Citrus Sinensis ID: 025550
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 251 | 2.2.26 [Sep-21-2011] | |||||||
| P0CL94 | 238 | Acyl-protein thioesterase | yes | no | 0.796 | 0.840 | 0.372 | 5e-35 | |
| P0CL95 | 238 | Acyl-protein thioesterase | N/A | no | 0.796 | 0.840 | 0.372 | 5e-35 | |
| Q6CGL4 | 227 | Acyl-protein thioesterase | yes | no | 0.800 | 0.885 | 0.333 | 4e-30 | |
| Q6CJK6 | 228 | Acyl-protein thioesterase | yes | no | 0.812 | 0.894 | 0.344 | 4e-27 | |
| Q6FW75 | 230 | Acyl-protein thioesterase | yes | no | 0.828 | 0.904 | 0.352 | 3e-26 | |
| Q12354 | 227 | Acyl-protein thioesterase | yes | no | 0.820 | 0.907 | 0.348 | 7e-26 | |
| O95372 | 231 | Acyl-protein thioesterase | yes | no | 0.784 | 0.852 | 0.338 | 5e-25 | |
| Q9WTL7 | 231 | Acyl-protein thioesterase | yes | no | 0.784 | 0.852 | 0.338 | 5e-25 | |
| Q4PID3 | 240 | Acyl-protein thioesterase | N/A | no | 0.800 | 0.837 | 0.339 | 6e-25 | |
| O42881 | 224 | Acyl-protein thioesterase | yes | no | 0.792 | 0.888 | 0.323 | 6e-25 |
| >sp|P0CL94|APTH1_CRYNJ Acyl-protein thioesterase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNF02430 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 115/215 (53%), Gaps = 15/215 (6%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI-HEIP 100
+++LHGLGDSG P+ + S F KW P AP PV+ N+G MPSWFDI H
Sbjct: 20 VIFLHGLGDSGHGWLPVAKMLWS-SFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDK 78
Query: 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG 160
+ S DE +L+ +++V +I EV +GI N + + GFSQGGA+++ ++L RKL
Sbjct: 79 LDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVLNMLTTKRKLA 138
Query: 161 GGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ------- 213
G S WVP N ++ + AK P+ W HG D V + GQ FL Q
Sbjct: 139 GVVALSTWVPLNHKIVQMMSEHAKDIPVFWGHGTNDPVVDYRFGQRSVDFLVQKCGYKLL 198
Query: 214 ------AGISCEFKAYPGLGHSISNEELRNLESWI 242
A F++YPG+ HS +E+ +L+SW+
Sbjct: 199 SQGTTFARPGIRFESYPGMPHSSCPQEIEDLKSWL 233
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: - |
| >sp|P0CL95|APTH1_CRYNB Acyl-protein thioesterase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CNBF2260 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 115/215 (53%), Gaps = 15/215 (6%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI-HEIP 100
+++LHGLGDSG P+ + S F KW P AP PV+ N+G MPSWFDI H
Sbjct: 20 VIFLHGLGDSGHGWLPVAKMLWS-SFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDK 78
Query: 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG 160
+ S DE +L+ +++V +I EV +GI N + + GFSQGGA+++ ++L RKL
Sbjct: 79 LDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVLNMLTTKRKLA 138
Query: 161 GGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ------- 213
G S WVP N ++ + AK P+ W HG D V + GQ FL Q
Sbjct: 139 GVVALSTWVPLNHKIVQMMSEHAKDIPVFWGHGTNDPVVDYRFGQRSVDFLVQKCGYKLL 198
Query: 214 ------AGISCEFKAYPGLGHSISNEELRNLESWI 242
A F++YPG+ HS +E+ +L+SW+
Sbjct: 199 SQGTTFARPGIRFESYPGMPHSSCPQEIEDLKSWL 233
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Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q6CGL4|APTH1_YARLI Acyl-protein thioesterase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0A18337g PE=3 SV=1 | Back alignment and function description |
|---|
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 12/213 (5%)
Query: 42 ILWLHGLGDSGP-----ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI 96
+++LHGLGDSG A E K + K+ FP AP PV+ N+G MPSW+DI
Sbjct: 19 VIFLHGLGDSGAGWMFLAEEARK----AQRLNHVKFIFPEAPQQPVSLNFGMRMPSWYDI 74
Query: 97 HEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP 156
E+ ++ +D+ +L++V + ++I +E AG+ N + + GFSQG A++LA+ L
Sbjct: 75 KEL-ANVNAAQDQEGILESVGRLESLIKEETDAGVPANRIVIGGFSQGCAVSLATGCLTQ 133
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFL--EQA 214
KLGG SG+VP ++ Q + + TP+ +HG AD+ + F+ G+ F+ E
Sbjct: 134 TKLGGIVGLSGYVPIKDYILSQHNTTNQDTPMFLAHGTADQVIRFDYGKLSRDFIINELK 193
Query: 215 GISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247
+ ++ Y GL HS EE+ ++ +W++ +
Sbjct: 194 FKNVDWHQYEGLTHSCGFEEISDILNWLEENIK 226
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q6CJK6|APTH1_KLULA Acyl-protein thioesterase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0F17908g PE=3 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 38 ARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI 96
A+N IL HGLGDSG + + L SP F T++ FP+APN + N G MP+WF+I
Sbjct: 15 AKNVILVFHGLGDSGSGWSFLAEYLQRSPAFAHTRFVFPNAPNMRIDANGGMSMPAWFNI 74
Query: 97 HEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP 156
++ + D + +++ +++ I +++ GI P N+ + GFSQG ALTLAS + P
Sbjct: 75 YDW-ANPDARVDVEGIKSSLKVINSFIQEQIDDGISPENIILGGFSQGAALTLASTVTSP 133
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAG 215
KLGG SG+ +D + K TP+ HG D + + G F E+
Sbjct: 134 YKLGGFFALSGFCRLKKEDLDSIAENKNKDTPVFHGHGDQDPIIPIQYGSDAKKFFEKYF 193
Query: 216 --ISCEFKAYPGLGHSISNEELRNLESWI 242
+FK+Y G+ HS S EE+++L ++
Sbjct: 194 HLSDYDFKSYRGMAHSTSLEEMQDLVQFL 222
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q6FW75|APTH1_CANGA Acyl-protein thioesterase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0D02398g PE=3 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFD 95
A+ +++LHGLGD+G + P F+ T + FP+AP PVT N G MPSWFD
Sbjct: 14 AKYALIFLHGLGDTGQGWSFLAQYLQQYHPCFESTNFIFPNAPIKPVTANGGMPMPSWFD 73
Query: 96 IHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155
I T S+ D ++++ V +D ++ GI+P N+ V GFSQG AL LAS +
Sbjct: 74 IKVWDWTTSN-VDTVGFQQSLKEVQKYVDSSISDGIEPQNIIVGGFSQGAALALASAVTL 132
Query: 156 PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG 215
K+G SG+ L + + TP+ HG +D V F G F + AG
Sbjct: 133 NNKIGAFIGLSGFAYLRNELQETRKNLNPNTPVFHGHGESDDVVPFPIGVQTAEFFKSAG 192
Query: 216 --ISCEFKAYPGLGHSISNEELRNLESWIKTRM 246
+ FK+Y GLGHS EL +L ++K+ +
Sbjct: 193 ELENYTFKSYRGLGHSADPAELNDLAEFLKSNV 225
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q12354|APTH1_YEAST Acyl-protein thioesterase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR118C PE=1 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 107/218 (49%), Gaps = 12/218 (5%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPE---FKLTKWSFPSAPNNPVTCNYGAVMPSWF 94
AR I++LHGLGD+G + + F+ T + FP+AP VT N GA+MP+WF
Sbjct: 13 ARQTIIFLHGLGDTGSGWGFLAQYLQQRDPAAFQHTNFVFPNAPELHVTANGGALMPAWF 72
Query: 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154
DI E + S D + ++ ++ + +E+ GI P + + GFSQG AL LA+ +
Sbjct: 73 DILEWDPSFSKV-DSDGFMNSLNSIEKTVKQEIDKGIKPEQIIIGGFSQGAALALATSVT 131
Query: 155 YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214
P K+GG SG+ L KTPI HG D V G F +
Sbjct: 132 LPWKIGGIVALSGFCSIPGILKQHKNGINVKTPIFHGHGDMDPVVPIGLGIKAKQFYQD- 190
Query: 215 GISC-----EFKAYPGLGHSISNEELRNLESWIKTRMS 247
SC EFK Y G+ HS +EL +L S+IK +S
Sbjct: 191 --SCEIQNYEFKVYKGMAHSTVPDELEDLASFIKKSLS 226
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Mediates the deacylation of G-alpha proteins such as GPA1 in vivo, but has weak or no activity toward palmitoylated Ras proteins. Has weak lysophospholipase activity in vitro; however such activity may not exist in vivo. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|O95372|LYPA2_HUMAN Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+++LHGLGD+G + + P K+ P AP PVT N VMPSWFD+ + +
Sbjct: 27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGL 81
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ +P+DE+ + KA N+ A+I+ E+ GI N + + GFSQGGAL+L + L P L G
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAG 141
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI--SCE 219
S W+P + + AK IL HG D V G L +
Sbjct: 142 IVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQ 201
Query: 220 FKAYPGLGHSISNEELRNLESWIK 243
FK YPG+ HS +E+ ++ +++
Sbjct: 202 FKTYPGVMHSSCPQEMAAVKEFLE 225
|
May hydrolyze fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has lysophospholipase activity. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q9WTL7|LYPA2_MOUSE Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+++LHGLGD+G + + P K+ P AP PVT N VMPSWFD+ + +
Sbjct: 27 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGL 81
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ +P+DE+ + KA N+ A+I+ E+ GI N + + GFSQGGAL+L + L P L G
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAG 141
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI--SCE 219
S W+P + + AK IL HG D V G L +
Sbjct: 142 IVALSCWLPLHRNFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQ 201
Query: 220 FKAYPGLGHSISNEELRNLESWIK 243
FK YPG+ HS +E+ ++ +++
Sbjct: 202 FKTYPGVMHSSCPQEMAAVKEFLE 225
|
May hydrolyze fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS (By similarity). Has lysophospholipase activity. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q4PID3|APTH1_USTMA Acyl-protein thioesterase 1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UM00130 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 107/215 (49%), Gaps = 14/215 (6%)
Query: 42 ILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP 100
+ +LHGLGDS ++ + L P ++ P+AP PVT N G MPSWFDI +
Sbjct: 21 LFFLHGLGDSSAGWSDVAQMLSQRPSLSHVRFVLPNAPIQPVTLNMGMPMPSWFDILALD 80
Query: 101 VTASSPKDESSLLKAVRNVHAMIDKE---VAAGID-----PNNVFVCGFSQGGALTLASV 152
S +DE+ LLK+ + +I E A +D + V GFSQGGA++L +
Sbjct: 81 -DLSGAEDEAGLLKSTDEIKKLIKAENDGTAKDLDGHKIPSERIVVGGFSQGGAISLLTG 139
Query: 153 LLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLE 212
L P + G A S W+P A + T +K + +HG AD V +E GQ FL+
Sbjct: 140 LTNPTPVAGVAALSTWLPLRAKIATLRTPTSKTLKVFQAHGDADPVVKYEYGQRTVDFLK 199
Query: 213 QA----GISCEFKAYPGLGHSISNEELRNLESWIK 243
EF YP + HS EE+R+L ++++
Sbjct: 200 NELALNDKDVEFHTYPRMPHSACPEEIRDLAAFLE 234
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|O42881|APTH1_SCHPO Acyl-protein thioesterase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC8E11.04c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 5/204 (2%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+++LHGLGDSG + +++ FK KW FP+AP+ PVT N G MP+W+DI+
Sbjct: 20 VIFLHGLGDSGQGWSFMANTWSN--FKHIKWIFPNAPSIPVTVNNGMKMPAWYDIYSF-- 75
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+DE+ +L++ +H +ID E+A GI + + + GFSQG ++L + L YP++L G
Sbjct: 76 ADMKREDENGILRSAGQLHELIDAELALGIPSDRILIGGFSQGCMVSLYAGLTYPKRLAG 135
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFL-EQAGISCEF 220
SG++P + + AK+ PIL ++ D V A +L + C
Sbjct: 136 IMGHSGFLPLASKFPSALSRVAKEIPILLTYMTEDPIVPSVLSSASAKYLINNLQLKCLD 195
Query: 221 KAYPGLGHSISNEELRNLESWIKT 244
+ + G HS+S+E + + +T
Sbjct: 196 RPFEGDAHSLSSESFMAMYKFTQT 219
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 251 | ||||||
| 359496970 | 253 | PREDICTED: acyl-protein thioesterase 1-l | 0.980 | 0.972 | 0.785 | 1e-112 | |
| 296086977 | 486 | unnamed protein product [Vitis vinifera] | 0.980 | 0.506 | 0.785 | 1e-112 | |
| 224116058 | 264 | predicted protein [Populus trichocarpa] | 0.980 | 0.931 | 0.75 | 1e-106 | |
| 449434010 | 258 | PREDICTED: acyl-protein thioesterase 1-l | 0.988 | 0.961 | 0.767 | 1e-104 | |
| 388523059 | 252 | unknown [Lotus japonicus] | 0.996 | 0.992 | 0.777 | 1e-104 | |
| 449479503 | 258 | PREDICTED: acyl-protein thioesterase 1-l | 0.988 | 0.961 | 0.763 | 1e-104 | |
| 334186804 | 262 | carboxylesterase [Arabidopsis thaliana] | 0.972 | 0.931 | 0.724 | 1e-101 | |
| 357480429 | 215 | Acyl-protein thioesterase [Medicago trun | 0.848 | 0.990 | 0.798 | 1e-101 | |
| 255554733 | 250 | acyl-protein thioesterase 1,2, putative | 0.972 | 0.976 | 0.738 | 1e-101 | |
| 359806503 | 253 | uncharacterized protein LOC100818152 [Gl | 0.972 | 0.964 | 0.725 | 5e-99 |
| >gi|359496970|ref|XP_003635387.1| PREDICTED: acyl-protein thioesterase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/247 (78%), Positives = 219/247 (88%), Gaps = 1/247 (0%)
Query: 4 TKPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFT 63
TKPI L T+ L TI FIL P + +S + + MAR+F+LWLHGLGDSGPANEPIKTLFT
Sbjct: 8 TKPIALLTITLGSTIFFILILRPHT-FSPKPDSMARSFVLWLHGLGDSGPANEPIKTLFT 66
Query: 64 SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMI 123
SPEF+ T W FPSAP+NPVTCNYG+VMPSWFDIHEIPVTA SPKDE+ +LKAV+NVHAMI
Sbjct: 67 SPEFRNTIWKFPSAPSNPVTCNYGSVMPSWFDIHEIPVTADSPKDENGVLKAVQNVHAMI 126
Query: 124 DKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDA 183
DKE+AAG +P N+FVCGFSQGGALTLASVLLYPR LGGGA+FSGWVPFN+++I++ +DA
Sbjct: 127 DKELAAGTNPKNIFVCGFSQGGALTLASVLLYPRTLGGGAVFSGWVPFNSTMIERMPADA 186
Query: 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243
KKTPILWSHGMADRTVLFEAGQAGPPFLEQAG+SCEFKAYPGL HSISNEELR LESWIK
Sbjct: 187 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGVSCEFKAYPGLAHSISNEELRYLESWIK 246
Query: 244 TRMSCSS 250
TR+ SS
Sbjct: 247 TRLQSSS 253
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086977|emb|CBI33233.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/247 (78%), Positives = 219/247 (88%), Gaps = 1/247 (0%)
Query: 4 TKPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFT 63
TKPI L T+ L TI FIL P + +S + + MAR+F+LWLHGLGDSGPANEPIKTLFT
Sbjct: 241 TKPIALLTITLGSTIFFILILRPHT-FSPKPDSMARSFVLWLHGLGDSGPANEPIKTLFT 299
Query: 64 SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMI 123
SPEF+ T W FPSAP+NPVTCNYG+VMPSWFDIHEIPVTA SPKDE+ +LKAV+NVHAMI
Sbjct: 300 SPEFRNTIWKFPSAPSNPVTCNYGSVMPSWFDIHEIPVTADSPKDENGVLKAVQNVHAMI 359
Query: 124 DKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDA 183
DKE+AAG +P N+FVCGFSQGGALTLASVLLYPR LGGGA+FSGWVPFN+++I++ +DA
Sbjct: 360 DKELAAGTNPKNIFVCGFSQGGALTLASVLLYPRTLGGGAVFSGWVPFNSTMIERMPADA 419
Query: 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243
KKTPILWSHGMADRTVLFEAGQAGPPFLEQAG+SCEFKAYPGL HSISNEELR LESWIK
Sbjct: 420 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGVSCEFKAYPGLAHSISNEELRYLESWIK 479
Query: 244 TRMSCSS 250
TR+ SS
Sbjct: 480 TRLQSSS 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116058|ref|XP_002317196.1| predicted protein [Populus trichocarpa] gi|222860261|gb|EEE97808.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/252 (75%), Positives = 216/252 (85%), Gaps = 6/252 (2%)
Query: 5 KPIVLFTV-ILSGTIIFILFFW-----PSSSYSHEQNPMARNFILWLHGLGDSGPANEPI 58
+PI +F++ +L T IFI + PSSS + AR+F+LWLHGLGDSGPANEPI
Sbjct: 13 RPIAIFSLTLLLSTAIFIASVFLQSKNPSSSQKQQSMAAARSFVLWLHGLGDSGPANEPI 72
Query: 59 KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118
KTLFTSPEF+ TKWSFPSAP PV+CNYGA MPSWFDIHEIPVTA SPKDESSLLKAV++
Sbjct: 73 KTLFTSPEFRTTKWSFPSAPIAPVSCNYGAKMPSWFDIHEIPVTADSPKDESSLLKAVQH 132
Query: 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ 178
VHAMIDKE+AAG +P NVFVCGFSQGGALTL+S+LLYP+ LGGGA+FSGWVPFN+S+++Q
Sbjct: 133 VHAMIDKEIAAGTNPENVFVCGFSQGGALTLSSILLYPKTLGGGAVFSGWVPFNSSIMEQ 192
Query: 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNL 238
+ DAK+TPILW HGMAD TVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN EL+ L
Sbjct: 193 VSPDAKRTPILWLHGMADATVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNAELKYL 252
Query: 239 ESWIKTRMSCSS 250
ESWIKTR+ SS
Sbjct: 253 ESWIKTRLPSSS 264
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434010|ref|XP_004134789.1| PREDICTED: acyl-protein thioesterase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/249 (76%), Positives = 215/249 (86%), Gaps = 1/249 (0%)
Query: 3 LTKPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMA-RNFILWLHGLGDSGPANEPIKTL 61
LT I L L+ TI+F+LF P SS S +PMA R FILWLHGLGDSGPANEPIK+L
Sbjct: 10 LTNSITLSVATLAATILFVLFHSPHSSSSTTPHPMAARTFILWLHGLGDSGPANEPIKSL 69
Query: 62 FTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121
FTSPEFK T WSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA SPK ESS+L+AV++VHA
Sbjct: 70 FTSPEFKRTSWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTADSPKAESSVLEAVQSVHA 129
Query: 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTS 181
IDK V GI PNN+FVCGFSQGGALTLASVLLYP+ LGGGA+FSGWVPFN+++ID+
Sbjct: 130 KIDKVVDGGITPNNIFVCGFSQGGALTLASVLLYPKTLGGGAVFSGWVPFNSTIIDRIHP 189
Query: 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESW 241
DAK+TPILWSHG+ DRTVLFEAGQAGPPFLE+AG+SCEFKAYPGLGHSIS EEL++LESW
Sbjct: 190 DAKRTPILWSHGIDDRTVLFEAGQAGPPFLEKAGLSCEFKAYPGLGHSISMEELKHLESW 249
Query: 242 IKTRMSCSS 250
IK+R+ SS
Sbjct: 250 IKSRLQSSS 258
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388523059|gb|AFK49591.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/252 (77%), Positives = 220/252 (87%), Gaps = 2/252 (0%)
Query: 1 MLLTKPIVLFTVILSGTIIFILFF--WPSSSYSHEQNPMARNFILWLHGLGDSGPANEPI 58
M + KPI+LFT+ LS ++ +L F PSSS S M+R+FILWLHGLGDSGPANEPI
Sbjct: 1 MKIIKPIILFTITLSSALLILLLFPNNPSSSSSSVSMSMSRSFILWLHGLGDSGPANEPI 60
Query: 59 KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118
KTLFTSPEF+ TKWSFPSAPN PVTCNYG+VMPSWFDI EIPVTA SPKDESSLLKAVRN
Sbjct: 61 KTLFTSPEFRTTKWSFPSAPNAPVTCNYGSVMPSWFDIQEIPVTADSPKDESSLLKAVRN 120
Query: 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ 178
VHA ID+E+AAGI+PNN+F+CGFSQGGALTLASVLLYP+ LGGGA+FSGWVPFN+S I+Q
Sbjct: 121 VHATIDEEIAAGINPNNIFICGFSQGGALTLASVLLYPKTLGGGAVFSGWVPFNSSNIEQ 180
Query: 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNL 238
T +AK+TPILWSHG+ADRTVLFEAGQAGPPFLE+ G+ CEFKAYPGLGHSISNEELR L
Sbjct: 181 ITPEAKRTPILWSHGLADRTVLFEAGQAGPPFLEKIGVGCEFKAYPGLGHSISNEELRYL 240
Query: 239 ESWIKTRMSCSS 250
ESWIK R SS
Sbjct: 241 ESWIKARFQSSS 252
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449479503|ref|XP_004155617.1| PREDICTED: acyl-protein thioesterase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/249 (76%), Positives = 215/249 (86%), Gaps = 1/249 (0%)
Query: 3 LTKPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMA-RNFILWLHGLGDSGPANEPIKTL 61
LT I L L+ TI+F+L P SS S +PMA R FILWLHGLGDSGPANEPIK+L
Sbjct: 10 LTNSITLSVATLAATILFVLLHSPHSSSSTTPHPMAARTFILWLHGLGDSGPANEPIKSL 69
Query: 62 FTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121
FTSPEFK T WSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA SPK ESS+L+AV++VHA
Sbjct: 70 FTSPEFKRTSWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTADSPKAESSVLEAVQSVHA 129
Query: 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTS 181
IDK V GI+PNN+FVCGFSQGGALTLASVLLYP+ LGGGA+FSGWVPFN+++ID+
Sbjct: 130 KIDKVVDGGINPNNIFVCGFSQGGALTLASVLLYPKTLGGGAVFSGWVPFNSTIIDRIHP 189
Query: 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESW 241
DAK+TPILWSHG+ DRTVLFEAGQAGPPFLE+AG+SCEFKAYPGLGHSIS EEL++LESW
Sbjct: 190 DAKRTPILWSHGIDDRTVLFEAGQAGPPFLEKAGLSCEFKAYPGLGHSISMEELKHLESW 249
Query: 242 IKTRMSCSS 250
IK+R+ SS
Sbjct: 250 IKSRLQSSS 258
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334186804|ref|NP_193961.3| carboxylesterase [Arabidopsis thaliana] gi|26450211|dbj|BAC42224.1| unknown protein [Arabidopsis thaliana] gi|332659189|gb|AEE84589.1| carboxylesterase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/250 (72%), Positives = 212/250 (84%), Gaps = 6/250 (2%)
Query: 3 LTKPIVLFTVILSGTIIFILFFW------PSSSYSHEQNPMARNFILWLHGLGDSGPANE 56
L KPIVL T+ L ++ F FF+ S+S ++ MAR FILWLHGLGDSGPANE
Sbjct: 6 LKKPIVLLTIALLSSVFFFAFFFLNKSDVSSTSALRNRDSMARTFILWLHGLGDSGPANE 65
Query: 57 PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116
PIKTLF S EF+ TKW FPSAP NPV+CNYGAVMPSWFDI E+P+TA SPKDESSLLKAV
Sbjct: 66 PIKTLFRSQEFRNTKWLFPSAPPNPVSCNYGAVMPSWFDIPELPLTAGSPKDESSLLKAV 125
Query: 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI 176
+NVHA+IDKE+A GI+P NV++CGFSQGGALTLASVLLYP+ +GGGA+FSGW+PFN+S+
Sbjct: 126 KNVHAIIDKEIAGGINPENVYICGFSQGGALTLASVLLYPKTIGGGAVFSGWIPFNSSIT 185
Query: 177 DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELR 236
+QFT DAKKTPILWSHG+ D+TVLFEAGQA PFL+QAG++CEFKAYPGLGHSISNEEL+
Sbjct: 186 NQFTEDAKKTPILWSHGIDDKTVLFEAGQAALPFLQQAGVTCEFKAYPGLGHSISNEELQ 245
Query: 237 NLESWIKTRM 246
LESW+K RM
Sbjct: 246 YLESWLKQRM 255
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357480429|ref|XP_003610500.1| Acyl-protein thioesterase [Medicago truncatula] gi|355511555|gb|AES92697.1| Acyl-protein thioesterase [Medicago truncatula] gi|388512561|gb|AFK44342.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 170/213 (79%), Positives = 198/213 (92%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
AR+F+LWLHGLGDSGPANEPIKTLFTSP+F+ TKW FPSAP+ PVTCNYG+VMPSWFDIH
Sbjct: 3 ARSFVLWLHGLGDSGPANEPIKTLFTSPQFRSTKWFFPSAPHAPVTCNYGSVMPSWFDIH 62
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157
EIPVTA+SP DESSLLKAV+NVHA IDKE+AAG +PNN+F+CGFSQGGALTLASVLLYP+
Sbjct: 63 EIPVTANSPNDESSLLKAVQNVHATIDKEIAAGTNPNNIFICGFSQGGALTLASVLLYPK 122
Query: 158 KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217
LGGGA+FSGWVPFN+S+I+Q T +AK+TPILWSHG++D+TVLFEAGQA PPFLE+ G+S
Sbjct: 123 TLGGGAVFSGWVPFNSSVIEQITPEAKRTPILWSHGLSDKTVLFEAGQAAPPFLEKIGVS 182
Query: 218 CEFKAYPGLGHSISNEELRNLESWIKTRMSCSS 250
CEFKAYPGL HSI+NEEL++LESWIK R+ SS
Sbjct: 183 CEFKAYPGLAHSINNEELKHLESWIKARLQSSS 215
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554733|ref|XP_002518404.1| acyl-protein thioesterase 1,2, putative [Ricinus communis] gi|223542249|gb|EEF43791.1| acyl-protein thioesterase 1,2, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/249 (73%), Positives = 214/249 (85%), Gaps = 5/249 (2%)
Query: 4 TKPIVLFTVILSGTIIFILFF--WPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTL 61
TKPI L + T++ I FF P+ S S N MA +FILWLHGLGDSGPANEPIK+L
Sbjct: 5 TKPIAL---LFCTTLLIITFFHRTPTPSPSPTPNSMAPSFILWLHGLGDSGPANEPIKSL 61
Query: 62 FTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121
F S F TKWSFP+APNNPV+CNYGAVMPSWFDI+EIP+TA SPKDE+ +LKAV+NVH
Sbjct: 62 FASSHFSSTKWSFPNAPNNPVSCNYGAVMPSWFDIYEIPITADSPKDETGILKAVQNVHG 121
Query: 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTS 181
+IDKE+AAG +P+NVFVCGFSQGGALTLASV+LYP+ LGGGA+FSGWVPFN+S+++Q +
Sbjct: 122 IIDKEIAAGTNPDNVFVCGFSQGGALTLASVMLYPKTLGGGAVFSGWVPFNSSIMEQISP 181
Query: 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESW 241
DAK+TPILWSHG+ADRTVLFEAGQAGPPFLE+AGISCEFKAYPGLGHSISN EL+ LESW
Sbjct: 182 DAKRTPILWSHGIADRTVLFEAGQAGPPFLEKAGISCEFKAYPGLGHSISNGELQYLESW 241
Query: 242 IKTRMSCSS 250
IKTR+ SS
Sbjct: 242 IKTRLRTSS 250
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359806503|ref|NP_001241511.1| uncharacterized protein LOC100818152 [Glycine max] gi|255639669|gb|ACU20128.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 177/244 (72%), Positives = 207/244 (84%)
Query: 7 IVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPE 66
++ T+ LS I+ +L F + S AR+F+LWLHGLGDSGPANEPIKTLFTS +
Sbjct: 9 VLTITITLSSAILLLLLFPQNQKPSSSSMSRARSFVLWLHGLGDSGPANEPIKTLFTSSQ 68
Query: 67 FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKE 126
F+ TKWSFPSAP+ PVTCNYG+VMPSWFDI EIPV A SP DESSLLKAVRNVHA IDKE
Sbjct: 69 FRDTKWSFPSAPSAPVTCNYGSVMPSWFDILEIPVAADSPNDESSLLKAVRNVHATIDKE 128
Query: 127 VAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKT 186
+AAGI+PNN+F+CGFSQGGALTLASVLLYP+ LGGGA+FSGWVPFN+S+I+Q T +AK+T
Sbjct: 129 IAAGINPNNIFICGFSQGGALTLASVLLYPKTLGGGAVFSGWVPFNSSIIEQITPEAKQT 188
Query: 187 PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246
PILWSHG+ DRTV+FEAGQAGPPFLE+ G+ CEFKAYPGLGH+I+NEEL LESWIK R+
Sbjct: 189 PILWSHGLVDRTVMFEAGQAGPPFLEKIGVGCEFKAYPGLGHTINNEELLYLESWIKARL 248
Query: 247 SCSS 250
SS
Sbjct: 249 QSSS 252
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 251 | ||||||
| TIGR_CMR|CPS_4278 | 229 | CPS_4278 "putative carboxylest | 0.840 | 0.921 | 0.341 | 6.2e-30 | |
| FB|FBgn0042138 | 216 | CG18815 [Drosophila melanogast | 0.772 | 0.898 | 0.361 | 5e-28 | |
| UNIPROTKB|Q8EFH3 | 221 | SO_1999 "Phospholipase/carboxy | 0.800 | 0.909 | 0.333 | 5e-28 | |
| TIGR_CMR|SO_1999 | 221 | SO_1999 "phospholipase/carboxy | 0.800 | 0.909 | 0.333 | 5e-28 | |
| ZFIN|ZDB-GENE-050417-87 | 230 | lypla1 "lysophospholipase I" [ | 0.796 | 0.869 | 0.367 | 1.7e-27 | |
| UNIPROTKB|G4NIW9 | 244 | MGG_02811 "Acyl-protein thioes | 0.804 | 0.827 | 0.346 | 2.8e-27 | |
| ZFIN|ZDB-GENE-040426-1715 | 232 | lypla2 "lysophospholipase II" | 0.792 | 0.857 | 0.354 | 1.9e-26 | |
| WB|WBGene00010564 | 223 | ath-1 [Caenorhabditis elegans | 0.796 | 0.896 | 0.338 | 3.2e-26 | |
| UNIPROTKB|I3LHP2 | 281 | LYPLA2 "Uncharacterized protei | 0.784 | 0.701 | 0.338 | 5.2e-26 | |
| SGD|S000004108 | 227 | YLR118C "Acyl-protein thioeste | 0.832 | 0.920 | 0.348 | 5.2e-26 |
| TIGR_CMR|CPS_4278 CPS_4278 "putative carboxylesterase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 73/214 (34%), Positives = 117/214 (54%)
Query: 33 EQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92
E A + ++WLHGLGDSG PI +F+ PE ++ FP AP VT N G VM S
Sbjct: 12 EPETPATSCVIWLHGLGDSGAGFAPIVPIFSLPENHGIRFIFPHAPEQAVTINQGYVMRS 71
Query: 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASV 152
W+DI + + + D +L + + V A+I +++ +GI N+ + GFSQGG L+L +
Sbjct: 72 WYDIKSLDL--HNRADMDGVLASEKKVQALIQEQIDSGIAAKNIVLAGFSQGGVLSLFTG 129
Query: 153 LLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLE 212
L + + L G S ++P + +L + S TPIL +HG D V AG+ L
Sbjct: 130 LRFGQSLAGILALSCYLPTSDTLPELCHSANAATPILQNHGERDDVVPMSAGKMANTLLT 189
Query: 213 QAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246
A +K+Y + HS+ ++LR++ +W++ R+
Sbjct: 190 AADYDVTWKSY-AMDHSVLPDQLRDISAWLQARL 222
|
|
| FB|FBgn0042138 CG18815 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 73/202 (36%), Positives = 106/202 (52%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
++++HGLGD+G P K+ P+AP PV+ N G MPSWFD+ + +
Sbjct: 17 LIFMHGLGDTGHGWSSALAAIRPPFMKVI---CPTAPTQPVSLNAGFRMPSWFDLKTLDI 73
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
P+DE + A +VH MI KE++AGI N + + GFSQGGAL L S L Y + L G
Sbjct: 74 --GGPEDEPGIQSARDSVHGMIQKEISAGIPANRIVLGGFSQGGALALYSALTYDQPLAG 131
Query: 162 GAIFSGWVPFNASLID-QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF 220
S W+P + + SD PI +HG D V ++ GQ L+ + F
Sbjct: 132 VVALSCWLPLHKQFPGAKVNSD--DVPIFQAHGDYDPVVPYKFGQLSASLLKSFMKNVTF 189
Query: 221 KAYPGLGHSISNEELRNLESWI 242
K Y GL HS S++E+ +++ I
Sbjct: 190 KTYSGLSHSSSDDEMDDVKDII 211
|
|
| UNIPROTKB|Q8EFH3 SO_1999 "Phospholipase/carboxylesterase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 68/204 (33%), Positives = 107/204 (52%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
++WLHGLGDSG P+ P ++ FP AP VT N G +M +W+DI + +
Sbjct: 18 VIWLHGLGDSGAGFAPVVPALGLPADHSIRFIFPHAPEQAVTINGGYIMRAWYDIKSMDL 77
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ D ++ + +V A+ID+++AAGI + + GFSQGG ++L + L YP KL G
Sbjct: 78 HDRA--DMQGVMASELSVQALIDEQIAAGIPSERIVLAGFSQGGVMSLFTGLRYPHKLAG 135
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFK 221
S ++P L Q ++ TPIL HG D V AG L G +++
Sbjct: 136 IMALSCYLPTADVLPSQLSAANTNTPILLQHGEQDDVVPLSAGLLAKEALISGGYQVQWQ 195
Query: 222 AYPGLGHSISNEELRNLESWIKTR 245
YP + HS+ +L+ + +W++ R
Sbjct: 196 TYP-MPHSVIPVQLKAISTWLQQR 218
|
|
| TIGR_CMR|SO_1999 SO_1999 "phospholipase/carboxylesterase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 68/204 (33%), Positives = 107/204 (52%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
++WLHGLGDSG P+ P ++ FP AP VT N G +M +W+DI + +
Sbjct: 18 VIWLHGLGDSGAGFAPVVPALGLPADHSIRFIFPHAPEQAVTINGGYIMRAWYDIKSMDL 77
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ D ++ + +V A+ID+++AAGI + + GFSQGG ++L + L YP KL G
Sbjct: 78 HDRA--DMQGVMASELSVQALIDEQIAAGIPSERIVLAGFSQGGVMSLFTGLRYPHKLAG 135
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFK 221
S ++P L Q ++ TPIL HG D V AG L G +++
Sbjct: 136 IMALSCYLPTADVLPSQLSAANTNTPILLQHGEQDDVVPLSAGLLAKEALISGGYQVQWQ 195
Query: 222 AYPGLGHSISNEELRNLESWIKTR 245
YP + HS+ +L+ + +W++ R
Sbjct: 196 TYP-MPHSVIPVQLKAISTWLQQR 218
|
|
| ZFIN|ZDB-GENE-050417-87 lypla1 "lysophospholipase I" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+++LHGLGD+G +P K+ P AP PVT N MPSWFDI I +
Sbjct: 24 VIFLHGLGDTGHGWAQAMAGIRTPH---VKYICPHAPVMPVTLNMNMAMPSWFDI--ISL 78
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
++ +DES + +A NV A+ID+EV GI + + + GFSQGGAL+L + L +KLGG
Sbjct: 79 NPNAQEDESGIKRAAENVKALIDQEVKNGIPSHRIVLGGFSQGGALSLFTALTTHQKLGG 138
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCE 219
S W+P SL S K +L HG AD V GQ L+ +
Sbjct: 139 VIALSCWLPLRNSLSKSVISKNKDISVLQCHGEADPLVPLIFGQLTVEKLKSMLKPSNVT 198
Query: 220 FKAYPGLGHSISNEELRNLESWIKTRM 246
FK Y G+ HS EE+ +++ +I+ ++
Sbjct: 199 FKTYSGMTHSACPEEMMDIKQFIEKQL 225
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| UNIPROTKB|G4NIW9 MGG_02811 "Acyl-protein thioesterase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 72/208 (34%), Positives = 104/208 (50%)
Query: 42 ILWLHGLGDSGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP 100
++++HGLGDSG P ++ + K+ P AP PVTCN G MP W+DI I
Sbjct: 20 VIFIHGLGDSGHGWAPAVENWRRRQKLDEVKFILPHAPTIPVTCNMGMRMPGWYDIKSID 79
Query: 101 VTASS---PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157
T S +DE +L + + H +I +E+ AGI + + GFSQGG +++ S L
Sbjct: 80 GTPESLRKDEDEEGILLSQKYFHELIQQEIDAGIPSERIVLGGFSQGGVMSIFSGLTAKV 139
Query: 158 KLGGGAIFSGWVPFNASLIDQFTS-DAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAG 215
KL S +VP + + S +A K TPI HG D V G L+ G
Sbjct: 140 KLAAIVAMSAYVPLSLKFKELVASCEANKATPIWMGHGTTDLVVPTVLGMMSEALLKDEG 199
Query: 216 ISCEFKAYPGLGHSISNEELRNLESWIK 243
K YPG+GHS EEL +E++++
Sbjct: 200 YQVSMKLYPGMGHSACPEELDEVEAFLR 227
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| ZFIN|ZDB-GENE-040426-1715 lypla2 "lysophospholipase II" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 74/209 (35%), Positives = 112/209 (53%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+++LHGLGD+G T P K + P AP PVT N MPSWFD+ + +
Sbjct: 27 VIFLHGLGDTGHGWADAMTSIRLPYIK---YICPHAPRIPVTLNLKMTMPSWFDL--MGL 81
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ SP+DE+ + +A N+ A+ID EV GI N + + GFSQGGAL+L + L ++L G
Sbjct: 82 SPESPEDEAGIKRAAENIKAIIDHEVKNGIPSNRIVLGGFSQGGALSLYTALTSQQQLAG 141
Query: 162 GAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE- 219
S W+P + + + A K TPIL HG D + + G L+ +S E
Sbjct: 142 VVGLSCWLPLHKTFPQAAGASANKDTPILQCHGEMDPMIPVQFGAMTAEKLKTI-VSPEN 200
Query: 220 --FKAYPGLGHSISNEELRNLESWIKTRM 246
F+ YPGL HS +E+ ++ +I+ ++
Sbjct: 201 ITFRTYPGLMHSSCPQEMSAVKDFIEKQL 229
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| WB|WBGene00010564 ath-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 70/207 (33%), Positives = 108/207 (52%)
Query: 42 ILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP 100
+++LHGLGD G + KT + K+ P + PVT N G MP+WFD+ +
Sbjct: 22 LIFLHGLGDQGHGWADAFKT---EAKHDNIKFICPHSSERPVTLNMGMRMPAWFDLFGLD 78
Query: 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG 160
A +DE + +A + VH +ID EVAAGI + + V GFS GGAL + + L YP+KLG
Sbjct: 79 PNAQ--EDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLG 136
Query: 161 GGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF 220
G S + FT++ TPI HG D V + GQ ++++ E
Sbjct: 137 GIVGLSSFFLQRTKFPGSFTAN-NATPIFLGHGTDDFLVPLQFGQMSEQYIKKFNPKVEL 195
Query: 221 KAYPGLGHSISNEELRNLESWIKTRMS 247
Y G+ HS EE+R++++++ ++
Sbjct: 196 HTYRGMQHSSCGEEMRDVKTFLSAHIA 222
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| UNIPROTKB|I3LHP2 LYPLA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 69/204 (33%), Positives = 104/204 (50%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+++LHGLGD+G + + P K+ P AP PVT N VMPSWFD+ + +
Sbjct: 77 VIFLHGLGDTGHSWADALSTIRLPH---VKYICPHAPRIPVTLNMKMVMPSWFDL--MGL 131
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ +P+DE+ + KA N+ A+I+ E+ GI N + + GFSQGGAL+L + L P L G
Sbjct: 132 SPDAPEDEAGIKKAAENIKALIEHEIKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAG 191
Query: 162 GAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC--E 219
S W+P + + AK IL HG D V G L +
Sbjct: 192 IVALSCWLPLHRAFPQAANGSAKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQ 251
Query: 220 FKAYPGLGHSISNEELRNLESWIK 243
FK YPG+ HS +E+ ++ +++
Sbjct: 252 FKTYPGVMHSSCPQEMAAVKEFLE 275
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| SGD|S000004108 YLR118C "Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 75/215 (34%), Positives = 108/215 (50%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPE---FKLTKWSFPSAPNNPVTCNYGAVMPSWF 94
AR I++LHGLGD+G + + F+ T + FP+AP VT N GA+MP+WF
Sbjct: 13 ARQTIIFLHGLGDTGSGWGFLAQYLQQRDPAAFQHTNFVFPNAPELHVTANGGALMPAWF 72
Query: 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154
DI E + S D + ++ ++ + +E+ GI P + + GFSQG AL LA+ +
Sbjct: 73 DILEWDPSFSKV-DSDGFMNSLNSIEKTVKQEIDKGIKPEQIIIGGFSQGAALALATSVT 131
Query: 155 YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214
P K+GG SG+ L KTPI HG D V G F + +
Sbjct: 132 LPWKIGGIVALSGFCSIPGILKQHKNGINVKTPIFHGHGDMDPVVPIGLGIKAKQFYQDS 191
Query: 215 -GI-SCEFKAYPGLGHSISNEELRNLESWIKTRMS 247
I + EFK Y G+ HS +EL +L S+IK +S
Sbjct: 192 CEIQNYEFKVYKGMAHSTVPDELEDLASFIKKSLS 226
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6BSS8 | APTH1_DEBHA | 3, ., 1, ., 2, ., - | 0.3317 | 0.8127 | 0.8793 | yes | no |
| Q6CGL4 | APTH1_YARLI | 3, ., 1, ., 2, ., - | 0.3333 | 0.8007 | 0.8854 | yes | no |
| Q6FW75 | APTH1_CANGA | 3, ., 1, ., 2, ., - | 0.3521 | 0.8286 | 0.9043 | yes | no |
| Q4I8Q4 | APTH1_GIBZE | 3, ., 1, ., 2, ., - | 0.3080 | 0.8167 | 0.8723 | yes | no |
| Q12354 | APTH1_YEAST | 3, ., 1, ., 2, ., - | 0.3486 | 0.8207 | 0.9074 | yes | no |
| Q750X7 | APTH1_ASHGO | 3, ., 1, ., 2, ., - | 0.3211 | 0.8326 | 0.8893 | yes | no |
| Q6CJK6 | APTH1_KLULA | 3, ., 1, ., 2, ., - | 0.3444 | 0.8127 | 0.8947 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.2 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | fgenesh4_pm.C_LG_XI000039 | hypothetical protein (264 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.40.286.1 | phospholipase A1 (EC-3.1.1.32) (357 aa) | • | 0.899 | |||||||
 | fgenesh4_pg.C_LG_II001255 | phospholipase A1 (EC-3.1.1.32) (367 aa) | • | 0.899 | |||||||
 | eugene3.00820009 | SubName- Full=Putative uncharacterized protein; (399 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 251 | |||
| pfam02230 | 213 | pfam02230, Abhydrolase_2, Phospholipase/Carboxyles | 1e-49 | |
| COG0400 | 207 | COG0400, COG0400, Predicted esterase [General func | 3e-31 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 5e-08 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 2e-07 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 9e-07 | |
| COG3509 | 312 | COG3509, LpqC, Poly(3-hydroxybutyrate) depolymeras | 1e-05 | |
| COG0412 | 236 | COG0412, COG0412, Dienelactone hydrolase and relat | 1e-05 | |
| TIGR01840 | 212 | TIGR01840, esterase_phb, esterase, PHB depolymeras | 2e-05 | |
| COG0657 | 312 | COG0657, Aes, Esterase/lipase [Lipid metabolism] | 6e-05 | |
| pfam00326 | 212 | pfam00326, Peptidase_S9, Prolyl oligopeptidase fam | 2e-04 | |
| COG2267 | 298 | COG2267, PldB, Lysophospholipase [Lipid metabolism | 2e-04 | |
| PRK11460 | 232 | PRK11460, PRK11460, putative hydrolase; Provisiona | 3e-04 | |
| pfam01738 | 215 | pfam01738, DLH, Dienelactone hydrolase family | 0.002 | |
| pfam05448 | 319 | pfam05448, AXE1, Acetyl xylan esterase (AXE1) | 0.004 |
| >gnl|CDD|216940 pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 1e-49
Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 7/209 (3%)
Query: 38 ARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI 96
A+ +++LHGLGD+G K P TK+ FP P PVT N G MP+WFDI
Sbjct: 10 AQATVIFLHGLGDTGHGWAFAAKCEAPLPH---TKFIFPHGPERPVTLNGGMRMPAWFDI 66
Query: 97 HEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP 156
+ + ++ +DE+ + + + +ID E+ GI + + + GFSQG A+ L + L P
Sbjct: 67 VGL--SPNASEDEAGIKNSAETIEELIDAELKTGIPASRIIIGGFSQGAAVALYTALTSP 124
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216
+ LGG FSG +P T A PIL HG D V G+ +L+
Sbjct: 125 QPLGGIIAFSGALPLPQKFPQHPTGVA-DIPILQLHGYEDPVVPLALGKLAKEYLKTLLN 183
Query: 217 SCEFKAYPGLGHSISNEELRNLESWIKTR 245
FK+YPG+GHSI +E+++++ ++
Sbjct: 184 PVTFKSYPGMGHSICPQEMQDIKKFLAKH 212
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This family consists of both phospholipases and carboxylesterases with broad substrate specificity, and is structurally related to alpha/beta hydrolases pfam00561. Length = 213 |
| >gnl|CDD|223477 COG0400, COG0400, Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 3e-31
Identities = 58/212 (27%), Positives = 80/212 (37%), Gaps = 27/212 (12%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA----PNNPVTCNYGAVMPSW 93
A ++ LHGLG L + P+A P PV N G
Sbjct: 17 AAPLLILLHGLGGDE-------LDL----VPLPELILPNATLVSPRGPVAENGGPRFFRR 65
Query: 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153
+D S E L+ + + + GID + + + GFSQG + L+ L
Sbjct: 66 YDE-------GSFDQEDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGL 118
Query: 154 LYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213
P G +FSG +P L D TPIL SHG D V +A +L
Sbjct: 119 TLPGLFAGAILFSGMLPLEPEL----LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTA 174
Query: 214 AGISCEFKAYPGLGHSISNEELRNLESWIKTR 245
+G E + + G GH I EEL SW+
Sbjct: 175 SGADVEVRWHEG-GHEIPPEELEAARSWLANT 205
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Length = 207 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 52.9 bits (127), Expect = 5e-08
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 32/150 (21%)
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG---WVPFNASLIDQ--------- 178
+DP + + G S GG +TL + PR A+ G + F S
Sbjct: 470 VDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGG 529
Query: 179 ---------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223
F +D KTP+L HG D V E + L++ G E +
Sbjct: 530 GPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF 589
Query: 224 PGLGHSISNEE-----LRNLESWIKTRMSC 248
P GH S E L+ + W K +
Sbjct: 590 PDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619
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Length = 620 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 2e-07
Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 28/148 (18%)
Query: 106 PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165
P+ SL ++ A++D + V + G S GGA+ LA+ P ++ G +
Sbjct: 42 PRTPYSLEDDAADLAALLDA-----LGLGPVVLVGHSLGGAVALAAAARRPERVAGLVLI 96
Query: 166 SGWVPFNASLIDQFTS-------------------DAKKTPILWSHGMADRTVLFEAGQA 206
S + L+ + P+L HG D V EA +
Sbjct: 97 SPPLRDLEELLAADAAALLALLRAALLDADLREALARLTVPVLVIHGEDDPLVPPEAARR 156
Query: 207 GPPFLEQAGISCEFKAYPGLGHSISNEE 234
L +A E PG GH E
Sbjct: 157 ----LAEALPGAELVVLPGAGHLPHLEH 180
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 9e-07
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTP 187
A +DP + + G S GG + L PR + +G P + + T P
Sbjct: 52 DAPLDPERIVLVGHSLGGGVALLLAARDPRVKAAVVLAAGDPPDALDDLAKLT-----VP 106
Query: 188 ILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229
+L HG D V E +A E G GHS
Sbjct: 107 VLIIHGTRDGVVPPEEAEA---LAAALPGPAELVVIEGAGHS 145
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This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|226040 COG3509, LpqC, Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 1e-05
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 121 AMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF 179
A++ K V GIDP V+V G S GG + YP A +G + +
Sbjct: 130 ALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVA----- 184
Query: 180 TSDAKKTPILWSHGMADRTVLFEAGQAG 207
+ + ++ HG AD + G
Sbjct: 185 CTPPRPVSVMAFHGTADPLNPYHGGGVP 212
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Length = 312 |
| >gnl|CDD|223489 COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 132 DPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKT--PIL 189
DP + V GF GG L L + P + F G LI T+DA K P+L
Sbjct: 110 DPKRIGVVGFCMGGGLALLAATRAPE-VKAAVAFYG------GLIADDTADAPKIKVPVL 162
Query: 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229
D + A LE AG+ + + YPG GH
Sbjct: 163 LHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHG 202
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Length = 236 |
| >gnl|CDD|233593 TIGR01840, esterase_phb, esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 27/110 (24%)
Query: 116 VRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-- 172
V ++H +ID A IDPN V+V G S GG +T YP GGA +G +P+
Sbjct: 76 VESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG-LPYGEA 134
Query: 173 ASLIDQFT-------------------SDAK-KTPIL--WSHGMADRTVL 200
+S I S+ TPI+ HG AD TVL
Sbjct: 135 SSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPIMSVV-HGDADYTVL 183
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi [Fatty acid and phospholipid metabolism, Degradation]. Length = 212 |
| >gnl|CDD|223730 COG0657, Aes, Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 6e-05
Identities = 35/164 (21%), Positives = 45/164 (27%), Gaps = 54/164 (32%)
Query: 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171
L A + GIDP+ + V G S GG L LA + L R G +P
Sbjct: 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALA-LALAARDRG------LPLPA 182
Query: 172 NASLIDQFTSDAKKTPILWSHGMAD-----------RTVLFEAGQAG------------- 207
LI L +G AD + A
Sbjct: 183 AQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDL 242
Query: 208 ---PPF--------------------LEQAGISCEFKAYPGLGH 228
PP L AG+ E + YPG+ H
Sbjct: 243 SGLPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIH 286
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Length = 312 |
| >gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 43/151 (28%)
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI---FSGWV-------PFNA------- 173
+DP+ + + G S GG LT A++ P W+ PF
Sbjct: 61 VDPDRLAIWGGSYGGYLTGAALNQRPDLFKAAVAVVPVVDWLTYMSDTSPFTERYMEWGN 120
Query: 174 -----------SLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPF-----LEQAGIS 217
S + + P+L HG+ D V L+ G +
Sbjct: 121 PWDNEEGYRYLSPYSPYDNVKAYPPLLLIHGLHDDRVPPA-----EALKLVAALQAKGKN 175
Query: 218 CEFKAYPGLGHSISN-----EELRNLESWIK 243
+P GH EE +++
Sbjct: 176 VLLLIFPDEGHGGGKPRNKREEYARELAFLL 206
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Length = 212 |
| >gnl|CDD|225176 COG2267, PldB, Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 158 KLGGGAIFSGWVP---FNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214
+G G S WV + + A P+L G DR V G A F E+A
Sbjct: 198 LIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLA--RFFERA 255
Query: 215 GISC-EFKAYPGLGHSISNE 233
G E K PG H + NE
Sbjct: 256 GSPDKELKVIPGAYHELLNE 275
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Length = 298 |
| >gnl|CDD|183144 PRK11460, PRK11460, putative hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 49/202 (24%), Positives = 71/202 (35%), Gaps = 32/202 (15%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA----PNNPVTCNYGAVMPSW 93
A+ +L HG+GD+ A I + F +FP A P GA W
Sbjct: 15 AQQLLLLFHGVGDNPVAMGEIGSWFAP--------AFPDALVVSVGGPEPSGNGAGR-QW 65
Query: 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA----GIDPNNVFVCGFSQGGALTL 149
F + I +++ + + I+ G+ + + GFSQG + L
Sbjct: 66 FSVQGI-------TEDNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMAL 118
Query: 150 ASVLLYPRKLGGGAI-FSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGP 208
+V P L G I FSG ASL + + T I HG D + A
Sbjct: 119 EAVKAEPG-LAGRVIAFSGRY---ASLPETAPTA---TTIHLIHGGEDPVIDVAHAVAAQ 171
Query: 209 PFLEQAGISCEFKAYPGLGHSI 230
L G LGH+I
Sbjct: 172 EALISLGGDVTLDIVEDLGHAI 193
|
Length = 232 |
| >gnl|CDD|216672 pfam01738, DLH, Dienelactone hydrolase family | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.002
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 18/110 (16%)
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPRK--LGGGAIFSGWVPFNASLIDQFTSDAKKTPI 188
+D V V GF GG L L + + F G L + + A K PI
Sbjct: 95 VDTKKVGVVGFCLGGRLAF----LLAARNGVDAAVSFYG-TGPEPPLDE---APAIKAPI 146
Query: 189 LWSHGMADRTVLFEAGQAGPPFLEQA----GISCEFKAYPGLGHSISNEE 234
L G D V EA LE+A + E YPG GH+ + +
Sbjct: 147 LAHFGEEDPFVPAEARDL----LEEALRAANVDHELHVYPGAGHAFAADG 192
|
Length = 215 |
| >gnl|CDD|203252 pfam05448, AXE1, Acetyl xylan esterase (AXE1) | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.004
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPR 157
+D + V G SQGGAL LA+ L PR
Sbjct: 171 VDEERIGVYGASQGGALALAAAALSPR 197
|
This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan. Length = 319 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 251 | |||
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 100.0 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.97 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.95 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.95 | |
| PRK10566 | 249 | esterase; Provisional | 99.93 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.93 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.93 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.93 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.93 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.92 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.91 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.91 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.9 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.9 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.89 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.89 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.89 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.88 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.88 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.88 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.88 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.87 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.87 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.87 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.87 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.87 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.86 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.86 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.86 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.86 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.85 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.85 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.85 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.85 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.85 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.84 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.84 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.84 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.84 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.83 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.83 | |
| PRK10115 | 686 | protease 2; Provisional | 99.83 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.82 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.82 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.82 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.82 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.82 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.82 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.81 | |
| PLN02578 | 354 | hydrolase | 99.81 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.81 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.8 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.8 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.8 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.79 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.79 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.79 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.79 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.78 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.78 | |
| PLN02511 | 388 | hydrolase | 99.78 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.77 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.76 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.76 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.76 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.76 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.76 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.76 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.75 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.75 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.75 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.75 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.73 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.73 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.73 | |
| PLN00021 | 313 | chlorophyllase | 99.72 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.71 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.7 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.7 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.7 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.7 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.69 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.68 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.68 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.68 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.68 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.66 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.66 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.63 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.63 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.6 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.6 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.59 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.55 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.55 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.52 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.52 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.52 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.5 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.5 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.49 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.49 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.48 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.47 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.47 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.47 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 99.47 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.44 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.44 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.43 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 99.41 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.4 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.4 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.4 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.39 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.38 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.37 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 99.35 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.34 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.32 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 99.3 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.29 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.28 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.28 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.27 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.26 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 99.26 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.24 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.21 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 99.19 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.15 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.14 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.13 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 99.13 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.13 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.1 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.07 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.05 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 98.97 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 98.97 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.97 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.95 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.91 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.9 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.89 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.88 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.87 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 98.84 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 98.83 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.83 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.8 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 98.78 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.77 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.7 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.7 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.67 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.63 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.61 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.57 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 98.54 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.52 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 98.5 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.47 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.46 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.46 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.42 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 98.39 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.38 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.34 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 98.27 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.25 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.22 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.21 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 98.17 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.1 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 98.08 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.04 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.98 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 97.83 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 97.83 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 97.81 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.79 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 97.69 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.64 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 97.6 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.53 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 97.52 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 97.36 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.36 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 97.36 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.31 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 97.25 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 97.22 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.21 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.12 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.01 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 96.8 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.77 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 96.71 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.69 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.69 | |
| PLN02454 | 414 | triacylglycerol lipase | 96.68 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 96.51 | |
| PLN02408 | 365 | phospholipase A1 | 96.49 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.46 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 96.43 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 96.34 | |
| PLN02802 | 509 | triacylglycerol lipase | 96.16 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 96.04 | |
| PLN02571 | 413 | triacylglycerol lipase | 96.01 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.0 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.98 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 95.78 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.73 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 95.65 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.62 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.62 | |
| PLN02209 | 437 | serine carboxypeptidase | 95.4 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 95.37 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 95.05 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.03 | |
| PLN02934 | 515 | triacylglycerol lipase | 94.98 | |
| PLN02761 | 527 | lipase class 3 family protein | 94.85 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 94.62 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 94.55 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 94.52 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.47 | |
| PLN02847 | 633 | triacylglycerol lipase | 93.73 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 92.47 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 92.47 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 91.05 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 90.97 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 90.64 | |
| PF09994 | 277 | DUF2235: Uncharacterized alpha/beta hydrolase doma | 90.49 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 89.71 | |
| ) proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor" target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF06309">PF06309 | 127 | Torsin: Torsin; InterPro: IPR010448 This family co | 89.11 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 89.06 | |
| COG3673 | 423 | Uncharacterized conserved protein [Function unknow | 88.06 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 87.45 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 86.14 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 85.67 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 84.72 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 84.26 | |
| PLN02209 | 437 | serine carboxypeptidase | 83.86 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 83.58 | |
| cd03557 | 484 | L-arabinose_isomerase L-Arabinose isomerase (AI) c | 83.51 | |
| KOG0256 | 471 | consensus 1-aminocyclopropane-1-carboxylate syntha | 83.11 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 82.9 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 82.31 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 81.12 |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=201.22 Aligned_cols=208 Identities=39% Similarity=0.652 Sum_probs=148.1
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.+++.++||++||+|.+...+..+.... .....+.+.+|.+|..+.+...|..+..||+....+. ....+..++.
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~--~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~--~~~~~~~~i~ 84 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELN--LALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDP--EGPEDEAGIE 84 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHH--TCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSS--SSEB-HHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhc--ccCCceEEEeccCCCCCcccccccCCCceeeccCCCc--chhhhHHHHH
Confidence 56788899999999999885544444421 2234456667777765555556666679998775421 1234678899
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
++++.+.++++...+.+++.++|++.|+|+||.+++.++.++|+.+++++++||+++........... ..++|++++||
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~-~~~~pi~~~hG 163 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEA-LAKTPILIIHG 163 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCC-CCTS-EEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccc-cCCCcEEEEec
Confidence 99999999999887778999999999999999999999999999999999999999876554433222 23789999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+.|+++|.+.++...+.|++.+.+++++.|+|+||....++++++.+||++++
T Consensus 164 ~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 164 DEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLEKHI 216 (216)
T ss_dssp TT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHHHH-
T ss_pred CCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHhhhC
Confidence 99999999999999999999999999999999999999999999999999864
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-28 Score=183.18 Aligned_cols=200 Identities=20% Similarity=0.250 Sum_probs=155.0
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.+++.|+||++||+|++..+|..+++.+...+..+..+. |.++... ....++.||+.... .......++.
T Consensus 11 ~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~-~~g~~~~----~~~~g~~W~~~~~~----~~~~~~~~~~ 81 (232)
T PRK11460 11 PDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVS-VGGPEPS----GNGAGRQWFSVQGI----TEDNRQARVA 81 (232)
T ss_pred CCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEEC-CCCCCCc----CCCCCcccccCCCC----CccchHHHHH
Confidence 3456679999999999999999999998876655444333 4343311 11235789875432 1122334556
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
+.++.+.+.++.+. +.+++.++|+++|||+||.+++.++.++|+.+++++.++|...... .....++|++++|
T Consensus 82 ~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~------~~~~~~~pvli~h 155 (232)
T PRK11460 82 AIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLP------ETAPTATTIHLIH 155 (232)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccccc------ccccCCCcEEEEe
Confidence 66666766666655 6677888999999999999999999999988888999988754211 1123579999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
|++|+++|.+.++++.+.|++.+.++++++|++++|.+..++++.+.+||.+.|..
T Consensus 156 G~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 156 GGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999999853
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=163.00 Aligned_cols=202 Identities=45% Similarity=0.747 Sum_probs=177.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
...+||++||.|.++..|.++.+ ...+.-+.+.+|.+|.++.+...|..+..||+....+ .+...+.+.+..+.+
T Consensus 2 h~atIi~LHglGDsg~~~~~~~~---~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~--~~~~~d~~~~~~aa~ 76 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWAQFLK---QLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELS--SDAPEDEEGLHRAAD 76 (206)
T ss_pred ceEEEEEEecCCCCCccHHHHHH---cCCCCCeeEEcCCCCCCcccccCCCcccceecceeeC--cccchhhhHHHHHHH
Confidence 35689999999999999866444 4677888999999999999999999999999987763 333448888999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
.+..++++....+++.++|++.|+|+||.++++++..+|..+.+++..+++.+......+.........|++..||+.|+
T Consensus 77 ~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~ 156 (206)
T KOG2112|consen 77 NIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADP 156 (206)
T ss_pred HHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCc
Confidence 99999999889999999999999999999999999999989999999999998554444444443348999999999999
Q ss_pred cccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 198 TVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
+||..-.+...+.|+..+.+++++.|+|.+|....++++++..|+.+
T Consensus 157 ~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 157 LVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred eeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=164.99 Aligned_cols=193 Identities=28% Similarity=0.452 Sum_probs=157.0
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.++..|+||++||.|++..++..+.+..... ..+..|.++.. ..++..+..|++...+ +.+++.
T Consensus 13 ~~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~----~~~is~rG~v~---~~g~~~~f~~~~~~~~--------d~edl~ 77 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDELDLVPLPELILPN----ATLVSPRGPVA---ENGGPRFFRRYDEGSF--------DQEDLD 77 (207)
T ss_pred CCCCCCcEEEEEecCCCChhhhhhhhhhcCCC----CeEEcCCCCcc---ccCcccceeecCCCcc--------chhhHH
Confidence 56667789999999999988888755544322 45555544432 3445555556554443 477888
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.....+.+.+.... +.+++.++++++|+|.|+.+++.+..++|..++++++++|..+..... ......+|+++++
T Consensus 78 ~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----~~~~~~~pill~h 153 (207)
T COG0400 78 LETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----LPDLAGTPILLSH 153 (207)
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc----ccccCCCeEEEec
Confidence 88888888877776 889999999999999999999999999999999999999988876542 2234689999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|+.|+++|...+.++.+.|++.|.+++...++ +||....++.+.+.+|+.+.+
T Consensus 154 G~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 154 GTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWLANTL 206 (207)
T ss_pred cCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999 699999999999999998764
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-25 Score=167.64 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=136.6
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+++.|+||++||++++...|..+++.|++.||.++.+|+|+++.+.... .......| ...+...
T Consensus 24 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~-~~~~~~~~---------------~~~~~~~ 87 (249)
T PRK10566 24 DTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGD-EARRLNHF---------------WQILLQN 87 (249)
T ss_pred CCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCc-cccchhhH---------------HHHHHHH
Confidence 3467999999999999888988999999999999999999875421000 00000011 1222333
Q ss_pred HHHHHHHHHHHHHc-CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec-cCCC------Ccch----------h--
Q 025550 116 VRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS-GWVP------FNAS----------L-- 175 (251)
Q Consensus 116 ~~~l~~~i~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~-~~~~------~~~~----------~-- 175 (251)
++++.+.+..+.+. .++.++++++|||+||.+++.++.++|+...+++.+. ++.. .... .
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEFNN 167 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHHHH
Confidence 44455555544433 3688999999999999999999998886433333332 2111 0000 0
Q ss_pred ----hhhhc----ccCC-CCCEEEEccCCCCcccchhcccchHHHHhcCCe--eEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 176 ----IDQFT----SDAK-KTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS--CEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 176 ----~~~~~----~~~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
...+. ..+. ++|+|+++|++|..++++.++.+.+.+++.|.+ ++++.++|.+|.+..+..+.+.+||++
T Consensus 168 ~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~fl~~ 247 (249)
T PRK10566 168 IVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRITPEALDAGVAFFRQ 247 (249)
T ss_pred HHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccCHHHHHHHHHHHHh
Confidence 00000 1123 689999999999999999999999999988764 788999999999999999999999998
Q ss_pred hh
Q 025550 245 RM 246 (251)
Q Consensus 245 ~l 246 (251)
+|
T Consensus 248 ~~ 249 (249)
T PRK10566 248 HL 249 (249)
T ss_pred hC
Confidence 65
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=167.69 Aligned_cols=201 Identities=17% Similarity=0.192 Sum_probs=143.6
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMP 91 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (251)
.++.++..+.++++.+ .+.++++|+++||++++...|..+++.|.+.||.++++|+||++.+...
T Consensus 5 ~~~~~g~~l~~~~~~~-------~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~-------- 69 (276)
T PHA02857 5 MFNLDNDYIYCKYWKP-------ITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGE-------- 69 (276)
T ss_pred eecCCCCEEEEEeccC-------CCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCc--------
Confidence 4555777777776763 2345688899999999999999999999989999999999988664210
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
.....+....++++...+..+.+ ....++++|+|||+||.+++.++.++|+.++++|++++....
T Consensus 70 --------------~~~~~~~~~~~~d~~~~l~~~~~-~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 70 --------------KMMIDDFGVYVRDVVQHVVTIKS-TYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA 134 (276)
T ss_pred --------------cCCcCCHHHHHHHHHHHHHHHHh-hCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc
Confidence 01122333444555555543321 233468999999999999999999999999999999985431
Q ss_pred cch--------------------------hh-----h-------h-----------------------hcccCCCCCEEE
Q 025550 172 NAS--------------------------LI-----D-------Q-----------------------FTSDAKKTPILW 190 (251)
Q Consensus 172 ~~~--------------------------~~-----~-------~-----------------------~~~~~~~~p~l~ 190 (251)
... .. . . -...+.++|+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 214 (276)
T PHA02857 135 EAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILI 214 (276)
T ss_pred ccccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEE
Confidence 100 00 0 0 001247899999
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH-------HHHHHHHHHHHh
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE-------ELRNLESWIKTR 245 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~ 245 (251)
++|++|.+++++.++.+.+.+.. +.+++++++++|.+..+ ..+++.+||.++
T Consensus 215 v~G~~D~i~~~~~~~~l~~~~~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 215 LQGTNNEISDVSGAYYFMQHANC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EecCCCCcCChHHHHHHHHHccC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999988777666633 46899999999987633 246777888775
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=160.67 Aligned_cols=186 Identities=19% Similarity=0.265 Sum_probs=143.2
Q ss_pred CCCccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+++.+|+++||+++.. ..|..++..|+..||.++.+|++|++.+. |. ..-..++..
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~Sd-----Gl-----------------~~yi~~~d~ 108 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSD-----GL-----------------HAYVPSFDL 108 (313)
T ss_pred CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCC-----CC-----------------cccCCcHHH
Confidence 47788999999999865 66777999999999999999999987752 11 112345566
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------------- 178 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------------- 178 (251)
.++++...++... +......+.+++||||||.+++.++.+.|..+.|+|++++.....+.....
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP 188 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIP 188 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCC
Confidence 6777777777644 444455678999999999999999999999999999998854432221000
Q ss_pred -h--------------------------------------------------cccCCCCCEEEEccCCCCcccchhcccc
Q 025550 179 -F--------------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 179 -~--------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
+ ...+...|++++||++|.++.++.++.+
T Consensus 189 ~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~L 268 (313)
T KOG1455|consen 189 TWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKEL 268 (313)
T ss_pred ceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHH
Confidence 0 0125889999999999999999999999
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCH----H----HHHHHHHHHHHh
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISN----E----ELRNLESWIKTR 245 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~----~----~~~~~~~~l~~~ 245 (251)
++..... ++++++|||+-|.+.. + ...+|++||.++
T Consensus 269 ye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 269 YEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9988775 6899999999998652 2 268888898875
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=181.98 Aligned_cols=216 Identities=21% Similarity=0.323 Sum_probs=153.2
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGA 88 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 88 (251)
+.-..++..+..|++.|+... +.++.|+||++||+..... .+....+.|+..||.++.+++++... +|
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~---~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~G------yG- 438 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFD---PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTG------YG- 438 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCC---CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCc------cH-
Confidence 344556778889888865544 3344899999999874433 35556778999999999999986532 12
Q ss_pred cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 89 VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 89 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..|.+... ..-+..+.+|+.+.++.+.+ ...+|++|++|+|+|+||++++.++...| .+++.++..+.
T Consensus 439 --~~F~~~~~---~~~g~~~~~D~~~~~~~l~~------~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~ 506 (620)
T COG1506 439 --REFADAIR---GDWGGVDLEDLIAAVDALVK------LPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGG 506 (620)
T ss_pred --HHHHHhhh---hccCCccHHHHHHHHHHHHh------CCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCc
Confidence 11211110 00112344444444443322 55678999999999999999999999988 67777666652
Q ss_pred CCCc------------------------chhhh----hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEE
Q 025550 169 VPFN------------------------ASLID----QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF 220 (251)
Q Consensus 169 ~~~~------------------------~~~~~----~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~ 220 (251)
.... ..... .....++++|+|++||+.|..++.++++.+++.|+..|.++++
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~ 586 (620)
T COG1506 507 VDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVEL 586 (620)
T ss_pred chhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEE
Confidence 2210 00011 1122458999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCH-----HHHHHHHHHHHHhhcC
Q 025550 221 KAYPGLGHSISN-----EELRNLESWIKTRMSC 248 (251)
Q Consensus 221 ~~~~g~~H~~~~-----~~~~~~~~~l~~~l~~ 248 (251)
++||+.+|++.. +...++.+|++++++.
T Consensus 587 ~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 587 VVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 999999999874 2478899999999864
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-24 Score=171.31 Aligned_cols=206 Identities=20% Similarity=0.237 Sum_probs=142.0
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC-chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+.++..+..+.+.+ +.++.+++|||+||++++... |..+++.|++.||.++.+|+||++.+.... +
T Consensus 66 ~~~~~g~~l~~~~~~p------~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~--~--- 134 (349)
T PLN02385 66 EVNSRGVEIFSKSWLP------ENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH--G--- 134 (349)
T ss_pred EEcCCCCEEEEEEEec------CCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC--C---
Confidence 3445555555555542 123466899999999987664 577888898889999999999886642110 0
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
...++.+.++++.++++.+. +...+..+++|+||||||.+++.++.++|+.++++|++++..
T Consensus 135 -----------------~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 135 -----------------YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred -----------------CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccc
Confidence 01234445566666665443 223345689999999999999999999999999999998743
Q ss_pred CCcc----------------------------hhhh-----------------hh---------------------cccC
Q 025550 170 PFNA----------------------------SLID-----------------QF---------------------TSDA 183 (251)
Q Consensus 170 ~~~~----------------------------~~~~-----------------~~---------------------~~~~ 183 (251)
.... .... .+ ...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 277 (349)
T PLN02385 198 KIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEE 277 (349)
T ss_pred cccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhccc
Confidence 2100 0000 00 0024
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH--------HHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE--------ELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~--------~~~~~~~~l~~~l~ 247 (251)
+++|+++++|++|.+++.+.++.+++.+.. .+.+++++++++|.+..+ ..+.+.+||.+++.
T Consensus 278 i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~--~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 278 VSLPLLILHGEADKVTDPSVSKFLYEKASS--SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCCCEEEEEeCCCCccChHHHHHHHHHcCC--CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 789999999999999999887777766643 246888999999987632 34668888888764
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-23 Score=163.77 Aligned_cols=206 Identities=17% Similarity=0.234 Sum_probs=141.5
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
.++..+.++.+.++ ...+.+++|||+||++.+. ..|..++..|++.||.++.+|+||++.+...
T Consensus 40 ~dg~~l~~~~~~~~-----~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~---------- 104 (330)
T PLN02298 40 PRGLSLFTRSWLPS-----SSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGL---------- 104 (330)
T ss_pred CCCCEEEEEEEecC-----CCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCc----------
Confidence 46666665555421 1124568999999998654 3456677788889999999999988764210
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
.....++...++++..+++.+. ....+..+++|+||||||.+++.++.++|+.++++|++++.....
T Consensus 105 ------------~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 105 ------------RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred ------------cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 0001234445666666666543 222344579999999999999999999999999999988753211
Q ss_pred ch----------------------------hhh-----------------hhc---------------------ccCCCC
Q 025550 173 AS----------------------------LID-----------------QFT---------------------SDAKKT 186 (251)
Q Consensus 173 ~~----------------------------~~~-----------------~~~---------------------~~~~~~ 186 (251)
.. ... .+. ...+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 252 (330)
T PLN02298 173 DKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI 252 (330)
T ss_pred cccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC
Confidence 00 000 000 023679
Q ss_pred CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH---H-----HHHHHHHHHHHhhcCC
Q 025550 187 PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN---E-----ELRNLESWIKTRMSCS 249 (251)
Q Consensus 187 p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~---~-----~~~~~~~~l~~~l~~~ 249 (251)
|+|+++|++|.+++++.++.+++.+... ..++++++|++|.... + ..+.+.+||.+++..+
T Consensus 253 PvLii~G~~D~ivp~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRALYEEAKSE--DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHhccC--CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999888887776542 3688899999998642 1 2567889998887643
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-24 Score=157.32 Aligned_cols=176 Identities=18% Similarity=0.231 Sum_probs=126.5
Q ss_pred chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCC
Q 025550 55 NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPN 134 (251)
Q Consensus 55 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 134 (251)
|.....+|+++||.++.+++|+.+.. | ..|..... ......++.+.++.+..+++ +..+|++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~------g---~~~~~~~~------~~~~~~~~~D~~~~i~~l~~---~~~iD~~ 64 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGY------G---KDFHEAGR------GDWGQADVDDVVAAIEYLIK---QYYIDPD 64 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSS------H---HHHHHTTT------TGTTHHHHHHHHHHHHHHHH---TTSEEEE
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCcc------c---hhHHHhhh------ccccccchhhHHHHHHHHhc---cccccce
Confidence 34456688899999999999976432 1 22322111 12233444444444444433 5678999
Q ss_pred cEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------------------hcccC--CC
Q 025550 135 NVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ---------------------------FTSDA--KK 185 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~---------------------------~~~~~--~~ 185 (251)
||+|+|+|+||.+++.++.++|+.+++++..+|..+........ ....+ .+
T Consensus 65 ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 144 (213)
T PF00326_consen 65 RIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIK 144 (213)
T ss_dssp EEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGG
T ss_pred eEEEEcccccccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCC
Confidence 99999999999999999999999999999999866543221110 00123 68
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-----HHHHHHHHHHHHHhhcC
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-----NEELRNLESWIKTRMSC 248 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 248 (251)
+|+|++||++|..||++++..+++.|++.|.+++++++|+++|.+. .+..+.+.+||+++|+.
T Consensus 145 ~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 145 PPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp SEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999776 23478899999999874
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=162.81 Aligned_cols=189 Identities=12% Similarity=0.031 Sum_probs=136.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.++||++||++++...|..++..+.+.||.++.+|+||++.+......+. .....++.+.++
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~-----------------~~~~~~~~~~~~ 115 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPH-----------------RGHVERFNDYVD 115 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCC-----------------cCccccHHHHHH
Confidence 457899999999988889999988888999999999998876431110000 001234566677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN------------------------- 172 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~------------------------- 172 (251)
++..+++.+.. ..+..++.++||||||.++..++.++|+.++++|++++.....
T Consensus 116 d~~~~~~~~~~-~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (330)
T PRK10749 116 DLAAFWQQEIQ-PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGY 194 (330)
T ss_pred HHHHHHHHHHh-cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcC
Confidence 77777765432 2245789999999999999999999999999999998753210
Q ss_pred --------------------chh----hh----h------------------------hcccCCCCCEEEEccCCCCccc
Q 025550 173 --------------------ASL----ID----Q------------------------FTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 173 --------------------~~~----~~----~------------------------~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
... .+ . ......+.|+|+++|++|.+++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~ 274 (330)
T PRK10749 195 AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVD 274 (330)
T ss_pred CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC
Confidence 000 00 0 0012478999999999999999
Q ss_pred chhcccchHHHHhcC---CeeEEEEeCCCCCCCCHH-------HHHHHHHHHHH
Q 025550 201 FEAGQAGPPFLEQAG---ISCEFKAYPGLGHSISNE-------ELRNLESWIKT 244 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~---~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~ 244 (251)
++.++.+++.+++.+ ..+++++++|++|....+ ..+++.+||.+
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 275 NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 998888888887764 346899999999987532 24556666654
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-21 Score=149.70 Aligned_cols=204 Identities=14% Similarity=0.106 Sum_probs=135.7
Q ss_pred CCccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCC--Ccc--cCCCCcCCccccccCCCCCCCCCCCh
Q 025550 37 MARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNN--PVT--CNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~--~~~--~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
++.|+|+++||++++...|.... ....+.|+.++.+|.+..+.. ... ...| ...+||-.... .......
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g-~~~~~~~d~~~---~~~~~~~ 115 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFG-KGAGFYVDATE---EPWSQHY 115 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccccccc-CCccccccCCc---Ccccccc
Confidence 45799999999999888875432 344557899998887432221 000 0000 01223211100 0000011
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------hh-------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------LI------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------~~------- 176 (251)
......++++..+++. ..+++.++++++||||||.+++.++.++|+.++++++++|....... ..
T Consensus 116 ~~~~~~~~~l~~~~~~--~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 193 (275)
T TIGR02821 116 RMYSYIVQELPALVAA--QFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAFSAYLGADE 193 (275)
T ss_pred hHHHHHHHHHHHHHHh--hCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHHHHHhcccc
Confidence 1222334455554542 34678889999999999999999999999999999999887533210 00
Q ss_pred ---h------hhcccCCCCCEEEEccCCCCcccc-hhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 177 ---D------QFTSDAKKTPILWSHGMADRTVLF-EAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 177 ---~------~~~~~~~~~p~l~~~g~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
. .........|+++.+|+.|..++. .+++.+.+.+++.|.++++.++||++|.+. ...+.+.++|..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~ 273 (275)
T TIGR02821 194 AAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYYFIASFIADHLRHHAE 273 (275)
T ss_pred cchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHHHHHh
Confidence 0 000112467999999999999998 577789999999999999999999999876 6678899999887
Q ss_pred hh
Q 025550 245 RM 246 (251)
Q Consensus 245 ~l 246 (251)
++
T Consensus 274 ~~ 275 (275)
T TIGR02821 274 RL 275 (275)
T ss_pred hC
Confidence 64
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=154.91 Aligned_cols=186 Identities=13% Similarity=0.095 Sum_probs=130.2
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPS 92 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~ 92 (251)
+.++..+.+++..|.. ....+.++||++||++.....+..++++|+++||.++++|++++ +.+...
T Consensus 16 ~~dG~~L~Gwl~~P~~----~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~--------- 82 (307)
T PRK13604 16 LENGQSIRVWETLPKE----NSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGT--------- 82 (307)
T ss_pred cCCCCEEEEEEEcCcc----cCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc---------
Confidence 4567888888887432 12456789999999999877788899999999999999999865 543211
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
+-+. . ......|+..++++++ +. +.++|+|+||||||.++..+|... .++++|+.+|+.+..
