TMLLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYL 76

Query: 68  IMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLK 127
            +L +VL+AILVFTVLAFI+TNNGSGH+  GLRYKEY+L DYSSWFL  LNN  NW RLK
Sbjct: 77  AVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLK 136

Query: 128 SCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSS 187
           SCLVKSE C  LSKKYKT+KQ KSA+LTPIEAGCCRPP ECGYP VNASYYDLSFH  SS
Sbjct: 137 SCLVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVNASYYDLSFHSISS 196

Query: 188 NKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRN 247
           NKDCKLYKN R +KCYNCDSCKAGVAQYMK EWR+VAIFN      +S+VYFVGCCARRN
Sbjct: 197 NKDCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFN------VSMVYFVGCCARRN 250

Query: 248 AVRSRSK 254
           A   RSK
Sbjct: 251 AASYRSK 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2038488	284	TET10 "tetraspanin10" [Arabido	0.882	0.792	0.724	7.5e-89
TAIR|locus:2048982	273	TET8 "AT2G23810" [Arabidopsis	0.988	0.923	0.373	1.4e-46
TAIR|locus:2118696	272	TET9 "AT4G30430" [Arabidopsis	0.980	0.919	0.351	5.7e-43
TAIR|locus:2132992	263	TET7 "AT4G28050" [Arabidopsis	0.949	0.920	0.336	2.8e-41
TAIR|locus:2085692	285	TET3 "AT3G45600" [Arabidopsis	0.945	0.845	0.315	4.6e-41
TAIR|locus:2144050	327	TET4 "tetraspanin4" [Arabidops	0.945	0.737	0.323	3.3e-40
TAIR|locus:2050354	270	TET2 "AT2G19580" [Arabidopsis	0.925	0.874	0.345	1.8e-39
TAIR|locus:2178570	269	TRN2 "AT5G46700" [Arabidopsis	0.933	0.884	0.341	1.6e-38
TAIR|locus:2014054	271	TET11 "AT1G18520" [Arabidopsis	0.937	0.881	0.315	2.1e-36
TAIR|locus:2099272	282	TET6 "AT3G12090" [Arabidopsis	0.917	0.829	0.290	2.5e-33

TAIR|locus:2038488 TET10 "tetraspanin10" [Arabidopsis thaliana (taxid:3702)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 163/225 (72%), Positives = 179/225 (79%)

Query:    10 LLAITIIIFGVWMSTHHDNCRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWIYLIM 69
             LLA+ +IIFGVWMSTH+D CRRSLT PV                   K +  LLWIYL +
Sbjct:    19 LLAVAVIIFGVWMSTHNDGCRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYLAV 78

Query:    70 LCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSC 129
             L +VL+AILVFTVLAFI+TNNGSGH+  GLRYKEY+L DYSSWFL  LNN  NW RLKSC
Sbjct:    79 LLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLKSC 138

Query:   130 LVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNK 189
             LVKSE C  LSKKYKT+KQ KSA+LTPIEAGCCRPP ECGYP VNASYYDLSFH  SSNK
Sbjct:   139 LVKSEQCRKLSKKYKTIKQLKSAELTPIEAGCCRPPSECGYPAVNASYYDLSFHSISSNK 198

Query:   190 DCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVL 234
             DCKLYKN R +KCYNCDSCKAGVAQYMK EWR+VAIFN++LFVVL
Sbjct:   199 DCKLYKNLRTIKCYNCDSCKAGVAQYMKTEWRLVAIFNVVLFVVL 243

GO:0005576 "extracellular region" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2048982 TET8 "AT2G23810" [Arabidopsis thaliana (taxid:3702)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 96/257 (37%), Positives = 145/257 (56%)

Query:     2 LIYISN--VQLLAITIIIFGVWMSTHHDN-CRRSLTLPVXXXXXXXXXXXXXXXXXXXKN 58
             L+ I N  V LL+I I+  G+W+S      C R L  PV                     
Sbjct:     8 LVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGSCCR 67

Query:    59 NTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLN 118
              T LLW+YL ++ L+++ +   TV AF++TN G+G ++ G  YKEY+L DYS+W    + 
Sbjct:    68 VTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVE 127

Query:   119 NPENWKRLKSCLVKSEDCNNLSKKYKTL--KQFKSAKLTPIEAGCCRPPFECGYPVVNAS 176
             N +NW +++SCLV+S+ C+ L  K+  +    F    LT +++GCC+P  ECG+  VN +
Sbjct:   128 NGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPT 187

Query:   177 YYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSI 236
              +  +   T +N DC+ + N++   C++C SCKAG+   +K  W+ VAI N++  V L I
Sbjct:   188 TWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLII 247

Query:   237 VYFVGCCARRNAVRSRS 253
             VY VGCCA RN  R  S
Sbjct:   248 VYSVGCCAFRNNKRDDS 264

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2118696 TET9 "AT4G30430" [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 90/256 (35%), Positives = 139/256 (54%)

Query:     2 LIYISN--VQLLAITIIIFGVWMSTHHDN-CRRSLTLPVXXXXXXXXXXXXXXXXXXXKN 58
             L+ I N  V LL++ I+  G+W+S      C R L  P+                     
Sbjct:     8 LVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGSCCR 67

Query:    59 NTILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLN 118
              T LLW YL ++  +++ +L FT+ AF++T+ GSG ++ G  YKEY+L+ YS W    +N
Sbjct:    68 VTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQRRVN 127

Query:   119 NPENWKRLKSCLVKSEDCNNLS--KKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNAS 176
             N ++W  ++SCL +S+ C NL       T+  F    LT  E+GCC+P  +C +  + ++
Sbjct:   128 NAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFTYITST 187

Query:   177 YYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSI 236
              ++ +   T  N DC+L+ N +   CYNC +CKAG    +K  W+ VAI N+I  V+L +
Sbjct:   188 TWNKT-SGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNIIFLVLLVV 246

Query:   237 VYFVGCCARRNAVRSR 252
             VY +GCCA RN    R
Sbjct:   247 VYAMGCCAFRNNKEDR 262

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2132992 TET7 "AT4G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 83/247 (33%), Positives = 136/247 (55%)

Query:    10 LLAITIIIFGVWMSTHH-DNCRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWIYLI 68
             LL+I I+  G+W+  +    C R L  P+                      + LLW+YL 
Sbjct:    18 LLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGACCRVSCLLWLYLF 77

Query:    69 MLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKS 128
              + L+++    FT+ AF +TN G+G  ++   YKEY + DYS+W    +NN +NW+R++S
Sbjct:    78 AMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQKRVNNAKNWERIRS 137

Query:   129 CLVKSEDCNNLSKKYKTL--KQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTS 186
             CL+ S+ C+    +Y ++  + F  + L  +++GCC+P  +C +  VN + +  +  P  
Sbjct:   138 CLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFTYVNPTTWTKTPGPYK 197

Query:   187 SNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARR 246
              N+DC ++ N     CY+C++CKAG+   +K  W+ VA  N++  + L IVY VGCCA R
Sbjct:   198 -NEDCNVWDNKPGTLCYDCEACKAGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVGCCAFR 256

