Citrus Sinensis ID: 025415

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYSANGNKGKEM
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHcccccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHHHHHHccccccccccEEEccEEEEccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHccccccHHHHccccccccccccccEEEHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHEHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
msggvgatskdislpkehevafkqqddptsfqstkstatpskassnflsfRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLfkiafppppqskessvfdpntTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFmegvafsdkfstpirvfvpvfynsrrIFTIVDWLKTEfskaegdnsaSARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYSangnkgkem
Flexible Loop (DISEMBL)
msggvgatskdislpkEHEVAfkqqddptsfqstkstatpskasSNFLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFskaegdnsasARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYsangnkgkem
Low Complexity Region (SEG)
MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQstkstatpskassNFLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFSKAEGDNSASarrlylgralalaNMAFWCFNLFGFLLPVYLPKAFKKYYSANGNKGKEM
Disordered region (IsUnstruct)
**********************************************FLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIA**************PNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFSKA******SARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYS*********
Disordered Region (DISOPRED)
********SK****************************************RQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAF****************TILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYS*********
Disordered Region (DISEMBL)
**********DISLPKEHEVAF*********************SSNFLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFS********SARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYSANGNKGKEM
Disordered Region (DISPRO)
*********KDIS*PKE**************************SSNFLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYSA********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNSRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFKKYYSANGNKGKEM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
224134873	248	predicted protein [Populus trichocarpa]	0.960	0.979	0.718	2e-95
255545242	249	conserved hypothetical protein [Ricinus	0.964	0.979	0.688	4e-93
388499230	248	unknown [Lotus japonicus]	0.964	0.983	0.674	1e-91
356575984	249	PREDICTED: uncharacterized protein LOC10	0.980	0.995	0.646	6e-90
356535859	249	PREDICTED: uncharacterized protein LOC10	0.980	0.995	0.650	2e-89
356561536	251	PREDICTED: uncharacterized protein LOC10	0.980	0.988	0.630	4e-87
357443953	246	hypothetical protein MTR_1g100800 [Medic	0.960	0.987	0.654	8e-85
225464507	256	PREDICTED: uncharacterized protein LOC10	0.992	0.980	0.634	2e-84
449456319	246	PREDICTED: uncharacterized protein LOC10	0.968	0.995	0.626	4e-84
388508198	246	unknown [Medicago truncatula]	0.960	0.987	0.646	4e-83

>gi|224134873|ref|XP_002321926.1| predicted protein [Populus trichocarpa] gi|222868922|gb|EEF06053.1| predicted protein [Populus trichocarpa]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 176/245 (71%), Positives = 199/245 (81%), Gaps = 2/245 (0%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG T  DISLP E E   K Q+D  S ++ KST T  KA   FLSFRQLN LAV+T
Sbjct: 1   MSGGVGPTCNDISLPNEREQEQKLQEDLASLKNPKSTTTSKKA--GFLSFRQLNVLAVMT 58

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAII 120
           VFAASGM+S EDFAFV+FS+IY++F  K+AFP     ++S VFDP   ILR+YV VGAII
Sbjct: 59  VFAASGMVSPEDFAFVVFSIIYLYFFSKVAFPTTNPPRDSVVFDPKNKILRLYVFVGAII 118

Query: 121 GLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNS 180
           GL LPIAYI EGIFEGDKEGIKAAAPHVFLLA+QVFMEGVA SD+FS PIRVFVPVFYNS
Sbjct: 119 GLFLPIAYIFEGIFEGDKEGIKAAAPHVFLLAAQVFMEGVASSDRFSIPIRVFVPVFYNS 178

Query: 181 RRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFK 240
           RRIFT+VDWL+ E SKAE D   S  RL++GRALA+AN+AFWCFNLFGFLLPVY+P+AFK
Sbjct: 179 RRIFTLVDWLRDEISKAEQDYGGSTWRLHIGRALAVANLAFWCFNLFGFLLPVYIPRAFK 238

Query: 241 KYYSA 245
           KYYS 
Sbjct: 239 KYYSG 243

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545242|ref|XP_002513682.1| conserved hypothetical protein [Ricinus communis] gi|223547590|gb|EEF49085.1| conserved hypothetical protein [Ricinus communis]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 170/247 (68%), Positives = 200/247 (80%), Gaps = 3/247 (1%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG T  DISLP+E E   K  +D +S + ++ T+   KA+  FLSF QLNALAV+ 
Sbjct: 1   MSGGVGPTCNDISLPREQEQEHKIHEDISSLRKSQHTSPSKKAA--FLSFTQLNALAVII 58