T Consensus 83 ~~~~-t------~s~g~~Dl~aaid~lk-------~~--~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 83 IDEF-T------MSIGKNSLLTVVDWLN-------TR--GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR 144 (307)
T ss_pred cccC-c------ccccHHHHHHHHHHHH-------hc--CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH
Confidence 1000 0 0112234444444442 22 346899999999999987665533 389999999976622
Q ss_pred ch--------------------------------hhhh-----hc--------ccCCCCCEEEEccCCCCcccchhcccc
Q 025550 173 AS--------------------------------LIDQ-----FT--------SDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 173 ~~--------------------------------~~~~-----~~--------~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
.. +... +. ....+.|+|++||+.|..|+++.++.+
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l 224 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDL 224 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHH
Confidence 00 0000 01 123679999999999999999999988
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCH
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISN 232 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~ 232 (251)
++.++. .++++++++|++|.+..
T Consensus 225 ~e~~~s--~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 225 LDSIRS--EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHhcc--CCcEEEEeCCCccccCc
Confidence 888764 36899999999999863
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=150.35 Aligned_cols=193 Identities=19% Similarity=0.252 Sum_probs=124.3
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCC-CCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPN-NPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.+.|.||++|+..+-....+.+++.|++.||.++.+|+-.... .+... ......+... ........
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~--~~~~~~~~~~-----------~~~~~~~~ 78 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDP--EEAFAAMREL-----------FAPRPEQV 78 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCH--HCHHHHHHHC-----------HHHSHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccch--hhHHHHHHHH-----------HhhhHHHH
Confidence 5889999999988877777779999999999999999753321 00000 0000000000 00002234
Q ss_pred HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccC
Q 025550 116 VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGM 194 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~ 194 (251)
.+.+...++.+. +..++.++|+++|+|+||.+++.++... +.+++++.+.|....... .....+.++|+++++|+
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~~---~~~~~~~~~P~l~~~g~ 154 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPPP---LEDAPKIKAPVLILFGE 154 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGGH---HHHGGG--S-EEEEEET
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCcc---hhhhcccCCCEeecCcc
Confidence 455555566555 3336778999999999999999998887 579999999982211111 11234578999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH------------HHHHHHHHHHHHhh
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN------------EELRNLESWIKTRM 246 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~------------~~~~~~~~~l~~~l 246 (251)
+|+.++.+..+.+.+.+++.+.++++++|+|++|.|.. +.++.+.+||+++|
T Consensus 155 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 155 NDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred CCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 99999999889999999999999999999999998852 23677888887765
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=152.98 Aligned_cols=183 Identities=11% Similarity=0.092 Sum_probs=130.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++++...|..+++.|.+.||.++++|+|+++.+... + .....++.+.++
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~---------~------------~~~~~~~~~~a~ 103 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKP---------T------------RREDYTYARHVE 103 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCC---------C------------CcccCCHHHHHH
Confidence 3578999999999999999999999878999999999988653110 0 011234556677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------ 173 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------ 173 (251)
++.+++++ . +.+++.++|||+||.++..++.++|+.+++++++++..+...
T Consensus 104 ~l~~~l~~---l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T PRK00870 104 WMRSWFEQ---L--DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGR 178 (302)
T ss_pred HHHHHHHH---c--CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHH
Confidence 77777763 2 346899999999999999999999999999998875321100
Q ss_pred ------------hhhhhh-------------------------------------cccCCCCCEEEEccCCCCcccchhc
Q 025550 174 ------------SLIDQF-------------------------------------TSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 174 ------------~~~~~~-------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
.....+ ...++++|+++++|++|.+++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 257 (302)
T PRK00870 179 LVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD- 257 (302)
T ss_pred HhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-
Confidence 000000 002367899999999999998754
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
+.+.+.+... ..+++.+++++||....+..+.+.+.|.+++..
T Consensus 258 ~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 258 AILQKRIPGA-AGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred HHHHhhcccc-cccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 4454444331 013477899999999877777777777777654
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-22 Score=151.18 Aligned_cols=179 Identities=17% Similarity=0.262 Sum_probs=131.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.|+||++||++++...|..+++.+. .+|.++.+|+||++.+... .....++.+.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~ 67 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGE----------------------LPPGYSIAHMA 67 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCC----------------------CcccCCHHHHH
Confidence 456899999999999999988888776 5799999999987654211 11223455666
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh--------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI-------------------- 176 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~-------------------- 176 (251)
+++.++++. . +.++++++|||+||.+++.++.++|+.++++|+++++........
T Consensus 68 ~~~~~~i~~---~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T TIGR03611 68 DDVLQLLDA---L--NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVH 142 (257)
T ss_pred HHHHHHHHH---h--CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhh
Confidence 677777663 2 346899999999999999999999999999998887443210000
Q ss_pred -------------h-----------h-----------------------hcccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 177 -------------D-----------Q-----------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 177 -------------~-----------~-----------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
. . ......++|+++++|++|..++.+.++.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~ 222 (257)
T TIGR03611 143 AQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAA 222 (257)
T ss_pred hhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHH
Confidence 0 0 0012368999999999999999887766665
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. ..+++.++++||....+..+++.+.+.++|.
T Consensus 223 ~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 223 ALP----NAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred hcC----CceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 543 3578889999999887777777777777664
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=146.21 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=131.3
Q ss_pred CCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCC--C-cCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYG--A-VMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g--~-~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+|+++||++++...|.. +.+.+...|+.++.+|.+..+........+ . ...+++..... ......
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 119 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQ----EKWKNW 119 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeecccc----CCCccc
Confidence 4578999999999988776644 335667789988888876443210000000 0 00111100000 000001
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-h-------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-L------------- 175 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-~------------- 175 (251)
.......+++...++... ..++.++++|+||||||.+++.++.++|+.++++++++|....... .
T Consensus 120 ~~~~~~~~~l~~~i~~~~-~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 198 (283)
T PLN02442 120 RMYDYVVKELPKLLSDNF-DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAFTNYLGSDK 198 (283)
T ss_pred chhhhHHHHHHHHHHHHH-HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHHHHHcCCCh
Confidence 112223444555554432 1257789999999999999999999999999999999987643210 0
Q ss_pred --hhhhc-------ccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHH
Q 025550 176 --IDQFT-------SDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIK 243 (251)
Q Consensus 176 --~~~~~-------~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 243 (251)
..... ....++|+++++|++|..++.. +++.+++.+++.|.++++++++|.+|.+. ...+++...|..
T Consensus 199 ~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~ 278 (283)
T PLN02442 199 ADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYFFIATFIDDHINHHA 278 (283)
T ss_pred hhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHHHHHHHHHHHHHHHH
Confidence 00000 1136789999999999998864 46789999999999999999999999865 333455555555
Q ss_pred Hhhc
Q 025550 244 TRMS 247 (251)
Q Consensus 244 ~~l~ 247 (251)
+.++
T Consensus 279 ~~~~ 282 (283)
T PLN02442 279 QALK 282 (283)
T ss_pred HHhc
Confidence 5543
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=149.37 Aligned_cols=178 Identities=15% Similarity=0.122 Sum_probs=130.8
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
..|||+||++.+...|..+++.|.+.+|.++.+|+||++.+... .....++.+.++++
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~a~dl 61 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTD----------------------SNTVSSSDQYNRPL 61 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCC----------------------ccccCCHHHHHHHH
Confidence 34999999999999999999999888999999999988654211 01123355667777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----c---------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----A--------------------- 173 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----~--------------------- 173 (251)
.++++. .+. .+++.++||||||.++..++.++|+++++++++++..... .
T Consensus 62 ~~~l~~---l~~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T PLN02965 62 FALLSD---LPP-DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGP 137 (255)
T ss_pred HHHHHh---cCC-CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCC
Confidence 777773 222 2589999999999999999999999999999887541000 0
Q ss_pred -----------hhh-hh-hc-------------------------------ccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 174 -----------SLI-DQ-FT-------------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 174 -----------~~~-~~-~~-------------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
... .. +. ....++|+++++|++|..++++.++.+.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~ 217 (255)
T PLN02965 138 DKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVE 217 (255)
T ss_pred CCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHH
Confidence 000 00 00 01378999999999999999876655555
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.. .++++++++||+...+..+.+.+.|.+++.
T Consensus 218 ~~~~----a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 218 NWPP----AQTYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred hCCc----ceEEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 4443 588899999999998888887777777664
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6e-21 Score=147.80 Aligned_cols=202 Identities=22% Similarity=0.349 Sum_probs=144.6
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
..++..+..+.+. +.+++..+||++||.+.+...|..++..|..+||.++.+|.||++.+.. |.
T Consensus 16 ~~d~~~~~~~~~~-------~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r----~~----- 79 (298)
T COG2267 16 GADGTRLRYRTWA-------APEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPR----GQ----- 79 (298)
T ss_pred cCCCceEEEEeec-------CCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCC----CC-----
Confidence 3455555544454 2333448999999999999999999999999999999999999877531 10
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~ 173 (251)
.....++.+.+.++..+++..... ....+++|+||||||.+++.++.+++..+.++|+.+|.+....
T Consensus 80 ------------rg~~~~f~~~~~dl~~~~~~~~~~-~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~ 146 (298)
T COG2267 80 ------------RGHVDSFADYVDDLDAFVETIAEP-DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG 146 (298)
T ss_pred ------------cCCchhHHHHHHHHHHHHHHHhcc-CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh
Confidence 112233556666666666654322 2457899999999999999999999999999999998665441
Q ss_pred --h--------------------hhh----h-----hc---------------------------------------ccC
Q 025550 174 --S--------------------LID----Q-----FT---------------------------------------SDA 183 (251)
Q Consensus 174 --~--------------------~~~----~-----~~---------------------------------------~~~ 183 (251)
. ... . .+ ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~ 226 (298)
T COG2267 147 AILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPA 226 (298)
T ss_pred hHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcccc
Confidence 0 000 0 00 013
Q ss_pred CCCCEEEEccCCCCccc-chhcccchHHHHhcCCe-eEEEEeCCCCCCCCHH-------HHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVL-FEAGQAGPPFLEQAGIS-CEFKAYPGLGHSISNE-------ELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~-~~~~~~~~~~l~~~~~~-~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~l~ 247 (251)
..+|+++++|++|.+++ .+ ...+.++..+.+ +++++++|+-|....| ..+.+.+|+.+.++
T Consensus 227 ~~~PvLll~g~~D~vv~~~~---~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 227 IALPVLLLQGGDDRVVDNVE---GLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccCCEEEEecCCCccccCcH---HHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999 45 455555555555 6999999999987532 35677777777664
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-20 Score=146.72 Aligned_cols=182 Identities=20% Similarity=0.324 Sum_probs=135.0
Q ss_pred CccEEEEEecCCC---CCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGD---SGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..|+||++||+|. +...+..+++.++. .|+.++.+||+.+|+.+. +....++.
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~-----------------------p~~~~D~~ 136 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF-----------------------PQAIEEIV 136 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC-----------------------CCcHHHHH
Confidence 4689999999883 44556667776665 599999999998775321 33456677
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCCCCcchhh-----------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWVPFNASLI----------- 176 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~~~~~~~~----------- 176 (251)
++++++.+..+ +.+++.++|+|+|+|+||.+++.++.+. +..++++++++|.........
T Consensus 137 ~a~~~l~~~~~---~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l 213 (318)
T PRK10162 137 AVCCYFHQHAE---DYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGL 213 (318)
T ss_pred HHHHHHHHhHH---HhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCcccc
Confidence 77777766555 5678889999999999999999988753 246889999988664321100
Q ss_pred ---------------------hhhcc--c---CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 177 ---------------------DQFTS--D---AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 177 ---------------------~~~~~--~---~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
....+ . ..-.|+++++|+.|.+. ++++.+.++|++.|+++++++++|..|.+
T Consensus 214 ~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv~v~~~~~~g~~H~f 291 (318)
T PRK10162 214 TQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQPCEFKLYPGTLHAF 291 (318)
T ss_pred CHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCCCEEEEEECCCceeh
Confidence 00000 0 12369999999999885 47889999999999999999999999986
Q ss_pred C---------HHHHHHHHHHHHHhhc
Q 025550 231 S---------NEELRNLESWIKTRMS 247 (251)
Q Consensus 231 ~---------~~~~~~~~~~l~~~l~ 247 (251)
. .+..+++.+||++.++
T Consensus 292 ~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 292 LHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred hhccCchHHHHHHHHHHHHHHHHHhc
Confidence 4 1336778888888775
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-22 Score=138.44 Aligned_cols=145 Identities=22% Similarity=0.347 Sum_probs=110.5
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
+||++||++++...|..+++.+++.||.++.+|+|+.+.. ....+ ++.+.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~----~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDS--------------------------DGADA----VERVL 50 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTS--------------------------HHSHH----HHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCcc--------------------------chhHH----HHHHH
Confidence 5899999999998899999999999999999999865331 01112 22222
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCccc
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
+.+.. ... +.++++++|||+||.+++.++.++ ..++++++++++.. .. .....+.|+++++|++|..++
T Consensus 51 ~~~~~--~~~-~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-~~------~~~~~~~pv~~i~g~~D~~~~ 119 (145)
T PF12695_consen 51 ADIRA--GYP-DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD-SE------DLAKIRIPVLFIHGENDPLVP 119 (145)
T ss_dssp HHHHH--HHC-TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG-CH------HHTTTTSEEEEEEETT-SSSH
T ss_pred HHHHh--hcC-CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc-hh------hhhccCCcEEEEEECCCCcCC
Confidence 22211 223 788999999999999999999988 57999999999422 11 113467899999999999999
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+..+.+++.++ .+.++++++|++|+
T Consensus 120 ~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 120 PEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred HHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 998888877776 46899999999995
|
... |
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.6e-21 Score=148.43 Aligned_cols=176 Identities=15% Similarity=0.146 Sum_probs=126.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|||+||++++...|..+.+.|.+ +|.++++|+||++.+.. +....++....+
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~-----------------------~~~~~~~~~~~~ 79 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSST-----------------------PRHPYRFPGLAK 79 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCC-----------------------CCCcCcHHHHHH
Confidence 346799999999999999999998864 79999999998866421 111223455566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-------------c--hh-------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-------------A--SL------- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-------------~--~~------- 175 (251)
++.++++.+ +.+++.|+||||||.+++.+|.++|+.+++++++++..... . ..
T Consensus 80 ~~~~~i~~l-----~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (276)
T TIGR02240 80 LAARMLDYL-----DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGI 154 (276)
T ss_pred HHHHHHHHh-----CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcccccc
Confidence 666666632 34689999999999999999999999999999987643100 0 00
Q ss_pred ---h--------h------h----------------------h---c-ccCCCCCEEEEccCCCCcccchhcccchHHHH
Q 025550 176 ---I--------D------Q----------------------F---T-SDAKKTPILWSHGMADRTVLFEAGQAGPPFLE 212 (251)
Q Consensus 176 ---~--------~------~----------------------~---~-~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~ 212 (251)
. . . . . ..++++|+++++|++|..++.+.++.+.+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~ 234 (276)
T TIGR02240 155 HIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP 234 (276)
T ss_pred chhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC
Confidence 0 0 0 0 0 02477899999999999999887766665553
Q ss_pred hcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 213 QAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 213 ~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+++++++ ||....+..+.+.+.+.+++.
T Consensus 235 ----~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~ 264 (276)
T TIGR02240 235 ----NAELHIIDD-GHLFLITRAEAVAPIIMKFLA 264 (276)
T ss_pred ----CCEEEEEcC-CCchhhccHHHHHHHHHHHHH
Confidence 357777886 999887776666666666654
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.9e-21 Score=148.48 Aligned_cols=183 Identities=15% Similarity=0.173 Sum_probs=130.1
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+.+.|... ++++.+|+||++.+....... + ......++.+.+++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~-----~-----------~~~~~~~~~~~a~~ 91 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRS-----A-----------PPNSFYTFETWGEQ 91 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCcccc-----c-----------cccccCCHHHHHHH
Confidence 378999999999999999999988755 699999999887643110000 0 00112455566777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc---------ch----h----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN---------AS----L---------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~---------~~----~---------- 175 (251)
+.+++++ .+ .+++.|+||||||.+++.++.++|++++++|++++..... .. +
T Consensus 92 l~~~l~~---l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
T PLN02824 92 LNDFCSD---VV--GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVG 166 (294)
T ss_pred HHHHHHH---hc--CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHH
Confidence 7777763 33 4689999999999999999999999999999988643100 00 0
Q ss_pred -------------hh----------h-------------------------h--c--------ccCCCCCEEEEccCCCC
Q 025550 176 -------------ID----------Q-------------------------F--T--------SDAKKTPILWSHGMADR 197 (251)
Q Consensus 176 -------------~~----------~-------------------------~--~--------~~~~~~p~l~~~g~~D~ 197 (251)
.. . . . ..++++|+++++|++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 246 (294)
T PLN02824 167 KAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDP 246 (294)
T ss_pred HHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCC
Confidence 00 0 0 0 01368899999999999
Q ss_pred cccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 198 TVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.++.+.++. +.+.....++++++++||....+..+.+.+-|.+++.
T Consensus 247 ~~~~~~~~~----~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 247 WEPVELGRA----YANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred CCChHHHHH----HHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 999876544 3333333688999999999988887777777777664
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=150.84 Aligned_cols=197 Identities=15% Similarity=0.127 Sum_probs=131.9
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
.++..+..|+..|. .+++.|+||++||.++.. ..|..+++.+++.||.++.+|+|+.+.+.. +
T Consensus 176 ~~g~~l~g~l~~P~------~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~----------~ 239 (414)
T PRK05077 176 PGGGPITGFLHLPK------GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK----------W 239 (414)
T ss_pred CCCcEEEEEEEECC------CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC----------C
Confidence 34447777776532 235678888888877765 456678888999999999999998755310 0
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN- 172 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~- 172 (251)
.. ..+.......+.+.+.. ...+|.++|+++|||+||.+++.+|..+|++++++|++++.....
T Consensus 240 ------------~~-~~d~~~~~~avld~l~~--~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~ 304 (414)
T PRK05077 240 ------------KL-TQDSSLLHQAVLNALPN--VPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLL 304 (414)
T ss_pred ------------Cc-cccHHHHHHHHHHHHHh--CcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhh
Confidence 00 01111112222222221 345688999999999999999999999998999999988755310
Q ss_pred ----------ch----hhhh-----------------hc-------ccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 173 ----------AS----LIDQ-----------------FT-------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 173 ----------~~----~~~~-----------------~~-------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.. +... +. ..+.++|+|+++|++|.++|.+.++.+.+..
T Consensus 305 ~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~--- 381 (414)
T PRK05077 305 TDPKRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS--- 381 (414)
T ss_pred cchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC---
Confidence 00 0000 00 1247789999999999999999776554433
Q ss_pred CCeeEEEEeCCCCCCC-CHHHHHHHHHHHHHhh
Q 025550 215 GISCEFKAYPGLGHSI-SNEELRNLESWIKTRM 246 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~-~~~~~~~~~~~l~~~l 246 (251)
.+.++++++++.|.- ..+..+.+.+||.++|
T Consensus 382 -~~~~l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 382 -ADGKLLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred -CCCeEEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 346888999863322 2455788999998876
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=150.42 Aligned_cols=186 Identities=23% Similarity=0.298 Sum_probs=130.2
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
...+++||++||++++...|..+++.|++.||.++.+|+++++.+.... + ...+....
T Consensus 133 ~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~--~--------------------~~~~~~~~ 190 (395)
T PLN02652 133 GEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH--G--------------------YVPSLDYV 190 (395)
T ss_pred CCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--C--------------------CCcCHHHH
Confidence 3456899999999998888999999999999999999999886642110 0 01123334
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcch------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNAS------------------ 174 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~------------------ 174 (251)
.+++..+++.+... .+..+++|+||||||.+++.++. +|+ .++++|+.+++......
T Consensus 191 ~~Dl~~~l~~l~~~-~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 191 VEDTEAFLEKIRSE-NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHHHHHHHHh-CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 44555555543221 23457999999999999987664 553 68999999886422100
Q ss_pred ------------------hhhhh---------------------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 175 ------------------LIDQF---------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 175 ------------------~~~~~---------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
....+ ...++++|+|+++|++|.+++++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 00000 002368999999999999999998877777
Q ss_pred HHHhcCCeeEEEEeCCCCCCCC-----HHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSIS-----NEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~ 247 (251)
.+.. ..+++++++|++|... .+..+.+.+||..++.
T Consensus 349 ~~~~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 349 EAAS--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred hcCC--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 6644 2467889999999863 2346788899988875
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-21 Score=136.40 Aligned_cols=176 Identities=18% Similarity=0.227 Sum_probs=128.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
..+|+++||+.++..+.+.+++.|+++||.+.++.|||++..+..... ....+..+.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-----------------------t~~~DW~~~ 71 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-----------------------TTPRDWWED 71 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-----------------------CCHHHHHHH
Confidence 389999999999999999999999999999999999998775422111 111122333
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--h----h---hh-----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--L----I---DQ----------- 178 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--~----~---~~----------- 178 (251)
+.+..+.+...+ -+.|.++|.||||.+++.+|.++| +++++.+|+....... . . +.
T Consensus 72 v~d~Y~~L~~~g--y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~ 147 (243)
T COG1647 72 VEDGYRDLKEAG--YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQ 147 (243)
T ss_pred HHHHHHHHHHcC--CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHH
Confidence 333333322233 458999999999999999999998 8899988875542211 0 0 00
Q ss_pred -------hc--------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 179 -------FT--------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 179 -------~~--------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
+. ...+..|++++.|.+|+.++.+.+..+++..... +.++..|++.||...
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e~SgHVIt 225 (243)
T COG1647 148 IDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLEGSGHVIT 225 (243)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC--cceeEEEccCCceee
Confidence 00 1248899999999999999999998888888764 689999999999987
Q ss_pred HHH-----HHHHHHHHH
Q 025550 232 NEE-----LRNLESWIK 243 (251)
Q Consensus 232 ~~~-----~~~~~~~l~ 243 (251)
.+. .+.+..||+
T Consensus 226 ~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 226 LDKERDQVEEDVITFLE 242 (243)
T ss_pred cchhHHHHHHHHHHHhh
Confidence 432 355556654
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=136.14 Aligned_cols=211 Identities=17% Similarity=0.254 Sum_probs=152.0
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
..+..+..|+..|. .....|.||++|+..+-....+.+++.++..||.++++|+-........... ...+.
T Consensus 9 ~~~~~~~~~~a~P~------~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~---~~~~~ 79 (236)
T COG0412 9 APDGELPAYLARPA------GAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIED---EPAEL 79 (236)
T ss_pred CCCceEeEEEecCC------cCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccc---cHHHH
Confidence 34466666666521 2223399999999999888999999999999999999997543221111110 00000
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC-CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG-IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~ 173 (251)
.. ........ .+...++...++.+.+.. ++.++|+++|+|+||.+++.++...| .+++.+++.|......
T Consensus 80 ~~-------~~~~~~~~-~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~ 150 (236)
T COG0412 80 ET-------GLVERVDP-AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD 150 (236)
T ss_pred hh-------hhhccCCH-HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc
Confidence 00 00001111 455666666666655333 78899999999999999999998888 6999999998765433
Q ss_pred hhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH---------------HHHHH
Q 025550 174 SLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE---------------ELRNL 238 (251)
Q Consensus 174 ~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~---------------~~~~~ 238 (251)
.. ...+.++|+++.+|+.|..++.+..+.+.+.+.+.+..+++.+|+++.|.|..+ .++++
T Consensus 151 ~~----~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~ 226 (236)
T COG0412 151 TA----DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRV 226 (236)
T ss_pred cc----ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHH
Confidence 22 135689999999999999999999999999999988889999999988987632 26888
Q ss_pred HHHHHHhhc
Q 025550 239 ESWIKTRMS 247 (251)
Q Consensus 239 ~~~l~~~l~ 247 (251)
.+||.+.+.
T Consensus 227 ~~ff~~~~~ 235 (236)
T COG0412 227 LAFFKRLLG 235 (236)
T ss_pred HHHHHHhcc
Confidence 899988775
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=144.32 Aligned_cols=177 Identities=14% Similarity=0.088 Sum_probs=126.0
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...|.||++||++++...|..++..|. .+|.++.+|+|+++.+.. ....++.+.+
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~------------------------~~~~~~~~~~ 68 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPR------------------------DPVMNYPAMA 68 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCC------------------------CCCCCHHHHH
Confidence 456899999999999989988888886 579999999998755310 1123455667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--------------------hh-
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--------------------SL- 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--------------------~~- 175 (251)
+++.++++. . +.+++.|+||||||.+++.++.++|+++++++++++...... ..
T Consensus 69 ~d~~~~l~~---l--~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (255)
T PRK10673 69 QDLLDTLDA---L--QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQ 143 (255)
T ss_pred HHHHHHHHH---c--CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHH
Confidence 777777763 2 346799999999999999999999999999998753211000 00
Q ss_pred ------hhh-----------------------------hc-------ccCCCCCEEEEccCCCCcccchhcccchHHHHh
Q 025550 176 ------IDQ-----------------------------FT-------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213 (251)
Q Consensus 176 ------~~~-----------------------------~~-------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~ 213 (251)
... .. ....++|+++++|++|..++.+..+.+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-- 221 (255)
T PRK10673 144 QAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF-- 221 (255)
T ss_pred HHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC--
Confidence 000 00 0124689999999999998876544444433
Q ss_pred cCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 214 AGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 214 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.++++++++||....+..+.+.+-+.++|.
T Consensus 222 --~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 222 --PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred --CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHh
Confidence 34688899999999877666666666666654
|
|
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=145.08 Aligned_cols=178 Identities=19% Similarity=0.241 Sum_probs=122.9
Q ss_pred ccEEEEEecCCCCCCCchhh---hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPI---KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|.||++||++.+...|..+ ...+.+.||.++++|+||++.+.... ....... ..
T Consensus 30 ~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~---------------------~~~~~~~-~~ 87 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVV---------------------MDEQRGL-VN 87 (282)
T ss_pred CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCc---------------------Ccccccc-hh
Confidence 36799999999887777542 34566679999999999876542110 0000111 12
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC------cc----------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF------NA---------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~------~~---------------- 173 (251)
.+.+.++++. ++.++++++||||||.+++.++.++|+++++++++++.... ..
T Consensus 88 ~~~l~~~l~~-----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (282)
T TIGR03343 88 ARAVKGLMDA-----LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSY 162 (282)
T ss_pred HHHHHHHHHH-----cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCH
Confidence 4455555552 25679999999999999999999999999999988753100 00
Q ss_pred -------------------hhhh--------------hh----------------cccCCCCCEEEEccCCCCcccchhc
Q 025550 174 -------------------SLID--------------QF----------------TSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 174 -------------------~~~~--------------~~----------------~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
.... .+ ....+++|+++++|++|..++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~ 242 (282)
T TIGR03343 163 ETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHG 242 (282)
T ss_pred HHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhH
Confidence 0000 00 0013679999999999999998876
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.+.+. ++++++++++||....+..+.+.+.|.++++
T Consensus 243 ~~~~~~~~----~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 243 LKLLWNMP----DAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhCC----CCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 66555553 4688999999999988877777777777664
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-20 Score=144.10 Aligned_cols=177 Identities=17% Similarity=0.153 Sum_probs=126.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.||++||++++...|..+.+.++ .+|.++.+|+|+++.+... .....++...++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~~ 83 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAP----------------------FRFRFTLPSMAE 83 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCc----------------------cccCCCHHHHHH
Confidence 35789999999999999999888886 4699999999987653211 011234555566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------ 173 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------ 173 (251)
++.++++ .. +.++++|+|||+||.+++.++.++|+++++++++++......
T Consensus 84 ~l~~~i~---~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (278)
T TIGR03056 84 DLSALCA---AE--GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMM 158 (278)
T ss_pred HHHHHHH---Hc--CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHH
Confidence 6666665 32 346789999999999999999999998998888765321000
Q ss_pred --------hhh------------------h-hh-----------------------cccCCCCCEEEEccCCCCcccchh
Q 025550 174 --------SLI------------------D-QF-----------------------TSDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 174 --------~~~------------------~-~~-----------------------~~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
... . .. ...++++|+++++|++|..++.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~ 238 (278)
T TIGR03056 159 SRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDE 238 (278)
T ss_pred HhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHH
Confidence 000 0 00 012357899999999999999886
Q ss_pred cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 204 GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++.+.+.+. ..+++.++++||.+..+..+.+.+-|.+++
T Consensus 239 ~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 239 SKRAATRVP----TATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred HHHHHHhcc----CCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 655554443 357889999999988777777777666665
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=140.81 Aligned_cols=169 Identities=22% Similarity=0.373 Sum_probs=126.7
Q ss_pred EEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (251)
|||+||++++...|..+++.|+ +||.++.+|+|+.+.+.... .....+..+.++++.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~---------------------~~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPP---------------------DYSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHS---------------------SGSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCcccccccc---------------------ccCCcchhhhhhhhhh
Confidence 7999999999999999999885 89999999999876542111 0123456666777777
Q ss_pred HHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--------hhhh---------------
Q 025550 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------LIDQ--------------- 178 (251)
Q Consensus 122 ~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------~~~~--------------- 178 (251)
+++. .+ .+++.++|||+||.+++.++.++|+.+++++++++....... ....
T Consensus 59 ~l~~---~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (228)
T PF12697_consen 59 LLDA---LG--IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASR 133 (228)
T ss_dssp HHHH---TT--TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccc---cc--cccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccc
Confidence 7773 33 368999999999999999999999999999999987742110 0000
Q ss_pred -------------------------h-----------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 179 -------------------------F-----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 179 -------------------------~-----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
+ .....++|+++++|++|..++.+..+.+.+.+ .++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~ 209 (228)
T PF12697_consen 134 FFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELVV 209 (228)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEEE
Confidence 0 00247899999999999999866544443333 3579999
Q ss_pred eCCCCCCCCHHHHHHHHHH
Q 025550 223 YPGLGHSISNEELRNLESW 241 (251)
Q Consensus 223 ~~g~~H~~~~~~~~~~~~~ 241 (251)
++++||....+..+++.+|
T Consensus 210 ~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 210 IPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp ETTSSSTHHHHSHHHHHHH
T ss_pred ECCCCCccHHHCHHHHhcC
Confidence 9999999988888888765
|
... |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=142.61 Aligned_cols=176 Identities=16% Similarity=0.261 Sum_probs=127.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
.+|+||++||++.+...|..+++.+. .+|.++.+|+|+++.+.. .....+..+.++
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~-----------------------~~~~~~~~~~~~ 67 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDA-----------------------PEGPYSIEDLAD 67 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHH
Confidence 56899999999999999999888886 689999999998755310 111224445566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--h---------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--S--------------------- 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~--------------------- 174 (251)
++.+.++. . +.+++.++|||+||.+++.+|.++|+.+++++++++...... .
T Consensus 68 ~~~~~i~~---~--~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (251)
T TIGR02427 68 DVLALLDH---L--GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVL 142 (251)
T ss_pred HHHHHHHH---h--CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHH
Confidence 66666653 2 346899999999999999999999999998887764321100 0
Q ss_pred ------------------hhhh---------------h-------cccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 175 ------------------LIDQ---------------F-------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 175 ------------------~~~~---------------~-------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.... + ...+.++|+++++|++|..++.+..+.+.+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-- 220 (251)
T TIGR02427 143 ERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-- 220 (251)
T ss_pred HHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--
Confidence 0000 0 002367999999999999999886655554443
Q ss_pred CCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 215 GISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
..+++.+++++|....+..+.+.+.+.+++
T Consensus 221 --~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 221 --GARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred --CceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 358889999999988777777777777765
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=139.19 Aligned_cols=163 Identities=28% Similarity=0.295 Sum_probs=108.8
Q ss_pred CCCccEEEEEecCCCCCCCch---hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPANE---PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+++.|+||++||++++...+. .+...+.+.|+.++.+++++.... ....+|+..... .....+..++
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~-------~~~~~~~~~~~~---~~~~~~~~~~ 79 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSS-------NNCWDWFFTHHR---ARGTGEVESL 79 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCcccc-------CCCCCCCCcccc---CCCCccHHHH
Confidence 467899999999998776665 255566678999999998865321 112244432210 0111122233
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------h
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-----------------L 175 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-----------------~ 175 (251)
.+.++.+.+ +..++.++++|+|||+||.+++.++.++|+.+++++.++|....... +
T Consensus 80 ~~~i~~~~~------~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (212)
T TIGR01840 80 HQLIDAVKA------NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASV 153 (212)
T ss_pred HHHHHHHHH------hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHH
Confidence 222222222 56788899999999999999999999999999999999986532110 0
Q ss_pred hhhhc----c-cCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 176 IDQFT----S-DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 176 ~~~~~----~-~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.+... . .....|++++||++|.+|+++.++.+.+++++.
T Consensus 154 ~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 154 CRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 00000 1 113345679999999999999999999999885
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-20 Score=146.70 Aligned_cols=182 Identities=13% Similarity=0.101 Sum_probs=127.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..++..|.. +|.++++|+||++.+..+ .....++...++.
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~a~~ 144 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKP----------------------PGFSYTMETWAEL 144 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCC----------------------CCccccHHHHHHH
Confidence 47899999999999999999988864 799999999988654211 0012344555666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCc-----ch------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFN-----AS------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~-----~~------------------ 174 (251)
+.++++. . ..+++.|+|||+||.+++.++.. +|++++++|++++..... ..
T Consensus 145 l~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (360)
T PLN02679 145 ILDFLEE---V--VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLK 219 (360)
T ss_pred HHHHHHH---h--cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhh
Confidence 6666663 2 34689999999999999988874 799999999887532100 00
Q ss_pred -------hhhh------h---------------------------------------c----------ccCCCCCEEEEc
Q 025550 175 -------LIDQ------F---------------------------------------T----------SDAKKTPILWSH 192 (251)
Q Consensus 175 -------~~~~------~---------------------------------------~----------~~~~~~p~l~~~ 192 (251)
.... + . ..++++|+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~ 299 (360)
T PLN02679 220 QRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLW 299 (360)
T ss_pred chhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEE
Confidence 0000 0 0 013678999999
Q ss_pred cCCCCcccchhc-ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 193 GMADRTVLFEAG-QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 193 g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
|++|..++.+.. ....+.+.+.-.+.++++++++||....+..+.+.+.|.++|..
T Consensus 300 G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 300 GDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred eCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 999999987632 12334454443457899999999998877777777666666653
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-20 Score=141.21 Aligned_cols=170 Identities=16% Similarity=0.161 Sum_probs=119.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+...|.+ .|.++++|+||++.+.. + +..+..+.++.
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~----------~--------------~~~~~~~~~~~ 67 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRG----------F--------------GALSLADMAEA 67 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCC----------C--------------CCCCHHHHHHH
Confidence 35699999999999999999998874 59999999998765320 0 01122222222
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------h
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------S 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------~ 174 (251)
+. .. ..+++.++|||+||.+++.+|.++|+++++++++++...... .
T Consensus 68 l~-------~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PRK10349 68 VL-------QQ--APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQR 138 (256)
T ss_pred HH-------hc--CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHH
Confidence 22 12 346899999999999999999999999999998866311000 0
Q ss_pred hhhh------h-----------------------------------------cccCCCCCEEEEccCCCCcccchhcccc
Q 025550 175 LIDQ------F-----------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 175 ~~~~------~-----------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
.... . ...++++|+++++|++|.+++.+.++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 218 (256)
T PRK10349 139 TVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML 218 (256)
T ss_pred HHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHH
Confidence 0000 0 0013789999999999999987755444
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
.+.+ ...++++++++||....+..+.+.+-+.++-
T Consensus 219 ~~~i----~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~ 253 (256)
T PRK10349 219 DKLW----PHSESYIFAKAAHAPFISHPAEFCHLLVALK 253 (256)
T ss_pred HHhC----CCCeEEEeCCCCCCccccCHHHHHHHHHHHh
Confidence 4443 3468999999999998887777776665553
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=137.76 Aligned_cols=175 Identities=19% Similarity=0.318 Sum_probs=124.3
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH-
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN- 118 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~- 118 (251)
|+||++||++++...|..+++.|. .|+.++.+|+|+++.+..+. .....+..+.+++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~---------------------~~~~~~~~~~~~~~ 59 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPD---------------------EIERYDFEEAAQDI 59 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC---------------------ccChhhHHHHHHHH
Confidence 789999999999999999999998 89999999999875532110 1123445555555
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------ 174 (251)
+..+++ . .+.+++.++|||+||.+++.++.++|+.+++++++++.......
T Consensus 60 ~~~~~~---~--~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T TIGR03695 60 LATLLD---Q--LGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEA 134 (251)
T ss_pred HHHHHH---H--cCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccH
Confidence 444333 2 24578999999999999999999999999999988764321100
Q ss_pred ----------------hhhhh---------------------------------cccCCCCCEEEEccCCCCcccchhcc
Q 025550 175 ----------------LIDQF---------------------------------TSDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 175 ----------------~~~~~---------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
..... .....++|+++++|++|..++ +
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~--- 210 (251)
T TIGR03695 135 FLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q--- 210 (251)
T ss_pred HHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H---
Confidence 00000 002367999999999998653 2
Q ss_pred cchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 206 AGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
..+.+.+.....+++.++++||....+..+.+.+.+.+++
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 211 -IAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred -HHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 2344555445678999999999988777777777777665
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-20 Score=140.38 Aligned_cols=169 Identities=15% Similarity=0.159 Sum_probs=120.5
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++||++++...|..+++.|. .++.++.+|+|+.+.+.. ....++.+.++.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~------------------------~~~~~~~~~~~~ 58 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRG------------------------FGPLSLADAAEA 58 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCC------------------------CCCcCHHHHHHH
Confidence 3689999999999999999998886 569999999998755310 011223333333
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----c-h----------------hh
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----A-S----------------LI 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----~-~----------------~~ 176 (251)
+... ..+++.++|||+||.+++.++.++|+.+++++++++..... . . ..
T Consensus 59 ~~~~---------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (245)
T TIGR01738 59 IAAQ---------APDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQ 129 (245)
T ss_pred HHHh---------CCCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHH
Confidence 3221 12589999999999999999999999999999886532110 0 0 00
Q ss_pred ---hh----------------------------------------h-------cccCCCCCEEEEccCCCCcccchhccc
Q 025550 177 ---DQ----------------------------------------F-------TSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 177 ---~~----------------------------------------~-------~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
.. + ...++++|+++++|++|..++.+..+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~ 209 (245)
T TIGR01738 130 RTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY 209 (245)
T ss_pred HHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH
Confidence 00 0 002478999999999999999886655
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
+.+.+. .++++.++++||....+..+.+.+-+.++
T Consensus 210 ~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 210 LDKLAP----HSELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred HHHhCC----CCeEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 554443 46889999999998877777777766655
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=135.62 Aligned_cols=184 Identities=16% Similarity=0.169 Sum_probs=124.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.....+|++||+|.....|..-.+.|+. .+.++++|.|+.+.+ .+.-|+... .....
T Consensus 86 ~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~S---------SRP~F~~d~-------~~~e~---- 144 (365)
T KOG4409|consen 86 ESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRS---------SRPKFSIDP-------TTAEK---- 144 (365)
T ss_pred cccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCC---------CCCCCCCCc-------ccchH----
Confidence 336677899999999877776665555654 889999999976543 232222221 11111
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-h--------h-----
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-Q--------F----- 179 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-~--------~----- 179 (251)
+..+-++.+. ..++ +++.|+|||+||+++..+|++||++++.+|+++|+.-......+ . +
T Consensus 145 ---~fvesiE~WR~~~~L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~ 219 (365)
T KOG4409|consen 145 ---EFVESIEQWRKKMGL--EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFL 219 (365)
T ss_pred ---HHHHHHHHHHHHcCC--cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhh
Confidence 3333333332 4444 58999999999999999999999999999999997654422000 0 0
Q ss_pred -----c-------------------------------------------------------------------------c
Q 025550 180 -----T-------------------------------------------------------------------------S 181 (251)
Q Consensus 180 -----~-------------------------------------------------------------------------~ 181 (251)
+ .
T Consensus 220 ~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~ 299 (365)
T KOG4409|consen 220 VATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRE 299 (365)
T ss_pred hhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHh
Confidence 0 0
Q ss_pred cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 182 ~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
-+..+|+++++|++|-+ +...+....+.+. ...++.+++|++||.+..+..+.+.+-+.+.++
T Consensus 300 l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~--~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 300 LKKDVPVTFIYGDRDWM-DKNAGLEVTKSLM--KEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred hccCCCEEEEecCcccc-cchhHHHHHHHhh--cccceEEEecCCCceeecCCHHHHHHHHHHHHh
Confidence 03569999999999964 4455555555542 235899999999999987777776666666554
|
|
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=141.52 Aligned_cols=176 Identities=15% Similarity=0.119 Sum_probs=122.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+++.|.+.+ .++++|+||++.+..+ ....+....+++
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~-----------------------~~~~~~~~~a~d 82 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKP-----------------------DIDYTFADHARY 82 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCC-----------------------CCCCCHHHHHHH
Confidence 3689999999999999999999888765 9999999988664211 111345555667
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC------cch------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF------NAS------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~------~~~------------------ 174 (251)
+..+++. . +.+++.++|||+||.+++.++.++|+++++++++++.... ...
T Consensus 83 l~~ll~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (295)
T PRK03592 83 LDAWFDA---L--GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMV 157 (295)
T ss_pred HHHHHHH---h--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccc
Confidence 7777663 2 3468999999999999999999999999999998863210 000
Q ss_pred -----hhh----h-------------h-----c---------------------------------ccCCCCCEEEEccC
Q 025550 175 -----LID----Q-------------F-----T---------------------------------SDAKKTPILWSHGM 194 (251)
Q Consensus 175 -----~~~----~-------------~-----~---------------------------------~~~~~~p~l~~~g~ 194 (251)
... . + . ...+++|+++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~ 237 (295)
T PRK03592 158 LEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAE 237 (295)
T ss_pred cchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEecc
Confidence 000 0 0 0 01258899999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+|..++......+...+.. ..++++++++||....+..+.+.+-|.+++
T Consensus 238 ~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 238 PGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred CCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 9999955544333333222 368889999999987666555554444444
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=135.56 Aligned_cols=168 Identities=15% Similarity=0.217 Sum_probs=119.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.++ +|.++.+|+||++.+.. ....++.+.+++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~------------------------~~~~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAA------------------------ISVDGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCC------------------------ccccCHHHHHHH
Confidence 3679999999999999999999873 69999999998765310 011245666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEeccCCCCcch------------hh---------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSGWVPFNAS------------LI--------- 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~~~~~~~~------------~~--------- 176 (251)
+.++++. . +.+++.++||||||.+++.++.++|+. +++++++++....... +.
T Consensus 56 l~~~l~~---~--~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (242)
T PRK11126 56 LSQTLQS---Y--NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLE 130 (242)
T ss_pred HHHHHHH---c--CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHH
Confidence 7777763 3 356899999999999999999998654 9999987654321100 00
Q ss_pred ----------------h--------hh-------------------------cccCCCCCEEEEccCCCCcccchhcccc
Q 025550 177 ----------------D--------QF-------------------------TSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 177 ----------------~--------~~-------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
. .. ...+.++|+++++|++|..+. .+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~ 205 (242)
T PRK11126 131 QVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----AL 205 (242)
T ss_pred HHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HH
Confidence 0 00 001368899999999998542 11
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. ...+++.++++||.+..+..+.+.+.|.++++
T Consensus 206 ~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 206 AQQ-----LALPLHVIPNAGHNAHRENPAAFAASLAQILR 240 (242)
T ss_pred HHH-----hcCeEEEeCCCCCchhhhChHHHHHHHHHHHh
Confidence 221 14689999999999988777777777776664
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.2e-19 Score=151.23 Aligned_cols=215 Identities=11% Similarity=0.084 Sum_probs=151.4
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC--CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..+.++..+..+++.++... .+.+.|+||++||+.+.. ..|......|.++|+.++...++|.+. -
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~---~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g---------~ 488 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHF---RKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGE---------L 488 (686)
T ss_pred EECCCCCEEEEEEEEECCCC---CCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCc---------c
Confidence 34567777777666543222 234669999999966544 346566667888999999999997633 2
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
++.|...... ..+..+..|+.+++++|.+ +.-+++++++++|.|.||.++..++.++|+.++++|+..|..
T Consensus 489 G~~w~~~g~~---~~k~~~~~D~~a~~~~Lv~------~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 489 GQQWYEDGKF---LKKKNTFNDYLDACDALLK------LGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred CHHHHHhhhh---hcCCCcHHHHHHHHHHHHH------cCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 3566553221 1223445555555554432 444689999999999999999999999999999999998866
Q ss_pred CCcchhh--------------------------hhhc----ccCCCCC-EEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 170 PFNASLI--------------------------DQFT----SDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 170 ~~~~~~~--------------------------~~~~----~~~~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
+....+. ..++ ..+.+.| +|+++|.+|..|++.++.+++.+|++.+.+.
T Consensus 560 D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~ 639 (686)
T PRK10115 560 DVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDD 639 (686)
T ss_pred hHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCC
Confidence 5332100 0001 1235678 6778999999999999999999999999988
Q ss_pred EEEEe---CCCCCCCC------HHHHHHHHHHHHHhhc
Q 025550 219 EFKAY---PGLGHSIS------NEELRNLESWIKTRMS 247 (251)
Q Consensus 219 ~~~~~---~g~~H~~~------~~~~~~~~~~l~~~l~ 247 (251)
+++++ ++.||... .++......|+...+.
T Consensus 640 ~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 640 HLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred ceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhC
Confidence 88888 99999853 2234566778777765
|
|
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-19 Score=136.64 Aligned_cols=181 Identities=14% Similarity=0.129 Sum_probs=130.1
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+++.|.|||+||++.+...|..++..|.+.||.++.+|+|+++.+... .....++.+.
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~----------------------~~~~~~~~~~ 72 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSD----------------------ADSVTTFDEY 72 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCC----------------------cccCCCHHHH
Confidence 345689999999999999999999999888999999999987542100 1111344455
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---------------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---------------------- 173 (251)
++.+.+.++. .. ..++++|+||||||.++..++.++|+.++++|.+++......
T Consensus 73 ~~~l~~~i~~---l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 148 (273)
T PLN02211 73 NKPLIDFLSS---LP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYE 148 (273)
T ss_pred HHHHHHHHHh---cC-CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhcccee
Confidence 5666666663 22 246899999999999999999999999999998866432000
Q ss_pred ------------h--h----hhh-------------------------hcc-------cCC-CCCEEEEccCCCCcccch
Q 025550 174 ------------S--L----IDQ-------------------------FTS-------DAK-KTPILWSHGMADRTVLFE 202 (251)
Q Consensus 174 ------------~--~----~~~-------------------------~~~-------~~~-~~p~l~~~g~~D~~~~~~ 202 (251)
. . ... +.. ... .+|++++.|++|..+|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 149 LGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred eeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHH
Confidence 0 0 000 000 012 679999999999999998
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+.+.+.+.. .+++.++ +||....+..+.+.+.|.+..+
T Consensus 229 ~~~~m~~~~~~----~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 229 QQEAMIKRWPP----SQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred HHHHHHHhCCc----cEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 77666665543 3677787 6999988888888888877654
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.4e-19 Score=142.62 Aligned_cols=176 Identities=18% Similarity=0.199 Sum_probs=127.4
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.+.|||+||++++...|..+.+.|.. +|.++.+|+|+++.+.. .....++.+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~-----------------------~~~~~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSK-----------------------AVGAGSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCC-----------------------CCCCCCHHHHH
Confidence 3457899999999999999998888865 49999999998765310 01123344555
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc---h-------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---S------------------- 174 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---~------------------- 174 (251)
+.+..+++ . ++.++++++|||+||.+++.++..+|+.+++++++++...... .
T Consensus 185 ~~~~~~~~---~--~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (371)
T PRK14875 185 AAVLAFLD---A--LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLE 259 (371)
T ss_pred HHHHHHHH---h--cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHH
Confidence 55655555 2 3456899999999999999999999999999998876421100 0
Q ss_pred --------hhhh-------------------------h-----------cccCCCCCEEEEccCCCCcccchhcccchHH
Q 025550 175 --------LIDQ-------------------------F-----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPF 210 (251)
Q Consensus 175 --------~~~~-------------------------~-----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~ 210 (251)
.... + ...+.++|+++++|++|..++.+.++.+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~-- 337 (371)
T PRK14875 260 LLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP-- 337 (371)
T ss_pred HHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc--
Confidence 0000 0 01247899999999999999877554332
Q ss_pred HHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 211 LEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 211 l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
..+++..++++||....+..+.+.+.|.+++++
T Consensus 338 -----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 338 -----DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred -----CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 246888999999999888888888888887753
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-19 Score=127.97 Aligned_cols=181 Identities=17% Similarity=0.158 Sum_probs=126.1
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
...++++++||-..+......+...+ ..-++.++.+||.|.+.+.... . .....+|+..+
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~p-----s--------------E~n~y~Di~av 118 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKP-----S--------------ERNLYADIKAV 118 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCc-----c--------------cccchhhHHHH
Confidence 35689999999754433221222222 2248899999999776542110 0 01123344444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------------hhccc
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-------------QFTSD 182 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-------------~~~~~ 182 (251)
.++|+. +.+ ..++|+|+|+|+|...++.+|++.| ++|+|+.+|.........+ .-...
T Consensus 119 ye~Lr~------~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~ 189 (258)
T KOG1552|consen 119 YEWLRN------RYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKIS 189 (258)
T ss_pred HHHHHh------hcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceEEeeccccccCcce
Confidence 444433 566 6789999999999999999999998 9999999997754332222 11123
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC---CHHHHHHHHHHHHHhhcC
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI---SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~---~~~~~~~~~~~l~~~l~~ 248 (251)
.+++|++++||++|++++..++.++++..++ +++.....|+||.- ..+.++.+.+|+....+.
T Consensus 190 ~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 190 KITCPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred eccCCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcccccCHHHHHHHHHHHHHhccc
Confidence 4889999999999999999999999999987 46777888999964 356678888888776553
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=145.00 Aligned_cols=181 Identities=14% Similarity=0.130 Sum_probs=124.9
Q ss_pred CccEEEEEecCCCCCCCchh-hhhhhc---CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGDSGPANEP-IKTLFT---SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~-~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..|.|||+||++++...|.. +...+. +.+|.++.+|+||++.++.+. ....++.
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~----------------------~~~ytl~ 257 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA----------------------DSLYTLR 257 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC----------------------CCcCCHH
Confidence 35789999999999888875 334443 478999999999876542110 0112334
Q ss_pred HHHHHHH-HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------------------
Q 025550 114 KAVRNVH-AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------- 173 (251)
Q Consensus 114 ~~~~~l~-~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------- 173 (251)
+.++.+. .+++ .. +.+++.++||||||.+++.++.++|+++++++++++......
T Consensus 258 ~~a~~l~~~ll~---~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (481)
T PLN03087 258 EHLEMIERSVLE---RY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVW 332 (481)
T ss_pred HHHHHHHHHHHH---Hc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccC
Confidence 4444552 3444 22 456899999999999999999999999999999875221000
Q ss_pred -----------------hh-----------hhh-------------h-----------c---------------c-----
Q 025550 174 -----------------SL-----------IDQ-------------F-----------T---------------S----- 181 (251)
Q Consensus 174 -----------------~~-----------~~~-------------~-----------~---------------~----- 181 (251)
.. ... . . .
T Consensus 333 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~ 412 (481)
T PLN03087 333 PPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH 412 (481)
T ss_pred CccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH
Confidence 00 000 0 0 0
Q ss_pred --cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-HHHHHHHHHHHHhhcCC
Q 025550 182 --DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-EELRNLESWIKTRMSCS 249 (251)
Q Consensus 182 --~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~~~ 249 (251)
..+++|+++++|++|..+|++.++.+.+.+. ..++++++++||.... +..+.+.+.|.++....
T Consensus 413 l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 0367999999999999999997766666553 3689999999999663 66677777777766543
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.4e-19 Score=136.97 Aligned_cols=177 Identities=14% Similarity=0.124 Sum_probs=122.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++.+...|..+.+.|. .+|.++++|+|+.+.+..+. ....+.....+.
T Consensus 34 ~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~----------------------~~~~~~~~~~~~ 90 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPS----------------------GFGYQIDEHARV 90 (286)
T ss_pred CCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCC----------------------ccccCHHHHHHH
Confidence 4789999999988778888888886 46999999999876542110 001223344445
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------ 174 (251)
+.++++ .. +.+++.++|||+||.++..++..+|++++++|++++.......
T Consensus 91 ~~~~~~---~~--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (286)
T PRK03204 91 IGEFVD---HL--GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNF 165 (286)
T ss_pred HHHHHH---Hh--CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhH
Confidence 555444 22 3468999999999999999999999999999977653210000
Q ss_pred hhh---------hhc----------------------------c-----c---------CCCCCEEEEccCCCCcccchh
Q 025550 175 LID---------QFT----------------------------S-----D---------AKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 175 ~~~---------~~~----------------------------~-----~---------~~~~p~l~~~g~~D~~~~~~~ 203 (251)
... ... . . ..++|+++++|++|..+++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~ 245 (286)
T PRK03204 166 FVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKT 245 (286)
T ss_pred HHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHH
Confidence 000 000 0 0 017999999999999876542
Q ss_pred -cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 204 -GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 204 -~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+.+ ...++++++++||....+..+++.+.|.++|.
T Consensus 246 ~~~~~~~~i----p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 246 ILPRLRATF----PDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred HHHHHHHhc----CCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 33333333 34689999999999998888888888887763
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=138.15 Aligned_cols=200 Identities=17% Similarity=0.276 Sum_probs=127.8
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC-C---------------------c----hhhhhhhcCCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP-A---------------------N----EPIKTLFTSPEFK 68 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~-~---------------------~----~~~~~~~~~~g~~ 68 (251)
.++..+..|.+.+ ..++.+|+++||++++.. . | ..+++.|++.||.
T Consensus 5 ~~g~~l~~~~~~~--------~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 5 KDGLLLKTYSWIV--------KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred CCCCeEEEeeeec--------cCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 4566677666652 145689999999998775 1 1 3578899999999
Q ss_pred eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHc------------------C
Q 025550 69 LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA------------------G 130 (251)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~------------------~ 130 (251)
++.+|.||++.+...... .....+..+.++++..+++...+. .
T Consensus 77 V~~~D~rGHG~S~~~~~~-------------------~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNL-------------------RGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNT 137 (332)
T ss_pred EEEecccccCCCcccccc-------------------ccchhhHHHHHHHHHHHHHHhhhhhcccccccccccccccccc
Confidence 999999988764211000 001134445555555555543220 1
Q ss_pred CC-CCcEEEEEeChhHHHHHHHHHhcCC--------CcceEEEeccCCCCcc---------h-----hh-----------
Q 025550 131 ID-PNNVFVCGFSQGGALTLASVLLYPR--------KLGGGAIFSGWVPFNA---------S-----LI----------- 176 (251)
Q Consensus 131 ~~-~~~i~l~G~S~Gg~~a~~~a~~~p~--------~~~~~i~~~~~~~~~~---------~-----~~----------- 176 (251)
.. ..+++|+||||||.++..++..++. .++|+|+.+|.+.... . +.
T Consensus 138 ~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 217 (332)
T TIGR01607 138 KENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFR 217 (332)
T ss_pred ccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCccc
Confidence 11 3579999999999999988866532 5888887777531100 0 00
Q ss_pred --h--hhc--------------------------------------ccCC--CCCEEEEccCCCCcccchhcccchHHHH
Q 025550 177 --D--QFT--------------------------------------SDAK--KTPILWSHGMADRTVLFEAGQAGPPFLE 212 (251)
Q Consensus 177 --~--~~~--------------------------------------~~~~--~~p~l~~~g~~D~~~~~~~~~~~~~~l~ 212 (251)
. .+. .... ++|+++++|++|.+++++.++.+++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~ 297 (332)
T TIGR01607 218 ISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS 297 (332)
T ss_pred ccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc
Confidence 0 000 0112 6899999999999999887766655543
Q ss_pred hcCCeeEEEEeCCCCCCCCHH-----HHHHHHHHHH
Q 025550 213 QAGISCEFKAYPGLGHSISNE-----ELRNLESWIK 243 (251)
Q Consensus 213 ~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~ 243 (251)
. .+++++++++++|....+ ..+.+.+||.
T Consensus 298 ~--~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 298 I--SNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred C--CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 3 247888999999988644 2455555553
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=134.64 Aligned_cols=183 Identities=19% Similarity=0.228 Sum_probs=128.3
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+...+.||++||++++...|+.+...+... |+.++++|++|.+.. ++.+ .....++.+
T Consensus 55 ~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~-----------s~~~----------~~~~y~~~~ 113 (326)
T KOG1454|consen 55 DKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYS-----------SPLP----------RGPLYTLRE 113 (326)
T ss_pred CCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcC-----------CCCC----------CCCceehhH
Confidence 357899999999999999999988866654 599999999975421 1100 112244555
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE---EeccCCCCcchh----------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA---IFSGWVPFNASL---------------- 175 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i---~~~~~~~~~~~~---------------- 175 (251)
.+..+..... ... .+++.++|||+||.+++.+|..+|+.+++++ .+++.....+..
T Consensus 114 ~v~~i~~~~~---~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (326)
T KOG1454|consen 114 LVELIRRFVK---EVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALE 188 (326)
T ss_pred HHHHHHHHHH---hhc--CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhh
Confidence 5555555555 222 3459999999999999999999999999999 444422110000
Q ss_pred ----------------------------------------hh--------h------------------hcccCCCCCEE
Q 025550 176 ----------------------------------------ID--------Q------------------FTSDAKKTPIL 189 (251)
Q Consensus 176 ----------------------------------------~~--------~------------------~~~~~~~~p~l 189 (251)
.. . ......++|++
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvl 268 (326)
T KOG1454|consen 189 LLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVL 268 (326)
T ss_pred hcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceE
Confidence 00 0 00012459999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
+++|+.|..+|.+.++.+.+++ ..+++++++++||....+..+.+.+.|..++++
T Consensus 269 ii~G~~D~~~p~~~~~~~~~~~----pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 269 IIWGDKDQIVPLELAEELKKKL----PNAELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred EEEcCcCCccCHHHHHHHHhhC----CCceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 9999999999999555554444 457999999999999887777777777777654
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=139.75 Aligned_cols=174 Identities=17% Similarity=0.157 Sum_probs=122.9
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.||++||++++...|..+.+.|. .+|.++.+|+||++.+.. +....+.....+++
T Consensus 87 ~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~-----------------------~~~~~~~~~~a~~l 142 (354)
T PLN02578 87 LPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDK-----------------------ALIEYDAMVWRDQV 142 (354)
T ss_pred CeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCC-----------------------cccccCHHHHHHHH
Confidence 568999999999999998888886 569999999998765311 11112333345566
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc----------------------chh--
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN----------------------ASL-- 175 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~----------------------~~~-- 175 (251)
.++++.+ ..++++++|||+||.+++.+|.++|+.+++++++++..... ...
T Consensus 143 ~~~i~~~-----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (354)
T PLN02578 143 ADFVKEV-----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKE 217 (354)
T ss_pred HHHHHHh-----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHH
Confidence 6666532 24689999999999999999999999999999876522100 000
Q ss_pred -------------------------------------------------------hh---h-h---c-------ccCCCC
Q 025550 176 -------------------------------------------------------ID---Q-F---T-------SDAKKT 186 (251)
Q Consensus 176 -------------------------------------------------------~~---~-~---~-------~~~~~~ 186 (251)
.. . + . ..+.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 297 (354)
T PLN02578 218 WFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSC 297 (354)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCC
Confidence 00 0 0 0 013689
Q ss_pred CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 187 PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 187 p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
|+++++|++|..++.+.++.+.+.+. +.++++++ +||....+..+++.+-|.+++.
T Consensus 298 PvLiI~G~~D~~v~~~~~~~l~~~~p----~a~l~~i~-~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 298 PLLLLWGDLDPWVGPAKAEKIKAFYP----DTTLVNLQ-AGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCC----CCEEEEeC-CCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999887666555543 34677775 7999988887777777777664
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=131.52 Aligned_cols=184 Identities=17% Similarity=0.249 Sum_probs=135.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+....|+|+++||+..+..+|+.+...|+..||+++++|++|.+.+..+ .......+..
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P---------------------~~~~~Yt~~~ 98 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAP---------------------PHISEYTIDE 98 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCC---------------------CCcceeeHHH
Confidence 5567799999999999999999999999999999999999976553211 1224566777
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--hh-----------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--SL----------------- 175 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~~----------------- 175 (251)
.+.++..+++. .+ .+++.++||++|+.+|+.++..+|+++.+++.++....... ..
T Consensus 99 l~~di~~lld~---Lg--~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ 173 (322)
T KOG4178|consen 99 LVGDIVALLDH---LG--LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQ 173 (322)
T ss_pred HHHHHHHHHHH---hc--cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEecc
Confidence 78888888884 33 67999999999999999999999999999998876333000 00
Q ss_pred -------------------------------hh-----------------------------------h---------hc
Q 025550 176 -------------------------------ID-----------------------------------Q---------FT 180 (251)
Q Consensus 176 -------------------------------~~-----------------------------------~---------~~ 180 (251)
.. . ..
T Consensus 174 ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~ 253 (322)
T KOG4178|consen 174 EPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWA 253 (322)
T ss_pred ccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccc
Confidence 00 0 00
Q ss_pred ccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 181 SDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
...+..|+++++|+.|.+.+.. ....+.+.+.. ..+.++++|+||+...+..+++.+.+.++++
T Consensus 254 ~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~---l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~ 318 (322)
T KOG4178|consen 254 LAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR---LTERVVIEGIGHFVQQEKPQEVNQAILGFIN 318 (322)
T ss_pred ccccccceEEEEecCcccccchhHHHHHHHhhcc---ccceEEecCCcccccccCHHHHHHHHHHHHH
Confidence 1136789999999999998876 22222222222 2468889999999998877777766666664
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-18 Score=132.78 Aligned_cols=216 Identities=16% Similarity=0.175 Sum_probs=132.8
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC--CCcCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY--GAVMPS 92 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--g~~~~~ 92 (251)
.++..+..|+..|. ....+.|+||.+||+++....+.... .++..|+.++.+|.+|.+........ +.....
T Consensus 64 ~~g~~V~g~l~~P~-----~~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 64 FDGSRVYGWLYRPK-----NAKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp GGGEEEEEEEEEES------SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred cCCCEEEEEEEecC-----CCCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 35666777666532 23578899999999998866665543 36679999999999987732211111 111111
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
|. .... ....+..-+...+.++...++.+. ...+|.++|++.|.|+||.+++.+|...+ ++++++...|++..
T Consensus 138 ~~-~~g~----~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d 211 (320)
T PF05448_consen 138 HI-TRGI----DDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD 211 (320)
T ss_dssp ST-TTTT----TS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS
T ss_pred HH-hcCc----cCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc
Confidence 11 1111 001233334445555555666555 56788999999999999999999999887 59999888886643
Q ss_pred cchhh-------------hhhc------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 172 NASLI-------------DQFT------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 172 ~~~~~-------------~~~~------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
..... ..+. ...+++|+++..|-.|.++|+...-+.++.+..
T Consensus 212 ~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~- 290 (320)
T PF05448_consen 212 FRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG- 290 (320)
T ss_dssp HHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-
T ss_pred hhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-
Confidence 22110 0000 235899999999999999999987777777755
Q ss_pred CCeeEEEEeCCCCCCCCHHH-HHHHHHHHHHh
Q 025550 215 GISCEFKAYPGLGHSISNEE-LRNLESWIKTR 245 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~ 245 (251)
++++.+||..+|....+. .++..+||.++
T Consensus 291 --~K~l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 291 --PKELVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp --SEEEEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred --CeeEEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 689999999999998877 88899999874
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=137.46 Aligned_cols=180 Identities=13% Similarity=0.112 Sum_probs=131.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++.+...|+.++..|. .+|.++++|+|+++.+..+... .....++.+.++
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~-------------------~~~~ys~~~~a~ 185 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPG-------------------YGFNYTLDEYVS 185 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCccc-------------------ccccCCHHHHHH
Confidence 45789999999999999999998886 4799999999988654211000 001235566677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----ch-----------------h
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----AS-----------------L 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----~~-----------------~ 175 (251)
++..+++. .+ .+++.|+|||+||.+++.++.++|++++++|++++..... .. .
T Consensus 186 ~l~~~i~~---l~--~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~ 260 (383)
T PLN03084 186 SLESLIDE---LK--SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPL 260 (383)
T ss_pred HHHHHHHH---hC--CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchH
Confidence 77777773 33 4589999999999999999999999999999998753210 00 0
Q ss_pred h----------------------------------------hhhcc---------------cCCCCCEEEEccCCCCccc
Q 025550 176 I----------------------------------------DQFTS---------------DAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 176 ~----------------------------------------~~~~~---------------~~~~~p~l~~~g~~D~~~~ 200 (251)
. ..+.. ..+++|+++++|+.|..++
T Consensus 261 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~ 340 (383)
T PLN03084 261 RASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLN 340 (383)
T ss_pred HHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcC
Confidence 0 00000 1247899999999999988
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.++.+.+.. +.++++++++||....+..+++.+.|.++++
T Consensus 341 ~~~~~~~a~~~-----~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 341 YDGVEDFCKSS-----QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHHHhc-----CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 87554444432 4588999999999998888888888887764
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-18 Score=133.02 Aligned_cols=179 Identities=16% Similarity=0.155 Sum_probs=118.2
Q ss_pred CccEEEEEecCCCCCCC-chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
+.+.||++||+.++... |..+...+.+.||.++.+|+|+++.+.... ......++...+
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~--------------------~~~~~~~~~~~~ 83 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPD--------------------DSDELWTIDYFV 83 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC--------------------cccccccHHHHH
Confidence 35789999997665544 445666676669999999999876532100 000013344555
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch----------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS---------------------- 174 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~---------------------- 174 (251)
+++..+++ .. +.++++++|||+||.+++.++..+|+.+++++++++.......
T Consensus 84 ~~~~~~~~---~~--~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (288)
T TIGR01250 84 DELEEVRE---KL--GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRC 158 (288)
T ss_pred HHHHHHHH---Hc--CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHH
Confidence 55555555 22 3457999999999999999999999999999987763221000
Q ss_pred -------------hhhh-h------------------------------------------------cccCCCCCEEEEc
Q 025550 175 -------------LIDQ-F------------------------------------------------TSDAKKTPILWSH 192 (251)
Q Consensus 175 -------------~~~~-~------------------------------------------------~~~~~~~p~l~~~ 192 (251)
.... . ...++++|+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 238 (288)
T TIGR01250 159 EASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTV 238 (288)
T ss_pred HhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEe
Confidence 0000 0 0013679999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|++|.. +++..+.+.+.+. ..++++++++||....+..+++.+-+.+++
T Consensus 239 G~~D~~-~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 239 GEFDTM-TPEAAREMQELIA----GSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred cCCCcc-CHHHHHHHHHhcc----CCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 999985 4555444444332 357889999999988777777776666655
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=124.79 Aligned_cols=155 Identities=14% Similarity=0.181 Sum_probs=106.7
Q ss_pred cEEEEEecCCCCCCCchh--hhhhhcC--CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 40 NFILWLHGLGDSGPANEP--IKTLFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
|.||++||++++...|.. +.+.+.+ .++.++.+|+|+.+ .+.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------------------------------~~~ 47 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------------------------------ADA 47 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------------------------------HHH
Confidence 679999999999998884 4556644 37888888887431 123
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------------- 176 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------------- 176 (251)
.+.+.++++ +. +.++++++|+|+||.+++.++.++|. + ++++++.........
T Consensus 48 ~~~l~~l~~---~~--~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (190)
T PRK11071 48 AELLESLVL---EH--GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLES 119 (190)
T ss_pred HHHHHHHHH---Hc--CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcH
Confidence 445555554 33 34689999999999999999999983 3 466766544211000
Q ss_pred ---hh---h--cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH--HHHHHHHHHHH
Q 025550 177 ---DQ---F--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--EELRNLESWIK 243 (251)
Q Consensus 177 ---~~---~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--~~~~~~~~~l~ 243 (251)
.. + .......|+++++|++|+++|++.+.++++. ++.++++|++|.+.. +..+.+.+|+.
T Consensus 120 ~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 120 RHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 00 0 0112567889999999999999988777773 256678999999864 33566777753
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.6e-18 Score=124.52 Aligned_cols=199 Identities=19% Similarity=0.275 Sum_probs=126.8
Q ss_pred EEecCCCCCCCCCCCCCc-cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCC
Q 025550 22 LFFWPSSSYSHEQNPMAR-NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP 100 (251)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~-~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~ 100 (251)
.|.+..|..+ .+++++ |+|+|+||.|..+.+.... ...|...++++.|.-+- + .--++|-...+.
T Consensus 175 kYrly~Pkdy--~pdkky~PLvlfLHgagq~g~dn~~~----l~sg~gaiawa~pedqc--f-----VlAPQy~~if~d- 240 (387)
T COG4099 175 KYRLYTPKDY--APDKKYYPLVLFLHGAGQGGSDNDKV----LSSGIGAIAWAGPEDQC--F-----VLAPQYNPIFAD- 240 (387)
T ss_pred eEEEeccccc--CCCCccccEEEEEecCCCCCchhhhh----hhcCccceeeecccCce--E-----EEcccccccccc-
Confidence 3444444444 355566 9999999999877765441 12344445555442210 0 000223221110
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc
Q 025550 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT 180 (251)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~ 180 (251)
.......-....++.+.+.+.. ++++|.+||.++|.|+||..++.++.++|+.+++.+.++|..+-.. ..
T Consensus 241 ---~e~~t~~~l~~~idli~~vlas--~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~-----lv 310 (387)
T COG4099 241 ---SEEKTLLYLIEKIDLILEVLAS--TYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY-----LV 310 (387)
T ss_pred ---cccccchhHHHHHHHHHHHHhh--ccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh-----hh
Confidence 0011122223333333333332 7899999999999999999999999999999999999999765321 12
Q ss_pred ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC-------CCCCC-CC--HHHHHHHHHHHHH
Q 025550 181 SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP-------GLGHS-IS--NEELRNLESWIKT 244 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------g~~H~-~~--~~~~~~~~~~l~~ 244 (251)
....+.|++++|+.+|+++|.++++-+++++++.+.++++..|. |..|. .+ .-...++.+||-+
T Consensus 311 ~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 311 RTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred hhhccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhhhccccccccCCCCcceeecCCHHHHHHHHh
Confidence 23468999999999999999999999999999988877776665 22232 11 2234677788754
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.8e-18 Score=136.03 Aligned_cols=107 Identities=15% Similarity=0.076 Sum_probs=74.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH-HH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL-KA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~-~~ 115 (251)
...|.||++||++++...|......|.+ +|.++.+|+|+++.+... .+. ..+..+.. ..
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~---------~~~----------~~~~~~~~~~~ 162 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRP---------DFT----------CKSTEETEAWF 162 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCC---------Ccc----------cccHHHHHHHH
Confidence 4568999999999988888877777764 699999999987653110 000 00111111 12
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
++.+.++++ .. +.++++|+||||||.+++.++.++|+.++++|++++.
T Consensus 163 ~~~i~~~~~---~l--~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 163 IDSFEEWRK---AK--NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred HHHHHHHHH---Hc--CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 333333333 22 4468999999999999999999999999999988753
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=131.84 Aligned_cols=168 Identities=26% Similarity=0.346 Sum_probs=129.1
Q ss_pred CCCCccEEEEEecCCC---CCCCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLGD---SGPAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
...+.|+||++||+|. +.... ......+...|+.++.+|||.+|+.+. +....
T Consensus 75 ~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~-----------------------p~~~~ 131 (312)
T COG0657 75 AAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF-----------------------PAALE 131 (312)
T ss_pred CCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC-----------------------CchHH
Confidence 4456899999999884 33333 335567888999999999999887522 44567
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchh--h--------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASL--I-------- 176 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~--~-------- 176 (251)
++.+++.++.+... +.++|+++|+++|+|.||.+++.++....+ ...+.+.++++.+..... .
T Consensus 132 d~~~a~~~l~~~~~---~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~ 208 (312)
T COG0657 132 DAYAAYRWLRANAA---ELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADL 208 (312)
T ss_pred HHHHHHHHHHhhhH---hhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccc
Confidence 77777777777666 678899999999999999999988877543 478888899987655300 0
Q ss_pred -----------hh------------hcc---c--CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 177 -----------DQ------------FTS---D--AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 177 -----------~~------------~~~---~--~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
.. ..+ . ..-.|+++++|+.|.+.+ +++.+.++|++.|++++++.++|+.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H 286 (312)
T COG0657 209 LDAAAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIH 286 (312)
T ss_pred cCHHHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcce
Confidence 00 000 0 115789999999999977 77899999999999999999999999
Q ss_pred CC
Q 025550 229 SI 230 (251)
Q Consensus 229 ~~ 230 (251)
.+
T Consensus 287 ~f 288 (312)
T COG0657 287 GF 288 (312)
T ss_pred ec
Confidence 87
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.3e-17 Score=125.33 Aligned_cols=198 Identities=13% Similarity=0.086 Sum_probs=119.0
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC----CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS----GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..++..+..++..| .+.+.+.||++||++.. ...+..+++.|+++||.++.+|+++++.+...
T Consensus 8 ~~~~~~l~g~~~~p-------~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~------ 74 (274)
T TIGR03100 8 SCEGETLVGVLHIP-------GASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE------ 74 (274)
T ss_pred EcCCcEEEEEEEcC-------CCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC------
Confidence 34556666666652 22234567777775532 22345578899999999999999988664210
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
. .......+++.+.++.+.+.....++++++|||+||.+++.++.. +..++++|+++++.
T Consensus 75 ----------------~---~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 75 ----------------N---LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred ----------------C---CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 0 112223344444444432221134679999999999999988765 45799999999975
Q ss_pred CCcch------------------hhhh---------------------h-cc-----------------cCCCCCEEEEc
Q 025550 170 PFNAS------------------LIDQ---------------------F-TS-----------------DAKKTPILWSH 192 (251)
Q Consensus 170 ~~~~~------------------~~~~---------------------~-~~-----------------~~~~~p~l~~~ 192 (251)
..... .... . .. ...++|+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~ 214 (274)
T TIGR03100 135 RTEAAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFIL 214 (274)
T ss_pred CCcccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEE
Confidence 42210 0000 0 00 13678999999
Q ss_pred cCCCCcccchh-----cccchHHHHhcCCeeEEEEeCCCCCCCCHH-HHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEA-----GQAGPPFLEQAGISCEFKAYPGLGHSISNE-ELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-~~~~~~~~l~~~l 246 (251)
|+.|...+.-. +..+.+.+.. ..+++..+++++|.++.+ ..+.+.+-|.++|
T Consensus 215 g~~D~~~~~~~~~~~~~~~~~~~l~~--~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL 272 (274)
T TIGR03100 215 SGNDLTAQEFADSVLGEPAWRGALED--PGIERVEIDGADHTFSDRVWREWVAARTTEWL 272 (274)
T ss_pred cCcchhHHHHHHHhccChhhHHHhhc--CCeEEEecCCCCcccccHHHHHHHHHHHHHHH
Confidence 99998753211 0222222221 357899999999988543 3344444444444
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-17 Score=130.05 Aligned_cols=177 Identities=18% Similarity=0.208 Sum_probs=118.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.||++||+.++... ..+...+...+|.++.+|+|+++.+.... ........+.+++
T Consensus 27 ~~~lvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~d 84 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTD-PGCRRFFDPETYRIVLFDQRGCGKSTPHA---------------------CLEENTTWDLVAD 84 (306)
T ss_pred CCEEEEECCCCCCCCC-HHHHhccCccCCEEEEECCCCCCCCCCCC---------------------CcccCCHHHHHHH
Confidence 4568999998776544 33444565678999999999876542110 0001123334455
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC---------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF--------------------------- 171 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~--------------------------- 171 (251)
+..+++ .. +.+++.++||||||.+++.++.++|+.++++|+++.....
T Consensus 85 l~~l~~---~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T TIGR01249 85 IEKLRE---KL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSI 159 (306)
T ss_pred HHHHHH---Hc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhC
Confidence 555444 22 3458999999999999999999999999988877542210
Q ss_pred --cchh-----------------------------hh------------------------hh----------cc-----
Q 025550 172 --NASL-----------------------------ID------------------------QF----------TS----- 181 (251)
Q Consensus 172 --~~~~-----------------------------~~------------------------~~----------~~----- 181 (251)
.... .. .+ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
T TIGR01249 160 PENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239 (306)
T ss_pred ChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHH
Confidence 0000 00 00 00
Q ss_pred ----cCC-CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhh
Q 025550 182 ----DAK-KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTRM 246 (251)
Q Consensus 182 ----~~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l 246 (251)
.+. ++|+++++|++|.++|.+.++.+.+.+. ..++++++++||... .+..+.+.+|+.++|
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 112 5899999999999999987766666553 358889999999876 456788999998765
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=133.16 Aligned_cols=185 Identities=13% Similarity=0.182 Sum_probs=118.6
Q ss_pred CCccEEEEEecCCCCCCC-c-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPA-N-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...|+||++||++++... | ..++..+.+.||.++++|+||++.++... ..++. ...
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~------~~~~~----------~~~------ 155 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT------PQFYS----------ASF------ 155 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC------cCEEc----------CCc------
Confidence 456899999999776544 4 34666667799999999999987653211 00100 011
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC--cceEEEeccCCCCc-------ch--------hh-
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK--LGGGAIFSGWVPFN-------AS--------LI- 176 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~i~~~~~~~~~-------~~--------~~- 176 (251)
.+++.++++.+.. ..+..+++++|||+||.+++.++.++|+. +.+++++++..... .. +.
T Consensus 156 -~~Dl~~~i~~l~~-~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~ 233 (388)
T PLN02511 156 -TGDLRQVVDHVAG-RYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAK 233 (388)
T ss_pred -hHHHHHHHHHHHH-HCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHH
Confidence 2333344433321 12346899999999999999999999876 77777776543210 00 00
Q ss_pred -------------h----hh---------------------------------------cccCCCCCEEEEccCCCCccc
Q 025550 177 -------------D----QF---------------------------------------TSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 177 -------------~----~~---------------------------------------~~~~~~~p~l~~~g~~D~~~~ 200 (251)
. .+ ...++++|+++++|++|++++
T Consensus 234 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p 313 (388)
T PLN02511 234 ALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAP 313 (388)
T ss_pred HHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCC
Confidence 0 00 001478999999999999998
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----------HHHHHHHHHHhhcC
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----------LRNLESWIKTRMSC 248 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----------~~~~~~~l~~~l~~ 248 (251)
.+... ..+.+.....++++++++||..+.+. .+.+.+||......
T Consensus 314 ~~~~~---~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 314 ARGIP---REDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred cccCc---HhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 76431 22223334588999999999755332 36677888776653
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=133.15 Aligned_cols=184 Identities=14% Similarity=0.116 Sum_probs=117.4
Q ss_pred ccEEEEEecCCCCCCCch--hhhhhh-------cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 39 RNFILWLHGLGDSGPANE--PIKTLF-------TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~--~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
.|.|||+||++++...|. .+.+.+ ...+|.++.+|+||++.+...... ..+ ....
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~----~~~------------~~~~ 132 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG----LRA------------AFPR 132 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC----CCC------------CCCc
Confidence 578999999999877775 444332 257899999999988764211100 000 0001
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc----------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVF-VCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN---------------- 172 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~---------------- 172 (251)
.++.+.++++...+.. .. +.+++. |+||||||.+++.++.++|++++++|++++.....