Query:   247 NAVRSRS 253
             N  R RS
Sbjct:   257 NN-RKRS 262

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2085692 TET3 "AT3G45600" [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 78/247 (31%), Positives = 136/247 (55%)

Query:    10 LLAITIIIFGVWMSTHHDN--CRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWIYL 67
             LL+I I+  G+W+S+  ++  C R L  P+                     N  L+W+YL
Sbjct:    17 LLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGACYRNKFLMWLYL 76

Query:    68 IMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLK 127
             +++ L++ A++ F + A+ +T+ GSG +V    Y +Y L+DYS W  + +++   W ++ 
Sbjct:    77 VVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWLKDRVSDDSYWGKIS 136

Query:   128 SCLVKSEDCNNLSKKY----KTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFH 183
             SCL  S  C  + + +    +T   F   +L+P+E+GCC+PP +CG+  VN + +D    
Sbjct:   137 SCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGG 196

Query:   184 PTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCC 243
                 N+DC ++ N +++ CY C SCKAGV   +K  WR V++ N+++ ++L I Y +   
Sbjct:   197 MIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYA 256

Query:   244 ARRNAVR 250
             A RN  R
Sbjct:   257 AYRNVKR 263

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2144050 TET4 "tetraspanin4" [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 80/247 (32%), Positives = 129/247 (52%)

Query:    10 LLAITIIIFGVWMSTHHDN--CRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWIYL 67
             LL+I I+  G+W+S+  ++  C R L  P+                     N  L+W+YL
Sbjct:    17 LLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACYQNKFLMWLYL 76

Query:    68 IMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLK 127
               +  V+ A++ FT+ A+++T+ GSG  V   RY +Y L DYS W  + + +   W+ + 
Sbjct:    77 FTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIG 136

Query:   128 SCLVKSEDCNNLSKKY----KTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFH 183
             SC+  S  C  + +      +T   F    L+P+E+GCC+PP +CGY  VN + +     
Sbjct:   137 SCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGE 196

Query:   184 PTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCC 243
                 N DC L+ N + + CY C SCKAGV   +K  WR V++ N+++ ++L I Y + C 
Sbjct:   197 MVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACA 256

Query:   244 ARRNAVR 250
             A +N  R
Sbjct:   257 AYQNVKR 263

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2050354 TET2 "AT2G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 84/243 (34%), Positives = 136/243 (55%)

Query:    10 LLAITIIIFGVWMSTHHDN-CRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWIYLI 68
             L +I I   G+W+++  DN C   L  PV                   K    LL +YL 
Sbjct:    17 LCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIGAYKYKETLLAVYLC 76

Query:    69 MLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKS 128
              + +++  +LV  + AF++T     + V G  YKEY+L+ +S+W   ++ + +NW RL++
Sbjct:    77 CMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLKENVVDSKNWGRLRA 136

Query:   129 CLVKSEDCNNLSKKYKTLKQF-KSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTS- 186
             CL  +  C  L++++ T  QF  S+K+TP+++GCC+PP  CGY  VN + +    +PT+ 
Sbjct:   137 CLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYNFVNPTLW---LNPTNM 193

Query:   187 -SNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCAR 245
              ++ DC L+ N ++  CYNC+SCKAG+   ++ EWR   +  +I  VVL  VY + C A 
Sbjct:   194 AADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVVVLIWVYVIACSAF 253

Query:   246 RNA 248
             RNA
Sbjct:   254 RNA 256

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2178570 TRN2 "AT5G46700" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 82/240 (34%), Positives = 129/240 (53%)

Query:    10 LLAITIIIFGVWMSTHHDN-CRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWIYLI 68
             LL+I +I  G+W++    N C + L  PV                      T LL +YLI
Sbjct:    17 LLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIGGFWRITWLLVVYLI 76

Query:    69 MLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKS 128
              + +++V +       +++T  GSGH      Y EY L+D+S W    +     W+R+++
Sbjct:    77 AMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGWLRRRVQRSYKWERIRT 136

Query:   129 CLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSN 188
             CL  +  C  L+++Y   + F +A L PI++GCC+PP +CG+  VN +Y+ +S    S++
Sbjct:   137 CLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTFVNPTYW-ISPIDMSAD 195

Query:   189 KDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFVGCCARRNA 248
              DC  + N +   CY CDSCKAG+   +K++W    IF L+  + L IVY +GCCA RNA
Sbjct:   196 MDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIGLIIVYIIGCCAFRNA 255

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0009956 "radial pattern formation" evidence=IMP

GO:0010015 "root morphogenesis" evidence=RCA;IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2014054 TET11 "AT1G18520" [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 78/247 (31%), Positives = 136/247 (55%)

Query:     8 VQLLAITIIIFGVWMSTHHD--NCRRSLTLPVXXXXXXXXXXXXXXXXXXXKNNTILLWI 65
             V L+  + I + ++M  H    +C  ++ +P+                       + +  
Sbjct:    16 VMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVIGSCFKENLAMVS 75

Query:    66 YLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPENWKR 125
             YLI+L   +VA+++F++  F +TN G+G  V+G  YKEY+  D+S+W LN     + W  
Sbjct:    76 YLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTW-LNGFVGGKRWVG 134

Query:   126 LKSCLVKSEDCNNLS--KKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYY-DLSF 182
             ++SCL ++  C++LS  +  +    F    L+PI++GCC+PP +C +   NA+++   S 
Sbjct:   135 IRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSK 194

Query:   183 HPTS--SNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYFV 240
             + T+   N DC  + N +   C+NC++CKAGV   ++ +WR + +FN+ L ++L  VY  
Sbjct:   195 NETAVAENGDCGTWSNVQTELCFNCNACKAGVLANIREKWRNLLVFNICLLILLITVYSC 254

Query:   241 GCCARRN 247
             GCCARRN
Sbjct:   255 GCCARRN 261

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2099272 TET6 "AT3G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 72/248 (29%), Positives = 124/248 (50%)

Query:     2 LIYISNVQLLAITIIIFG--VWMSTHHDNCRRSLTLPVXXXXXXXXXXXXXXXXXXXKNN 59
             +I + N+  L  +I I G  ++ +     C   L  P+                    N 
Sbjct:     8 VIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGFIGACFNV 67

Query:    60 TILLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNN 119
                LW+YL+++  ++  ++  T+   ++T+ G G  V G  YKEY+L DY  W    + +
Sbjct:    68 AWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRERVRD 127

Query:   120 PENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGYPVVNASYYD 179
             PE W  ++SC++ S+ C  + + + TL  F+   +T +++GCC+PP  C Y    A   D
Sbjct:   128 PEYWNSIRSCILSSKTCTKI-ESWTTLDYFQR-DMTSVQSGCCKPPTACTY---EAGVVD 182

Query:   180 LSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYF 239
                       DC  + N   + CY CD+CKAGV + ++++WR +++ N+++ V+L  VY 
Sbjct:   183 -------GGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 235