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAII 120
           V AASGM+S EDFAFV FS+ YM+F+ ++AFP    SKES VFDP   IL +YV VG II
Sbjct: 59  VLAASGMVSPEDFAFVAFSIFYMYFISRVAFPCIDPSKESLVFDPKNKILNIYVFVGGII 118

Query: 121 GLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNS 180
           GL LPIAYI EGIFEGDK+GI+AAAPHVFLLASQVFMEGV+FSD+F+ P+RVFVPVFYNS
Sbjct: 119 GLFLPIAYIFEGIFEGDKDGIRAAAPHVFLLASQVFMEGVSFSDRFAIPVRVFVPVFYNS 178

Query: 181 RRIFTIVDWLKTEFS-KAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAF 239
           RRIFTIV+WL++E S K E ++  SARRL++GR LALANMAFWCFNLFGFLLPVYLPKAF
Sbjct: 179 RRIFTIVEWLRSEMSAKVEEEHRGSARRLHIGRVLALANMAFWCFNLFGFLLPVYLPKAF 238

Query: 240 KKYYSAN 246
           KKYYS +
Sbjct: 239 KKYYSGS 245

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499230|gb|AFK37681.1| unknown [Lotus japonicus]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/252 (67%), Positives = 197/252 (78%), Gaps = 8/252 (3%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKAS--SNFLSFRQLNALAV 58
           MSGGVG T  DISLPKE E+  K+Q D     S KS   P K +  + F SFRQLN LA+
Sbjct: 1   MSGGVGPTGCDISLPKEQEIEHKEQQD-----SNKSLKNPQKPTRKAGFFSFRQLNCLAL 55

Query: 59  VTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGA 118
           V V +ASG++S EDF FV+FS+IYM+F+ KIAFP  P S+E SVF+P   +L +YVL+GA
Sbjct: 56  VIVLSASGLVSVEDFGFVVFSMIYMYFMSKIAFPLHPNSREPSVFNPQNKLLGLYVLIGA 115

Query: 119 IIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFY 178
           IIGL  PIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEG+AFSD FS PIR FVP+ Y
Sbjct: 116 IIGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGIAFSDGFSLPIRAFVPILY 175

Query: 179 NSRRIFTIVDWLKTEFSKAEGD-NSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPK 237
           NS RIFTI++W+KTE  K+  D +S S RR+Y GRALA+ANMAFWCFNLFGFLLPVYLPK
Sbjct: 176 NSTRIFTILEWVKTEIYKSTSDEHSGSYRRMYAGRALAVANMAFWCFNLFGFLLPVYLPK 235

Query: 238 AFKKYYSANGNK 249
           AFK YYS +  K
Sbjct: 236 AFKLYYSVHKEK 247

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575984|ref|XP_003556115.1| PREDICTED: uncharacterized protein LOC100797452 [Glycine max]

 Score =  336 bits (861), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 161/249 (64%), Positives = 195/249 (78%), Gaps = 1/249 (0%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG T  DISLP+E EV  K+Q +  S ++   T T +     FLSFR LN LAVV 
Sbjct: 1   MSGGVGPTGSDISLPQEQEVDHKEQQEQHSLKNLHKTITTTPHKPTFLSFRHLNCLAVVV 60

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPP-PPQSKESSVFDPNTTILRVYVLVGAI 119
           V ++SGM++ EDFAFV+FS+IYM+FL K+AFP   P  +E  VF+P   +L +YV +GAI
Sbjct: 61  VLSSSGMVAPEDFAFVLFSIIYMYFLSKMAFPSLHPSKEEPLVFNPKNKLLALYVFIGAI 120

Query: 120 IGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYN 179
           IGL  PIAYILEGIFEGDKEGIKAAAPHVFLL+SQVFMEGVAFS  FSTP+R FVPVFYN
Sbjct: 121 IGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLSSQVFMEGVAFSGMFSTPMRAFVPVFYN 180

Query: 180 SRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAF 239
           SRRIFTIVDWL++E +K   ++S S RR+++GR LA+ANMAFWCFNLFGFLLPVYLPK F
Sbjct: 181 SRRIFTIVDWLRSEINKVNEEHSGSDRRIFVGRVLAVANMAFWCFNLFGFLLPVYLPKVF 240