T Consensus 133 ~~~~~~a~~~~~~l~~--~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~ 208 (360)
T PRK06489 133 YDYDDMVEAQYRLVTE--GL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIR 208 (360)
T ss_pred ccHHHHHHHHHHHHHH--hc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHH
Confidence 2344445555443321 23 345664 89999999999999999999999999887532000
Q ss_pred --------c------h------hh--------------hh--------h-------c----------------------c
Q 025550 173 --------A------S------LI--------------DQ--------F-------T----------------------S 181 (251)
Q Consensus 173 --------~------~------~~--------------~~--------~-------~----------------------~ 181 (251)
. . .. .. + . .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L 288 (360)
T PRK06489 209 NDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDL 288 (360)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHH
Confidence 0 0 00 00 0 0 0
Q ss_pred cCCCCCEEEEccCCCCcccchhc--ccchHHHHhcCCeeEEEEeCCC----CCCCCHHHHHHHHHHHHHhhc
Q 025550 182 DAKKTPILWSHGMADRTVLFEAG--QAGPPFLEQAGISCEFKAYPGL----GHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 182 ~~~~~p~l~~~g~~D~~~~~~~~--~~~~~~l~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.++++|+++++|++|..++.+.+ +.+.+.+. +.++++++++ ||... +..+.+.+-|.++|.
T Consensus 289 ~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 289 EKIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred HhCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 14789999999999999987754 34444443 3589999985 99886 566666666665554
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.7e-17 Score=130.15 Aligned_cols=194 Identities=15% Similarity=0.143 Sum_probs=129.0
Q ss_pred CccEEEEEecCCCCCC-----------Cchhhh---hhhcCCCcceEEEEccC--CCCCCcccCCCCcCCccccccCCCC
Q 025550 38 ARNFILWLHGLGDSGP-----------ANEPIK---TLFTSPEFKLTKWSFPS--APNNPVTCNYGAVMPSWFDIHEIPV 101 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~-----------~~~~~~---~~~~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~w~~~~~~~~ 101 (251)
..+.||++||++++.. .|..++ ..+...+|.++++|+|| ++.+..+.. ......|..
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~-~~~~~~~~~------ 102 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI-NPGGRPYGS------ 102 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC-CCCCCcCCC------
Confidence 3478999999998652 355554 36667899999999998 332210000 000011100
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------
Q 025550 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------ 174 (251)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------ 174 (251)
......+.+.++++..+++ ..++ ++ +.++||||||.+++.++.++|+.++++|++++.......
T Consensus 103 ----~~~~~~~~~~~~~~~~~~~---~l~~--~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 103 ----DFPLITIRDDVKAQKLLLD---HLGI--EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred ----CCCCCcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 0112455666667766666 3443 56 999999999999999999999999999988764311000
Q ss_pred --------------------------h----------------------------------------hhhh---------
Q 025550 175 --------------------------L----------------------------------------IDQF--------- 179 (251)
Q Consensus 175 --------------------------~----------------------------------------~~~~--------- 179 (251)
. ...+
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 0 0000
Q ss_pred ---------------c--------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE-eCCCCCC
Q 025550 180 ---------------T--------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA-YPGLGHS 229 (251)
Q Consensus 180 ---------------~--------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~-~~g~~H~ 229 (251)
. ...+++|+++++|++|.+++++.++.+.+.+......+++++ ++++||.
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~ 333 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHD 333 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcc
Confidence 0 013578999999999999999998888888877544444444 4689999
Q ss_pred CCHHHHHHHHHHHHHhhc
Q 025550 230 ISNEELRNLESWIKTRMS 247 (251)
Q Consensus 230 ~~~~~~~~~~~~l~~~l~ 247 (251)
...+..+.+.+.|.++|+
T Consensus 334 ~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 334 AFLVETDQVEELIRGFLR 351 (351)
T ss_pred hhhcCHHHHHHHHHHHhC
Confidence 988888888887777763
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.8e-17 Score=128.11 Aligned_cols=183 Identities=15% Similarity=0.144 Sum_probs=114.3
Q ss_pred CCccEEEEEecCCCCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.|+||++||++++... ...+++.+.++||.++++|+|+++..+...... +. .....|+..
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~------~~----------~~~~~D~~~ 119 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRI------YH----------SGETEDARF 119 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcce------EC----------CCchHHHHH
Confidence 457899999999876543 344788899999999999999876432111000 00 011233333
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC--cceEEEeccCCCCcch----------hhh-----
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK--LGGGAIFSGWVPFNAS----------LID----- 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~i~~~~~~~~~~~----------~~~----- 177 (251)
.++.+.+ + .+..+++++||||||.++..++..+++. +.+++++++....... ...
T Consensus 120 ~i~~l~~------~--~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~ 191 (324)
T PRK10985 120 FLRWLQR------E--FGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLN 191 (324)
T ss_pred HHHHHHH------h--CCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHH
Confidence 3333321 2 2346899999999999888777776543 7888888775431100 000
Q ss_pred ----------------------hhc----------------------------------ccCCCCCEEEEccCCCCcccc
Q 025550 178 ----------------------QFT----------------------------------SDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 178 ----------------------~~~----------------------------------~~~~~~p~l~~~g~~D~~~~~ 201 (251)
... ..++++|+++++|++|.+++.
T Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~ 271 (324)
T PRK10985 192 LLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTH 271 (324)
T ss_pred HHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCCh
Confidence 000 024688999999999999887
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCCHH--------H-HHHHHHHHHHhhc
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNE--------E-LRNLESWIKTRMS 247 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~--------~-~~~~~~~l~~~l~ 247 (251)
+....+ .+.....++.+++++||....+ . -+.+.+|+...+.
T Consensus 272 ~~~~~~----~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 272 EVIPKP----ESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred hhChHH----HHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 654433 2333357888999999964322 1 3557778776653
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-17 Score=132.27 Aligned_cols=177 Identities=15% Similarity=0.155 Sum_probs=118.3
Q ss_pred ccEEEEEecCCCCCC------------Cchhhhh---hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC
Q 025550 39 RNFILWLHGLGDSGP------------ANEPIKT---LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA 103 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~------------~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~ 103 (251)
.| +|++||+.++.. .|..+.. .|...+|.++.+|+||++.+.
T Consensus 58 ~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~---------------------- 114 (343)
T PRK08775 58 AP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL---------------------- 114 (343)
T ss_pred CC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC----------------------
Confidence 35 555655555444 5777765 464568999999999764321
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------
Q 025550 104 SSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---------- 173 (251)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---------- 173 (251)
. ......+.++++.++++ ..+++ +.+.|+||||||.+++.++.++|++++++|++++......
T Consensus 115 --~-~~~~~~~~a~dl~~ll~---~l~l~-~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~ 187 (343)
T PRK08775 115 --D-VPIDTADQADAIALLLD---ALGIA-RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQR 187 (343)
T ss_pred --C-CCCCHHHHHHHHHHHHH---HcCCC-cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHH
Confidence 0 01123445666777776 33332 2357999999999999999999999999998875321000
Q ss_pred ----------------h-------------------hhhh----------------------------------------
Q 025550 174 ----------------S-------------------LIDQ---------------------------------------- 178 (251)
Q Consensus 174 ----------------~-------------------~~~~---------------------------------------- 178 (251)
. +...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T PRK08775 188 RAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID 267 (343)
T ss_pred HHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh
Confidence 0 0000
Q ss_pred h---cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC-CCCCCCHHHHHHHHHHHHHhhcC
Q 025550 179 F---TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG-LGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 179 ~---~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
. ...++++|+++++|+.|.+++.+.++.+.+.+. ...+++++++ +||....+..+.+.+-|.++|..
T Consensus 268 ~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~---p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 268 LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG---PRGSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC---CCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 0 002367899999999999999886655555442 2468889985 89999888877777777777753
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-18 Score=127.27 Aligned_cols=162 Identities=26% Similarity=0.388 Sum_probs=111.8
Q ss_pred EEEEecCCCC---CCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 42 ILWLHGLGDS---GPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 42 vv~~HG~~~~---~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
||++||+|.. ......++..++ +.|+.++.++||.+|+.+. +...+|+.++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~-----------------------p~~~~D~~~a~~ 57 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPF-----------------------PAALEDVKAAYR 57 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSST-----------------------THHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccc-----------------------ccccccccccee
Confidence 7999998853 334444555555 4899999999998876321 334455555666
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCC-cc--hhh-------h--h---
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPF-NA--SLI-------D--Q--- 178 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~-~~--~~~-------~--~--- 178 (251)
++.+..+ +.+++.++|+|+|+|.||.+++.++....+ .++++++++|+.+. .. ... + .
T Consensus 58 ~l~~~~~---~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~ 134 (211)
T PF07859_consen 58 WLLKNAD---KLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPA 134 (211)
T ss_dssp HHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBH
T ss_pred eeccccc---cccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccc
Confidence 6555444 567889999999999999999999876433 38999999998654 11 100 0 0
Q ss_pred --------------------hc-----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 179 --------------------FT-----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 179 --------------------~~-----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.. ....-.|+++++|+.|.++ +++..++++|++.|+++++++++|..|.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 135 PKIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 00 0112459999999999875 477899999999999999999999999874
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-17 Score=138.91 Aligned_cols=223 Identities=19% Similarity=0.236 Sum_probs=151.1
Q ss_pred cceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh----hhh-hhcCCCcceEEEEccCCCC
Q 025550 5 KPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP----IKT-LFTSPEFKLTKWSFPSAPN 79 (251)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~----~~~-~~~~~g~~~~~~~~~~~~~ 79 (251)
.|...+..+..++.......+.|+... ..++.|+++.+||+.++...... +.. .+...|+.++.+|.+|.+.
T Consensus 495 ~p~~~~~~i~~~~~~~~~~~~lP~~~~---~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~ 571 (755)
T KOG2100|consen 495 LPIVEFGKIEIDGITANAILILPPNFD---PSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGG 571 (755)
T ss_pred CCcceeEEEEeccEEEEEEEecCCCCC---CCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCC
Confidence 344555555556666555445544433 55589999999998874332221 233 4678899999999997654
Q ss_pred CCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC-CC
Q 025550 80 NPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP-RK 158 (251)
Q Consensus 80 ~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-~~ 158 (251)
. |...+.+.. ..-...++.+....++.+++ ...+|.+||+|+|+|.||++++.++...| +.
T Consensus 572 ~------G~~~~~~~~---------~~lG~~ev~D~~~~~~~~~~---~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~ 633 (755)
T KOG2100|consen 572 Y------GWDFRSALP---------RNLGDVEVKDQIEAVKKVLK---LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDV 633 (755)
T ss_pred c------chhHHHHhh---------hhcCCcchHHHHHHHHHHHh---cccccHHHeEEeccChHHHHHHHHhhhCcCce
Confidence 2 221111110 11122344444444544444 45689999999999999999999999997 66
Q ss_pred cceEEEeccCCCCcch---hhhh------------------hcccCCCCC-EEEEccCCCCcccchhcccchHHHHhcCC
Q 025550 159 LGGGAIFSGWVPFNAS---LIDQ------------------FTSDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQAGI 216 (251)
Q Consensus 159 ~~~~i~~~~~~~~~~~---~~~~------------------~~~~~~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~ 216 (251)
+++.++++|..+.... ..++ ......+.| .|++||+.|..|+.+++..+.+.|+..|+
T Consensus 634 fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv 713 (755)
T KOG2100|consen 634 FKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV 713 (755)
T ss_pred EEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC
Confidence 8888999995543200 0000 011224444 59999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCCCH-----HHHHHHHHHHHHhhcC
Q 025550 217 SCEFKAYPGLGHSISN-----EELRNLESWIKTRMSC 248 (251)
Q Consensus 217 ~~~~~~~~g~~H~~~~-----~~~~~~~~~l~~~l~~ 248 (251)
+++..+||+.+|.+.. .....+..|+...+..
T Consensus 714 ~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 714 PFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred ceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 9999999999999863 3368888999876653
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.3e-18 Score=118.92 Aligned_cols=205 Identities=12% Similarity=0.172 Sum_probs=147.3
Q ss_pred eeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCC
Q 025550 8 VLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
..-.....+...++.|.+. .+..+|+++++|+-.++-....++++ .....+..++.++|+|.+.+..+
T Consensus 55 e~i~l~T~D~vtL~a~~~~--------~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gs--- 123 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLML--------SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGS--- 123 (300)
T ss_pred eEEEEEcCcceeEeeeeec--------ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCC---
Confidence 3344556677888888886 33488999999998887777777666 55667889999999987664211
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
...+.+.-.. +++++.+. +...+..++++.|-|.||.+|..+|+.+.+++.+++.-
T Consensus 124 --------------------psE~GL~lDs---~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivE 180 (300)
T KOG4391|consen 124 --------------------PSEEGLKLDS---EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVE 180 (300)
T ss_pred --------------------ccccceeccH---HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeee
Confidence 1111211111 22222222 56678889999999999999999999999999999987
Q ss_pred ccCCCCcchhhhh---------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 166 SGWVPFNASLIDQ---------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 166 ~~~~~~~~~~~~~---------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
..+.......... -.....++|+|++.|..|.++|+-..+++++...+. ..++.+||
T Consensus 181 NTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP 258 (300)
T KOG4391|consen 181 NTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFP 258 (300)
T ss_pred chhccchhhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCC
Confidence 7665542221110 011247899999999999999999988888877664 46899999
Q ss_pred CCCCCCC---HHHHHHHHHHHHHhhcC
Q 025550 225 GLGHSIS---NEELRNLESWIKTRMSC 248 (251)
Q Consensus 225 g~~H~~~---~~~~~~~~~~l~~~l~~ 248 (251)
++.|.-+ .-.++.+.+|+.+...+
T Consensus 259 ~gtHNDT~i~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 259 DGTHNDTWICDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CCccCceEEeccHHHHHHHHHHHhccC
Confidence 9999643 44578899999887764
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.2e-17 Score=130.66 Aligned_cols=114 Identities=17% Similarity=0.209 Sum_probs=70.3
Q ss_pred CccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..|+||++||++++...|..+. +.+...+|.++++|+||++.+..+...+ ..+ ... ......+.+
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~---~~~-~~~--------~~~~~~~~~ 107 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTP---APF-NAA--------RFPHVTIYD 107 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCC---CCC-CCC--------CCCceeHHH
Confidence 4477888888887766665432 3566678999999999987643211000 000 000 001112333
Q ss_pred HHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
.+......+.. ..+ .++ ..|+||||||.+++.+|.++|++++++|++++
T Consensus 108 ~~~~~~~~l~~--~lg--i~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 108 NVRAQHRLLTE--KFG--IERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred HHHHHHHHHHH--HhC--CCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 33332222211 233 457 47999999999999999999999999998854
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-17 Score=115.57 Aligned_cols=167 Identities=15% Similarity=0.235 Sum_probs=123.4
Q ss_pred CCccEEEEEecCCCCCCCc--hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPAN--EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
....++|++||+-+++..- ..++..+++.|+.++++||++.+++..+..+|... ..
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~----------------~e------ 88 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYN----------------TE------ 88 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCccc----------------ch------
Confidence 4567999999998887663 33788999999999999999988876655555311 11
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc--------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT-------------- 180 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~-------------- 180 (251)
+++|..+++... +...---+++|||-||-+++.++.++.+ +..++.++|.........+++.
T Consensus 89 -adDL~sV~q~~s--~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid 164 (269)
T KOG4667|consen 89 -ADDLHSVIQYFS--NSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFID 164 (269)
T ss_pred -HHHHHHHHHHhc--cCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCcee
Confidence 255555555432 1122223699999999999999999986 8888988886554333211111
Q ss_pred ------------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 181 ------------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 181 ------------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.....||+|-+||..|.+||.+++.++++.+.. .++++++|++|.+
T Consensus 165 ~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIEgADHny 240 (269)
T KOG4667|consen 165 VGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIEGADHNY 240 (269)
T ss_pred cCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC----CceEEecCCCcCc
Confidence 124789999999999999999999988888876 5899999999998
Q ss_pred CHH
Q 025550 231 SNE 233 (251)
Q Consensus 231 ~~~ 233 (251)
...
T Consensus 241 t~~ 243 (269)
T KOG4667|consen 241 TGH 243 (269)
T ss_pred cch
Confidence 743
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=129.02 Aligned_cols=195 Identities=13% Similarity=0.101 Sum_probs=129.6
Q ss_pred CccEEEEEecCCCCCCC-------------chhhhh---hhcCCCcceEEEEccCC-CCCCccc-CCCCcCCccccccCC
Q 025550 38 ARNFILWLHGLGDSGPA-------------NEPIKT---LFTSPEFKLTKWSFPSA-PNNPVTC-NYGAVMPSWFDIHEI 99 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-------------~~~~~~---~~~~~g~~~~~~~~~~~-~~~~~~~-~~g~~~~~w~~~~~~ 99 (251)
..|.||++||++++... |..++. .+...+|.++++|++++ +.+.... ........|.
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~----- 121 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYG----- 121 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCccc-----
Confidence 35899999999998874 445442 34457999999999973 2110000 0000000000
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch----
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS---- 174 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~---- 174 (251)
......++.+.++++.++++. .+ .++ +.++||||||.+++.++.++|++++++|++++.......
T Consensus 122 -----~~~~~~~~~~~~~~~~~~l~~---l~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 191 (379)
T PRK00175 122 -----SDFPVITIRDWVRAQARLLDA---LG--ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAF 191 (379)
T ss_pred -----CCCCcCCHHHHHHHHHHHHHH---hC--CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHH
Confidence 000134566667777777773 34 346 589999999999999999999999999988764321000
Q ss_pred --------------------------------------------------h------------------hhhh-------
Q 025550 175 --------------------------------------------------L------------------IDQF------- 179 (251)
Q Consensus 175 --------------------------------------------------~------------------~~~~------- 179 (251)
+ ...+
T Consensus 192 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 271 (379)
T PRK00175 192 NEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDK 271 (379)
T ss_pred HHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHH
Confidence 0 0000
Q ss_pred --------------------c------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC-CC
Q 025550 180 --------------------T------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP-GL 226 (251)
Q Consensus 180 --------------------~------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~-g~ 226 (251)
. ...+++|+++++|++|.+++++.++.+.+.+...+..+++.+++ ++
T Consensus 272 ~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~ 351 (379)
T PRK00175 272 FVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPY 351 (379)
T ss_pred HhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 0 01367899999999999999999998999998876667888775 89
Q ss_pred CCCCCHHHHHHHHHHHHHhhc
Q 025550 227 GHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 227 ~H~~~~~~~~~~~~~l~~~l~ 247 (251)
||....+..+.+.+-|.++|+
T Consensus 352 GH~~~le~p~~~~~~L~~FL~ 372 (379)
T PRK00175 352 GHDAFLLDDPRYGRLVRAFLE 372 (379)
T ss_pred CchhHhcCHHHHHHHHHHHHH
Confidence 999887776666666666554
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.75 E-value=4e-17 Score=119.78 Aligned_cols=160 Identities=23% Similarity=0.252 Sum_probs=101.5
Q ss_pred CCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.+.|+||++||.+++..++.. +.+.-.+.||.+ .||..... ........|++... .... .+
T Consensus 14 ~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~Gfiv---vyP~~~~~----~~~~~cw~w~~~~~----~~g~---~d-- 77 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIV---VYPEQSRR----ANPQGCWNWFSDDQ----QRGG---GD-- 77 (220)
T ss_pred CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEE---Eccccccc----CCCCCccccccccc----ccCc---cc--
Confidence 367999999999998877655 223334456644 45543221 01122234544111 1111 11
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-hhh---hh----------
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA-SLI---DQ---------- 178 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~-~~~---~~---------- 178 (251)
...|..+++.+. +..+|++||.+.|+|.||.++..++..+|+.|+++..++|...... ... ..
T Consensus 78 --~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~ 155 (220)
T PF10503_consen 78 --VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPA 155 (220)
T ss_pred --hhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChH
Confidence 222333333333 7889999999999999999999999999999999998887432100 000 00
Q ss_pred -----h--cccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 179 -----F--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 179 -----~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
. .......|++++||+.|.+|.+.+.+++.+.+...
T Consensus 156 ~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 156 AAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 0 00123469999999999999999888888877664
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=124.45 Aligned_cols=204 Identities=14% Similarity=0.177 Sum_probs=124.7
Q ss_pred eeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhh-hhhhcCCCcceEEEEccCCCCCCcccCC
Q 025550 8 VLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPI-KTLFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
.....+.-.+..+..|+.-| +.+++.|+||++-|..+...++..+ .+.+...|++++++|.|+-+.++
T Consensus 165 i~~v~iP~eg~~I~g~LhlP------~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~----- 233 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLP------SGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP----- 233 (411)
T ss_dssp EEEEEEEETTCEEEEEEEES------SSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-----
T ss_pred cEEEEEeeCCcEEEEEEEcC------CCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-----
Confidence 33444555567777776543 2457889999999998888887665 45788999999999999764421
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
.|.- ..+... ....+.+.+.. ...+|.+||+++|.|+||+++..+|...+++++++|+.+
T Consensus 234 -----~~~l----------~~D~~~---l~~aVLd~L~~--~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~G 293 (411)
T PF06500_consen 234 -----KWPL----------TQDSSR---LHQAVLDYLAS--RPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALG 293 (411)
T ss_dssp -----TT-S-----------S-CCH---HHHHHHHHHHH--STTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES
T ss_pred -----cCCC----------CcCHHH---HHHHHHHHHhc--CCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeC
Confidence 1210 112222 22233333332 567899999999999999999999998888999999999
Q ss_pred cCCCCcch-----------hh---------------------hh--------hcccCCCCCEEEEccCCCCcccchhccc
Q 025550 167 GWVPFNAS-----------LI---------------------DQ--------FTSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 167 ~~~~~~~~-----------~~---------------------~~--------~~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
+.....-. .. .. +...+..+|+|.+.+++|++.|.++.+
T Consensus 294 a~vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~- 372 (411)
T PF06500_consen 294 APVHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSR- 372 (411)
T ss_dssp ---SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHH-
T ss_pred chHhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHH-
Confidence 85321100 00 00 002346789999999999999987543
Q ss_pred chHHHHhcCCeeEEEEeCCCC-CCCCHHHHHHHHHHHHHhh
Q 025550 207 GPPFLEQAGISCEFKAYPGLG-HSISNEELRNLESWIKTRM 246 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~-H~~~~~~~~~~~~~l~~~l 246 (251)
.+...+.+-+...++... |.-.......+.+||++.|
T Consensus 373 ---lia~~s~~gk~~~~~~~~~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 373 ---LIAESSTDGKALRIPSKPLHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp ---HHHHTBTT-EEEEE-SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHhcCCCCceeecCCCccccchHHHHHHHHHHHHHhc
Confidence 344444444566666434 7666788999999999876
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=147.67 Aligned_cols=188 Identities=18% Similarity=0.244 Sum_probs=126.2
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|||+||++++...|..+...|. .+|.++.+|+|+++.+...... .+ .......++....+
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~-----~~----------~~~~~~~si~~~a~ 1433 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHA-----KE----------TQTEPTLSVELVAD 1433 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCcccc-----cc----------ccccccCCHHHHHH
Confidence 45789999999999999999988886 4699999999988654211000 00 00011223445555
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS----------------------- 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~----------------------- 174 (251)
.+..+++. . +.+++.|+||||||.+++.++.++|+.+++++++++.......
T Consensus 1434 ~l~~ll~~---l--~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1434 LLYKLIEH---I--TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred HHHHHHHH---h--CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 66666552 2 3568999999999999999999999999999988763211000
Q ss_pred -h---------hhh----------h-------------------c----------ccCCCCCEEEEccCCCCcccchhcc
Q 025550 175 -L---------IDQ----------F-------------------T----------SDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 175 -~---------~~~----------~-------------------~----------~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
+ ... . . -.++++|+++++|++|..++ +.+.
T Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~ 1587 (1655)
T PLN02980 1509 IFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQ 1587 (1655)
T ss_pred HHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHH
Confidence 0 000 0 0 01367899999999998775 4445
Q ss_pred cchHHHHhcC--------CeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 206 AGPPFLEQAG--------ISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 206 ~~~~~l~~~~--------~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+.+.. ..+++++++++||....+..+.+.+-|.++|.
T Consensus 1588 ~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~ 1637 (1655)
T PLN02980 1588 KMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLT 1637 (1655)
T ss_pred HHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 5555554320 12589999999999987776666666655554
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.8e-16 Score=119.31 Aligned_cols=181 Identities=20% Similarity=0.228 Sum_probs=130.9
Q ss_pred CCccEEEEEecCCC---C--CCCchhhhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 37 MARNFILWLHGLGD---S--GPANEPIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 37 ~~~~~vv~~HG~~~---~--~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
.+.|+|||+||+|. + ...|..+...+ .+.+..++.+|||.+|+++.+. ..+
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa-----------------------~y~ 144 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA-----------------------AYD 144 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-----------------------cch
Confidence 68899999999883 2 33455555544 6678999999999999976443 345
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCCCCcchhhhh------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWVPFNASLIDQ------ 178 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~~~~~~~~~~------ 178 (251)
|..+++.++.+.. +.+.+.|.+|++|+|-|.||.+|..++.+. +..+++.|++.|++.........
T Consensus 145 D~~~Al~w~~~~~--~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~ 222 (336)
T KOG1515|consen 145 DGWAALKWVLKNS--WLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLN 222 (336)
T ss_pred HHHHHHHHHHHhH--HHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhc
Confidence 6666666665532 337888999999999999999999888763 34689999999966533221110
Q ss_pred --------------------------------hc-c------cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeE
Q 025550 179 --------------------------------FT-S------DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE 219 (251)
Q Consensus 179 --------------------------------~~-~------~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 219 (251)
.. . .....|++++.++.|.+. +++..+.++|++.|++++
T Consensus 223 ~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv~v~ 300 (336)
T KOG1515|consen 223 GSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGVEVT 300 (336)
T ss_pred CCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCCeEE
Confidence 00 0 113356999999999875 577789999999999999
Q ss_pred EEEeCCCCCCCC---H------HHHHHHHHHHHH
Q 025550 220 FKAYPGLGHSIS---N------EELRNLESWIKT 244 (251)
Q Consensus 220 ~~~~~g~~H~~~---~------~~~~~~~~~l~~ 244 (251)
+..++++.|.+. . +..+.+.+|+.+
T Consensus 301 ~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 301 LIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred EEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 999999999753 1 225666677654
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-16 Score=122.06 Aligned_cols=172 Identities=13% Similarity=0.055 Sum_probs=112.6
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...+.|+|||+||++.+...|..+++.++++||.++.+|+++... .. ...+..+..+
T Consensus 48 ~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~--------~~---------------~~~~i~d~~~ 104 (313)
T PLN00021 48 EAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAG--------PD---------------GTDEIKDAAA 104 (313)
T ss_pred CCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCC--------CC---------------chhhHHHHHH
Confidence 345779999999999998889999999999999999999875210 00 0112334445
Q ss_pred HHHHHHHHHHHHHH--cCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcch-------hhhhhc
Q 025550 115 AVRNVHAMIDKEVA--AGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNAS-------LIDQFT 180 (251)
Q Consensus 115 ~~~~l~~~i~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~-------~~~~~~ 180 (251)
.++++.+.++.... ...+.++++++|||+||.+++.++..+++ .+++++.+.+....... ......
T Consensus 105 ~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il~~~~~ 184 (313)
T PLN00021 105 VINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVLTYAPH 184 (313)
T ss_pred HHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCcccccCcc
Confidence 55555554432221 23567899999999999999999998874 57889988886533211 000011
Q ss_pred ccCCCCCEEEEccCCCC-----ccc--chhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 181 SDAKKTPILWSHGMADR-----TVL--FEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~-----~~~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
......|++++.+..|. .+| .-....-.+.+.+.+.+..+.+.+++||.
T Consensus 185 s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~ 240 (313)
T PLN00021 185 SFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHM 240 (313)
T ss_pred cccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcc
Confidence 22367999999988763 222 00111223344455557788888989994
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.7e-16 Score=115.05 Aligned_cols=217 Identities=17% Similarity=0.151 Sum_probs=143.3
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccC---CCCcCC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN---YGAVMP 91 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~g~~~~ 91 (251)
.++..+..+++-|. ....+.|+||-.||+++.+..|..+.. |...||.++.+|.||-+.....+. .|.+..
T Consensus 64 ~~g~rI~gwlvlP~-----~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~p 137 (321)
T COG3458 64 YGGARIKGWLVLPR-----HEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDP 137 (321)
T ss_pred cCCceEEEEEEeec-----ccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCC
Confidence 45567777776632 233788999999999998877655554 566999999999997766533221 122334
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.|....-.+ ..+..-+.....++-..++.+. -..+|.+||++.|.|+||.+++.++...| ++++++...|++.
T Consensus 138 G~mtrGilD-----~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 138 GFMTRGILD-----RKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred ceeEeeccc-----CCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 443322210 0111111111222222222222 45678999999999999999998888887 6899998888775
Q ss_pred Ccchhhhhh---------------------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 171 FNASLIDQF---------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 171 ~~~~~~~~~---------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
-.....+.. -+..++.|+|+..|--|+++++...-+.++.+.. +
T Consensus 212 df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~---~ 288 (321)
T COG3458 212 DFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT---S 288 (321)
T ss_pred cchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC---C
Confidence 433221110 0235899999999999999999987777777765 5
Q ss_pred eEEEEeCCCCCCCCHHH-HHHHHHHHHHhh
Q 025550 218 CEFKAYPGLGHSISNEE-LRNLESWIKTRM 246 (251)
Q Consensus 218 ~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l 246 (251)
+++.+|+--+|.-.+.. -+++..|++...
T Consensus 289 K~i~iy~~~aHe~~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 289 KTIEIYPYFAHEGGPGFQSRQQVHFLKILF 318 (321)
T ss_pred ceEEEeeccccccCcchhHHHHHHHHHhhc
Confidence 68888988889765444 455888887653
|
|
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-16 Score=111.48 Aligned_cols=190 Identities=23% Similarity=0.278 Sum_probs=131.7
Q ss_pred CCccEEEEEecCCCCCCCchhh----hhhhcCCCcceEEEEccCCCCCCcccC--------------CCCc-CCcccccc
Q 025550 37 MARNFILWLHGLGDSGPANEPI----KTLFTSPEFKLTKWSFPSAPNNPVTCN--------------YGAV-MPSWFDIH 97 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~--------------~g~~-~~~w~~~~ 97 (251)
.+++-|+++||+..++..+..- ...+... +-++|+.+|..-.... .+.. .+.||...
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~----~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n 78 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL----AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNN 78 (230)
T ss_pred CCCceEEEecchhhccHHHHHHhhhHHHHHHhh----heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccc
Confidence 3567899999999999887773 3334322 4566776663110000 0111 25566554
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC-CCCCcEEEEEeChhHHHHHHHHHhc--C------CCcceEEEeccC
Q 025550 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG-IDPNNVFVCGFSQGGALTLASVLLY--P------RKLGGGAIFSGW 168 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~--p------~~~~~~i~~~~~ 168 (251)
.. ........+.+++.|.+.+. +.+ .| +|+|+|+|+.++..++... . ..++-+|++||+
T Consensus 79 ~~-----~~~~~~~~eesl~yl~~~i~---enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf 146 (230)
T KOG2551|consen 79 EA-----SFTEYFGFEESLEYLEDYIK---ENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGF 146 (230)
T ss_pred cc-----ccccccChHHHHHHHHHHHH---HhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecC
Confidence 41 13334556666777777766 333 24 8999999999999888721 1 137889999998
Q ss_pred CCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH--HHHHHHHHHHHHhh
Q 025550 169 VPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--EELRNLESWIKTRM 246 (251)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--~~~~~~~~~l~~~l 246 (251)
...........-...+++|.|.+.|+.|.+++...+..+++.+.+. ....-+| ||.... ...+.+.+||...+
T Consensus 147 ~~~~~~~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 147 KFPSKKLDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA----TVLEHPG-GHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred CCCcchhhhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC----eEEecCC-CccCCCchHHHHHHHHHHHHHH
Confidence 8776555555556678999999999999999999999999988774 6666676 998864 45788999998877
Q ss_pred c
Q 025550 247 S 247 (251)
Q Consensus 247 ~ 247 (251)
.
T Consensus 222 ~ 222 (230)
T KOG2551|consen 222 Q 222 (230)
T ss_pred H
Confidence 5
|
|
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-15 Score=112.08 Aligned_cols=180 Identities=14% Similarity=0.107 Sum_probs=115.7
Q ss_pred CCccEEEEEecCCCCCCC----chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGDSGPA----NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.++++||++||+++.... |..+++.|++.||.++.+|+|+++.+.... .....
T Consensus 23 ~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~-----------------------~~~~~ 79 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF-----------------------AAARW 79 (266)
T ss_pred CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc-----------------------ccCCH
Confidence 456899999999865433 445678898899999999999886542110 01122
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh--------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ-------------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~-------------- 178 (251)
...++++...++.+.+. +.++++|+||||||.+++.++.++|+.++++|++++.......+.+.
T Consensus 80 ~~~~~Dv~~ai~~L~~~--~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~ 157 (266)
T TIGR03101 80 DVWKEDVAAAYRWLIEQ--GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGES 157 (266)
T ss_pred HHHHHHHHHHHHHHHhc--CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccc
Confidence 23344444444433233 35689999999999999999999999999999998855422111100
Q ss_pred ------hc-------------------------c------cCCCCCEEEEccCC--CCcccchhcccchHHHHhcCCeeE
Q 025550 179 ------FT-------------------------S------DAKKTPILWSHGMA--DRTVLFEAGQAGPPFLEQAGISCE 219 (251)
Q Consensus 179 ------~~-------------------------~------~~~~~p~l~~~g~~--D~~~~~~~~~~~~~~l~~~~~~~~ 219 (251)
+. . .....+++++.-.. |.. ......++.+.+++.|++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~v~ 236 (266)
T TIGR03101 158 AEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGAT-LSPVFSRLGEQWVQSGVEVT 236 (266)
T ss_pred cccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCC-CCHHHHHHHHHHHHcCCeEe
Confidence 00 0 01245677766532 222 22345578999999999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 220 FKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 220 ~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
...++|- -++...++.++=..|.
T Consensus 237 ~~~~~~~-~~~~~~~~~~~p~~~~ 259 (266)
T TIGR03101 237 VDLVPGP-AFWQTQEIEEAPELIA 259 (266)
T ss_pred eeecCCc-hhhcchhhhHhHHHHH
Confidence 9999986 3334444444444443
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.8e-16 Score=111.91 Aligned_cols=184 Identities=20% Similarity=0.267 Sum_probs=128.5
Q ss_pred cEEEEEec-CCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 40 NFILWLHG-LGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 40 ~~vv~~HG-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
.+||++-. +|....+-+..+..++..||.++++|+-.. |..+. ..-.....|+...+. +....++...++
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~--~~~~~~~~w~~~~~~------~~~~~~i~~v~k 111 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPS--LQKSERPEWMKGHSP------PKIWKDITAVVK 111 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCC--CChhhhHHHHhcCCc------ccchhHHHHHHH
Confidence 44555554 566666677889999999999999997543 21110 011112335444332 333444444444
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
+++ .+-+.++|+++|+++||.++..+....| .+.+++++.|......+ ....++|++++.|+.|.
T Consensus 112 ~lk--------~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~~D------~~~vk~Pilfl~ae~D~ 176 (242)
T KOG3043|consen 112 WLK--------NHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDSAD------IANVKAPILFLFAELDE 176 (242)
T ss_pred HHH--------HcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCChhH------HhcCCCCEEEEeecccc
Confidence 443 2335789999999999999998888887 68888888886644332 24578999999999999
Q ss_pred cccchhcccchHHHHhcCC-eeEEEEeCCCCCCCCH---------------HHHHHHHHHHHHhh
Q 025550 198 TVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHSISN---------------EELRNLESWIKTRM 246 (251)
Q Consensus 198 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~~~~---------------~~~~~~~~~l~~~l 246 (251)
.+|++...++.+.+++... ..++++|+|.+|.+.. +...++..||.+++
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 9999999889999988632 2579999999998752 23677888888876
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.7e-17 Score=120.08 Aligned_cols=176 Identities=21% Similarity=0.295 Sum_probs=97.8
Q ss_pred CccEEEEEecCCCCCCCchhhhh----hhcCCCcceEEEEccCCCCCC--cc------------cCCCCcCCccccccCC
Q 025550 38 ARNFILWLHGLGDSGPANEPIKT----LFTSPEFKLTKWSFPSAPNNP--VT------------CNYGAVMPSWFDIHEI 99 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~--~~------------~~~g~~~~~w~~~~~~ 99 (251)
+++-|++|||++.++..++.... .|.+.++ .++|+.+|... .+ .......+.|+.....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~---ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDF---EFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT----EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcE---EEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 56789999999999988887444 3433244 44444443321 00 0112235667765432
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccCCCC
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGWVPF 171 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~~~~ 171 (251)
.....++.++++.+.+.+++ .+. =.+|+|||+||.+|..++... ...++.+|+++|+.+.
T Consensus 80 ------~~~~~~~~~sl~~l~~~i~~---~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 80 ------DHEYEGLDESLDYLRDYIEE---NGP---FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp ------SGGG---HHHHHHHHHHHHH---H------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ------cccccCHHHHHHHHHHHHHh---cCC---eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 33467788888888888874 331 248999999999998887542 2258999999998886
Q ss_pred cchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH
Q 025550 172 NASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN 232 (251)
Q Consensus 172 ~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~ 232 (251)
.......+....+++|++.++|++|.+++.+.++.+.+.+... .+++..+| ||.+..
T Consensus 148 ~~~~~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 148 DPDYQELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHVPR 204 (212)
T ss_dssp EE-GTTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS---
T ss_pred chhhhhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcCcC
Confidence 6555444455668999999999999999998888899988874 68888886 998764
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=110.99 Aligned_cols=180 Identities=13% Similarity=0.115 Sum_probs=126.6
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
...+..++++|=.|+++..|+.+...+. ..+..+.+.+||.+.+. ...-..++.+.
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp-~~iel~avqlPGR~~r~-----------------------~ep~~~di~~L 59 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLP-ADIELLAVQLPGRGDRF-----------------------GEPLLTDIESL 59 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCC-chhheeeecCCCccccc-----------------------CCcccccHHHH
Confidence 3466788999988999999999888775 36888999999765431 12234455555
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcch-----------hhhh---
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNAS-----------LIDQ--- 178 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~-----------~~~~--- 178 (251)
++.+...+. . -...++++++||||||.+|..+|.+... ...+++..++..|.... +.+.
T Consensus 60 ad~la~el~---~-~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~ 135 (244)
T COG3208 60 ADELANELL---P-PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVD 135 (244)
T ss_pred HHHHHHHhc---c-ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHH
Confidence 555544333 1 2334689999999999999999987432 25556655443331110 0000
Q ss_pred ----------------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 179 ----------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 179 ----------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
.......+|+.++.|++|..++.+....+.+..++ ..+++.++
T Consensus 136 lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~---~f~l~~fd 212 (244)
T COG3208 136 LGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG---DFTLRVFD 212 (244)
T ss_pred hCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC---CceEEEec
Confidence 01125889999999999999998866555555543 68999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhc
Q 025550 225 GLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 225 g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
| ||++..+..+++.++|.+.+.
T Consensus 213 G-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 213 G-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred C-cceehhhhHHHHHHHHHHHhh
Confidence 8 999999999999999999885
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=120.54 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=115.5
Q ss_pred ccEEEEEecCCCCCCC-----chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 39 RNFILWLHGLGDSGPA-----NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.+.||++||...+... ++.+++.|.++||.++.+|+++.+.. .. ..+..+..
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s---------~~--------------~~~~~d~~ 118 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRA---------DR--------------YLTLDDYI 118 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHH---------Hh--------------cCCHHHHH
Confidence 3459999997544333 35688999999999999999754321 00 11112221
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-------------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------- 174 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------- 174 (251)
.+.+.+.++.+.+ ..+.+++.++|||+||.+++.++..+|+.+++++++++.......
T Consensus 119 --~~~~~~~v~~l~~-~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (350)
T TIGR01836 119 --NGYIDKCVDYICR-TSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDT 195 (350)
T ss_pred --HHHHHHHHHHHHH-HhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHh
Confidence 1123333333321 124568999999999999999999999999999988874432100
Q ss_pred ---------------------hh----------------hhh-------c------------------------------
Q 025550 175 ---------------------LI----------------DQF-------T------------------------------ 180 (251)
Q Consensus 175 ---------------------~~----------------~~~-------~------------------------------ 180 (251)
.. ..+ .
T Consensus 196 ~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~ 275 (350)
T TIGR01836 196 MGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEI 275 (350)
T ss_pred cCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEE
Confidence 00 000 0
Q ss_pred ------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-------HHHHHHHHHHHHH
Q 025550 181 ------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-------NEELRNLESWIKT 244 (251)
Q Consensus 181 ------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 244 (251)
..++++|+++++|++|.+++++.++.+.+.+.. .+++++++++ ||... .+..+.+.+||.+
T Consensus 276 ~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 276 GGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcCC-CCEEEEECchhHhhhhHHHHHHHHh
Confidence 013688999999999999999888777776643 3578888885 88532 2345778888765
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=121.48 Aligned_cols=140 Identities=17% Similarity=0.168 Sum_probs=80.4
Q ss_pred eeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCch------hhhhhhcCCCcceEEEEccCCCCCC
Q 025550 8 VLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANE------PIKTLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
....+...|+-.+..+.++..... ....++|.|+++||.+.++..|. .++..|+++||.++.+|.|++....
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~--~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~ 122 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPR--LGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSY 122 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCC--CCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccccccc
Confidence 344455566666666665422111 12234688999999988887773 2555688899999999999764311
Q ss_pred cccCCC-CcCCccccccCCCCCCCCCCChhHHHHH-HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--
Q 025550 82 VTCNYG-AVMPSWFDIHEIPVTASSPKDESSLLKA-VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-- 157 (251)
Q Consensus 82 ~~~~~g-~~~~~w~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-- 157 (251)
...... ....-| + ....+. ..++.++++.+.+. ..+++.++|||+||.+++.++ .+|+
T Consensus 123 gh~~~~~~~~~fw--------------~-~s~~e~a~~Dl~a~id~i~~~--~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 123 GHVTLSEKDKEFW--------------D-WSWQELALYDLAEMIHYVYSI--TNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred CCCCCCccchhcc--------------C-CcHHHHHHHHHHHHHHHHHhc--cCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 000000 000001 1 112222 25666666654322 246899999999999998444 5564
Q ss_pred -CcceEEEecc
Q 025550 158 -KLGGGAIFSG 167 (251)
Q Consensus 158 -~~~~~i~~~~ 167 (251)
.++.+++++|
T Consensus 185 ~~v~~~~~l~P 195 (395)
T PLN02872 185 EMVEAAALLCP 195 (395)
T ss_pred HHHHHHHHhcc
Confidence 3444444444
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=105.29 Aligned_cols=174 Identities=15% Similarity=0.108 Sum_probs=117.7
Q ss_pred CCCCccEEEEEecCC---CCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 35 NPMARNFILWLHGLG---DSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
..+..|+.|++|--. ++..+ -..++..|.+.|+.+++++|++.+.+..+...| --..
T Consensus 24 ~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G------------------iGE~ 85 (210)
T COG2945 24 KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG------------------IGEL 85 (210)
T ss_pred CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC------------------cchH
Confidence 356789999999744 33222 233677899999999999999876654333333 1234
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEE
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPIL 189 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l 189 (251)
+|...+++|+++ .+-+.....+.|+|+|+++++.+|.+.|+ ....+++++..... +..-......|.+
T Consensus 86 ~Da~aaldW~~~-------~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~----dfs~l~P~P~~~l 153 (210)
T COG2945 86 EDAAAALDWLQA-------RHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY----DFSFLAPCPSPGL 153 (210)
T ss_pred HHHHHHHHHHHh-------hCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch----hhhhccCCCCCce
Confidence 566666666654 33344445789999999999999999986 55566666655421 1111223568999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHHH
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIK 243 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 243 (251)
+++|+.|++++.....++.+- .+.+.++.++++|+|..+. .+.+.+|+.
T Consensus 154 vi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 154 VIQGDADDVVDLVAVLKWQES-----IKITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred eEecChhhhhcHHHHHHhhcC-----CCCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 999999998887754433332 4678899999999998443 466677764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=129.50 Aligned_cols=178 Identities=12% Similarity=0.111 Sum_probs=114.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|.|||+||++++...|..+.+.| ..+|.++.+|+|+++.+.... .....++.+.++
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~a~ 81 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPK---------------------RTAAYTLARLAD 81 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCC---------------------cccccCHHHHHH
Confidence 3578999999999999999999988 578999999999886542110 111234566677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCC----------C----c---------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVP----------F----N--------- 172 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~----------~----~--------- 172 (251)
++..+++. .+. .+++.|+||||||.+++.++.+. +..+..++.+++... . .
T Consensus 82 dl~~~i~~---l~~-~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (582)
T PRK05855 82 DFAAVIDA---VSP-DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQ 157 (582)
T ss_pred HHHHHHHH---hCC-CCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHH
Confidence 77777773 222 24599999999999998776652 233333333322110 0 0
Q ss_pred -------------------------chhhh---h--------------------------------h---cccCCCCCEE
Q 025550 173 -------------------------ASLID---Q--------------------------------F---TSDAKKTPIL 189 (251)
Q Consensus 173 -------------------------~~~~~---~--------------------------------~---~~~~~~~p~l 189 (251)
..... . . .....++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 237 (582)
T PRK05855 158 LLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQ 237 (582)
T ss_pred HhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceE
Confidence 00000 0 0 0012679999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+++|++|.+++....+.+.+.+. ..++++++ +||....+..+.+.+.+.+++
T Consensus 238 ii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl 289 (582)
T PRK05855 238 LIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHWLPMSHPQVLAAAVAEFV 289 (582)
T ss_pred EEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCcchhhChhHHHHHHHHHH
Confidence 99999999999887776665543 34667777 599987666555554444444
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-14 Score=116.45 Aligned_cols=199 Identities=16% Similarity=0.093 Sum_probs=133.8
Q ss_pred CCCCccEEEEEecCCCCCCC-------------chhhhh---hhcCCCcceEEEEccCCCCCC---------cccCCCCc
Q 025550 35 NPMARNFILWLHGLGDSGPA-------------NEPIKT---LFTSPEFKLTKWSFPSAPNNP---------VTCNYGAV 89 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~-------------~~~~~~---~~~~~g~~~~~~~~~~~~~~~---------~~~~~g~~ 89 (251)
...+.++||++|+++++... |..++- .+-...|-++.++..+...+. .+...+.+
T Consensus 52 n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg 131 (389)
T PRK06765 52 NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTG 131 (389)
T ss_pred CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCC
Confidence 33556999999999885421 444333 466678889999998764321 11111110
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVF-VCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..| .......++.+.++.+..+++ ..++ +++. ++||||||.+++.++.++|++++++|++++.
T Consensus 132 -~~~----------~~~fP~~t~~d~~~~~~~ll~---~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 132 -KPY----------GMDFPVVTILDFVRVQKELIK---SLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred -Ccc----------CCCCCcCcHHHHHHHHHHHHH---HcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 111 001223566667777777776 3444 4665 9999999999999999999999999998653
Q ss_pred CCCcch-------------------------------------------------h-hhhhc------------------
Q 025550 169 VPFNAS-------------------------------------------------L-IDQFT------------------ 180 (251)
Q Consensus 169 ~~~~~~-------------------------------------------------~-~~~~~------------------ 180 (251)
...... . ...+.
T Consensus 196 ~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 196 PQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTS 275 (389)
T ss_pred CCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhh
Confidence 211000 0 00000
Q ss_pred -------------------------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 181 -------------------------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 181 -------------------------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
...+++|+++++|+.|.++|++.++.+.+.+...+.+
T Consensus 276 ~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 276 FEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCC
Confidence 0136899999999999999999888888888765556
Q ss_pred eEEEEeCC-CCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 218 CEFKAYPG-LGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 218 ~~~~~~~g-~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
.+++++++ .||....+..+.+.+-|.++|..+
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHHHHHccc
Confidence 89999985 899988888777777777777643
|
|
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.6e-15 Score=120.88 Aligned_cols=209 Identities=17% Similarity=0.207 Sum_probs=146.0
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCc--hhhhh--hhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PAN--EPIKT--LFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~--~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
..+..+-..+..|.... ..+++|+++++-|+.+-. ..| ....+ .|++.||.++.+|-+|.-.+ |
T Consensus 621 ~tg~~lYgmiyKPhn~~---pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hR------G 691 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQ---PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHR------G 691 (867)
T ss_pred CCCcEEEEEEEccccCC---CCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcccc------c
Confidence 34444444445543333 566799999999988532 222 22222 68889999999998875443 5
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHc-CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
....+|+.. ...+.++++.++.++-+.+ +. -+|.+||+|-|+|+||+++++...++|+.++.+|+-+
T Consensus 692 lkFE~~ik~---------kmGqVE~eDQVeglq~Lae---q~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGa 759 (867)
T KOG2281|consen 692 LKFESHIKK---------KMGQVEVEDQVEGLQMLAE---QTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGA 759 (867)
T ss_pred hhhHHHHhh---------ccCeeeehhhHHHHHHHHH---hcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccC
Confidence 555555433 3455666667777766666 55 4599999999999999999999999999999888766
Q ss_pred cCCCC---cchhhhhh-----------c----------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 167 GWVPF---NASLIDQF-----------T----------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 167 ~~~~~---~~~~~~~~-----------~----------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
+.... .....+++ . -......++++||--|..|...+...+...|.++|.+.++.+
T Consensus 760 pVT~W~~YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~I 839 (867)
T KOG2281|consen 760 PVTDWRLYDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQI 839 (867)
T ss_pred cceeeeeecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEE
Confidence 63321 11111110 0 012455699999999999999999999999999999999999
Q ss_pred eCCCCCCCCHHH-----HHHHHHHHHH
Q 025550 223 YPGLGHSISNEE-----LRNLESWIKT 244 (251)
Q Consensus 223 ~~g~~H~~~~~~-----~~~~~~~l~~ 244 (251)
||+.-|.....+ -..+..|+++
T Consensus 840 fP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 840 FPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccccCCCccchhHHHHHHHHHhh
Confidence 999999876332 2446666654
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.63 E-value=1e-14 Score=103.63 Aligned_cols=157 Identities=20% Similarity=0.218 Sum_probs=99.6
Q ss_pred EEEEecCCCCC-CCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 42 ILWLHGLGDSG-PANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 42 vv~~HG~~~~~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+++||++++. .+|.. +.+.+... ..+..+. .+..++.+-+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~----~~V~~~~------------------------------~~~P~~~~W~~~l 46 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS----VRVEQPD------------------------------WDNPDLDEWVQAL 46 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS----EEEEEC--------------------------------TS--HHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC----eEEeccc------------------------------cCCCCHHHHHHHH
Confidence 68999999764 56777 44456544 3444431 1233444445555
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHH-HhcCCCcceEEEeccCCCC-cchhhh------hhcccCCCCCEEEE
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASV-LLYPRKLGGGAIFSGWVPF-NASLID------QFTSDAKKTPILWS 191 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~p~~~~~~i~~~~~~~~-~~~~~~------~~~~~~~~~p~l~~ 191 (251)
.+.+. .+ .++++++|||+|+..++.++ .....+++++++++|+... ...... .........|.+++
T Consensus 47 ~~~i~-----~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~vi 120 (171)
T PF06821_consen 47 DQAID-----AI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVI 120 (171)
T ss_dssp HHCCH-----C--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEE
T ss_pred HHHHh-----hc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEE
Confidence 55444 12 35699999999999999999 6677889999999998653 111111 11122355677999
Q ss_pred ccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHHH
Q 025550 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIK 243 (251)
Q Consensus 192 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 243 (251)
.+++|+.+|.+.++.+.+.+.. +++.++++||....+. +..+.+.|+
T Consensus 121 aS~nDp~vp~~~a~~~A~~l~a-----~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 121 ASDNDPYVPFERAQRLAQRLGA-----ELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EETTBSSS-HHHHHHHHHHHT------EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EcCCCCccCHHHHHHHHHHcCC-----CeEECCCCCCcccccCCCchHHHHHHhc
Confidence 9999999999999889888865 8999999999876543 455555544
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6e-14 Score=113.27 Aligned_cols=188 Identities=19% Similarity=0.184 Sum_probs=116.8
Q ss_pred CCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.++.|+|+++||...... ....+....++....-+++.++..... . .+.. .......-..
T Consensus 206 ~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~------~----~R~~--------el~~~~~f~~ 267 (411)
T PRK10439 206 PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDT------T----HRSQ--------ELPCNADFWL 267 (411)
T ss_pred CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCc------c----cccc--------cCCchHHHHH
Confidence 357899999999553221 122233334434444445555533110 0 0000 0011222233
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------hhhhhhcc---cC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA-------SLIDQFTS---DA 183 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~-------~~~~~~~~---~~ 183 (251)
..+++|...|++......++++.+|+|+||||..++++++++|+.|.+++++||.+-... .+...+.. ..
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~~~~ 347 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGEVSA 347 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHhcccCC
Confidence 345666666665322334778899999999999999999999999999999999652111 11222222 12
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIK 243 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 243 (251)
.+..+++.+|+.|..+ .+..+.+.+.|++.|.++++.+++| ||... ...+.+.+.||-
T Consensus 348 ~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 348 RGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDALCWRGGLIQGLIDLW 407 (411)
T ss_pred CCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHHHHHHHHHHHHHh
Confidence 3456888999998644 4566889999999999999999998 89753 455666666654
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.1e-15 Score=117.73 Aligned_cols=185 Identities=14% Similarity=0.203 Sum_probs=89.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCccc-CCC-----------CcCCccccccCCCCCCC
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTC-NYG-----------AVMPSWFDIHEIPVTAS 104 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~g-----------~~~~~w~~~~~~~~~~~ 104 (251)
.+.|+|||.||.+++...|..++..|+++||.|++++.++........ ..+ .....|.+.........
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 679999999999999999999999999999999999999653321111 000 00112332222100000
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH--H-------------------cCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE
Q 025550 105 SPKDESSLLKAVRNVHAMIDKEV--A-------------------AGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA 163 (251)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~i~~~~--~-------------------~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i 163 (251)
.......+..-+.++..+++.+. . ..+|.++|+++|||+||..+..++.+. .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 00001122222333333333221 1 123567899999999999999887777 4799999
Q ss_pred EeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 164 IFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+.||..+.... .. ...+.|+|+++.+.= . -..+...+.+ +...+....+..+.|..|.
T Consensus 257 ~LD~W~~Pl~~~--~~--~~i~~P~L~InSe~f-~-~~~~~~~~~~-~~~~~~~~~~~ti~gt~H~ 315 (379)
T PF03403_consen 257 LLDPWMFPLGDE--IY--SKIPQPLLFINSESF-Q-WWENIFRMKK-VISNNKESRMLTIKGTAHL 315 (379)
T ss_dssp EES---TTS-GG--GG--GG--S-EEEEEETTT----HHHHHHHHT-T--TTS-EEEEEETT--GG
T ss_pred EeCCcccCCCcc--cc--cCCCCCEEEEECccc-C-ChhhHHHHHH-HhccCCCcEEEEECCCcCC
Confidence 999987543221 11 346789999987652 1 2222222222 2223445678889999994
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.2e-14 Score=99.84 Aligned_cols=154 Identities=20% Similarity=0.263 Sum_probs=98.8
Q ss_pred EEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+++||+.++....+. +.+.+.+.+... .+-.|.. ......+++.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~-~~~~p~l-------------------------------~~~p~~a~~~l 49 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDI-QYPCPDL-------------------------------PPFPEEAIAQL 49 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCc-eEECCCC-------------------------------CcCHHHHHHHH
Confidence 7999999998877665 455666554322 2222211 12234445666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc-------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT------------------- 180 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~------------------- 180 (251)
.+.++. . ..+.++|+|.|+||..|.+++.+++ +++ |+++|.+.+...+.+.+.
T Consensus 50 ~~~i~~---~--~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~ 121 (187)
T PF05728_consen 50 EQLIEE---L--KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIE 121 (187)
T ss_pred HHHHHh---C--CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhh
Confidence 666652 2 3345999999999999999998886 455 668876654433322111
Q ss_pred --------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 181 --------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 181 --------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
......++++++++.|+++++..+ .+.++. +..++.+|++|.+. .+..+.+.+|+
T Consensus 122 ~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~~----~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 122 ELKALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYRG----CAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred hcceEeccccCCCccEEEEEecCCcccCHHHH---HHHhcC----ceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 112457999999999999998543 333433 23445677899986 55677888876
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=102.53 Aligned_cols=118 Identities=25% Similarity=0.400 Sum_probs=79.1
Q ss_pred CCccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.+.|+||++||.++++..+.... +...+.||.|+ ||+.-... ........|+...+ ...+..
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~---yPdg~~~~---wn~~~~~~~~~p~~------~~~g~d--- 123 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVA---YPDGYDRA---WNANGCGNWFGPAD------RRRGVD--- 123 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEE---CcCccccc---cCCCcccccCCccc------ccCCcc---
Confidence 34499999999998887666633 34556677555 44211100 00111222322221 022223
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.+..|++++..+. +.++|++||.+.|.|.||.++..+++.+|+.+.++..+++..+
T Consensus 124 -dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~ 180 (312)
T COG3509 124 -DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLA 180 (312)
T ss_pred -HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccC
Confidence 3556666666666 8999999999999999999999999999999999999998763
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.5e-14 Score=103.65 Aligned_cols=119 Identities=22% Similarity=0.363 Sum_probs=77.6
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------hhh---------------------
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA----------SLI--------------------- 176 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~----------~~~--------------------- 176 (251)
+..++.++|+|+|.|.||-+|+.+|..+| .++++|+++|..-... .+.
T Consensus 16 ~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ 94 (213)
T PF08840_consen 16 HPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWNEPGLLRSRY 94 (213)
T ss_dssp STTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-TTS-EE-TT
T ss_pred CCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceecCCcceehhh
Confidence 55678899999999999999999999999 6999999987322110 000
Q ss_pred ------------hhhcccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCe--eEEEEeCCCCCCCC----------
Q 025550 177 ------------DQFTSDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGIS--CEFKAYPGLGHSIS---------- 231 (251)
Q Consensus 177 ------------~~~~~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~---------- 231 (251)
..+..+++++|+|++.|++|...|.. .++.+.++|++.+.+ ++++.|+++||.+.
T Consensus 95 ~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~ 174 (213)
T PF08840_consen 95 AFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRAS 174 (213)
T ss_dssp -B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EE
T ss_pred hhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccc
Confidence 00112358999999999999998764 455667788888765 88899999999652
Q ss_pred ----------------------HHHHHHHHHHHHHhhc
Q 025550 232 ----------------------NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 ----------------------~~~~~~~~~~l~~~l~ 247 (251)
.+.+.++++||+++|.
T Consensus 175 ~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 175 YHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp EETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1237889999999885
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-13 Score=102.47 Aligned_cols=184 Identities=17% Similarity=0.141 Sum_probs=124.9
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
...+.|.++++||.-+++.+|+.+...|.. .+..++.+|.+.++.+|....+ +..
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h------------------------~~~ 103 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH------------------------NYE 103 (315)
T ss_pred ccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccccc------------------------CHH
Confidence 445789999999999999999998886553 4668899999988876544322 244
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhH-HHHHHHHHhcCCCcceEEEec--c-CCCCcc-h--------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGG-ALTLASVLLYPRKLGGGAIFS--G-WVPFNA-S-------------- 174 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~p~~~~~~i~~~--~-~~~~~~-~-------------- 174 (251)
++.+++..+++... ......++.|+|||||| .+++..+..+|+.+..+|... | ..+... .
T Consensus 104 ~ma~dv~~Fi~~v~-~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~ 182 (315)
T KOG2382|consen 104 AMAEDVKLFIDGVG-GSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLS 182 (315)
T ss_pred HHHHHHHHHHHHcc-cccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhcccc
Confidence 44555555555321 01124578999999999 777888888888776665542 2 111000 0
Q ss_pred ---------hhh-----------------hh----------------------------------cccCCCCCEEEEccC
Q 025550 175 ---------LID-----------------QF----------------------------------TSDAKKTPILWSHGM 194 (251)
Q Consensus 175 ---------~~~-----------------~~----------------------------------~~~~~~~p~l~~~g~ 194 (251)
..+ .+ .......|+++++|.
T Consensus 183 ~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~ 262 (315)
T KOG2382|consen 183 IGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGL 262 (315)
T ss_pred ccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecC
Confidence 000 00 002367899999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++..++.+.- ..+++....++++.++++||+...|.++.+++-+.+++.
T Consensus 263 ~S~fv~~~~~----~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 263 QSKFVPDEHY----PRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred CCCCcChhHH----HHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 9999997743 344444445899999999999998887777777766554
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.3e-13 Score=100.50 Aligned_cols=188 Identities=12% Similarity=0.110 Sum_probs=115.2
Q ss_pred CCCCCccEEEEEecCCCCCCC-c-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGPA-N-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
|.+.+.|.||++||..++... | +.+.+.+.++||.++++++|++...+.....-+. .-..+|
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh----------------~G~t~D 133 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH----------------SGETED 133 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec----------------ccchhH
Confidence 456677999999997765544 3 3378899999999999999998765433222110 001234
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhH-HHHHHHHHhcCC-CcceEEEeccCCCCc-------chhh----h-
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGG-ALTLASVLLYPR-KLGGGAIFSGWVPFN-------ASLI----D- 177 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~p~-~~~~~i~~~~~~~~~-------~~~~----~- 177 (251)
+...++++++ . ....++..+|+|+|| +++.+++..-.+ .+.+.+.+|..++.. ..+. +
T Consensus 134 ~~~~l~~l~~-------~-~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r 205 (345)
T COG0429 134 IRFFLDWLKA-------R-FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR 205 (345)
T ss_pred HHHHHHHHHH-------h-CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHH
Confidence 4333443332 2 246789999999999 555555544222 244444454422210 0000 0
Q ss_pred ---------------------------hhc----------------------------------ccCCCCCEEEEccCCC
Q 025550 178 ---------------------------QFT----------------------------------SDAKKTPILWSHGMAD 196 (251)
Q Consensus 178 ---------------------------~~~----------------------------------~~~~~~p~l~~~g~~D 196 (251)
.+. ..++.+|++++++.+|
T Consensus 206 ~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DD 285 (345)
T COG0429 206 YLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDD 285 (345)
T ss_pred HHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCC
Confidence 000 1258899999999999
Q ss_pred CcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-------H--HHHHHHHHHHHHhhcC
Q 025550 197 RTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-------N--EELRNLESWIKTRMSC 248 (251)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-------~--~~~~~~~~~l~~~l~~ 248 (251)
++++.+..-..... ....+.+...+.+||.-+ . -..+.+.+|+..++..
T Consensus 286 P~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 286 PFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCCChhhCCcchhc---CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 99998754433332 345688888888899421 1 1246788998887653
|
|
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-13 Score=96.75 Aligned_cols=183 Identities=17% Similarity=0.189 Sum_probs=119.8
Q ss_pred CccEEEEEec-CCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 38 ARNFILWLHG-LGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 38 ~~~~vv~~HG-~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
....|+++.| .|+...+|..... .+....+.++.+|=|+.+.+..+ ......+-+...
T Consensus 41 G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP--------------------~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 41 GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP--------------------ERKFEVQFFMKD 100 (277)
T ss_pred CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC--------------------cccchHHHHHHh
Confidence 3356777777 4566778888554 44445588899998866543211 001122333333
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh--------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL-------------------- 175 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~-------------------- 175 (251)
.++..++++. ++.+++.|+|+|-||..++..|+++++.+...+..++..-....-
T Consensus 101 a~~avdLM~a-----Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P 175 (277)
T KOG2984|consen 101 AEYAVDLMEA-----LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQP 175 (277)
T ss_pred HHHHHHHHHH-----hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcch
Confidence 4444444443 256799999999999999999999999988888776633221110
Q ss_pred -hhh------------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 176 -IDQ------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 176 -~~~------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
... ....+.++|++++||+.|++++..++. +...+.. -.+++++|
T Consensus 176 ~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~-fi~~~~~---~a~~~~~p 251 (277)
T KOG2984|consen 176 YEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVC-FIPVLKS---LAKVEIHP 251 (277)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCcc-chhhhcc---cceEEEcc
Confidence 000 011368999999999999999877654 3333333 35788899
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 225 GLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 225 g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
.++|.+.....+++..-..++|+++
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhcc
Confidence 9999998776666666666666543
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.6e-13 Score=99.75 Aligned_cols=172 Identities=13% Similarity=0.084 Sum_probs=111.2
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...++|+|||+||+......|..+.+.+++.||.++.+++..... .....+.....+
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------------------~~~~~~~~~~~~ 69 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGG-----------------------PDDTDEVASAAE 69 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCC-----------------------CCcchhHHHHHH
Confidence 456799999999999766668889999999999999988432100 001224455666
Q ss_pred HHHHHHHHHHHHHH--cCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcc------hhhhh-hc
Q 025550 115 AVRNVHAMIDKEVA--AGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNA------SLIDQ-FT 180 (251)
Q Consensus 115 ~~~~l~~~i~~~~~--~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~------~~~~~-~~ 180 (251)
.++|+.+-++..+. ...|..+++|+|||.||-++..++..+ +.++++++++.|.-.... ..... ..
T Consensus 70 vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~ 149 (259)
T PF12740_consen 70 VIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQ 149 (259)
T ss_pred HHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCccc
Confidence 66666654443221 134788999999999999999999887 457999999988653111 11111 11
Q ss_pred ccCCCCCEEEEccCCCCcc------cc-hhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 181 SDAKKTPILWSHGMADRTV------LF-EAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~------~~-~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.-....|++++-..-.... +. -......+.+.+...+.-..+.++.||.
T Consensus 150 s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 150 SFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHM 205 (259)
T ss_pred ccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCch
Confidence 1124599988766555421 11 1122344444555556666777889994
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=110.39 Aligned_cols=124 Identities=12% Similarity=0.023 Sum_probs=80.7
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC---Cc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP---AN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~---~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
.++..+..++..| ...++.|+||++||++.+.. .+ ......|+++||.++.+|+++.+.+...
T Consensus 4 ~DG~~L~~~~~~P------~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~------- 70 (550)
T TIGR00976 4 RDGTRLAIDVYRP------AGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGE------- 70 (550)
T ss_pred CCCCEEEEEEEec------CCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCc-------
Confidence 3455665544442 12347899999999987643 12 2245678889999999999987654211
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..++. .....|+.+.++++ .+......+|+++|+|+||.+++.+|..+|+.+++++..++.
T Consensus 71 ~~~~~----------~~~~~D~~~~i~~l-------~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 71 FDLLG----------SDEAADGYDLVDWI-------AKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred eEecC----------cccchHHHHHHHHH-------HhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 01100 11233333333333 222233469999999999999999999999899999987763
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.5e-13 Score=97.97 Aligned_cols=105 Identities=21% Similarity=0.302 Sum_probs=77.4
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...-|+++++||+|.++-.|..++..+. .....++++|+|++++.-. .+.+.-+.+.
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~----------------------~~e~dlS~eT 128 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKV----------------------ENEDDLSLET 128 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcccc----------------------CChhhcCHHH
Confidence 4567999999999999999999888554 3456678999998866321 1334456667
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEe
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIF 165 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~ 165 (251)
..+++-++++++. +-...+|+|+||||||.++.+.|... |. +.|++.+
T Consensus 129 ~~KD~~~~i~~~f--ge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~vi 178 (343)
T KOG2564|consen 129 MSKDFGAVIKELF--GELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVI 178 (343)
T ss_pred HHHHHHHHHHHHh--ccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEE
Confidence 7788888887654 22456799999999999998887653 44 6666654
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-12 Score=116.27 Aligned_cols=180 Identities=17% Similarity=0.169 Sum_probs=117.8
Q ss_pred CccEEEEEecCCCCCCCchhh-----hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 38 ARNFILWLHGLGDSGPANEPI-----KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
..+.||++||++.+...|... .+.|.++||.++.+|+- .+..+ .+ . ...++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~~~~~----~~------------------~-~~~~l 121 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG-SPDKV----EG------------------G-MERNL 121 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC-CCChh----Hc------------------C-ccCCH
Confidence 457899999999998888764 67888899999999962 22110 00 0 01233
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCcc------------h-----
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFNA------------S----- 174 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~~------------~----- 174 (251)
.+.+..+.+.++.+... ..+++.++||||||.+++.+++.+ +++++++++++...++.. .
T Consensus 122 ~~~i~~l~~~l~~v~~~--~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~ 199 (994)
T PRK07868 122 ADHVVALSEAIDTVKDV--TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFM 199 (994)
T ss_pred HHHHHHHHHHHHHHHHh--hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccc
Confidence 33444455554432212 235799999999999998888755 457898887544321100 0
Q ss_pred ------------------------------------------hh------------hhh---------------------
Q 025550 175 ------------------------------------------LI------------DQF--------------------- 179 (251)
Q Consensus 175 ------------------------------------------~~------------~~~--------------------- 179 (251)
.. ..+
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~ 279 (994)
T PRK07868 200 ADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRM 279 (994)
T ss_pred hhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcc
Confidence 00 000
Q ss_pred ------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEE-EEeCCCCCCC-------CHHHHHHHH
Q 025550 180 ------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF-KAYPGLGHSI-------SNEELRNLE 239 (251)
Q Consensus 180 ------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~~H~~-------~~~~~~~~~ 239 (251)
...++++|+++++|++|.+++++.++.+.+.+.. .++ ..++++||.- ..+.+..+.
T Consensus 280 ~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~----a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~ 355 (994)
T PRK07868 280 MTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN----AEVYESLIRAGHFGLVVGSRAAQQTWPTVA 355 (994)
T ss_pred cCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeEEEEeCCCCCEeeeechhhhhhhChHHH
Confidence 0024678999999999999999987777665543 344 4668889973 355678999
Q ss_pred HHHHHhhc
Q 025550 240 SWIKTRMS 247 (251)
Q Consensus 240 ~~l~~~l~ 247 (251)
+||.++-.
T Consensus 356 ~wl~~~~~ 363 (994)
T PRK07868 356 DWVKWLEG 363 (994)
T ss_pred HHHHHhcc
Confidence 99988753
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-12 Score=95.18 Aligned_cols=107 Identities=18% Similarity=0.229 Sum_probs=82.3
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
|.+.+..+||-+||..++..+|+.+...|.+.|++++.+.|||.+..+. .+.....-.
T Consensus 30 ~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~----------------------~~~~~~~n~ 87 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPG----------------------YPDQQYTNE 87 (297)
T ss_pred CCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCC----------------------CcccccChH
Confidence 3455667999999999999999999999999999999999997654321 122233334
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
+-..++.++++ +.+++ ++++.+|||.|+-.|+.++..+| ..+++++++.
T Consensus 88 er~~~~~~ll~---~l~i~-~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~ 136 (297)
T PF06342_consen 88 ERQNFVNALLD---ELGIK-GKLIFLGHSRGCENALQLAVTHP--LHGLVLINPP 136 (297)
T ss_pred HHHHHHHHHHH---HcCCC-CceEEEEeccchHHHHHHHhcCc--cceEEEecCC
Confidence 44556666666 55665 78999999999999999999996 5677777763
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=107.88 Aligned_cols=108 Identities=10% Similarity=0.060 Sum_probs=68.3
Q ss_pred CCccEEEEEecCCCCCCCch-----hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGDSGPANE-----PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+.||++||+......+. .++++|.++||.++.+|+++.+.. ...+ ...+
T Consensus 186 ~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s---------~~~~--------------~~dd 242 (532)
T TIGR01838 186 VHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDAS---------QADK--------------TFDD 242 (532)
T ss_pred CCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcc---------cccC--------------Chhh
Confidence 35677999999876555443 588899999999999999865431 1111 1111
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHH----HHHHhc-CCCcceEEEeccCCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTL----ASVLLY-PRKLGGGAIFSGWVP 170 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~----~~a~~~-p~~~~~~i~~~~~~~ 170 (251)
+ ..+.+.+.++.+. ...+.+++.++|||+||.++. .++... +++++++++++...+
T Consensus 243 Y--~~~~i~~al~~v~-~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 243 Y--IRDGVIAALEVVE-AITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred h--HHHHHHHHHHHHH-HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 1 1112222222221 112567899999999999852 234444 778999998887554
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-12 Score=98.35 Aligned_cols=188 Identities=14% Similarity=0.145 Sum_probs=117.2
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCccc-----CCCCcCCccccccCCCCCCC-CCC
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTC-----NYGAVMPSWFDIHEIPVTAS-SPK 107 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~w~~~~~~~~~~~-~~~ 107 (251)
+++.+.|+|||.||.|++..-|..++-.++++||.+.++..|+........ ..+....+|........... ..-
T Consensus 113 tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 457899999999999999999999999999999999999988664431111 12333456665544422222 111
Q ss_pred ChhHHHHHHHHHHHHHHH----------------------HHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 108 DESSLLKAVRNVHAMIDK----------------------EVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~----------------------~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
..+.+..-+.++...++- ..+.+++..+++++|||+||..+......+. .+++.|++
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~l 271 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIAL 271 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeee
Confidence 222232223322222211 1134467778999999999998886665554 68999999
Q ss_pred ccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 166 SGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+|.-+-+.. .....+.|++++.-++=. . .++. ...++....+..-..+++.|.-|.
T Consensus 272 D~WM~Pl~~~----~~~~arqP~~finv~~fQ-~-~en~-~vmKki~~~n~g~~~it~~GsVHq 328 (399)
T KOG3847|consen 272 DAWMFPLDQL----QYSQARQPTLFINVEDFQ-W-NENL-LVMKKIESQNEGNHVITLDGSVHQ 328 (399)
T ss_pred eeeecccchh----hhhhccCCeEEEEccccc-c-hhHH-HHHHhhhCCCccceEEEEccceec
Confidence 9988654332 223467999999843221 1 2222 233444444444577788888884
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.8e-13 Score=101.09 Aligned_cols=148 Identities=20% Similarity=0.246 Sum_probs=99.0
Q ss_pred cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHH
Q 025550 67 FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGA 146 (251)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~ 146 (251)
|.++.+|.||.+.+. +.|. .........+..+.+..+++ ..+ .+++.++||||||.
T Consensus 1 f~vi~~d~rG~g~S~---------~~~~----------~~~~~~~~~~~~~~~~~~~~---~l~--~~~~~~vG~S~Gg~ 56 (230)
T PF00561_consen 1 FDVILFDLRGFGYSS---------PHWD----------PDFPDYTTDDLAADLEALRE---ALG--IKKINLVGHSMGGM 56 (230)
T ss_dssp EEEEEEECTTSTTSS---------SCCG----------SGSCTHCHHHHHHHHHHHHH---HHT--TSSEEEEEETHHHH
T ss_pred CEEEEEeCCCCCCCC---------CCcc----------CCcccccHHHHHHHHHHHHH---HhC--CCCeEEEEECCChH
Confidence 568899999875542 1010 01122334444444444444 334 34599999999999
Q ss_pred HHHHHHHhcCCCcceEEEeccCC--C--C-cchhhh-----h--------------------------------------
Q 025550 147 LTLASVLLYPRKLGGGAIFSGWV--P--F-NASLID-----Q-------------------------------------- 178 (251)
Q Consensus 147 ~a~~~a~~~p~~~~~~i~~~~~~--~--~-~~~~~~-----~-------------------------------------- 178 (251)
+++.++..+|+++++++++++.. . . ...... .
T Consensus 57 ~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (230)
T PF00561_consen 57 LALEYAAQYPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQ 136 (230)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHCchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhc
Confidence 99999999999999999998851 0 0 000000 0
Q ss_pred --------------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 179 --------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 179 --------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
.....+++|+++++|++|.++|++.+..+.+.+. ..++++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~ 212 (230)
T PF00561_consen 137 FQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGS 212 (230)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTC
T ss_pred cchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCC
Confidence 0012589999999999999999987665444443 3789999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 025550 227 GHSISNEELRNLESWI 242 (251)
Q Consensus 227 ~H~~~~~~~~~~~~~l 242 (251)
||....+..+.+.+-|
T Consensus 213 GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 213 GHFAFLEGPDEFNEII 228 (230)
T ss_dssp CSTHHHHSHHHHHHHH
T ss_pred ChHHHhcCHHhhhhhh
Confidence 9998877776666554
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-12 Score=112.01 Aligned_cols=173 Identities=17% Similarity=0.126 Sum_probs=119.5
Q ss_pred hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHH----H----HHHHc
Q 025550 58 IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMI----D----KEVAA 129 (251)
Q Consensus 58 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i----~----~~~~~ 129 (251)
+.++|..+||.++.+|.+|.+.+.. .| .. .......+..+.++++.... + ..++.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG---------~~-~~-------~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq 333 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDG---------CP-TT-------GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKA 333 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCC---------cC-cc-------CCHHHHHHHHHHHHHHhhCCcccccccccccccc
Confidence 5568899999999999998755321 11 00 01234455666666665310 0 00011
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--------------------h--------------
Q 025550 130 GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------------------L-------------- 175 (251)
Q Consensus 130 ~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------------------~-------------- 175 (251)
.....+|+++|.|+||.+++.+|...|+.++++|..++....... +
T Consensus 334 ~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~ 413 (767)
T PRK05371 334 DWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDY 413 (767)
T ss_pred CCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchh
Confidence 223579999999999999999999988899999988764321100 0
Q ss_pred ------hh-----------h---------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 176 ------ID-----------Q---------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 176 ------~~-----------~---------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
.+ . ....++++|+|+++|..|..+++.++.++++.+++.+.+.++.+.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~ 493 (767)
T PRK05371 414 LRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH 493 (767)
T ss_pred hcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe
Confidence 00 0 001248899999999999999999888999999998888899888
Q ss_pred CCCCCCCC-----HHHHHHHHHHHHHhhcC
Q 025550 224 PGLGHSIS-----NEELRNLESWIKTRMSC 248 (251)
Q Consensus 224 ~g~~H~~~-----~~~~~~~~~~l~~~l~~ 248 (251)
++ +|... .+..+.+.+||..+|+.
T Consensus 494 ~g-~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 494 QG-GHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred CC-CccCCCchhHHHHHHHHHHHHHhcccc
Confidence 76 89643 13367789999999874
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=105.55 Aligned_cols=125 Identities=23% Similarity=0.348 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--------------hhhhh-
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------------LIDQF- 179 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------------~~~~~- 179 (251)
..++|...|+. +..+..++.+|+|+||||..|+.++.++|+.+.+++++||....... .....
T Consensus 98 l~~el~p~i~~--~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 175 (251)
T PF00756_consen 98 LTEELIPYIEA--NYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIK 175 (251)
T ss_dssp HHTHHHHHHHH--HSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHH
T ss_pred hhccchhHHHH--hcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhh
Confidence 34556666554 55555555899999999999999999999999999999986443210 00001
Q ss_pred --cccCCCCCEEEEccCCCCcccc----------hhcccchHHHHhcCCeeEEEEeCCCCCCC--CHHHHHHHHHHH
Q 025550 180 --TSDAKKTPILWSHGMADRTVLF----------EAGQAGPPFLEQAGISCEFKAYPGLGHSI--SNEELRNLESWI 242 (251)
Q Consensus 180 --~~~~~~~p~l~~~g~~D~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~g~~H~~--~~~~~~~~~~~l 242 (251)
.......++++.+|+.|..... ...+.+.+.++..+.+..++.++| +|.. +...+.+.+.|+
T Consensus 176 ~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~G-~H~~~~W~~~l~~~L~~~ 251 (251)
T PF00756_consen 176 ALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFPG-GHDWAYWRRRLPDALPWM 251 (251)
T ss_dssp HHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEHS-ESSHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEecC-ccchhhHHHHHHHHHhhC
Confidence 1234667889999999984321 122334444555677888899996 8875 456666666664
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-11 Score=82.53 Aligned_cols=170 Identities=17% Similarity=0.182 Sum_probs=106.1
Q ss_pred CCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+.+....+||+-||.|.+-. .....+..|+..|+.+..+.||-.-.++. |. ...+.....