Query:   240 VGCCARRN 247
              GCCA  N
Sbjct:   236 AGCCAFHN 243

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	9e-21

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score = 87.1 bits (216), Expect = 9e-21
 Identities = 43/248 (17%), Positives = 91/248 (36%), Gaps = 52/248 (20%)

Query: 10  LLAITIIIFGVWMSTH--------HDNCRRSLTLPVLGLGALIFIISIIGFLGALKNNTI 61
           LL + ++  G+W+            ++  R+L + ++ LG +I ++  +G  GA+K +  
Sbjct: 15  LLGLALLAVGIWLLVIAKDYLAIALNDSIRALYILIIVLGVIILLVGFLGCCGAIKESRC 74

Query: 62  LLWIYLIMLCLVLVAILVFTVLAFIITNNGSGHSVAGLRYKEYQLKDYSSWFLNHLNNPE 121
           LL  Y I+L ++ +  +   +LAF+  +                LK+  ++     N+  
Sbjct: 75  LLLTYFILLLILFILEIAAGILAFVYRDKLES-----------SLKEGLNYKDKSYNDDP 123

Query: 122 NWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRPPFECGY--PVVNASYYD 179
           N       L KS +C                               CG            
Sbjct: 124 NLTEAIDELQKSLEC-------------------------------CGVNSYTDWLDSQY 152

Query: 180 LSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNLILFVVLSIVYF 239
            S   ++ + DC  + N  +      + CK  + +++K   +++    L + V+  +   
Sbjct: 153 FSPSSSNPDSDCCCWNNDTSNLNIYTEGCKEKLLEFLKKNLKIIGGVGLGIAVIQLLGII 212

Query: 240 VGCCARRN 247
           + CC  R+
Sbjct: 213 LACCLCRS 220

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
KOG3882	237	consensus Tetraspanin family integral membrane pro	100.0
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.89
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	99.51
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	99.5
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	99.5
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	99.48
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	99.46
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	99.45
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	99.44
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	99.42
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	99.42
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	99.42
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	99.41
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	99.38
cd03157	103	TM4SF12_like_LEL Tetraspanin, extracellular domain	99.35
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	99.29
cd03127	90	tetraspanin_LEL Tetraspanin, extracellular domain	99.23
cd03152	84	CD9_LEL Tetraspanin, extracellular domain or large	99.07
cd03151	84	CD81_like_LEL Tetraspanin, extracellular domain or	98.51
PRK12585	197	putative monovalent cation/H+ antiporter subunit G	86.18
PF14967	327	FAM70: FAM70 protein	85.06

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=100.00  E-value=5e-38  Score=269.14  Aligned_cols=209  Identities=18%  Similarity=0.388  Sum_probs=166.8

Q ss_pred             chHHHHH--HHHHHHHHHHHHHhc-ccCcchhh----h--hhhhHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 025283            2 LIYISNV--QLLAITIIIFGVWMS-THHDNCRR----S--LTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCL   72 (255)
Q Consensus         2 ll~~~N~--~l~G~~ll~~Giw~~-~~~~~~~~----~--~~~~li~~G~~~~~i~~lG~~ga~~es~~lL~~y~~ll~v   72 (255)
                      ++|++|+  |++|++++++|+|++ ++.....-    +  ..+.++++|.+++++|++||+||.|||+|+|.+|++++++
T Consensus        12 ~lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~~es~~lL~~y~~~l~l   91 (237)
T KOG3882|consen   12 LLFLLNLLFWLLGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGALRESRCLLLSYFILLLL   91 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhHhhhHHHHHHHHHHHHH
Confidence            5789999  799999999999999 87642221    1  2466999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhheeEecCCCccc---ccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhh
Q 025283           73 VLVAILVFTVLAFIITNNGSGHS---VAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQF  149 (255)
Q Consensus        73 l~~~ei~~~i~~~~~~~~~~~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw  149 (255)
                      ++++|+++++++++++++++++.   ..++.++.|+.+++         ..+.||.+|+    +++|||++|    |.||
T Consensus        92 ~~i~e~~~~i~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~---------~~~~~d~~Q~----~~~CCG~~~----~~~~  154 (237)
T KOG3882|consen   92 LFIAELAAGILAFVFRDSLRDELEEQLLKSIWNNYSSDPD---------LGEAWDKLQR----ELKCCGVNG----YSDY  154 (237)
T ss_pred             HHHHHHHHHHHhheeHHHHHHHHHHHHHHHHHHHhCCCcc---------HHHHHHHHHH----hccCCcCCC----chHH
Confidence            99999999999999999987632   23444555655442         2379999999    999999999    9999


Q ss_pred             hhCCCCCCCCCCcCCCCC-CCCCccCCcccccCCCCCCCCcccccccCCCceeeeeCcchHHHHHHHHHHhHHHHHHHHH
Q 025283          150 KSAKLTPIEAGCCRPPFE-CGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAIFNL  228 (255)
Q Consensus       150 ~~~~~~~vP~SCC~~~~~-C~~~~~~~~~~~~~~~g~~~~~~c~~~~~~~~~~C~~~~gC~~~~~~~l~~~~~~v~~~~~  228 (255)
                      .+.+...+|+|||++... ......++.                    .      +.+||.+++.+|+++++..++++++
T Consensus       155 ~~~~~~~vP~SCC~~~~~~~~~~~~~~~--------------------~------~~~GC~~~~~~~~~~~~~~i~~~~~  208 (237)
T KOG3882|consen  155 FNCSSNNVPPSCCKRTRRQKFPQDVPDN--------------------I------YTEGCLEKLSSWLESNLLIIGGVGL  208 (237)
T ss_pred             hcCCCCCCCcccCCCcccccccccchhh--------------------h------hccccHHHHHHHHHHhhHHHHHHHH
Confidence            876522299999986111 110001111                    1      2444459999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccccccC
Q 025283          229 ILFVVLSIVYFVGCCARRNAVRSRS  253 (255)
Q Consensus       229 ~~~~lqi~~~~~a~~l~~~~~~~~~  253 (255)
                      +++++|++++++|+++.+++++++.
T Consensus       209 ~i~~~~~~~~~~a~~l~~~i~~~~~  233 (237)
T KOG3882|consen  209 GIAVLELLGMILACCLANAIRNQRD  233 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999998877653

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.89  E-value=1.9e-25  Score=186.40  Aligned_cols=201  Identities=22%  Similarity=0.436  Sum_probs=41.5