Query: 240 KKYYSANGN 248
           + YY+ + +
Sbjct: 241 RLYYAGHKD 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535859|ref|XP_003536460.1| PREDICTED: uncharacterized protein LOC100784533 [Glycine max]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 162/249 (65%), Positives = 194/249 (77%), Gaps = 1/249 (0%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG T  DISLP+E EV  K+  +  S ++   T T +     FLSFR LN LAVV 
Sbjct: 1   MSGGVGPTGSDISLPQEQEVGHKEPQEQHSLKNLHKTITTTPHKPTFLSFRHLNCLAVVV 60

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPP-PQSKESSVFDPNTTILRVYVLVGAI 119
           V +ASGM++ EDFAFV+FS+IYM+FL K+AFP   P  +E  VF+P   +L +YV VGAI
Sbjct: 61  VLSASGMVAPEDFAFVLFSIIYMYFLSKMAFPSLLPSKEEPLVFNPKNKVLALYVFVGAI 120

Query: 120 IGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYN 179
           IGL  PIAYILEGIFEGDKEGIKAAAPHVFLL+SQVFMEGVAFS +FSTP+R FVPVFYN
Sbjct: 121 IGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLSSQVFMEGVAFSGRFSTPMRAFVPVFYN 180

Query: 180 SRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAF 239
           SRRIFTIVDWL++E +K    +S S RR+++GR LA+ANMAFWCFNLFGFLLPVYLPK F
Sbjct: 181 SRRIFTIVDWLRSEINKVNEVHSGSDRRIFVGRVLAVANMAFWCFNLFGFLLPVYLPKVF 240

Query: 240 KKYYSANGN 248
           + YY+ + +
Sbjct: 241 RLYYAGHKD 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561536|ref|XP_003549037.1| PREDICTED: uncharacterized protein LOC100808528 [Glycine max]

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 157/249 (63%), Positives = 193/249 (77%), Gaps = 1/249 (0%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGG+G T  DISLPKE E+ FK+Q D  S ++     TP +    FLSF QLNALAVV 
Sbjct: 1   MSGGIGPTGCDISLPKEQELGFKEQHDQQSLKNLNKPTTP-QDKVGFLSFNQLNALAVVI 59

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAII 120
           V +ASG++S EDFAFV FSLIYM+F+ K+AFP    S++  VF+P   +L++Y L+GA I
Sbjct: 60  VLSASGLVSPEDFAFVFFSLIYMYFIAKVAFPSLQPSRDPQVFNPQNKLLQLYALIGATI 119

Query: 121 GLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNS 180
           GL  PIAYILEG+FEGD+EGIKAAAPHVFLLASQVFMEGVA S +FS PIR F+  FYN+
Sbjct: 120 GLFTPIAYILEGVFEGDQEGIKAAAPHVFLLASQVFMEGVASSQRFSAPIRAFLGAFYNA 179

Query: 181 RRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFK 240
           RRIFTIVDWL++E  K   ++S SA R+++G+ALA+ANMA+WCFNLFGFLLPVYLPK  K
Sbjct: 180 RRIFTIVDWLRSEVYKMNDEHSGSAWRIHVGKALAMANMAYWCFNLFGFLLPVYLPKVLK 239

Query: 241 KYYSANGNK 249
            YYS+  N+
Sbjct: 240 VYYSSEYNE 248

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443953|ref|XP_003592254.1| hypothetical protein MTR_1g100800 [Medicago truncatula] gi|355481302|gb|AES62505.1| hypothetical protein MTR_1g100800 [Medicago truncatula]

 Score =  319 bits (817), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 161/246 (65%), Positives = 191/246 (77%), Gaps = 3/246 (1%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG T  DISLPKE +    +++   S    KST+TP + +S FLSFRQLN LAVV 
Sbjct: 1   MSGGVGPTGCDISLPKEEQEIEHKEEQDKSLN--KSTSTPQRKTS-FLSFRQLNCLAVVV 57

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAII 120
           V +ASGM+S EDF FV+FS+IYM F+ K+AFP  P  ++  +F     IL++YV +GAII
Sbjct: 58  VLSASGMVSPEDFGFVLFSVIYMCFISKVAFPSHPSKEQPPIFTQQIKILKIYVFIGAII 117