T Consensus 9 pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrt----g~--------------rkPp~~~~t 70 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRT----GR--------------RKPPPGSGT 70 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccc----cC--------------CCCcCcccc
Confidence 45566679999999886543 45557889999999999999984433211 10 000111111
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc---ccCCCCCE
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT---SDAKKTPI 188 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~p~ 188 (251)
.... ++...++ + ..+.+..++++-|+||||.++.+++...--.+.++++++-.+-..... +... ...+++|+
T Consensus 71 ~~~~--~~~~~aq-l-~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP-e~~Rt~HL~gl~tPt 145 (213)
T COG3571 71 LNPE--YIVAIAQ-L-RAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP-EQLRTEHLTGLKTPT 145 (213)
T ss_pred CCHH--HHHHHHH-H-HhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc-ccchhhhccCCCCCe
Confidence 1111 1111111 1 334566789999999999999988876555588888775433222111 1111 23488999
Q ss_pred EEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 189 LWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 189 l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
++.+|+.|.+=..+.+ .... ...+.+++.++++.|.+.
T Consensus 146 li~qGtrD~fGtr~~V---a~y~--ls~~iev~wl~~adHDLk 183 (213)
T COG3571 146 LITQGTRDEFGTRDEV---AGYA--LSDPIEVVWLEDADHDLK 183 (213)
T ss_pred EEeecccccccCHHHH---Hhhh--cCCceEEEEeccCccccc
Confidence 9999999998665543 1111 234689999999999874
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=100.63 Aligned_cols=114 Identities=17% Similarity=0.202 Sum_probs=80.0
Q ss_pred CCCccEEEEEecCCCCC-CCchh-hhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEP-IKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|++|++||++++. ..|.. +.+ ++...++.++.+|+++.... .+ .......
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~-----------~y------------~~a~~~~ 89 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP-----------NY------------PQAVNNT 89 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc-----------Ch------------HHHHHhH
Confidence 45678999999999887 55554 454 45557899999999854110 00 1111223
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
....+.+..+++.+. ..+++.+++.|+|||+||.++..++.+.|++++.++++.+..+..
T Consensus 90 ~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 90 RVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 333445555555544 335677899999999999999999999999999999998876654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.8e-12 Score=96.69 Aligned_cols=182 Identities=20% Similarity=0.214 Sum_probs=74.9
Q ss_pred CccEEEEEecCCCC---CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDS---GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+..+|||+.|.+.. -.....+++.+...+|.++.+.+..+ ..| | ...++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSS-------y~G-----~--------------G~~SL~~ 85 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSS-------YSG-----W--------------GTSSLDR 85 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGG-------BTT-----S---------------S--HHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCc-------cCC-----c--------------Ccchhhh
Confidence 66789999998853 23344588889888999998887632 112 2 2345566
Q ss_pred HHHHHHHHHHHHHHcC---CCCCcEEEEEeChhHHHHHHHHHhcC-----CCcceEEEeccCCCCcch---------hhh
Q 025550 115 AVRNVHAMIDKEVAAG---IDPNNVFVCGFSQGGALTLASVLLYP-----RKLGGGAIFSGWVPFNAS---------LID 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~~~~~~i~~~~~~~~~~~---------~~~ 177 (251)
.+++|.++++.+.... ...++|+|+|||-|+.-++.++.... ..+.++|+.+|..+.... +.+
T Consensus 86 D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~ 165 (303)
T PF08538_consen 86 DVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEE 165 (303)
T ss_dssp HHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHH
T ss_pred HHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHH
Confidence 6666666666665331 25789999999999999999887753 469999999884432110 000
Q ss_pred h-------------------------h-----c----------------------c-------cCCCCCEEEEccCCCCc
Q 025550 178 Q-------------------------F-----T----------------------S-------DAKKTPILWSHGMADRT 198 (251)
Q Consensus 178 ~-------------------------~-----~----------------------~-------~~~~~p~l~~~g~~D~~ 198 (251)
. . . . ..+..|+|++.+++|+.
T Consensus 166 ~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEy 245 (303)
T PF08538_consen 166 LVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEY 245 (303)
T ss_dssp HHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-
T ss_pred HHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCce
Confidence 0 0 0 0 13678999999999999
Q ss_pred ccch-hcccchHHHHhcCC----eeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 199 VLFE-AGQAGPPFLEQAGI----SCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 199 ~~~~-~~~~~~~~l~~~~~----~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
+|.. +.+++.++++++-. ...--++||++|.+..+..+...+||.++
T Consensus 246 vP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~r 297 (303)
T PF08538_consen 246 VPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVER 297 (303)
T ss_dssp ----------------------------------------------------
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9863 34456666665422 22345789999999866655544554443
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-12 Score=103.97 Aligned_cols=214 Identities=15% Similarity=0.167 Sum_probs=147.0
Q ss_pred eEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCC--CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC
Q 025550 9 LFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGD--SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
.+...+.++..+..|++. ... +.+ +.|++|+--|+-. .-..|......+.++|...+.-..||.
T Consensus 396 Q~~atSkDGT~IPYFiv~--K~~--~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGG--------- 461 (648)
T COG1505 396 QFFATSKDGTRIPYFIVR--KGA--KKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGG--------- 461 (648)
T ss_pred EEEEEcCCCccccEEEEe--cCC--cCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccC---------
Confidence 345667888888877775 222 123 5677665554332 223455555777778888888888865
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCC-CCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
|+-++.|...... ..-++..++..++.+.+++.++ .++++++.|-|.||.++..+..++|+.+.++++-
T Consensus 462 GEfGp~WH~Aa~k----------~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~e 531 (648)
T COG1505 462 GEFGPEWHQAGMK----------ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCE 531 (648)
T ss_pred CccCHHHHHHHhh----------hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeec
Confidence 3445677543321 2223334455555555555565 6789999999999999999999999999999987
Q ss_pred ccCCCCcch-----------------------------hhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCC
Q 025550 166 SGWVPFNAS-----------------------------LIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216 (251)
Q Consensus 166 ~~~~~~~~~-----------------------------~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~ 216 (251)
.|.+++-.- ..+.+++...-.|+|+..+.+|..|.+.++++++.+|++.+.
T Consensus 532 vPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~ 611 (648)
T COG1505 532 VPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA 611 (648)
T ss_pred cchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC
Confidence 774432110 011222335678999999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCCC------HHHHHHHHHHHHHhh
Q 025550 217 SCEFKAYPGLGHSIS------NEELRNLESWIKTRM 246 (251)
Q Consensus 217 ~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l 246 (251)
++-+.+-.++||.-. .++...+..||.+.|
T Consensus 612 pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 612 PVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred ceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 988888888899754 233566777887766
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-12 Score=90.16 Aligned_cols=178 Identities=12% Similarity=0.121 Sum_probs=117.9
Q ss_pred CCCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
....+++||+||+-....+ -...+....+.||++.+++|-.++.. ..+
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~-----------------------------htL 114 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQV-----------------------------HTL 114 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCccc-----------------------------ccH
Confidence 3456899999997644333 33356677789999999998655431 123
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCcchhhhh-------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFNASLIDQ------------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~~~~~~~------------- 178 (251)
.+.+.++..-++.+++.--..+++.+.|||.|+.+++.+..+. ..++.|+++++|.....+-....
T Consensus 115 ~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae 194 (270)
T KOG4627|consen 115 EQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAE 194 (270)
T ss_pred HHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhh
Confidence 3333333333333332333567899999999999999887763 34699999999866432211000
Q ss_pred ------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----HHHHHHHHHHhh
Q 025550 179 ------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----LRNLESWIKTRM 246 (251)
Q Consensus 179 ------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l 246 (251)
..-...+.|++++.+++|..--.++.+.+...++++ .+..|++.+|.-..++ -.+...|+++.+
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a----~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA----SFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc----ceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 011247789999999999877788888999988874 8889999999754333 234556666554
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-11 Score=99.24 Aligned_cols=114 Identities=14% Similarity=0.115 Sum_probs=77.9
Q ss_pred CCCccEEEEEecCCCCC--CCchh-hhhhhc--CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSG--PANEP-IKTLFT--SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
+...|++|++||++.+. ..|.. +++.+. ...+.++++|+++++.... .....
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y-----------------------~~a~~ 94 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY-----------------------PTSAA 94 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC-----------------------ccccc
Confidence 35679999999998754 34554 555432 2369999999997643210 00111
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 111 SLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
......+.+.++++.+. ..+++.+++.|+||||||.++..++...|+++..++++.|..+..
T Consensus 95 ~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 95 YTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTF 157 (442)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCcc
Confidence 11223344445555443 345677899999999999999999999999999999999876643
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.9e-13 Score=102.85 Aligned_cols=170 Identities=15% Similarity=0.146 Sum_probs=85.0
Q ss_pred CCCccEEEEEecCCCCCCC--------------c----hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcccccc
Q 025550 36 PMARNFILWLHGLGDSGPA--------------N----EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~--------------~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~ 97 (251)
..+.|+||++||-|+.++. + ..++..|+++||.++++|.++.+++........
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~--------- 182 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQ--------- 182 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTT---------
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccccccccc---------
Confidence 5788999999997643211 1 114668999999999999987766422110000
Q ss_pred CCCCCCCCCCChhHHHHH------------HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE
Q 025550 98 EIPVTASSPKDESSLLKA------------VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI 164 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~------------~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~ 164 (251)
....+...+... .-+....++.+. +..+|.+||+++|+||||..++.+++..+ +|++.++
T Consensus 183 ------~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~ 255 (390)
T PF12715_consen 183 ------GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVA 255 (390)
T ss_dssp ------TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEE
T ss_pred ------ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhh
Confidence 000011111110 111223444444 67789999999999999999999998887 5777764
Q ss_pred eccCCCCcchh---------------hh----------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHh
Q 025550 165 FSGWVPFNASL---------------ID----------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213 (251)
Q Consensus 165 ~~~~~~~~~~~---------------~~----------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~ 213 (251)
. +++....+. .. .+.......|+++..|..|..++. .+..++...
T Consensus 256 ~-~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~~- 331 (390)
T PF12715_consen 256 N-GYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIMG- 331 (390)
T ss_dssp E-S-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHTT-
T ss_pred h-hhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhcC-
Confidence 3 333211110 00 011123678999999999998764 233333322
Q ss_pred cCCeeEEEEeCC
Q 025550 214 AGISCEFKAYPG 225 (251)
Q Consensus 214 ~~~~~~~~~~~g 225 (251)
+..+++++.||+
T Consensus 332 ~p~n~~~~~~p~ 343 (390)
T PF12715_consen 332 APDNFQIHHYPK 343 (390)
T ss_dssp -GGGEEE---GG
T ss_pred CCcceEEeeccc
Confidence 233488888886
|
|
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.8e-12 Score=96.81 Aligned_cols=67 Identities=25% Similarity=0.344 Sum_probs=60.3
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcC-CeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhhcCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAG-ISCEFKAYPGLGHSIS-NEELRNLESWIKTRMSCSS 250 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~~ 250 (251)
.+.|+++.+|..|.++|....+++++++.+.| .+++++.+++.+|... .......++||.+++..++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCCC
Confidence 47899999999999999999999999999999 7999999999999765 4557889999999998765
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2e-11 Score=94.30 Aligned_cols=170 Identities=17% Similarity=0.177 Sum_probs=109.4
Q ss_pred CCCCCccEEEEEecCCCCCCCchhh----------hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPI----------KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA 103 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~ 103 (251)
+...+.|+||..|+++......... ...|.++||.++.+|.|+.+.+. ..|...
T Consensus 15 ~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~---------G~~~~~------- 78 (272)
T PF02129_consen 15 DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSE---------GEFDPM------- 78 (272)
T ss_dssp TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS----------S-B-TT-------
T ss_pred CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCC---------CccccC-------
Confidence 4677899999999999543111111 11288999999999999875532 222110
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh------
Q 025550 104 SSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------ 177 (251)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------ 177 (251)
...+..|..++++++. .......+|+++|.|++|..++.+|...|..+++++..++..+.......
T Consensus 79 -~~~e~~D~~d~I~W~~-------~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~ 150 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIA-------AQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFR 150 (272)
T ss_dssp -SHHHHHHHHHHHHHHH-------HCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEB
T ss_pred -ChhHHHHHHHHHHHHH-------hCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccc
Confidence 0122334444444443 33455679999999999999999999888899999998875543321000
Q ss_pred -----hh-----------------------------------------------------------------cccCCCCC
Q 025550 178 -----QF-----------------------------------------------------------------TSDAKKTP 187 (251)
Q Consensus 178 -----~~-----------------------------------------------------------------~~~~~~~p 187 (251)
.. ...++++|
T Consensus 151 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP 230 (272)
T PF02129_consen 151 LGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVP 230 (272)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SE
T ss_pred ccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCC
Confidence 00 01258899
Q ss_pred EEEEccCCCCcccchhcccchHHHHhcC-CeeEEEEeCCCCCC
Q 025550 188 ILWSHGMADRTVLFEAGQAGPPFLEQAG-ISCEFKAYPGLGHS 229 (251)
Q Consensus 188 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~-~~~~~~~~~g~~H~ 229 (251)
+|++.|..|..+. ..+...++.+++.+ .+.++++-|. +|.
T Consensus 231 ~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 231 VLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp EEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred EEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 9999999996666 67777888998887 6778998886 785
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-10 Score=90.44 Aligned_cols=184 Identities=15% Similarity=0.137 Sum_probs=114.4
Q ss_pred CCCccEEEEEecCCCCCCC-c-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDSGPA-N-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~-~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
....|+||++||..+++.. | +.++...++.||.++++..+|++....++..= |. -...+|+.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~------f~----------ag~t~Dl~ 185 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL------FT----------AGWTEDLR 185 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce------ee----------cCCHHHHH
Confidence 4577999999997765443 3 33777888999999999999876654443211 11 11234444
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCC--cchhhhh---------h
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPF--NASLIDQ---------F 179 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~--~~~~~~~---------~ 179 (251)
.+++.++. ..+..++..+|+||||.+.+.+..+..+ ..+|++..+||-.. ...+... +
T Consensus 186 ~~v~~i~~--------~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l 257 (409)
T KOG1838|consen 186 EVVNHIKK--------RYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRAL 257 (409)
T ss_pred HHHHHHHH--------hCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHH
Confidence 44444432 3355689999999999999988877543 35555655665431 1100000 0
Q ss_pred -----------------------------------------------------------cccCCCCCEEEEccCCCCccc
Q 025550 180 -----------------------------------------------------------TSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 180 -----------------------------------------------------------~~~~~~~p~l~~~g~~D~~~~ 200 (251)
...++++|++.+++.+|+++|
T Consensus 258 ~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p 337 (409)
T KOG1838|consen 258 TLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVP 337 (409)
T ss_pred HHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCC
Confidence 012589999999999999999
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCH--------HHHHH-HHHHHHHhh
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--------EELRN-LESWIKTRM 246 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--------~~~~~-~~~~l~~~l 246 (251)
.+. .-.+..++ +..+-+.+-.-+||.-+. ...++ +.+|+....
T Consensus 338 ~~~--ip~~~~~~-np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 338 EEA--IPIDDIKS-NPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ccc--CCHHHHhc-CCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHH
Confidence 762 22334444 345666666767994221 12455 666666554
|
|
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=7e-11 Score=91.65 Aligned_cols=208 Identities=19% Similarity=0.204 Sum_probs=127.2
Q ss_pred CCCccEEEEEecCCCCCCCchhhhh---hhcCCCcceEEEEcc-CCCCCCccc--CCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKT---LFTSPEFKLTKWSFP-SAPNNPVTC--NYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~---~~~~~g~~~~~~~~~-~~~~~~~~~--~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+++++||..++...+..+.. .....|+.++..|.. .......+. ..| ...+||....+..-...+.+.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G-~~~sfY~d~~~~~~~~~~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLG-GGASFYSDWTQPPWASGPYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCC-CccceecccccCccccCccch
Confidence 5788999999999988755544333 333445544443211 111111110 001 112333322221000111222
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCC--CcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDP--NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------- 178 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------- 178 (251)
+++ .+.+|...+.+ ....+. ++.+|+||||||+-|+.+|+++|++++.+.+++|.+.........
T Consensus 130 ~tf--l~~ELP~~~~~--~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~ 205 (316)
T COG0627 130 ETF--LTQELPALWEA--AFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGG 205 (316)
T ss_pred hHH--HHhhhhHHHHH--hcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccC
Confidence 222 23345444442 233333 378999999999999999999999999999999977655111000
Q ss_pred -----------------------h---cccC---------CCCCEEEEccCCCCccc--chhcccchHHHHhcCCeeEEE
Q 025550 179 -----------------------F---TSDA---------KKTPILWSHGMADRTVL--FEAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 179 -----------------------~---~~~~---------~~~p~l~~~g~~D~~~~--~~~~~~~~~~l~~~~~~~~~~ 221 (251)
. .... ...++++-+|..|.+.. ....+.+.+++++.|.+.++.
T Consensus 206 ~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~ 285 (316)
T COG0627 206 KAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVR 285 (316)
T ss_pred ccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceee
Confidence 0 0011 44678888999998764 344678899999999998988
Q ss_pred EeCCCCCCC--CHHHHHHHHHHHHHhhcC
Q 025550 222 AYPGLGHSI--SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 222 ~~~g~~H~~--~~~~~~~~~~~l~~~l~~ 248 (251)
..++.+|.+ ....+++...|+.+.|..
T Consensus 286 ~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 286 DQPGGDHSWYFWASQLADHLPWLAGALGL 314 (316)
T ss_pred eCCCCCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 888889975 477899999999998864
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.8e-10 Score=81.33 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc---------c----
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT---------S---- 181 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~---------~---- 181 (251)
+++.+.+.+..+...+. .++++|+|.|+||+.|.+++.++. +++|+ +.|.+.+...+...+. .
T Consensus 42 a~~~l~~~i~~~~~~~~-~~~~~liGSSLGGyyA~~La~~~g--~~aVL-iNPAv~P~~~L~~~ig~~~~y~~~~~~h~~ 117 (180)
T PRK04940 42 DMQHLLKEVDKMLQLSD-DERPLICGVGLGGYWAERIGFLCG--IRQVI-FNPNLFPEENMEGKIDRPEEYADIATKCVT 117 (180)
T ss_pred HHHHHHHHHHHhhhccC-CCCcEEEEeChHHHHHHHHHHHHC--CCEEE-ECCCCChHHHHHHHhCCCcchhhhhHHHHH
Confidence 34455555543221111 247999999999999999999986 56555 7776655432222111 0
Q ss_pred ---cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHH
Q 025550 182 ---DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIK 243 (251)
Q Consensus 182 ---~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 243 (251)
....-..+++..+.|++.++..+ .+.+.. -.+.++.+|++|.|. .+..+.|.+|+.
T Consensus 118 eL~~~~p~r~~vllq~gDEvLDyr~a---~~~y~~---~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 118 NFREKNRDRCLVILSRNDEVLDSQRT---AEELHP---YYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred HhhhcCcccEEEEEeCCCcccCHHHH---HHHhcc---CceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 12344568999999999987743 344433 125788999999986 556788998874
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.5e-11 Score=89.18 Aligned_cols=196 Identities=13% Similarity=0.076 Sum_probs=117.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhc-CCCcceE--EEEccCCCCCCcccCCCC-cCCccccccCCCCCCCCCCCh-hHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFT-SPEFKLT--KWSFPSAPNNPVTCNYGA-VMPSWFDIHEIPVTASSPKDE-SSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~g~-~~~~w~~~~~~~~~~~~~~~~-~~~ 112 (251)
..-..||+||++++...+..+++.+. +.|...- .+..-..+.. .. .|. ....-.+... ....... .+.
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v--~~-~G~~~~~~~nPiIq----V~F~~n~~~~~ 82 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKV--KV-SGKLSKNAKNPIIQ----VNFEDNRNANY 82 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEE--EE-ES---TT-SS-EEE----EEESSTT-CHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeE--EE-eeecCCCCCCCEEE----EEecCCCcCCH
Confidence 44568999999999999999999886 6666442 2222111110 00 010 0000000000 0012222 578
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcchh-----------
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNASL----------- 175 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~~----------- 175 (251)
.....++..++..+. +++ -+++-++||||||..+..++..+.. .+..+|.+++.+......
T Consensus 83 ~~qa~wl~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~ 160 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNK 160 (255)
T ss_dssp HHHHHHHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CST
T ss_pred HHHHHHHHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcc
Confidence 888999999998886 445 4699999999999999998887532 478888888855432111
Q ss_pred ---------hhhh-----cccCCCCCEEEEccC------CCCcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCCH-
Q 025550 176 ---------IDQF-----TSDAKKTPILWSHGM------ADRTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSISN- 232 (251)
Q Consensus 176 ---------~~~~-----~~~~~~~p~l~~~g~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~~- 232 (251)
...+ ..-.....+|-+.|+ .|..||...++.+...++.....++-.+++| +.|.--.
T Consensus 161 ~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lhe 240 (255)
T PF06028_consen 161 NGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHE 240 (255)
T ss_dssp T-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGC
T ss_pred cCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCC
Confidence 0011 112356789999998 7999999999988888888767788888876 4686432
Q ss_pred --HHHHHHHHHH
Q 025550 233 --EELRNLESWI 242 (251)
Q Consensus 233 --~~~~~~~~~l 242 (251)
+..+.|.+||
T Consensus 241 N~~V~~~I~~FL 252 (255)
T PF06028_consen 241 NPQVDKLIIQFL 252 (255)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 2234444444
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.6e-11 Score=88.45 Aligned_cols=176 Identities=16% Similarity=0.179 Sum_probs=105.0
Q ss_pred CCCCccEEEEEecCC--CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLG--DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
...++|++++.||-. .+..-++.+...+.+....-.++...+..+. ...+ ..........
T Consensus 94 ~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~---------~~R~---------~~~~~n~~~~ 155 (299)
T COG2382 94 PLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDV---------KKRR---------EELHCNEAYW 155 (299)
T ss_pred ccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCH---------HHHH---------HHhcccHHHH
Confidence 557899999999843 3344444455556555555554444322110 0000 0001223334
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh----------hhhhccc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL----------IDQFTSD 182 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~----------~~~~~~~ 182 (251)
....++|...++......-+.+.-+|+|.|+||.+++++++.+|+.|..|++.||........ .......
T Consensus 156 ~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~ 235 (299)
T COG2382 156 RFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAI 235 (299)
T ss_pred HHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhhhhhhcc
Confidence 444555555555432111245677999999999999999999999999999999966533211 1111111
Q ss_pred CCCCCEEEEcc-CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 183 AKKTPILWSHG-MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 183 ~~~~p~l~~~g-~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.....+.+..| +.+.+++ ..+++++.|++.+.++.+.+|+| ||.+.
T Consensus 236 ~~~~~~~l~~g~~~~~~~~--pNr~L~~~L~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 236 GTDERIVLTTGGEEGDFLR--PNRALAAQLEKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred CccceEEeecCCccccccc--hhHHHHHHHHhcCCcceeeecCC-CCchh
Confidence 11222333333 3344444 44579999999999999999998 99764
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.6e-10 Score=79.88 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=81.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------hhhc
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI-------DQFT 180 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~-------~~~~ 180 (251)
+...+.+.++.+.+.+.. -.++++|++||+|+..+..++.+....++|+++++|.-....... ....
T Consensus 39 ~~P~~~dWi~~l~~~v~a------~~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p 112 (181)
T COG3545 39 EAPVLDDWIARLEKEVNA------AEGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIP 112 (181)
T ss_pred CCCCHHHHHHHHHHHHhc------cCCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCc
Confidence 344555556666665542 245699999999999999999887778999999999664332211 1222
Q ss_pred ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 181 SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.....-|.+++...+|+.++++.++.+.+.+.. .++....+||..
T Consensus 113 ~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs-----~lv~~g~~GHiN 157 (181)
T COG3545 113 REPLPFPSVVVASRNDPYVSYEHAEDLANAWGS-----ALVDVGEGGHIN 157 (181)
T ss_pred cccCCCceeEEEecCCCCCCHHHHHHHHHhccH-----hheecccccccc
Confidence 344677999999999999999998888888866 566666677754
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-10 Score=86.98 Aligned_cols=177 Identities=12% Similarity=0.171 Sum_probs=112.4
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.|+++|+.+++...|..+++.+....+.++.+.+|+.... .....++.+.++..
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~-------------------------~~~~~si~~la~~y 55 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDD-------------------------EPPPDSIEELASRY 55 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTT-------------------------SHEESSHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCC-------------------------CCCCCCHHHHHHHH
Confidence 46899999999999999999988755477777777754210 12234555556666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcchhh-------h----h-------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNASLI-------D----Q------- 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~~~~-------~----~------- 178 (251)
.+.|.. .. +..++.|+|||+||.+|+.+|.+. ...+..++++.++.+...... . .
T Consensus 56 ~~~I~~---~~-~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (229)
T PF00975_consen 56 AEAIRA---RQ-PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGT 131 (229)
T ss_dssp HHHHHH---HT-SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHH
T ss_pred HHHhhh---hC-CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCC
Confidence 555553 22 334899999999999999999764 334788888887655321000 0 0
Q ss_pred ---------------------------hcccC---CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 179 ---------------------------FTSDA---KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 179 ---------------------------~~~~~---~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
..... ...|..+.....|.......-....++-+-....++++.++| +|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H 210 (229)
T PF00975_consen 132 PDASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DH 210 (229)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ET
T ss_pred chhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CC
Confidence 00001 134678888888877654422222223333345688999997 99
Q ss_pred CCCH-HHHHHHHHHHHHhh
Q 025550 229 SISN-EELRNLESWIKTRM 246 (251)
Q Consensus 229 ~~~~-~~~~~~~~~l~~~l 246 (251)
.... +...++.+.|.+.|
T Consensus 211 ~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 211 FSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TGHHSTTHHHHHHHHHHHH
T ss_pred cEecchHHHHHHHHHhccC
Confidence 7644 46777777777654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=5e-11 Score=84.56 Aligned_cols=193 Identities=15% Similarity=0.100 Sum_probs=108.1
Q ss_pred CCCCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC-CCCCCh
Q 025550 34 QNPMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA-SSPKDE 109 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~-~~~~~~ 109 (251)
+.+++.|+++++-|...+..++.. +.+....+|+.++.+|- ..+..... |. ..+|.--...+-.. ......
T Consensus 39 ~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDT---SPRG~~v~-g~-~eswDFG~GAGFYvnAt~epw 113 (283)
T KOG3101|consen 39 PRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDT---SPRGVEVA-GD-DESWDFGQGAGFYVNATQEPW 113 (283)
T ss_pred ccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCC---CCCccccC-CC-cccccccCCceeEEecccchH
Confidence 355668999999999999888766 23344456766655543 22222211 11 12331100000000 001112
Q ss_pred hHHHHHHHHHHHHHHHHH---HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------
Q 025550 110 SSLLKAVRNVHAMIDKEV---AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------ 174 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------ 174 (251)
..-.++.+++.+-+..++ ...+|..+++|.||||||.-|+-.++++|.+++.+-+++|...+..-
T Consensus 114 ~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG 193 (283)
T KOG3101|consen 114 AKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLG 193 (283)
T ss_pred hhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccC
Confidence 222233333333333222 23468889999999999999999999999998888877774432110
Q ss_pred ----hhhhhc-------ccCCCCCEEEEccCCCCcccchh-cccchHHHHhc-CCeeEEEEeCCCCCCCC
Q 025550 175 ----LIDQFT-------SDAKKTPILWSHGMADRTVLFEA-GQAGPPFLEQA-GISCEFKAYPGLGHSIS 231 (251)
Q Consensus 175 ----~~~~~~-------~~~~~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~-~~~~~~~~~~g~~H~~~ 231 (251)
..+.+. -.....-+|+-.|+.|.+..-+. -+.+.++.+.. ..++.++..+|-+|.+.
T Consensus 194 ~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 194 DNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYY 263 (283)
T ss_pred CChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCccee
Confidence 011110 12245669999999999877221 11233333322 25688889999999754
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.9e-11 Score=91.53 Aligned_cols=178 Identities=15% Similarity=0.138 Sum_probs=106.8
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccC-CCC---cCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN-YGA---VMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~g~---~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+|++-||.|+...+|..+++.+++.||.|..++.|+.-....+.. .|. ....|+ ....++
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~------------erp~di 136 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWW------------ERPLDI 136 (365)
T ss_pred CcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhh------------cccccH
Confidence 4789999999999999999999999999999999999886422111110 010 111121 123344
Q ss_pred HHHHHHHHHHHHHH-HHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----------------------------------
Q 025550 113 LKAVRNVHAMIDKE-VAAGIDPNNVFVCGFSQGGALTLASVLLYPR---------------------------------- 157 (251)
Q Consensus 113 ~~~~~~l~~~i~~~-~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---------------------------------- 157 (251)
...++.|.+.-..= ++..++.++|+++|||+||+.++.++....+
T Consensus 137 s~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~ 216 (365)
T COG4188 137 SALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWL 216 (365)
T ss_pred HHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhcccccccc
Confidence 44444444330000 1345688999999999999999987754321
Q ss_pred ----------CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhc-ccchHHHHhcCCeeEEEEeCCC
Q 025550 158 ----------KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAG-QAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 158 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~-~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
++++++.+.|.....-. .....+.+.|++++.|..|...|...- ..-...+. +....+.+.+++
T Consensus 217 ~~~~~~~rDpriravvA~~p~~~~~Fg---~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~--g~~k~~~~vp~a 291 (365)
T COG4188 217 PRQAYDLRDPRIRAVVAINPALGMIFG---TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLP--GALKYLRLVPGA 291 (365)
T ss_pred chhhhccccccceeeeeccCCcccccc---cccceeeecceeeecccccccCCcccccccccccCC--cchhheeecCCC
Confidence 12333333332221111 111235789999999999997665431 22222232 233567788999
Q ss_pred CCCCC
Q 025550 227 GHSIS 231 (251)
Q Consensus 227 ~H~~~ 231 (251)
.|.-.
T Consensus 292 ~h~sf 296 (365)
T COG4188 292 THFSF 296 (365)
T ss_pred ccccc
Confidence 99654
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-10 Score=95.87 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=107.2
Q ss_pred CCCccEEEEEecCCCCCCCc-----hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSGPAN-----EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
...+..||+++.+-.....+ +.+++++.++|+.++.++..... ...+.| ..+
T Consensus 212 ~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~---------~~~r~~--------------~ld 268 (560)
T TIGR01839 212 QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPD---------KAHREW--------------GLS 268 (560)
T ss_pred CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCC---------hhhcCC--------------CHH
Confidence 34455677788765322222 34888999999999999987421 111111 223
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHH----HHHhcCC-CcceEEEeccCCCCcchh----------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLA----SVLLYPR-KLGGGAIFSGWVPFNASL---------- 175 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~a~~~p~-~~~~~i~~~~~~~~~~~~---------- 175 (251)
++ ++.+.+.++... .....++|.++|+|+||.++.. ++++.++ +++.++++...+++...-
T Consensus 269 DY---v~~i~~Ald~V~-~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~ 344 (560)
T TIGR01839 269 TY---VDALKEAVDAVR-AITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQT 344 (560)
T ss_pred HH---HHHHHHHHHHHH-HhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHH
Confidence 33 334555554432 2235678999999999999986 6777775 799998887755543210
Q ss_pred h---hh-h------------------------------------------------------------------------
Q 025550 176 I---DQ-F------------------------------------------------------------------------ 179 (251)
Q Consensus 176 ~---~~-~------------------------------------------------------------------------ 179 (251)
. +. .
T Consensus 345 ~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~ 424 (560)
T TIGR01839 345 LEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTR 424 (560)
T ss_pred HHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCC
Confidence 0 00 0
Q ss_pred -----------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 180 -----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 180 -----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
...++++|++++.|+.|.++|.+.+..+.+.+. .+++++..++ ||.
T Consensus 425 pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~g---s~~~fvl~~g-GHI 481 (560)
T TIGR01839 425 PDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLG---GKRRFVLSNS-GHI 481 (560)
T ss_pred CCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcC---CCeEEEecCC-Ccc
Confidence 002589999999999999999998877766553 3689998886 883
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-09 Score=78.99 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccC--C-CCCEEEE
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDA--K-KTPILWS 191 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~--~-~~p~l~~ 191 (251)
..+.++.+|++ ++.++.++.+|+|||+||.+++.+...+|+.+...+++||.+-......-...... . ..++.+.
T Consensus 120 L~~~lkP~Ie~--~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~ 197 (264)
T COG2819 120 LTEQLKPFIEA--RYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLY 197 (264)
T ss_pred HHHhhHHHHhc--ccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEE
Confidence 34455555553 46778889999999999999999999999999999999996654433221111110 1 3345555
Q ss_pred ccCC--CC---ccc---chhcccchHHHHh-cCCeeEEEEeCCCCCCCC-HHHHHHHHHHHH
Q 025550 192 HGMA--DR---TVL---FEAGQAGPPFLEQ-AGISCEFKAYPGLGHSIS-NEELRNLESWIK 243 (251)
Q Consensus 192 ~g~~--D~---~~~---~~~~~~~~~~l~~-~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~ 243 (251)
.|.. |. ... .+.+.+..+.+++ .|....+..+++.+|.-. ...+.....|+.
T Consensus 198 iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~~~~~~~~al~~l~ 259 (264)
T COG2819 198 IGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSVIHASLPSALRFLD 259 (264)
T ss_pred ecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccchHHHHHHHHHHhhh
Confidence 4443 33 211 1233444555555 678889999998888643 445566666553
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.6e-10 Score=85.06 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=110.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.|.++++||++++...|......+... .|.++.+|.|+++.+. . . .......+
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-----------~------------~--~~~~~~~~ 75 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-----------P------------A--GYSLSAYA 75 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-----------c------------c--cccHHHHH
Confidence 459999999999888887732222211 1899999999765531 0 0 01111114
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC------------Cc------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP------------FN------------ 172 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~------------~~------------ 172 (251)
..+..+++ ..+. .++.++|||+||.++..++.++|+.+++++.+++... ..
T Consensus 76 ~~~~~~~~---~~~~--~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T COG0596 76 DDLAALLD---ALGL--EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLG 150 (282)
T ss_pred HHHHHHHH---HhCC--CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhc
Confidence 55555555 3333 3499999999999999999999999999998885321 00
Q ss_pred ----------------chhhh-----hhc-------------------------------------ccCCCCCEEEEccC
Q 025550 173 ----------------ASLID-----QFT-------------------------------------SDAKKTPILWSHGM 194 (251)
Q Consensus 173 ----------------~~~~~-----~~~-------------------------------------~~~~~~p~l~~~g~ 194 (251)
..... ... .....+|+++++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 151 LDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGE 230 (282)
T ss_pred cchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecC
Confidence 00000 000 01256999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
.|...+......+.+.+.. ..++.++++.+|....+..+.+.+.+.+
T Consensus 231 ~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAELARRLAAALPN---DARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHHHHHHHHhhCCC---CceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 9965554432222222221 4688999999999987777666666655
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.21 E-value=3e-10 Score=83.50 Aligned_cols=172 Identities=13% Similarity=0.106 Sum_probs=109.3
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
......|+|+|+||+.-....|.++...++++||.+++.++-..- + .....+.++..
T Consensus 41 ~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--------~---------------p~~~~Ei~~aa 97 (307)
T PF07224_consen 41 SEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF--------P---------------PDGQDEIKSAA 97 (307)
T ss_pred CcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc--------C---------------CCchHHHHHHH
Confidence 345689999999999988888888999999999999987753210 0 01123346666
Q ss_pred HHHHHHHHHHHHHHHcC--CCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEeccCCCCcchh---hhh--h--ccc
Q 025550 114 KAVRNVHAMIDKEVAAG--IDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSGWVPFNASL---IDQ--F--TSD 182 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~~~~~~~~~---~~~--~--~~~ 182 (251)
..++|+..-++..+..+ .+..+++++|||.||..|..+|+.+. -.+.++|.+.|.......- ... + ..-
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~SF 177 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYVPQSF 177 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecCCccc
Confidence 77777777776655333 35679999999999999999998774 2378888887755433211 000 1 111
Q ss_pred CCCCCEEEEccCCC----Cccc---chhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 183 AKKTPILWSHGMAD----RTVL---FEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 183 ~~~~p~l~~~g~~D----~~~~---~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
....|++++-..-- ...+ ++. ..-.+.+++...++-..+-.+.||.
T Consensus 178 ~l~iPv~VIGtGLg~~~~~~~~~CaP~g-vnH~eFf~eCk~p~~hfV~~dYGHm 230 (307)
T PF07224_consen 178 DLDIPVLVIGTGLGPKRNPLFPPCAPDG-VNHEEFFNECKPPCAHFVAKDYGHM 230 (307)
T ss_pred ccCCceEEEecCcCccccCCCCCCCCCC-cCHHHHHHhhcccceeeeecccccc
Confidence 35689988654332 1222 111 1223444444446555556667884
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.6e-10 Score=90.71 Aligned_cols=194 Identities=13% Similarity=0.110 Sum_probs=129.2
Q ss_pred CCCccEEEEEecCCCC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..++|.+++.+|+-+- ...|+.-..-|.+.|+.....+.||. |.-+.+|...... ....+...|+.
T Consensus 467 dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG---------Ge~G~~WHk~G~l---akKqN~f~Dfi 534 (712)
T KOG2237|consen 467 DGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG---------GEYGEQWHKDGRL---AKKQNSFDDFI 534 (712)
T ss_pred cCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC---------cccccchhhccch---hhhcccHHHHH
Confidence 4577888877775432 23344433345568887777788765 5556778643321 22333445554
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------------- 178 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------------- 178 (251)
.+++.|.+ +.-..+++.++.|.|.||.++..++.++|+.++++++--|+++.-......
T Consensus 535 a~AeyLve------~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p 608 (712)
T KOG2237|consen 535 ACAEYLVE------NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNP 608 (712)
T ss_pred HHHHHHHH------cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCCh
Confidence 44444433 333467899999999999999999999999999999988866543221100
Q ss_pred -----------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcC-------CeeEEEEeCCCCCCCC---
Q 025550 179 -----------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG-------ISCEFKAYPGLGHSIS--- 231 (251)
Q Consensus 179 -----------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~g~~H~~~--- 231 (251)
......-.-+++..+++|..|.+..+.++.++|+..- .++-+.+..++||..-
T Consensus 609 ~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~ 688 (712)
T KOG2237|consen 609 EDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPR 688 (712)
T ss_pred hhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCch
Confidence 0011134678899999999999988888888888751 3466788899999763
Q ss_pred ---HHHHHHHHHHHHHhhc
Q 025550 232 ---NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 ---~~~~~~~~~~l~~~l~ 247 (251)
.++.....+||.+.+.
T Consensus 689 ~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 689 FKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3445667778877664
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.7e-09 Score=78.76 Aligned_cols=185 Identities=12% Similarity=0.093 Sum_probs=101.2
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
.++..+..|-..|... ...+++.||+..|++..-.+|..++.+++.+||+++++|--.+- |.+.
T Consensus 10 ~~~~~I~vwet~P~~~----~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~Hv--------GlSs---- 73 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNN----EPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHV--------GLSS---- 73 (294)
T ss_dssp TTTEEEEEEEE---TT----S---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B------------------
T ss_pred CCCCEEEEeccCCCCC----CcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccc--------cCCC----
Confidence 4556766665553322 23456899999999999999999999999999999999965331 2111
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~ 174 (251)
+.-++-.+....+.+..+++.+.+.+ ..+++|+.-|.-|.+|+..+.+- .+.-+|..-|.......
T Consensus 74 ----------G~I~eftms~g~~sL~~V~dwl~~~g--~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~T 139 (294)
T PF02273_consen 74 ----------GDINEFTMSIGKASLLTVIDWLATRG--IRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRDT 139 (294)
T ss_dssp -----------------HHHHHHHHHHHHHHHHHTT-----EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHHH
T ss_pred ----------CChhhcchHHhHHHHHHHHHHHHhcC--CCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHHH
Confidence 12234445555566666666554555 45799999999999999988743 35555655564443222
Q ss_pred hhhhh---------------------------------------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 175 LIDQF---------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 175 ~~~~~---------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
+...+ ..+...+|++.+++++|..|......++.+
T Consensus 140 Le~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~ 219 (294)
T PF02273_consen 140 LEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLD 219 (294)
T ss_dssp HHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHT
T ss_pred HHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHH
Confidence 11110 013478999999999999998876555554
Q ss_pred HHHhcCCeeEEEEeCCCCCCCC
Q 025550 210 FLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.+.. ..+++..++|..|.+.
T Consensus 220 ~~~s--~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 220 NINS--NKCKLYSLPGSSHDLG 239 (294)
T ss_dssp T-TT----EEEEEETT-SS-TT
T ss_pred hcCC--CceeEEEecCccchhh
Confidence 4443 3588999999999875
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4e-09 Score=81.78 Aligned_cols=116 Identities=22% Similarity=0.261 Sum_probs=72.9
Q ss_pred CCCCccEEEEEecCCCCCCCc-----------hhhhh---hhcCCCcceEEEEccCCCCC---CcccCCCCcCCcccccc
Q 025550 35 NPMARNFILWLHGLGDSGPAN-----------EPIKT---LFTSPEFKLTKWSFPSAPNN---PVTCNYGAVMPSWFDIH 97 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~-----------~~~~~---~~~~~g~~~~~~~~~~~~~~---~~~~~~g~~~~~w~~~~ 97 (251)
...+.++|+++|+.+++.... ..+.. .+.-..|-++..+..|++.. |.+...+ +..|
T Consensus 47 n~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~--g~~y---- 120 (368)
T COG2021 47 NAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPG--GKPY---- 120 (368)
T ss_pred cccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCC--CCcc----
Confidence 335678999999999854332 22222 35556677888888776531 1111111 1111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNV-FVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
...-...++.+.+..-+.+++ ..++. ++ +++|-||||+.++.++..+|+++..++.+++
T Consensus 121 ------g~~FP~~ti~D~V~aq~~ll~---~LGI~--~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 121 ------GSDFPVITIRDMVRAQRLLLD---ALGIK--KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred ------ccCCCcccHHHHHHHHHHHHH---hcCcc--eEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 111123445555555555555 45553 55 4999999999999999999999998888876
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.9e-09 Score=83.43 Aligned_cols=170 Identities=18% Similarity=0.145 Sum_probs=105.5
Q ss_pred CCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH--
Q 025550 37 MARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL-- 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~-- 112 (251)
+.+|+.|.+.|.|.+....+. ++..|.+.|+..+.+..|-.+.+. +..-.. ..-....|+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~Rk---------P~~Q~~-------s~l~~VsDl~~ 153 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRK---------PKDQRR-------SSLRNVSDLFV 153 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccC---------hhHhhc-------ccccchhHHHH
Confidence 468999999998887665555 477777789999999988554321 111000 001122222
Q ss_pred --HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC-------------cchhhh
Q 025550 113 --LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF-------------NASLID 177 (251)
Q Consensus 113 --~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~-------------~~~~~~ 177 (251)
...+.+.+.+++.+.+. ...+++|.|.||||.+|..++...|..+..+-.+++.... ...+..
T Consensus 154 ~g~~~i~E~~~Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~ 231 (348)
T PF09752_consen 154 MGRATILESRALLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEK 231 (348)
T ss_pred HHhHHHHHHHHHHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHH
Confidence 23344444444444334 4559999999999999999999999876655555442210 000000
Q ss_pred h--------------------------------------------------hcccCCCCCEEEEccCCCCcccchhcccc
Q 025550 178 Q--------------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 178 ~--------------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
. +........+.++.+++|..||......+
T Consensus 232 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~L 311 (348)
T PF09752_consen 232 QFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSL 311 (348)
T ss_pred HhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchH
Confidence 0 00112344678899999999998877666
Q ss_pred hHHHHhcCCeeEEEEeCCCCCC
Q 025550 208 PPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.+.+.. .++..++| ||.
T Consensus 312 q~~WPG----sEvR~l~g-GHV 328 (348)
T PF09752_consen 312 QEIWPG----SEVRYLPG-GHV 328 (348)
T ss_pred HHhCCC----CeEEEecC-CcE
Confidence 555544 57777887 995
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.4e-09 Score=85.55 Aligned_cols=194 Identities=15% Similarity=0.179 Sum_probs=129.1
Q ss_pred CCCCccEEEEEecCCCCC--CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLGDSG--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
...+.|++++.-|.-+.. .+|....-.|.++|+...+.-.||. |+-++.|+..... ........|+
T Consensus 444 ~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG---------gelG~~WYe~GK~---l~K~NTf~DF 511 (682)
T COG1770 444 LDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG---------GELGRAWYEDGKL---LNKKNTFTDF 511 (682)
T ss_pred CCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc---------cccChHHHHhhhh---hhccccHHHH
Confidence 456778888877754432 3344333367789997766666644 5667889875442 3334455555
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh--------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ-------------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~-------------- 178 (251)
.++++.|.+ +.-.+.++++++|-|.||++...++...|+.++++|+..|+.+......+.
T Consensus 512 Ia~a~~Lv~------~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGN 585 (682)
T COG1770 512 IAAARHLVK------EGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGN 585 (682)
T ss_pred HHHHHHHHH------cCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCC
Confidence 555555443 333467899999999999999999999999999999999977643322111
Q ss_pred ------------hc-----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe---eEEEEeCCCCCCCC------H
Q 025550 179 ------------FT-----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS---CEFKAYPGLGHSIS------N 232 (251)
Q Consensus 179 ------------~~-----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~~~~g~~H~~~------~ 232 (251)
++ ..+.-+++|+..|.+|+.|.+-...++..+|++.+.+ +=+..--.+||.-. .
T Consensus 586 P~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~l 665 (682)
T COG1770 586 PLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRL 665 (682)
T ss_pred cCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHH
Confidence 00 1246689999999999999998888899999987554 33444345799532 2
Q ss_pred HHHHHHHHHHHHhh
Q 025550 233 EELRNLESWIKTRM 246 (251)
Q Consensus 233 ~~~~~~~~~l~~~l 246 (251)
++...-..|+...+
T Consensus 666 ee~A~eYaF~l~~~ 679 (682)
T COG1770 666 EEIAFEYAFLLKLA 679 (682)
T ss_pred HHHHHHHHHHhhhc
Confidence 23333445555544
|
|
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-09 Score=76.15 Aligned_cols=167 Identities=16% Similarity=0.222 Sum_probs=103.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
-.+||+-|-|+-...-..+++.|+++|+.++.+|.+. +-| ...+.++...++
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~--------------Yfw--------------~~rtP~~~a~Dl 54 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLR--------------YFW--------------SERTPEQTAADL 54 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHH--------------HHh--------------hhCCHHHHHHHH
Confidence 3678888877766555568899999999999999641 111 123334445555
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCC------------Ccchh-----hhh
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVP------------FNASL-----IDQ 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~------------~~~~~-----~~~ 178 (251)
..+++... .....++++|+|+|+|+-+...+..+.|. +++.++++++... ....- ...
T Consensus 55 ~~~i~~y~-~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pe 133 (192)
T PF06057_consen 55 ARIIRHYR-ARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPE 133 (192)
T ss_pred HHHHHHHH-HHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHH
Confidence 55555543 12246799999999999888888877764 4778887776322 11111 111
Q ss_pred hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 179 ~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+ .+....|++-++|++|.-.... .++.. .++.+..|| ||.|..+ .+.+.+.|.+.++
T Consensus 134 i-~~l~~~~v~CiyG~~E~d~~cp-------~l~~~--~~~~i~lpG-gHHfd~d-y~~La~~Il~~l~ 190 (192)
T PF06057_consen 134 I-AKLPPAPVQCIYGEDEDDSLCP-------SLRQP--GVEVIALPG-GHHFDGD-YDALAKRILDALK 190 (192)
T ss_pred H-HhCCCCeEEEEEcCCCCCCcCc-------cccCC--CcEEEEcCC-CcCCCCC-HHHHHHHHHHHHh
Confidence 1 1124468999999888653222 12222 468889998 8877644 4444444444443
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.2e-10 Score=95.47 Aligned_cols=111 Identities=13% Similarity=0.194 Sum_probs=74.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccC-CC----Cc-CCccccccCCCCCCCCCCChhH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN-YG----AV-MPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~g----~~-~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..|+||++||++++...|..+++.|.+.||.++.+|+|+++.+..... .+ .. ...+++.... ......
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l------~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASL------LVARDN 521 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccc------cccccC
Confidence 457999999999999999999999998999999999999987632200 00 00 0001111100 111235
Q ss_pred HHHHHHHHHHHHHHHHH-----c------CCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 112 LLKAVRNVHAMIDKEVA-----A------GIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~-----~------~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.+.+.++..+...+.. . ..+..++.++||||||.++..++..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 56666666666554420 1 1456799999999999999988875
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.6e-09 Score=79.31 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=80.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhc---CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFT---SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+.++++++|-.+--..|..+.+.+. ...+.++.+...|+...+...... ......++.+.
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~-----------------~~~~~~sL~~Q 64 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFS-----------------PNGRLFSLQDQ 64 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccccc-----------------CCCCccCHHHH
Confidence 5789999999998888888777555 357888888777664432110000 12344566666
Q ss_pred HHHHHHHHHHHHH-cCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCC
Q 025550 116 VRNVHAMIDKEVA-AGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWV 169 (251)
Q Consensus 116 ~~~l~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~ 169 (251)
++.-.+.+++... ......+++++|||.|+++++.++.+.+ ..+.+++++.|.+
T Consensus 65 I~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 65 IEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 7777777776552 2224578999999999999999999998 6688888887743
|
|
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.4e-08 Score=80.03 Aligned_cols=175 Identities=15% Similarity=0.161 Sum_probs=113.6
Q ss_pred cEEEEEecCCCCCCCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
|.|+++.-..+..... +.+++.|.+ |+.++..|.......+. ....-++.+.++.
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~-----------------------~~~~f~ldDYi~~ 158 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL-----------------------SAGKFDLEDYIDY 158 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch-----------------------hcCCCCHHHHHHH
Confidence 5677777666433322 337778887 99999999865432110 0122334455667
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcch---------------hhh-
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNAS---------------LID- 177 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~---------------~~~- 177 (251)
+.+.++.+ ..+ +.++|+|+||..++.+++.. |..++.++++.+.+++... +.+
T Consensus 159 l~~~i~~~-----G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~ 232 (406)
T TIGR01849 159 LIEFIRFL-----GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHN 232 (406)
T ss_pred HHHHHHHh-----CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHH
Confidence 77777632 334 89999999999977665553 5568999988886654321 000
Q ss_pred ---------------hhc--------------------------------------------------------------
Q 025550 178 ---------------QFT-------------------------------------------------------------- 180 (251)
Q Consensus 178 ---------------~~~-------------------------------------------------------------- 180 (251)
.+.
T Consensus 233 ~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~ 312 (406)
T TIGR01849 233 VIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDV 312 (406)
T ss_pred hhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHH
Confidence 000
Q ss_pred --------------------ccCCC-CCEEEEccCCCCcccchhcccchHHHHhcCC-eeEEEEeCCCCCC--C-----C
Q 025550 181 --------------------SDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHS--I-----S 231 (251)
Q Consensus 181 --------------------~~~~~-~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~--~-----~ 231 (251)
..+++ +|++.+.|++|.++++.++..+.+.+...+. +++.++.+++||. + .
T Consensus 313 vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~ 392 (406)
T TIGR01849 313 VFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFR 392 (406)
T ss_pred HHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhh
Confidence 01366 9999999999999999999888887644332 3567777778994 2 2
Q ss_pred HHHHHHHHHHHHH
Q 025550 232 NEELRNLESWIKT 244 (251)
Q Consensus 232 ~~~~~~~~~~l~~ 244 (251)
.+....+.+||.+
T Consensus 393 ~~i~P~i~~wl~~ 405 (406)
T TIGR01849 393 EEIYPLVREFIRR 405 (406)
T ss_pred hhhchHHHHHHHh
Confidence 3446778888865
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.3e-09 Score=77.31 Aligned_cols=110 Identities=15% Similarity=0.201 Sum_probs=63.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhc--------CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFT--------SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
....|||+||.+++...++.++..+. ...+..+.+||...... ..|. .-....
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~----~~g~---------------~l~~q~ 63 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSA----FHGR---------------TLQRQA 63 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccc----cccc---------------cHHHHH
Confidence 34679999998888777777665441 22456677777532110 0000 001112
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~ 169 (251)
+.+.+.++.+.+... ....+.++|+|+||||||.++-.++...+ +.++.++.++...
T Consensus 64 ~~~~~~i~~i~~~~~---~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 64 EFLAEAIKYILELYK---SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHHhhh---hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 223333333333221 22346789999999999998887765543 4588888887643
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-08 Score=80.23 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=76.4
Q ss_pred CCccEEEEEecCCCCCCCchh------hhhhhcCCCcceEEEEccCCCCCCcccCCCCc-CCccccccCCCCCCCCCCCh
Q 025550 37 MARNFILWLHGLGDSGPANEP------IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV-MPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~-~~~w~~~~~~~~~~~~~~~~ 109 (251)
.++|+|++.||.-.++..|.. ++=.|+++||.|-.-..||..-++.-...... ....++..-. +...
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~------Em~~ 144 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWH------EMGT 144 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchh------hhhh
Confidence 889999999999888877765 33378899999998888764322211112211 1111111100 2233
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~ 169 (251)
.|+.++++.+.+. . ..+++..+|||+|+.....++...|+ +++..++++|..
T Consensus 145 yDLPA~IdyIL~~------T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 145 YDLPAMIDYILEK------T--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred cCHHHHHHHHHHh------c--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 4555555555432 1 45799999999999999988887765 577888888744
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.5e-09 Score=88.87 Aligned_cols=116 Identities=22% Similarity=0.194 Sum_probs=76.0
Q ss_pred CCCccEEEEEecCCC---CCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLGD---SGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.++.|+||++||++. +...+ ......... ++.++.++||..+.. + ...... ...+.....|
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g-------~-----~~~~~~--~~~~n~g~~D 156 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLG-------F-----LSTGDI--ELPGNYGLKD 156 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccc-------c-----ccCCCC--CCCcchhHHH
Confidence 467899999999763 22222 112222223 388999999854431 1 000000 0112334577
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
...+++++++.+. ..+.|+++|.|+|+|.||.++..++... +..++++|+.||..
T Consensus 157 ~~~al~wv~~~i~---~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 157 QRLALKWVQDNIA---AFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHH---HhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 8888888888877 6788999999999999999998877662 34588888888744
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=4e-08 Score=67.42 Aligned_cols=155 Identities=15% Similarity=0.201 Sum_probs=92.8
Q ss_pred EEEEecCCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
||++||+.++..+.+.... .+.+.....+.+..|.- ..+...+++.+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l-------------------------------~h~p~~a~~ele 50 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHL-------------------------------PHDPQQALKELE 50 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCC-------------------------------CCCHHHHHHHHH
Confidence 8999999998877766222 23334444444444322 234455677777
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhh---------------------
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF--------------------- 179 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~--------------------- 179 (251)
+++.. .+ .+..+|+|-|+||+.+.+++.+.. +++++ +.|.+.+.+.+...+
T Consensus 51 ~~i~~---~~--~~~p~ivGssLGGY~At~l~~~~G--irav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~ 122 (191)
T COG3150 51 KAVQE---LG--DESPLIVGSSLGGYYATWLGFLCG--IRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHIAT 122 (191)
T ss_pred HHHHH---cC--CCCceEEeecchHHHHHHHHHHhC--Chhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHH
Confidence 76663 22 234899999999999999998864 56665 555443322221111
Q ss_pred ------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 180 ------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 180 ------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
...+...-.+++.-+.|.+.+...+.+.+... ..++..|.+|.|. ...++.|..|.
T Consensus 123 l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~-------~~~V~dgg~H~F~~f~~~l~~i~aF~ 186 (191)
T COG3150 123 LCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPC-------YEIVWDGGDHKFKGFSRHLQRIKAFK 186 (191)
T ss_pred HHHhhccccCCCcEEEeecccccHHHHHHHHHHHhhhh-------hheeecCCCccccchHHhHHHHHHHh
Confidence 11112222445555669988877544444333 4567788899986 45577777775
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-08 Score=82.14 Aligned_cols=120 Identities=20% Similarity=0.230 Sum_probs=78.9
Q ss_pred CCCCccEEEEEecCC---CCCCCchhhhhhhcCCC-cceEEEEccCCCCCCcccCCCCcCCccccccCCC--CCCCCCCC
Q 025550 35 NPMARNFILWLHGLG---DSGPANEPIKTLFTSPE-FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP--VTASSPKD 108 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~--~~~~~~~~ 108 (251)
...+.|++|++||++ +++.....--..|+++| +.++.++||.... .|++....+ ........
T Consensus 90 ~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~l------------GfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 90 PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGAL------------GFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred CCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccc------------eeeehhhcccccccccccc
Confidence 445679999999977 33333212223566666 8999999985432 223333322 11112345
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCC
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVP 170 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~ 170 (251)
..|...+++|+++.|. ..+-|+++|.|+|.|.||+.++.++. .|. .+..+|+.||...
T Consensus 158 l~DqilALkWV~~NIe---~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIE---AFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHH---HhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 6777788888888888 78889999999999999988876544 343 3666677777554
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-07 Score=74.44 Aligned_cols=174 Identities=18% Similarity=0.198 Sum_probs=103.1
Q ss_pred CccEEEEEecCCCCCCCchh-------hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 38 ARNFILWLHGLGDSGPANEP-------IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..|+||++||+|-.-..... +...+. ....+.+||..++.. ..| ..-..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~----~~~------------------~~yPt 176 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD----EHG------------------HKYPT 176 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc----cCC------------------CcCch
Confidence 45999999998843333222 222343 458888998765411 011 11234
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC-----CCcceEEEeccCCCCcchhhh--------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP-----RKLGGGAIFSGWVPFNASLID-------- 177 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~~~~~~i~~~~~~~~~~~~~~-------- 177 (251)
++.+.++....+++ .. +.++|.|+|-|.||.+++.+..... ...+++|++|||.........
T Consensus 177 QL~qlv~~Y~~Lv~---~~--G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n 251 (374)
T PF10340_consen 177 QLRQLVATYDYLVE---SE--GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDN 251 (374)
T ss_pred HHHHHHHHHHHHHh---cc--CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccc
Confidence 44555555555443 23 3579999999999999987765421 236889999999875410000
Q ss_pred ----------------h---------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 178 ----------------Q---------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 178 ----------------~---------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
. +.....+..++++.|+++-+ .++.+++.+.+.+.
T Consensus 252 ~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~~~ 329 (374)
T PF10340_consen 252 EKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLNDV 329 (374)
T ss_pred ccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHhhc
Confidence 0 00001446788889888865 45677788888755
Q ss_pred CC-----eeEEEEeCCCCCCCC-HHHHHHHHHHH
Q 025550 215 GI-----SCEFKAYPGLGHSIS-NEELRNLESWI 242 (251)
Q Consensus 215 ~~-----~~~~~~~~g~~H~~~-~~~~~~~~~~l 242 (251)
+. ..+..+-+++.|--. .....++-.|.
T Consensus 330 ~~~~~~~~~nv~~~~~G~Hi~P~~~~~~~~~~W~ 363 (374)
T PF10340_consen 330 KPNKFSNSNNVYIDEGGIHIGPILNYSRDLDKWS 363 (374)
T ss_pred CccccCCcceEEEecCCccccchhhhhcCHHHHh
Confidence 42 356666777788543 22233444443
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.1e-07 Score=73.62 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
+.+.......++++....+-+..+..|+|-|+||+.++++|+..|+.+.-+++-+.
T Consensus 118 l~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGa 173 (581)
T PF11339_consen 118 LEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGA 173 (581)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCC
Confidence 34444444444444444555555899999999999999999999998777775544
|
Their function is unknown. |
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-08 Score=80.50 Aligned_cols=138 Identities=13% Similarity=0.173 Sum_probs=78.0
Q ss_pred CCCccEEEEEecCCCCC--CCchh-hhh-hhcC--CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSG--PANEP-IKT-LFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~~~-~~~-~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+..+|++|++||+.++. ..|.. +.+ ++.. .++.++.+|+...-. ..+ ....
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~-----------~~Y------------~~a~ 124 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS-----------NNY------------PQAV 124 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS-----------S-H------------HHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc-----------ccc------------cchh
Confidence 56789999999999877 33444 444 5565 689999999752110 000 1112
Q ss_pred hHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEeccCCCCcchhhh--hhcccCC
Q 025550 110 SSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSGWVPFNASLID--QFTSDAK 184 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~~~~~~~~~~~--~~~~~~~ 184 (251)
.........+..++..+. ..+++.+++.|+|||+||++|..++..... ++..|..+.|..+....... ++... -
T Consensus 125 ~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~-D 203 (331)
T PF00151_consen 125 ANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKS-D 203 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GG-G
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhcc-C
Confidence 333344455555566555 678899999999999999999998888776 79999999987775543221 11111 1
Q ss_pred CCCEEEEccCCCC
Q 025550 185 KTPILWSHGMADR 197 (251)
Q Consensus 185 ~~p~l~~~g~~D~ 197 (251)
..=|-++|...+.
T Consensus 204 A~fVdvIHT~~~~ 216 (331)
T PF00151_consen 204 AKFVDVIHTNAGT 216 (331)
T ss_dssp SSEEEEE-SSES-
T ss_pred CceEEEEEcCCcc
Confidence 2335567766643
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=2e-08 Score=72.64 Aligned_cols=178 Identities=19% Similarity=0.285 Sum_probs=106.4
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
.++.-.+.|.-...|+.++...+..||.++.+||++.+.+.-....+ .+| .. .+....|+..+++.+.
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~---~~~-~~--------~DwA~~D~~aal~~~~ 99 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSG---SQW-RY--------LDWARLDFPAALAALK 99 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCcccccc---Ccc-ch--------hhhhhcchHHHHHHHH
Confidence 45555556666677888999999999999999999887654332221 112 00 0113345555555554
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe------ccCCCCcchh-------------------
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF------SGWVPFNASL------------------- 175 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~------~~~~~~~~~~------------------- 175 (251)
+.. +.-+...+|||+||.+...+. +++ +..+...+ +++......+
T Consensus 100 ~~~--------~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~ 169 (281)
T COG4757 100 KAL--------PGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGY 169 (281)
T ss_pred hhC--------CCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhcccc
Confidence 322 456789999999998876543 444 23332222 2222110000
Q ss_pred ----------------hhhh---------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 176 ----------------IDQF---------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 176 ----------------~~~~---------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
.+.. .-....+|+..+...+|+-.|+...+.+.+....+ +.
T Consensus 170 ~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA--pl 247 (281)
T COG4757 170 MPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNA--PL 247 (281)
T ss_pred CcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC--cc
Confidence 0000 00247899999999999999999888888877765 55
Q ss_pred EEEEeCC----CCCC-CCHH----HHHHHHHHH
Q 025550 219 EFKAYPG----LGHS-ISNE----ELRNLESWI 242 (251)
Q Consensus 219 ~~~~~~g----~~H~-~~~~----~~~~~~~~l 242 (251)
+.+.++- .||. ++.+ ..+++.+|+
T Consensus 248 ~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 248 EMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 5555543 4785 2222 246666664
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.9e-06 Score=67.59 Aligned_cols=206 Identities=13% Similarity=0.155 Sum_probs=113.1
Q ss_pred CCCCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCCC--CcccCCCCcCCccccccCCCCCCCC----
Q 025550 35 NPMARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPNN--PVTCNYGAVMPSWFDIHEIPVTASS---- 105 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~g~~~~~w~~~~~~~~~~~~---- 105 (251)
..+..-+||++||.|.+... ...+.+.|.+.||+++.+-.|.-... +.....-.....- ...........
T Consensus 83 ~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a-~~~~~~~~~~~~~~~ 161 (310)
T PF12048_consen 83 SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSA-GDQQLSQPSDEPSPA 161 (310)
T ss_pred CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCC-CCCCcCCCCCCCccc
Confidence 45667899999999987643 23366689999999999999872211 1100000000000 00000000000
Q ss_pred -----CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEeccCCCCcchhhhh-
Q 025550 106 -----PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSGWVPFNASLIDQ- 178 (251)
Q Consensus 106 -----~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~~~~~~~~~~~~- 178 (251)
.............+.+.+....+. ...+++|+||+.|+..+..+....+. .+.++|+++++.+........
T Consensus 162 ~~~~~~~~~~~~~~~~ari~Aa~~~~~~~--~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~ 239 (310)
T PF12048_consen 162 SAQEAEAREAYEERLFARIEAAIAFAQQQ--GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALA 239 (310)
T ss_pred cccHhHHhHHHHHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHH
Confidence 000112223333444444433222 34569999999999999999988774 488999999988766541111
Q ss_pred hcccCCCCCEEEEccCCCCcccchhcccchHHHHhc-CCeeEEEEeCCCCCCCCH--H-HHHHHHHHHHH
Q 025550 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA-GISCEFKAYPGLGHSISN--E-ELRNLESWIKT 244 (251)
Q Consensus 179 ~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-~~~~~~~~~~g~~H~~~~--~-~~~~~~~~l~~ 244 (251)
-.....+.|||=++..+ .......+..-....++. ...++-..+.+..|.... + ....|..|+.+
T Consensus 240 ~~la~l~iPvLDi~~~~-~~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~ 308 (310)
T PF12048_consen 240 EQLAQLKIPVLDIYSAD-NPASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKR 308 (310)
T ss_pred HHhhccCCCEEEEecCC-ChHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHh
Confidence 11234789999888777 332223222222223332 234666777776665542 2 34566666654
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=98.83 E-value=8.7e-09 Score=63.35 Aligned_cols=45 Identities=7% Similarity=0.276 Sum_probs=41.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCC
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
+.+.+|+++||.+.+...|..+++.|+++||.++.+|.++++.+.
T Consensus 14 ~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 14 PPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 378999999999999999999999999999999999999997753
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=71.42 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=91.2
Q ss_pred CCCccEEEEEecCCCCCCCch-hhhhhhcCCCc--ceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPANE-PIKTLFTSPEF--KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~-~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.+.++||+||+..+...-. ..++.....++ .++.+..|..+.. .. ...+....
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~----------~~------------Y~~d~~~a 72 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL----------LG------------YFYDRESA 72 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh----------hh------------hhhhhhhH
Confidence 356789999999998754422 23333333333 5667777744320 11 13344566
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cC-----CCcceEEEeccCCCCcchhhhhhcccC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YP-----RKLGGGAIFSGWVPFNASLIDQFTSDA 183 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p-----~~~~~~i~~~~~~~~~~~~~~~~~~~~ 183 (251)
..+...+.+++..+.+. ...++|.|++||||+.+.+.+... .+ ..+..+++.+|..+...-.........
T Consensus 73 ~~s~~~l~~~L~~L~~~-~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~ 151 (233)
T PF05990_consen 73 RFSGPALARFLRDLARA-PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGS 151 (233)
T ss_pred HHHHHHHHHHHHHHHhc-cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhh
Confidence 66777777777766432 346799999999999999877644 11 257889999987776332211112233
Q ss_pred CCCCEEEEccCCCCcccch
Q 025550 184 KKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~ 202 (251)
...++.+.+..+|......
T Consensus 152 ~~~~itvy~s~~D~AL~~S 170 (233)
T PF05990_consen 152 SARRITVYYSRNDRALKAS 170 (233)
T ss_pred cCCCEEEEEcCCchHHHHH
Confidence 5589999999999875543
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.9e-07 Score=68.55 Aligned_cols=193 Identities=14% Similarity=0.112 Sum_probs=111.7
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCc-----ceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEF-----KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..||+||++++......+++.+...+- -++.++--+. ....+-.+...-++.... ..........+.
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgs----lk~tGk~~Kd~~nP~I~~----gfe~n~~s~~~~ 118 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGS----LKVTGKISKDAKNPIIEF----GFEDNTASGLDQ 118 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCc----EEEeeeecccCCCCeEEE----EEecCcCchhhH
Confidence 468999999999999888887765541 1222232221 111111111111111110 012233344445
Q ss_pred HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCC-----cchhh----hh--
Q 025550 116 VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPF-----NASLI----DQ-- 178 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~-----~~~~~----~~-- 178 (251)
..++..++..+. ++++ .++-++||||||....+++..+.. .+...|++++.+.. ..... ..
T Consensus 119 s~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~ 196 (288)
T COG4814 119 SKWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPG 196 (288)
T ss_pred HHHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCcc
Confidence 777777777775 5554 589999999999999988887532 47888888886651 11110 00
Q ss_pred -------------hcccCCCCCEEEEccCCC------CcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCC---HHH
Q 025550 179 -------------FTSDAKKTPILWSHGMAD------RTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSIS---NEE 234 (251)
Q Consensus 179 -------------~~~~~~~~p~l~~~g~~D------~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~---~~~ 234 (251)
......+..++++.|+-| ..||...+...+..+...+..+.-.+++| +.|.-. ...
T Consensus 197 ~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v 276 (288)
T COG4814 197 LIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTV 276 (288)
T ss_pred ccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhH
Confidence 001125678999999874 56777777777777777665555555665 467543 223
Q ss_pred HHHHHHHHH
Q 025550 235 LRNLESWIK 243 (251)
Q Consensus 235 ~~~~~~~l~ 243 (251)
...+..||-
T Consensus 277 ~~yv~~FLw 285 (288)
T COG4814 277 AKYVKNFLW 285 (288)
T ss_pred HHHHHHHhh
Confidence 455666654
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.5e-08 Score=78.20 Aligned_cols=117 Identities=12% Similarity=0.077 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHH---HcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEeccCCCCcchhhhhhcc---cC
Q 025550 111 SLLKAVRNVHAMIDKEV---AAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSGWVPFNASLIDQFTS---DA 183 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~~~~~~~~~~~~~~~---~~ 183 (251)
.+....+.+..+..... ........|+|+|+|||+.++++....+.+. +.++|.++=.+...+. .+.+.+ -.
T Consensus 224 nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg-prgirDE~Lld 302 (784)
T KOG3253|consen 224 NIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG-PRGIRDEALLD 302 (784)
T ss_pred chHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc-ccCCcchhhHh
Confidence 34444444444443221 3445678999999999988888877665433 6777766543322111 011111 13
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.+.|+|++.|.+|...+.+..+++.+++++ ..+++++.+++|.+.
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsma 347 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMA 347 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCcccc
Confidence 789999999999999999988888888877 678999999999873
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.7e-07 Score=86.28 Aligned_cols=174 Identities=11% Similarity=0.109 Sum_probs=112.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.++++||.+++...|..+++.+. .++.++.++.|+.... .....++.+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~-------------------------~~~~~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGP-------------------------MQTATSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCC-------------------------CCCCCCHHHHHHH
Confidence 3679999999999999999998885 5689999998865321 1122455556666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh---cCCCcceEEEeccCCCCc------------chhh-------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL---YPRKLGGGAIFSGWVPFN------------ASLI------- 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~p~~~~~~i~~~~~~~~~------------~~~~------- 176 (251)
+.+.+... . ...++.++|||+||.++..+|.+ .++.+..++++.++.... ....
T Consensus 1122 ~~~~i~~~---~-~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1197 (1296)
T PRK10252 1122 HLATLLEQ---Q-PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDRER 1197 (1296)
T ss_pred HHHHHHhh---C-CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhH
Confidence 66655532 1 23589999999999999999886 466788887776533211 0000
Q ss_pred --------------------hh----------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 177 --------------------DQ----------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 177 --------------------~~----------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
.. ........|+.++.++.|..........+.+.. ..++.+.++|
T Consensus 1198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~----~~~~~~~v~g- 1272 (1296)
T PRK10252 1198 EAFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI----AELDVYRQDC- 1272 (1296)
T ss_pred HHHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc----CCCEEEECCC-
Confidence 00 001235688999999888655544433343332 2456677775
Q ss_pred CCCCC--HHHHHHHHHHHHHhhc
Q 025550 227 GHSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 227 ~H~~~--~~~~~~~~~~l~~~l~ 247 (251)
+|... .+....+.++|.+.+.
T Consensus 1273 ~H~~~~~~~~~~~~~~~l~~~l~ 1295 (1296)
T PRK10252 1273 AHVDIISPEAFEKIGPILRATLN 1295 (1296)
T ss_pred CHHHHCCcHHHHHHHHHHHHHhc
Confidence 89754 4456777888777653
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.5e-06 Score=65.95 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=106.6
Q ss_pred CCccEEEEEecCCCCCCC-chhhhh----hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGDSGPA-NEPIKT----LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.++|++|=+|..|-+... |..+.. ....+.+.++.+|.||....-.+... .....+
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-------------------~y~yPs 81 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-------------------GYQYPS 81 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T-------------------T-----
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc-------------------cccccC
Confidence 368999999999976544 555322 12236899999999977542111111 112345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------ 173 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------ 173 (251)
+++..+.+..+++ ..++ +.++-+|--.|+.+-..+|..+|+++.|+|++++......
T Consensus 82 md~LAe~l~~Vl~---~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 82 MDQLAEMLPEVLD---HFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp HHHHHCTHHHHHH---HHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------C
T ss_pred HHHHHHHHHHHHH---hCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccc
Confidence 5556666666666 3444 5799999999999999999999999999999987332110
Q ss_pred -----------------------hhhhh--------h--------------------cccCCCCCEEEEccCCCCcccch
Q 025550 174 -----------------------SLIDQ--------F--------------------TSDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 174 -----------------------~~~~~--------~--------------------~~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
+..+. . ......+|+|++.|+.-+.. +
T Consensus 157 mt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~ 234 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--D 234 (283)
T ss_dssp TTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--H
T ss_pred cccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--h
Confidence 00000 0 01236799999999988763 4
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+..+..+|.. .+.++..++++|=....+.+.++.+-|+=+++
T Consensus 235 ~vv~~ns~Ldp--~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 235 DVVEMNSKLDP--TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHHS-C--CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred hHHHHHhhcCc--ccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 55566666644 35899999998877777777776665555543
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.6e-08 Score=83.66 Aligned_cols=115 Identities=21% Similarity=0.222 Sum_probs=71.4
Q ss_pred CccEEEEEecCCCC---CC-CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGDS---GP-ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.|++|++||++.. +. ....-...+...++.++.+.||...- +|+........ .+.....|..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~------------Gfl~~~~~~~~-~gN~Gl~Dq~ 190 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAF------------GFLSLGDLDAP-SGNYGLLDQR 190 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHH------------HH-BSSSTTSH-BSTHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccc------------ccccccccccC-chhhhhhhhH
Confidence 68999999997732 21 12223345667899999999984321 11111111000 1233456777
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGW 168 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~ 168 (251)
.+++|+++.|. ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||.
T Consensus 191 ~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 191 LALKWVQDNIA---AFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred HHHHHHHhhhh---hcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 77888888777 7888999999999999999988776652 2469999999983
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.9e-07 Score=71.03 Aligned_cols=106 Identities=10% Similarity=0.182 Sum_probs=62.6
Q ss_pred CccEEEEEecCCCCC-----CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 38 ARNFILWLHGLGDSG-----PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
-.+.++++|-+-... ..-+.++..+.++|..++.++..+-.. +.. ....++.
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~---------~~~--------------~~~~edY 162 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDA---------SLA--------------AKNLEDY 162 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchH---------hhh--------------hccHHHH
Confidence 344566667644221 112337788999999999988763211 111 1122222
Q ss_pred H-HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEeccCCC
Q 025550 113 L-KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSGWVP 170 (251)
Q Consensus 113 ~-~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~~~~ 170 (251)
. ..+....+.+.+ .. ..++|-++|+|.||.++..+++.++.+ ++.+..+....+
T Consensus 163 i~e~l~~aid~v~~--it--g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 163 ILEGLSEAIDTVKD--IT--GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHHHHHHHHH--Hh--CccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 2 222222222222 11 346899999999999999888888876 888877765443
|
|
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.2e-06 Score=62.12 Aligned_cols=183 Identities=11% Similarity=0.082 Sum_probs=103.9
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCC---cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPE---FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+++.++++.|-.+....|..+++.+...- +.+..+-.-++-.-|.+.....+ ....+.-+
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s--------------~~~~eifs 90 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHS--------------HTNEEIFS 90 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccc--------------cccccccc
Confidence 34678999999999999888888888554322 33444444433332211111110 11222333
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEeccCC--------------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSGWV-------------------- 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~~~-------------------- 169 (251)
+.+.++.=.++++ +.-....++.++|||-|+++.+.+.-.... .+..++++-|..
T Consensus 91 L~~QV~HKlaFik---~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~ 167 (301)
T KOG3975|consen 91 LQDQVDHKLAFIK---EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLP 167 (301)
T ss_pred hhhHHHHHHHHHH---HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeeh
Confidence 4444444444444 233346799999999999999998864332 233334333311
Q ss_pred -----------CCcchhhh---------------hhc---------------------------------ccCCCCCEEE
Q 025550 170 -----------PFNASLID---------------QFT---------------------------------SDAKKTPILW 190 (251)
Q Consensus 170 -----------~~~~~~~~---------------~~~---------------------------------~~~~~~p~l~ 190 (251)
...+.+.+ .+. -++...-+.+
T Consensus 168 hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~F 247 (301)
T KOG3975|consen 168 HVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWF 247 (301)
T ss_pred hhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEE
Confidence 00000000 000 0124567889
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHH
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRN 237 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~ 237 (251)
.+|+.|..+|.+..+.+.+.+.+. ++++.+ +++.|.|.....+.
T Consensus 248 yygt~DgW~p~~~~d~~kdd~~ee--d~~Lde-dki~HAFV~~~~q~ 291 (301)
T KOG3975|consen 248 YYGTNDGWVPSHYYDYYKDDVPEE--DLKLDE-DKIPHAFVVKHAQY 291 (301)
T ss_pred EccCCCCCcchHHHHHHhhhcchh--ceeecc-ccCCcceeecccHH
Confidence 999999999988776677776664 456665 67899886444333
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.5e-05 Score=61.69 Aligned_cols=205 Identities=14% Similarity=0.118 Sum_probs=115.4
Q ss_pred EEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCc-------hhhhhhhcCCCcceEEEEccCCCCCCc
Q 025550 10 FTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPAN-------EPIKTLFTSPEFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~ 82 (251)
..++..++..+++..+..+ ..++...|+++-|-++.-+.. ..+.+.....+..++.+.|||.+.+.
T Consensus 114 Rv~Iq~D~~~IDt~~I~~~------~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~- 186 (365)
T PF05677_consen 114 RVPIQYDGVKIDTMAIHQP------EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST- 186 (365)
T ss_pred eEEEeeCCEEEEEEEeeCC------CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC-
Confidence 3466678888888776532 235667899999977654441 12445555678899999999775431
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----C
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----K 158 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~ 158 (251)
+.....++..+...+...+.+. ..++.+++|++.|||+||.++..++.++.. .
T Consensus 187 ----------------------G~~s~~dLv~~~~a~v~yL~d~-~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dg 243 (365)
T PF05677_consen 187 ----------------------GPPSRKDLVKDYQACVRYLRDE-EQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDG 243 (365)
T ss_pred ----------------------CCCCHHHHHHHHHHHHHHHHhc-ccCCChheEEEeeccccHHHHHHHHHhcccccCCC
Confidence 1223344444444443333211 356788999999999999998876555432 2
Q ss_pred cceEEEec-cCCCCcchhhhh-------------------hcccCCCCCEEEEccCC-------CCcccchhcccchHHH
Q 025550 159 LGGGAIFS-GWVPFNASLIDQ-------------------FTSDAKKTPILWSHGMA-------DRTVLFEAGQAGPPFL 211 (251)
Q Consensus 159 ~~~~i~~~-~~~~~~~~~~~~-------------------~~~~~~~~p~l~~~g~~-------D~~~~~~~~~~~~~~l 211 (251)
++=++.-. ++.......... -......+|=+++++.+ |..++.+. .++..+
T Consensus 244 i~~~~ikDRsfssl~~vas~~~~~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~--~lA~~~ 321 (365)
T PF05677_consen 244 IRWFLIKDRSFSSLAAVASQFFGPIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPEN--CLAAAF 321 (365)
T ss_pred eeEEEEecCCcchHHHHHHHHHHHHHHHHHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcch--hhHHHh
Confidence 33222221 111111100000 01134779999998875 55555544 345555
Q ss_pred HhcC------CeeEEEEeCCCCCC--CCHHHHHHHHHHHHHhh
Q 025550 212 EQAG------ISCEFKAYPGLGHS--ISNEELRNLESWIKTRM 246 (251)
Q Consensus 212 ~~~~------~~~~~~~~~g~~H~--~~~~~~~~~~~~l~~~l 246 (251)
.+.. .+..++.-....|. +..+..+.+..-|.+++
T Consensus 322 l~~~~~~~~~~~Ki~i~~~~l~H~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 322 LDPPTAEKLSGKKIPIGERLLLHNEPLDDETIQALAEHILDHF 364 (365)
T ss_pred cCCcccccccccceecccccccccccCChHHHHHHHHHHHhhc
Confidence 4421 12333333334564 44556777777777665
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-07 Score=68.47 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=52.1
Q ss_pred EEEEEecCCC-CCCCchhhhhhhcCCCcc---eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 41 FILWLHGLGD-SGPANEPIKTLFTSPEFK---LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 41 ~vv~~HG~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.|||+||.++ ....|..+++.|+++||. ++.++|-..... .. ........+.+
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~-----------~~------------~~~~~~~~~~~ 59 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS-----------PS------------VQNAHMSCESA 59 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH-----------TH------------HHHHHB-HHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC-----------Cc------------ccccccchhhH
Confidence 5899999998 668899999999999999 588777422110 00 00001122334
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.++++|+..+.. ... +|=|+||||||.++-.+...