Q ss_pred             chHHHHH--HHHHHHHHHHHHHhc-ccCcc--h-h---hhhhhhHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 025283            2 LIYISNV--QLLAITIIIFGVWMS-THHDN--C-R---RSLTLPVLGLGALIFIISIIGFLGALKNNTILLWIYLIMLCL   72 (255)
Q Consensus         2 ll~~~N~--~l~G~~ll~~Giw~~-~~~~~--~-~---~~~~~~li~~G~~~~~i~~lG~~ga~~es~~lL~~y~~ll~v   72 (255)
                      +++++|+  +++|++++++|+|++ ..+..  . .   ......++++|+++++++++|++|+.++||+++..|.+++++
T Consensus         5 ~l~~~n~l~~l~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~~~~~   84 (221)
T PF00335_consen    5 ILFFLNVLFLLLGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYIILLIL   84 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccchhh
Confidence            4667888  699999999999994 32211  1 1   122455778999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhheeEecCCCcccccchhh-----hhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChh
Q 025283           73 VLVAILVFTVLAFIITNNGSGHSVAGLRY-----KEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLK  147 (255)
Q Consensus        73 l~~~ei~~~i~~~~~~~~~~~~~~~~~~~-----~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~  147 (255)
                      +++++++.+++++.++++.+...  ++..     +.+..++         ..++.||.+|+    +++|||.++    |+
T Consensus        85 ~~v~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~iq~----~~~CCG~~~----~~  145 (221)
T PF00335_consen   85 LFVLELVVGIVAFSYRDQLNSSL--KDGLSLRCMKSYNSNE---------SFSEAWDNIQE----KFECCGVNS----PD  145 (221)
T ss_dssp             ---------------HHHHHHHH--HHHHHHHHHHSSTT-C---------HHHHHHHHHHH----HHT--SSTT----CH
T ss_pred             HHHHHHHHHHhhhhccccccccc--cccccchhhhcccccc---------chhhheecccc----cccccCCCC----Cc
Confidence            99999999999999888755421  1111     1111111         25789999999    999999999    99


Q ss_pred             hhhhCCC--CCCCCCCcCCCCCCCCCccCCcccccCCCCCCCCcccccccCCCceeeeeCcchHHHHHHHHHHhHHHHHH
Q 025283          148 QFKSAKL--TPIEAGCCRPPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVAI  225 (255)
Q Consensus       148 Dw~~~~~--~~vP~SCC~~~~~C~~~~~~~~~~~~~~~g~~~~~~c~~~~~~~~~~C~~~~gC~~~~~~~l~~~~~~v~~  225 (255)
                      ||.....  ...|++|..+ ..+..                    +...+      ..+.+||.+++.++++++...+++
T Consensus       146 d~~~~~~~~~~~~~~~~~~-~~~~~--------------------~~~~~------~~~~~gC~~~l~~~~~~~~~~~~~  198 (221)
T PF00335_consen  146 DWFTSKWSSCSSPDSCPDC-QCPDD--------------------CSSEN------SIYTRGCYDKLREYLRSYLKYIGI  198 (221)
T ss_dssp             HHHHHHHHT---------T-CS-TT--------------------CCCCH------CCTST-HHHHHHHHHCT-------
T ss_pred             ccccccccccccccccccc-ccccc--------------------ccccc------cccCCChHHHHHHHHHHHHHHHHH
Confidence            9975421  1111111100 00000                    00000      224567779999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcc
Q 025283          226 FNLILFVVLSIVYFVGCCARRNA  248 (255)
Q Consensus       226 ~~~~~~~lqi~~~~~a~~l~~~~  248 (255)
                      ++++++++|++++++|+++.|++
T Consensus       199 ~~~~~~~l~~~~~~~a~~l~~~~  221 (221)
T PF00335_consen  199 VSLAILVLQLIGIILACCLCRHI  221 (221)
T ss_dssp             -----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999988864

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=99.51  E-value=3.6e-15  Score=110.78  Aligned_cols=69  Identities=7%  Similarity=0.014  Sum_probs=50.4

Q ss_pred             HhhheeEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCCCCCCC
Q 025283           81 TVLAFIITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIE  158 (255)
Q Consensus        81 ~i~~~~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~~~~vP  158 (255)
                      ||++|+++++++..  ..+.+.+++|+.++.        ..+.+||.+|+    +|+|||+++    |.||..   ..+|
T Consensus         1 gi~~~v~r~~i~~~i~~~~~~~i~~y~~~~~--------~~~~~~d~lQ~----~l~CCG~~~----~~d~~~---~~vP   61 (100)
T cd03154           1 GIVGAVYKPKIENELKEKNTKLLSLLGQNAK--------SVKKSLEKFQK----ELKCCGLVN----GADDWG---NDIP   61 (100)
T ss_pred             CEEEEEeHHHHHHHHHHHHHHHHHHcCCChH--------HHHHHHHHHHH----cCCCCCCCC----chhhcc---CCCC
Confidence            57889999987652  345667777754311        25789999999    999999999    888864   2599


Q ss_pred             CCCcC-CCCCC
Q 025283          159 AGCCR-PPFEC  168 (255)
Q Consensus       159 ~SCC~-~~~~C  168 (255)
                      +|||+ ++.+|
T Consensus        62 ~SCcc~~~~~c   72 (100)
T cd03154          62 ASCNCTTTQSD   72 (100)
T ss_pred             CCCcCCCCCCC
Confidence            99964 33444

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=99.50  E-value=5.1e-15  Score=110.93  Aligned_cols=95  Identities=8%  Similarity=0.257  Sum_probs=61.8

Q ss_pred             heeEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC------CC
Q 025283           84 AFIITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK------LT  155 (255)
Q Consensus        84 ~~~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~------~~  155 (255)
                      +++++++++..  ..+.+.+++|+.++         ..+.+||.+|+    +|+|||+++    |+||....      ..
T Consensus         1 ~~v~~~~v~~~~~~~~~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~   63 (105)
T cd03163           1 GYVYRAKVEDELNPSIDKVFNKYNGTN---------AESRAVDYLQR----QLQCCGIHN----YTDWENTPWFKESKNN   63 (105)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHH----hCcccCCCC----HHHHhhchhhhcCCCC
Confidence            35677776542  23455666665432         24789999999    999999999    99996421      24


Q ss_pred             CCCCCCcCCC-CCCCCCccCCcccccCCCCCCCCcccccccCCCceeeeeCcchHHHHHHHHHHhH
Q 025283          156 PIEAGCCRPP-FECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEW  220 (255)
Q Consensus       156 ~vP~SCC~~~-~~C~~~~~~~~~~~~~~~g~~~~~~c~~~~~~~~~~C~~~~gC~~~~~~~l~~~~  220 (255)
                      .||.|||..+ ..|+.......                   ..+++||+      +++.+|+++++
T Consensus        64 ~vP~SCC~~~~~~C~~~~~~~~-------------------~i~~~GC~------~~~~~~~~~~~  104 (105)
T cd03163          64 SVPLSCCKETFTSCTGSLTQPK-------------------DLYQEGCE------AKLVKKLQEVM  104 (105)
T ss_pred             ccCcCccCCCCCCcccCCCCCC-------------------chhhhccH------HHHHHHHHHHh
Confidence            6999999643 35753211100                   11222266      99999999875

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=99.50  E-value=5.9e-15  Score=110.21  Aligned_cols=68  Identities=12%  Similarity=0.312  Sum_probs=47.8