Query: 121 GLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNS 180
           GL  PIAYIL GIFEGDKEGIKAA PHVFLLASQVFMEGVAFS+ FS+PIR FVPV YNS
Sbjct: 118 GLYAPIAYILHGIFEGDKEGIKAATPHVFLLASQVFMEGVAFSNGFSSPIRAFVPVIYNS 177

Query: 181 RRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFK 240
           RRIFTIVDWL+ E SK   ++S S +R+Y GRALA+ANMAFWCFNLFGFL+PVYLP+ FK
Sbjct: 178 RRIFTIVDWLRDEISKVGEEHSGSYKRIYAGRALAVANMAFWCFNLFGFLIPVYLPRVFK 237

Query: 241 KYYSAN 246
            YYS+ 
Sbjct: 238 AYYSSQ 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464507|ref|XP_002269597.1| PREDICTED: uncharacterized protein LOC100252463 [Vitis vinifera]

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 163/257 (63%), Positives = 194/257 (75%), Gaps = 6/257 (2%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPT--SFQSTKSTATPSKASSN--FLSFRQLNAL 56
           MSGGVG T  DI LPK+      Q   P   S  + K++  P+ A +   FL+FRQLNAL
Sbjct: 1   MSGGVGPTYNDIQLPKDDHEHDDQDHHPQLISAAAAKNSHHPTIAPTRKGFLTFRQLNAL 60

Query: 57  AVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQ-SKESSVFDPNTTILRVYVL 115
           AV+ VF+ASGM+S EDF FV+FS IY+ F+ K+AFPPPP  S +  VFDPN   L +YV 
Sbjct: 61  AVIIVFSASGMVSIEDFVFVVFSYIYIHFISKVAFPPPPNASTQERVFDPNNKFLSLYVF 120

Query: 116 VGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVP 175
           + AIIGL+LPIAYI  GI E DK+GIKAA+PHVFLL+SQVFMEGVAFSDKFS PI VFVP
Sbjct: 121 IAAIIGLILPIAYIFHGILEEDKQGIKAASPHVFLLSSQVFMEGVAFSDKFSIPISVFVP 180

Query: 176 VFYNSRRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYL 235
           VFYNSRRIFTIV+WL+ E  K + +   SA R+Y+GRALA+ANM  WCFNLFGFLLPVYL
Sbjct: 181 VFYNSRRIFTIVEWLRNEIGKVDEEYGGSAGRVYIGRALAIANMVLWCFNLFGFLLPVYL 240

Query: 236 PKAFKKYYSANGNKGKE 252
           P+AFKKYY A+ NK K+
Sbjct: 241 PRAFKKYY-ASFNKIKD 256

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456319|ref|XP_004145897.1| PREDICTED: uncharacterized protein LOC101214743 [Cucumis sativus] gi|449524036|ref|XP_004169029.1| PREDICTED: uncharacterized protein LOC101230752 [Cucumis sativus]

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 156/249 (62%), Positives = 191/249 (76%), Gaps = 4/249 (1%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG    DISLPKE E   K+  DP   Q   S     + ++ FLS RQLNALAVV 
Sbjct: 1   MSGGVGPICGDISLPKEQESIHKEAWDPK--QGGGSVGR--RKAAAFLSLRQLNALAVVI 56

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAII 120
           +F+ASGM+ AED  FV+FS++YM+FL ++AFP    + +++VF P   +LR+YVL  A++
Sbjct: 57  IFSASGMVCAEDLVFVMFSIMYMYFLSRVAFPRIGGAGDAAVFGPENRVLRLYVLFAAMV 116

Query: 121 GLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNS 180
           GL LP+AYILEG FE DKEGIKAA+PHVFLLASQVFMEGVA +D FSTPIRVFVPVFYNS
Sbjct: 117 GLFLPVAYILEGFFEEDKEGIKAASPHVFLLASQVFMEGVAANDSFSTPIRVFVPVFYNS 176

Query: 181 RRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFK 240
           RRIFT+ +WL+ EF+K + + S S RRL +GRALA+ANMA W FNLFGFLLPVYLP+AFK
Sbjct: 177 RRIFTLTEWLRNEFAKEDKEYSGSVRRLMVGRALAVANMALWSFNLFGFLLPVYLPRAFK 236

Query: 241 KYYSANGNK 249
           +YYS   +K
Sbjct: 237 RYYSLYKSK 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508198|gb|AFK42165.1| unknown [Medicago truncatula]