T Consensus 60 ~~l~~fI~~Vl~~-TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 60 KQLRAFIDAVLAY-TGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHH-HT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hCC-EEEEEEcCCcCHHHHHHHHH
Confidence 6777777765422 245 89999999999999877653
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.8e-07 Score=69.47 Aligned_cols=158 Identities=14% Similarity=0.189 Sum_probs=95.1
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
.+.++++.++++..+.... +.......+||++-|-.+ .|+- ....-.+.||.++.+..||-..+...
T Consensus 218 kiks~dgneiDtmF~d~r~---n~~~ngq~LvIC~EGNAG---FYEvG~m~tP~~lgYsvLGwNhPGFagSTG~------ 285 (517)
T KOG1553|consen 218 KIKSSDGNEIDTMFLDGRP---NQSGNGQDLVICFEGNAG---FYEVGVMNTPAQLGYSVLGWNHPGFAGSTGL------ 285 (517)
T ss_pred EEeecCCcchhheeecCCC---CCCCCCceEEEEecCCcc---ceEeeeecChHHhCceeeccCCCCccccCCC------
Confidence 4455666677766555321 123334578888888443 2322 33344458999999999965442110
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
+... .-.++++ .+++..+ ..+...+.|++.|+|.||..+.++|..||+ ++++|+-+.+
T Consensus 286 ----------------P~p~-n~~nA~D---aVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 286 ----------------PYPV-NTLNAAD---AVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred ----------------CCcc-cchHHHH---HHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 1111 1112222 2222222 567788999999999999999999999996 8999977664
Q ss_pred CCCcchhhhhh----------------------cccCCCCCEEEEccCCCCcccc
Q 025550 169 VPFNASLIDQF----------------------TSDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 169 ~~~~~~~~~~~----------------------~~~~~~~p~l~~~g~~D~~~~~ 201 (251)
-+...-....+ .....+.|+.++.-++|+++..
T Consensus 345 DDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 345 DDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred hhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 43221111000 0123788999999999887653
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.5e-06 Score=66.24 Aligned_cols=186 Identities=13% Similarity=0.150 Sum_probs=107.4
Q ss_pred CCccEEEEEecCCCCCCC-chhhhhhhcCCCcceE--EEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLT--KWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..+.+++|+||++.+-.+ -...++.....|+..+ .|-.|..+. . -++..|.+...
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~----------------l------~~Yn~DreS~~ 171 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGS----------------L------LGYNYDRESTN 171 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCe----------------e------eecccchhhhh
Confidence 566899999999865444 3335565555666554 444443221 0 11144667777
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccCCCCcchhhhhhcccCCC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGWVPFNASLIDQFTSDAKK 185 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 185 (251)
.+...|..++..+.+. ...++|.|++||||.++++....+. +..++-+|+.++-.+..--..+...-.+..
T Consensus 172 ~Sr~aLe~~lr~La~~-~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~~Q~~~mg~~~ 250 (377)
T COG4782 172 YSRPALERLLRYLATD-KPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFSSQIAAMGKPD 250 (377)
T ss_pred hhHHHHHHHHHHHHhC-CCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHHHHHHHhcCCC
Confidence 7777888877776532 2467999999999999999776542 335888999888776543322222223344
Q ss_pred CCEEEEccCCCC--------------cccchhcccchHHHHhcCCe-eEEEEeC---CCCCCCCHHHHHHHHHHHHHhhc
Q 025550 186 TPILWSHGMADR--------------TVLFEAGQAGPPFLEQAGIS-CEFKAYP---GLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 186 ~p~l~~~g~~D~--------------~~~~~~~~~~~~~l~~~~~~-~~~~~~~---g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.|+-++...+|. +-....+...+ .+...|+. +++-... +..|....+..+.+ +|+...+.
T Consensus 251 ~~ft~~~s~dDral~~s~~i~g~~~Rlga~d~~~~~~-~l~~~gisvVDls~~k~~d~l~h~k~a~~p~lv-~lig~r~~ 328 (377)
T COG4782 251 PPFTLFVSRDDRALALSRRISGDVPRLGAIDPSADPY-ALASGGISVVDLSKVKASDGLNHGKFADSPELV-RLIGSRLI 328 (377)
T ss_pred CCeeEEecccchhhccccccccCCcccccCCcccchH-HHHhCCcEEEEccccccccccccchhccChhHH-Hhhhhhcc
Confidence 455554444443 22222222222 45555443 3332222 23576666666666 88877664
|
|
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.3e-05 Score=60.45 Aligned_cols=180 Identities=14% Similarity=0.118 Sum_probs=113.1
Q ss_pred CccEEEEEecCCCCCCC-chhhhh-----hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 38 ARNFILWLHGLGDSGPA-NEPIKT-----LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
++|++|=.|..|-+... |..+.. .+..+ |.++.++.||.-..-..... ......
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~-------------------~y~yPs 104 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE-------------------GYPYPS 104 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC-------------------CCCCCC
Confidence 67889999999976544 444222 34444 88899998865432111111 112345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------ 173 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------ 173 (251)
+++..+.|..+++ ..+ -+.++-+|--.|+++-..+|+.+|+++-|+|++++......
T Consensus 105 md~LAd~l~~VL~---~f~--lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~G 179 (326)
T KOG2931|consen 105 MDDLADMLPEVLD---HFG--LKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYG 179 (326)
T ss_pred HHHHHHHHHHHHH---hcC--cceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhc
Confidence 5555666666666 333 45789999999999999999999999999999986221100
Q ss_pred -----------------------hhhhhh--------c--------------------c----cCCCCCEEEEccCCCCc
Q 025550 174 -----------------------SLIDQF--------T--------------------S----DAKKTPILWSHGMADRT 198 (251)
Q Consensus 174 -----------------------~~~~~~--------~--------------------~----~~~~~p~l~~~g~~D~~ 198 (251)
++.+.+ . . ...++|++++.|+.-+.
T Consensus 180 mt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~ 259 (326)
T KOG2931|consen 180 MTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPH 259 (326)
T ss_pred hhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCch
Confidence 000000 0 0 12569999999988766
Q ss_pred ccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 199 VLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+. .+.....+|.. ....+....++|=....+.+.++.+-++=++
T Consensus 260 ~~--~vv~~n~~Ldp--~~ttllk~~d~g~l~~e~qP~kl~ea~~~Fl 303 (326)
T KOG2931|consen 260 VS--AVVECNSKLDP--TYTTLLKMADCGGLVQEEQPGKLAEAFKYFL 303 (326)
T ss_pred hh--hhhhhhcccCc--ccceEEEEcccCCcccccCchHHHHHHHHHH
Confidence 44 33444455543 2468888888887776656555555444444
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.6e-06 Score=65.72 Aligned_cols=134 Identities=16% Similarity=0.166 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC-CCcc---------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV-PFNA--------------- 173 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~-~~~~--------------- 173 (251)
.....+++.+.+.+.+ ..+++.++.+|.|.|==|..++.+|+.. +++++++.+.-.. ....
T Consensus 150 ka~vrAMD~vq~~~~~--~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~ 226 (367)
T PF10142_consen 150 KAAVRAMDAVQEFLKK--KFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSF 226 (367)
T ss_pred HHHHHHHHHHHHHHHh--hcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccCCcHHHHHHHHHHhCCCCcc
Confidence 3444555555555443 2466788999999999999999998855 5788887664211 1100
Q ss_pred ---hhh-----hhh----------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 174 ---SLI-----DQF----------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 174 ---~~~-----~~~----------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
+.. ..+ -..+..+|.+++.|..|++..++.+.-+++.|.+ +..+..+|+++|.
T Consensus 227 a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G---~K~lr~vPN~~H~ 303 (367)
T PF10142_consen 227 AFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG---EKYLRYVPNAGHS 303 (367)
T ss_pred chhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC---CeeEEeCCCCCcc
Confidence 000 000 0124789999999999999999999999999876 6789999999998
Q ss_pred CCH-HHHHHHHHHHHHhhcCC
Q 025550 230 ISN-EELRNLESWIKTRMSCS 249 (251)
Q Consensus 230 ~~~-~~~~~~~~~l~~~l~~~ 249 (251)
... +..+.+..|+...+.++
T Consensus 304 ~~~~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 304 LIGSDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred cchHHHHHHHHHHHHHHHcCC
Confidence 875 44677888888876644
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.46 E-value=3e-06 Score=64.29 Aligned_cols=163 Identities=15% Similarity=0.171 Sum_probs=104.9
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+||++--.|....+.....+..++.|+.++.+-.|.... -.....+...++.+
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~--------------------------~~~~~~~~~~~~~l 54 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADF--------------------------FWPSKRLAPAADKL 54 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHH--------------------------eeeccchHHHHHHH
Confidence 4555555555555556667777777999998877652100 00013444555555
Q ss_pred HHHHHHHHHcCCCC-CcEEEEEeChhHHHHHHHHHh---------cC-CCcceEEEeccCCCCcc-------------h-
Q 025550 120 HAMIDKEVAAGIDP-NNVFVCGFSQGGALTLASVLL---------YP-RKLGGGAIFSGWVPFNA-------------S- 174 (251)
Q Consensus 120 ~~~i~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~---------~p-~~~~~~i~~~~~~~~~~-------------~- 174 (251)
.+.+.+ ..-.. .++.+-.+|.||...+..... .+ ..++++|.-|+...... .
T Consensus 55 ~~~l~~---~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~ 131 (240)
T PF05705_consen 55 LELLSD---SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSS 131 (240)
T ss_pred HHHhhh---hccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccc
Confidence 555542 22222 389999999988877655441 11 12788887665322110 0
Q ss_pred ------hhh------------------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 175 ------LID------------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 175 ------~~~------------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
... ........+|-+.++++.|.+++.+..++..+..++.|.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V 211 (240)
T PF05705_consen 132 PRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDV 211 (240)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeE
Confidence 000 00012356899999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCC
Q 025550 219 EFKAYPGLGHSIS 231 (251)
Q Consensus 219 ~~~~~~g~~H~~~ 231 (251)
+...+++..|.-+
T Consensus 212 ~~~~f~~S~HV~H 224 (240)
T PF05705_consen 212 RAEKFEDSPHVAH 224 (240)
T ss_pred EEecCCCCchhhh
Confidence 9999999998654
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.6e-07 Score=67.48 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=53.4
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
++.-+||++||..++..+|..+.+.+... .+....+.+..... .......++..
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~------------------------n~~~T~~gI~~ 57 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSN------------------------NEFKTFDGIDV 57 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccc------------------------cccccchhhHH
Confidence 45578999999999999998877765541 22221222111000 00122344454
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
..+.+.+.+.... .......+|.++|||+||.++-.+..
T Consensus 58 ~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 58 CGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 5555544444332 22222368999999999999876554
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=2e-06 Score=64.99 Aligned_cols=101 Identities=16% Similarity=0.155 Sum_probs=72.4
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|.++++|+.++....|..++..+... ..++.++.|+... .......+.+.++..
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~-------------------------~~~~~~~l~~~a~~y 54 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGA-------------------------GEQPFASLDDMAAAY 54 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccc-------------------------cccccCCHHHHHHHH
Confidence 56899999999999999999988755 7788888774321 123445566666666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCC
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVP 170 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~ 170 (251)
.+.|... . +..++.|.|||+||.+|..+|.+. .+.+.-++++....+
T Consensus 55 v~~Ir~~---Q-P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 55 VAAIRRV---Q-PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHh---C-CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 6666533 2 456899999999999999998764 234666666655544
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.7e-07 Score=61.74 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=69.9
Q ss_pred CcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh----------------hhh-----cccCCCCCEEEEc
Q 025550 134 NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI----------------DQF-----TSDAKKTPILWSH 192 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~----------------~~~-----~~~~~~~p~l~~~ 192 (251)
.+..+.|.||||..+..+..++|+.+.++|++||..+...-+. ..+ -..-....+.+.+
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~dp~~l~rlr~~~~vfc~ 180 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLADPFRLERLRRIDMVFCI 180 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcChHHHHHHhhccEEEEe
Confidence 4578999999999999999999999999999999554321110 000 0112456788899
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
|..|+..+ +.+.+.+.|.++.++..+.+..|..|..
T Consensus 181 G~e~~~L~--~~~~L~~~l~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 181 GDEDPFLD--NNQHLSRLLSDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred cCcccccc--chHHHHHHhccccccHHHHHhccccccc
Confidence 99988866 3457888888887887777787777764
|
|
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-05 Score=58.35 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=66.2
Q ss_pred CCCccEEEEEecCCCCC--CCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG--PAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+-.+..|||+-|.|..- -.| ..+.+++.+.+|..+.+..+.++. |++ .-.+
T Consensus 33 gv~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~-------G~G-------------------t~sl 86 (299)
T KOG4840|consen 33 GVESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN-------GYG-------------------TFSL 86 (299)
T ss_pred CceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc-------ccc-------------------cccc
Confidence 33457788888877432 223 337778889999888777664432 211 1122
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccCC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGWV 169 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~~ 169 (251)
.+.++++..+++++...+. ...|+++|||-|+.-.+++..+ -+..+.+.|+.+|..
T Consensus 87 k~D~edl~~l~~Hi~~~~f-St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 87 KDDVEDLKCLLEHIQLCGF-STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred cccHHHHHHHHHHhhccCc-ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 2335556666665443333 3489999999999988877633 244567777676644
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-05 Score=62.75 Aligned_cols=115 Identities=18% Similarity=0.184 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCC--CCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh----------
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGID--PNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI---------- 176 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~---------- 176 (251)
...+-++++.+.++..-.....-. .-+++++|+|.||+++...|--.|-.+.+++--|++..+.....
T Consensus 157 N~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y 236 (403)
T PF11144_consen 157 NFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKY 236 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccc
Confidence 344555555555444322222212 24899999999999999999889998999998888664311100
Q ss_pred ----h-----h--------------------hc------------------ccC-CCCCEEEEccCCCCcccchhcccch
Q 025550 177 ----D-----Q--------------------FT------------------SDA-KKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 177 ----~-----~--------------------~~------------------~~~-~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
. . +. ... .++-.+..|+..|...|.+.-+.++
T Consensus 237 ~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~ 316 (403)
T PF11144_consen 237 ICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELY 316 (403)
T ss_pred cccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHH
Confidence 0 0 00 001 3344556999999999999999999
Q ss_pred HHHHhcCCeeEEEEe
Q 025550 209 PFLEQAGISCEFKAY 223 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~ 223 (251)
+.+++.|.+++++.+
T Consensus 317 ~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 317 EILKNLGFDATLHLI 331 (403)
T ss_pred HHHHHcCCCeEEEEe
Confidence 999999999999888
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.0001 Score=54.84 Aligned_cols=177 Identities=14% Similarity=0.166 Sum_probs=98.4
Q ss_pred CccEEEEEecCC-CC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLG-DS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~-~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+..+|=|+-|.. +. .-.|+.+.+.|.++||.+++.=|... -....-..+
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t----------------------------fDH~~~A~~ 67 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT----------------------------FDHQAIARE 67 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC----------------------------CcHHHHHHH
Confidence 445555555532 22 23477788889999999887666421 001122223
Q ss_pred HHHHHHHHHHHHH-HcCCCC--CcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc-------CCCC-------------
Q 025550 115 AVRNVHAMIDKEV-AAGIDP--NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG-------WVPF------------- 171 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~-------~~~~------------- 171 (251)
.....+..++.+. +.+.+. -++.=+|||+|+-+-+.+...++..-++-+++|= .++.
T Consensus 68 ~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~ 147 (250)
T PF07082_consen 68 VWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFT 147 (250)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCcc
Confidence 3333333343333 233332 2677899999999999888776544455444442 1111
Q ss_pred --cchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe-eEEEEeCCCCCCCCH------------HHHH
Q 025550 172 --NASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS-CEFKAYPGLGHSISN------------EELR 236 (251)
Q Consensus 172 --~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~~H~~~~------------~~~~ 236 (251)
.......+.....-...+++.-.+|.+ +++..+.+.|++...+ ++....+| .|.... .-.+
T Consensus 148 PsP~ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~~ftP~d 223 (250)
T PF07082_consen 148 PSPEETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGSSFTPLD 223 (250)
T ss_pred CCHHHHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCCccCchH
Confidence 111111122222445567777777765 4666778888765333 67788886 896431 1157
Q ss_pred HHHHHHHHhh
Q 025550 237 NLESWIKTRM 246 (251)
Q Consensus 237 ~~~~~l~~~l 246 (251)
.+.+|+++.+
T Consensus 224 a~~q~~k~~~ 233 (250)
T PF07082_consen 224 AVGQWLKQEV 233 (250)
T ss_pred HHHHHHHHHH
Confidence 7777777654
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.6e-06 Score=64.17 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=48.8
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-------HHHHHHHHHHHHhh
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------EELRNLESWIKTRM 246 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l 246 (251)
+|+++++|.+|..+|...+..+++..+.. +.+...+++++|.... +..+++.+|+.+.+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999888888887775 5677888888997651 35788889988875
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.1e-06 Score=67.50 Aligned_cols=92 Identities=10% Similarity=-0.003 Sum_probs=61.0
Q ss_pred CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC
Q 025550 51 SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG 130 (251)
Q Consensus 51 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 130 (251)
....|..+++.|.+.||.. ..|++++| ++|- . .....+..+.+.+.++.+.+.
T Consensus 106 ~~~~~~~li~~L~~~GY~~-~~dL~g~g------------YDwR------------~-~~~~~~~~~~Lk~lIe~~~~~- 158 (440)
T PLN02733 106 EVYYFHDMIEQLIKWGYKE-GKTLFGFG------------YDFR------------Q-SNRLPETMDGLKKKLETVYKA- 158 (440)
T ss_pred hHHHHHHHHHHHHHcCCcc-CCCcccCC------------CCcc------------c-cccHHHHHHHHHHHHHHHHHH-
Confidence 3456777888999999855 56666543 2221 0 011334456666666655422
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCC
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWV 169 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~ 169 (251)
...+++.|+||||||.++..++..+|+. ++.+|.+++..
T Consensus 159 ~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 159 SGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred cCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCC
Confidence 2356899999999999999999888764 67888887644
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.7e-05 Score=55.34 Aligned_cols=165 Identities=12% Similarity=0.080 Sum_probs=89.6
Q ss_pred EEecCC--CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHH
Q 025550 44 WLHGLG--DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121 (251)
Q Consensus 44 ~~HG~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (251)
++|..+ ++...|..+...+. ..+.++.++.++.... .....++...++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~-------------------------~~~~~~~~~~~~~~~~ 55 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPG-------------------------EPLPASADALVEAQAE 55 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCC-------------------------CCCCCCHHHHHHHHHH
Confidence 344433 44556777777776 4678888888855221 0011122222333333
Q ss_pred HHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcch-------h----------------
Q 025550 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNAS-------L---------------- 175 (251)
Q Consensus 122 ~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~~-------~---------------- 175 (251)
.+.. .....++.++|||+||.++..++.+. +..+.+++.+....+.... .
T Consensus 56 ~l~~----~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (212)
T smart00824 56 AVLR----AAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDD 131 (212)
T ss_pred HHHH----hcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccc
Confidence 2221 12346799999999999998888763 4457777766543321100 0
Q ss_pred ------------hhhhcccCCCCCEEEEccCCCCcc-cchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHH
Q 025550 176 ------------IDQFTSDAKKTPILWSHGMADRTV-LFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESW 241 (251)
Q Consensus 176 ------------~~~~~~~~~~~p~l~~~g~~D~~~-~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~ 241 (251)
...+.......|+.++.++.|... +......+.+ ......+.+.++| +|... .+....+.+-
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~---~~~~~~~~~~~~g-~H~~~~~~~~~~~~~~ 207 (212)
T smart00824 132 ARLTAMGAYLRLFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRA---HWPLPHTVVDVPG-DHFTMMEEHAAATARA 207 (212)
T ss_pred hhhhHHHHHHHHhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccC---CCCCCceeEEccC-chHHHHHHhHHHHHHH
Confidence 000112346789999999988653 2122122222 1233578888997 88764 3344444443
Q ss_pred H
Q 025550 242 I 242 (251)
Q Consensus 242 l 242 (251)
+
T Consensus 208 ~ 208 (212)
T smart00824 208 V 208 (212)
T ss_pred H
Confidence 3
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.7e-05 Score=55.72 Aligned_cols=70 Identities=19% Similarity=0.022 Sum_probs=49.1
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~ 201 (251)
+..++.++|||+||.+|..++..... ....++.+++.......+............+..++...|.+...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~~~D~v~~~ 99 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVNDNDIVPRL 99 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEECCCccCCC
Confidence 56799999999999999998887654 46667777776655544332111233456788889999976543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.5e-05 Score=63.46 Aligned_cols=100 Identities=17% Similarity=0.211 Sum_probs=68.6
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcc---eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFK---LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..-.++++||++.....+..+...+...|+. ++.+.+++. . .......
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~----------------------------~~~~~~~ 108 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-D----------------------------GTYSLAV 108 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-C----------------------------CCccccc
Confidence 3447999999988888888888888888887 666666532 0 0111112
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~ 167 (251)
..+.+...++.... ....+++.++|||+||..+.+++...+ ..++.++.+++
T Consensus 109 ~~~ql~~~V~~~l~-~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 109 RGEQLFAYVDEVLA-KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred cHHHHHHHHHHHHh-hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 23344444443331 123579999999999999999988887 67888888876
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.7e-05 Score=66.43 Aligned_cols=112 Identities=21% Similarity=0.185 Sum_probs=71.9
Q ss_pred ccEEEEEecCCC---CCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 39 RNFILWLHGLGD---SGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 39 ~~~vv~~HG~~~---~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
.|++|++||++- ++..+.. ....+......++.+.||...-...+++.. ...+.....|..
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~--------------~~~gN~gl~Dq~ 177 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDS--------------AAPGNLGLFDQL 177 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCC--------------CCCCcccHHHHH
Confidence 899999999873 2222322 222455557778888888653321111110 112344556778
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEecc
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSG 167 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~ 167 (251)
.+++++.+.|. ..+-|+++|.|+|||.||..+..++... ...+..+|..||
T Consensus 178 ~AL~wv~~~I~---~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 178 LALRWVKDNIP---SFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred HHHHHHHHHHH---hcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 88888888887 6788999999999999999987666532 123555565655
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00028 Score=55.90 Aligned_cols=157 Identities=13% Similarity=0.190 Sum_probs=88.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.-.-||+.|-|+-...-+..++.|+++|+.++.+|--. +-| ...+-++..++
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLR--------------YfW--------------~~rtPe~~a~D 311 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLR--------------YFW--------------SERTPEQIAAD 311 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhh--------------hhh--------------ccCCHHHHHHH
Confidence 34567777877766555668889999999999988431 122 22233334445
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----------------cceEEEeccCCCCcchhhhhhccc
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----------------LGGGAIFSGWVPFNASLIDQFTSD 182 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----------------~~~~i~~~~~~~~~~~~~~~~~~~ 182 (251)
+..++.... ......++.|+|+|+|+-+--.+..+.|.. ..-=+.+.+|+.....-.....+.
T Consensus 312 l~r~i~~y~-~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~ 390 (456)
T COG3946 312 LSRLIRFYA-RRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGAGDVVPD 390 (456)
T ss_pred HHHHHHHHH-HhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCCCCcchh
Confidence 555554432 223567999999999998776555444422 122345566665543321111111
Q ss_pred ---CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH
Q 025550 183 ---AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234 (251)
Q Consensus 183 ---~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~ 234 (251)
.....+.-++|.+|+-..+. .++..| ++.+..|| ||.|..+.
T Consensus 391 ~~~l~~~~v~CiYG~~e~d~~Cp-------~l~~~~--~~~v~lpG-gHHFd~dy 435 (456)
T COG3946 391 IAKLPLARVQCIYGQEEKDTACP-------SLKAKG--VDTVKLPG-GHHFDGDY 435 (456)
T ss_pred hhhCCcceeEEEecCccccccCC-------cchhhc--ceeEecCC-CcccCccH
Confidence 12234556777665432211 122322 46778998 78776443
|
|
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.98 E-value=7.9e-05 Score=62.05 Aligned_cols=128 Identities=13% Similarity=0.063 Sum_probs=82.4
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEe--cCCCC---CCCchhhhh---hhcCCCcceEEEEccCCCCCCccc
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLH--GLGDS---GPANEPIKT---LFTSPEFKLTKWSFPSAPNNPVTC 84 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~H--G~~~~---~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~ 84 (251)
...++..+.+-+.-| ....+.|+++..+ -+.-. ........+ .++.+||.++..|.+|...+.
T Consensus 25 ~MRDGvrL~~dIy~P------a~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se--- 95 (563)
T COG2936 25 PMRDGVRLAADIYRP------AGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE--- 95 (563)
T ss_pred EecCCeEEEEEEEcc------CCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC---
Confidence 345565554433331 2347889999998 33322 111222334 688999999999999876542
Q ss_pred CCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE
Q 025550 85 NYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI 164 (251)
Q Consensus 85 ~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~ 164 (251)
| .+-... .+..+|-.+.++++.+ + .....+|+.+|.|++|...+++|+..|..+++++.
T Consensus 96 --G----~~~~~~--------~~E~~Dg~D~I~Wia~------Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p 154 (563)
T COG2936 96 --G----VFDPES--------SREAEDGYDTIEWLAK------Q-PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAP 154 (563)
T ss_pred --c----ccceec--------cccccchhHHHHHHHh------C-CccCCeeeeecccHHHHHHHHHHhcCCchheeecc
Confidence 1 110000 1234555555666654 2 23457999999999999999999999989999998
Q ss_pred eccCCC
Q 025550 165 FSGWVP 170 (251)
Q Consensus 165 ~~~~~~ 170 (251)
.++..+
T Consensus 155 ~~~~~D 160 (563)
T COG2936 155 TEGLVD 160 (563)
T ss_pred cccccc
Confidence 887554
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00016 Score=56.53 Aligned_cols=100 Identities=24% Similarity=0.294 Sum_probs=62.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCC---C------cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSP---E------FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASS 105 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~---g------~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~ 105 (251)
..++...++++||+.++-..|..++..|... | |.|+++-.||. .|-+..
T Consensus 148 ~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGy--------------gwSd~~-------- 205 (469)
T KOG2565|consen 148 KKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGY--------------GWSDAP-------- 205 (469)
T ss_pred cCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCc--------------ccCcCC--------
Confidence 3344457899999999998888888877655 2 33344444432 221111
Q ss_pred CCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceE
Q 025550 106 PKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGG 162 (251)
Q Consensus 106 ~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~ 162 (251)
...--...+.+ .++.+++ +.+ -++..|-|-.+|..++..+|..+|+.+.|.
T Consensus 206 sk~GFn~~a~A----rvmrkLMlRLg--~nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 206 SKTGFNAAATA----RVMRKLMLRLG--YNKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred ccCCccHHHHH----HHHHHHHHHhC--cceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 11111122222 2333333 444 568999999999999999999999987665
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=6.6e-05 Score=61.92 Aligned_cols=108 Identities=21% Similarity=0.275 Sum_probs=71.9
Q ss_pred CCCCCccEEEEEecCCC---CCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 34 QNPMARNFILWLHGLGD---SGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
|..+.+-+|+-+||+|. ++..-+. +..+-.+.|..++.+||..+|+.|+ ++..
T Consensus 391 P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPF-----------------------PRal 447 (880)
T KOG4388|consen 391 PAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPF-----------------------PRAL 447 (880)
T ss_pred CCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCC-----------------------CcHH
Confidence 33445568899999883 2223233 4445566799999999999888653 3455
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cCCCcceEEEecc
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSG 167 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~ 167 (251)
+.+.-+..|+...-. ..+...+||++.|-|.||.+.+..+++ .-....|+++..+
T Consensus 448 eEv~fAYcW~inn~a---llG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 448 EEVFFAYCWAINNCA---LLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred HHHHHHHHHHhcCHH---HhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 666666666655444 456678999999999999987766554 2233456655543
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00032 Score=58.43 Aligned_cols=64 Identities=19% Similarity=0.275 Sum_probs=51.5
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc-C-C------eeEEEEeCCCCCCCC------HHHHHHHHHHHHHhhc
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA-G-I------SCEFKAYPGLGHSIS------NEELRNLESWIKTRMS 247 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-~-~------~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l~ 247 (251)
....+++.||..|.++++..+..+++++.+. + . -+++...||++|... .+.+..+.+|+++=..
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 4579999999999999999999999888764 2 1 288999999999643 4568889999986544
|
It also includes several bacterial homologues of unknown function. |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00014 Score=59.25 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC------CcceEEEeccCCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR------KLGGGAIFSGWVP 170 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~i~~~~~~~ 170 (251)
........|+..|+...+.. .++++|+||||||.++..+....+. .++++|.+++...
T Consensus 98 ~~~~~~~~lk~~ie~~~~~~--~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 98 ERDEYFTKLKQLIEEAYKKN--GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred hHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 34455667777777655333 6799999999999999988877643 4889999887543
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00055 Score=56.98 Aligned_cols=65 Identities=15% Similarity=0.107 Sum_probs=47.1
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHH-------------------h--cC-----C-----eeEEEEeCCCCCCCCHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLE-------------------Q--AG-----I-----SCEFKAYPGLGHSISNE 233 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~-------------------~--~~-----~-----~~~~~~~~g~~H~~~~~ 233 (251)
..+|++..|+.|.+++....+++.+.|+ . .| . ..++..++++||....+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 4799999999999888765554444443 0 01 1 35677788999999988
Q ss_pred HHHHHHHHHHHhhcCC
Q 025550 234 ELRNLESWIKTRMSCS 249 (251)
Q Consensus 234 ~~~~~~~~l~~~l~~~ 249 (251)
.++.+.+.+.+++..+
T Consensus 444 ~P~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 444 QPAVALTMINRFLRNR 459 (462)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 8888888888887654
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00053 Score=56.85 Aligned_cols=116 Identities=20% Similarity=0.099 Sum_probs=63.9
Q ss_pred ccEEEEEecCCCCCCCch---hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANE---PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|++|++-|-+.-...+. .+.+...+.|-.++.+..|-. |.+.+-- +... ..-..-..+++
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyY---------G~S~P~~-~~s~------~nL~yLt~~QA 92 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYY---------GKSQPFG-DLST------ENLRYLTSEQA 92 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTS---------TTB-TTG-GGGG------STTTC-SHHHH
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhh---------cCCCCcc-ccch------hhHHhcCHHHH
Confidence 688888877553211111 122233334556667777633 4333211 0000 12233567777
Q ss_pred HHHHHHHHHHHH-HcC-CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 116 VRNVHAMIDKEV-AAG-IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
++++..+++.+. +.. .+..+++++|-|+||.++..+-.++|+.+.|.++-|+.+.
T Consensus 93 LaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 777777777665 332 2456899999999999999999999999999999888654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0034 Score=51.27 Aligned_cols=177 Identities=16% Similarity=0.161 Sum_probs=98.1
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
|++-+.|+.|++-|+.. .+-++.+- .+.+.|.+.+.+-=|.- .+| . . .-..+.++
T Consensus 284 PGD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRl-------eGG-a---F------------YlGs~eyE 338 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRL-------EGG-A---F------------YLGSDEYE 338 (511)
T ss_pred CcCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeecccc-------ccc-e---e------------eeCcHHHH
Confidence 67889999999999775 55554421 13334555554432210 011 0 0 11222332
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------ 174 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------ 174 (251)
+.+.+.|++.+ ..+.+.+.++|.|.|||..-|+++++... ..|||.--|.......
T Consensus 339 ---~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDv 413 (511)
T TIGR03712 339 ---QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDI 413 (511)
T ss_pred ---HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccchhhhhccccccCCCCCchHHHh
Confidence 23333444333 77889999999999999999999988753 3455543332221100
Q ss_pred -------------------hhhhhcc-cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH
Q 025550 175 -------------------LIDQFTS-DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234 (251)
Q Consensus 175 -------------------~~~~~~~-~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~ 234 (251)
+.+.+.. .-.++...+.+=.+|.. +......+.+.+.+.++++--+-++| -|. +.
T Consensus 414 l~~~~g~~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDY-D~~A~~~L~~~l~~~~~~v~~kG~~G-RHN---Dd 488 (511)
T TIGR03712 414 LLLNTGGTSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDY-DPTAFQDLLPYLSKQGAQVMSKGIPG-RHN---DD 488 (511)
T ss_pred HHhhcCCCCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccC-CHHHHHHHHHHHHhcCCEEEecCCCC-CCC---CC
Confidence 0011111 22566666666666654 44556678888887776655555554 453 44
Q ss_pred HHHHHHHHHHh
Q 025550 235 LRNLESWIKTR 245 (251)
Q Consensus 235 ~~~~~~~l~~~ 245 (251)
...+..|+..+
T Consensus 489 s~~i~~WF~n~ 499 (511)
T TIGR03712 489 SPTVNSWFINF 499 (511)
T ss_pred chHHHHHHHHH
Confidence 44555555444
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0013 Score=50.72 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=58.5
Q ss_pred cEEEEEecCC--CCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 40 NFILWLHGLG--DSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 40 ~~vv~~HG~~--~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..||++||.| .....+..+.+.+.. .+..+..+-. +. + ...+|+ ..-.+.+....
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~---------~-~~~s~~-----------~~~~~Qv~~vc 84 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GN---------G-VQDSLF-----------MPLRQQASIAC 84 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CC---------C-cccccc-----------cCHHHHHHHHH
Confidence 4588899999 444566667776652 3665554431 11 0 001111 11123333333
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEecc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSG 167 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~ 167 (251)
+.+.. ...+ .+-+-++|+|+||.++-.++.+.|+ .++.+|.++|
T Consensus 85 e~l~~-~~~L------~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 85 EKIKQ-MKEL------SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred HHHhc-chhh------cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 33333 2211 2348899999999999999998776 4888888876
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00049 Score=58.98 Aligned_cols=44 Identities=25% Similarity=0.373 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHHHH---Hc--CCC---CCcEEEEEeChhHHHHHHHHH
Q 025550 110 SSLLKAVRNVHAMIDKEV---AA--GID---PNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~---~~--~~~---~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
..+.+..+++.+.|+.++ +. +.+ ++.|+++||||||.+|..++.
T Consensus 150 ~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 150 HILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 344455555555555443 22 223 667999999999988875543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0069 Score=43.36 Aligned_cols=89 Identities=8% Similarity=0.004 Sum_probs=57.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc-CCCCcchhhhhhcccCCCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG-WVPFNASLIDQFTSDAKKT 186 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~ 186 (251)
......+....|..+++.+....-+..++.++|||+|..++-.++...+..+..++.+++ .+.... ...+.. ...
T Consensus 83 ~~~~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~--a~~l~~--~~~ 158 (177)
T PF06259_consen 83 SPGYARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDS--ASDLGV--PPG 158 (177)
T ss_pred CchHHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCC--HHHcCC--CCC
Confidence 344456667777777776653334567899999999999998777665666777776654 332221 111211 236
Q ss_pred CEEEEccCCCCccc
Q 025550 187 PILWSHGMADRTVL 200 (251)
Q Consensus 187 p~l~~~g~~D~~~~ 200 (251)
.++...+.+|.+-.
T Consensus 159 ~v~a~~a~~D~I~~ 172 (177)
T PF06259_consen 159 HVYAMTAPGDPIAY 172 (177)
T ss_pred cEEEeeCCCCCccc
Confidence 68888999887643
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.011 Score=46.78 Aligned_cols=186 Identities=13% Similarity=0.156 Sum_probs=113.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...|+|+++-+.|.............++.|+.++.+-.|-.... |.. .........+.
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~------------~~~----------s~~~~sl~~~~ 94 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVF------------LSA----------SRRILSLSLAS 94 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccc------------ccc----------ccccchhhHHH
Confidence 34466666666555555444577788889999988777643221 100 11112223333
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHH---Hhc--C---CCcceEEEeccCCCC---------------cc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASV---LLY--P---RKLGGGAIFSGWVPF---------------NA 173 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a---~~~--p---~~~~~~i~~~~~~~~---------------~~ 173 (251)
..+..++. ..+.++.++.+--+|+||...+... ... | +...+++..+..... ..
T Consensus 95 ~~l~~L~~---~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~ 171 (350)
T KOG2521|consen 95 TRLSELLS---DYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDD 171 (350)
T ss_pred HHHHHHhh---hccCCcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchh
Confidence 44544444 4557788999999999998766443 222 2 124444443321110 00
Q ss_pred h----------------------------------------hhhhhcccC--CCCCEEEEccCCCCcccchhcccchHHH
Q 025550 174 S----------------------------------------LIDQFTSDA--KKTPILWSHGMADRTVLFEAGQAGPPFL 211 (251)
Q Consensus 174 ~----------------------------------------~~~~~~~~~--~~~p~l~~~g~~D~~~~~~~~~~~~~~l 211 (251)
. +...+.... ...+.+.+.+..|.+++.+..+++.+..
T Consensus 172 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~ 251 (350)
T KOG2521|consen 172 YVARWARLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALR 251 (350)
T ss_pred hHHHHHhcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHH
Confidence 0 000000111 3677888889999999999999999999
Q ss_pred HhcCCeeEEEEeCCCCCCC-----CHHHHHHHHHHHHHhhc
Q 025550 212 EQAGISCEFKAYPGLGHSI-----SNEELRNLESWIKTRMS 247 (251)
Q Consensus 212 ~~~~~~~~~~~~~g~~H~~-----~~~~~~~~~~~l~~~l~ 247 (251)
++.|..++-.-+.+..|.. .........+|++....
T Consensus 252 ~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 252 REKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred HhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 9999998888888887754 34557788888887664
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0027 Score=46.05 Aligned_cols=27 Identities=41% Similarity=0.630 Sum_probs=24.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCCC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPRK 158 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~ 158 (251)
..+.+.++.||.||...+.+..+.|+.
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d 214 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDD 214 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCc
Confidence 567899999999999999999998853
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.002 Score=44.39 Aligned_cols=79 Identities=15% Similarity=0.062 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC------CcceEEEeccCCCCcchhhhhhcccCCCCCEEEE
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR------KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWS 191 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~ 191 (251)
.+.+.+.++.+.. ...++.+.|||+||.+|..++....+ ....++.+++.-.....+....... ....++-+
T Consensus 49 ~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~~~~~~~~~~~~~-~~~~~~~i 126 (140)
T PF01764_consen 49 QILDALKELVEKY-PDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRVGNSAFAKWYDSL-FNRNIFRI 126 (140)
T ss_dssp HHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--BEHHHHHHHHHH-TSCGEEEE
T ss_pred HHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccccCHHHHHHHHhh-CCCeEEEE
Confidence 4444444443222 24799999999999999988776321 2223344444333333333333211 11246666
Q ss_pred ccCCCCc
Q 025550 192 HGMADRT 198 (251)
Q Consensus 192 ~g~~D~~ 198 (251)
.-..|.+
T Consensus 127 v~~~D~V 133 (140)
T PF01764_consen 127 VNQNDIV 133 (140)
T ss_dssp EETTBSG
T ss_pred EECCCEe
Confidence 6667754
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0045 Score=47.93 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.1
Q ss_pred cEEEEEeChhHHHHHHHHHhcCC--CcceEEEecc
Q 025550 135 NVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSG 167 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~ 167 (251)
-+-++|||+||.++-.++.+-|+ .++.+|+++|
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 48899999999999999998876 4899998886
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0073 Score=47.59 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=75.0
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc------------------CCCCc------chhhhhhc------
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG------------------WVPFN------ASLIDQFT------ 180 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~------------------~~~~~------~~~~~~~~------ 180 (251)
+..+...+.|-|--|+.++..|...|+ +.+++.+.- ..+.. +.+.+.+.
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDpr-v~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkq 309 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPR-VFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQ 309 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcc-hhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHH
Confidence 345689999999999999999999984 666654432 11100 00000000
Q ss_pred ---------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHH
Q 025550 181 ---------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLE 239 (251)
Q Consensus 181 ---------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~ 239 (251)
......|-+++.++.|.+..++++.-+++.|.. ...+...|+..|...+..+.+.+
T Consensus 310 L~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG---~kaLrmvPN~~H~~~n~~i~esl 380 (507)
T COG4287 310 LLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPG---EKALRMVPNDPHNLINQFIKESL 380 (507)
T ss_pred HHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCC---ceeeeeCCCCcchhhHHHHHHHH
Confidence 124778999999999999999999999999976 45788899999998876655433
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0054 Score=46.15 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=58.7
Q ss_pred cEEEEEecCCCCCCC--chhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 40 NFILWLHGLGDSGPA--NEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~--~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..+|++||.+.+..+ +..+.+.+.+ -|..++.++.-. | ...+| ...+.+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~----------g-~~~s~---------------l~pl~~Qv 77 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGD----------G-IKDSS---------------LMPLWEQV 77 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecC----------C-cchhh---------------hccHHHHH
Confidence 458889999987766 5556665544 356666666421 1 11222 12233334
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEecc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSG 167 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~ 167 (251)
+.+.+.+.. ..--.+-+.++|.|+||.++-.++..-++ .++..|+++|
T Consensus 78 ~~~ce~v~~---m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~g 126 (296)
T KOG2541|consen 78 DVACEKVKQ---MPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGG 126 (296)
T ss_pred HHHHHHHhc---chhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccC
Confidence 444444431 11124568899999999999877766443 4777787776
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00079 Score=43.74 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=43.9
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH---HH-HHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN---EE-LRNLESWIK 243 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~---~~-~~~~~~~l~ 243 (251)
...|+|++.++.|+.+|.+.++.+.+.|.. .+++..+|.||.... .- .+.+.+||.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 459999999999999999998888888865 388999999998652 22 344556654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=46.96 Aligned_cols=54 Identities=20% Similarity=0.288 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~ 169 (251)
.....+++.+..+++. ..+++.+.|||.||.+|.+++...+ +++..+..+.|..
T Consensus 66 ~~q~~A~~yl~~~~~~------~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 66 PQQKSALAYLKKIAKK------YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHHHHh------CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3445566666665552 1336999999999999999888743 4678888777743
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.014 Score=44.78 Aligned_cols=53 Identities=23% Similarity=0.254 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEecc
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSG 167 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~ 167 (251)
+...++.+.+.+.. ...+ .+-+.++|+|+||.+.-.++.+.|+ .++.+|+++|
T Consensus 61 v~~Qv~~vc~~l~~--~p~L-~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 61 VNDQVEQVCEQLAN--DPEL-ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp HHHHHHHHHHHHHH---GGG-TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred HHHHHHHHHHHHhh--Chhh-hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 34444455554443 1222 1468999999999999999988764 5889999887
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.016 Score=43.66 Aligned_cols=64 Identities=20% Similarity=0.129 Sum_probs=37.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
+..++.+.|||+||.+|..++... +..+.++. +++.......+.... .....-++-+.-.+|.+
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~t-Fg~P~vg~~~~a~~~--~~~~~~~~rvv~~~D~V 194 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYT-FGQPRVGNAAFAEYL--ESTKGRVYRVVHGNDIV 194 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEE-eCCCCCCCHHHHHHh--hccCCCEEEEEECCCcc
Confidence 457899999999999999887753 22344444 444332333332211 12234455566667754
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.023 Score=46.66 Aligned_cols=120 Identities=16% Similarity=0.055 Sum_probs=79.5
Q ss_pred CCCccEEEEEecCCCCCCCchh-----hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSGPANEP-----IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
....|+.+++-|-|.-...|.. +..+.++.|-.++.+..|-.+.+ .+ ..+. ....-..-
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S---------~P----~~~~---st~nlk~L 146 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQS---------SP----IGDL---STSNLKYL 146 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccC---------CC----CCCC---cccchhhh
Confidence 3456888899887765544422 44455566777777777643322 10 0000 00122345
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCC-CCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 111 SLLKAVRNVHAMIDKEV-AAGID-PNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~-~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
...+++.++..+|+.+. +.+.. ..+.+.+|-|+-|.++.++=..+|+.+.|.++-|+.+..
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 56777888888887765 55553 359999999999999999999999999998888886543
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0054 Score=49.91 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=37.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 157 (251)
+.+...+....++..++...+.+ +.++++|++|||||.+..++....++
T Consensus 157 ~~e~rd~yl~kLK~~iE~~~~~~-G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 157 NSEERDQYLSKLKKKIETMYKLN-GGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHc-CCCceEEEecCCccHHHHHHHhcccc
Confidence 44556666777888777654333 34899999999999999999888776
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0052 Score=51.74 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=54.2
Q ss_pred chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCC
Q 025550 55 NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPN 134 (251)
Q Consensus 55 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 134 (251)
|..+++.|...||.. .++.++| ++|-- .....+........|+..|+...+.+ ..+
T Consensus 158 w~kLIe~L~~iGY~~--~nL~gAP------------YDWRl---------s~~~le~rd~YF~rLK~lIE~ay~~n-ggk 213 (642)
T PLN02517 158 WAVLIANLARIGYEE--KNMYMAA------------YDWRL---------SFQNTEVRDQTLSRLKSNIELMVATN-GGK 213 (642)
T ss_pred HHHHHHHHHHcCCCC--Cceeecc------------ccccc---------CccchhhhhHHHHHHHHHHHHHHHHc-CCC
Confidence 366888888888863 3333221 23310 01122333445566777777654322 257
Q ss_pred cEEEEEeChhHHHHHHHHHhcC---------------CCcceEEEeccC
Q 025550 135 NVFVCGFSQGGALTLASVLLYP---------------RKLGGGAIFSGW 168 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~~p---------------~~~~~~i~~~~~ 168 (251)
+++|+||||||.+++.+..... ..|++.|.++|.
T Consensus 214 KVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 214 KVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred eEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 9999999999999998765321 126777877773
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.021 Score=46.38 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcC-------C-CcceEEEeccCCCCcchhhhhhcccCCC
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYP-------R-KLGGGAIFSGWVPFNASLIDQFTSDAKK 185 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-------~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 185 (251)
+.+.+...++.++ ++.-..-+|.+.|||+||.+|..+|.... . .+.. +.+++.---...+.+.+... ..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~-~TFGsPRVGN~~Fa~~~~~~-~~ 285 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTA-IVFGSPQVGNKEFNDRFKEH-PN 285 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEE-EEeCCCcccCHHHHHHHHhC-CC
Confidence 3444445555444 22211125999999999999998885421 1 2333 44444333333443333221 13
Q ss_pred CCEEEEccCCCCc
Q 025550 186 TPILWSHGMADRT 198 (251)
Q Consensus 186 ~p~l~~~g~~D~~ 198 (251)
..++-+.-..|.+
T Consensus 286 ~rvlrVvN~~DiV 298 (414)
T PLN02454 286 LKILHVRNTIDLI 298 (414)
T ss_pred ceEEEEecCCCee
Confidence 4455555666754
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0065 Score=43.82 Aligned_cols=116 Identities=13% Similarity=0.118 Sum_probs=67.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--c----CCCcceEEEeccCCCCcchhhhhhccc
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--Y----PRKLGGGAIFSGWVPFNASLIDQFTSD 182 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~----p~~~~~~i~~~~~~~~~~~~~~~~~~~ 182 (251)
..+..+.+..+...+...... .+..+++|+|+|+|+.++..++.. . .+++.++++++-........ .. ..
T Consensus 57 ~~S~~~G~~~~~~~i~~~~~~-CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~--~~-~~ 132 (179)
T PF01083_consen 57 GDSVAAGVANLVRLIEEYAAR-CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQP--GI-PG 132 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTT--TB-TC
T ss_pred cccHHHHHHHHHHHHHHHHHh-CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCcc--cc-Cc
Confidence 355666677777777765433 245799999999999999988877 2 24578888776543321111 11 11
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhhc
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTRMS 247 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~ 247 (251)
...-.++-++-..|.+.... ...+ ..|.-. .+..++..+|+.+.|+
T Consensus 133 ~~~~~~~~~C~~gD~vC~~~-~~~~------------------~~H~~Y~~~~~~~aa~fv~~~l~ 179 (179)
T PF01083_consen 133 DYSDRVRSYCNPGDPVCDAS-GGSL------------------AAHLSYFNDYGDEAAQFVVSRLQ 179 (179)
T ss_dssp SCGGGEEEE-BTT-GGGGTS-SSSC------------------HHHGSHHHHHHHHHHHHHHHHH-
T ss_pred ccccceeEEcCCCCcccCCC-CCCc------------------hhhhCcccccHHHHHHHHHHhcC
Confidence 12345888888888876411 1111 125432 3347778888887763
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.017 Score=46.14 Aligned_cols=62 Identities=21% Similarity=0.122 Sum_probs=35.3
Q ss_pred CcEEEEEeChhHHHHHHHHHhcCCC-----cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 134 NNVFVCGFSQGGALTLASVLLYPRK-----LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~p~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
.+|.+.|||+||.+|..+|...... .-.++.+++.---...+.+.+.. ....++=+.-..|.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~--~~~~~lRVvN~~D~ 266 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEK--QGTKVLRIVNSDDV 266 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHh--cCCcEEEEEeCCCC
Confidence 4699999999999999887653211 12245555433334444444422 23445555555564
|
|
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.15 Score=38.73 Aligned_cols=28 Identities=21% Similarity=0.232 Sum_probs=23.0
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYPRKL 159 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p~~~ 159 (251)
.-.+..|+|-||||.++......++..+
T Consensus 193 g~g~~~~~g~Smgg~~a~~vgS~~q~Pv 220 (371)
T KOG1551|consen 193 GLGNLNLVGRSMGGDIANQVGSLHQKPV 220 (371)
T ss_pred CcccceeeeeecccHHHHhhcccCCCCc
Confidence 3468999999999999999888766543
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.011 Score=34.35 Aligned_cols=50 Identities=20% Similarity=0.160 Sum_probs=29.2
Q ss_pred ceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCch
Q 025550 6 PIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANE 56 (251)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~ 56 (251)
|.....+...|+-.+..+.++.+.. ..+...++|+|++.||..+++..|.
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~-~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKN-SSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTT-CTTTTTT--EEEEE--TT--GGGGC
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCC-CcccCCCCCcEEEECCcccChHHHH
Confidence 4456677788888888888876542 2245678899999999998887763
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.039 Score=45.50 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=42.2
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc-----------------C-----CeeEEEEeCCCCCCCCHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA-----------------G-----ISCEFKAYPGLGHSISNEELRNLESW 241 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-----------------~-----~~~~~~~~~g~~H~~~~~~~~~~~~~ 241 (251)
...+||+.+|..|.+++....+.+.+.|.=. | ...++..+.++||....+.++...+.
T Consensus 329 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 329 NGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp TT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred ccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 4499999999999999865544444433211 0 13668889999999988888888888
Q ss_pred HHHhhc
Q 025550 242 IKTRMS 247 (251)
Q Consensus 242 l~~~l~ 247 (251)
|+++++
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 888775
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.028 Score=46.61 Aligned_cols=63 Identities=24% Similarity=0.184 Sum_probs=35.6
Q ss_pred CcEEEEEeChhHHHHHHHHHhc----CCC-cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 134 NNVFVCGFSQGGALTLASVLLY----PRK-LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~----p~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.+|.+.|||+||.+|..+|... +.. ...++.+++.--....+.+.+. .....++=+.-..|.+
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVGN~aFA~~~~--~~~~~~~RVVN~~DiV 397 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVGNRAFADRLN--ARGVKVLRVVNAQDVV 397 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcccHHHHHHHH--hcCCcEEEEecCCCee
Confidence 4799999999999999877643 221 1124445543333344444442 1234455555566643
|
|
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.047 Score=43.45 Aligned_cols=69 Identities=12% Similarity=0.096 Sum_probs=49.7
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCC-----cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCccc
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRK-----LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
....+|.|+|||+|+.+.+.+.....++ +..++++++..+.......... ......+.-++.++|.+..
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r-~vVsGr~vN~YS~~D~vL~ 290 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIR-SVVSGRLVNVYSENDWVLG 290 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHH-HHccCeEEEEecCcHHHHH
Confidence 3555799999999999998777654433 6788888887766544333322 3367889999999998744
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.016 Score=47.06 Aligned_cols=20 Identities=30% Similarity=0.566 Sum_probs=18.0
Q ss_pred cEEEEEeChhHHHHHHHHHh
Q 025550 135 NVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 135 ~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+|.+.|||+||.+|...|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 69999999999999988764
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.076 Score=43.72 Aligned_cols=22 Identities=27% Similarity=0.270 Sum_probs=18.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+..++.+.|||+||.+|..++.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 3568999999999999988754
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.078 Score=43.11 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 025550 134 NNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
-+|.+.|||+||.+|...|..
T Consensus 215 ~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999988754
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.048 Score=40.00 Aligned_cols=44 Identities=23% Similarity=0.126 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
..-+..++.+..+..++..-+..+++|+|||+|+.+...+...+
T Consensus 73 ~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 73 FDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 33334444444444332222457899999999999999988764
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.1 Score=42.35 Aligned_cols=63 Identities=21% Similarity=0.158 Sum_probs=36.2
Q ss_pred CcEEEEEeChhHHHHHHHHHh----cCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 134 NNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.+|.+.|||+||.+|...|.. .+.....++.+++.--....+.+.+.. ....++=+.-..|.+
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~--~~~~~~RVvn~~DiV 275 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNE--LGVKTLRVVVKQDKV 275 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHh--cCCCEEEEEECCCcc
Confidence 479999999999999987754 233223355555533333333333322 234455555566644
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.018 Score=46.27 Aligned_cols=57 Identities=21% Similarity=0.200 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 111 SLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
..++++++...++..+. ..+....+|+.+|-|+||+++.++=++||..+.|.++-|.
T Consensus 143 tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 143 TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 34555566656665554 3344567899999999999999999999987776655444
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.12 Score=42.63 Aligned_cols=67 Identities=15% Similarity=0.036 Sum_probs=38.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHHh----c----CCCcceEEEeccCCCCcchhhhhhccc--CCCCCEEEEccCCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLL----Y----PRKLGGGAIFSGWVPFNASLIDQFTSD--AKKTPILWSHGMADRT 198 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~----~----p~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~p~l~~~g~~D~~ 198 (251)
+..++.+.|||+||.+|..++.. . ..++..+..+++.--....+...+... ....+.+=+.-.+|.+
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~~FA~~~~~~l~~~~~~~~RvVn~~DiV 358 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDEDFGIFMKDKLKEFDVKYERYVYCNDMV 358 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccHHHHHHHHhhhcccCcceEEEEECCCcc
Confidence 45689999999999999987742 1 123445666665433333333333221 1234455555666754
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.066 Score=44.65 Aligned_cols=63 Identities=19% Similarity=0.130 Sum_probs=37.1
Q ss_pred CcEEEEEeChhHHHHHHHHHh----cCCC-cceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 134 NNVFVCGFSQGGALTLASVLL----YPRK-LGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~----~p~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
.+|.|.|||+||.+|...|.. .|.. ...++.+++.--....+...+.. ....++=+.-..|.+
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~--l~~~~lRVVN~~DiV 385 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNE--LGVKVLRVVNKQDIV 385 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHh--cCCCEEEEEECCCcc
Confidence 479999999999999988754 2322 12344454433333333333322 245667666677754
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.16 Score=42.12 Aligned_cols=59 Identities=22% Similarity=0.136 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----c------CCCcceEEEeccCCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----Y------PRKLGGGAIFSGWVP 170 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p~~~~~~i~~~~~~~ 170 (251)
.+..+....|..+++. -......++.|+|-|+||..+..+|.. + +-.++++++.+|+.+
T Consensus 145 ~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 145 SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 3344444555544432 122344689999999999977766643 1 113788888888664
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.11 Score=42.80 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=64.4
Q ss_pred cEEEEEecCCC-CCCCchhh--hhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 40 NFILWLHGLGD-SGPANEPI--KTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 40 ~~vv~~HG~~~-~~~~~~~~--~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
-++|++-|+|- ++..-..+ .+.|+. ....++.+.||..+- |.- .+.. .....+....-|-.-+
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~F-------GFL---~l~~---~~eaPGNmGl~DQqLA 202 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAF-------GFL---YLPG---HPEAPGNMGLLDQQLA 202 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccc-------eEE---ecCC---CCCCCCccchHHHHHH
Confidence 38889999773 22222222 223333 344556677764422 100 0000 0012234455666777
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEeccCC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSGWV 169 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~~~ 169 (251)
+.++++.|. ..+-++++|.|+|-|.|+.-+..-...-+ ..++.+|+-||.+
T Consensus 203 l~WV~~Ni~---aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 203 LQWVQENIA---AFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHHhHH---HhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 888888777 67889999999999999876543322221 2366667777644
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.16 Score=42.18 Aligned_cols=63 Identities=22% Similarity=0.093 Sum_probs=39.9
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----C-eeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----I-SCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~-~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..+||+..|+.|.+++.-..+.+.+.|+=. | . ..++..+.++||... ..++...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 468888888888888876655555554311 1 1 256677778888774 35666666666
Q ss_pred HhhcC
Q 025550 244 TRMSC 248 (251)
Q Consensus 244 ~~l~~ 248 (251)
+++..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 66543
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.055 Score=45.14 Aligned_cols=22 Identities=36% Similarity=0.428 Sum_probs=19.0
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 025550 133 PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
..+|.+.|||+||.+|..+|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4589999999999999988753
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.056 Score=44.93 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
.+...++.+++.. +..++.+.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 3444444443222 4468999999999999998864
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.066 Score=44.67 Aligned_cols=20 Identities=35% Similarity=0.471 Sum_probs=17.9
Q ss_pred CcEEEEEeChhHHHHHHHHH
Q 025550 134 NNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~ 153 (251)
-+|.+.|||+||.+|...|.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 47999999999999998775
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.28 Score=36.79 Aligned_cols=43 Identities=26% Similarity=0.369 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+++.+.++.+.+.+.... -..++++++|+|+|+.++...+.+
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~---~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAI---AAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred chHHHHHHHHHHHHHHhhc---cCCCCEEEEEECHHHHHHHHHHHH
Confidence 4667777777777776421 156789999999999999877655
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.26 Score=40.90 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWV 169 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~ 169 (251)
.|+....+.+.+.+.+. .-...+..|+|-|+||.-+..+|..--+ ..++++.+++.+
T Consensus 177 ~D~~~~~~~f~~~fp~~---~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 177 KDVYSFLRLFFDKFPHY---ARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hhHHHHHHHHHHHHHHH---hhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 44444444444444432 2223588999999999988877755332 355555555544
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.099 Score=38.64 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=26.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 133 PNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
.++|.|+++|||-.+|..+....| ++..++++|..
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTP 90 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCC
Confidence 468999999999999887754433 56667777733
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.091 Score=43.78 Aligned_cols=21 Identities=38% Similarity=0.444 Sum_probs=18.4
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 025550 134 NNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+|.+.|||+||.+|..+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999987753
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.17 Score=43.03 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=19.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHh
Q 025550 132 DPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.-++.++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 44589999999999999877654
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.29 Score=37.61 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+..+|.+.|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 5579999999999999998887764
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.29 Score=37.61 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
+..+|.+.|||+||.+|..+..++.
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC
Confidence 5579999999999999998887764
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.05 E-value=0.91 Score=42.17 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=63.0
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.....|.++|+|-.-+.......++..+. +..+.+-+- .......++.
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle---~PaYglQ~T-----------------------------~~vP~dSies 2166 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLE---IPAYGLQCT-----------------------------EAVPLDSIES 2166 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcC---Ccchhhhcc-----------------------------ccCCcchHHH
Confidence 45667899999998777767777666543 333332221 1223455666
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~ 167 (251)
..+...+.+++++ +..+.-++|+|+|+.++..+|.... +....+|++.|
T Consensus 2167 ~A~~yirqirkvQ----P~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2167 LAAYYIRQIRKVQ----PEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred HHHHHHHHHHhcC----CCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 6666666555332 4568899999999999998886532 33556787776
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.97 E-value=3.4 Score=34.57 Aligned_cols=63 Identities=19% Similarity=0.131 Sum_probs=42.7
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCC---------------------eeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGI---------------------SCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
.++++..|+.|.++|....+.+.+.|.-... ...+..+.|+||....+..+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999999999998777666555542110 1456778899998775555555555555
Q ss_pred hhcC
Q 025550 245 RMSC 248 (251)
Q Consensus 245 ~l~~ 248 (251)
++..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 5543
|
|
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.64 E-value=0.59 Score=37.48 Aligned_cols=22 Identities=36% Similarity=0.507 Sum_probs=19.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 025550 133 PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.-+|.+.|||+||.+|..+|..
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHH
Confidence 5589999999999999987764
|
|
| >PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function | Back alignment and domain information |
|---|
Probab=90.49 E-value=6.5 Score=30.67 Aligned_cols=24 Identities=21% Similarity=0.355 Sum_probs=20.0
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
-+.++|.++|+|-|++.|-.++..
T Consensus 89 ~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 89 EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred CCcceEEEEecCccHHHHHHHHHH
Confidence 356789999999999999877754
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=89.71 E-value=0.35 Score=34.99 Aligned_cols=61 Identities=18% Similarity=0.236 Sum_probs=41.4
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCC-eeEEEEeCCCCCC--CC-----HHHHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHS--IS-----NEELRNLESWIKT 244 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~--~~-----~~~~~~~~~~l~~ 244 (251)
.+++++-+-|++|.+....++.+..+.+..... ....++.+|+||. |. .+....+.+||.+
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 568899999999999998887665555544322 2566778999994 22 2334556666654
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins | Back alignment and domain information |
|---|
Probab=89.11 E-value=2 Score=28.88 Aligned_cols=27 Identities=19% Similarity=0.247 Sum_probs=22.2
Q ss_pred CCCCccEEEEEecCCCCCCCchh--hhhh
Q 025550 35 NPMARNFILWLHGLGDSGPANEP--IKTL 61 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~--~~~~ 61 (251)
.++++|+|+-+||+.+++.+|.. +++.
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~~liA~~ 76 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVSRLIAEH 76 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHHHHHHHH
Confidence 46788999999999999999866 5554
|
Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins ( |
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=1 Score=37.89 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHH-H-cCCCCCcEEEEEeChhHHHHHHHHHhc----C------CCcceEEEeccCC
Q 025550 114 KAVRNVHAMIDKEV-A-AGIDPNNVFVCGFSQGGALTLASVLLY----P------RKLGGGAIFSGWV 169 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p------~~~~~~i~~~~~~ 169 (251)
+.++++..+++... + ......++.|+|+|+||..+..+|.+- . -.++++++-.|+.
T Consensus 149 ~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 149 EVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 33444444444333 1 123457899999999999998777652 1 1367877776644
|
|
| >COG3673 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.06 E-value=6 Score=31.31 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=18.8
Q ss_pred CCCcEEEEEeChhHHHHHHHHH
Q 025550 132 DPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
+.++|.++|+|-|+.++--+|.
T Consensus 120 pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 120 PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred CCCeEEEeeccchhHHHHHHHH
Confidence 5689999999999999876664
|
|
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.7 Score=28.67 Aligned_cols=37 Identities=14% Similarity=-0.083 Sum_probs=18.8
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP 57 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~ 57 (251)
.-++..++..... ..+++...||++||+.++-..|..
T Consensus 74 ~I~g~~iHFih~r-------s~~~~aiPLll~HGWPgSf~Ef~~ 110 (112)
T PF06441_consen 74 EIDGLDIHFIHVR-------SKRPNAIPLLLLHGWPGSFLEFLK 110 (112)
T ss_dssp EETTEEEEEEEE---------S-TT-EEEEEE--SS--GGGGHH
T ss_pred EEeeEEEEEEEee-------CCCCCCeEEEEECCCCccHHhHHh
Confidence 3356666664444 244556689999999987655544
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.14 E-value=2.8 Score=35.95 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=23.7
Q ss_pred HHHHHHHHcCCC-CCcEEEEEeChhHHHHHHHHHh
Q 025550 121 AMIDKEVAAGID-PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 121 ~~i~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+++.+.+.++. ..+|+.+||||||.++=.+...
T Consensus 512 ~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 512 ELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 344444356664 6789999999999988665543
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.67 E-value=1.3 Score=36.92 Aligned_cols=60 Identities=20% Similarity=0.203 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cC------CCcceEEEeccCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YP------RKLGGGAIFSGWV 169 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p------~~~~~~i~~~~~~ 169 (251)
+.....+....|..++++ -.......+.|.|-|++|..+-.+|.. +. --++|+++-.|.+
T Consensus 144 D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 144 DDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLT 213 (454)
T ss_pred cHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCccc
Confidence 444555556666666653 233456789999999999888777653 21 1377887766644
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=84.72 E-value=2.4 Score=34.64 Aligned_cols=110 Identities=16% Similarity=0.198 Sum_probs=68.8
Q ss_pred CCCccEEEEEecCCCCCC-CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGP-ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+..+|+|+.--|++.... ........+..+. +.+.++-- +.|.++- .+...-++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld~NQ---l~vEhRfF---------~~SrP~p-----------~DW~~Lti~Q 116 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLDGNQ---LSVEHRFF---------GPSRPEP-----------ADWSYLTIWQ 116 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhccce---EEEEEeec---------cCCCCCC-----------CCcccccHhH
Confidence 345788988889886432 2233555554332 33444311 2111111 1224456777
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
++.+...+++.+.. +=+++.+-.|-|=||+.+++.=.-+|+.+.+.|......+
T Consensus 117 AA~D~Hri~~A~K~--iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 117 AASDQHRIVQAFKP--IYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred hhHHHHHHHHHHHh--hccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 77777777776531 2256899999999999998877779999999998776544
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=84.26 E-value=18 Score=28.38 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=41.9
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCC-eeEEEEeCCCCCC--C-----CHHHHHHHHHHHHHhhcC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI-SCEFKAYPGLGHS--I-----SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~--~-----~~~~~~~~~~~l~~~l~~ 248 (251)
.++-++-+-|++|.+--..+.++..+.+..--. ..+...-+++||. | ..+....+.+|+.++-+.
T Consensus 338 ~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 338 TNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred eceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 567788899999998777666544443332111 1445667899994 2 234467788888877543
|
|
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=83.86 E-value=2.4 Score=35.43 Aligned_cols=64 Identities=23% Similarity=0.148 Sum_probs=46.7
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----Ce-eEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----IS-CEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..++++..|+.|.+++....+.+.+.|+=. | .. .++..+.|+||... ..++...+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 579999999999999987666666666411 1 12 67778889999884 56777777777
Q ss_pred HhhcCC
Q 025550 244 TRMSCS 249 (251)
Q Consensus 244 ~~l~~~ 249 (251)
+++...
T Consensus 430 ~fi~~~ 435 (437)
T PLN02209 430 RWISGQ 435 (437)
T ss_pred HHHcCC
Confidence 776543
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=83.58 E-value=2.3 Score=33.87 Aligned_cols=64 Identities=22% Similarity=0.093 Sum_probs=46.0
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----C-eeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----I-SCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~-~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
..+||+..|+.|.+++.-..+.+.+.|+=. | . ..++..+.|+||... ..++...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 589999999999999876666666655411 1 1 267777889999885 46777777777
Q ss_pred HhhcCC
Q 025550 244 TRMSCS 249 (251)
Q Consensus 244 ~~l~~~ 249 (251)
+++..+
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 777643
|
|
| >cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source | Back alignment and domain information |
|---|
Probab=83.51 E-value=27 Score=29.77 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCCCcchhhhhhcccCCCC
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVPFNASLIDQFTSDAKKT 186 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 186 (251)
.+.+.+..+....+.+.+...+.-+-+|+..|.---.--+..+..+. .+.+.+++.....+.....+.+.. ...++
T Consensus 15 ~~~l~~~~~~~~~i~~~l~~~~~~~~~v~~~~~v~~~~~i~~~~~~~~~~~~~dgvi~~m~TFs~a~~~i~~~--~~l~~ 92 (484)
T cd03557 15 EEALKQVAAHSREIVDGLNASGKLPVKIVFKPVLTTPDEILAVCREANADDNCAGVITWMHTFSPAKMWIAGL--TALQK 92 (484)
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCCeEEEEccccCCHHHHHHHHHHccccCCccEEEEccCCCchHHHHHHHH--HHcCC
Confidence 34445555555555554322221234666666555444444444443 256999998888777666555543 45789
Q ss_pred CEEEEccCCCCcccchh--------------cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 187 PILWSHGMADRTVLFEA--------------GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 187 p~l~~~g~~D~~~~~~~--------------~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
|+++++--.-..+|.+. ..++...+++.|++.+++. ||.-..+..+++.+|++-.
T Consensus 93 PvL~~~~q~~~~l~~~sidmd~m~l~qaahG~~e~~~il~R~gi~~~~v~----G~~~d~~~~~~i~~w~raa 161 (484)
T cd03557 93 PLLHLHTQFNREIPWDTIDMDFMNLNQSAHGDREFGFIGSRMRIPRKVVV----GHWQDPEVHEKIGDWMRAA 161 (484)
T ss_pred CEEEEccCCCccCCCCCccchHHhhhhhcCCcHHHHHHHHHcCCCeeEEE----EeCCCHHHHHHHHHHHHHH
Confidence 99998876533333222 1233446777888877664 7887777788888888643
|
AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute. |
| >KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.11 E-value=25 Score=29.04 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHH--HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 116 VRNVHAMIDKEV--AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 116 ~~~l~~~i~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
-+.+.+.+.... ....|++++++.+.+-++.-+++..+..|. .+-+| =.|+.+....-.. +...-.-+|+....
T Consensus 127 rqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpg-dafLv-PtPyY~gfdrdl~-~rTgveivpv~c~S- 202 (471)
T KOG0256|consen 127 RQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPG-DAFLV-PTPYYPGFDRDLR-WRTGVEIVPVHCSS- 202 (471)
T ss_pred HHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCC-ceeee-cCCCCCcccccce-eccCceEEEEEeec-
Confidence 333444444433 334589999999999999988888888874 22233 3333332211111 11111112333222
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCC----CCCCCCHHHHHHHHHHHHH
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPG----LGHSISNEELRNLESWIKT 244 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 244 (251)
++-..+..+.-+..++..++.+.+++-+++.+ .|-.+..+....+.+|..+
T Consensus 203 s~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~ 257 (471)
T KOG0256|consen 203 SNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASR 257 (471)
T ss_pred CCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhh
Confidence 22233445555556666667788888877765 2334568888999998865
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=82.90 E-value=0.75 Score=37.97 Aligned_cols=59 Identities=22% Similarity=0.292 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHH-H-cCCCCCcEEEEEeChhHHHHHHHHHh----c------CCCcceEEEeccCCC
Q 025550 112 LLKAVRNVHAMIDKEV-A-AGIDPNNVFVCGFSQGGALTLASVLL----Y------PRKLGGGAIFSGWVP 170 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~-~-~~~~~~~i~l~G~S~Gg~~a~~~a~~----~------p~~~~~~i~~~~~~~ 170 (251)
..++++++..++.... + ......++.|+|-|+||..+..+|.. . +-.++++++.+|++.