Q ss_pred             eEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC---CCCCCCC
Q 025283           86 IITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK---LTPIEAG  160 (255)
Q Consensus        86 ~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~---~~~vP~S  160 (255)
                      ++++++...  ..+.+++++|..++         ..+.+||.+|+    +|+|||+++    |+||....   ...||.|
T Consensus         2 v~r~~i~~~l~~~l~~~i~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~vP~S   64 (104)
T cd03161           2 VFRHEIKGTFLRTYNEAVSNYNGDD---------ERSDAVDTVQR----TLHCCGVEN----YTDWLNSPYFLEKGIPLS   64 (104)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCh---------hHHHHHHHHHh----cCcCcCCCC----hhhhhccccccCCCcCcc
Confidence            556665442  34456677775433         24679999999    999999999    99997532   2369999


Q ss_pred             CcCCCCCCCC
Q 025283          161 CCRPPFECGY  170 (255)
Q Consensus       161 CC~~~~~C~~  170 (255)
                      ||++...|+.
T Consensus        65 CC~~~~~C~~   74 (104)
T cd03161          65 CCKNRSDCSP   74 (104)
T ss_pred             cccCCCCCCc
Confidence            9976556754

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=99.48  E-value=7e-15  Score=109.01  Aligned_cols=92  Identities=10%  Similarity=0.243  Sum_probs=59.9

Q ss_pred             eEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC---CCCCCCC
Q 025283           86 IITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK---LTPIEAG  160 (255)
Q Consensus        86 ~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~---~~~vP~S  160 (255)
                      +++++++..  ..+.+.++.|..++         ..+.+||.+|+    +|+|||+++    |+||....   ...||.|
T Consensus         2 v~r~~v~~~i~~~l~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~vP~S   64 (99)
T cd03166           2 VFRDKVMSEFNDSFNQMISNYNKTN---------DFRKILDRMQK----DLKCCGANN----YTDWENIPSLDTDSVPDS   64 (99)
T ss_pred             CchHHHHHHHHHHHHHHHHHcCCCH---------HHHHHHHHHHH----HhcccCCCC----hhhhhcccCCCCCCCCcC
Confidence            456665442  23456677775421         25789999999    999999999    99997531   2469999


Q ss_pred             CcCCC-CCCCCCccCCcccccCCCCCCCCcccccccCCCceeeeeCcchHHHHHHHHHHhH
Q 025283          161 CCRPP-FECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEW  220 (255)
Q Consensus       161 CC~~~-~~C~~~~~~~~~~~~~~~g~~~~~~c~~~~~~~~~~C~~~~gC~~~~~~~l~~~~  220 (255)
                      ||... ..|+....+...|                    ++||+      +++.+|+++++
T Consensus        65 CC~~~~~~C~~~~~~~~~y--------------------~~GC~------~~~~~~~~~~~   99 (99)
T cd03166          65 CCINVTKGCGINFDEKVIH--------------------LEGCV------TKIEGWLKKNI   99 (99)
T ss_pred             ccCcCCCCcccCCCccchH--------------------HhcCH------HHHHHHHHHhC
Confidence            99643 3565321111112                    22266      99999999874

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=99.46  E-value=1.1e-14  Score=111.25  Aligned_cols=67  Identities=9%  Similarity=0.238  Sum_probs=46.7

Q ss_pred             heeEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC------CC
Q 025283           84 AFIITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK------LT  155 (255)
Q Consensus        84 ~~~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~------~~  155 (255)
                      +|+++++++..  ..+.+.+++|+.++..      ...+.+||.+|+    +|+|||+++    |+||....      ..
T Consensus         1 ~~v~r~~v~~~i~~~l~~~i~~y~~~~~~------~~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~   66 (117)
T cd03160           1 IYFQRDKLKQEMGDIVEKVIQNYGGNPEN------KTAEEAWDYVQF----QLQCCGWTG----PQDWTDNSLIKNSSEP   66 (117)
T ss_pred             CceeHHHHHHHHHHHHHHHHHhcCCCCCC------chHHHHHHHHHh----hCcccCCCC----chhHHhchhccCCCCC
Confidence            36777776552  3456667777543111      035789999999    999999999    99997431      13


Q ss_pred             CCCCCCcCC
Q 025283          156 PIEAGCCRP  164 (255)
Q Consensus       156 ~vP~SCC~~  164 (255)
                      .||.|||.+
T Consensus        67 ~vP~SCC~~   75 (117)
T cd03160          67 LYPCSCCNS   75 (117)
T ss_pred             CCCHhhhcC
Confidence            699999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=99.45  E-value=1.3e-14  Score=111.58  Aligned_cols=63  Identities=10%  Similarity=0.128  Sum_probs=44.4

Q ss_pred             eeEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC---------
Q 025283           85 FIITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK---------  153 (255)
Q Consensus        85 ~~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~---------  153 (255)
                      |+++++++..  ..+.+.+++|+.++         ..+.+||.+|+    +|+|||+++    |+||....         
T Consensus         1 ~v~r~~v~~~i~~~l~~~i~~y~~~~---------~~~~~~D~iQ~----~l~CCG~~~----~~DW~~~~~~~~~~~~~   63 (121)
T cd03159           1 FVFKDWIKDQLTEFLNNNIRAYRDDI---------DLQNLIDFLQE----YWQCCGARG----PDDWNLNIYFNCTDSNP   63 (121)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhccCH---------HHHHHHHHHHH----hccCCCCCC----hHHhcccccccccCCCC
Confidence            3566665542  34566777775322         25789999999    999999999    99996321         


Q ss_pred             ---CCCCCCCCcCC
Q 025283          154 ---LTPIEAGCCRP  164 (255)
Q Consensus       154 ---~~~vP~SCC~~  164 (255)
                         ...||.|||..
T Consensus        64 ~~~~~~vP~SCC~~   77 (121)
T cd03159          64 SRERCGVPFSCCVK   77 (121)
T ss_pred             CCCCCCCCcccccC
Confidence               12499999963

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=99.44  E-value=2.9e-14  Score=107.66  Aligned_cols=70  Identities=11%  Similarity=0.238  Sum_probs=46.5

Q ss_pred             eeEecCCCcc--cccchhhhh-cccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC--------
Q 025283           85 FIITNNGSGH--SVAGLRYKE-YQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK--------  153 (255)
Q Consensus        85 ~~~~~~~~~~--~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~--------  153 (255)
                      |+++++++..  ..+.+.+++ |+.++..       ..+.+||.+|+    +|+|||+++    |+||....        
T Consensus         1 ~v~~~~~~~~i~~~l~~~i~~~y~~~~~~-------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~   65 (110)
T cd03155           1 YTYYQQLEDELKESLKRTMQENYGQSGEE-------ALTLTVDELQQ----EFKCCGSNN----YTDWQDSEWINSNEAN   65 (110)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHcCCCCcH-------HHHHHHHHHHH----hCcCcCCCC----hhhhhhccccccCCCC
Confidence            3456665542  244566666 4432211       35789999999    999999999    99997531        


Q ss_pred             CCCCCCCCcCCC-CCCC
Q 025283          154 LTPIEAGCCRPP-FECG  169 (255)
Q Consensus       154 ~~~vP~SCC~~~-~~C~  169 (255)
                      ...||.|||+.. ..|+
T Consensus        66 ~~~vP~SCC~~~~~~c~   82 (110)
T cd03155          66 GRLVPDSCCKTVVDRCG   82 (110)
T ss_pred             CCCCCccccCCCCCCcc
Confidence            236999999753 2454