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 159/246 (64%), Positives = 189/246 (76%), Gaps = 3/246 (1%)

Query: 1   MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQSTKSTATPSKASSNFLSFRQLNALAVVT 60
           MSGGVG T  DISLPKE +    +++   S    KST+TP + +S FLSFRQLN LAVV 
Sbjct: 1   MSGGVGPTGCDISLPKEEQEIEHKEEQDKSLN--KSTSTPQRKTS-FLSFRQLNCLAVVV 57

Query: 61  VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILRVYVLVGAII 120
           V +ASGM+S EDF FV+FS+IYM F+ K+AFP  P  ++  +F     IL++YV +GAII
Sbjct: 58  VLSASGMVSPEDFGFVLFSVIYMCFISKVAFPSHPSKEQPPIFTQQIKILKIYVFIGAII 117

Query: 121 GLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYNS 180
           GL  PIAYIL GIFE DKEGIKAA PHVFLLASQVFMEGVAFS+ FS+PIR FVPV YNS
Sbjct: 118 GLYAPIAYILHGIFESDKEGIKAATPHVFLLASQVFMEGVAFSNGFSSPIRAFVPVIYNS 177

Query: 181 RRIFTIVDWLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYLPKAFK 240
           RRIFTIVDWL+ E SK   ++S   +R+Y GRALA+ANMAFWCFNLFGFL+PVYLP+ FK
Sbjct: 178 RRIFTIVDWLRDEISKVGEEHSGFYKRIYAGRALAVANMAFWCFNLFGFLIPVYLPRVFK 237

Query: 241 KYYSAN 246
            YYS+ 
Sbjct: 238 AYYSSQ 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
TAIR|locus:2156702	242	AT5G52420 "AT5G52420" [Arabido	0.940	0.983	0.461	7.5e-57
TAIR|locus:2172878	229	AT5G23920 "AT5G23920" [Arabido	0.774	0.855	0.42	6.1e-39
TAIR|locus:2010419	271	AT1G27990 "AT1G27990" [Arabido	0.758	0.708	0.352	3.1e-28

TAIR|locus:2156702 AT5G52420 "AT5G52420" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 114/247 (46%), Positives = 151/247 (61%)

Query:     1 MSGGVGATSKDISLPKEHEVAFKQQDDPTSFQXXXXXXXXXXXXXNFLSFRQLNALAVVT 60
             MSGGVG T  DI+LPKE E   + Q   T                 F SFRQLN LA++ 
Sbjct:     1 MSGGVGPTYNDITLPKEEEEEHQTQSTST--------VSSTGKPAGFFSFRQLNILAIII 52

Query:    61 VFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTT-ILRVYVLVGAI 119
             V +ASG+++ +DF F I +LIY FFL K+ FPP       +    +T  I R+YV    I
Sbjct:    53 VLSASGLVTIQDFIFTILTLIYFFFLSKLIFPPHNNPNRDAPLTSSTNKIFRIYVTAAGI 112

Query:   120 IGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTPIRVFVPVFYN 179
             +GL++PI YI EGI E DK G+ AAAPHVFLLASQ+FMEG+A    FS P R+ VP+ YN
Sbjct:   113 VGLIIPICYIFEGIVEDDKNGVSAAAPHVFLLASQIFMEGLATMFGFSAPARILVPIVYN 172

Query:   180 SRRIFTIVDWLKTEFSKAEGDNSASXXXXXXXXXXXXXNMAFWCFNLFGFLLPVYLPKAF 239
             +RR+ T+V+W+ +EFS+ +   + S             N+  W FNLFG L+PVYLP+AF
Sbjct:   173 ARRVLTLVEWIMSEFSREDVTGTVSARRMYAGKVLAAANLGIWSFNLFGVLIPVYLPRAF 232

Query:   240 KKYYSAN 246
             K+YY ++
Sbjct:   233 KRYYGSD 239

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2172878 AT5G23920 "AT5G23920" [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 84/200 (42%), Positives = 119/200 (59%)

Query:    51 RQLNALAVVTVFAASGMISAEDFAFVIFSLIYMF-FLFKIAFPPPPQSKESSVFDPNTTI 109
             RQL  L+ + + AA G++   + AFVI   IY++ FL + AFP     ++  + +P   +
Sbjct:    31 RQLVFLSFMILLAAKGLVGIGEIAFVILCYIYLYEFLSRFAFPRKQTEQKKRLSNPKNKL 90