T Consensus 112 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 112 DDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred hhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 3444555555554443 2 22345689999999999988777653 2 223889999888665
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=82.31 E-value=2.7 Score=34.11 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCC-CCCcEEEEEeChhHHHHHHHH
Q 025550 119 VHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASV 152 (251)
Q Consensus 119 l~~~i~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a 152 (251)
++++++.+...++ +.++|+|.|.|.||..++..+
T Consensus 140 ~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 140 LRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 3344444433333 578999999999999887654
|
|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.12 E-value=16 Score=26.47 Aligned_cols=38 Identities=13% Similarity=0.364 Sum_probs=31.1
Q ss_pred CCCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEE
Q 025550 36 PMARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWS 73 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~ 73 (251)
...++.+||+-|.++++..-.. +.+.|.+.|+.++.+|
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 3566899999999998877544 5668888999999998
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 251 | ||||
| 3cn7_A | 226 | Crystal Structure Analysis Of The Carboxylesterase | 2e-26 | ||
| 1fj2_A | 232 | Crystal Structure Of The Human Acyl Protein Thioest | 8e-25 | ||
| 4f21_A | 246 | Crystal Structure Of CarboxylesterasePHOSPHOLIPASE | 3e-24 | ||
| 1auo_A | 218 | Carboxylesterase From Pseudomonas Fluorescens Lengt | 1e-21 | ||
| 3u0v_A | 239 | Crystal Structure Analysis Of Human Lyplal1 Length | 1e-16 | ||
| 4h0c_A | 210 | Crystal Structure Of PhospholipaseCARBOXYLESTERASE | 2e-10 | ||
| 4ftw_A | 285 | Crystal Structure Of A Carboxyl Esterase N110cL145H | 3e-08 | ||
| 4fhz_A | 285 | Crystal Structure Of A Carboxyl Esterase At 2.0 Ang | 1e-07 | ||
| 2ecf_A | 741 | Crystal Structure Of Dipeptidyl Aminopeptidase Iv F | 7e-04 |
| >pdb|3CN7|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859 From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal Form Length = 226 | Back alignment and structure |
|
| >pdb|1FJ2|A Chain A, Crystal Structure Of The Human Acyl Protein Thioesterase 1 At 1.5 A Resolution Length = 232 | Back alignment and structure |
|
| >pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY PROTEIN From Francisella Tularensis Length = 246 | Back alignment and structure |
|
| >pdb|1AUO|A Chain A, Carboxylesterase From Pseudomonas Fluorescens Length = 218 | Back alignment and structure |
|
| >pdb|3U0V|A Chain A, Crystal Structure Analysis Of Human Lyplal1 Length = 239 | Back alignment and structure |
|
| >pdb|4H0C|A Chain A, Crystal Structure Of PhospholipaseCARBOXYLESTERASE FROM DYADOBACTER Fermentans Dsm 18053 Length = 210 | Back alignment and structure |
|
| >pdb|4FTW|A Chain A, Crystal Structure Of A Carboxyl Esterase N110cL145H AT 2.3 ANGSTROM Resolution Length = 285 | Back alignment and structure |
|
| >pdb|4FHZ|A Chain A, Crystal Structure Of A Carboxyl Esterase At 2.0 Angstrom Resolution Length = 285 | Back alignment and structure |
|
| >pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From Stenotrophomonas Maltophilia Length = 741 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 2e-67
Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKL--TKWSFPSAPNNPVTCNYGAVMPSWFD 95
+++LHG GDSG + + K +P+AP T G + WFD
Sbjct: 22 HSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFD 81
Query: 96 IHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155
+I T P+ S+ + + +ID+EV +GI N + + GFS GG + +
Sbjct: 82 RFKI--TNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRN 139
Query: 156 PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQA 214
+ + G S ++ +++ P + HG AD VL + L+
Sbjct: 140 HQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSL 199
Query: 215 GISCEFKAYPGLGHSISNEELRNLESWIKTR 245
G++ +F ++P + H +S EL L+ WI T+
Sbjct: 200 GVTTKFHSFPNVYHELSKTELDILKLWILTK 230
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 Length = 232 | Back alignment and structure |
|---|
Score = 205 bits (522), Expect = 2e-66
Identities = 73/211 (34%), Positives = 102/211 (48%), Gaps = 8/211 (3%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
A +++LHGLGD+G F K+ P AP PVT N MPSWFDI
Sbjct: 22 ATAAVIFLHGLGDTGHG---WAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDII 78
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157
+ + S +DES + +A N+ A+ID+EV GI N + + GFSQGGAL+L + L +
Sbjct: 79 GL--SPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQ 136
Query: 158 KLGGGAIFSGWVPFNASLIDQFTSDA-KKTPILWSHGMADRTVLFEAGQAGPPFLEQA-- 214
KL G S W+P AS A + IL HG D V G L+
Sbjct: 137 KLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVN 196
Query: 215 GISCEFKAYPGLGHSISNEELRNLESWIKTR 245
+ FK Y G+ HS +E+ +++ +I
Sbjct: 197 PANVTFKTYEGMMHSSCQQEMMDVKQFIDKL 227
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* Length = 226 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 2e-66
Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 7/222 (3%)
Query: 26 PSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN 85
SS P A I+WLHGLG +P+ T++ P AP+ VT N
Sbjct: 11 GSSEPLILDAPNADACIIWLHGLGADRTDFKPVAEAL-QMVLPSTRFILPQAPSQAVTVN 69
Query: 86 YGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGG 145
G VMPSW+DI + + DE L + V A+ID++ A GI + + GFSQGG
Sbjct: 70 GGWVMPSWYDILAF--SPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGG 127
Query: 146 ALTLASVLL-YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAG 204
A+ L + Y + LGG S + P L K+ P+L HG D V G
Sbjct: 128 AVVLHTAFRRYAQPLGGVLALSTYAPTFDDLALD--ERHKRIPVLHLHGSQDDVVDPALG 185
Query: 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246
+A L+ G+ + YP +GH +S EE+ ++ +W++ R+
Sbjct: 186 RAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL 226
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* Length = 218 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 1e-65
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
A ++WLHGLG P+ T++ P AP PVT N G MPSW+DI
Sbjct: 13 ADACVIWLHGLGADRYDFMPVAEAL-QESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIK 71
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YP 156
+ + + L + + V +I+ + GID + +F+ GFSQGGA+ + + +
Sbjct: 72 AM--SPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQ 129
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216
LGG S + P ++ ++ ++ P L HG D V G++ L+ G+
Sbjct: 130 GPLGGVIALSTYAPTFGDELEL-SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGV 188
Query: 217 SCEFKAYPGLGHSISNEELRNLESWIKTR 245
+ ++ YP +GH + +E+ ++ +W+ R
Sbjct: 189 TVTWQEYP-MGHEVLPQEIHDIGAWLAAR 216
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} Length = 209 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 9e-41
Identities = 32/215 (14%), Positives = 62/215 (28%), Gaps = 16/215 (7%)
Query: 30 YSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89
Y + +L LH G I + +P + + +
Sbjct: 7 YVFKAGRKDLAPLLLLHSTGGDEHQLVEIAEMI-APSHPIL------SIRGRINEQG--- 56
Query: 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALT 148
+ +F + + D SL + + + +D + + G+S G +
Sbjct: 57 VNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVA 116
Query: 149 LASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGP 208
L L F G + + T + S+ D V +
Sbjct: 117 LNMFLRGKINFDKIIAFHGMQLED----FEQTVQLDDKHVFLSYAPNDMIVPQKNFGDLK 172
Query: 209 PFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243
LE +G E GH ++ EE+ + W+
Sbjct: 173 GDLEDSGCQLEIYESSL-GHQLTQEEVLAAKKWLT 206
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-39
Identities = 37/221 (16%), Positives = 66/221 (29%), Gaps = 23/221 (10%)
Query: 29 SYSHEQNPMARNF--ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY 86
SY H+ + LHG G P+ + +P V+ +
Sbjct: 50 SYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARL-LPQATIL------SPVGDVSEHG 102
Query: 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGA 146
+F V D L +A + I V GFS G
Sbjct: 103 ---AARFFRRTGEGVY-----DMVDLERATGKMADFIK-ANREHYQAGPVIGLGFSNGAN 153
Query: 147 LTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQA 206
+ ++ P + +PF + + +L + G D + +A
Sbjct: 154 ILANVLIEQPELFDAAVLMHPLIPFE----PKISPAKPTRRVLITAGERDPICPVQLTKA 209
Query: 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247
L+ G + E +PG GH I + E+ + ++
Sbjct: 210 LEESLKAQGGTVETVWHPG-GHEIRSGEIDAVRGFLAAYGG 249
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 Length = 226 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-37
Identities = 36/209 (17%), Positives = 68/209 (32%), Gaps = 21/209 (10%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
++ +L LHG G + P+ + E + + V N MP +F
Sbjct: 37 SKPVLLLLHGTGGNELDLLPLAEIV-DSEASVL------SVRGNVLENG---MPRFFRRL 86
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYP 156
+ DE L+ + ++ +D+ D NN+ G+S G + + + Y
Sbjct: 87 AEGIF-----DEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYE 141
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216
L G + VP ++ + + G D + LE A
Sbjct: 142 NALKGAVLHHPMVPRR----GMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANA 197
Query: 217 SCEFKAYPGLGHSISNEELRNLESWIKTR 245
+ GH ++ E+ + W
Sbjct: 198 NVTMHWENR-GHQLTMGEVEKAKEWYDKA 225
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 Length = 223 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-37
Identities = 36/215 (16%), Positives = 71/215 (33%), Gaps = 22/215 (10%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
+R + LHG G P+ +P L A + WF+
Sbjct: 29 SRECLFLLHGSGVDETTLVPLARRI-APTATLV------AARGRIPQED---GFRWFERI 78
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYP 156
+ ++ S+L A ++ G++ ++ G+S G L + +LL+P
Sbjct: 79 DPTRF-----EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHP 133
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216
+ A+ + +D L G AD A L + G
Sbjct: 134 GIVRLAALLRPMPVLD----HVPATDLAGIRTLIIAGAAD-ETYGPFVPALVTLLSRHGA 188
Query: 217 SCEFKAYPGLGHSISNEELRNLESWIKTRMSCSSS 251
+ + P GH I + + + W+ ++ + +
Sbjct: 189 EVDARIIPS-GHDIGDPDAAIVRQWLAGPIAIAQA 222
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 82.1 bits (202), Expect = 3e-18
Identities = 39/210 (18%), Positives = 68/210 (32%), Gaps = 28/210 (13%)
Query: 42 ILWLHGLGDSGPANE------PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFD 95
+++LHG G+ G N ++ P +++ F AP P ++ +
Sbjct: 177 VVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTD--- 233
Query: 96 IHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLL 154
++ + K + V +I K + ID N +++ G S GG T +++
Sbjct: 234 ----------RENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIME 283
Query: 155 YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214
+P G K PI H D V E + L +
Sbjct: 284 FPELFAAAIPICGGGDV------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEI 337
Query: 215 GISCEFKAYPGLGHSISNEELRNLESWIKT 244
G + Y + SWI T
Sbjct: 338 GGKVRYTEYEKGFMEKHGWDPHG--SWIPT 365
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Length = 276 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 2e-10
Identities = 25/143 (17%), Positives = 41/143 (28%), Gaps = 31/143 (21%)
Query: 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTL------------ASVLLYP--- 156
+ +H + I+P VF+ G S GG L +L YP
Sbjct: 100 VQAVFSLIHQNHKEW---QINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTS 156
Query: 157 -----RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPF- 210
F ++ ++ TS T +W H D V +
Sbjct: 157 FTFGWPSDLSHFNFEIENISEYNISEKVTSSTPPT-FIW-HTADDEGVPIYNSLK---YC 211
Query: 211 --LEQAGISCEFKAYPGLGHSIS 231
L + + E + H +S
Sbjct: 212 DRLSKHQVPFEAHFFESGPHGVS 234
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 52.9 bits (127), Expect = 2e-08
Identities = 28/154 (18%), Positives = 40/154 (25%), Gaps = 39/154 (25%)
Query: 130 GIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSGWVPFNASLIDQFTSDAK--- 184
+D + V V G SQGG L+LA L PR K+ F L + +
Sbjct: 196 EVDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLDLAKNAYQEITD 255
Query: 185 -------------------------------KTPILWSHGMADRTVLFEAGQAGPPFLEQ 213
K +L G+ D+ A
Sbjct: 256 YFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFA---AYNN 312
Query: 214 AGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247
+ K YP GH ++ S
Sbjct: 313 IQSKKDIKVYPDYGHEPMRGFGDLAMQFMLELYS 346
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 6e-08
Identities = 19/156 (12%), Positives = 35/156 (22%), Gaps = 50/156 (32%)
Query: 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTL---------------------- 149
L + + +D + + GFS GG +
Sbjct: 90 LGATIDWITTQASAH---HVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQG 146
Query: 150 ---ASVLLYP--------RKLGGGAIFSGWVPFNASLIDQFTSDAKKTP--ILWSHGMAD 196
A +L YP + T + +W D
Sbjct: 147 QHAAIILGYPVIDLTAGFPTTSAARNQITTDARLWAAQRLVTPA---SKPAFVW-QTATD 202
Query: 197 RTVLFEAG----QAGPPFLEQAGISCEFKAYPGLGH 228
+V QA + Q ++ + + H
Sbjct: 203 ESVPPINSLKYVQA----MLQHQVATAYHLFGSGIH 234
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 1e-07
Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 32/156 (20%)
Query: 109 ESSLLKAVRNVHAMIDKEVAAG-IDPNNVFVCGFSQGGALTLASVLLYP----------- 156
+ + + ++ A D+ + +D +++ V G S GG L+ P
Sbjct: 75 SVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPAL 134
Query: 157 ----------RKLGGGAIFSGWVPFNASLIDQ---FTSDAKKTPILWSHGMADRTVLFEA 203
L + + D K +L D V
Sbjct: 135 YKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPV 194
Query: 204 GQAGPPFLEQA---GISCEFKAYPGLGHSISNEELR 236
+ A S + G H++S +E +
Sbjct: 195 MRN----YADAFTNARSLTSRVIAGADHALSVKEHQ 226
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 2e-07
Identities = 29/163 (17%), Positives = 43/163 (26%), Gaps = 40/163 (24%)
Query: 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--------------KLG 160
AVR + + + +D + V G SQGG LT+A+ L +
Sbjct: 157 AVRALEVISSFD---EVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERA 213
Query: 161 GGAIFSGWVPFNASLIDQFTSDAK--------------------KTPILWSHGMADRTVL 200
S + S K P+L S G+ D+
Sbjct: 214 IDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTP 273
Query: 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243
A E K Y GH ++ K
Sbjct: 274 PSTVFA---AYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFK 313
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 49.7 bits (118), Expect = 2e-07
Identities = 34/221 (15%), Positives = 60/221 (27%), Gaps = 34/221 (15%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+L LHGL S + + F L AP + S + E+
Sbjct: 27 LLALHGLQGSKEHILALLPGYAERGFLL---LAFDAPRHGEREGPPPSSKSPRYVEEVY- 82
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ + R V ++ +F+ G S G + + R G
Sbjct: 83 -----RVALGFKEEARRVAEEAER-----RFGLPLFLAGGSLGAFVAHLLLAEGFRPRGV 132
Query: 162 GAIFSGWVP-----------------FNASLIDQFTSDAKKTPILWSHGMADRTVLFEAG 204
A P + A + + P+L HG D V
Sbjct: 133 LAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYG-GVPLLHLHGSRDHIVPLARM 191
Query: 205 QAGPPFLEQAGISCEFK--AYPGLGHSISNEELRNLESWIK 243
+ L G GH+++ R ++++
Sbjct: 192 EKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLE 232
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 3e-07
Identities = 28/158 (17%), Positives = 38/158 (24%), Gaps = 49/158 (31%)
Query: 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTL---------------------- 149
L +AV + + IDP + GFS GG +
Sbjct: 105 LGRAVNLLRQHAAEW---HIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLK 161
Query: 150 --ASVLLYP--------RKLGGGAIFSGWVPFNASLIDQFTSDAKKTP--ILWSHGMADR 197
VL YP K P + SD +W D
Sbjct: 162 PNNVVLGYPVISPLLGFPKDDATLATWTPTPNELAADQHVNSD---NQPTFIW-TTADDP 217
Query: 198 TVLFEAG----QAGPPFLEQAGISCEFKAYPGLGHSIS 231
V A L A I E + H ++
Sbjct: 218 IVPATNTLAYATA----LATAKIPYELHVFKHGPHGLA 251
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* Length = 268 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 6e-07
Identities = 22/112 (19%), Positives = 35/112 (31%), Gaps = 6/112 (5%)
Query: 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG---WVPFNASLIDQ 178
I+ + D + + G S GG + L K S P D
Sbjct: 133 YIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERLFPDG 192
Query: 179 FTSDAKKTPILW-SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229
+ +K +L+ + G D L GQ + I+ + G GH
Sbjct: 193 GKAAREKLKLLFIACGTNDS--LIGFGQRVHEYCVANNINHVYWLIQGGGHD 242
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} Length = 241 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 1e-06
Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 12/160 (7%)
Query: 86 YGAVMPSWFDIHEIPVTASSPKDESSLL-------KAVRNVHAMIDKEVAAGIDPNNVFV 138
Y A+ P + P L + + ++ + G D + + +
Sbjct: 60 YLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHGGDAHRLLI 119
Query: 139 CGFSQGGALTLASVLLYPRKLGGGAIF--SGWVPFNASLIDQFTSDAK--KTPILWSHGM 194
GF GG +T P+ L + + + A P+L +G
Sbjct: 120 TGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEKSLNSPKHPVDIAVDLNAPVLGLYGA 178
Query: 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234
D ++ + + L A + E YP H+ + +
Sbjct: 179 KDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADY 218
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 1e-06
Identities = 22/177 (12%), Positives = 49/177 (27%), Gaps = 46/177 (25%)
Query: 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168
++L + + +A+++ V N+++ G +QGG + LYP + + +
Sbjct: 95 NMTVLNEIEDANAILN-YVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPA 153
Query: 169 VPFNASLIDQFTSDAKKT-------------------------------------PILWS 191
++ T P+
Sbjct: 154 ATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLI 213
Query: 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----LRNLESWIKT 244
HG D V A + +Q + G H S+ + +++
Sbjct: 214 HGTDDTVVSPNASKK----YDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQN 266
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-06
Identities = 20/139 (14%), Positives = 32/139 (23%), Gaps = 35/139 (25%)
Query: 130 GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI---FSGWVPFNASLIDQFTSDAK-- 184
+D + + G SQGG + LA L + + + ++
Sbjct: 188 QVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVDTHPYAEITNF 247
Query: 185 ---------------------------KTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217
K P L+S G+ D A
Sbjct: 248 LKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFA---AYNYYAGP 304
Query: 218 CEFKAYPGLGHSISNEELR 236
E + YP H
Sbjct: 305 KEIRIYPYNNHEGGGSFQA 323
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 6e-06
Identities = 23/143 (16%), Positives = 33/143 (23%), Gaps = 45/143 (31%)
Query: 134 NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAK--------- 184
VFV G S GG + ++ P GG S +P L+ F A+
Sbjct: 93 AKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKS 152
Query: 185 -------------------------------KTPILWSHGMADRTVLFEAGQAGPPFLEQ 213
K P D V +
Sbjct: 153 DESTQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQ---LRDA 209
Query: 214 AGIS--CEFKAYPGLGHSISNEE 234
+ +F Y H I+
Sbjct: 210 LINAARVDFHWYDDAKHVITVNS 232
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} Length = 223 | Back alignment and structure |
|---|
Score = 43.7 bits (103), Expect = 2e-05
Identities = 21/106 (19%), Positives = 26/106 (24%), Gaps = 9/106 (8%)
Query: 129 AGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPI 188
V G S GG L + P + G S + + P
Sbjct: 109 PDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAPSALPHVKA-----PT 163
Query: 189 LWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE 234
L G D V+ A LEQ S P H
Sbjct: 164 LLIVGGYDLPVIAMNEDA----LEQLQTSKRLVIIPRASHLFEEPG 205
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 5e-05
Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 40/155 (25%)
Query: 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG---WV- 169
+ +V A +G + +++ G+S GG +TL ++ + P G + W
Sbjct: 418 GELEDVSAAARWARESG-LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEE 476
Query: 170 ------PFNASLIDQFTSDAK---------------KTPILWSHGMADRTV-------LF 201
+ I+Q T ++ K P+ H L
Sbjct: 477 MYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLM 536
Query: 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELR 236
L G + E P GH+I+ E
Sbjct: 537 GE-------LLARGKTFEAHIIPDAGHAINTMEDA 564
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} Length = 243 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 5e-05
Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 46/238 (19%)
Query: 42 ILWLHGLGDSGPANE----PIKTLFTSPEFKLTKWSFPSAPN--NPVTCNYGAVMPSWFD 95
+L+LHG +G I+ L + + AP + W
Sbjct: 8 LLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCD---YIDAPVLLEKKDLPFEMDDEKWQA 64
Query: 96 IHEIPVT-----ASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALT-- 148
+ V S E + + +++V I + G SQG AL+
Sbjct: 65 TLDADVNRAWFYHSEISHELDISEGLKSVVDHIKAN------GPYDGIVGLSQGAALSSI 118
Query: 149 ----LASVLLYPRKLGGGAIFSGWVP------------FNASLIDQFTSDAK-KTPILWS 191
++ ++ + + SG+ D F KT +++
Sbjct: 119 ITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEKFRDSFAVKPDMKTKMIFI 178
Query: 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAY----PGLGHSI--SNEELRNLESWIK 243
+G +D+ V + +A + K PG GH + + +R + I
Sbjct: 179 YGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPG-GHMVPNKKDIIRPIVEQIT 235
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 7e-05
Identities = 24/147 (16%), Positives = 38/147 (25%), Gaps = 45/147 (30%)
Query: 127 VAAG-IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG---WVPFNASLIDQFTS- 181
G D + V G S GG +S L+ G + + + F S
Sbjct: 495 AEEGTADRARLAVRGGSAGGWTAASS-LVSTDVYACGTVLYPVLDLLGWADGGTHDFESR 553
Query: 182 -------------------------DAKKTPILWSHGMADRTV-------LFEAGQAGPP 209
D + P L G+ D EA
Sbjct: 554 YLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEA------ 607
Query: 210 FLEQAGISCEFKAYPGLGHSISNEELR 236
+ G+ + ++ G GH +E
Sbjct: 608 -VAGCGVPHAYLSFEGEGHGFRRKETM 633
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 9e-05
Identities = 25/180 (13%), Positives = 54/180 (30%), Gaps = 46/180 (25%)
Query: 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168
+ +L K + N+ A++D ++++ G SQGG + + + + S
Sbjct: 76 DHTLFKWLTNILAVVD-YAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPA 134
Query: 169 VPFNASLID---------------------------QFTSDAK-----------KTPILW 190
+ A+ P+L
Sbjct: 135 AMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLI 194
Query: 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIKTRMS 247
HG D V +EA A + +C+ PG H + ++ ++ +++
Sbjct: 195 VHGDQDEAVPYEASVA----FSKQYKNCKLVTIPGDTHCYDHHLELVTEAVKEFMLEQIA 250
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* Length = 403 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 1e-04
Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 18/127 (14%)
Query: 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG---WVPFN 172
+ + ++ + V G S GG L + L +P + G SG W
Sbjct: 258 QQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG 317
Query: 173 ASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPF----------LEQAGISCEFKA 222
K + ++ EAG P L S ++
Sbjct: 318 GQQEGVLLEKLKAGEVSAEG----LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQ 373
Query: 223 YPGLGHS 229
G GH
Sbjct: 374 VDG-GHD 379
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A Length = 259 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 2e-04
Identities = 21/143 (14%), Positives = 40/143 (27%), Gaps = 11/143 (7%)
Query: 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167
+ + + A +D + A P G S G + L R + +
Sbjct: 123 EGGGTAAVIADWAAALD-FIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLM 180
Query: 168 WVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE--FKAYPG 225
V + P+ + D V ++G L + + PG
Sbjct: 181 GVEGVNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLE----LFGKLGTKQKTLHVNPG 236
Query: 226 LGHSI--SNEELRNLESWIKTRM 246
HS + E ++ R+
Sbjct: 237 -KHSAVPTWEMFAGTVDYLDQRL 258
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A Length = 322 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 2e-04
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 42/142 (29%)
Query: 127 VAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI-----FSGWVPFNASLIDQFTS 181
+ + + + G S GG LT A +L ++ G S +V S ++
Sbjct: 142 LKTAGSADRIIIAGDSAGGGLTTA-SMLKAKEDGLPMPAGLVMLSPFVDLTLSR-WSNSN 199
Query: 182 DAKKTPILWSHGMADRTVLFEAGQ--------------AG-PPF---------------- 210
A + + + + + L+ G+ +G P
Sbjct: 200 LADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALLSDSTT 259
Query: 211 ----LEQAGISCEFKAYPGLGH 228
AG+S E K +P + H
Sbjct: 260 LAERAGAAGVSVELKIWPDMPH 281
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} Length = 326 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 3e-04
Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 48/173 (27%)
Query: 125 KEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG-----GGAIFSGWVPFNASLIDQF 179
++ + + NV V G GGAL L+ + + S + S D
Sbjct: 155 DQLVSEVGHQNVVVMGDGSGGALALS-FVQSLLDNQQPLPNKLYLISPILDATLSNKDIS 213
Query: 180 TSDAKKTPILWSHGMADRTVLFEAGQ--------------AG-PPF-------------- 210
+ ++ +L G+ + + G G PP
Sbjct: 214 DALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDM 273
Query: 211 ------LEQAGISCEFKAYPGLGH-----SI--SNEELRNLESWIKTRMSCSS 250
+ Q EF YP + H I S++ ++ + I ++ ++
Sbjct: 274 KLFEQMMLQHHQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVTQNN 326
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 11/75 (14%)
Query: 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS-CEFKAYPGLGHSISNE--ELRN---- 237
P L G ADR + +E A K Y G H + E E+ N
Sbjct: 228 TVPFLLLQGSADRLCDSKGAYL---LMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFH 284
Query: 238 -LESWIKTRMSCSSS 251
+ W+ R + + +
Sbjct: 285 EINMWVSQRTATAGT 299
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 39.3 bits (92), Expect = 6e-04
Identities = 15/75 (20%), Positives = 23/75 (30%), Gaps = 11/75 (14%)
Query: 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS-CEFKAYPGLGHSISNEE-------LR 236
P L G ADR + +E A K Y G H + E
Sbjct: 246 TVPFLLLQGSADRLCDSKGAYL---LMELAKSQDKTLKIYEGAYHVLHKELPEVTNSVFH 302
Query: 237 NLESWIKTRMSCSSS 251
+ W+ R + + +
Sbjct: 303 EINMWVSQRTATAGT 317
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 7e-04
Identities = 22/134 (16%), Positives = 39/134 (29%), Gaps = 30/134 (22%)
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF----------------SGW------ 168
ID V V G GG L+ + G F S +
Sbjct: 575 IDRTRVAVFGKDYGGYLSTYILPAKGENQGQ--TFTCGSALSPITDFKLYASAFSERYLG 632
Query: 169 VP------FNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222
+ + + + S ++ L H AD + F+ L + + +
Sbjct: 633 LHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQI 692
Query: 223 YPGLGHSISNEELR 236
YP H ++ L+
Sbjct: 693 YPDESHYFTSSSLK 706
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 7e-04
Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 40/144 (27%)
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPR--KLG-GGAIFSGW-------------VPF--- 171
ID + + G+S GG ++ ++ K G A S W +P
Sbjct: 575 IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYASVYTERFMGLPTKDD 634
Query: 172 ------NASLIDQFTSDAKKTPILWSHGMADRTVLF-------EAGQAGPPFLEQAGISC 218
N++++ + L HG AD V F +A L A +
Sbjct: 635 NLEHYKNSTVMA-RAEYFRNVDYLLIHGTADDNVHFQNSAQIAKA-------LVNAQVDF 686
Query: 219 EFKAYPGLGHSISNEELRNLESWI 242
+ Y H +S +L + +
Sbjct: 687 QAMWYSDQNHGLSGLSTNHLYTHM 710
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* Length = 318 | Back alignment and structure |
|---|
Score = 39.4 bits (91), Expect = 7e-04
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 130 GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA-IFSGWVPFNASLIDQFTSDAKKTPI 188
++PN+V V G + GG + + Y G +F+G P++ + +Q+ +
Sbjct: 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAG-GPYDCA-RNQYYTSCMYNGY 64
Query: 189 LWSHGMADRTVLFEAGQAGPP 209
+ Q
Sbjct: 65 PSITTPTANMKSWSGNQIASV 85
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 251 | |||
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 100.0 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 100.0 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 100.0 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 100.0 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.97 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.97 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.97 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.97 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.96 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.96 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.95 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.95 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.95 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.95 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.95 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.94 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.94 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.94 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.94 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.94 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.94 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.94 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.93 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.93 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.93 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.93 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.93 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.93 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.93 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.93 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.93 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.93 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.93 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.93 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.93 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.93 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.93 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.93 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.93 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.92 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.92 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.92 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.92 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.92 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.92 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.92 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.92 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.92 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.92 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.92 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.92 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.92 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.92 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.92 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.92 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.92 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.91 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.91 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.91 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.91 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.91 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.91 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.91 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.91 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.91 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.91 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.91 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.91 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.91 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.91 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.91 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.91 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.91 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.91 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.91 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.91 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.91 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.91 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.91 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.91 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.9 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.9 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.9 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.9 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.9 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.9 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.9 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.9 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.9 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.9 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.9 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.9 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.9 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.9 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.9 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.9 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.9 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.9 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.9 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.9 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.9 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.9 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.9 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.9 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.9 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.9 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.9 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.9 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.9 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.9 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.9 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.89 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.89 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.89 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.89 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.89 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.89 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.89 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.89 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.89 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.89 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.89 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.89 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.89 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.89 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.89 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.89 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.89 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.89 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.89 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.89 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.89 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.89 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.89 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.89 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.89 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.89 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.89 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.89 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.89 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.89 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.88 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.88 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.88 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.88 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.88 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.88 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.88 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.88 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.88 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.88 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.88 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.88 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.88 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.88 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.88 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.87 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.87 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.87 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.87 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.87 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.87 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.87 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.87 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.86 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.86 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.86 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.86 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.86 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.86 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.86 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.85 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.85 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.84 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.83 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.83 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.83 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.82 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.82 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.82 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.82 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.81 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.81 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.81 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.81 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.8 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.8 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.67 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.79 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.79 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.78 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.78 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.78 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.78 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.75 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.74 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.73 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.72 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.71 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.71 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.7 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.7 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.69 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.69 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.68 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.68 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.66 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.66 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.65 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.63 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.6 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.6 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.59 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.59 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.57 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.56 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.52 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.51 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.51 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.51 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.49 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.47 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.45 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.45 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.44 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.42 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.39 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.39 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.31 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.14 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.12 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.08 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.07 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 99.06 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 99.04 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 99.04 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.04 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 99.03 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 99.01 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.95 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.91 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.88 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.87 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.83 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.76 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.98 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.73 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.7 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.67 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.51 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.46 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.43 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.34 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 97.15 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.89 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.69 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 96.44 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.39 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.37 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.33 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.3 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.28 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 96.26 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 96.15 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.11 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.08 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 95.92 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 95.78 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 95.66 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 95.58 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 95.42 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 95.06 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 94.8 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 93.37 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 93.28 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.15 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 90.21 | |
| 2qub_A | 615 | Extracellular lipase; beta roll, alpha/beta hydrol | 89.09 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 88.79 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 87.84 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 86.03 |
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-36 Score=224.74 Aligned_cols=213 Identities=31% Similarity=0.531 Sum_probs=175.8
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCC-CCCCChhHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTA-SSPKDESSL 112 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~-~~~~~~~~~ 112 (251)
|.++.+++|||+||+|+++.++..+++.+.. .+..+.+.+|.+|..+.....+..+++||+....+... ....+.+.+
T Consensus 32 P~~~~~~~VI~LHG~G~~~~dl~~l~~~l~~-~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i 110 (246)
T 4f21_A 32 PAKQARFCVIWLHGLGADGHDFVDIVNYFDV-SLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVDVEGI 110 (246)
T ss_dssp CSSCCCEEEEEEEC--CCCCCGGGGGGGCCS-CCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSCCC-C
T ss_pred CCCcCCeEEEEEcCCCCCHHHHHHHHHHhhh-cCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhhHHHH
Confidence 5566778999999999999999999887763 45567888898888776666666778899876542221 122345667
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.+.++.+..+++...+.+++.++|+++|+|+||.+++.++.++|+.+++++.++|+++..............++|++++|
T Consensus 111 ~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~~~~~~~~~~~~Pvl~~H 190 (246)
T 4f21_A 111 NSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNFKGKITSINKGLPILVCH 190 (246)
T ss_dssp HHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHHSTTCCGGGTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccccccccccccCCchhhcc
Confidence 77788888888776678899999999999999999999999999999999999999987766655555566789999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
|+.|+++|.+.++.+++.|++.|.+++++.|+|+||....++++++.+||++.|+
T Consensus 191 G~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 191 GTDDQVLPEVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp ETTCSSSCHHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHHHHTT
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999885
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=213.52 Aligned_cols=194 Identities=25% Similarity=0.368 Sum_probs=159.8
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
|.++.+++||++||+|++..+|..+++.+...++.++.++.++ +.||+.... .....+...+.
T Consensus 17 P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g--------------~~w~~~~~~---~~~~~~~~~~~ 79 (210)
T 4h0c_A 17 PVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATN--------------NSWYPYSFM---APVQQNQPALD 79 (210)
T ss_dssp CTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGG--------------GCSSSSCTT---SCGGGGTTHHH
T ss_pred CcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCC--------------CCccccccC---CCcccchHHHH
Confidence 5567789999999999999999999999988888777766552 456654432 11122344566
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
+..+.+..+++.+.+.+++.+||+|+|+|+||.+++.++.++|+++++++.++|+++..............++|++++||
T Consensus 80 ~~~~~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~~~~~~~~~~~~~Pvl~~hG 159 (210)
T 4h0c_A 80 SALALVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQELAIGNYKGDFKQTPVFISTG 159 (210)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSCCGGGCCBCCTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhhhhhhhhhhccCCceEEEec
Confidence 66667777776665778999999999999999999999999999999999999988766555555555557899999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
++|+++|.+.++++++.|++.|.++++++|||.+|.+..++++.+.+||.+
T Consensus 160 ~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~~~el~~i~~wL~k 210 (210)
T 4h0c_A 160 NPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTISGDEIQLVNNTILK 210 (210)
T ss_dssp ESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCCHHHHHHHHHTTTC
T ss_pred CCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcCHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999853
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=212.22 Aligned_cols=208 Identities=24% Similarity=0.365 Sum_probs=164.6
Q ss_pred CCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 33 EQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 33 ~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
...+++.|+|||+||+|++..+|..+++.+... +..+.+.+|.+|..... ...+..||+....+.. ....+.+++
T Consensus 60 ~~~~~~~plVI~LHG~G~~~~~~~~~~~~l~~~-~~~~~~v~P~Ap~~~~~---~~~G~~Wfd~~~~~~~-~~~~~~~~~ 134 (285)
T 4fhz_A 60 AAPGEATSLVVFLHGYGADGADLLGLAEPLAPH-LPGTAFVAPDAPEPCRA---NGFGFQWFPIPWLDGS-SETAAAEGM 134 (285)
T ss_dssp SCTTCCSEEEEEECCTTBCHHHHHTTHHHHGGG-STTEEEEEECCSEECTT---SSSCEESSCCHHHHCC-CHHHHHHHH
T ss_pred CCCCCCCcEEEEEcCCCCCHHHHHHHHHHHHHh-CCCeEEEecCCCccccc---CCCcccccccccccCc-ccchhhHHH
Confidence 345678899999999999998888888877643 45567777776643222 2234678865432110 011233456
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEE
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWS 191 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~ 191 (251)
....+.+.++++.+. +.+++.++|+|+|+|+||.+++.++.++|+.+++++.++|+++....... ....++|++++
T Consensus 135 ~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~~~---~~~~~~Pvl~~ 211 (285)
T 4fhz_A 135 AAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAE---EARSKPPVLLV 211 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHHHH---HCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhhhh---hhhhcCcccce
Confidence 666777888877766 78899999999999999999999999999999999999998876544322 23467899999
Q ss_pred ccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 192 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
||+.|.++|.+.++.+.+.|++.|.++++++|+|.||.+..++++++.+||+++|..
T Consensus 212 hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~~~~l~~~~~fL~~~Lpd 268 (285)
T 4fhz_A 212 HGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLKERLPD 268 (285)
T ss_dssp EETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHCC-
T ss_pred eeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCcC
Confidence 999999999999999999999999999999999999999999999999999999963
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=202.08 Aligned_cols=214 Identities=25% Similarity=0.446 Sum_probs=173.5
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcce--EEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKL--TKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+.+++.|+||++||++++...|..+++.+...++.. +.+.+|..+.++.....+.....|++.... ..........
T Consensus 18 ~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~ 95 (239)
T 3u0v_A 18 PAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKI--TNDCPEHLES 95 (239)
T ss_dssp CSSCCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSS--SSSSCCCHHH
T ss_pred CCCCCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCC--Ccccccchhh
Confidence 445678999999999999988988888777663322 455555555544455556667888876554 2233455678
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCC-EEE
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTP-ILW 190 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p-~l~ 190 (251)
+.+.++.+..+++...+.+++.++++|+|||+||.+++.++.++|+.++++++++++.+...............+| +++
T Consensus 96 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pp~li 175 (239)
T 3u0v_A 96 IDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQ 175 (239)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCHHHHHHHHCCSCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhHHHHHHHhhccCCCCEEE
Confidence 8888888888888766677888999999999999999999999999999999999998877665555444556677 999
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
++|++|.+++.+.++.+.+.+++.+.++++++++|++|.+..+..+.+.+||.+++...
T Consensus 176 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 234 (239)
T 3u0v_A 176 CHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLPGE 234 (239)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHCC--
T ss_pred EeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999643
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=193.49 Aligned_cols=207 Identities=27% Similarity=0.521 Sum_probs=168.3
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcC--CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+..++.|+||++||++++...|..+++.+.+ .||.++.+|+|+.+ .....|.....|++....+. ........
T Consensus 9 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~---~~~~~g~~~~~w~d~~g~g~--~~~~~~~~ 83 (218)
T 1auo_A 9 PAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRP---VTINGGYEMPSWYDIKAMSP--ARSISLEE 83 (218)
T ss_dssp CSSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEE---EGGGTTEEEECSSCEEECSS--SCEECHHH
T ss_pred CCCCCCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCcc---ccCCCCCcccceecCcCCCc--ccccchHH
Confidence 3456789999999999999999999999988 89999999887532 22334666677877665422 12334566
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH-hcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEE
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL-LYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILW 190 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~ 190 (251)
+.+.++++..+++.+.+.+++.++++++|||+||.+++.++. ++|++++++++++++.+. ..+...+.....++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~P~l~ 162 (218)
T 1auo_A 84 LEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT-FGDELELSASQQRIPALC 162 (218)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT-CCTTCCCCHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC-chhhhhhhhcccCCCEEE
Confidence 777788888888766555778889999999999999999999 999999999999998875 222233333456899999
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++|++|.+++.+.++.+.+.+++.+.++++++++ ++|.+..+..+.+.+||.++|+
T Consensus 163 i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 163 LHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218 (218)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHHC
T ss_pred EEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCCccCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999988889999999 9999999999999999999874
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-30 Score=193.09 Aligned_cols=210 Identities=33% Similarity=0.489 Sum_probs=171.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..++.|+||++||++++...|..+++.+.+.||.++.+|.|+.+. ....+.....||+.... .........++.+
T Consensus 19 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~~w~d~~g~--~~~~~~~~~~~~~ 93 (232)
T 1fj2_A 19 ARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPV---TLNMNVAMPSWFDIIGL--SPDSQEDESGIKQ 93 (232)
T ss_dssp SSCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEE---GGGTTEEEECSSCBCCC--STTCCBCHHHHHH
T ss_pred CCCCCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCcccc---ccccccccccccccccC--CcccccccHHHHH
Confidence 456789999999999998889999999988899999998876432 23345566778777665 2333445677888
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhh-cccCCCCCEEEEcc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF-TSDAKKTPILWSHG 193 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~p~l~~~g 193 (251)
.++++.++++.+.+.+++.++++++|||+||.+++.++.++|+.++++++++++.+......... .....++|+++++|
T Consensus 94 ~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G 173 (232)
T 1fj2_A 94 AAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHG 173 (232)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSCSSCCCSTTTTCCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccccccccccccCCCCEEEEec
Confidence 88888888886655577778999999999999999999999999999999999887654432211 12457899999999
Q ss_pred CCCCcccchhcccchHHHHhcCCe--eEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGIS--CEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
++|..++.+.++.+.+.+++.+.+ ++++++++++|.+..+..+.+.+||.++++..
T Consensus 174 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~~l~~~ 231 (232)
T 1fj2_A 174 DCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPPI 231 (232)
T ss_dssp TTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHHHSCCC
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999988754 99999999999999999999999999998753
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-30 Score=192.07 Aligned_cols=205 Identities=33% Similarity=0.602 Sum_probs=169.9
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcC--CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTS--PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.++++.|+||++||++++...|..+++.+++ .|+.++.+|+|+.+. +...|.....|++....+. .......+
T Consensus 19 ~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~---~~~~g~~~~~w~d~~g~g~--~~~~~~~~ 93 (226)
T 3cn9_A 19 DAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAV---TVNGGWVMPSWYDILAFSP--ARAIDEDQ 93 (226)
T ss_dssp CCTTCCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEEC---GGGTSCEEECSSCBCCSSS--TTCBCHHH
T ss_pred cCCCCCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCcc---ccCCCCccccccccccccc--cccccchh
Confidence 4556789999999999999999999998887 899999999986543 2234666678887766532 22345677
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH-hcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEE
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL-LYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILW 190 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~ 190 (251)
+.+.++.+..+++.+.+.+++.++++|+|||+||.+++.++. ++|+.++++++++++.+..... .+.....++|+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~P~li 171 (226)
T 3cn9_A 94 LNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL--ALDERHKRIPVLH 171 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC--CCCTGGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh--hhcccccCCCEEE
Confidence 778888888888765555777789999999999999999999 9999999999999988765443 2333457899999
Q ss_pred EccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 191 SHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 191 ~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++|++|.+++.+.++.+.+.+.+.+.++++++++ ++|.+..+..+.+.+||.++|
T Consensus 172 i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 172 LHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEVSLEEIHDIGAWLRKRL 226 (226)
T ss_dssp EEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSCCHHHHHHHHHHHHHHC
T ss_pred EecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCcchhhHHHHHHHHHhhC
Confidence 9999999999999999999999988889999999 999999999999999999875
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-29 Score=184.74 Aligned_cols=195 Identities=16% Similarity=0.162 Sum_probs=159.7
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.+.| ||++||++++...|..+++.+. .++.++.+|.|.. +...+.|++....+.......+..++..
T Consensus 13 ~~~~~p-vv~lHG~g~~~~~~~~~~~~l~-~~~~v~~~~~~~~---------~~g~~~~~~~~g~g~~~~~~~~~~~~~~ 81 (209)
T 3og9_A 13 RKDLAP-LLLLHSTGGDEHQLVEIAEMIA-PSHPILSIRGRIN---------EQGVNRYFKLRGLGGFTKENFDLESLDE 81 (209)
T ss_dssp CTTSCC-EEEECCTTCCTTTTHHHHHHHS-TTCCEEEECCSBC---------GGGCCBSSCBCSCTTCSGGGBCHHHHHH
T ss_pred CCCCCC-EEEEeCCCCCHHHHHHHHHhcC-CCceEEEecCCcC---------CCCcccceecccccccccCCCCHHHHHH
Confidence 345678 9999999999999999999887 7899999998743 1224677764433222233445667777
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
.++.+.+.++.+. +.+++.++++|+|||+||.+++.++.++|+.+++++++++..+..... ......+|+++++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~p~li~~G 157 (209)
T 3og9_A 82 ETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQ----TVQLDDKHVFLSYA 157 (209)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCC----CCCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcccc----cccccCCCEEEEcC
Confidence 8888888887765 678888999999999999999999999999999999999987654332 22346799999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
++|.+++.+.++.+.+.+++.+.++++++++ ++|.+..+..+++.+||.+.
T Consensus 158 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 158 PNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp TTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCCHHHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998 59999999999999999864
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-28 Score=180.07 Aligned_cols=192 Identities=18% Similarity=0.249 Sum_probs=153.1
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.|+||++||++++...|..+++.+.+ ++.++.+|.|+... + ...|++.... ...+..++...+
T Consensus 28 ~~~p~vv~lHG~g~~~~~~~~~~~~l~~-~~~vv~~d~~~~~~-------~--g~~~~~~~~~-----~~~~~~~~~~~~ 92 (223)
T 3b5e_A 28 ESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQE-------D--GFRWFERIDP-----TRFEQKSILAET 92 (223)
T ss_dssp SCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEET-------T--EEESSCEEET-----TEECHHHHHHHH
T ss_pred CCCCEEEEEecCCCCHHHHHHHHHhcCC-CceEEEeCCCCCcC-------C--ccccccccCC-----CcccHHHHHHHH
Confidence 4459999999999999999999998875 99999999764211 1 3455543321 113456677777
Q ss_pred HHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCC
Q 025550 117 RNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMA 195 (251)
Q Consensus 117 ~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~ 195 (251)
+++.++++.+. +.+++.++++|+|||+||.+++.++.++|+.++++++++++.+.... ......++|+++++|++
T Consensus 93 ~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~~P~li~~G~~ 168 (223)
T 3b5e_A 93 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHV----PATDLAGIRTLIIAGAA 168 (223)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSC----CCCCCTTCEEEEEEETT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcccc----ccccccCCCEEEEeCCC
Confidence 88888877665 55788899999999999999999999999999999999998765322 12234678999999999
Q ss_pred CCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 196 DRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 196 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
|.+++.+.++ +.+.+++.+.++++++++ ++|.+..+..+.+.+||++.+...
T Consensus 169 D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~~~~~~~i~~~l~~~~~~~ 220 (223)
T 3b5e_A 169 DETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIGDPDAAIVRQWLAGPIAIA 220 (223)
T ss_dssp CTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCCHHHHHHHHHHHHCC----
T ss_pred CCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcCHHHHHHHHHHHHhhhhhc
Confidence 9999999999 999999999999999999 899999999999999999887643
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-28 Score=184.64 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=149.4
Q ss_pred EEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCC---CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC
Q 025550 10 FTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
.+....++..+..|+..+.... .+.+.|+||++||++ ++...+..+++.|++.||.++.+|+|+++.+.
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~---~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~----- 88 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQN---ENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGT----- 88 (276)
T ss_dssp EECCCBTTBEEEEECCCC---------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCC-----
T ss_pred ccccCCCCeEEEEEEeCCcccc---cCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcC-----
Confidence 3444556677777665532111 236789999999955 34555667888888899999999999875521
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEe
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIF 165 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~ 165 (251)
+ ...+ +....++..+++++.+..+ +.+++.++++|+|||+||.+++.++.. .+..+++++++
T Consensus 89 ~--~~~~------------~~~~~d~~~~~~~l~~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~ 151 (276)
T 3hxk_A 89 N--YNFL------------SQNLEEVQAVFSLIHQNHK---EWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILC 151 (276)
T ss_dssp C--SCTH------------HHHHHHHHHHHHHHHHHTT---TTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEE
T ss_pred C--CCcC------------chHHHHHHHHHHHHHHhHH---HcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEe
Confidence 0 0000 1112233333333332221 345788899999999999999999988 78889999999
Q ss_pred ccCCCCcchh-----------------hhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 166 SGWVPFNASL-----------------IDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 166 ~~~~~~~~~~-----------------~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
+|........ ..........+|+++++|++|.++|.+.++.+++.+++.+.++++++++|++|
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H 231 (276)
T 3hxk_A 152 YPVTSFTFGWPSDLSHFNFEIENISEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPH 231 (276)
T ss_dssp EECCBTTSSCSSSSSSSCCCCSCCGGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCT
T ss_pred cCcccHHhhCCcchhhhhcCchhhhhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 9977632221 11111234678999999999999999999999999999999999999999999
Q ss_pred CCCH-----------------HHHHHHHHHHHHhhcC
Q 025550 229 SISN-----------------EELRNLESWIKTRMSC 248 (251)
Q Consensus 229 ~~~~-----------------~~~~~~~~~l~~~l~~ 248 (251)
.+.. +..+.+.+||++..+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~ 268 (276)
T 3hxk_A 232 GVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKN 268 (276)
T ss_dssp TCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHT
T ss_pred CccccCccccccccccCchHHHHHHHHHHHHHhCccc
Confidence 7642 2367788898888754
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=174.04 Aligned_cols=215 Identities=13% Similarity=0.153 Sum_probs=149.7
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMP 91 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (251)
.+..++..+..|+..+. ...++.|+||++||++++...+..+++.|++.||.++.+|+++.+..+..... ..
T Consensus 10 ~~~~~~~~~~~~~~~p~-----~~~~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~---~~ 81 (241)
T 3f67_A 10 SIPSQGENMPAYHARPK-----NADGPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHD---IP 81 (241)
T ss_dssp EEEETTEEEEEEEEEET-----TCCSCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCS---HH
T ss_pred EEecCCcceEEEEecCC-----CCCCCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhh---HH
Confidence 33446777777766532 23356799999999999888888899999999999999999876443211100 00
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
.++.. ..........++++.++++.+.+..++.++++++|||+||.+++.++.++|+ +++++++++....
T Consensus 82 ~~~~~---------~~~~~~~~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~ 151 (241)
T 3f67_A 82 TLFKE---------LVSKVPDAQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVG 151 (241)
T ss_dssp HHHHH---------TGGGSCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSC
T ss_pred HHHHH---------hhhcCCchhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccC
Confidence 00000 0001122344556666666554444667899999999999999999999997 7777777776543
Q ss_pred cchhh----hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--------H----HHH
Q 025550 172 NASLI----DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--------N----EEL 235 (251)
Q Consensus 172 ~~~~~----~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--------~----~~~ 235 (251)
..... ......+.++|+++++|++|..++.+.++.+.+.+++.+.+++++++++++|.+. . +..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~ 231 (241)
T 3f67_A 152 EKSLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAFNADYRASYHEESAKDGW 231 (241)
T ss_dssp CCCSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHH
T ss_pred CCccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcceecCCCCCCCHHHHHHHH
Confidence 22111 1111234689999999999999999999999999999888999999999999875 2 235
Q ss_pred HHHHHHHHH
Q 025550 236 RNLESWIKT 244 (251)
Q Consensus 236 ~~~~~~l~~ 244 (251)
+.+.+||++
T Consensus 232 ~~~~~fl~~ 240 (241)
T 3f67_A 232 QRMLAWFAQ 240 (241)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 666666654
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=171.91 Aligned_cols=188 Identities=18% Similarity=0.318 Sum_probs=149.7
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEE--EccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKW--SFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
++.|+||++||++++...|..+++.|.+ |+.++.+ |+++.+. ..|+..... ......+..+
T Consensus 36 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~-----------s~~~~~~~~-----~~~~~~~~~~ 98 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGM-----------PRFFRRLAE-----GIFDEEDLIF 98 (226)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTE-----------EESSCEEET-----TEECHHHHHH
T ss_pred CCCcEEEEEecCCCChhHHHHHHHHhcc-CceEEEecCcccCCcc-----------hhhccccCc-----cCcChhhHHH
Confidence 5679999999999999999999998887 9999999 6664432 222221110 1123455566
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
.+..+.+.++.+. +.+++.++++++|||+||.+++.++..+|+.+++++++++..+..... .....++|+++++|
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~p~l~~~G 174 (226)
T 2h1i_A 99 RTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQ----LANLAGKSVFIAAG 174 (226)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCC----CCCCTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCccc----cccccCCcEEEEeC
Confidence 6666666666554 666788899999999999999999999999999999999987654321 12235799999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++|..++.+.++.+.+.+.+.+.++++ ++++++|.+..+..+.+.+||.++|
T Consensus 175 ~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 175 TNDPICSSAESEELKVLLENANANVTM-HWENRGHQLTMGEVEKAKEWYDKAF 226 (226)
T ss_dssp SSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCCHHHHHHHHHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCCHHHHHHHHHHHHHhC
Confidence 999999999999999999988888898 9999999999999999999998865
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-27 Score=180.30 Aligned_cols=180 Identities=16% Similarity=0.149 Sum_probs=131.6
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.||++||++++...|..+++.|+++||.++++|+||++.++... ......+.++
T Consensus 50 ~~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~-----------------------~~~~~~~~~~ 106 (281)
T 4fbl_A 50 SRIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEM-----------------------AASTASDWTA 106 (281)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHH-----------------------HTCCHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccc-----------------------cCCCHHHHHH
Confidence 44679999999999999999999999999999999999886542110 0112233344
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------------- 178 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------------- 178 (251)
++.++++.+.. ..++++|+||||||.+++.++.++|+.++++|++++...........
T Consensus 107 d~~~~~~~l~~---~~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (281)
T 4fbl_A 107 DIVAAMRWLEE---RCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIK 183 (281)
T ss_dssp HHHHHHHHHHH---HCSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCS
T ss_pred HHHHHHHHHHh---CCCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhh
Confidence 55555554322 24689999999999999999999999999999999855432211000
Q ss_pred ----------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 179 ----------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 179 ----------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
....++++|+|+++|++|.+++++.++.+++.+.. .++++++++++||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~--~~~~l~~~~~~gH~~ 261 (281)
T 4fbl_A 184 AEGVKELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGS--TEKELLWLENSYHVA 261 (281)
T ss_dssp STTCCCCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCC--SSEEEEEESSCCSCG
T ss_pred hHHHHHhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCC--CCcEEEEECCCCCcC
Confidence 00124789999999999999999988777776643 467999999999986
Q ss_pred CHH-----HHHHHHHHHHHh
Q 025550 231 SNE-----ELRNLESWIKTR 245 (251)
Q Consensus 231 ~~~-----~~~~~~~~l~~~ 245 (251)
..+ ..+.+.+||+++
T Consensus 262 ~~e~~~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 262 TLDNDKELILERSLAFIRKH 281 (281)
T ss_dssp GGSTTHHHHHHHHHHHHHTC
T ss_pred ccccCHHHHHHHHHHHHHhC
Confidence 532 246677777754
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-25 Score=168.12 Aligned_cols=197 Identities=15% Similarity=0.074 Sum_probs=144.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.|++.||.++.+|+|+.+.+... +...... .-...........++
T Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~---------~~~~~~~---~~~~~~~~~~~~~~~ 90 (238)
T 1ufo_A 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGP---------PPSSKSP---RYVEEVYRVALGFKE 90 (238)
T ss_dssp CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCC---------CCCTTST---THHHHHHHHHHHHHH
T ss_pred CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCC---------CCccccc---chhhhHHHHHHHHHH
Confidence 6799999999999998898899999989999999999977543211 1000000 000000123445566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch--h-------------hhhhccc
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--L-------------IDQFTSD 182 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--~-------------~~~~~~~ 182 (251)
++.++++.+.+.+. ++++++|||+||.+++.++.++|+.+++++++++....... . .......
T Consensus 91 d~~~~~~~l~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (238)
T 1ufo_A 91 EARRVAEEAERRFG--LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGE 168 (238)
T ss_dssp HHHHHHHHHHHHHC--CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCTTCCCCCHHHHHHHHSCGGGCGG
T ss_pred HHHHHHHHHHhccC--CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhhhhccCCcccchhhcCChhhhhh
Confidence 66666665543332 78999999999999999999999888888877764332110 0 0001112
Q ss_pred CC-CCCEEEEccCCCCcccchhcccchHHHH-hcCC-eeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 183 AK-KTPILWSHGMADRTVLFEAGQAGPPFLE-QAGI-SCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 183 ~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.. ++|+++++|++|..++.+.++.+.+.+. +.+. ++++++++|++|.+..+..+.+.+||.++++.
T Consensus 169 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 169 AYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp GGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred hccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 34 7999999999999999999999999998 7776 78999999999999999999999999999864
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-25 Score=168.71 Aligned_cols=194 Identities=15% Similarity=0.164 Sum_probs=142.6
Q ss_pred eEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC-----chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 18 IIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA-----NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
..+..++.. +.+++.|+||++||+++.... |..+++.|++.||.++.+|+|+.+.+...
T Consensus 33 g~l~~~~~~-------p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~--------- 96 (249)
T 2i3d_A 33 GRLEGRYQP-------SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE--------- 96 (249)
T ss_dssp EEEEEEEEC-------CSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC---------
T ss_pred ceEEEEEEc-------CCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC---------
Confidence 366666555 234667999999998544333 35688888889999999999977543110
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
+ ...... .+++.++++.+.....+.++++++|||+||.+++.++.++|+ +++++++++.....
T Consensus 97 ~------------~~~~~~----~~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 159 (249)
T 2i3d_A 97 F------------DHGAGE----LSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTY 159 (249)
T ss_dssp C------------CSSHHH----HHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTS
T ss_pred C------------CCccch----HHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhh
Confidence 0 111122 244445554444445567799999999999999999999998 99999999977543
Q ss_pred chhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHh-cCCeeEEEEeCCCCCCCC---HHHHHHHHHHHHHhhcC
Q 025550 173 ASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ-AGISCEFKAYPGLGHSIS---NEELRNLESWIKTRMSC 248 (251)
Q Consensus 173 ~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~-~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~ 248 (251)
.. ......++|+++++|++|..++.+.++.+.+.+.+ .+.+++++++++++|.+. .+..+.+.+||.+.+..
T Consensus 160 ~~----~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~i~~fl~~~l~~ 235 (249)
T 2i3d_A 160 DF----SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRLNG 235 (249)
T ss_dssp CC----TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHHHHTT
T ss_pred hh----hhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCcccccCHHHHHHHHHHHHHHhcCC
Confidence 21 11234689999999999999999998888888875 455789999999999876 33467888999988864
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-26 Score=173.54 Aligned_cols=191 Identities=15% Similarity=0.191 Sum_probs=145.8
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEE--EccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKW--SFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
++++.|+||++||++++...|..+++.|++ +|.++.+ |+++++. ..|++.... ......+.
T Consensus 58 ~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~-----------s~~~~~~~~-----~~~~~~~~ 120 (251)
T 2r8b_A 58 GVAGAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHGA-----------ARFFRRTGE-----GVYDMVDL 120 (251)
T ss_dssp CCTTSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETTE-----------EESSCBCGG-----GCBCHHHH
T ss_pred CCCCCcEEEEEeCCCCCHhHHHHHHHhcCC-CceEEEecCCcCCCCC-----------cccccCCCC-----CcCCHHHH
Confidence 345779999999999999889999998876 4999999 5554432 233322110 12244556
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
...++++.+.++.+.+.. +.++++|+|||+||.+++.++.++|+++++++++++..+.... ......++|+++++
T Consensus 121 ~~~~~~~~~~l~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~----~~~~~~~~P~li~~ 195 (251)
T 2r8b_A 121 ERATGKMADFIKANREHY-QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPK----ISPAKPTRRVLITA 195 (251)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCC----CCCCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcc-CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCcccc----ccccccCCcEEEec
Confidence 666666666666554221 6789999999999999999999999999999999998765421 11233578999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
|++|..++.+.++.+.+.+++.+.++++ .+++++|.+..+..+.+.+||.++|..
T Consensus 196 g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~~~~~~~~~~~l~~~l~~ 250 (251)
T 2r8b_A 196 GERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIRSGEIDAVRGFLAAYGGG 250 (251)
T ss_dssp ETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCCHHHHHHHHHHHGGGC--
T ss_pred cCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999987778877 555679999999999999999998863
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=171.23 Aligned_cols=188 Identities=12% Similarity=0.102 Sum_probs=134.9
Q ss_pred CCCCccEEEEEec---CCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHG---LGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+.|+||++|| .+++...|..+++.|++.||.++.+|+++++..+. . .+....+
T Consensus 31 ~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~---------~------------~~~~~~d 89 (277)
T 3bxp_A 31 TAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS---------V------------YPWALQQ 89 (277)
T ss_dssp CCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC---------C------------TTHHHHH
T ss_pred cCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc---------c------------CchHHHH
Confidence 3457899999999 44566677888888888999999999997542110 0 0222345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------------CCCcceEEEeccCCCCcchh--
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------------PRKLGGGAIFSGWVPFNASL-- 175 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------------p~~~~~~i~~~~~~~~~~~~-- 175 (251)
+.++++++.+... +.+++.++++|+|||+||.+++.++.++ +..++++++++|........
T Consensus 90 ~~~~~~~l~~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~ 166 (277)
T 3bxp_A 90 LGATIDWITTQAS---AHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFPT 166 (277)
T ss_dssp HHHHHHHHHHHHH---HHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSSS
T ss_pred HHHHHHHHHhhhh---hcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCCC
Confidence 5555555555444 4567778999999999999999999885 67799999999976432110
Q ss_pred ---------------hhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH--------
Q 025550 176 ---------------IDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------- 232 (251)
Q Consensus 176 ---------------~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------- 232 (251)
..........+|+++++|++|.+++.+.++.+.+.+++.+.+++++++++++|.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~ 246 (277)
T 3bxp_A 167 TSAARNQITTDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQVATAYHLFGSGIHGLALANHVTQKP 246 (277)
T ss_dssp SHHHHHHHCSCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTCCEEEEECCCC--------------
T ss_pred ccccchhccchhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCCeEEEEEeCCCCcccccccccccCc
Confidence 001112335679999999999999999999999999999999999999999996532
Q ss_pred -----------HHHHHHHHHHHHhh
Q 025550 233 -----------EELRNLESWIKTRM 246 (251)
Q Consensus 233 -----------~~~~~~~~~l~~~l 246 (251)
+..+.+.+||.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 247 GKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccchHHHHHHHHHHHHHhcc
Confidence 12566777877654
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=171.44 Aligned_cols=206 Identities=12% Similarity=0.167 Sum_probs=148.5
Q ss_pred eEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC--CCchhhhhhhcCCCcceEEEEccCCCCCCcccCC
Q 025550 9 LFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
....+..++..+..+... |.+++.|+||++||++++. ..|..+++.|.+.||.++.+|+|+++.+..
T Consensus 23 ~~~~~~~~g~~l~~~~~~-------p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~---- 91 (270)
T 3pfb_A 23 ATITLERDGLQLVGTREE-------PFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDG---- 91 (270)
T ss_dssp EEEEEEETTEEEEEEEEE-------CSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSS----
T ss_pred eEEEeccCCEEEEEEEEc-------CCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCC----
Confidence 344556677777776665 2345689999999999874 447778899999999999999998765321
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
........+.++++.++++.+. ...+.++++|+|||+||.+++.++.++|+.++++++++
T Consensus 92 -------------------~~~~~~~~~~~~d~~~~i~~l~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~ 151 (270)
T 3pfb_A 92 -------------------KFENMTVLNEIEDANAILNYVK-TDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLA 151 (270)
T ss_dssp -------------------CGGGCCHHHHHHHHHHHHHHHH-TCTTEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEES
T ss_pred -------------------CCCccCHHHHHHhHHHHHHHHH-hCcCCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEec
Confidence 1122334555666666666553 22344699999999999999999999999999999999
Q ss_pred cCCCCcchhhh-------------------------------------hhcccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 167 GWVPFNASLID-------------------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 167 ~~~~~~~~~~~-------------------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
+.......... .......++|+++++|++|.+++.+.++.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 231 (270)
T 3pfb_A 152 PAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQ 231 (270)
T ss_dssp CCTHHHHHHHHTEETTEECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred cccccchhhhhhhhhccccCcccccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHH
Confidence 86542211000 00013468999999999999999887666555
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
.+ ...+++++++++|.+..+..+.+.+.+.++|...
T Consensus 232 ~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 232 IY----QNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQNN 267 (270)
T ss_dssp HC----SSEEEEEETTCCTTCCTHHHHHHHHHHHHHHC--
T ss_pred hC----CCCeEEEcCCCCcccCccchHHHHHHHHHHHhhc
Confidence 53 3579999999999998777777777777777543
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-25 Score=175.39 Aligned_cols=206 Identities=17% Similarity=0.229 Sum_probs=149.9
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
.....++..+..+... +.+.+.|+||++||++++...|..+++.|.+.||.++.+|+|+.+.+...
T Consensus 39 ~~~~~dg~~l~~~~~~-------p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~------- 104 (342)
T 3hju_A 39 HLVNADGQYLFCRYWK-------PTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGE------- 104 (342)
T ss_dssp EEECTTSCEEEEEEEC-------CSSCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSS-------
T ss_pred eEEccCCeEEEEEEeC-------CCCCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCc-------
Confidence 3444566666655554 23456799999999999999999999999999999999999987654211
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.....+..+.++++.++++.+... .+.++++|+|||+||.+++.++.++|++++++|++++...
T Consensus 105 ---------------~~~~~~~~~~~~d~~~~l~~l~~~-~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 168 (342)
T 3hju_A 105 ---------------RMVVSDFHVFVRDVLQHVDSMQKD-YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVL 168 (342)
T ss_dssp ---------------TTCCSCTHHHHHHHHHHHHHHHHH-STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCS
T ss_pred ---------------CCCcCcHHHHHHHHHHHHHHHHHh-CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccc
Confidence 111223344455555555554322 4567899999999999999999999999999999998755
Q ss_pred Ccchhhhh---------------------------------------------------------------hcccCCCCC
Q 025550 171 FNASLIDQ---------------------------------------------------------------FTSDAKKTP 187 (251)
Q Consensus 171 ~~~~~~~~---------------------------------------------------------------~~~~~~~~p 187 (251)
........ -...++++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 248 (342)
T 3hju_A 169 ANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP 248 (342)
T ss_dssp CCTTTTSHHHHHHHHHHHHHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSC
T ss_pred cchhhhhHHHHHHHHHHHHhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcC
Confidence 43211000 001246899
Q ss_pred EEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-------HHHHHHHHHHHHhhcC
Q 025550 188 ILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------EELRNLESWIKTRMSC 248 (251)
Q Consensus 188 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~~ 248 (251)
+++++|++|.+++.+.++.+.+.+.. ..+++++++++||.+.. +.++.+.+||.+++..
T Consensus 249 vlii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 249 FLLLQGSADRLCDSKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp EEEEEETTCSSSCHHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCcccChHHHHHHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999877777776653 25799999999998763 2357788999888753
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-25 Score=172.41 Aligned_cols=206 Identities=17% Similarity=0.231 Sum_probs=149.4
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
.....++..+..+... +.+++.|+||++||++++...|..+++.|.+.||.++.+|+|+++.+...
T Consensus 21 ~~~~~~g~~l~~~~~~-------~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~------- 86 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWA-------PTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGE------- 86 (303)
T ss_dssp EEECTTSCEEEEEEEC-------CSSCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSS-------
T ss_pred eEecCCCeEEEEEEec-------cCCCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCC-------
Confidence 3445566666665554 23456799999999999999999999999988999999999987654211
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.....+..+.++++.++++.+.. ..+.++++++|||+||.+++.++.++|+.+++++++++...
T Consensus 87 ---------------~~~~~~~~~~~~d~~~~l~~l~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 150 (303)
T 3pe6_A 87 ---------------RMVVSDFHVFVRDVLQHVDSMQK-DYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVL 150 (303)
T ss_dssp ---------------TTCCSSTHHHHHHHHHHHHHHHH-HSTTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSS
T ss_pred ---------------CCCCCCHHHHHHHHHHHHHHHhh-ccCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECcccc
Confidence 11112334445566666655432 13456899999999999999999999999999999998665
Q ss_pred Ccchhhhh---------------------------------------------------------------hcccCCCCC
Q 025550 171 FNASLIDQ---------------------------------------------------------------FTSDAKKTP 187 (251)
Q Consensus 171 ~~~~~~~~---------------------------------------------------------------~~~~~~~~p 187 (251)
........ -...+.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 230 (303)
T 3pe6_A 151 ANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVP 230 (303)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSC
T ss_pred CchhccHHHHHHHHHHHHHhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCC
Confidence 43211000 001246899
Q ss_pred EEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-------HHHHHHHHHHHHhhcC
Q 025550 188 ILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------EELRNLESWIKTRMSC 248 (251)
Q Consensus 188 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~~ 248 (251)
+++++|++|..++.+.++.+.+.+.. ..+++++++++||.+.. +.++.+.+||.+.+..
T Consensus 231 ~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 231 FLLLQGSADRLCDSKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp EEEEEETTCSSBCHHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred EEEEeeCCCCCCChHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999877777776643 25799999999998763 2356788888888753
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=173.88 Aligned_cols=223 Identities=12% Similarity=0.038 Sum_probs=136.7
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGA 88 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 88 (251)
..+..++..+..+++.|. ...+.|+||++||++++.. .+..+++.|+++||.++.+|+|+++.++.......
T Consensus 34 ~~~~~dG~~i~g~l~~P~------~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~ 107 (259)
T 4ao6_A 34 FSLEVDGRTVPGVYWSPA------EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGRE 107 (259)
T ss_dssp EEEEETTEEEEEEEEEES------SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC------------
T ss_pred EEEeeCCeEEEEEEEeCC------CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccc
Confidence 456678889998887642 3346799999999988753 45668889999999999999999876532221110
Q ss_pred cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 89 VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 89 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
....+ ..... .............+.+....++.+ +..++.++|+++|+|+||.+++.++...|+ +++++...++
T Consensus 108 ~~~~~-~~~~~---~~~~~~~~~~~~~~~d~~a~l~~l-~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~ 181 (259)
T 4ao6_A 108 PTDVV-GLDAF---PRMWHEGGGTAAVIADWAAALDFI-EAEEGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMG 181 (259)
T ss_dssp -CCGG-GSTTH---HHHHHHTTHHHHHHHHHHHHHHHH-HHHHCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCC
T ss_pred cchhh-hhhhh---hhhhhhhhhHHHHHHHHHHHHHHh-hhccCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccc
Confidence 00000 00000 000000111222233333444333 223478899999999999999999999985 6666655554
Q ss_pred CCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-HHHHHHHHHHHHhhc
Q 025550 169 VPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-EELRNLESWIKTRMS 247 (251)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~ 247 (251)
..........-...++++|+|+++|++|..+|+++++++++.+.. .+.+++.++|.-|.... +..+.+.+||.++|+
T Consensus 182 ~~~~~~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~--~~k~l~~~~G~H~~~p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 182 VEGVNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT--KQKTLHVNPGKHSAVPTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp TTSTTHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC--SSEEEEEESSCTTCCCHHHHTHHHHHHHHHHCC
T ss_pred cccccccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC--CCeEEEEeCCCCCCcCHHHHHHHHHHHHHHhcC
Confidence 433332222223456889999999999999999999988888754 35789999984344443 446889999999985
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-25 Score=169.46 Aligned_cols=202 Identities=16% Similarity=0.210 Sum_probs=140.9
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
.+..++..+..+...+. ....+.|+||++||++++ ...|..+++.|.+.||.++.+|+|+++.+..
T Consensus 5 ~~~~~g~~l~~~~~~p~-----~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~------- 72 (251)
T 2wtm_A 5 YIDCDGIKLNAYLDMPK-----NNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDG------- 72 (251)
T ss_dssp EEEETTEEEEEEEECCT-----TCCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSS-------
T ss_pred EEecCCcEEEEEEEccC-----CCCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCC-------
Confidence 34567777776655421 112467899999999998 6778889999988999999999998865321
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
.....++.+.++++..+++.+.+. ...++++|+||||||.+++.+|.++|++++++|++++..
T Consensus 73 ----------------~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 135 (251)
T 2wtm_A 73 ----------------KFEDHTLFKWLTNILAVVDYAKKL-DFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAA 135 (251)
T ss_dssp ----------------CGGGCCHHHHHHHHHHHHHHHTTC-TTEEEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCT
T ss_pred ----------------ccccCCHHHHHHHHHHHHHHHHcC-cccceEEEEEECcchHHHHHHHHhCcccceEEEEECcHH
Confidence 001122344455566555543211 123589999999999999999999999999999998853
Q ss_pred CCcch---------------hhhhh-----------------------cccCCCCCEEEEccCCCCcccchhcccchHHH
Q 025550 170 PFNAS---------------LIDQF-----------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFL 211 (251)
Q Consensus 170 ~~~~~---------------~~~~~-----------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l 211 (251)
..... ....+ ...+.++|+++++|++|.+++.+.++.+.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~ 215 (251)
T 2wtm_A 136 MIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY 215 (251)
T ss_dssp THHHHHHHTEETTEECBTTBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred HhHHHHhhhhhccccCCchhcchHHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhC
Confidence 21100 00000 01236899999999999999998777666554
Q ss_pred HhcCCeeEEEEeCCCCCCCCHHH----HHHHHHHHHHhhc
Q 025550 212 EQAGISCEFKAYPGLGHSISNEE----LRNLESWIKTRMS 247 (251)
Q Consensus 212 ~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~ 247 (251)
. +.+++++++++|.. .+. .+.+.+||.+.++
T Consensus 216 ~----~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 216 K----NCKLVTIPGDTHCY-DHHLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp S----SEEEEEETTCCTTC-TTTHHHHHHHHHHHHHHHHC
T ss_pred C----CcEEEEECCCCccc-chhHHHHHHHHHHHHHHhcc
Confidence 2 57899999999998 554 4566777776654
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=169.33 Aligned_cols=205 Identities=15% Similarity=0.156 Sum_probs=147.6
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
+..++..+..++.... +.+.+.|+||++||++++...|..+++.|.+.||.++.+|+|+++.+...
T Consensus 25 ~~~~~~~~~~~~~~~~-----~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--------- 90 (315)
T 4f0j_A 25 FTSQGQPLSMAYLDVA-----PKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKP--------- 90 (315)
T ss_dssp EEETTEEEEEEEEEEC-----CSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC---------
T ss_pred EecCCCCeeEEEeecC-----CCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCC---------
Confidence 3445555554444321 23456799999999999999999999999999999999999987654211
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
.....+..+.++++..+++ .. +.++++|+|||+||.+++.++.++|+.+++++++++.....
T Consensus 91 -------------~~~~~~~~~~~~~~~~~~~---~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 152 (315)
T 4f0j_A 91 -------------AHYQYSFQQLAANTHALLE---RL--GVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLED 152 (315)
T ss_dssp -------------SSCCCCHHHHHHHHHHHHH---HT--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSC
T ss_pred -------------CccccCHHHHHHHHHHHHH---Hh--CCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCC
Confidence 1112345555666666666 32 45689999999999999999999999999999999853211
Q ss_pred chhh----------------------------------------h---------------------------------hh
Q 025550 173 ASLI----------------------------------------D---------------------------------QF 179 (251)
Q Consensus 173 ~~~~----------------------------------------~---------------------------------~~ 179 (251)
.... . ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (315)
T 4f0j_A 153 WKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVY 232 (315)
T ss_dssp HHHHTCCCCCHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGG
T ss_pred cccccchhhhhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhh
Confidence 0000 0 00
Q ss_pred cccCCCCCEEEEccCCCCcccchhc------------ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 180 TSDAKKTPILWSHGMADRTVLFEAG------------QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 180 ~~~~~~~p~l~~~g~~D~~~~~~~~------------~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
...+.++|+++++|++|.+++.+.. ....+.+.+....+++++++++||....+..+.+.+.|.++|.
T Consensus 233 ~l~~~~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 312 (315)
T 4f0j_A 233 ELDRLQMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQ 312 (315)
T ss_dssp GGGGCCSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred hcccCCCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhhCHHHHHHHHHHHhc
Confidence 1134689999999999999985443 3445566655567899999999999888888888888888886
Q ss_pred CC
Q 025550 248 CS 249 (251)
Q Consensus 248 ~~ 249 (251)
..
T Consensus 313 ~~ 314 (315)
T 4f0j_A 313 TQ 314 (315)
T ss_dssp C-
T ss_pred cC
Confidence 54
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=173.58 Aligned_cols=173 Identities=14% Similarity=0.119 Sum_probs=128.6
Q ss_pred CCCCccEEEEEecCCC---CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLGD---SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+.|+||++||++. +...|..+++.|++.||.++.+|+|+.+... .. ......+
T Consensus 46 ~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~---------~~------------~~~~~~d 104 (283)
T 3bjr_A 46 HQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ---------PL------------GLAPVLD 104 (283)
T ss_dssp --CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS---------SC------------BTHHHHH
T ss_pred cCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc---------cC------------chhHHHH
Confidence 3467899999999663 3344777888898999999999999865421 00 0112344
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-------------cceEEEeccCCCCcchh---
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-------------LGGGAIFSGWVPFNASL--- 175 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-------------~~~~i~~~~~~~~~~~~--- 175 (251)
+..+++++.+..+ +.+++.++++|+|||+||.+++.++.++|+. ++++++++|.......+
T Consensus 105 ~~~~~~~l~~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~ 181 (283)
T 3bjr_A 105 LGRAVNLLRQHAA---EWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKD 181 (283)
T ss_dssp HHHHHHHHHHSHH---HHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC---
T ss_pred HHHHHHHHHHHHH---HhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccccc
Confidence 5555555554443 4466778999999999999999999999976 89999999876432110
Q ss_pred --------------hhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 176 --------------IDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 176 --------------~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
..........+|+++++|++|.+++.+.++.+.+.+++.+.+++++++++++|.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 251 (283)
T 3bjr_A 182 DATLATWTPTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKIPYELHVFKHGPHGLA 251 (283)
T ss_dssp -----CCCCCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTCCEEEEEECCCSHHHH
T ss_pred cchHHHHHHHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCCCeEEEEeCCCCcccc
Confidence 00111234678999999999999999999999999999999999999999999664
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-25 Score=169.46 Aligned_cols=207 Identities=12% Similarity=0.064 Sum_probs=141.9
Q ss_pred CCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCc---CCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV---MPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~---~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+||++||++++...|.. +.+.+.+.|+.++.+|+++++.+......... ...|+..... .......
T Consensus 41 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~ 117 (278)
T 3e4d_A 41 HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATE---EPWSEHY 117 (278)
T ss_dssp TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCCS---TTTTTTC
T ss_pred CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCCc---Ccccchh
Confidence 5678999999999998888776 44566667999999999877654221100000 0111111100 0001111
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh--------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL-------------- 175 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~-------------- 175 (251)
.......+++.+.++. ..+++.++++|+|||+||.+++.++.++|+.++++++++|........
T Consensus 118 ~~~~~~~~~~~~~~~~--~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (278)
T 3e4d_A 118 QMYSYVTEELPALIGQ--HFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSADWSEPALEKYLGADR 195 (278)
T ss_dssp BHHHHHHTHHHHHHHH--HSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGCTTTHHHHHHHHCSCG
T ss_pred hHHHHHHHHHHHHHHh--hcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCCccchhhHHHhcCCcH
Confidence 2233333445555553 346666899999999999999999999999999999999976532210
Q ss_pred --------hhhhcccCCCCCEEEEccCCCCcccchh-cccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 176 --------IDQFTSDAKKTPILWSHGMADRTVLFEA-GQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 176 --------~~~~~~~~~~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
..........+|+++++|+.|.+++.+. ++.+.+.+++.|.++++++++|++|.+. .+..+++++|+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~ 275 (278)
T 3e4d_A 196 AAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAE 275 (278)
T ss_dssp GGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSCEEEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCCCceEEEeCCCCcCHHHHHHHHHHHHHHHHH
Confidence 0001112245699999999999998533 6789999999999999999999999864 5668889999998
Q ss_pred hhc
Q 025550 245 RMS 247 (251)
Q Consensus 245 ~l~ 247 (251)
+|+
T Consensus 276 ~l~ 278 (278)
T 3e4d_A 276 RLG 278 (278)
T ss_dssp HHC
T ss_pred hcC
Confidence 874
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=168.12 Aligned_cols=213 Identities=12% Similarity=0.014 Sum_probs=147.3
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
.++..+..++.. |.+.+.|+||++||++++...|..+++.|++.||.++.+|+|+++.+.... +... ..
T Consensus 11 ~~g~~l~~~~~~-------p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~--~~~~--~~ 79 (236)
T 1zi8_A 11 YDGHTFGALVGS-------PAKAPAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTAL--DPQD--ER 79 (236)
T ss_dssp TTSCEECEEEEC-------CSSCSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBC--CTTC--HH
T ss_pred CCCCeEEEEEEC-------CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccc--cccc--hh
Confidence 455666666555 234677999999999998888888999999899999999999775532110 0000 00
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~ 174 (251)
+... .............++++.++++.+.+.....++++++|||+||.+++.++..+| +++++.+++......
T Consensus 80 ~~~~----~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~- 152 (236)
T 1zi8_A 80 QREQ----AYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLEKQ- 152 (236)
T ss_dssp HHHH----HHHHHHHCCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGGGC-
T ss_pred hhhh----hhhhhhccCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccccc-
Confidence 0000 000001112344456666666654321111369999999999999999999998 899998888543211
Q ss_pred hhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH------------HHHHHHHHHH
Q 025550 175 LIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN------------EELRNLESWI 242 (251)
Q Consensus 175 ~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~------------~~~~~~~~~l 242 (251)
.. .....++|+++++|++|..++.+.++.+.+.+++.+ +++++++++++|.+.. +..+.+.+||
T Consensus 153 -~~--~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl 228 (236)
T 1zi8_A 153 -LN--KVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFL 228 (236)
T ss_dssp -GG--GGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHH
T ss_pred -hh--hhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHH
Confidence 11 123467999999999999999999999999887755 7899999999997753 2468899999
Q ss_pred HHhhcCC
Q 025550 243 KTRMSCS 249 (251)
Q Consensus 243 ~~~l~~~ 249 (251)
.++++.+
T Consensus 229 ~~~l~~~ 235 (236)
T 1zi8_A 229 VPLQSRK 235 (236)
T ss_dssp GGGCC--
T ss_pred HHhcCCC
Confidence 9998754
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=172.67 Aligned_cols=203 Identities=16% Similarity=0.109 Sum_probs=151.0
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+..++..+..++..+ . +.|+||++||++++...|..+++.|.+.||.++.+|+|+++.+..
T Consensus 9 ~~~~~~g~~l~~~~~~p-------~--~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~-------- 71 (290)
T 3ksr_A 9 IEIPVGQDELSGTLLTP-------T--GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYAS-------- 71 (290)
T ss_dssp EEEEETTEEEEEEEEEE-------E--SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGG--------
T ss_pred EEecCCCeEEEEEEecC-------C--CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCC--------
Confidence 34455677777766652 2 779999999999999999999999999999999999997754321
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
........+.++++.++++.+. +.+++.++++|+|||+||.+++.++.++| +++++++++..
T Consensus 72 ---------------~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~ 134 (290)
T 3ksr_A 72 ---------------MRQSVTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPAL 134 (290)
T ss_dssp ---------------GTTTCBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCC
T ss_pred ---------------CcccccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcch
Confidence 1111234455666666666554 33456679999999999999999999988 78888888765
Q ss_pred CCcchhh------h------h--------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 170 PFNASLI------D------Q--------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 170 ~~~~~~~------~------~--------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
.....+. . . ......++|+++++|++|.+++.+.++.+.+.+...+ +++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~ 213 (290)
T 3ksr_A 135 YKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVI 213 (290)
T ss_dssp CCSSCTTSBHHHHHHSTTHHHHTTSCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEE
T ss_pred hhhhhhhcccccccCChhhhhhhhhhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEc
Confidence 4321110 0 0 0012478899999999999999998888888887765 7899999
Q ss_pred CCCCCCCCHH-----HHHHHHHHHHHhhcC
Q 025550 224 PGLGHSISNE-----ELRNLESWIKTRMSC 248 (251)
Q Consensus 224 ~g~~H~~~~~-----~~~~~~~~l~~~l~~ 248 (251)
++++|.+..+ ..+.+.+||.+.+..
T Consensus 214 ~~~gH~~~~~~~~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 214 AGADHALSVKEHQQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp TTCCTTCCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHhcC
Confidence 9999987532 246788999888753
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=173.86 Aligned_cols=183 Identities=18% Similarity=0.288 Sum_probs=136.7
Q ss_pred CccEEEEEecCC---CCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLG---DSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~---~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..|+||++||+| ++...|..+++.+++ .|+.++.+||++++..+. +....++.
T Consensus 86 ~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~~-----------------------~~~~~D~~ 142 (326)
T 3ga7_A 86 SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARY-----------------------PQAIEETV 142 (326)
T ss_dssp CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSCT-----------------------THHHHHHH
T ss_pred CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCCC-----------------------CcHHHHHH
Confidence 349999999998 778888888888877 799999999997654310 22234444
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC------cceEEEeccCCCCcchhhh----------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK------LGGGAIFSGWVPFNASLID---------- 177 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~------~~~~i~~~~~~~~~~~~~~---------- 177 (251)
++++++.+... ..+++.++|+|+|+|+||.+++.++.+.++. +++++++++..........
T Consensus 143 ~a~~~l~~~~~---~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~l 219 (326)
T 3ga7_A 143 AVCSYFSQHAD---EYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFGGAWDGL 219 (326)
T ss_dssp HHHHHHHHTTT---TTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHHHHHCCCTTTTC
T ss_pred HHHHHHHHhHH---HhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChhHhhhcCCCCCC
Confidence 44444443322 4577889999999999999999999887653 8899999886543211000
Q ss_pred ----------hh-----------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 178 ----------QF-----------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 178 ----------~~-----------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.+ ......+|+++++|+.|.++ +.++.+++.+++.|.++++++++|++|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~f 297 (326)
T 3ga7_A 220 TREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLLHQTLQAHQQPCEYKMYPGTLHAF 297 (326)
T ss_dssp CHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTG
T ss_pred CHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHHHHHHHHCCCcEEEEEeCCCccch
Confidence 00 00124569999999999987 47788999999999999999999999987
Q ss_pred C---------HHHHHHHHHHHHHhhcC
Q 025550 231 S---------NEELRNLESWIKTRMSC 248 (251)
Q Consensus 231 ~---------~~~~~~~~~~l~~~l~~ 248 (251)
. .+..+.+.+||.++++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 298 LHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp GGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 3 34578899999998864
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=167.00 Aligned_cols=205 Identities=14% Similarity=0.105 Sum_probs=139.9
Q ss_pred CCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccC---CCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCN---YGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+||++||++++...|.. +.+.+.+.|+.++.+|.++.+....... .|. ...|+..... .......
T Consensus 44 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~-g~~~~~~~~~---~~~~~~~ 119 (280)
T 3i6y_A 44 GAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ-GAGFYVNATQ---APWNRHY 119 (280)
T ss_dssp TCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST-TCCTTCBCCS---TTGGGTC
T ss_pred CCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCccccccccc-CccccccccC---CCccchh
Confidence 5678999999999998888766 4456667799999999876544211100 000 0111111100 0000011
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------- 176 (251)
.......+++...++. ...+ .++++|+|||+||.+++.++.++|+.++++++++|.........
T Consensus 120 ~~~~~~~~~~~~~~~~--~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~ 196 (280)
T 3i6y_A 120 QMYDYVVNELPELIES--MFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDT 196 (280)
T ss_dssp BHHHHHHTHHHHHHHH--HSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSHHHHHHHHHHHCSCG
T ss_pred hHHHHHHHHHHHHHHH--hCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCchHHHHHHHhcCCch
Confidence 1223334555555543 2333 57999999999999999999999999999999999765432110
Q ss_pred ---------hhhcccCCCCCEEEEccCCCCcccchh-cccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 177 ---------DQFTSDAKKTPILWSHGMADRTVLFEA-GQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 177 ---------~~~~~~~~~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
.........+|+++++|+.|.+++.+. ++.+.+.+++.|.++++++++|++|.+. .+.+++..+|+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~l~~~~~ 276 (280)
T 3i6y_A 197 DTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNYPLELRSHEGYDHSYYFIASFIEDHLRFHSN 276 (280)
T ss_dssp GGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCCCceEEEeCCCCccHHHHHHhHHHHHHHHHh
Confidence 000111125899999999999998754 7789999999999999999999999864 4668899999999
Q ss_pred hhc
Q 025550 245 RMS 247 (251)
Q Consensus 245 ~l~ 247 (251)
+|+
T Consensus 277 ~l~ 279 (280)
T 3i6y_A 277 YLN 279 (280)
T ss_dssp HHT
T ss_pred hcc
Confidence 885
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-24 Score=173.69 Aligned_cols=185 Identities=16% Similarity=0.181 Sum_probs=133.7
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..+.|+||++||++++. +..++..|+++||.++++|+++.+..+... .....+++.++
T Consensus 155 ~~~~P~Vv~~hG~~~~~--~~~~a~~La~~Gy~V~a~D~rG~g~~~~~~--------------------~~~~~~d~~~~ 212 (422)
T 3k2i_A 155 PGPFPGIIDIFGIGGGL--LEYRASLLAGHGFATLALAYYNFEDLPNNM--------------------DNISLEYFEEA 212 (422)
T ss_dssp SCCBCEEEEECCTTCSC--CCHHHHHHHTTTCEEEEEECSSSTTSCSSC--------------------SCEETHHHHHH
T ss_pred CCCcCEEEEEcCCCcch--hHHHHHHHHhCCCEEEEEccCCCCCCCCCc--------------------ccCCHHHHHHH
Confidence 45679999999987763 445688899999999999999865432110 01123444444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch---------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------------------- 174 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------------------- 174 (251)
++++.+ ...++.++++|+|||+||.+++.++.++|+ ++++|++++.......