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=99.42  E-value=2.3e-14  Score=105.87  Aligned_cols=69  Identities=10%  Similarity=0.310  Sum_probs=47.0

Q ss_pred             eEecCCCc--ccccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhC-CCCCCCCCCc
Q 025283           86 IITNNGSG--HSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSA-KLTPIEAGCC  162 (255)
Q Consensus        86 ~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~-~~~~vP~SCC  162 (255)
                      +++++++.  ...+.+++++|+.++.+       ..+.+||.+|+    +|+|||+++    |+||... ....||.|||
T Consensus         2 v~r~~~~~~i~~~l~~~~~~y~~~~~~-------~~~~~~d~~Q~----~l~CCG~~~----~~Dw~~~~~~~~vP~SCC   66 (98)
T cd03165           2 VFREKVDLTAKDDLKEGLELYGTRNNR-------GLTNAWDITQT----EFRCCGVTN----YTDWYEVLGENRVPDSCC   66 (98)
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCCcH-------HHHHHHHHHHH----hCcCcCCCC----hhHHHHhcCCCCCCHhhc
Confidence            45555543  12456667777543221       25789999999    999999999    9999753 1246999999


Q ss_pred             CC-CCCCC
Q 025283          163 RP-PFECG  169 (255)
Q Consensus       163 ~~-~~~C~  169 (255)
                      .+ +..|+
T Consensus        67 ~~~~~~C~   74 (98)
T cd03165          67 QEDSQDCG   74 (98)
T ss_pred             CCCccccc
Confidence            64 23564

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=99.42  E-value=3.1e-14  Score=102.82  Aligned_cols=83  Identities=13%  Similarity=0.417  Sum_probs=58.3

Q ss_pred             eEecCCCc--ccccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCCCCCCCCCCcC
Q 025283           86 IITNNGSG--HSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCR  163 (255)
Q Consensus        86 ~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~~~~vP~SCC~  163 (255)
                      +++++++.  ...+.+++++|..++         ..+.+||.+|+    +|+|||+++    |+||.    ..+|+|||.
T Consensus         2 v~~~~v~~~i~~~~~~~~~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~----~~vP~SCC~   60 (86)
T cd03164           2 VYEKKLNNYVKEGLTDSLEQYHKDN---------NTSEAWDMIQS----NLQCCGING----TTDWG----SGVPSSCCS   60 (86)
T ss_pred             CchHHHHHHHHHHHHHHHHHhcCCc---------cHHHHHHHHHH----HhcCCCCCC----hhhhC----CCCChhhcC
Confidence            45665543  234456677775322         24789999999    999999999    99995    359999995


Q ss_pred             CCCCCCCCccCCcccccCCCCCCCCcccccccCCCceeeeeCcchHHHHHHHHHHhHHHHH
Q 025283          164 PPFECGYPVVNASYYDLSFHPTSSNKDCKLYKNSRAVKCYNCDSCKAGVAQYMKIEWRVVA  224 (255)
Q Consensus       164 ~~~~C~~~~~~~~~~~~~~~g~~~~~~c~~~~~~~~~~C~~~~gC~~~~~~~l~~~~~~v~  224 (255)
                      .  .|       ..|.   +|                 |.      +++.+++++++.+++
T Consensus        61 ~--~~-------~~~~---~G-----------------C~------~~~~~~~~~~~~iig   86 (86)
T cd03164          61 S--DT-------EYKV---EG-----------------CY------KKLKNWFESNFLYTG   86 (86)
T ss_pred             C--CC-------cccc---cc-----------------HH------HHHHHHHHHHHHHhC
Confidence            3  12       1122   14                 66      999999999988763

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=99.42  E-value=3.3e-14  Score=109.05  Aligned_cols=63  Identities=11%  Similarity=0.139  Sum_probs=44.2

Q ss_pred             eeEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC---------
Q 025283           85 FIITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK---------  153 (255)
Q Consensus        85 ~~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~---------  153 (255)
                      |+++++++..  ..+.+.+++|..+.         ..+.+||.+|+    +|+|||+++    |+||....         
T Consensus         1 ~v~r~~v~~~i~~~l~~~i~~y~~~~---------~~~~~~d~lQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~   63 (119)
T cd03158           1 FIFSNQTIDLLEENIRKAIVHYYDDL---------DLQNIIDFVQK----EFKCCGGDD----YRDWSKNMYFNCSSPNP   63 (119)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHccCH---------HHHHHHHHHHH----HccCCCCCC----hhhcccccccccCCCCC
Confidence            3456665542  34566677765321         36789999999    999999999    99996321         


Q ss_pred             -CCCCCCCCcCC
Q 025283          154 -LTPIEAGCCRP  164 (255)
Q Consensus       154 -~~~vP~SCC~~  164 (255)
                       ...||.|||++
T Consensus        64 ~~~~vP~SCC~~   75 (119)
T cd03158          64 EACGVPYSCCIR   75 (119)
T ss_pred             cCCCcCcCcccC
Confidence             12599999974

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=99.41  E-value=2.8e-14  Score=108.15  Aligned_cols=65  Identities=15%  Similarity=0.386  Sum_probs=45.5

Q ss_pred             heeEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhC---------
Q 025283           84 AFIITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSA---------  152 (255)
Q Consensus        84 ~~~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~---------  152 (255)
                      +++++++++..  ..+.+.+++|..++.        ..+.+||.+|+    +|+|||+++    |+||...         
T Consensus         2 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~   65 (114)
T cd03156           2 ALFFKKDLEDSFKNLLKNNYGNYNSTGD--------AITSTWNRVMI----ELKCCGVNG----PTDFVDSTSFFRQKNE   65 (114)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhccccch--------HHHHHHHHHHh----cccCcCCCC----cHHHHhhhHHhccCCC
Confidence            45666665542  234555666643211        25889999999    999999999    9999653         


Q ss_pred             CCCCCCCCCcCC
Q 025283          153 KLTPIEAGCCRP  164 (255)
Q Consensus       153 ~~~~vP~SCC~~  164 (255)
                      ....||.|||++
T Consensus        66 ~~~~vP~SCC~~   77 (114)
T cd03156          66 PNSPYPESCCKR   77 (114)
T ss_pred             CCCcCCHHHcCc
Confidence            235799999974

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=99.38  E-value=8.3e-14  Score=107.04  Aligned_cols=61  Identities=13%  Similarity=0.174  Sum_probs=41.5

Q ss_pred             EecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC----------C
Q 025283           87 ITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK----------L  154 (255)
Q Consensus        87 ~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~----------~  154 (255)
                      ++++++..  ..+.+.+++|..++         ..+.+||.+|+    +|+|||+++    |+||....          .
T Consensus         3 ~r~~v~~~i~~~l~~~i~~y~~~~---------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~~~~~~~~~~~~~~   65 (120)
T cd03167           3 LWGPLQDGLEHTLRLAIAHYQDDP---------DLRFLIDQVQL----GLQCCGASS----YQDWQQNLYFNCSSPGVQA   65 (120)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCh---------hHHHHHHHHHH----hccCCCCCC----hHHhcccccccCCCCCCCC
Confidence            44444431  23456677665322         24579999999    999999999    99996421          1