Query:   110 LRVYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFSDKFSTP 169
              + Y L  AIIGLL P+ YI +GI+ GD  G  AAAPH+FLL+ Q F E + FSDK+S P
Sbjct:    91 FQAYFLATAIIGLLFPLCYIGDGIYRGDIHGAGAAAPHLFLLSGQAFTEPIGFSDKYSMP 150

Query:   170 IRVFVPVFYNSRRIFTIVDWLKTEFSKAEGDNSASXXXXXXXXXXXXXNMAFWCFNLFGF 229
             I +  PVFYN+RRIF ++DW+K EFS  +                   N   W +NLFG 
Sbjct:   151 IGILGPVFYNARRIFALLDWVKAEFSDTQ--RPGGPLRLYGGRVIASVNTVMWFYNLFGL 208

Query:   230 LLPVYLPKAFKKYYSANGNK 249
             LLPV+LP++ + Y+S + NK
Sbjct:   209 LLPVFLPRSCEIYFSGD-NK 227

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2010419 AT1G27990 "AT1G27990" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 69/196 (35%), Positives = 106/196 (54%)

Query:    52 QLNALAVVTVFAASGMISAEDFAFVIFSLIYMFFLFKIAFPPPPQSKESSVFDPNTTILR 111
             +L  +A + VF+ASG++   D  F  F+ IY+  L ++AFP    S  S      + + R
Sbjct:    47 ELQLVAFILVFSASGLVPILDMLFPAFASIYIIALSRLAFPSHGVSTASPEVFRGSKLFR 106

Query:   112 VYVLVGAIIGLLLPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGVAFS-DKFSTPI 170
             +YV+ G  IGL LP+AY+L G   GD   +++A PH+FLL+ Q+  E V      FS P+
Sbjct:   107 LYVISGTTIGLFLPLAYVLGGFARGDDHAVRSATPHLFLLSCQILTENVISGLSLFSPPV 166

Query:   171 RVFVPVFYNSRRIFTIVDWLKTE-FSKAEGDNSASXXXXXX--XXXXXXXNMAFWCFNLF 227
             R  VP+ Y   RIF I+ W K   F+K+   N+                 N+ ++  NL 
Sbjct:   167 RALVPLLYTVWRIFVIIGWSKDVWFNKSLPINATPNVVTWFWFGRYLALANLGYFGVNLL 226

Query:   228 GFLLPVYLPKAFKKYY 243
              FL+P +LP+AF++Y+
Sbjct:   227 CFLIPRFLPRAFEQYF 242


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.140   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      253       227   0.00079  113 3  11 22  0.47    32
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  159 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.43u 0.11s 18.54t   Elapsed:  00:00:01
  Total cpu time:  18.43u 0.11s 18.54t   Elapsed:  00:00:01
  Start:  Fri May 10 08:07:36 2013   End:  Fri May 10 08:07:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
KOG0873	283	consensus C-4 sterol methyl oxidase [Lipid transpo	89.13

>KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism]

Probab=89.13  E-value=0.24  Score=46.62  Aligned_cols=57  Identities=18%  Similarity=0.311  Sum_probs=43.4

Q ss_pred             HHHHHHhhccCCCCccceeeehhhHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHhh
Q 025415          189 WLKTEFSKAEGDNSASARRLYLGRALALANMAFWCFNLFGFLLPVYL-PKAFKKYYSA  245 (253)
Q Consensus       189 W~~~e~~k~~~~~~~~~~~~~fGR~LAvANl~yw~~NLFgFLiPvfL-PRAf~~Yy~~  245 (253)
                      ++.+-|.+-....+++.+..+.+-...+++++||++||..++|=+.. |+.|+||==.
T Consensus        10 flq~~W~~l~~~f~~d~~l~~~~~~~~~~~~~y~l~~lpf~~iD~t~~~~~~~rYKIQ   67 (283)
T KOG0873|consen   10 FLQPLWDYLYNTFSGDFLLLCVGGPFIVHELVYWLFCLPFIFIDVTNRPPFLRRYKIQ   67 (283)
T ss_pred             HHHHHHHHHHhhCCCceEEEeechhHHHHHHHHHHhcchheEeecccCcchhhhhccC
Confidence            44444443333333677778888889999999999999999999998 9999998433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00