T Consensus 213 ~~~l~~------~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (422)
T 3k2i_A 213 VCYMLQ------HPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKV 285 (422)
T ss_dssp HHHHHT------STTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEE
T ss_pred HHHHHh------CcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhccc
Confidence 444322 345577899999999999999999999997 9999998876521100
Q ss_pred ---------------h-----hhhhcccCCCCCEEEEccCCCCcccchhc-ccchHHHHhcCCe-eEEEEeCCCCCCC--
Q 025550 175 ---------------L-----IDQFTSDAKKTPILWSHGMADRTVLFEAG-QAGPPFLEQAGIS-CEFKAYPGLGHSI-- 230 (251)
Q Consensus 175 ---------------~-----~~~~~~~~~~~p~l~~~g~~D~~~~~~~~-~~~~~~l~~~~~~-~~~~~~~g~~H~~-- 230 (251)
. .......++++|+|+++|++|.+++.+.. +.+.+.+++.+.+ +++++++|++|.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~ 365 (422)
T 3k2i_A 286 AFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEP 365 (422)
T ss_dssp CTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCS
T ss_pred CcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECC
Confidence 0 00001234789999999999999998755 6888899998888 9999999999997
Q ss_pred ------------------------------CHHHHHHHHHHHHHhhcCC
Q 025550 231 ------------------------------SNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 231 ------------------------------~~~~~~~~~~~l~~~l~~~ 249 (251)
..+.++.+.+||.++|+.+
T Consensus 366 p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 366 PYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp TTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 1234788999999999754
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=159.52 Aligned_cols=190 Identities=13% Similarity=0.122 Sum_probs=131.5
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCC---C--CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLG---D--SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGA 88 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~---~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 88 (251)
..++ .+..+...+ +..++.|+||++||++ + +...|..+++.+.+.||.++.+|+|+.+.+...
T Consensus 13 ~~~g-~l~~~~~~p------~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~----- 80 (208)
T 3trd_A 13 GPVG-QLEVMITRP------KGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR----- 80 (208)
T ss_dssp CSSS-EEEEEEECC------SSCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC-----
T ss_pred CCCc-eEEEEEEcC------CCCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC-----
Confidence 3344 666666652 1234779999999942 2 333466788899999999999999987653211
Q ss_pred cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 89 VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 89 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
+ ..... ..+++.++++.+... .+.++++++|||+||.+++.++ .+| .+++++++++.
T Consensus 81 ----~-------------~~~~~---~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~ 137 (208)
T 3trd_A 81 ----Y-------------DNGVG---EVEDLKAVLRWVEHH-WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPP 137 (208)
T ss_dssp ----C-------------CTTTH---HHHHHHHHHHHHHHH-CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCC
T ss_pred ----c-------------cchHH---HHHHHHHHHHHHHHh-CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccc
Confidence 0 01111 123333333333222 3458999999999999999999 777 79999999987
Q ss_pred CCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 169 VPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
...... ......++|+++++|++|..++.+.++.+.+.+.. .++++++++++|.+..+. +++.+++.++|
T Consensus 138 ~~~~~~----~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl 207 (208)
T 3trd_A 138 VFYEGF----ASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS---PVEFVVMSGASHFFHGRL-IELRELLVRNL 207 (208)
T ss_dssp TTSGGG----TTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS---CCEEEEETTCCSSCTTCH-HHHHHHHHHHH
T ss_pred cccCCc----hhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC---ceEEEEeCCCCCcccccH-HHHHHHHHHHh
Confidence 743321 12233579999999999999999876666665544 379999999999987654 77777777765
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=183.96 Aligned_cols=208 Identities=15% Similarity=0.152 Sum_probs=149.2
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
.++..+..++..|+. ..++.|+||++||++.. ...|..+++.|+++||.++.+|+|+++.. | ..
T Consensus 341 ~~g~~i~~~~~~p~~-----~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~------G---~s 406 (582)
T 3o4h_A 341 FDGSRVPTYVLESGR-----APTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGY------G---EE 406 (582)
T ss_dssp TTSCEEEEEEEEETT-----SCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSS------C---HH
T ss_pred CCCCEEEEEEEcCCC-----CCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCC------c---hh
Confidence 355566666655322 23378999999997765 67788899999999999999999975432 1 11
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
|..... .......+ +++.+.++.+. +..++ +++|+|||+||.+++.++.++|+.++++++++|....
T Consensus 407 ~~~~~~------~~~~~~~~----~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~ 474 (582)
T 3o4h_A 407 WRLKII------GDPCGGEL----EDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDW 474 (582)
T ss_dssp HHHTTT------TCTTTHHH----HHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCH
T ss_pred HHhhhh------hhcccccH----HHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCH
Confidence 211100 01112222 33333333333 32334 9999999999999999999999999999999996553
Q ss_pred cchhh-------------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 172 NASLI-------------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 172 ~~~~~-------------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
..... ......+.++|+|+++|++|..++++.++.+++.+++.+.++++++++++
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~~~ 554 (582)
T 3o4h_A 475 EEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGKTFEAHIIPDA 554 (582)
T ss_dssp HHHHHTCCHHHHHHHHHHTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred HHHhhcccchhHHHHHHHcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 21110 00112347899999999999999999999999999999999999999999
Q ss_pred CCCCC-H----HHHHHHHHHHHHhhcC
Q 025550 227 GHSIS-N----EELRNLESWIKTRMSC 248 (251)
Q Consensus 227 ~H~~~-~----~~~~~~~~~l~~~l~~ 248 (251)
+|.+. . +..+.+.+||.++|+.
T Consensus 555 gH~~~~~~~~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 555 GHAINTMEDAVKILLPAVFFLATQRER 581 (582)
T ss_dssp CSSCCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHcCC
Confidence 99986 2 3368899999999864
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-26 Score=176.56 Aligned_cols=179 Identities=16% Similarity=0.113 Sum_probs=139.1
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.|++.||.++.+|+++.+.++ .....++...++
T Consensus 95 ~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~------------------------~~~~~d~~~~~~ 150 (306)
T 3vis_A 95 TYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQP------------------------DSRARQLNAALD 150 (306)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCH------------------------HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCc------------------------chHHHHHHHHHH
Confidence 67999999999999989999999999999999999999764421 011233444444
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADR 197 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~ 197 (251)
++...........++.++++++|||+||.+++.++.++|+ ++++++++++..... ....++|+++++|++|.
T Consensus 151 ~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~~~-------~~~~~~P~lii~G~~D~ 222 (306)
T 3vis_A 151 YMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLNKS-------WRDITVPTLIIGAEYDT 222 (306)
T ss_dssp HHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSCCC-------CTTCCSCEEEEEETTCS
T ss_pred HHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCccc-------cccCCCCEEEEecCCCc
Confidence 4443200011245677899999999999999999999997 999999999765321 23467999999999999
Q ss_pred cccch-hcccchHHHHhcCCeeEEEEeCCCCCCCCH----HHHHHHHHHHHHhhcCC
Q 025550 198 TVLFE-AGQAGPPFLEQAGISCEFKAYPGLGHSISN----EELRNLESWIKTRMSCS 249 (251)
Q Consensus 198 ~~~~~-~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~l~~~ 249 (251)
+++.+ .++.+++.++..+ ++++++++|++|.+.. +..+.+.+||.++++..
T Consensus 223 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 223 IASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNITNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp SSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred ccCcchhHHHHHHHhccCC-CceEEEECCCCccchhhchhHHHHHHHHHHHHHccCc
Confidence 99998 5888888887765 7899999999998753 35788999999998754
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-24 Score=164.87 Aligned_cols=205 Identities=15% Similarity=0.104 Sum_probs=138.8
Q ss_pred CCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccC---CCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCN---YGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+||++||++++...|.. +.+.+.+.|+.++.+|.++.+....... .|. ...|+..... .......
T Consensus 42 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~-g~~~~~~~~~---~~~~~~~ 117 (280)
T 3ls2_A 42 SNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQ-GAGFYVNATQ---APYNTHF 117 (280)
T ss_dssp TBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSST-TCCTTCBCCS---TTTTTTC
T ss_pred CCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCccccccccccccccccc-CCcccccccc---ccccccc
Confidence 5678999999999988877655 4556667799999888765443211100 010 1122221110 0001111
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------- 176 (251)
.......+++...++. ...+ .++++|+|||+||.+++.++.++|+.++++++++|.........
T Consensus 118 ~~~~~~~~~~~~~i~~--~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~ 194 (280)
T 3ls2_A 118 NMYDYVVNELPALIEQ--HFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCPWGVKAFTGYLGADK 194 (280)
T ss_dssp BHHHHHHTHHHHHHHH--HSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSHHHHHHHHHHHCSCG
T ss_pred cHHHHHHHHHHHHHHh--hCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCcchhhHHHhhcCchH
Confidence 2223334455555553 2233 37999999999999999999999999999999999765432100
Q ss_pred ---------hhhcccCC--CCCEEEEccCCCCcccchh-cccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 177 ---------DQFTSDAK--KTPILWSHGMADRTVLFEA-GQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 177 ---------~~~~~~~~--~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
........ .+|+++++|+.|.+++.+. ++.+.+.+++.+.++++++++|++|.+. ...+++.++|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 274 (280)
T 3ls2_A 195 TTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDYPLTLEMQTGYDHSYFFISSFIDQHLVFH 274 (280)
T ss_dssp GGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTCCEEEEEETTCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCCCceEEEeCCCCCchhhHHHHHHHHHHHH
Confidence 00011111 6799999999999999754 6789999999999999999999999864 46688999999
Q ss_pred HHhhc
Q 025550 243 KTRMS 247 (251)
Q Consensus 243 ~~~l~ 247 (251)
.++|+
T Consensus 275 ~~~l~ 279 (280)
T 3ls2_A 275 HQYLS 279 (280)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99885
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-24 Score=174.03 Aligned_cols=185 Identities=17% Similarity=0.212 Sum_probs=132.8
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..+.|+||++||+++... ...++.|+++||.++++|+++.+..+... .....+++.++
T Consensus 171 ~~~~P~Vv~lhG~~~~~~--~~~a~~La~~Gy~Vla~D~rG~~~~~~~~--------------------~~~~~~d~~~a 228 (446)
T 3hlk_A 171 PGPFPGIVDMFGTGGGLL--EYRASLLAGKGFAVMALAYYNYEDLPKTM--------------------ETLHLEYFEEA 228 (446)
T ss_dssp SCCBCEEEEECCSSCSCC--CHHHHHHHTTTCEEEEECCSSSTTSCSCC--------------------SEEEHHHHHHH
T ss_pred CCCCCEEEEECCCCcchh--hHHHHHHHhCCCEEEEeccCCCCCCCcch--------------------hhCCHHHHHHH
Confidence 456799999999887543 34578899999999999999865432110 00122333333
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh--------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL-------------------- 175 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~-------------------- 175 (251)
++++.+ ...++.++++|+|||+||.+++.++..+|+ ++++|+++|........
T Consensus 229 ~~~l~~------~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (446)
T 3hlk_A 229 MNYLLS------HPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKV 301 (446)
T ss_dssp HHHHHT------STTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEE
T ss_pred HHHHHh------CCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccc
Confidence 333322 445677899999999999999999999997 89999888854211000
Q ss_pred ---------------------hhhhcccCCCCCEEEEccCCCCcccchh-cccchHHHHhcCCe-eEEEEeCCCCCCC--
Q 025550 176 ---------------------IDQFTSDAKKTPILWSHGMADRTVLFEA-GQAGPPFLEQAGIS-CEFKAYPGLGHSI-- 230 (251)
Q Consensus 176 ---------------------~~~~~~~~~~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~~~~-~~~~~~~g~~H~~-- 230 (251)
.......+.++|+|+++|++|.+++.+. ++.+.+.+++.+.+ +++++|+|++|.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~ 381 (446)
T 3hlk_A 302 TKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381 (446)
T ss_dssp CSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCS
T ss_pred ccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECC
Confidence 0000123477999999999999999844 46889999999888 8999999999988
Q ss_pred ------------------------------CHHHHHHHHHHHHHhhcCC
Q 025550 231 ------------------------------SNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 231 ------------------------------~~~~~~~~~~~l~~~l~~~ 249 (251)
..+.++.+.+||.++|...
T Consensus 382 p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 382 PYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp TTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 2334788999999999754
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=169.12 Aligned_cols=179 Identities=17% Similarity=0.173 Sum_probs=136.1
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+.+.|+||++||++++...|..+++.|++.||.++.+|+++.+..+ .....++...
T Consensus 51 ~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~------------------------~~~~~d~~~~ 106 (262)
T 1jfr_A 51 DGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP------------------------DSRGRQLLSA 106 (262)
T ss_dssp TCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH------------------------HHHHHHHHHH
T ss_pred CCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCC------------------------chhHHHHHHH
Confidence 4567999999999999999999999999999999999998654311 0011233333
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMA 195 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~ 195 (251)
++++.+. . .....++.++++|+|||+||.+++.++.++|+ ++++++++++.... .....++|+++++|++
T Consensus 107 ~~~l~~~-~-~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~~~-------~~~~~~~P~l~i~G~~ 176 (262)
T 1jfr_A 107 LDYLTQR-S-SVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNTDK-------TWPELRTPTLVVGADG 176 (262)
T ss_dssp HHHHHHT-S-TTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSCC-------CCTTCCSCEEEEEETT
T ss_pred HHHHHhc-c-ccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCccc-------cccccCCCEEEEecCc
Confidence 3333321 0 00123466799999999999999999999997 99999999876421 1234689999999999
Q ss_pred CCcccchh-cccchHHHHhcCCeeEEEEeCCCCCCCCH----HHHHHHHHHHHHhhcCC
Q 025550 196 DRTVLFEA-GQAGPPFLEQAGISCEFKAYPGLGHSISN----EELRNLESWIKTRMSCS 249 (251)
Q Consensus 196 D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~l~~~ 249 (251)
|.+++.+. ++.+.+.+.. +.+++++++++++|.+.. +..+.+.+||.++++..
T Consensus 177 D~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 177 DTVAPVATHSKPFYESLPG-SLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp CSSSCTTTTHHHHHHHSCT-TSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred cccCCchhhHHHHHHHhhc-CCCceEEEeCCCCcCCcccchHHHHHHHHHHHHHHhcCc
Confidence 99999997 8888888743 457899999999998753 44788999999998743
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-24 Score=166.15 Aligned_cols=205 Identities=13% Similarity=0.075 Sum_probs=137.1
Q ss_pred CCccEEEEEecCCCCCCCchhh---hhhhcCCCcceEEEEc--cCCCCCCcccC--CCCcCCccccccCCCCCCCCCCCh
Q 025550 37 MARNFILWLHGLGDSGPANEPI---KTLFTSPEFKLTKWSF--PSAPNNPVTCN--YGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~---~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
++.|+||++||++++...|... .+.+++.|+.++.+|+ ++.+....... .|. ...++..... .......
T Consensus 43 ~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~-~~~~~~~~~~---~~~~~~~ 118 (282)
T 3fcx_A 43 GKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGT-GAGFYVDATE---DPWKTNY 118 (282)
T ss_dssp SCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCC-CCCTTCBCCS---TTHHHHC
T ss_pred CCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccC-CcccccccCc---ccccchh
Confidence 5789999999999988777664 5677788999999998 44332110000 000 0111111100 0000000
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------- 176 (251)
.......+.+...++. ..+++.++++|+|||+||.+++.++.++|+.++++++++|.........
T Consensus 119 ~~~~~~~~~~~~~~~~--~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~ 196 (282)
T 3fcx_A 119 RMYSYVTEELPQLINA--NFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQ 196 (282)
T ss_dssp BHHHHHHTHHHHHHHH--HSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGSHHHHHHHHHHHC---
T ss_pred hHHHHHHHHHHHHHHH--HcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccCchhHHHHHHhcCCch
Confidence 2233334455555443 4556778999999999999999999999999999999999765322110
Q ss_pred ---------hhh-cccCCCCCEEEEccCCCCcccchh--cccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 177 ---------DQF-TSDAKKTPILWSHGMADRTVLFEA--GQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 177 ---------~~~-~~~~~~~p~l~~~g~~D~~~~~~~--~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
... ......+|+++++|++|.+++... ++.+.+.+++.+.++++++++|++|.+. ...+++.++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 276 (282)
T 3fcx_A 197 SKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSYYFIATFITDHIRHH 276 (282)
T ss_dssp CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSHHHHHHHHHHHHHHH
T ss_pred hhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCHHHHHhhhHHHHHHH
Confidence 000 011247999999999999987655 3478999999999999999999999875 45678889999
Q ss_pred HHhhc
Q 025550 243 KTRMS 247 (251)
Q Consensus 243 ~~~l~ 247 (251)
.++|+
T Consensus 277 ~~~l~ 281 (282)
T 3fcx_A 277 AKYLN 281 (282)
T ss_dssp HHHTT
T ss_pred HHhhc
Confidence 98875
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=160.67 Aligned_cols=200 Identities=16% Similarity=0.111 Sum_probs=143.7
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCc--hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPAN--EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
.+..++..+..++..+ . .+.|+||++||++++...| ..+++.|++.||.++.+|+|+.+.+...
T Consensus 16 ~~~~~g~~l~~~~~~p-------~-~~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~------ 81 (223)
T 2o2g_A 16 SVSVGEVKLKGNLVIP-------N-GATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEID------ 81 (223)
T ss_dssp EEEETTEEEEEEEECC-------T-TCCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHH------
T ss_pred EEecCCeEEEEEEecC-------C-CCceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCcc------
Confidence 3345777777666652 2 2579999999999888754 4578888888999999999965332100
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
... .....+..+.++++.++++.+. +..++.++++++|||+||.+++.++.++|+.+++++++++.
T Consensus 82 ---~~~----------~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 148 (223)
T 2o2g_A 82 ---LRT----------RHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGR 148 (223)
T ss_dssp ---HHH----------CSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred ---chh----------hcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCC
Confidence 000 0001233444556666666554 44567789999999999999999999999999999999987
Q ss_pred CCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH-----HHHHHHHHHH
Q 025550 169 VPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE-----ELRNLESWIK 243 (251)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~ 243 (251)
....... ....++|+++++|++|..++.+ ..+.+++.+.+++++.+++++|.+..+ ..+.+.+||.
T Consensus 149 ~~~~~~~-----~~~~~~P~l~i~g~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~ 219 (223)
T 2o2g_A 149 PDLAPSA-----LPHVKAPTLLIVGGYDLPVIAM----NEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFM 219 (223)
T ss_dssp GGGCTTT-----GGGCCSCEEEEEETTCHHHHHH----HHHHHHHCCSSEEEEEETTCCTTCCSTTHHHHHHHHHHHHHH
T ss_pred CCcCHHH-----HhcCCCCEEEEEccccCCCCHH----HHHHHHhhCCCeEEEEeCCCCcccCChHHHHHHHHHHHHHHH
Confidence 6543221 2345799999999999998743 356667767789999999999987642 3677888888
Q ss_pred Hhhc
Q 025550 244 TRMS 247 (251)
Q Consensus 244 ~~l~ 247 (251)
++|+
T Consensus 220 ~~l~ 223 (223)
T 2o2g_A 220 HYLR 223 (223)
T ss_dssp HHCC
T ss_pred HhcC
Confidence 8764
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-23 Score=179.12 Aligned_cols=216 Identities=14% Similarity=0.134 Sum_probs=152.4
Q ss_pred ecceEEEEEecCCCCCC-CCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCC
Q 025550 15 SGTIIFILFFWPSSSYS-HEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMP 91 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (251)
.++..+..++..|.... ..+.+++.|+||++||++.+.. .|..+++.|+++||.++.+|+|+.+.. | .
T Consensus 399 ~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~------G---~ 469 (662)
T 3azo_A 399 PDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGY------G---R 469 (662)
T ss_dssp TTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSS------C---H
T ss_pred CCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCc------c---H
Confidence 35667777766643321 0113457899999999976554 777888899999999999999985432 1 1
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
.|..... ......++.+..+.+..+++ +..++.++++|+|||+||.+++.++.. |++++++++++|....
T Consensus 470 ~~~~~~~------~~~~~~~~~d~~~~~~~l~~---~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~ 539 (662)
T 3azo_A 470 AYRERLR------GRWGVVDVEDCAAVATALAE---EGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDL 539 (662)
T ss_dssp HHHHTTT------TTTTTHHHHHHHHHHHHHHH---TTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCH
T ss_pred HHHHhhc------cccccccHHHHHHHHHHHHH---cCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCH
Confidence 2211100 01112333333444433333 444788899999999999999988876 8899999999986542
Q ss_pred cchhh----------------------h-------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 172 NASLI----------------------D-------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 172 ~~~~~----------------------~-------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
..... . .....+.++|+|+++|++|..+++++++++++.+++.+.++++++
T Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 619 (662)
T 3azo_A 540 LGWADGGTHDFESRYLDFLIGSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLS 619 (662)
T ss_dssp HHHHTTCSCGGGTTHHHHHTCCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEE
T ss_pred HHHhcccccchhhHhHHHHhCCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 11100 0 001234679999999999999999999999999999999999999
Q ss_pred eCCCCCCCC-----HHHHHHHHHHHHHhhcCC
Q 025550 223 YPGLGHSIS-----NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 223 ~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 249 (251)
+++++|.+. .+..+.+.+||.++|+..
T Consensus 620 ~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~~ 651 (662)
T 3azo_A 620 FEGEGHGFRRKETMVRALEAELSLYAQVFGVE 651 (662)
T ss_dssp ETTCCSSCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCCCCChHHHHHHHHHHHHHHHHHhCCC
Confidence 999999875 234688999999998754
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=168.99 Aligned_cols=204 Identities=17% Similarity=0.224 Sum_probs=142.3
Q ss_pred cceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh----------hhh--hhcCCCcceEEEEccCCCCCCcc
Q 025550 16 GTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP----------IKT--LFTSPEFKLTKWSFPSAPNNPVT 83 (251)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~----------~~~--~~~~~g~~~~~~~~~~~~~~~~~ 83 (251)
++..+..++..|..+. ..++.|+||++||++++...+.. ++. .....++.++.+++++....
T Consensus 154 dg~~l~~~v~~P~~~~---~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~--- 227 (380)
T 3doh_A 154 TGVEIPYRLFVPKDVN---PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW--- 227 (380)
T ss_dssp TCCEEEEEEECCSSCC---TTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS---
T ss_pred CCcEEEEEEEcCCCCC---CCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc---
Confidence 4456655555543322 35678999999999876544211 111 23356677888887753221
Q ss_pred cCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEE
Q 025550 84 CNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGA 163 (251)
Q Consensus 84 ~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i 163 (251)
...|.+... ......+..+..+.+..+++ +.+++.++++|+|||+||.+++.++.++|+.+++++
T Consensus 228 ------~~~~~~~~~------~~~~~~~~~d~~~~i~~~~~---~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v 292 (380)
T 3doh_A 228 ------STLFTDREN------PFNPEKPLLAVIKIIRKLLD---EYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAI 292 (380)
T ss_dssp ------BTTTTCSSC------TTSBCHHHHHHHHHHHHHHH---HSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEE
T ss_pred ------ccccccccc------ccCCcchHHHHHHHHHHHHH---hcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEE
Confidence 122322111 11123444445555555444 667788899999999999999999999999999999
Q ss_pred EeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC--------CCCCCHHHH
Q 025550 164 IFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL--------GHSISNEEL 235 (251)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~--------~H~~~~~~~ 235 (251)
+++|....... .....+|+++++|+.|..++++.++.+.+.|++.+.++++++++++ +|....+..
T Consensus 293 ~~sg~~~~~~~------~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~h~~h~~~~H~~~~~~~ 366 (380)
T 3doh_A 293 PICGGGDVSKV------ERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRYTEYEKGFMEKHGWDPHGSWIPTY 366 (380)
T ss_dssp EESCCCCGGGG------GGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEECTTHHHHTTCCTTCTHHHHH
T ss_pred EecCCCChhhh------hhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEEEEecCCcccCCCCCCchhHHHhc
Confidence 99998632211 1123489999999999999999999999999999999999999999 787666666
Q ss_pred H--HHHHHHHHhh
Q 025550 236 R--NLESWIKTRM 246 (251)
Q Consensus 236 ~--~~~~~l~~~l 246 (251)
. .+.+||.++.
T Consensus 367 ~~~~i~~wL~~~~ 379 (380)
T 3doh_A 367 ENQEAIEWLFEQS 379 (380)
T ss_dssp TCHHHHHHHHTCC
T ss_pred CCHHHHHHHHhhc
Confidence 5 8999998753
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=166.23 Aligned_cols=178 Identities=19% Similarity=0.281 Sum_probs=130.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...|+|||+||++++...|..+.+.|. .+|.++.+|+||++.+... .....++.+.+
T Consensus 13 ~~~~~vvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~----------------------~~~~~~~~~~a 69 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGSYWLPQLAVLE-QEYQVVCYDQRGTGNNPDT----------------------LAEDYSIAQMA 69 (268)
T ss_dssp TTCCEEEEECCTTCCGGGGHHHHHHHH-TTSEEEECCCTTBTTBCCC----------------------CCTTCCHHHHH
T ss_pred CCCCEEEEeCCCCccHHHHHHHHHHHh-hcCeEEEECCCCCCCCCCC----------------------ccccCCHHHHH
Confidence 456899999999999999999999886 4699999999988654211 11123456667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh---------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL--------------------- 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~--------------------- 175 (251)
+++.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|+++++.......
T Consensus 70 ~dl~~~l~---~l~--~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (268)
T 3v48_A 70 AELHQALV---AAG--IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVE 144 (268)
T ss_dssp HHHHHHHH---HTT--CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HcC--CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhh
Confidence 77777776 333 4589999999999999999999999999999998754321100
Q ss_pred -----------hh----h-------------------------------hcccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 176 -----------ID----Q-------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 176 -----------~~----~-------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
.. . -....+++|+++++|++|..++.+.++.+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~ 224 (268)
T 3v48_A 145 AQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHA 224 (268)
T ss_dssp HHHHHHSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHH
T ss_pred hhhhhcCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHH
Confidence 00 0 0012478999999999999999887666655
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
.+. ..++++++++||....+..+.+.+.|.++|
T Consensus 225 ~~p----~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl 257 (268)
T 3v48_A 225 ALP----DSQKMVMPYGGHACNVTDPETFNALLLNGL 257 (268)
T ss_dssp HCS----SEEEEEESSCCTTHHHHCHHHHHHHHHHHH
T ss_pred hCC----cCeEEEeCCCCcchhhcCHHHHHHHHHHHH
Confidence 553 368899999999987666555554444444
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=154.83 Aligned_cols=195 Identities=13% Similarity=0.140 Sum_probs=140.4
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
.+..++..+......+ . .+.|+||++||++++...|.. +++.+.+.|+.++.+|+|+.+.+...
T Consensus 8 ~~~~~g~~l~~~~~~~-------~-~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~------ 73 (207)
T 3bdi_A 8 FIDVNGTRVFQRKMVT-------D-SNRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASS------ 73 (207)
T ss_dssp EEEETTEEEEEEEECC-------T-TCCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCC------
T ss_pred EEeeCCcEEEEEEEec-------c-CCCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCcc------
Confidence 3445666665543331 1 256899999999999999999 99999999999999999976542100
Q ss_pred CCccccccCCCCCCCCCCChh-HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDES-SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
. ...... +..+.++.+..+++ .. +.++++++|||+||.+++.++.++|+.+++++++++.
T Consensus 74 ~--------------~~~~~~~~~~~~~~~~~~~~~---~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~ 134 (207)
T 3bdi_A 74 E--------------KYGIDRGDLKHAAEFIRDYLK---AN--GVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPA 134 (207)
T ss_dssp T--------------TTCCTTCCHHHHHHHHHHHHH---HT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred c--------------CCCCCcchHHHHHHHHHHHHH---Hc--CCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCc
Confidence 0 011112 45555666666665 32 4569999999999999999999999999999999987
Q ss_pred CCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 169 VPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.... .... ....++|+++++|++|..++.+.++.+.+.+. +++++.+++++|.+..+..+.+.+.+.+++.
T Consensus 135 ~~~~--~~~~--~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~ 205 (207)
T 3bdi_A 135 WVES--LKGD--MKKIRQKTLLVWGSKDHVVPIALSKEYASIIS----GSRLEIVEGSGHPVYIEKPEEFVRITVDFLR 205 (207)
T ss_dssp SCGG--GHHH--HTTCCSCEEEEEETTCTTTTHHHHHHHHHHST----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred cccc--hhHH--HhhccCCEEEEEECCCCccchHHHHHHHHhcC----CceEEEeCCCCCCccccCHHHHHHHHHHHHh
Confidence 3221 1111 23467999999999999999887766666553 4689999999999876655556666655553
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=166.97 Aligned_cols=184 Identities=20% Similarity=0.227 Sum_probs=136.7
Q ss_pred CCccEEEEEecCC---CCCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLG---DSGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+||++||+| ++...|..+++.+.+. |+.++.+|+|+++.++. +....++
T Consensus 71 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~~-----------------------~~~~~d~ 127 (311)
T 2c7b_A 71 AGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKF-----------------------PTAVEDA 127 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSCT-----------------------THHHHHH
T ss_pred CCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCCC-----------------------CccHHHH
Confidence 3569999999998 7888888888888765 99999999998765311 2233455
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCC----cchh---------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPF----NASL--------- 175 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~----~~~~--------- 175 (251)
.++++++.+..+ ..+++.++++|+|||+||.+++.++.++|+ .++++++++|.... ....
T Consensus 128 ~~~~~~l~~~~~---~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 204 (311)
T 2c7b_A 128 YAALKWVADRAD---ELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGVAETT 204 (311)
T ss_dssp HHHHHHHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHHHCTTC
T ss_pred HHHHHHHHhhHH---HhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHHHhccC
Confidence 556666655544 456677899999999999999999988765 48999999997762 1000
Q ss_pred ----------hhhh------------c----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 176 ----------IDQF------------T----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 176 ----------~~~~------------~----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
...+ . ......|+++++|++|.+++ ....+.+.++..+.++++++++|++|.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~ 282 (311)
T 2c7b_A 205 SLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGLPPALVVTAEYDPLRD--EGELYAYKMKASGSRAVAVRFAGMVHG 282 (311)
T ss_dssp SSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTCCCEEEEEETTCTTHH--HHHHHHHHHHHTTCCEEEEEETTCCTT
T ss_pred CCCHHHHHHHHHHhCCCCccccCcccCcccccccCCCcceEEEcCCCCchH--HHHHHHHHHHHCCCCEEEEEeCCCccc
Confidence 0000 0 00122399999999999876 445678889999999999999999998
Q ss_pred CC---------HHHHHHHHHHHHHhhcC
Q 025550 230 IS---------NEELRNLESWIKTRMSC 248 (251)
Q Consensus 230 ~~---------~~~~~~~~~~l~~~l~~ 248 (251)
+. .+..+.+.+||++.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (311)
T 2c7b_A 283 FVSFYPFVDAGREALDLAAASIRSGLQP 310 (311)
T ss_dssp GGGGTTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred cccccccCHHHHHHHHHHHHHHHHHhcC
Confidence 75 33468888999888753
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-23 Score=163.83 Aligned_cols=215 Identities=17% Similarity=0.111 Sum_probs=145.4
Q ss_pred cceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC-CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC-CCcCCcc
Q 025550 16 GTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS-GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY-GAVMPSW 93 (251)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-g~~~~~w 93 (251)
++..+..++..+. ...+.|+||++||++++ ...+.... .+++.|+.++.+|+|+++.+...... +.....|
T Consensus 65 ~g~~i~~~~~~P~------~~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~ 137 (318)
T 1l7a_A 65 GNARITGWYAVPD------KEGPHPAIVKYHGYNASYDGEIHEMV-NWALHGYATFGMLVRGQQRSEDTSISPHGHALGW 137 (318)
T ss_dssp GGEEEEEEEEEES------SCSCEEEEEEECCTTCCSGGGHHHHH-HHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSS
T ss_pred CCCEEEEEEEeeC------CCCCccEEEEEcCCCCCCCCCccccc-chhhCCcEEEEecCCCCCCCCCcccccCCccccc
Confidence 4555665555421 24577999999999988 76666655 56668999999999998775432110 0011111
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
.... ........+...+.++.++++.+. +.+++.++++++|||+||.+++.++..+|+ ++++++.+|.....
T Consensus 138 ~~~~------~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~ 210 (318)
T 1l7a_A 138 MTKG------ILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNF 210 (318)
T ss_dssp TTTT------TTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCH
T ss_pred eecc------CCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCH
Confidence 1000 001122223445555555555554 344667899999999999999999999886 77777787754321
Q ss_pred chhh-----------------------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 173 ASLI-----------------------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 173 ~~~~-----------------------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
.... ........++|+++++|++|.+++.+.++.+.+.+.. +
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~---~ 287 (318)
T 1l7a_A 211 ERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET---K 287 (318)
T ss_dssp HHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS---S
T ss_pred HHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC---C
Confidence 1100 0001234689999999999999998887777666654 4
Q ss_pred eEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 218 CEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 218 ~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+++++++|++|....+..+.+.+||.++|+
T Consensus 288 ~~~~~~~~~~H~~~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 288 KELKVYRYFGHEYIPAFQTEKLAFFKQILK 317 (318)
T ss_dssp EEEEEETTCCSSCCHHHHHHHHHHHHHHHC
T ss_pred eeEEEccCCCCCCcchhHHHHHHHHHHHhC
Confidence 899999999999888889999999999885
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-23 Score=154.77 Aligned_cols=195 Identities=12% Similarity=0.032 Sum_probs=134.2
Q ss_pred eeecceEEEEEecCCCCCCCCCCC--CCccEEEEEecCCCC---C--CCchhhhhhhcCCCcceEEEEccCCCCCCcccC
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNP--MARNFILWLHGLGDS---G--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCN 85 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vv~~HG~~~~---~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 85 (251)
+...+..+..++..+. .. ++.|+||++||++.. . ..|..+++.|++.||.++.+|+|+.+.+...
T Consensus 15 ~~~~~g~~~~~~~~p~------~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~-- 86 (220)
T 2fuk_A 15 LDGPVGPLDVAVDLPE------PDVAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS-- 86 (220)
T ss_dssp EEETTEEEEEEEECCC------TTSCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC--
T ss_pred EeCCCCeEEEEEEeCC------CCCccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC--
Confidence 3333336666555421 22 458999999996422 2 2246688889989999999999977553211
Q ss_pred CCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 86 YGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 86 ~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
+ . ... ...+++.++++.+... .+.++++++|||+||.+++.++.++ .+++++++
T Consensus 87 -------~------------~-~~~---~~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~ 140 (220)
T 2fuk_A 87 -------F------------D-HGD---GEQDDLRAVAEWVRAQ-RPTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISI 140 (220)
T ss_dssp -------C------------C-TTT---HHHHHHHHHHHHHHHH-CTTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEE
T ss_pred -------c------------c-cCc---hhHHHHHHHHHHHHhc-CCCCcEEEEEECHHHHHHHHHHhhc--cccEEEEe
Confidence 0 0 111 1233344444433322 2567999999999999999999888 79999999
Q ss_pred ccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH---HHHHHHHHH
Q 025550 166 SGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE---ELRNLESWI 242 (251)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~---~~~~~~~~l 242 (251)
++...... +.......|+++++|++|..++.+.++.+.+.++ .+++++++++++|.+..+ ..+.+.+|+
T Consensus 141 ~~~~~~~~-----~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~~~~~~~~~~i~~~l 212 (220)
T 2fuk_A 141 APPAGRWD-----FSDVQPPAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFHRKLIDLRGALQHGV 212 (220)
T ss_dssp SCCBTTBC-----CTTCCCCSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCTTCHHHHHHHHHHHH
T ss_pred cccccchh-----hhhcccCCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCceehhhHHHHHHHHHHHH
Confidence 99776543 1112236899999999999999887766666553 357999999999987642 357788888
Q ss_pred HHhhcCC
Q 025550 243 KTRMSCS 249 (251)
Q Consensus 243 ~~~l~~~ 249 (251)
.+++..+
T Consensus 213 ~~~l~~~ 219 (220)
T 2fuk_A 213 RRWLPAT 219 (220)
T ss_dssp GGGCSSC
T ss_pred HHHhhcC
Confidence 8888654
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-23 Score=158.61 Aligned_cols=179 Identities=14% Similarity=0.126 Sum_probs=130.0
Q ss_pred ccEEEEEecCCCC-CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 39 RNFILWLHGLGDS-GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 39 ~~~vv~~HG~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
.+.||++||++++ ...|..+++.|.+.||.++.+|+||++.+.... . ......+.+.++
T Consensus 23 ~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------~--------------~~~~~~~~~~~~ 82 (254)
T 2ocg_A 23 DHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD------R--------------DFPADFFERDAK 82 (254)
T ss_dssp SEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSC------C--------------CCCTTHHHHHHH
T ss_pred CCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCC------C--------------CCChHHHHHHHH
Confidence 3689999998887 567888999999889999999999886642110 0 111122445566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------h-----
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-----------------L----- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-----------------~----- 175 (251)
++.++++ .. +.+++.|+||||||.+++.+|.++|++++++|++++....... .
T Consensus 83 ~~~~~l~---~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (254)
T 2ocg_A 83 DAVDLMK---AL--KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLE 157 (254)
T ss_dssp HHHHHHH---HT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHHHHHH
T ss_pred HHHHHHH---Hh--CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhHHHHH
Confidence 6666665 33 3468999999999999999999999999999998874321100 0
Q ss_pred -------------------hhhh----------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 176 -------------------IDQF----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 176 -------------------~~~~----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
.... ...++++|+++++|++|.+++.+.++.+.+.+. ..++++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~ 233 (254)
T 2ocg_A 158 ALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK----GSRLHLMPEG 233 (254)
T ss_dssp HHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST----TCEEEEETTC
T ss_pred HHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCC----CCEEEEcCCC
Confidence 0000 012478999999999999999887666655543 3588999999
Q ss_pred CCCCCHHHHHHHHHHHHHhh
Q 025550 227 GHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 227 ~H~~~~~~~~~~~~~l~~~l 246 (251)
||....+..+.+.+.+.++|
T Consensus 234 gH~~~~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 234 KHNLHLRFADEFNKLAEDFL 253 (254)
T ss_dssp CTTHHHHTHHHHHHHHHHHH
T ss_pred CCchhhhCHHHHHHHHHHHh
Confidence 99988777777777777765
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-24 Score=162.51 Aligned_cols=178 Identities=13% Similarity=0.137 Sum_probs=135.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.|.+ ||.++.+|+|+++.+.... .....++.+.++
T Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~---------------------~~~~~~~~~~~~ 79 (278)
T 3oos_A 22 EGPPLCVTHLYSEYNDNGNTFANPFTD-HYSVYLVNLKGCGNSDSAK---------------------NDSEYSMTETIK 79 (278)
T ss_dssp SSSEEEECCSSEECCTTCCTTTGGGGG-TSEEEEECCTTSTTSCCCS---------------------SGGGGSHHHHHH
T ss_pred CCCeEEEEcCCCcchHHHHHHHHHhhc-CceEEEEcCCCCCCCCCCC---------------------CcccCcHHHHHH
Confidence 346899999999999999999998886 9999999999876542110 012234556666
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS----------------------- 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~----------------------- 174 (251)
++.++++ .. +.++++++|||+||.+++.++.++|+++++++++++.......
T Consensus 80 ~~~~~~~---~l--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (278)
T 3oos_A 80 DLEAIRE---AL--YINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNA 154 (278)
T ss_dssp HHHHHHH---HT--TCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHH
T ss_pred HHHHHHH---Hh--CCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHh
Confidence 7777666 33 3458999999999999999999999999999999987650000
Q ss_pred -------------h-------------------------------hh-----h-------hcccCCCCCEEEEccCCCCc
Q 025550 175 -------------L-------------------------------ID-----Q-------FTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 175 -------------~-------------------------------~~-----~-------~~~~~~~~p~l~~~g~~D~~ 198 (251)
. .. . ......++|+++++|++|..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~ 234 (278)
T 3oos_A 155 LNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQ 234 (278)
T ss_dssp HTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSS
T ss_pred hcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCC
Confidence 0 00 0 00124789999999999999
Q ss_pred ccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 199 VLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++.+.++.+.+.+. ..++++++|+||....+..+.+.+.+.++|
T Consensus 235 ~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 235 CPYIFSCEIANLIP----NATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp SCHHHHHHHHHHST----TEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred CCHHHHHHHHhhCC----CcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 99887766666553 469999999999998888888888887764
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-23 Score=158.61 Aligned_cols=183 Identities=15% Similarity=0.212 Sum_probs=135.5
Q ss_pred CCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
++.|+||++||++++...|.. +.+.+.+.||.++.+|+|+++.+.. .....++.+
T Consensus 35 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~-----------------------~~~~~~~~~ 91 (270)
T 3llc_A 35 DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGG-----------------------AFRDGTISR 91 (270)
T ss_dssp TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCS-----------------------CGGGCCHHH
T ss_pred CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCC-----------------------ccccccHHH
Confidence 347999999999988766544 7778878899999999998765321 112234555
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh---cC---CCcceEEEeccCCCCcchhh---------h--
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL---YP---RKLGGGAIFSGWVPFNASLI---------D-- 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~p---~~~~~~i~~~~~~~~~~~~~---------~-- 177 (251)
.++++.++++.+ ..++++|+|||+||.+++.++.+ +| +.+++++++++......... .
T Consensus 92 ~~~d~~~~~~~l-----~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 166 (270)
T 3llc_A 92 WLEEALAVLDHF-----KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAEL 166 (270)
T ss_dssp HHHHHHHHHHHH-----CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHHHHH
T ss_pred HHHHHHHHHHHh-----ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhhhhh
Confidence 667777777643 25799999999999999999999 99 89999999998654322110 0
Q ss_pred --------------------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC
Q 025550 178 --------------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG 225 (251)
Q Consensus 178 --------------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 225 (251)
.......++|+++++|++|.+++.+.++.+.+.+.. .+++++++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~ 244 (270)
T 3llc_A 167 AENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA--DDVVLTLVRD 244 (270)
T ss_dssp HHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS--SSEEEEEETT
T ss_pred hccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC--CCeeEEEeCC
Confidence 000124688999999999999998877766666543 2489999999
Q ss_pred CCCCCC-HHHHHHHHHHHHHhhcCC
Q 025550 226 LGHSIS-NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 226 ~~H~~~-~~~~~~~~~~l~~~l~~~ 249 (251)
++|.+. .+..+.+.+++.++|+++
T Consensus 245 ~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 245 GDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp CCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred CcccccccccHHHHHHHHHHHhcCC
Confidence 999765 566788888888888654
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.3e-24 Score=161.15 Aligned_cols=183 Identities=16% Similarity=0.120 Sum_probs=135.3
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh-HHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES-SLLKA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~-~~~~~ 115 (251)
.+.|+||++||++++...|..+++.|.+.||.++.+|+|+++.+... ..... ...+.
T Consensus 20 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~----------------------~~~~~~~~~~~ 77 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPL----------------------DILTKGNPDIW 77 (251)
T ss_dssp CSSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTH----------------------HHHHHCCHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChh----------------------hhcCcccHHHH
Confidence 35688999999999999999999999999999999999977543100 00111 34444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------------------ 177 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------------------ 177 (251)
++++.++++.+... .++++++|||+||.+++.++.++|+.+++++++++..........
T Consensus 78 ~~d~~~~i~~l~~~---~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T 3dkr_A 78 WAESSAAVAHMTAK---YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDE 154 (251)
T ss_dssp HHHHHHHHHHHHTT---CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHh---cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcc
Confidence 56666666654322 579999999999999999999999999999988887653211000
Q ss_pred ----------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH-
Q 025550 178 ----------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE- 234 (251)
Q Consensus 178 ----------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~- 234 (251)
.......++|+++++|++|..++.+.++.+.+.+... .+++++++++++|.+..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~ 233 (251)
T 3dkr_A 155 STQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSA 233 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTT
T ss_pred hhhHHhhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccc
Confidence 0012346899999999999999999888877777663 4679999999999875432
Q ss_pred ----HHHHHHHHHHh
Q 025550 235 ----LRNLESWIKTR 245 (251)
Q Consensus 235 ----~~~~~~~l~~~ 245 (251)
.+.+.+||++.
T Consensus 234 ~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 234 HHALEEDVIAFMQQE 248 (251)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhh
Confidence 45566666653
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-24 Score=164.93 Aligned_cols=197 Identities=12% Similarity=0.103 Sum_probs=130.3
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPSW 93 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~w 93 (251)
.++..+..+...+.. ...++.|+||++||++++...|..+++.|++.||.++++|+|++ +.+...
T Consensus 15 ~dG~~l~~~~~~p~~----~~~~~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~---------- 80 (305)
T 1tht_A 15 NNGQELHVWETPPKE----NVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS---------- 80 (305)
T ss_dssp TTTEEEEEEEECCCT----TSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC----------------
T ss_pred CCCCEEEEEEecCcc----cCCCCCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCc----------
Confidence 355666655544211 11235689999999999999999999999999999999999986 553210
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~ 173 (251)
....++...++++..+++.+.+. +.++++|+||||||.+++.+|.+ | +++++++.++......
T Consensus 81 -------------~~~~~~~~~~~D~~~~~~~l~~~--~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~ 143 (305)
T 1tht_A 81 -------------IDEFTMTTGKNSLCTVYHWLQTK--GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRD 143 (305)
T ss_dssp ---------------CCCHHHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHH
T ss_pred -------------ccceehHHHHHHHHHHHHHHHhC--CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHH
Confidence 00112333344444444433222 35689999999999999999888 6 7999998876431100
Q ss_pred h--------------------------------hhhh-------------hcccCCCCCEEEEccCCCCcccchhcccch
Q 025550 174 S--------------------------------LIDQ-------------FTSDAKKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 174 ~--------------------------------~~~~-------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
. +... -....+++|+|+++|++|.++|++.++.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~ 223 (305)
T 1tht_A 144 TLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDML 223 (305)
T ss_dssp HHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHH
T ss_pred HHHHHhhhhhhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHH
Confidence 0 0000 011347899999999999999988766555
Q ss_pred HHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 209 PFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
+.+.. .+.++++++++||.+. +..+.+.+|+.+.
T Consensus 224 ~~i~~--~~~~l~~i~~agH~~~-e~p~~~~~fl~~~ 257 (305)
T 1tht_A 224 AHIRT--GHCKLYSLLGSSHDLG-ENLVVLRNFYQSV 257 (305)
T ss_dssp TTCTT--CCEEEEEETTCCSCTT-SSHHHHHHHHHHH
T ss_pred HhcCC--CCcEEEEeCCCCCchh-hCchHHHHHHHHH
Confidence 44422 2579999999999986 5555666666543
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.8e-24 Score=160.89 Aligned_cols=206 Identities=13% Similarity=0.104 Sum_probs=139.2
Q ss_pred cceEEEEEecCCCCCC-CCCCCCCccEEEEEecCCCCCCCchh--hhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCC
Q 025550 16 GTIIFILFFWPSSSYS-HEQNPMARNFILWLHGLGDSGPANEP--IKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMP 91 (251)
Q Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (251)
.+..+..++..|..+. ..+.+++.|+||++||++++...|.. ... .+...|+.++.+++++.+..
T Consensus 17 ~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------- 85 (263)
T 2uz0_A 17 LDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYT----------- 85 (263)
T ss_dssp TTEEEEEEEEECC---------CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTS-----------
T ss_pred hCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccc-----------
Confidence 3445555544433321 01134678999999999999888877 344 45557887776665432110
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH-cCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVA-AGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.+ ..........++++...++.... ..++.++++|+|||+||.+++.++. +|+.++++++++|...
T Consensus 86 ~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~ 152 (263)
T 2uz0_A 86 DT------------QYGFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALS 152 (263)
T ss_dssp BC------------TTSCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCC
T ss_pred cC------------CCcccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcc
Confidence 00 11112234445566666664322 4557789999999999999999999 9999999999999775
Q ss_pred Ccchhh------------hhh---------------cccCC--CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEE
Q 025550 171 FNASLI------------DQF---------------TSDAK--KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 171 ~~~~~~------------~~~---------------~~~~~--~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (251)
...... ..+ ..... .+|+++++|++|.+++ .++.+.+.+++.|.+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~ 230 (263)
T 2uz0_A 153 FQNFSPESQNLGSPAYWRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGFDVTYS 230 (263)
T ss_dssp SSSCCGGGTTCSCHHHHHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTCEEEEE
T ss_pred hhhccccccccccchhHHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCCCeEEE
Confidence 443100 000 00112 2899999999999875 4578999999999999999
Q ss_pred EeCCCCCCCC--HHHHHHHHHHHHHhhcC
Q 025550 222 AYPGLGHSIS--NEELRNLESWIKTRMSC 248 (251)
Q Consensus 222 ~~~g~~H~~~--~~~~~~~~~~l~~~l~~ 248 (251)
+++| +|.+. .+..+++.+||.++++.
T Consensus 231 ~~~g-~H~~~~~~~~~~~~~~~l~~~l~~ 258 (263)
T 2uz0_A 231 HSAG-THEWYYWEKQLEVFLTTLPIDFKL 258 (263)
T ss_dssp EESC-CSSHHHHHHHHHHHHHHSSSCCCC
T ss_pred ECCC-CcCHHHHHHHHHHHHHHHHhhccc
Confidence 9999 99876 67789999999988863
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-23 Score=159.51 Aligned_cols=177 Identities=18% Similarity=0.218 Sum_probs=127.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.|||+||++++...|..+++.|.+.||.++.+|+|+++.+.. +....++.+.++++
T Consensus 20 ~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~a~d~ 76 (271)
T 3ia2_A 20 KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQ-----------------------PWTGNDYDTFADDI 76 (271)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCC-----------------------CCCCCCHHHHHHHH
Confidence 5699999999999999999999988999999999998865421 11123445556677
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCcc-----------hh------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFNA-----------SL------------ 175 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~~-----------~~------------ 175 (251)
.++++.+ +.++++|+||||||.++..++.. .|+++++++++++..+... ..
T Consensus 77 ~~~l~~l-----~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271)
T 3ia2_A 77 AQLIEHL-----DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDR 151 (271)
T ss_dssp HHHHHHH-----TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHh-----CCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHhhH
Confidence 7777643 34689999999999866666555 4889999999876432100 00
Q ss_pred ---hhh----------------------------------------h-------cccCCCCCEEEEccCCCCcccchhcc
Q 025550 176 ---IDQ----------------------------------------F-------TSDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 176 ---~~~----------------------------------------~-------~~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
... + ....+++|+++++|++|.+++.+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~~~ 231 (271)
T 3ia2_A 152 AQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTG 231 (271)
T ss_dssp HHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGGTH
T ss_pred HHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHHHH
Confidence 000 0 01247899999999999999988644
Q ss_pred cchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 206 AGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+....+ -...++++++|+||.+..+..+.+.+-+.++|+
T Consensus 232 ~~~~~~---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 232 KVAAEL---IKGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp HHHHHH---STTCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHh---CCCceEEEEcCCCCcccccCHHHHHHHHHHHhh
Confidence 333333 234689999999999988877777777777764
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-24 Score=163.79 Aligned_cols=179 Identities=12% Similarity=0.152 Sum_probs=130.3
Q ss_pred CCCccEEEEEecCC-----CCCCCchhhhhhh----cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCC
Q 025550 36 PMARNFILWLHGLG-----DSGPANEPIKTLF----TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSP 106 (251)
Q Consensus 36 ~~~~~~vv~~HG~~-----~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~ 106 (251)
+++.|+||++||++ ++...|..+++.| .+.||.++.+|+++.+...
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~~------------------------- 92 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT------------------------- 92 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-------------------------
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCCC-------------------------
Confidence 56789999999966 2445677788877 6789999999998654310
Q ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----------------CCCcceEEEeccCC
Q 025550 107 KDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----------------PRKLGGGAIFSGWV 169 (251)
Q Consensus 107 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------------p~~~~~~i~~~~~~ 169 (251)
....+.+..+.+..+++ + ++.++++|+|||+||.+++.++.++ |+.+++++++++..
T Consensus 93 -~~~~~~d~~~~~~~l~~---~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~ 166 (273)
T 1vkh_A 93 -NPRNLYDAVSNITRLVK---E--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIY 166 (273)
T ss_dssp -TTHHHHHHHHHHHHHHH---H--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCC
T ss_pred -CCcHHHHHHHHHHHHHH---h--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccc
Confidence 11223333333333333 2 3567999999999999999999885 77899999999876
Q ss_pred CCcchhh-----------------h-------hhc------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeE
Q 025550 170 PFNASLI-----------------D-------QFT------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE 219 (251)
Q Consensus 170 ~~~~~~~-----------------~-------~~~------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 219 (251)
+...... . ... ....++|+++++|++|.+++.+.++.+.+.+++.+.+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~ 246 (273)
T 1vkh_A 167 SLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFK 246 (273)
T ss_dssp CHHHHHHHCGGGHHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEE
T ss_pred cHHHhhhhcccHHHHHHHHhcccccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceE
Confidence 4321100 0 000 011678999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 220 FKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 220 ~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+++++|++|.+..+. +++.+.+.++|
T Consensus 247 ~~~~~~~gH~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 247 LYLDDLGLHNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp EEEECCCSGGGGGGC-HHHHHHHHHTC
T ss_pred EEEeCCCcccccccC-hHHHHHHHHHc
Confidence 999999999976555 66666666554
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-24 Score=153.00 Aligned_cols=171 Identities=13% Similarity=0.104 Sum_probs=127.6
Q ss_pred CCccEEEEEecCCCCCCCch--hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGLGDSGPANE--PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+++|+||++||++++...|. .+++.+.+.||.++.+|+|+.+.+.. .....+..+
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~-----------------------~~~~~~~~~ 58 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRD-----------------------LGQLGDVRG 58 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGG-----------------------GCTTCCHHH
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCC-----------------------CCCCCCHHH
Confidence 46789999999998887655 78888998999999999997644210 111223444
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccC
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGM 194 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~ 194 (251)
.++.+.+.++... +.++++++|||+||.+++.++.++| +++++++++........ .....++|+++++|+
T Consensus 59 ~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~----~~~~~~~P~l~i~g~ 128 (176)
T 2qjw_A 59 RLQRLLEIARAAT----EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP----ALDAAAVPISIVHAW 128 (176)
T ss_dssp HHHHHHHHHHHHH----TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC----CCCCCSSCEEEEEET
T ss_pred HHHHHHHHHHhcC----CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC----cccccCCCEEEEEcC
Confidence 4555555555322 3578999999999999999999988 99999999876543211 134578999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+|..++.+.++.+.+.+ +.+++++ +++|.+. +..+++.+++.++++
T Consensus 129 ~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~-~~~~~~~~~i~~fl~ 174 (176)
T 2qjw_A 129 HDELIPAADVIAWAQAR-----SARLLLV-DDGHRLG-AHVQAASRAFAELLQ 174 (176)
T ss_dssp TCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTCT-TCHHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHhC-----CceEEEe-CCCcccc-ccHHHHHHHHHHHHH
Confidence 99999999888777776 3578888 7899984 556666666666664
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.2e-24 Score=162.91 Aligned_cols=180 Identities=14% Similarity=0.084 Sum_probs=134.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.|+||++||++++...|..+++.|.+.||.++.+|+|+++.+... ....+..+.+
T Consensus 38 g~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-----------------------~~~~~~~~~~ 94 (270)
T 3rm3_A 38 NGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYED-----------------------MERTTFHDWV 94 (270)
T ss_dssp CSSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHH-----------------------HHTCCHHHHH
T ss_pred CCCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCccc-----------------------cccCCHHHHH
Confidence 35599999999999999999999999999999999999987553210 0112344556
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------------ 178 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------------ 178 (251)
+++.++++.+... .++++|+|||+||.+++.++.++|+ +++++++++...........
T Consensus 95 ~d~~~~i~~l~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (270)
T 3rm3_A 95 ASVEEGYGWLKQR---CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLK 170 (270)
T ss_dssp HHHHHHHHHHHTT---CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCS
T ss_pred HHHHHHHHHHHhh---CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCcccc
Confidence 6666666654322 6799999999999999999999999 99999999865432211000
Q ss_pred ----------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 179 ----------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 179 ----------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
......++|+++++|++|..++.+.++.+.+.+.. .+++++++++++|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~ 248 (270)
T 3rm3_A 171 NPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS--TEKEIVRLRNSYHVA 248 (270)
T ss_dssp CTTCCCCCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC--SSEEEEEESSCCSCG
T ss_pred ccchHhhcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC--CcceEEEeCCCCccc
Confidence 01134689999999999999999887777776654 357999999999987
Q ss_pred CHH-----HHHHHHHHHHHh
Q 025550 231 SNE-----ELRNLESWIKTR 245 (251)
Q Consensus 231 ~~~-----~~~~~~~~l~~~ 245 (251)
..+ ..+.+.+||.++
T Consensus 249 ~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 249 TLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp GGSTTHHHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHhc
Confidence 632 356677777665
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-23 Score=163.46 Aligned_cols=182 Identities=18% Similarity=0.260 Sum_probs=130.2
Q ss_pred CCCccEEEEEecCCC---CCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLGD---SGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..+.|+||++||+|. +...+..++..++. .|+.++.+|||++|..+. +...++
T Consensus 77 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-----------------------~~~~~D 133 (322)
T 3fak_A 77 CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHPF-----------------------PAAVED 133 (322)
T ss_dssp CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THHHHH
T ss_pred CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCCC-----------------------CcHHHH
Confidence 356799999999773 33345556666654 599999999997764310 112233
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCCCCcchhhhh---------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWVPFNASLIDQ--------- 178 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~~~~~~~~~~--------- 178 (251)
+.++++++. + + +++.++|+|+|+|+||.+++.++.+.++. ++++++++|+..........
T Consensus 134 ~~~a~~~l~---~---~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 206 (322)
T 3fak_A 134 GVAAYRWLL---D---Q-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPM 206 (322)
T ss_dssp HHHHHHHHH---H---H-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCCS
T ss_pred HHHHHHHHH---H---c-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCcc
Confidence 333333332 2 2 77889999999999999999999887654 89999999977643211000
Q ss_pred ---------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 179 ---------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 179 ---------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
........|+++++|+.|.++ +.+..+.+.+++.|+++++++++|++|.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~ 284 (322)
T 3fak_A 207 VAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDDMIHVWH 284 (322)
T ss_dssp CCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGG
T ss_pred cCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCCceeehh
Confidence 000112359999999999874 577789999999999999999999999864
Q ss_pred ---------HHHHHHHHHHHHHhhcCC
Q 025550 232 ---------NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 232 ---------~~~~~~~~~~l~~~l~~~ 249 (251)
.+..+.+.+||.++|+..
T Consensus 285 ~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 285 AFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp GGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 334788999999998643
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-24 Score=161.73 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=134.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+||++||++++...|..+++.|.+ ||.++.+|+|+++.+.... ++ .....++.+.++
T Consensus 19 ~~p~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~---------~~----------~~~~~~~~~~~~ 78 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDF---------FD----------FRRYTTLDPYVD 78 (269)
T ss_dssp CSSEEEEECCTTCCGGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGG---------CC----------TTTCSSSHHHHH
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCC---------CC----------ccccCcHHHHHH
Confidence 558999999999999999999999987 9999999999876542100 00 111224455566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh----------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL---------------------- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~---------------------- 175 (251)
++.++++. . +.++++|+|||+||.+++.++.++|+.+++++++++........
T Consensus 79 ~~~~~~~~---~--~~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (269)
T 4dnp_A 79 DLLHILDA---L--GIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANY 153 (269)
T ss_dssp HHHHHHHH---T--TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHh---c--CCCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccH
Confidence 66666663 2 34689999999999999999999999999999999854321100
Q ss_pred ---h----------------hh--------------------------hcccCCCCCEEEEccCCCCcccchhcccchHH
Q 025550 176 ---I----------------DQ--------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPF 210 (251)
Q Consensus 176 ---~----------------~~--------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~ 210 (251)
. .. -.....++|+++++|++|..++.+.++.+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~ 233 (269)
T 4dnp_A 154 EAWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNH 233 (269)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHH
T ss_pred HHHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHh
Confidence 0 00 00124689999999999999998876666655
Q ss_pred HHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 211 LEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 211 l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
+.. .++++++++++|....+..+.+.+.|.++|..
T Consensus 234 ~~~---~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 234 LGG---KNTVHWLNIEGHLPHLSAPTLLAQELRRALSH 268 (269)
T ss_dssp SSS---CEEEEEEEEESSCHHHHCHHHHHHHHHHHHC-
T ss_pred CCC---CceEEEeCCCCCCccccCHHHHHHHHHHHHhh
Confidence 533 27999999999998877777777777777754
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=167.54 Aligned_cols=186 Identities=21% Similarity=0.261 Sum_probs=137.1
Q ss_pred CCCccEEEEEecCC---CCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLG---DSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..+.|+||++||++ ++...|..++..+.+ .|+.++.+|+|++|.++. +....+
T Consensus 76 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~~-----------------------~~~~~d 132 (323)
T 1lzl_A 76 AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTF-----------------------PGPVND 132 (323)
T ss_dssp CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCT-----------------------THHHHH
T ss_pred CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCCC-----------------------CchHHH
Confidence 35679999999988 666677777777776 599999999998765321 222345
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchhh-----------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASLI----------- 176 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~~----------- 176 (251)
+.++++++.+..+ ..+++.++++|+|||+||.+++.++.+.++ .++++++++|+........
T Consensus 133 ~~~~~~~l~~~~~---~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 209 (323)
T 1lzl_A 133 CYAALLYIHAHAE---ELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTNFVDTPLW 209 (323)
T ss_dssp HHHHHHHHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHHHCSSCSSC
T ss_pred HHHHHHHHHhhHH---HcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhHHHhccCCCC
Confidence 5555666655444 456777899999999999999999988664 4899999998765321100
Q ss_pred --------------------------hhhcc---cC--CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC
Q 025550 177 --------------------------DQFTS---DA--KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG 225 (251)
Q Consensus 177 --------------------------~~~~~---~~--~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 225 (251)
....+ .. ..+|+++++|++|.++ ..++.+.+.+++.|.++++++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g 287 (323)
T 1lzl_A 210 HRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLR--DEGIEYALRLLQAGVSVELHSFPG 287 (323)
T ss_dssp CHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred CHHHHHHHHHHhCCCCcccccccCCCcccCcccCcccCCCChhheEECCcCCch--HHHHHHHHHHHHcCCCEEEEEeCc
Confidence 00000 01 2269999999999987 466789999999999999999999
Q ss_pred CCCCCC--------HHHHHHHHHHHHHhhcCC
Q 025550 226 LGHSIS--------NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 226 ~~H~~~--------~~~~~~~~~~l~~~l~~~ 249 (251)
++|.+. .+..+.+.+||.+.+...
T Consensus 288 ~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 288 TFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp CCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred CccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 999753 234688999999988643
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-23 Score=179.65 Aligned_cols=211 Identities=16% Similarity=0.192 Sum_probs=149.0
Q ss_pred ecc-eEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCch-----hhhhhhcCCCcceEEEEccCCCCCCcccC
Q 025550 15 SGT-IIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PANE-----PIKTLFTSPEFKLTKWSFPSAPNNPVTCN 85 (251)
Q Consensus 15 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 85 (251)
.++ ..+..++..|+.+ +..++.|+||++||++.+. ..|. .+++.|++.||.++.+|+|+++.+.
T Consensus 495 ~~g~~~l~~~~~~P~~~---~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~---- 567 (741)
T 2ecf_A 495 ADGKTPLNYSVIKPAGF---DPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRG---- 567 (741)
T ss_dssp TTSSCEEEEEEECCSSC---CTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSC----
T ss_pred CCCCEEEEEEEEeCCCC---CCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCC----
Confidence 355 6677666654322 1345679999999988764 3455 5778888899999999999875531
Q ss_pred CCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE
Q 025550 86 YGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI 164 (251)
Q Consensus 86 ~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~ 164 (251)
..|..... ....... ++++.+.++.+. +..++.++++|+|||+||.+++.++.++|+.++++++
T Consensus 568 -----~~~~~~~~------~~~~~~~----~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~ 632 (741)
T 2ecf_A 568 -----RDFGGALY------GKQGTVE----VADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVA 632 (741)
T ss_dssp -----HHHHHTTT------TCTTTHH----HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEE
T ss_pred -----hhhhHHHh------hhccccc----HHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEE
Confidence 11111000 0001112 233333333333 3345678999999999999999999999999999999
Q ss_pred eccCCCCcc--------------hhhhh-------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 165 FSGWVPFNA--------------SLIDQ-------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 165 ~~~~~~~~~--------------~~~~~-------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
++|...... ..... ....+.++|+|+++|++|..++.+.++.+++.+++.+.+++++++
T Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 712 (741)
T 2ecf_A 633 GAPVTDWGLYDSHYTERYMDLPARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTY 712 (741)
T ss_dssp ESCCCCGGGSBHHHHHHHHCCTGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cCCCcchhhhccccchhhcCCcccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 998654211 00000 012357899999999999999999999999999999989999999
Q ss_pred CCCCCCCCHH----HHHHHHHHHHHhhc
Q 025550 224 PGLGHSISNE----ELRNLESWIKTRMS 247 (251)
Q Consensus 224 ~g~~H~~~~~----~~~~~~~~l~~~l~ 247 (251)
++++|.+..+ ..+.+.+||.++|+
T Consensus 713 ~~~~H~~~~~~~~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 713 PGAKHGLSGADALHRYRVAEAFLGRCLK 740 (741)
T ss_dssp TTCCSSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCchhHHHHHHHHHHHHhcC
Confidence 9999998743 36788899998885
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=164.99 Aligned_cols=214 Identities=14% Similarity=0.111 Sum_probs=145.7
Q ss_pred cceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC--CCcCCcc
Q 025550 16 GTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY--GAVMPSW 93 (251)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--g~~~~~w 93 (251)
++..+..++..+ ....+.|+||++||++++...|..+.. +.+.||.++.+|+|+++.+...... +.....|
T Consensus 91 ~g~~l~~~~~~P------~~~~~~p~vv~~HG~g~~~~~~~~~~~-~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~ 163 (346)
T 3fcy_A 91 RGARIHAKYIKP------KTEGKHPALIRFHGYSSNSGDWNDKLN-YVAAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGH 163 (346)
T ss_dssp GGCEEEEEEEEE------SCSSCEEEEEEECCTTCCSCCSGGGHH-HHTTTCEEEEECCTTSSSSCCCCCCCSSCCSBCS
T ss_pred CCCEEEEEEEec------CCCCCcCEEEEECCCCCCCCChhhhhH-HHhCCcEEEEEcCCCCCCCCCCCcccCCCCcCcc
Confidence 455555555442 124678999999999999999988775 4578999999999998765433211 1111111
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
....- ........+...+.++...++.+. ...++.++++++|||+||.+++.++..+|+ ++++++++|.....
T Consensus 164 ~~~g~-----~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~ 237 (346)
T 3fcy_A 164 IIRGL-----DDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDY 237 (346)
T ss_dssp SSTTT-----TSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCH
T ss_pred eeccc-----cCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCH
Confidence 11000 001122334444455555555443 334567899999999999999999999997 99999999865421
Q ss_pred chhh-------------hh------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcC
Q 025550 173 ASLI-------------DQ------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG 215 (251)
Q Consensus 173 ~~~~-------------~~------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 215 (251)
.... .. ....+.++|+++++|+.|.+++.+.+.++++.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-- 315 (346)
T 3fcy_A 238 KRVWDLDLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS-- 315 (346)
T ss_dssp HHHHHTTCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS--
T ss_pred HHHhhccccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC--
Confidence 1100 00 00134789999999999999998876666655543
Q ss_pred CeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 216 ISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 216 ~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
+++++++++++|.+..+..+.+.+||.+.
T Consensus 316 -~~~~~~~~~~gH~~~~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 316 -KKDIKVYPDYGHEPMRGFGDLAMQFMLEL 344 (346)
T ss_dssp -SEEEEEETTCCSSCCTTHHHHHHHHHHTT
T ss_pred -CcEEEEeCCCCCcCHHHHHHHHHHHHHHh
Confidence 68999999999999977788899999864
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.5e-24 Score=166.48 Aligned_cols=183 Identities=14% Similarity=0.088 Sum_probs=135.6
Q ss_pred CCccEEEEEecCC---CCCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLG---DSGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~---~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+||++||+| ++...+..++..++ +.|+.++.+||+.+|..+. +....+.
T Consensus 83 ~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~~-----------------------p~~~~D~ 139 (317)
T 3qh4_A 83 TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPY-----------------------PAALHDA 139 (317)
T ss_dssp SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THHHHHH
T ss_pred CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCCC-----------------------chHHHHH
Confidence 6789999999988 56666777777666 5599999999997765311 2234455
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchhhh-----------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASLID----------- 177 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~~~----------- 177 (251)
..+++++.+... ..+++.++|+|+|+|+||.+++.++...++ .++++++++|+.........
T Consensus 140 ~~a~~~l~~~~~---~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 216 (317)
T 3qh4_A 140 IEVLTWVVGNAT---RLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSEFRATPAFDG 216 (317)
T ss_dssp HHHHHHHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHHTTTCSSSCH
T ss_pred HHHHHHHHhhHH---hhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHHHhcCCCCcCH
Confidence 555555555444 467888899999999999999999987654 48999999998765311000
Q ss_pred --------h----------hc-----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC---
Q 025550 178 --------Q----------FT-----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--- 231 (251)
Q Consensus 178 --------~----------~~-----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--- 231 (251)
. .. ....-.|+++++|+.|.+++ .+..+.+.+++.|.++++++++|++|.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~--~~~~~a~~l~~~g~~~~l~~~~g~~H~f~~~~ 294 (317)
T 3qh4_A 217 EAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRD--EVLDYAQRLLGAGVSTELHIFPRACHGFDSLL 294 (317)
T ss_dssp HHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTHHHHC
T ss_pred HHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCch--hHHHHHHHHHHcCCCEEEEEeCCCccchhhhc
Confidence 0 00 00122499999999999865 56788999999999999999999999853
Q ss_pred ------HHHHHHHHHHHHHhhc
Q 025550 232 ------NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 ------~~~~~~~~~~l~~~l~ 247 (251)
.+..+.+.+||+++|.
T Consensus 295 ~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 295 PEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHHHHHHHHhC
Confidence 3346888999998875
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-23 Score=180.56 Aligned_cols=215 Identities=13% Similarity=0.112 Sum_probs=148.4
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCch-hhhhhhc-CCCcceEEEEccCCCCCCcccCCC
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PANE-PIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~~-~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
+..++..+..++..|+.+. ..++.|+||++||++++. ..|. .+...++ +.||.++.+|+|+++...
T Consensus 479 ~~~dg~~l~~~~~~P~~~~---~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g------ 549 (740)
T 4a5s_A 479 IILNETKFWYQMILPPHFD---KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQG------ 549 (740)
T ss_dssp EEETTEEEEEEEEECTTCC---TTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSC------
T ss_pred EccCCeEEEEEEEeCCCCC---CCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCC------
Confidence 3667778877777654332 456789999999987663 2333 2344444 689999999999765321
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
..|..... .......+ +++.+.++.+. ...+|.++++|+|||+||.+++.++.++|+.++++++++
T Consensus 550 ---~~~~~~~~------~~~~~~~~----~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 616 (740)
T 4a5s_A 550 ---DKIMHAIN------RRLGTFEV----EDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVA 616 (740)
T ss_dssp ---HHHHGGGT------TCTTSHHH----HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEES
T ss_pred ---hhHHHHHH------hhhCcccH----HHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcC
Confidence 11111100 01111222 23333333333 333577899999999999999999999999999999999
Q ss_pred cCCCCcc----------------hhhhh-------hcccCCCC-CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 167 GWVPFNA----------------SLIDQ-------FTSDAKKT-PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 167 ~~~~~~~----------------~~~~~-------~~~~~~~~-p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
|...... ..... ....+.+. |+|+++|+.|..++++.++.+++.|++.+.++++++
T Consensus 617 p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~ 696 (740)
T 4a5s_A 617 PVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMW 696 (740)
T ss_dssp CCCCGGGSBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEE
T ss_pred CccchHHhhhHHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCCCeEEEE
Confidence 8654220 00000 01123454 999999999999999999999999999999999999
Q ss_pred eCCCCCCCC-----HHHHHHHHHHHHHhhcCC
Q 025550 223 YPGLGHSIS-----NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 223 ~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 249 (251)
+|+++|.+. .+..+.+.+||.++|+..
T Consensus 697 ~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 697 YTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp ETTCCTTCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCcCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 999999983 233678899999998643
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-23 Score=158.09 Aligned_cols=181 Identities=15% Similarity=0.146 Sum_probs=128.7
Q ss_pred CCCccEEEEEecCCCCCCCchhh-------hhhhcCC----CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCC
Q 025550 36 PMARNFILWLHGLGDSGPANEPI-------KTLFTSP----EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTAS 104 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~-------~~~~~~~----g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~ 104 (251)
+++.|+||++||++++...|... ++.+.+. ++.++.+|+++.+.. +
T Consensus 59 ~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~------------~----------- 115 (268)
T 1jjf_A 59 DKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPG------------I----------- 115 (268)
T ss_dssp TSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTT------------C-----------
T ss_pred CCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcc------------c-----------
Confidence 56789999999999887766554 5555554 588888888754220 0
Q ss_pred CCCChhHH-HHHHHHHHHHHHHHHHcCC--CCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhc-
Q 025550 105 SPKDESSL-LKAVRNVHAMIDKEVAAGI--DPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT- 180 (251)
Q Consensus 105 ~~~~~~~~-~~~~~~l~~~i~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~- 180 (251)
....... .+.++.+...++. +..+ |.++++|+|||+||.+++.++.++|+.++++++++|....... ...+.
T Consensus 116 -~~~~~~~~~~~~~~~~~~l~~--~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~-~~~~~~ 191 (268)
T 1jjf_A 116 -ADGYENFTKDLLNSLIPYIES--NYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN-ERLFPD 191 (268)
T ss_dssp -SCHHHHHHHHHHHTHHHHHHH--HSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH-HHHCTT
T ss_pred -cccHHHHHHHHHHHHHHHHHh--hcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch-hhhcCc
Confidence 0011111 2223444444443 3344 6789999999999999999999999999999999996543221 11111
Q ss_pred ---ccCCCCC-EEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHHh
Q 025550 181 ---SDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKTR 245 (251)
Q Consensus 181 ---~~~~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~ 245 (251)
....+.| +++++|++|.+++. ++.+.+.+++.|.++++++++|++|.+. .+.+.++.+||.+.
T Consensus 192 ~~~~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 192 GGKAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFNVWKPGLWNFLQMADEA 260 (268)
T ss_dssp TTHHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCCceEEEEcCCCCcCHhHHHHHHHHHHHHHHhc
Confidence 0112345 99999999999884 5678999999999999999999999874 56678899999876
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=164.91 Aligned_cols=184 Identities=16% Similarity=0.241 Sum_probs=133.0
Q ss_pred CCCccEEEEEec---CCCCCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHG---LGDSGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG---~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..+.|+||++|| .+++...|..+++.|++. |+.++.+|+++++..+. +....+
T Consensus 71 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~~-----------------------~~~~~d 127 (310)
T 2hm7_A 71 EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF-----------------------PAAVED 127 (310)
T ss_dssp CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THHHHH
T ss_pred CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCCC-----------------------CccHHH
Confidence 356799999999 557778888888888765 99999999998765310 112234
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCc--chh----------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFN--ASL---------- 175 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~--~~~---------- 175 (251)
+.++++++.+... ..+++.++++|+|||+||.+++.++.++|+ .++++++++|..... ...
T Consensus 128 ~~~~~~~l~~~~~---~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 204 (310)
T 2hm7_A 128 AYDALQWIAERAA---DFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENAEGY 204 (310)
T ss_dssp HHHHHHHHHHTTG---GGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTSCCHHHHHTSSSS
T ss_pred HHHHHHHHHhhHH---HhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCcccCCcchhhcCCCC
Confidence 4444444443322 335677899999999999999999998775 699999999876543 000
Q ss_pred ----------hh------------hhcc-----cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC
Q 025550 176 ----------ID------------QFTS-----DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH 228 (251)
Q Consensus 176 ----------~~------------~~~~-----~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H 228 (251)
.. ...+ .....|+++++|++|.++ +.++.+.+.+++.+.++++++++|++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g~~H 282 (310)
T 2hm7_A 205 LLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLIH 282 (310)
T ss_dssp SSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEET
T ss_pred CCCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCCCCEEEEEecCCCch--HHHHHHHHHHHHCCCCEEEEEeCCCcc
Confidence 00 0000 012249999999999987 567788999999999999999999999
Q ss_pred CCC---------HHHHHHHHHHHHHhhc
Q 025550 229 SIS---------NEELRNLESWIKTRMS 247 (251)
Q Consensus 229 ~~~---------~~~~~~~~~~l~~~l~ 247 (251)
.+. .+..+.+.+||+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 283 GFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp TGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred chhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 764 2346778889888763
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=161.97 Aligned_cols=177 Identities=11% Similarity=0.110 Sum_probs=130.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+||++||++++...|..+++.|.+.||.++.+|+|+++.+... .....++.+.++++
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~~~l 62 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRP----------------------IQAVETVDEYSKPL 62 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSC----------------------GGGCCSHHHHHHHH
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCC----------------------CCccccHHHhHHHH
Confidence 88999999999999999999999989999999999987654211 11124566667777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh----------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID---------------------- 177 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~---------------------- 177 (251)
.++++ ..+. .++++|+|||+||.+++.++.++|+.++++|++++..+.......
T Consensus 63 ~~~l~---~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (258)
T 3dqz_A 63 IETLK---SLPE-NEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHE 138 (258)
T ss_dssp HHHHH---TSCT-TCCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEE
T ss_pred HHHHH---Hhcc-cCceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhh
Confidence 77776 3332 378999999999999999999999999999999985432210000
Q ss_pred ----------------------hh-------------------------c----ccCCCCCEEEEccCCCCcccchhccc
Q 025550 178 ----------------------QF-------------------------T----SDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 178 ----------------------~~-------------------------~----~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
.. . ....++|+++++|++|..++.+.++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 218 (258)
T 3dqz_A 139 TRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRW 218 (258)
T ss_dssp ETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHH
T ss_pred hhccChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHH
Confidence 00 0 00135899999999999999887666
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+.+.+. ..++++++++||....+..+.+.+.|.+++
T Consensus 219 ~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 254 (258)
T 3dqz_A 219 MIDNFN----VSKVYEIDGGDHMVMLSKPQKLFDSLSAIA 254 (258)
T ss_dssp HHHHSC----CSCEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred HHHhCC----cccEEEcCCCCCchhhcChHHHHHHHHHHH
Confidence 655553 348899999999987666555555555544
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-24 Score=162.83 Aligned_cols=183 Identities=12% Similarity=0.114 Sum_probs=134.4
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.....|+||++||++++...|..+++.|.+.||.++.+|+|+++.+... .....++.+
T Consensus 8 ~~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~----------------------~~~~~~~~~ 65 (267)
T 3sty_A 8 SPFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQ----------------------ALQIPNFSD 65 (267)
T ss_dssp --CCCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCC----------------------GGGCCSHHH
T ss_pred CCCCCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCc----------------------CCccCCHHH
Confidence 3456789999999999999999999999988999999999987654211 111245666
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh----hh------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI----DQ------------ 178 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~----~~------------ 178 (251)
.++++.++++ ..+ +.++++|+|||+||.+++.++.++|+.+++++++++..+...... ..