Q ss_pred             CCCCCCCcCC
Q 025283          155 TPIEAGCCRP  164 (255)
Q Consensus       155 ~~vP~SCC~~  164 (255)
                      ..||.|||++
T Consensus        66 ~~vP~SCC~~   75 (120)
T cd03167          66 CSLPASCCID   75 (120)
T ss_pred             CCCCcCccCC
Confidence            2599999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

>cd03157 TM4SF12_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family

Probab=99.35  E-value=7.2e-13  Score=98.98  Aligned_cols=59  Identities=14%  Similarity=0.360  Sum_probs=43.1

Q ss_pred             ccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCC-CCCCCCCCcCCC-CCCC
Q 025283           96 VAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAK-LTPIEAGCCRPP-FECG  169 (255)
Q Consensus        96 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~-~~~vP~SCC~~~-~~C~  169 (255)
                      .+.+.|.+|+.++..       ..+.+||.+|+    +|+|||+++    |+||.... ...||.|||.+. ..|+
T Consensus        15 ~l~~~~~~Y~~~~~~-------~~~~~~D~iQ~----~l~CCG~~~----~~DW~~~~~~~~vP~SCC~~~~~~C~   75 (103)
T cd03157          15 SLKSRMSNFGLQRYQ-------WLTHAWNSFQT----EFKCCGVIY----FTDWLEMTEMEWPPDSCCSNQYPGCA   75 (103)
T ss_pred             HHHHHHHHHCCCCch-------hHHHHHHHHHH----hccCccCCC----hhHHhccCCCCCCCccccCCCCCCcC
Confidence            456677778654221       25779999999    999999999    99997532 234999999753 3575

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=99.29  E-value=5.9e-13  Score=104.70  Aligned_cols=74  Identities=15%  Similarity=0.184  Sum_probs=48.6

Q ss_pred             eEecCCCc--ccccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhC-----------
Q 025283           86 IITNNGSG--HSVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSA-----------  152 (255)
Q Consensus        86 ~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~-----------  152 (255)
                      +++++++.  ...+.+.++.|+.++.+.    +...+..||.+|+    +|+|||+++    |+||...           
T Consensus         2 v~rd~l~~~L~~~L~~~i~~Y~~~~~~~----~~~~~~~~D~lQ~----~fkCCG~~~----y~DW~~~~w~~n~y~~~~   69 (143)
T cd03162           2 IMRGSLEESLKTGLKNAMKFYKDTDTPG----RCFLKKTIDMLQI----EFQCCGNNG----YRDWFEIQWISNRYLDFS   69 (143)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhcCCcccc----hhhHHHHHHHHHH----hccCCCCCC----hhhhhhhhhhcccccCCC
Confidence            45555543  234566777776443210    0025779999999    999999999    9999531           


Q ss_pred             ----------------CCCCCCCCCcCC--CCCCCCC
Q 025283          153 ----------------KLTPIEAGCCRP--PFECGYP  171 (255)
Q Consensus       153 ----------------~~~~vP~SCC~~--~~~C~~~  171 (255)
                                      ....||.|||.+  |..|...
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~vP~SCc~~~~~~~C~~~  106 (143)
T cd03162          70 SKEVKDRIKSNVDGRYLTDGVPFSCCNPSSPRPCIQH  106 (143)
T ss_pred             ccchhhhhhcccccccccCCcCCcccCCCCCCchhhh
Confidence                            124799999975  4567643

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03127 tetraspanin_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL)

Probab=99.23  E-value=1.9e-12  Score=93.51  Aligned_cols=50  Identities=18%  Similarity=0.434  Sum_probs=38.0

Q ss_pred             cchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCCCCCCCCCCcCC
Q 025283           97 AGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCCRP  164 (255)
Q Consensus        97 ~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~~~~vP~SCC~~  164 (255)
                      +.+.+++|..++         ..+.+||.+|.    +|+|||++|    |+||.... ..+|.|||..
T Consensus        15 ~~~~~~~~~~~~---------~~~~~~d~iq~----~l~CCG~~~----~~D~~~~~-~~vP~SCc~~   64 (90)
T cd03127          15 LNDAWDEYYVDD---------DFQEAMDALQS----TFECCGVNG----PTDYLDLR-LLVPSSCCKG   64 (90)
T ss_pred             HHHHHHHhcCCc---------hHHHHHHHHHH----hCcCcCCCC----hHHHccCC-CCCCHhhcCC
Confidence            455566654331         25789999999    999999999    99997532 4699999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integr

>cd03152 CD9_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD9 family

Probab=99.07  E-value=1.8e-11  Score=87.96  Aligned_cols=56  Identities=16%  Similarity=0.164  Sum_probs=39.4

Q ss_pred             eeEecCCCcc--cccchhhhhcccc-cchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCCCCCCCCCC
Q 025283           85 FIITNNGSGH--SVAGLRYKEYQLK-DYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGC  161 (255)
Q Consensus        85 ~~~~~~~~~~--~~~~~~~~~y~~~-~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~~~~vP~SC  161 (255)
                      |+++++++..  ..+.+.+++|..+ +.        ..+.+||.+|+    +|+|||+++    |.||      .+|+||
T Consensus         1 ~v~r~~v~~~i~~~~~~~~~~y~~~~~~--------~~~~~~d~iQ~----~l~CCG~~~----~~D~------~vP~SC   58 (84)
T cd03152           1 FSNKDKVVKEVQTFYRQTYAKYKQSRDP--------PLKETLKAIHF----ALDCCGPTG----GLEQ------FVTDTC   58 (84)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhccCCH--------HHHHHHHHHHH----HHcCCCCCC----Cccc------ccCCCC
Confidence            3456665442  2345667777543 21        13468999999    999999999    9999      399998


Q ss_pred             c
Q 025283          162 C  162 (255)
Q Consensus       162 C  162 (255)
                      +
T Consensus        59 ~   59 (84)
T cd03152          59 P   59 (84)
T ss_pred             C
Confidence            4

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD9 is found in virtually all tissues and is potentially involved in developmental processes. It associates with the tetraspanins CD81 and CD63, as well as with some integrin, and has been shown to be involved in a variety of activation, adhesion, and cell motility functions, as well as cell-cell interactions - such as

>cd03151 CD81_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD81_like subfamily

Probab=98.51  E-value=1.5e-08  Score=72.84  Aligned_cols=59  Identities=17%  Similarity=0.139  Sum_probs=39.8

Q ss_pred             eEecCCCcc--cccchhhhhcccccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCCCCCCCCCCc
Q 025283           86 IITNNGSGH--SVAGLRYKEYQLKDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCC  162 (255)
Q Consensus        86 ~~~~~~~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~~~~vP~SCC  162 (255)
                      ++++++...  ..+.+.+++|..+...       ..+.+||.+|+    .|+|||.+|    |+|+..   ..+|++|.
T Consensus         2 v~r~~v~~~i~~~l~~~~~~y~~~~~~-------~~~~~~d~iQ~----~l~CCG~~~----~~d~~~---~~~~~~C~   62 (84)
T cd03151           2 INKDQIIKEVQNFYDSAYQDAVTDTRS-------KGTAVLKTFHS----TLDCCGKGN----LTALLS---LLSTDLCP   62 (84)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHccCcch-------hHHHHHHHHHH----hcCCCCCCC----CcchHH---HHHhCCCC
Confidence            455554432  2345666676442111       24678999999    999999999    988865   35888984

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD81, also referred to as Target for anti-proliferative antigen-1, TAPA-1, is found in virtually all tissues, may be involved in regulation of cell growth and has been described as a member of the CD19/CD21/Leu-13 signal transduction complex identified on B cells (the B-Cell co-receptor).

>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed

Probab=86.18  E-value=6.1  Score=32.58  Aligned_cols=44  Identities=14%  Similarity=0.180  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHhc-ccCcchhhh-hhhhHHHHHHHHHHHHHHHH
Q 025283            9 QLLAITIIIFGVWMS-THHDNCRRS-LTLPVLGLGALIFIISIIGF   52 (255)
Q Consensus         9 ~l~G~~ll~~Giw~~-~~~~~~~~~-~~~~li~~G~~~~~i~~lG~   52 (255)
                      +++|+.++.+|..-+ ..++++.+. .+...-.+|+.++++|.++.
T Consensus        13 LliG~~f~ligaIGLlRfPD~YtRLHAATKa~TLGv~LILlgv~l~   58 (197)
T PRK12585         13 ILIGGLLSILAAIGVIRLPDVYTRTHAAGISNTFGVSLLLFATVGY   58 (197)
T ss_pred             HHHHHHHHHHHHHHHHhcCcHHHHhhccccchhhhHHHHHHHHHHH
Confidence            588888888888888 655455432 12223445555555554443

>PF14967 FAM70: FAM70 protein

Probab=85.06  E-value=0.58  Score=40.94  Aligned_cols=75  Identities=16%  Similarity=0.319  Sum_probs=40.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhc-ccCcchhhhhhhhHHHHHHHHHHHHHHHHHHHH-hcCc-hHHHHHHHHHHHHHHHHHH
Q 025283            3 IYISNVQLLAITIIIFGVWMS-THHDNCRRSLTLPVLGLGALIFIISIIGFLGAL-KNNT-ILLWIYLIMLCLVLVAILV   79 (255)
Q Consensus         3 l~~~N~~l~G~~ll~~Giw~~-~~~~~~~~~~~~~li~~G~~~~~i~~lG~~ga~-~es~-~lL~~y~~ll~vl~~~ei~   79 (255)
                      .|+..++++++.++.+|+..- .-++ ...-..||-|.+|    +-+|+|.+|+. -||| -||..-++++.+-+++-+.
T Consensus        29 w~~~~lL~vS~~iltvGLaatTRTeN-VtVgGYyPGIILg----FGSFLGIiGi~LvENrRqmLvAaIVFiSfGvVaAFc  103 (327)
T PF14967_consen   29 WFVVSLLVVSLLILTVGLAATTRTEN-VTVGGYYPGIILG----FGSFLGIIGIHLVENRRQMLVAAIVFISFGVVAAFC  103 (327)
T ss_pred             eeeHHHHHHHHHHHHhhhheeeeecc-eEecccccceEEe----ehhHHHHhhhhhhhcCceEEEEEEEEEecchHHHHH
Confidence            345556889999999998877 4432 1111124533222    33667777776 3454 4444444444444444333


Q ss_pred             HHh
Q 025283           80 FTV   82 (255)
Q Consensus        80 ~~i   82 (255)
                      .+|
T Consensus       104 CaI  106 (327)
T PF14967_consen  104 CAI  106 (327)
T ss_pred             HHH
Confidence            333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	99.17

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=99.17  E-value=2.2e-13  Score=97.99  Aligned_cols=61  Identities=13%  Similarity=0.214  Sum_probs=41.1

Q ss_pred             eEecCCCcc--cccchhhhhccc-ccchhhhhhccCCcccchhhhhhhccCCCcCCCccCCcChhhhhhCCCCCCCCCCc
Q 025283           86 IITNNGSGH--SVAGLRYKEYQL-KDYSSWFLNHLNNPENWKRLKSCLVKSEDCNNLSKKYKTLKQFKSAKLTPIEAGCC  162 (255)
Q Consensus        86 ~~~~~~~~~--~~~~~~~~~y~~-~~~~~~~~~~~~~~~~~d~iQ~~~~~~~~CCG~~~~~~~~~Dw~~~~~~~vP~SCC  162 (255)
                      ++++++...  ..+.+++++|.. ++..       +.+.+||.+|+    +|+|||+++    |+||..   ..||.|||
T Consensus         2 v~~~~v~~~l~~~l~~~~~~y~~~~~~~-------~~~~~~d~iQ~----~l~CCG~~~----~~Dw~~---~~vP~ScC   63 (90)
T 1g8q_A            2 VNKDQIAKDVKQFYDQALQQAVVDDDAN-------NAKAVVKTFHE----TLDCCGSST----LTALTT---SVLKNNLC   63 (90)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH----HHTCCSCTT----CGGGHH---HHHHTTCS
T ss_pred             ccHHHHHHHHHHHHHHHHHHhccCCCch-------hHHHHHHHHHH----hhcCCCCCC----hhhhcc---CCCCCCCC
Confidence            455554431  234566666532 1111       13679999999    999999999    999974   24899999


Q ss_pred             CC
Q 025283          163 RP  164 (255)
Q Consensus       163 ~~  164 (255)
                      .+
T Consensus        64 ~~   65 (90)
T 1g8q_A           64 PS   65 (90)
T ss_dssp             CT
T ss_pred             CC
Confidence            53

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d1g8qa_	90	CD81 extracellular domain {Human (Homo sapiens) [T	82.04

>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Tetraspanin
superfamily: Tetraspanin
family: Tetraspanin
domain: CD81 extracellular domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.04  E-value=0.021  Score=38.63  Aligned_cols=18  Identities=22%  Similarity=0.263  Sum_probs=15.7

Q ss_pred             cccchhhhhhhccCCCcCCCcc
Q 025283          120 PENWKRLKSCLVKSEDCNNLSK  141 (255)
Q Consensus       120 ~~~~d~iQ~~~~~~~~CCG~~~  141 (255)
                      ++....+|.    .|+|||..+
T Consensus        32 k~tLk~fH~----~L~CCG~~~   49 (90)
T d1g8qa_          32 KAVVKTFHE----TLDCCGSST   49 (90)
T ss_dssp             HHHHHHHHH----HHTCCSCTT
T ss_pred             HHHHHHHHH----HHccCCCCC
Confidence            446788999    999999999