T Consensus 66 ~~~~~~~~l~---~l~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (267)
T 3sty_A 66 YLSPLMEFMA---SLP-ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNC 141 (267)
T ss_dssp HHHHHHHHHH---TSC-TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCE
T ss_pred HHHHHHHHHH---hcC-CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhh
Confidence 6777777776 222 367999999999999999999999999999999988543221000 00
Q ss_pred ---------------------------------------------------hc-------ccCCCCCEEEEccCCCCccc
Q 025550 179 ---------------------------------------------------FT-------SDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 179 ---------------------------------------------------~~-------~~~~~~p~l~~~g~~D~~~~ 200 (251)
+. ....++|+++++|++|..++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 221 (267)
T 3sty_A 142 VTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALK 221 (267)
T ss_dssp EECTTCTTSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHH
T ss_pred hhhhhhhhcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccC
Confidence 00 00124899999999999999
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+..+.+.+.+. ..++++++++||....+..+.+.+.|.+++.
T Consensus 222 ~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 264 (267)
T 3sty_A 222 KEFLKLMIEKNP----PDEVKEIEGSDHVTMMSKPQQLFTTLLSIAN 264 (267)
T ss_dssp HHHHHHHHHHSC----CSEEEECTTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----CceEEEeCCCCccccccChHHHHHHHHHHHH
Confidence 887665555543 3689999999999887776666666666654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.2e-23 Score=174.80 Aligned_cols=213 Identities=13% Similarity=0.072 Sum_probs=148.6
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--Cchhhh-hhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIK-TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
+.++..+..++..|... +.+++.|+||++||+.+... .|.... +.|.++||.++.+|+++++.. +
T Consensus 456 s~DG~~i~~~l~~P~~~---~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~---------G 523 (711)
T 4hvt_A 456 SFDGVKIPYFLVYKKGI---KFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEF---------G 523 (711)
T ss_dssp CTTSCEEEEEEEEETTC---CCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTT---------C
T ss_pred CCCCeEEEEEEEecCCC---CCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCc---------c
Confidence 45666777776654322 23567899999999765443 343333 478889999999999976432 2
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
..|...... ...... ++++.+.++.+. +..+++++++|+|+|+||.++..++.++|+.++++|+.+|..
T Consensus 524 ~~~~~~~~~------~~~~~~----~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~ 593 (711)
T 4hvt_A 524 PEWHKSAQG------IKRQTA----FNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPIL 593 (711)
T ss_dssp HHHHHTTSG------GGTHHH----HHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred hhHHHhhhh------ccCcCc----HHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCcc
Confidence 334322211 111222 333333333333 445688999999999999999999999999999999999866
Q ss_pred CCcchhh--------hh---------------hc----ccCCCC--CEEEEccCCCCcccchhcccchHHH-HhcCCeeE
Q 025550 170 PFNASLI--------DQ---------------FT----SDAKKT--PILWSHGMADRTVLFEAGQAGPPFL-EQAGISCE 219 (251)
Q Consensus 170 ~~~~~~~--------~~---------------~~----~~~~~~--p~l~~~g~~D~~~~~~~~~~~~~~l-~~~~~~~~ 219 (251)
+...... .. .+ ..+.++ |+|+++|++|..+++.++++++++| ++.|.+++
T Consensus 594 D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~ 673 (711)
T 4hvt_A 594 DMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTY 673 (711)
T ss_dssp CTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEE
T ss_pred chhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEE
Confidence 5421100 00 01 112344 9999999999999999999999999 99999999
Q ss_pred EEEeCCCCCCCCH------HHHHHHHHHHHHhhcC
Q 025550 220 FKAYPGLGHSISN------EELRNLESWIKTRMSC 248 (251)
Q Consensus 220 ~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~ 248 (251)
++++++++|.+.. +....+.+||.++|+.
T Consensus 674 l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 674 FLESKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp EEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 9999999998742 2356688999999864
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-23 Score=160.74 Aligned_cols=184 Identities=16% Similarity=0.189 Sum_probs=134.2
Q ss_pred CCCccEEEEEecCC---CCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLG---DSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..+.|+||++||+| ++...|..+++.|++ .|+.++.+|+|++|.++. +....+
T Consensus 87 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~~-----------------------p~~~~d 143 (323)
T 3ain_A 87 QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKF-----------------------PAAVVD 143 (323)
T ss_dssp CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THHHHH
T ss_pred CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCCC-----------------------cchHHH
Confidence 45679999999965 677788888888875 499999999998765311 112344
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCc---ceEEEeccCCCCcchhh------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKL---GGGAIFSGWVPFNASLI------------ 176 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~---~~~i~~~~~~~~~~~~~------------ 176 (251)
..++++++.+... ..+ +.++++|+|+|+||.+++.++.+.|+.. +++++++|.........
T Consensus 144 ~~~~~~~l~~~~~---~lg-d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~l~ 219 (323)
T 3ain_A 144 SFDALKWVYNNSE---KFN-GKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLT 219 (323)
T ss_dssp HHHHHHHHHHTGG---GGT-CTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHHHHSSSSSSC
T ss_pred HHHHHHHHHHhHH---HhC-CCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHHHhccCCCCC
Confidence 4444444444332 345 7889999999999999999999888765 88999998765321100
Q ss_pred --------h------------hhc----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH
Q 025550 177 --------D------------QFT----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN 232 (251)
Q Consensus 177 --------~------------~~~----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~ 232 (251)
. ... ......|+++++|+.|.++ +.++.+.+.+++.+.++++++++|++|.+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l~P~lii~G~~D~l~--~~~~~~a~~l~~ag~~~~~~~~~g~~H~~~~ 297 (323)
T 3ain_A 220 REHIDWFGQQYLRSFADLLDFRFSPILADLNDLPPALIITAEHDPLR--DQGEAYANKLLQSGVQVTSVGFNNVIHGFVS 297 (323)
T ss_dssp HHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGG
T ss_pred HHHHHHHHHHhCCCCcccCCcccCcccCcccCCCHHHEEECCCCccH--HHHHHHHHHHHHcCCCEEEEEECCCcccccc
Confidence 0 000 0012249999999999987 4667889999999999999999999998753
Q ss_pred ---------HHHHHHHHHHHHhhcC
Q 025550 233 ---------EELRNLESWIKTRMSC 248 (251)
Q Consensus 233 ---------~~~~~~~~~l~~~l~~ 248 (251)
+..+.+.+||++.+..
T Consensus 298 ~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 298 FFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp GTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 3467888999888753
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-23 Score=161.11 Aligned_cols=221 Identities=12% Similarity=0.055 Sum_probs=145.1
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCccc---C--CCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTC---N--YGAV 89 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~--~g~~ 89 (251)
.++..+..++..+. ...++.|+||++||++++... ......+.+.||.++.+|+|+++.+.... . .+..
T Consensus 76 ~dg~~i~~~~~~P~-----~~~~~~p~vv~~HG~g~~~~~-~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~ 149 (337)
T 1vlq_A 76 YRGQRIKGWLLVPK-----LEEEKLPCVVQYIGYNGGRGF-PHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPV 149 (337)
T ss_dssp GGGCEEEEEEEEEC-----CSCSSEEEEEECCCTTCCCCC-GGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred CCCCEEEEEEEecC-----CCCCCccEEEEEcCCCCCCCC-chhhcchhhCCCEEEEecCCCCCCcccCCCCcccccccC
Confidence 34555665555421 114567999999999877644 34455677789999999999987542110 0 0000
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
...|...... .........+...++++.+.++.+. +..++.++++++|||+||.+++.++...| .++++++.++.
T Consensus 150 ~~~~~~~~~~---g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~ 225 (337)
T 1vlq_A 150 DPQYPGFMTR---GILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPF 225 (337)
T ss_dssp CCCCSSSTTT---TTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCC
T ss_pred CCCCCccccc---CCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCc
Confidence 0111111100 0011222334455666666666554 34456789999999999999999999998 59999988885
Q ss_pred CCCcchhh---------------------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcC
Q 025550 169 VPFNASLI---------------------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG 215 (251)
Q Consensus 169 ~~~~~~~~---------------------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 215 (251)
........ ........++|+++++|+.|.+++++.++++++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~-- 303 (337)
T 1vlq_A 226 LCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG-- 303 (337)
T ss_dssp SCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS--
T ss_pred ccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC--
Confidence 54211100 0001134689999999999999999887777776654
Q ss_pred CeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhhcC
Q 025550 216 ISCEFKAYPGLGHSIS-NEELRNLESWIKTRMSC 248 (251)
Q Consensus 216 ~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~ 248 (251)
+++++++++++|.+. .+..+.+.+||.++|+.
T Consensus 304 -~~~~~~~~~~gH~~~~~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 304 -PKEIRIYPYNNHEGGGSFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp -SEEEEEETTCCTTTTHHHHHHHHHHHHHHHHC-
T ss_pred -CcEEEEcCCCCCCCcchhhHHHHHHHHHHHHhc
Confidence 589999999999965 55678899999999863
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.1e-23 Score=156.62 Aligned_cols=176 Identities=14% Similarity=0.194 Sum_probs=131.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++||++++...|..+++.|.+ +|.++.+|+||++.+.. +....++.+.+++
T Consensus 26 ~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 81 (266)
T 2xua_A 26 APWIVLSNSLGTDLSMWAPQVAALSK-HFRVLRYDTRGHGHSEA-----------------------PKGPYTIEQLTGD 81 (266)
T ss_dssp CCEEEEECCTTCCGGGGGGGHHHHHT-TSEEEEECCTTSTTSCC-----------------------CSSCCCHHHHHHH
T ss_pred CCeEEEecCccCCHHHHHHHHHHHhc-CeEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHH
Confidence 57899999999999999999998874 59999999998865421 1112345566777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------hh----h
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-----------------LI----D 177 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-----------------~~----~ 177 (251)
+.++++. .+ .+++.|+||||||.+++.+|.++|++++++|++++....... .. .
T Consensus 82 l~~~l~~---l~--~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T 2xua_A 82 VLGLMDT---LK--IARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAVLP 156 (266)
T ss_dssp HHHHHHH---TT--CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHh---cC--CCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 7777773 33 458999999999999999999999999999999875322100 00 0
Q ss_pred h----------------------------------------h--cccCCCCCEEEEccCCCCcccchhcccchHHHHhcC
Q 025550 178 Q----------------------------------------F--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG 215 (251)
Q Consensus 178 ~----------------------------------------~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 215 (251)
. . ....+++|+++++|++|..++.+.++.+.+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-- 234 (266)
T 2xua_A 157 RWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIAG-- 234 (266)
T ss_dssp HHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT--
T ss_pred HHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCCC--
Confidence 0 0 0123789999999999999998876666555533
Q ss_pred CeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 216 ISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 216 ~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.++++++ +||....+..+.+.+-+.+++..
T Consensus 235 --~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 235 --ARYVELD-ASHISNIERADAFTKTVVDFLTE 264 (266)
T ss_dssp --CEEEEES-CCSSHHHHTHHHHHHHHHHHHTC
T ss_pred --CEEEEec-CCCCchhcCHHHHHHHHHHHHHh
Confidence 5889999 99998877777777777777654
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.91 E-value=8.2e-24 Score=166.27 Aligned_cols=179 Identities=23% Similarity=0.348 Sum_probs=128.2
Q ss_pred ccEEEEEecCC---CCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 39 RNFILWLHGLG---DSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 39 ~~~vv~~HG~~---~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.++||++||+| ++...|..++..+++ .|+.++.+||++++..+. +...+++.+
T Consensus 80 ~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~-----------------------~~~~~d~~~ 136 (322)
T 3k6k_A 80 AAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPF-----------------------PAAVDDCVA 136 (322)
T ss_dssp SCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSCT-----------------------THHHHHHHH
T ss_pred CeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCCC-----------------------chHHHHHHH
Confidence 34499999977 455556667777765 499999999997765310 112233333
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCCCCcchhhh-------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWVPFNASLID------------- 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~~~~~~~~~------------- 177 (251)
+++++.+ .+++.++|+|+|+|+||.+++.++.+.++. ++++++++|+.........
T Consensus 137 a~~~l~~-------~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~ 209 (322)
T 3k6k_A 137 AYRALLK-------TAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLADRDFLAEP 209 (322)
T ss_dssp HHHHHHH-------HHSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSHHHHHTGGGCSSSCH
T ss_pred HHHHHHH-------cCCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCccchhhccCCCCcCCH
Confidence 3333322 256788999999999999999999987765 8999999997764321100
Q ss_pred -----------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC---
Q 025550 178 -----------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--- 231 (251)
Q Consensus 178 -----------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--- 231 (251)
........+|+++++|++|.+ .+.++.+.+.+++.|.++++++++|++|.+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~--~~~~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~ 287 (322)
T 3k6k_A 210 DTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEAL--LSDSTTLAERAGAAGVSVELKIWPDMPHVFQMYG 287 (322)
T ss_dssp HHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGGGGT
T ss_pred HHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCcc--HHHHHHHHHHHHHCCCCEEEEEECCCcccccccc
Confidence 000012346999999999987 4577889999999999999999999999864
Q ss_pred ------HHHHHHHHHHHHHhhcCC
Q 025550 232 ------NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 232 ------~~~~~~~~~~l~~~l~~~ 249 (251)
.+..+.+.+||.++++..
T Consensus 288 ~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 288 KFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCC--
T ss_pred ccChHHHHHHHHHHHHHHHHHhcc
Confidence 244788999999998743
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=158.55 Aligned_cols=194 Identities=16% Similarity=0.149 Sum_probs=143.0
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+..++..+..+... +++.|+||++||++++...|..+++.|.+.||.++.+|+|+.+.+....
T Consensus 7 ~~~~~~g~~l~~~~~g---------~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~------ 71 (286)
T 3qit_A 7 KFLEFGGNQICLCSWG---------SPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE------ 71 (286)
T ss_dssp EEEEETTEEEEEEEES---------CTTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------
T ss_pred heeecCCceEEEeecC---------CCCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCC------
Confidence 4455677776655443 2345789999999999999999999999999999999999876542110
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.....+..+.++++..+++ .. +.++++++|||+||.+++.++.++|+.+++++++++...
T Consensus 72 ---------------~~~~~~~~~~~~~~~~~~~---~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 131 (286)
T 3qit_A 72 ---------------MVTSYSSLTFLAQIDRVIQ---EL--PDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLP 131 (286)
T ss_dssp ---------------SGGGCSHHHHHHHHHHHHH---HS--CSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred ---------------CCCCcCHHHHHHHHHHHHH---hc--CCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCC
Confidence 0123345556666766666 33 446899999999999999999999999999999998654
Q ss_pred Ccchh-----------------------h----------------------hh---------------------------
Q 025550 171 FNASL-----------------------I----------------------DQ--------------------------- 178 (251)
Q Consensus 171 ~~~~~-----------------------~----------------------~~--------------------------- 178 (251)
..... . ..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (286)
T 3qit_A 132 AEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSIL 211 (286)
T ss_dssp CCC---CCHHHHHHHHHHHHTCCCCCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHH
T ss_pred CccccchhhhHHHHHHHHHHhccccccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccc
Confidence 32211 0 00
Q ss_pred -------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 025550 179 -------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKT 244 (251)
Q Consensus 179 -------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 244 (251)
-...+.++|+++++|++|.+++.+..+.+.+.+. ..++++++| ||....+..+.+.+.|.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 212 GLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMTMT----QAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp TTTSCTTHHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHST----TSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred cccccccchhHHHHHHhccCCCeEEEEeCCCcccCHHHHHHHHHHCC----CCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 0002368999999999999999887666555543 358999999 999988888888887764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-23 Score=177.46 Aligned_cols=209 Identities=11% Similarity=0.122 Sum_probs=143.2
Q ss_pred cc-eEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCchh----hhhhhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 16 GT-IIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PANEP----IKTLFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 16 ~~-~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
++ ..+..+...|+.+ ..+++.|+||++||++... ..|.. +++.|+++||.++.+|+|+.+.+.
T Consensus 464 ~g~~~~~~~~~~P~~~---~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~------ 534 (706)
T 2z3z_A 464 DGQTPLYYKLTMPLHF---DPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRG------ 534 (706)
T ss_dssp TSSSEEEEEEECCTTC---CTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSC------
T ss_pred CCCEEEEEEEEeCCCC---CCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccc------
Confidence 44 4666655554322 1345679999999977654 34554 577888899999999999875431
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
..+..... ....... ++++.+.++.+. ...++.++++|+|||+||.+++.++.++|+.++++++++
T Consensus 535 ---~~~~~~~~------~~~~~~~----~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 601 (706)
T 2z3z_A 535 ---AAFEQVIH------RRLGQTE----MADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 601 (706)
T ss_dssp ---HHHHHTTT------TCTTHHH----HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEES
T ss_pred ---hhHHHHHh------hccCCcc----HHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcC
Confidence 11110000 0111122 333333333332 333567899999999999999999999999999999999
Q ss_pred cCCCCcch---h--------------hh----hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC
Q 025550 167 GWVPFNAS---L--------------ID----QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG 225 (251)
Q Consensus 167 ~~~~~~~~---~--------------~~----~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 225 (251)
|....... + .. .....+.++|+|+++|++|..++++.++.+++.+++.+.+++++++|+
T Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 681 (706)
T 2z3z_A 602 PVIDWNRYAIMYGERYFDAPQENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYPDYYVYPS 681 (706)
T ss_dssp CCCCGGGSBHHHHHHHHCCTTTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCCEEEEETT
T ss_pred CccchHHHHhhhhhhhcCCcccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 86542110 0 00 011234779999999999999999999999999999888999999999
Q ss_pred CCCCCCHH----HHHHHHHHHHHhh
Q 025550 226 LGHSISNE----ELRNLESWIKTRM 246 (251)
Q Consensus 226 ~~H~~~~~----~~~~~~~~l~~~l 246 (251)
++|.+..+ ..+.+.+||.++|
T Consensus 682 ~gH~~~~~~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 682 HEHNVMGPDRVHLYETITRYFTDHL 706 (706)
T ss_dssp CCSSCCTTHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhC
Confidence 99998633 3567778887764
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=160.14 Aligned_cols=177 Identities=14% Similarity=0.134 Sum_probs=130.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
+.|+||++||++++...|..+.+.|.+ .||.++.+|+|+++.+.. ... .+..+.+
T Consensus 20 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~-----------------------~~~-~~~~~~~ 75 (272)
T 3fsg_A 20 SGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDP-----------------------ISP-STSDNVL 75 (272)
T ss_dssp CSSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCC-----------------------CSS-CSHHHHH
T ss_pred CCCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCC-----------------------CCC-CCHHHHH
Confidence 346899999999999999998888876 799999999998765321 111 4566667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh---------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL--------------------- 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~--------------------- 175 (251)
+++.++++... +.++++|+|||+||.+++.++.++|+.+++++++++........
T Consensus 76 ~~~~~~l~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T 3fsg_A 76 ETLIEAIEEII----GARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKE 151 (272)
T ss_dssp HHHHHHHHHHH----TTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGG
T ss_pred HHHHHHHHHHh----CCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHH
Confidence 77777777422 45789999999999999999999999999999999864221100
Q ss_pred ----------------hh-------------------------------hhcccCCCCCEEEEccCCCCcccchhcccch
Q 025550 176 ----------------ID-------------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 176 ----------------~~-------------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
.. .......++|+++++|++|..++.+.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 231 (272)
T 3fsg_A 152 YFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLI 231 (272)
T ss_dssp GHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHH
T ss_pred HHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHH
Confidence 00 0011357899999999999999988765555
Q ss_pred HHHHhcCCeeEEEEeCCCCCCCCHHHHHH----HHHHHHHhh
Q 025550 209 PFLEQAGISCEFKAYPGLGHSISNEELRN----LESWIKTRM 246 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~~l 246 (251)
+.+ ...++++++++||....+..+. +.+||.+..
T Consensus 232 ~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 232 NHN----ENGEIVLLNRTGHNLMIDQREAVGFHFDLFLDELN 269 (272)
T ss_dssp TTC----TTEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHHH
T ss_pred Hhc----CCCeEEEecCCCCCchhcCHHHHHHHHHHHHHHhh
Confidence 444 3479999999999987655444 555555443
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-22 Score=156.86 Aligned_cols=178 Identities=16% Similarity=0.219 Sum_probs=128.1
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+.+.|.+.||.++++|+||++.+.. +....++.+.+++
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~a~d 83 (281)
T 3fob_A 27 GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQ-----------------------PWEGYEYDTFTSD 83 (281)
T ss_dssp SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCC-----------------------CccccCHHHHHHH
Confidence 36789999999999999999998988899999999998865421 1112345556677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCc-----------c-hh----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFN-----------A-SL---------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~-----------~-~~---------- 175 (251)
+.++++ .. +.+++.|+||||||.+++.++.. .|+++++++++++..+.. . ..
T Consensus 84 l~~ll~---~l--~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (281)
T 3fob_A 84 LHQLLE---QL--ELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVIN 158 (281)
T ss_dssp HHHHHH---HT--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHH
T ss_pred HHHHHH---Hc--CCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhh
Confidence 777776 33 34689999999999887776665 489999999887642210 0 00
Q ss_pred -----hh--------------h---------------------------h-------cccCCCCCEEEEccCCCCcccch
Q 025550 176 -----ID--------------Q---------------------------F-------TSDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 176 -----~~--------------~---------------------------~-------~~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
.. . + ...++++|+++++|++|.++|.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~ 238 (281)
T 3fob_A 159 DRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFE 238 (281)
T ss_dssp HHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGG
T ss_pred hHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHH
Confidence 00 0 0 01247899999999999999987
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. +.+.+.-...++++++++||....+..+.+.+-+.++|+
T Consensus 239 ~~~---~~~~~~~p~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 239 YSG---KLTHEAIPNSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp GTH---HHHHHHSTTCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred HHH---HHHHHhCCCceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 542 222232234689999999999988888888877777764
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=161.41 Aligned_cols=179 Identities=12% Similarity=0.116 Sum_probs=134.4
Q ss_pred CccEEEEEecCCCCCCCch-hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANE-PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
+.|+||++||++++...|. .+...+.+.||.++.+|+|+++.+. .....+..+.+
T Consensus 42 ~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~------------------------~~~~~~~~~~~ 97 (293)
T 3hss_A 42 TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATE------------------------NAEGFTTQTMV 97 (293)
T ss_dssp SSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGT------------------------TCCSCCHHHHH
T ss_pred CCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCC------------------------CcccCCHHHHH
Confidence 5578999999999999998 6788888899999999999774321 11123455566
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------------------- 177 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------------------- 177 (251)
+++..+++.+ +.++++|+|||+||.+++.+|.++|+.+++++++++..........
T Consensus 98 ~~~~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (293)
T 3hss_A 98 ADTAALIETL-----DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTY 172 (293)
T ss_dssp HHHHHHHHHH-----TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHHhc-----CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhH
Confidence 6777777643 3468999999999999999999999999999999986543211000
Q ss_pred --------h-------------------------------------------hcccCCCCCEEEEccCCCCcccchhccc
Q 025550 178 --------Q-------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 178 --------~-------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
. ......++|+++++|++|..++.+.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~ 252 (293)
T 3hss_A 173 DARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGRE 252 (293)
T ss_dssp HHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHH
Confidence 0 0002478999999999999999887666
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
+.+.+. ..++++++++||....+..+.+.+.+.++|...
T Consensus 253 ~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 253 VADALP----NGRYLQIPDAGHLGFFERPEAVNTAMLKFFASV 291 (293)
T ss_dssp HHHHST----TEEEEEETTCCTTHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHHCC----CceEEEeCCCcchHhhhCHHHHHHHHHHHHHhc
Confidence 665553 468999999999988777777777777776543
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-23 Score=159.98 Aligned_cols=205 Identities=11% Similarity=0.054 Sum_probs=136.3
Q ss_pred CCCccEEEEEecCCCCCCCchh---hhhhhcCCCcceEEEEccCCCCCCccc---CCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTC---NYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+++.|+||++||++++...|.. +.+.+.+.|+.++.+|.+..+...... ..|. +..|+..... .......
T Consensus 48 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~-g~~~~~~~~~---~~~~~~~ 123 (283)
T 4b6g_A 48 NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQ-SAGFYLNATE---QPWAANY 123 (283)
T ss_dssp CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBT-TBCTTSBCCS---TTGGGTC
T ss_pred CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccC-CCcccccCcc---Ccccchh
Confidence 5678999999999988877643 455666789999999876332210000 0000 0111111100 0000001
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-------------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------- 176 (251)
.......+++...++.. .. +.++++|+|||+||.+++.++.++|+.++++++++|.........
T Consensus 124 ~~~~~~~~~~~~~i~~~--~~-~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~ 200 (283)
T 4b6g_A 124 QMYDYILNELPRLIEKH--FP-TNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVPWGEKAFTAYLGKDR 200 (283)
T ss_dssp BHHHHHHTHHHHHHHHH--SC-EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSHHHHHHHHHHHCSCG
T ss_pred hHHHHHHHHHHHHHHHh--CC-CCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCcchhhhHHhhcCCch
Confidence 11233344555555532 22 357999999999999999999999999999999999765332100
Q ss_pred ---------hhhcccCCCCCEEEEccCCCCcccc-hhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 177 ---------DQFTSDAKKTPILWSHGMADRTVLF-EAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 177 ---------~~~~~~~~~~p~l~~~g~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
.........+|+++++|+.|.+++. ..++.+.+.+++.|.++++++++|++|.+. .+.+++.++|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~l~~~l~~~~~ 280 (283)
T 4b6g_A 201 EKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAA 280 (283)
T ss_dssp GGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCCCceEEEeCCCCcCHhHHHHHHHHHHHHHHH
Confidence 0011112456999999999999886 237789999999999999999999999864 4667899999988
Q ss_pred hhc
Q 025550 245 RMS 247 (251)
Q Consensus 245 ~l~ 247 (251)
+|+
T Consensus 281 ~l~ 283 (283)
T 4b6g_A 281 FLK 283 (283)
T ss_dssp TCC
T ss_pred hcC
Confidence 774
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-22 Score=161.65 Aligned_cols=203 Identities=13% Similarity=0.131 Sum_probs=145.6
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+..++..+..|+..++ ..++.|+||++||++++...+...+..+.++||.++.+|+|+.+.+. +
T Consensus 130 v~~~~dg~~i~~~l~~p~------~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~-----~--- 195 (386)
T 2jbw_A 130 HELVVDGIPMPVYVRIPE------GPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMF-----E--- 195 (386)
T ss_dssp EEEEETTEEEEEEEECCS------SSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGT-----T---
T ss_pred EEEEeCCEEEEEEEEcCC------CCCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCC-----C---
Confidence 334447788888777632 22577999999999998887777788888899999999999865420 0
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
. .....+..+.+..+.+++.. +..++.++++|+|||+||.+++.++.+ |++++++|++ |...
T Consensus 196 -~-------------~~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~ 257 (386)
T 2jbw_A 196 -Y-------------KRIAGDYEKYTSAVVDLLTK--LEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFS 257 (386)
T ss_dssp -T-------------CCSCSCHHHHHHHHHHHHHH--CTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCS
T ss_pred -C-------------CCCCccHHHHHHHHHHHHHh--CCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCC
Confidence 0 11112233334444444432 223567899999999999999999998 8899999999 8655
Q ss_pred Ccchh-----------------------h-h---hh----cccCCCCCEEEEccCCCCcccchhcccchHHH-HhcCCee
Q 025550 171 FNASL-----------------------I-D---QF----TSDAKKTPILWSHGMADRTVLFEAGQAGPPFL-EQAGISC 218 (251)
Q Consensus 171 ~~~~~-----------------------~-~---~~----~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l-~~~~~~~ 218 (251)
..... . . .. ...+.++|+|+++|++|. ++.+.++.+++.+ +. ++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~ 333 (386)
T 2jbw_A 258 DLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HL 333 (386)
T ss_dssp CSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GE
T ss_pred hHHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---Cc
Confidence 42211 0 0 00 123468999999999999 8999888888887 54 57
Q ss_pred EEEEeCCCCCCCC---HHHHHHHHHHHHHhhcCC
Q 025550 219 EFKAYPGLGHSIS---NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 219 ~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~~ 249 (251)
+++++++++|.+. .+..+.+.+||.++++..
T Consensus 334 ~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 334 NLVVEKDGDHCCHNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp EEEEETTCCGGGGGGTTHHHHHHHHHHHHHHTSS
T ss_pred EEEEeCCCCcCCccchHHHHHHHHHHHHHhcCCc
Confidence 9999999999763 455788999999998743
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-23 Score=158.12 Aligned_cols=176 Identities=16% Similarity=0.248 Sum_probs=130.0
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.||++||++++...|..+++.|.+.||.++.+|+||++.+.. +....++.+.++++
T Consensus 24 ~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~a~dl 80 (277)
T 1brt_A 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQ-----------------------PTTGYDYDTFAADL 80 (277)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCC-----------------------CCCCccHHHHHHHH
Confidence 3499999999999999999999988899999999998866421 11123455567777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEeccCCCCc--------c----h------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSGWVPFN--------A----S------------ 174 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~~~~~~--------~----~------------ 174 (251)
.++++.+ +.++++|+||||||.+++.+|.++|+ +++++|++++..+.. . .
T Consensus 81 ~~~l~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (277)
T 1brt_A 81 NTVLETL-----DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKAD 155 (277)
T ss_dssp HHHHHHH-----TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHh-----CCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcC
Confidence 7777743 34689999999999999999999998 999999988632210 0 0
Q ss_pred -----------hhh-------hh---------------------------------cccCCCCCEEEEccCCCCcccchh
Q 025550 175 -----------LID-------QF---------------------------------TSDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 175 -----------~~~-------~~---------------------------------~~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
+.. .. ...++++|+++++|++|.+++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 235 (277)
T 1brt_A 156 RYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIEN 235 (277)
T ss_dssp HHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGG
T ss_pred chhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHH
Confidence 000 00 012378999999999999999886
Q ss_pred c-ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 204 G-QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 204 ~-~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+ +.+.+.+. ..++++++++||....+..+.+.+-+.+++.
T Consensus 236 ~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 236 TARVFHKALP----SAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276 (277)
T ss_dssp THHHHHHHCT----TSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHCC----CCcEEEeCCCCcchhhhCHHHHHHHHHHHHh
Confidence 6 55554443 4589999999999877776666666666653
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-24 Score=162.29 Aligned_cols=181 Identities=15% Similarity=0.133 Sum_probs=132.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+||++||++++...|..+++.|.+ ||.++.+|+|+++.+..... ......++.+.++
T Consensus 27 ~~~~vv~lHG~~~~~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~-------------------~~~~~~~~~~~~~ 86 (282)
T 3qvm_A 27 GEKTVLLAHGFGCDQNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESF-------------------STKRYSSLEGYAK 86 (282)
T ss_dssp SSCEEEEECCTTCCGGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGC-------------------CTTGGGSHHHHHH
T ss_pred CCCeEEEECCCCCCcchHHHHHHHHhc-CceEEEEecCCCCCCCCCCC-------------------CccccccHHHHHH
Confidence 348999999999999999999999987 99999999998765421110 0112235666677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh----------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL---------------------- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~---------------------- 175 (251)
++.++++. . +.++++|+|||+||.+++.++.++|+.+++++++++........
T Consensus 87 ~~~~~~~~---~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
T 3qvm_A 87 DVEEILVA---L--DLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKN 161 (282)
T ss_dssp HHHHHHHH---T--TCCSEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHH---c--CCCceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcc
Confidence 77777763 3 34789999999999999999999999999999999865322110
Q ss_pred ---------------------hhh--------------------------hcccCCCCCEEEEccCCCCcccchhcccch
Q 025550 176 ---------------------IDQ--------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 176 ---------------------~~~--------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
... ....+.++|+++++|++|..++.+.++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 241 (282)
T 3qvm_A 162 YIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMA 241 (282)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHH
T ss_pred hhhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHH
Confidence 000 001347899999999999999988766665
Q ss_pred HHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 209 PFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+. ..++++++++||....+..+.+.+.+.++|.
T Consensus 242 ~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 276 (282)
T 3qvm_A 242 ENIP----NSQLELIQAEGHCLHMTDAGLITPLLIHFIQ 276 (282)
T ss_dssp HHSS----SEEEEEEEEESSCHHHHCHHHHHHHHHHHHH
T ss_pred HhCC----CCcEEEecCCCCcccccCHHHHHHHHHHHHH
Confidence 5553 4699999999999876655555555555543
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.7e-23 Score=155.94 Aligned_cols=176 Identities=14% Similarity=0.178 Sum_probs=132.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+||++||++.+...|..+.+.|.+ +|.++.+|+||++.+.. +....++.+.++
T Consensus 26 ~~p~lvl~hG~~~~~~~w~~~~~~L~~-~~~vi~~D~rG~G~S~~-----------------------~~~~~~~~~~a~ 81 (266)
T 3om8_A 26 EKPLLALSNSIGTTLHMWDAQLPALTR-HFRVLRYDARGHGASSV-----------------------PPGPYTLARLGE 81 (266)
T ss_dssp TSCEEEEECCTTCCGGGGGGGHHHHHT-TCEEEEECCTTSTTSCC-----------------------CCSCCCHHHHHH
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHhhc-CcEEEEEcCCCCCCCCC-----------------------CCCCCCHHHHHH
Confidence 458899999999999999999998875 79999999998866421 111234556677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--hh--------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--SL-------------------- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~~-------------------- 175 (251)
++.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|++++...... .+
T Consensus 82 dl~~~l~---~l~--~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (266)
T 3om8_A 82 DVLELLD---ALE--VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAAGF 156 (266)
T ss_dssp HHHHHHH---HTT--CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSHHHHHHH
T ss_pred HHHHHHH---HhC--CCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHHHHHHHH
Confidence 7777777 333 45899999999999999999999999999999876322110 00
Q ss_pred ---------h-------hhh--------------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHh
Q 025550 176 ---------I-------DQF--------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213 (251)
Q Consensus 176 ---------~-------~~~--------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~ 213 (251)
. +.+ ....+++|+++++|++|.+++.+.++.+.+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~ip~ 236 (266)
T 3om8_A 157 LGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAG 236 (266)
T ss_dssp HHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT
T ss_pred HHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC
Confidence 0 000 0124789999999999999998877766666544
Q ss_pred cCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 214 AGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 214 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.++++++ +||....+..+.+.+.+.++|.
T Consensus 237 ----a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 237 ----ARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp ----CEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred ----CEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 4888888 6999988888888877777764
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-23 Score=156.85 Aligned_cols=177 Identities=15% Similarity=0.207 Sum_probs=121.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++||++++...|..+++.|.+.||.++++|+||++.++... ...+..+..+.+..
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~--------------------~~~~~~~~~~d~~~ 75 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEEL--------------------VHTGPDDWWQDVMN 75 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHH--------------------TTCCHHHHHHHHHH
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHh--------------------cCCCHHHHHHHHHH
Confidence 4679999999999999999999998889999999999876431100 01122333333444
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--hh---------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--SL--------------------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~~--------------------- 175 (251)
+.+.++ +.+ .++++|+||||||.+++.+|.++| ++++|++++...... ..
T Consensus 76 ~~~~l~---~~~--~~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (247)
T 1tqh_A 76 GYEFLK---NKG--YEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQ 148 (247)
T ss_dssp HHHHHH---HHT--CCCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHH---HcC--CCeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHH
Confidence 444444 333 358999999999999999999998 888887655332110 00
Q ss_pred ---------------hh-------hh--cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 176 ---------------ID-------QF--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 176 ---------------~~-------~~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.. .. ....+++|+++++|++|.++|++.++.+.+.+.. ...++++++++||...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~ 226 (247)
T 1tqh_A 149 IEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVIT 226 (247)
T ss_dssp HHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSGG
T ss_pred HHhhhhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC--CceEEEEeCCCceeec
Confidence 00 00 1124789999999999999999877766665543 2479999999999976
Q ss_pred HHH-H----HHHHHHHHH
Q 025550 232 NEE-L----RNLESWIKT 244 (251)
Q Consensus 232 ~~~-~----~~~~~~l~~ 244 (251)
.+. . +.+.+||.+
T Consensus 227 ~e~~~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 227 LDQEKDQLHEDIYAFLES 244 (247)
T ss_dssp GSTTHHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHh
Confidence 432 3 445555543
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.7e-24 Score=160.98 Aligned_cols=172 Identities=12% Similarity=0.051 Sum_probs=128.1
Q ss_pred CCccEEEEEecCC---CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 37 MARNFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 37 ~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
++.|+||++||++ ++...|..+++.+.+.||.++.+|+++++.. ...
T Consensus 61 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~------------------------------~~~ 110 (262)
T 2pbl_A 61 TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV------------------------------RIS 110 (262)
T ss_dssp SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS------------------------------CHH
T ss_pred CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCC------------------------------ChH
Confidence 6779999999965 6677788899999889999999999865321 123
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCCCCcchhhh----------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWVPFNASLID---------- 177 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~~~~~~~~~---------- 177 (251)
..++++.++++.+.... + ++++|+|||+||.+++.++.++ |+.++++++++|..........
T Consensus 111 ~~~~d~~~~~~~l~~~~-~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 188 (262)
T 2pbl_A 111 EITQQISQAVTAAAKEI-D-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKFKMDA 188 (262)
T ss_dssp HHHHHHHHHHHHHHHHS-C-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHHHCCCH
T ss_pred HHHHHHHHHHHHHHHhc-c-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhhhhhhhCCCH
Confidence 33445555555443211 2 6899999999999999999887 7889999999997764332111
Q ss_pred --------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 178 --------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 178 --------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
.......++|+++++|++|..++.+.++.+.+.+. +++++++|++|....+..+....++.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~~~~~~~~~~~l~~~ 259 (262)
T 2pbl_A 189 DAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNVIEPLADPESDLVAV 259 (262)
T ss_dssp HHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTTTGGGGCTTCHHHHH
T ss_pred HHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchHHhhcCCCCcHHHHH
Confidence 01123578999999999999999998888888886 6899999999998876554444444443
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-23 Score=166.77 Aligned_cols=204 Identities=12% Similarity=0.096 Sum_probs=141.9
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..+..++..+..|+.. +.+++.|+||++||++++...|..... .+.+.||.++.+|+|+++.++....
T Consensus 138 ~~i~~~~~~l~~~~~~-------~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~---- 206 (405)
T 3fnb_A 138 IEVPFEGELLPGYAII-------SEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGL---- 206 (405)
T ss_dssp EEEEETTEEEEEEEEC-------CSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTC----
T ss_pred EEEeECCeEEEEEEEc-------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCC----
Confidence 3444467777777664 234456999999999988888766443 5557899999999998876421100
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
... .+. .+++..+++.+... .++++|+|||+||.+++.++..+| +++++|+++|..
T Consensus 207 ----------------~~~-~~~---~~d~~~~~~~l~~~---~~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~ 262 (405)
T 3fnb_A 207 ----------------HFE-VDA---RAAISAILDWYQAP---TEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIY 262 (405)
T ss_dssp ----------------CCC-SCT---HHHHHHHHHHCCCS---SSCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCS
T ss_pred ----------------CCC-ccH---HHHHHHHHHHHHhc---CCCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcC
Confidence 000 111 33333334322111 178999999999999999999999 899999999866
Q ss_pred CCcchhhhh-------------------------------------------------------hcccCCCCCEEEEccC
Q 025550 170 PFNASLIDQ-------------------------------------------------------FTSDAKKTPILWSHGM 194 (251)
Q Consensus 170 ~~~~~~~~~-------------------------------------------------------~~~~~~~~p~l~~~g~ 194 (251)
......... ....++++|+++++|+
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~ 342 (405)
T 3fnb_A 263 DVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGA 342 (405)
T ss_dssp CHHHHHHHHCC------------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEET
T ss_pred CHHHHHHHhhhhhhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecC
Confidence 532211000 0023478999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCC---CCCCHH----HHHHHHHHHHHhhcCC
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLG---HSISNE----ELRNLESWIKTRMSCS 249 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~---H~~~~~----~~~~~~~~l~~~l~~~ 249 (251)
+|..++.+.++.+.+.+...+.+++++++++.. |....+ ..+.+.+||.+.++.+
T Consensus 343 ~D~~v~~~~~~~l~~~l~~~~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~k 404 (405)
T 3fnb_A 343 GEDSELMRQSQVLYDNFKQRGIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKKK 404 (405)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC--
T ss_pred CCcCCChHHHHHHHHHhccCCCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCcC
Confidence 999999999999999999988899999995544 444322 3577889999998753
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.1e-23 Score=157.80 Aligned_cols=181 Identities=14% Similarity=0.092 Sum_probs=133.8
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
+..+.|||+||++.+...|..+++.|.+.||.++++|+||++.+... .....++.+.+
T Consensus 8 ~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~a 65 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRR----------------------LDEIHTFRDYS 65 (264)
T ss_dssp -CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCC----------------------GGGCCSHHHHH
T ss_pred CCCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCC----------------------cccccCHHHHH
Confidence 45688999999999998999999999888999999999988654210 00113456667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--------hh-------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--------SL------------- 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--------~~------------- 175 (251)
+++.++++. .+ ..++++|+||||||.+++.++.++|++++++|++++..+... ..
T Consensus 66 ~dl~~~l~~---l~-~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (264)
T 2wfl_A 66 EPLMEVMAS---IP-PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQ 141 (264)
T ss_dssp HHHHHHHHH---SC-TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCE
T ss_pred HHHHHHHHH---hC-CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhh
Confidence 777777773 32 136899999999999999999999999999998876321000 00
Q ss_pred --------------------hh-hh----------------c------------c-----cCCCCCEEEEccCCCCcccc
Q 025550 176 --------------------ID-QF----------------T------------S-----DAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 176 --------------------~~-~~----------------~------------~-----~~~~~p~l~~~g~~D~~~~~ 201 (251)
.. .. . . ...++|+++++|++|..++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~ 221 (264)
T 2wfl_A 142 FSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPV 221 (264)
T ss_dssp EEEESCTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCH
T ss_pred hhhccCCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCH
Confidence 00 00 0 0 00357999999999999998
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.++.+.+.+. ..++++++++||....+..+.+.+.+.+++.
T Consensus 222 ~~~~~~~~~~p----~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 222 EFQKWFVESVG----ADKVKEIKEADHMGMLSQPREVCKCLLDISD 263 (264)
T ss_dssp HHHHHHHHHHC----CSEEEEETTCCSCHHHHSHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCC----CceEEEeCCCCCchhhcCHHHHHHHHHHHhh
Confidence 87776666664 3588999999999998888888888877764
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-23 Score=162.84 Aligned_cols=188 Identities=14% Similarity=0.143 Sum_probs=130.3
Q ss_pred CCCCccEEEEEecCCCC---CCC--chhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGDS---GPA--NEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKD 108 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~---~~~--~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~ 108 (251)
.+++.|+||++||+|.. ... |..++..|++. |+.++.+||+.++..+. +..
T Consensus 108 ~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p~~~~-----------------------~~~ 164 (365)
T 3ebl_A 108 AAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRY-----------------------PCA 164 (365)
T ss_dssp BSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THH
T ss_pred CCCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCCCCCC-----------------------cHH
Confidence 44678999999998743 222 45677777665 99999999997654210 112
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcchhhh-------
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPN-NVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNASLID------- 177 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~~~~------- 177 (251)
..|...+++++.+ +.....++|.+ +|+|+|+|+||.+++.++.+.++ .++++|+++|++........
T Consensus 165 ~~D~~~a~~~l~~--~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~ 242 (365)
T 3ebl_A 165 YDDGWTALKWVMS--QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGVKVCGNILLNAMFGGTERTESERRLDGK 242 (365)
T ss_dssp HHHHHHHHHHHHH--CTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTT
T ss_pred HHHHHHHHHHHHh--CchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCC
Confidence 2333333333321 00002267888 99999999999999999988665 79999999998754221000
Q ss_pred ----------------------------hh--cccCCC----CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 178 ----------------------------QF--TSDAKK----TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 178 ----------------------------~~--~~~~~~----~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
.+ .....+ .|+++++|++|.+++ .++.+.+.|++.|.+++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~--~~~~~~~~L~~~g~~v~l~~~ 320 (365)
T 3ebl_A 243 YFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCD--RQLAYADALREDGHHVKVVQC 320 (365)
T ss_dssp SSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCCCCEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEE
T ss_pred cccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhccCCCCCEEEEEcCcccchh--HHHHHHHHHHHCCCCEEEEEE
Confidence 00 001122 589999999997654 457899999999999999999
Q ss_pred CCCCCCCC--------HHHHHHHHHHHHHhhcCC
Q 025550 224 PGLGHSIS--------NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 224 ~g~~H~~~--------~~~~~~~~~~l~~~l~~~ 249 (251)
+|++|.+. .+..+.+.+||.++++.+
T Consensus 321 ~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 321 ENATVGFYLLPNTVHYHEVMEEISDFLNANLYYG 354 (365)
T ss_dssp TTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 99999864 134788999999998754
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-22 Score=173.86 Aligned_cols=214 Identities=12% Similarity=0.051 Sum_probs=148.1
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMP 91 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (251)
..++..+..+++.+... ..+.+.|+||++||+.+... .|......|.++||.++.+|+|+++.. +.
T Consensus 424 ~~dg~~i~~~~~~p~~~---~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~---------g~ 491 (695)
T 2bkl_A 424 SKDGTKVPMFVVHRKDL---KRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEY---------GK 491 (695)
T ss_dssp CTTSCEEEEEEEEETTC---CCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTT---------CH
T ss_pred CCCCCEEEEEEEECCCC---CCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCc---------CH
Confidence 34556666666654322 13457899999999665443 566666667778999999999976442 23
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.|..... .......++++.+.++.+. +..++.++++|+|+|+||.+++.++.++|+.++++++.+|..+
T Consensus 492 ~~~~~~~----------~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d 561 (695)
T 2bkl_A 492 AWHDAGR----------LDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLD 561 (695)
T ss_dssp HHHHTTS----------GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCC
T ss_pred HHHHhhH----------hhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccc
Confidence 3432111 0111222334444444443 3445788999999999999999999999999999999998765
Q ss_pred Ccchhh--------h---------------hhcc----cCCC--CCEEEEccCCCCcccchhcccchHHHHh---cCCee
Q 025550 171 FNASLI--------D---------------QFTS----DAKK--TPILWSHGMADRTVLFEAGQAGPPFLEQ---AGISC 218 (251)
Q Consensus 171 ~~~~~~--------~---------------~~~~----~~~~--~p~l~~~g~~D~~~~~~~~~~~~~~l~~---~~~~~ 218 (251)
...... . ...+ ...+ +|+|+++|++|..+++.+++++++.|++ .+.++
T Consensus 562 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 641 (695)
T 2bkl_A 562 MVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATA 641 (695)
T ss_dssp TTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCE
T ss_pred hhhccccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCE
Confidence 321100 0 0000 1122 6999999999999999999999999998 67889
Q ss_pred EEEEeCCCCCCCC------HHHHHHHHHHHHHhhcCC
Q 025550 219 EFKAYPGLGHSIS------NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 219 ~~~~~~g~~H~~~------~~~~~~~~~~l~~~l~~~ 249 (251)
++++++++||.+. .+....+.+||.++|+..
T Consensus 642 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 678 (695)
T 2bkl_A 642 LLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDVQ 678 (695)
T ss_dssp EEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC-
T ss_pred EEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999873 234677899999998643
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=158.70 Aligned_cols=196 Identities=16% Similarity=0.094 Sum_probs=143.1
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+..++..+..+... ++..|+||++||++++...|..+++.|. .||.++.+|+|+++.+..
T Consensus 13 ~~~~~~g~~l~~~~~g---------~~~~~~vl~lHG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~-------- 74 (299)
T 3g9x_A 13 HYVEVLGERMHYVDVG---------PRDGTPVLFLHGNPTSSYLWRNIIPHVA-PSHRCIAPDLIGMGKSDK-------- 74 (299)
T ss_dssp EEEEETTEEEEEEEES---------CSSSCCEEEECCTTCCGGGGTTTHHHHT-TTSCEEEECCTTSTTSCC--------
T ss_pred eeeeeCCeEEEEEecC---------CCCCCEEEEECCCCccHHHHHHHHHHHc-cCCEEEeeCCCCCCCCCC--------
Confidence 3445566665543332 2335789999999999999999999886 699999999998765321
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.....++.+.++++..+++. . +.++++|+|||+||.+++.+|.++|+++++++++++..+
T Consensus 75 ---------------~~~~~~~~~~~~~~~~~~~~---~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 134 (299)
T 3g9x_A 75 ---------------PDLDYFFDDHVRYLDAFIEA---L--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRP 134 (299)
T ss_dssp ---------------CCCCCCHHHHHHHHHHHHHH---T--TCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCC
T ss_pred ---------------CCCcccHHHHHHHHHHHHHH---h--CCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcc
Confidence 11134455566777776663 2 446899999999999999999999999999999985433
Q ss_pred Ccch------h-----------------------hh---------------------hhc--------------------
Q 025550 171 FNAS------L-----------------------ID---------------------QFT-------------------- 180 (251)
Q Consensus 171 ~~~~------~-----------------------~~---------------------~~~-------------------- 180 (251)
.... . .. ...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (299)
T 3g9x_A 135 FPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGE 214 (299)
T ss_dssp BSSGGGSCGGGHHHHHHHTSSSHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTB
T ss_pred hhhhhhcchHHHHHHHHHcCCCcchhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccc
Confidence 2200 0 00 000
Q ss_pred --------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 181 --------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 181 --------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
...+++|+++++|++|..++.+.++.+.+.+. .+++++++++||.+..+..+.+.+.|.+.+
T Consensus 215 ~~~~~~~~~~~~~~l~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~ 290 (299)
T 3g9x_A 215 PANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLP----NCKTVDIGPGLHYLQEDNPDLIGSEIARWL 290 (299)
T ss_dssp SHHHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHST----TEEEEEEEEESSCHHHHCHHHHHHHHHHHS
T ss_pred cchhhhhhhhhhhhcccCCCCeEEEecCCCCCCCHHHHHHHHhhCC----CCeEEEeCCCCCcchhcCHHHHHHHHHHHH
Confidence 02358999999999999999887766665553 468899999999999888888888888887
Q ss_pred cC
Q 025550 247 SC 248 (251)
Q Consensus 247 ~~ 248 (251)
..
T Consensus 291 ~~ 292 (299)
T 3g9x_A 291 PA 292 (299)
T ss_dssp GG
T ss_pred hh
Confidence 54
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-23 Score=162.70 Aligned_cols=182 Identities=20% Similarity=0.190 Sum_probs=132.7
Q ss_pred CccEEEEEecCC---CCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 38 ARNFILWLHGLG---DSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~---~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+.|+||++||++ ++.. .|..+++.|++.|+.++.+|+|+++... +. ...+....+.
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~-----~~--------------~~~~~~~~D~ 168 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE-----GH--------------HPFPSGVEDC 168 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT-----EE--------------CCTTHHHHHH
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCC-----CC--------------CCCCccHHHH
Confidence 679999999988 6666 6667788888799999999999773110 00 0012234566
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-----cCCCcceEEEeccCCCCc---------chhh--
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-----YPRKLGGGAIFSGWVPFN---------ASLI-- 176 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~p~~~~~~i~~~~~~~~~---------~~~~-- 176 (251)
..+++++.+.+. ..+.+ +|+|+|||+||.+++.++.. .|+.++++|+++|..... ....
T Consensus 169 ~~~~~~v~~~~~---~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~~~~~~~ 243 (361)
T 1jkm_A 169 LAAVLWVDEHRE---SLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTELPSL 243 (361)
T ss_dssp HHHHHHHHHTHH---HHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHH
T ss_pred HHHHHHHHhhHH---hcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccccccccccccccccCcch
Confidence 666666666555 34555 99999999999999999988 777899999999977651 0000
Q ss_pred -----------------h------------hhcc--------cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeE
Q 025550 177 -----------------D------------QFTS--------DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE 219 (251)
Q Consensus 177 -----------------~------------~~~~--------~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~ 219 (251)
. ...+ .... |+++++|++|.+++ .++.+.+.+++.+.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~ 320 (361)
T 1jkm_A 244 VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAGVDVA 320 (361)
T ss_dssp HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTCCEE
T ss_pred hhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcCCCEE
Confidence 0 0000 1233 99999999999987 67789999999999999
Q ss_pred EEEeCCCCCCCC-----------HHHHHHHHHHHHHhh
Q 025550 220 FKAYPGLGHSIS-----------NEELRNLESWIKTRM 246 (251)
Q Consensus 220 ~~~~~g~~H~~~-----------~~~~~~~~~~l~~~l 246 (251)
+++++|++|.+. .+..+.+.+||+++.
T Consensus 321 l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 321 ARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp EEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999999876 333567778877654
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-22 Score=151.46 Aligned_cols=191 Identities=18% Similarity=0.234 Sum_probs=131.3
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCC---CCCCCch-hhhhhhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLG---DSGPANE-PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
+...++..+..+...+ ..+.+.|+||++||++ ++...|. .+++.+.+. |.++.+|+|+++...
T Consensus 8 ~~~~dg~~l~~~~~~p------~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~------ 74 (275)
T 3h04_A 8 VITKDAFALPYTIIKA------KNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS------ 74 (275)
T ss_dssp EECTTSCEEEEEEECC------SSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC------
T ss_pred EecCCcEEEEEEEEcc------CCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc------
Confidence 3445666666655542 1234679999999988 5555555 677788877 999999999764321
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
....++++.+.++.+. ..++.++++|+|||+||.+++.++.+ +.++++++++|
T Consensus 75 ------------------------~~~~~~d~~~~~~~l~-~~~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~ 127 (275)
T 3h04_A 75 ------------------------LDCIIEDVYASFDAIQ-SQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYG 127 (275)
T ss_dssp ------------------------HHHHHHHHHHHHHHHH-HTTTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESC
T ss_pred ------------------------cchhHHHHHHHHHHHH-hhCCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccc
Confidence 1122333333333332 22567899999999999999999998 68999999998
Q ss_pred CCCCcchhhhh--------------------------------------------------hcc---------------c
Q 025550 168 WVPFNASLIDQ--------------------------------------------------FTS---------------D 182 (251)
Q Consensus 168 ~~~~~~~~~~~--------------------------------------------------~~~---------------~ 182 (251)
........... +.. .
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (275)
T 3h04_A 128 YSRINTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELK 207 (275)
T ss_dssp CSCSCSHHHHSCCHHHHHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHT
T ss_pred cccccccccccccchhhcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhc
Confidence 77542211000 000 2
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-------HHHHHHHHHHHHhhc
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------EELRNLESWIKTRMS 247 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~ 247 (251)
..+ |+++++|++|.+++.+.++.+.+.+ ...+++++++++|.+.. +..+.+.+||.+++.
T Consensus 208 ~~~-P~lii~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 208 TLP-PVFIAHCNGDYDVPVEESEHIMNHV----PHSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp TCC-CEEEEEETTCSSSCTHHHHHHHTTC----SSEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CEEEEecCCCCCCChHHHHHHHHhc----CCceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 234 9999999999999988766655544 34679999999998652 446888899988764
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-23 Score=165.01 Aligned_cols=205 Identities=12% Similarity=0.022 Sum_probs=136.2
Q ss_pred CCCccEEEEEecCCCCCCC-------------chhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCC
Q 025550 36 PMARNFILWLHGLGDSGPA-------------NEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEI 99 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~-------------~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~ 99 (251)
..+.|+||++||++++... |..++ +.+...||.++++|+||++.+......+.+.....+....
T Consensus 39 ~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~ 118 (377)
T 3i1i_A 39 RERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGD 118 (377)
T ss_dssp TTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSS
T ss_pred CCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCC
Confidence 3456899999999998776 77777 6777899999999999886532111111110000000000
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCcceEEE-eccCCCCcc----
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVF-VCGFSQGGALTLASVLLYPRKLGGGAI-FSGWVPFNA---- 173 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~~~~~~i~-~~~~~~~~~---- 173 (251)
.........++.+.++++.++++ ..+ .+++. |+||||||.+++.+|.++|++++++|+ +++......
T Consensus 119 --~~~~~~~~~~~~~~~~d~~~~l~---~l~--~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 191 (377)
T 3i1i_A 119 --EYAMDFPVFTFLDVARMQCELIK---DMG--IARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVN 191 (377)
T ss_dssp --BCGGGSCCCCHHHHHHHHHHHHH---HTT--CCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCCHHHHHH
T ss_pred --cccCCCCCCCHHHHHHHHHHHHH---HcC--CCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcCCchhhH
Confidence 00000012355666777777776 333 45775 999999999999999999999999999 544322000
Q ss_pred -------------------------------------------h-hhhhh------------------------------
Q 025550 174 -------------------------------------------S-LIDQF------------------------------ 179 (251)
Q Consensus 174 -------------------------------------------~-~~~~~------------------------------ 179 (251)
. +...+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (377)
T 3i1i_A 192 VAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRS 271 (377)
T ss_dssp TTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHHHHHHhhh
Confidence 0 00000
Q ss_pred ------------------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC-CCC
Q 025550 180 ------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG-LGH 228 (251)
Q Consensus 180 ------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g-~~H 228 (251)
....+++|+++++|++|.+++.+.++.+.+.+++.+..++++++++ +||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH 351 (377)
T 3i1i_A 272 IELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGH 351 (377)
T ss_dssp TTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGG
T ss_pred hcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCC
Confidence 0024678999999999999999999999999987777789999998 999
Q ss_pred CCCHHH----HHHHHHHHHHhhc
Q 025550 229 SISNEE----LRNLESWIKTRMS 247 (251)
Q Consensus 229 ~~~~~~----~~~~~~~l~~~l~ 247 (251)
....+. .+.+.+||.+.+.
T Consensus 352 ~~~~e~p~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 352 MAGVFDIHLFEKKVYEFLNRKVS 374 (377)
T ss_dssp GHHHHCGGGTHHHHHHHHHSCCS
T ss_pred cchhcCHHHHHHHHHHHHHhhhh
Confidence 876544 4556666666553
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-22 Score=173.94 Aligned_cols=211 Identities=12% Similarity=0.090 Sum_probs=143.4
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC---Cch-hhhhhh-cCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP---ANE-PIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~---~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..+..+..++..|+.+ ..+++.|+||++||++++.. .|. .+...+ ++.||.++.+|+|+++...
T Consensus 475 ~~~~~l~~~~~~P~~~---~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~-------- 543 (719)
T 1z68_A 475 VDEITLWYKMILPPQF---DRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQG-------- 543 (719)
T ss_dssp ETTEEEEEEEEECTTC---CSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSC--------
T ss_pred cCCeEEEEEEEeCCCC---CCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCc--------
Confidence 3336666666654332 13467899999999887643 343 244444 4789999999999875431
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..|..... ....... ++++.+.++.+. +..++.++++|+|||+||.+++.++.++|+.++++++++|.
T Consensus 544 -~~~~~~~~------~~~~~~~----~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~ 612 (719)
T 1z68_A 544 -DKLLYAVY------RKLGVYE----VEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPV 612 (719)
T ss_dssp -HHHHGGGT------TCTTHHH----HHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCC
T ss_pred -hhhHHHHh------hccCccc----HHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCc
Confidence 11111000 0111122 333333333333 33456789999999999999999999999999999999986
Q ss_pred CCCcc----------------hh---hhh----hcccCCCC-CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 169 VPFNA----------------SL---IDQ----FTSDAKKT-PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 169 ~~~~~----------------~~---~~~----~~~~~~~~-p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
..... .. ... ....+.++ |+|+++|++|..++++.++.+++.+++.+.++++++++
T Consensus 613 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 692 (719)
T 1z68_A 613 SSWEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMWYS 692 (719)
T ss_dssp CCTTTSBHHHHHHHHCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTCCCEEEEET
T ss_pred cChHHhccccchhhcCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCCceEEEEEC
Confidence 54321 00 000 01123455 89999999999999999999999999999999999999
Q ss_pred CCCCCCCHH----HHHHHHHHHHHhhc
Q 025550 225 GLGHSISNE----ELRNLESWIKTRMS 247 (251)
Q Consensus 225 g~~H~~~~~----~~~~~~~~l~~~l~ 247 (251)
+++|.+..+ ..+.+.+||.++|+
T Consensus 693 ~~gH~~~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 693 DQNHGLSGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp TCCTTCCTHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHhhC
Confidence 999998533 35678888887763
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-22 Score=154.14 Aligned_cols=178 Identities=15% Similarity=0.193 Sum_probs=128.4
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.|.+.||.++.+|+||++.+.. +....++.+.+++
T Consensus 22 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 78 (276)
T 1zoi_A 22 APVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQ-----------------------VWDGHDMDHYADD 78 (276)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHH
Confidence 46799999999999999999999998999999999998866421 1112345556677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCc-----------ch------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFN-----------AS------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~-----------~~------------ 174 (251)
+.++++.+ +.++++|+||||||.+++.++.++ |++++++|++++..+.. ..
T Consensus 79 ~~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T 1zoi_A 79 VAAVVAHL-----GIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASN 153 (276)
T ss_dssp HHHHHHHH-----TCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHh-----CCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHHHh
Confidence 77777743 345899999999999999988887 99999999988632110 00
Q ss_pred ------------hhh----------h-----------------------hc-------ccCCCCCEEEEccCCCCcccch
Q 025550 175 ------------LID----------Q-----------------------FT-------SDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 175 ------------~~~----------~-----------------------~~-------~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
+.. . +. ..++++|+++++|++|.+++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~ 233 (276)
T 1zoi_A 154 RAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYE 233 (276)
T ss_dssp HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccChH
Confidence 000 0 00 0137899999999999999877
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
... +.+.+.-...++++++++||....+..+.+.+-+.++|.
T Consensus 234 ~~~---~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 234 NSG---VLSAKLLPNGALKTYKGYPHGMPTTHADVINADLLAFIR 275 (276)
T ss_dssp TTH---HHHHHHSTTEEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHH---HHHHhhCCCceEEEcCCCCCchhhhCHHHHHHHHHHHhc
Confidence 432 223222235799999999999887777777776666664
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=161.39 Aligned_cols=197 Identities=15% Similarity=0.137 Sum_probs=134.2
Q ss_pred CccEEEEEecCCCCCCCch-------hhhhhhcCCCcceEEEEccCCCCCCcccCC--------------------CCcC
Q 025550 38 ARNFILWLHGLGDSGPANE-------PIKTLFTSPEFKLTKWSFPSAPNNPVTCNY--------------------GAVM 90 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------------------g~~~ 90 (251)
+.+.|||+||++.+...|. .+++.|.+.||.++.+|+|+++.+...... +.+.
T Consensus 61 ~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (328)
T 1qlw_A 61 KRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEA 140 (328)
T ss_dssp CSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCCCHHH
T ss_pred CCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceeccchhh
Confidence 4578999999999988888 488889889999999999988775432110 0000
Q ss_pred CccccccCCC----CC-CCCCCChhHHHH------------------HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHH
Q 025550 91 PSWFDIHEIP----VT-ASSPKDESSLLK------------------AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGAL 147 (251)
Q Consensus 91 ~~w~~~~~~~----~~-~~~~~~~~~~~~------------------~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~ 147 (251)
|+....++ .. .........+.+ ..+.+..+++. . ++++++|||+||.+
T Consensus 141 --~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~----~~~~lvGhS~GG~~ 211 (328)
T 1qlw_A 141 --AWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK---L----DGTVLLSHSQSGIY 211 (328)
T ss_dssp --HHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH---H----TSEEEEEEGGGTTH
T ss_pred --hhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH---h----CCceEEEECcccHH
Confidence 11100000 00 000000011222 34444444442 2 38999999999999
Q ss_pred HHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccc-----hhcccchHHHHhcCCeeEEEE
Q 025550 148 TLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLF-----EAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 148 a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~-----~~~~~~~~~l~~~~~~~~~~~ 222 (251)
++.++.++|+.+++++++++....... . .....++|+++++|++|..++. +.++.+.+.+++.|.++++++
T Consensus 212 a~~~a~~~p~~v~~~v~~~p~~~~~~~---~-~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~ 287 (328)
T 1qlw_A 212 PFQTAAMNPKGITAIVSVEPGECPKPE---D-VKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMS 287 (328)
T ss_dssp HHHHHHHCCTTEEEEEEESCSCCCCGG---G-CGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHhChhheeEEEEeCCCCCCCHH---H-HhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEE
Confidence 999999999999999999975421111 1 1123579999999999999996 888899999999888999999
Q ss_pred eCCCC-----CCCCHHH-----HHHHHHHHHHhhc
Q 025550 223 YPGLG-----HSISNEE-----LRNLESWIKTRMS 247 (251)
Q Consensus 223 ~~g~~-----H~~~~~~-----~~~~~~~l~~~l~ 247 (251)
++++| |.+..+. .+.+.+||.+.+.
T Consensus 288 ~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~ 322 (328)
T 1qlw_A 288 LPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA 322 (328)
T ss_dssp GGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC
T ss_pred cCCCCcCCCcccchhccCHHHHHHHHHHHHHhccc
Confidence 99555 9875433 5667777777664
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-23 Score=157.65 Aligned_cols=176 Identities=15% Similarity=0.228 Sum_probs=129.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.|||+||++++...|..+++.|.+.||.++++|+|+++.+... ....++.+.++++
T Consensus 24 ~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~-----------------------~~~~~~~~~~~dl 80 (279)
T 1hkh_A 24 QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKV-----------------------NTGYDYDTFAADL 80 (279)
T ss_dssp EEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCC-----------------------SSCCSHHHHHHHH
T ss_pred CcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCC-----------------------CCCCCHHHHHHHH
Confidence 45999999999999999999999889999999999988654211 1123455556777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEeccCCCCcc-----------hh------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSGWVPFNA-----------SL------------ 175 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~~~~~~~-----------~~------------ 175 (251)
.++++.+ +.+++.|+||||||.+++.+|.++|+ +++++|++++..+... ..
T Consensus 81 ~~~l~~l-----~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (279)
T 1hkh_A 81 HTVLETL-----DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDR 155 (279)
T ss_dssp HHHHHHH-----TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHhc-----CCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhh
Confidence 7777643 34689999999999999999999998 9999999987432100 00
Q ss_pred -----------hh-------hh---------------------------------cccCC---CCCEEEEccCCCCcccc
Q 025550 176 -----------ID-------QF---------------------------------TSDAK---KTPILWSHGMADRTVLF 201 (251)
Q Consensus 176 -----------~~-------~~---------------------------------~~~~~---~~p~l~~~g~~D~~~~~ 201 (251)
.. .. ....+ ++|+++++|++|..++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~ 235 (279)
T 1hkh_A 156 FAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPI 235 (279)
T ss_dssp HHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCT
T ss_pred hhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCCh
Confidence 00 00 00124 89999999999999998
Q ss_pred hhc-ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 202 EAG-QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 202 ~~~-~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+ +.+.+.+ ...++++++++||....+..+.+.+.+.+++.
T Consensus 236 ~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 236 DATARRFHQAV----PEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278 (279)
T ss_dssp TTTHHHHHHHC----TTSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC----CCeeEEEeCCCCccchhcCHHHHHHHHHHHhh
Confidence 765 4444443 34689999999999887777777777766653
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-24 Score=166.86 Aligned_cols=174 Identities=11% Similarity=0.108 Sum_probs=126.8
Q ss_pred CCCCccEEEEEecCC---CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
...+.|+||++||++ ++...|..+++.+++.||.++.+|+++++... + +....+
T Consensus 78 ~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~-----------~------------~~~~~d 134 (303)
T 4e15_A 78 TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT-----------L------------EQLMTQ 134 (303)
T ss_dssp CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC-----------H------------HHHHHH
T ss_pred CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC-----------h------------hHHHHH
Confidence 346789999999965 34455666888888899999999999765421 0 112234
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC-------CCcceEEEeccCCCCcchhh---h----
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP-------RKLGGGAIFSGWVPFNASLI---D---- 177 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-------~~~~~~i~~~~~~~~~~~~~---~---- 177 (251)
+.++++++.+..+ .++.++++|+|||+||.+++.++.+.+ +.++++++++|..+...... .
T Consensus 135 ~~~~~~~l~~~~~-----~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 209 (303)
T 4e15_A 135 FTHFLNWIFDYTE-----MTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESVNPKN 209 (303)
T ss_dssp HHHHHHHHHHHHH-----HTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTTSGGG
T ss_pred HHHHHHHHHHHhh-----hcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcccccchhh
Confidence 4444444444333 235789999999999999999887654 26999999999766432211 0
Q ss_pred ----------hhcc-----c----CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHH
Q 025550 178 ----------QFTS-----D----AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELR 236 (251)
Q Consensus 178 ----------~~~~-----~----~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~ 236 (251)
...+ . ...+|+++++|++|..++.++++.+++.+++.|.++++++++|++|+...+...
T Consensus 210 ~~~~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~~~~~~~ 287 (303)
T 4e15_A 210 ILGLNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYDHFDIIEETA 287 (303)
T ss_dssp TTCCCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETTHHHHGGG
T ss_pred hhcCCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCCchHHHHHHh
Confidence 0000 1 127899999999999999999999999999999999999999999976555443
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=146.43 Aligned_cols=167 Identities=20% Similarity=0.136 Sum_probs=119.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCc---ceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEF---KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+.|+||++||++++...|..+++.+.+.|| .++.+|+|+.+.+ ...+..+
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s---------------------------~~~~~~~ 54 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGT---------------------------NYNNGPV 54 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCC---------------------------HHHHHHH
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCc---------------------------hhhhHHH
Confidence 357899999999999999999999999998 6899999865331 1234445
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
..+++..+++. . +.++++++|||+||.+++.++.++ |+++++++++++.........-.-.....++|+++++
T Consensus 55 ~~~~~~~~~~~---~--~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~p~l~i~ 129 (181)
T 1isp_A 55 LSRFVQKVLDE---T--GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPNQKILYTSIY 129 (181)
T ss_dssp HHHHHHHHHHH---H--CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBCCCCSCTTCCCEEEEEE
T ss_pred HHHHHHHHHHH---c--CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCcccccccccCCCCCCccCCcEEEEe
Confidence 55566665553 2 456899999999999999999988 8899999999987543221000001123578999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|++|.+++.+.++ ....+++++++++|....+.. ++.+.+.++|
T Consensus 130 G~~D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~~~-~~~~~i~~fl 173 (181)
T 1isp_A 130 SSADMIVMNYLSR---------LDGARNVQIHGVGHIGLLYSS-QVNSLIKEGL 173 (181)
T ss_dssp ETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGGGCH-HHHHHHHHHH
T ss_pred cCCCccccccccc---------CCCCcceeeccCchHhhccCH-HHHHHHHHHH
Confidence 9999999987432 123588999999998754432 3444444444
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-22 Score=153.68 Aligned_cols=178 Identities=17% Similarity=0.223 Sum_probs=127.5
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+++.|.+.||.++.+|+||++.+.. +....++.+.+++
T Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 77 (275)
T 1a88_A 21 GLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQ-----------------------PSTGHDMDTYAAD 77 (275)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCC-----------------------CCCCCCHHHHHHH
Confidence 46899999999999999999999988999999999998866421 1112345555667
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCc-----------ch-h----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFN-----------AS-L---------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~-----------~~-~---------- 175 (251)
+.++++.+ +.++++|+||||||.+++.++.++ |++++++|++++..+.. .. .
T Consensus 78 l~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (275)
T 1a88_A 78 VAALTEAL-----DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAAN 152 (275)
T ss_dssp HHHHHHHH-----TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHc-----CCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHhhh
Confidence 77777642 345899999999999999888776 99999999988632210 00 0
Q ss_pred --------h-----h----------h-----------------------hc-------ccCCCCCEEEEccCCCCcccch
Q 025550 176 --------I-----D----------Q-----------------------FT-------SDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 176 --------~-----~----------~-----------------------~~-------~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
. . . +. ..++++|+++++|++|..++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 232 (275)
T 1a88_A 153 RAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPYA 232 (275)
T ss_dssp HHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCCcH
Confidence 0 0 0 00 0137899999999999999877
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
... +.+.+...+.++++++++||....+..+.+.+-+.++|.
T Consensus 233 ~~~---~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 233 DAA---PKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp TTH---HHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HHH---HHHHhhCCCcEEEEcCCCCccHHHhCHHHHHHHHHHHhh
Confidence 432 223332235799999999999887766666666666553
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=153.65 Aligned_cols=176 Identities=14% Similarity=0.108 Sum_probs=126.8
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++++...|..+++.|.+. |.++.+|+||++.+... ...++.+.++
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~------------------------~~~~~~~~a~ 69 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HNIIQVDVRNHGLSPRE------------------------PVMNYPAMAQ 69 (255)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHTTT-SCEEEECCTTSTTSCCC------------------------SCCCHHHHHH
T ss_pred CCCCEEEEcCCcccHhHHHHHHHHHHhh-CcEEEecCCCCCCCCCC------------------------CCcCHHHHHH
Confidence 4578999999999999999999988765 99999999988654210 0123445567
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC--CC-c--chh-----------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV--PF-N--ASL----------------- 175 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~--~~-~--~~~----------------- 175 (251)
++.++++. .+ .+++.|+||||||.+++.+|.++|++++++|++++.. .. . ...
T Consensus 70 dl~~~l~~---l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (255)
T 3bf7_A 70 DLVDTLDA---LQ--IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQ 144 (255)
T ss_dssp HHHHHHHH---HT--CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHH
T ss_pred HHHHHHHH---cC--CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHH
Confidence 77777773 33 4689999999999999999999999999999875321 00 0 000
Q ss_pred ----h--------------hh----------------h-------cccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 176 ----I--------------DQ----------------F-------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 176 ----~--------------~~----------------~-------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
. .. + .....++|+++++|++|..++.+.++.+.+.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~--- 221 (255)
T 3bf7_A 145 AAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQF--- 221 (255)
T ss_dssp HHHHHTTTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHC---
T ss_pred HHHHHhhhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHC---
Confidence 0 00 0 01246799999999999999877654444333
Q ss_pred CCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 215 GISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
...++++++++||....+..+.+.+.+.+++.
T Consensus 222 -~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 253 (255)
T 3bf7_A 222 -PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_dssp -TTEEECCBTTCCSCHHHHCHHHHHHHHHHHHH
T ss_pred -CCCeEEEeCCCCCccccCCHHHHHHHHHHHHh
Confidence 34799999999999887766666666666554
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-22 Score=152.92 Aligned_cols=174 Identities=14% Similarity=0.186 Sum_probs=127.3
Q ss_pred CccEEEEEecCCCCCC-CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCC--hhHHHH
Q 025550 38 ARNFILWLHGLGDSGP-ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKD--ESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~--~~~~~~ 114 (251)
..|.|||+||++++.. .|..+++.|+ .+|.++++|+||++.+... +.. ..++.+
T Consensus 24 ~~~~vvllHG~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~----------------------~~~~~~~~~~~ 80 (286)
T 2yys_A 24 EGPALFVLHGGPGGNAYVLREGLQDYL-EGFRVVYFDQRGSGRSLEL----------------------PQDPRLFTVDA 80 (286)
T ss_dssp TSCEEEEECCTTTCCSHHHHHHHGGGC-TTSEEEEECCTTSTTSCCC----------------------CSCGGGCCHHH
T ss_pred CCCEEEEECCCCCcchhHHHHHHHHhc-CCCEEEEECCCCCCCCCCC----------------------ccCcccCcHHH
Confidence 3478999999999999 8999999885 6899999999988664210 011 235666
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc---hh----------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---SL---------------- 175 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---~~---------------- 175 (251)
.++++.++++. .+ .++++|+||||||.+++.+|.++|+ ++++|++++...... ..
T Consensus 81 ~a~dl~~ll~~---l~--~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T 2yys_A 81 LVEDTLLLAEA---LG--VERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEENL 154 (286)
T ss_dssp HHHHHHHHHHH---TT--CCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHHH
T ss_pred HHHHHHHHHHH---hC--CCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHHH
Confidence 67777777773 33 4689999999999999999999999 999999987531100 00
Q ss_pred h-------------------h----------------------------hhc-------ccCCCCCEEEEccCCCCcccc
Q 025550 176 I-------------------D----------------------------QFT-------SDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 176 ~-------------------~----------------------------~~~-------~~~~~~p~l~~~g~~D~~~~~ 201 (251)
. . ... ..++++|+++++|++|..++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~ 234 (286)
T 2yys_A 155 KEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSYP 234 (286)
T ss_dssp HHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTTT
T ss_pred HHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcCCH
Confidence 0 0 000 113779999999999999998
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+ ++.+.+ +.. .++++++++||....+..+.+.+.+.+++
T Consensus 235 ~-~~~~~~-~~~----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 273 (286)
T 2yys_A 235 Y-AEEVAS-RLR----APIRVLPEAGHYLWIDAPEAFEEAFKEAL 273 (286)
T ss_dssp T-HHHHHH-HHT----CCEEEETTCCSSHHHHCHHHHHHHHHHHH
T ss_pred h-HHHHHh-CCC----CCEEEeCCCCCCcChhhHHHHHHHHHHHH
Confidence 8 777777 654 47889999999987665555544444444
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-22 Score=157.17 Aligned_cols=176 Identities=13% Similarity=0.164 Sum_probs=131.1
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|+||++||++++...|..+++.|++ +|.++.+|+|+++.+.. .....++.+.+++
T Consensus 68 ~p~vv~lhG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 123 (314)
T 3kxp_A 68 GPLMLFFHGITSNSAVFEPLMIRLSD-RFTTIAVDQRGHGLSDK-----------------------PETGYEANDYADD 123 (314)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHTTTT-TSEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHc-CCeEEEEeCCCcCCCCC-----------------------CCCCCCHHHHHHH
Confidence 67999999999999999999998886 69999999998765420 1122345555666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhh-------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF------------------- 179 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~------------------- 179 (251)
+..+++.+ +.++++++|||+||.+++.+|.++|+.+++++++++............
T Consensus 124 l~~~l~~l-----~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (314)
T 3kxp_A 124 IAGLIRTL-----ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEA 198 (314)
T ss_dssp HHHHHHHH-----TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHH
T ss_pred HHHHHHHh-----CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHH
Confidence 66666632 246899999999999999999999999999999987543221100000
Q ss_pred ---------------------------------------------------cccCCCCCEEEEccCCCCcccchhcccch
Q 025550 180 ---------------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 180 ---------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
...++++|+++++|++|.+++.+.++.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~ 278 (314)
T 3kxp_A 199 YLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTS 278 (314)
T ss_dssp HHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHH
Confidence 00137899999999999999988777666
Q ss_pred HHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 209 PFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+. .+++++++|+||.+..+..+.+.+.+.++|.
T Consensus 279 ~~~~----~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl~ 313 (314)
T 3kxp_A 279 RLRP----DLPVVVVPGADHYVNEVSPEITLKAITNFID 313 (314)
T ss_dssp HHCT----TSCEEEETTCCSCHHHHCHHHHHHHHHHHHH
T ss_pred HhCC----CceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 6553 3588999999999876666666666666653
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.9e-22 Score=171.19 Aligned_cols=212 Identities=12% Similarity=0.027 Sum_probs=142.1
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC--CCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS--GPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
.++..+..+++.+... ..+.+.|+||++||+.+. ...|......|.++|+.++.+|+|+++.. +..
T Consensus 433 ~dg~~i~~~l~~p~~~---~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~---------g~~ 500 (693)
T 3iuj_A 433 KDGTRVPLIISYRKGL---KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEY---------GQA 500 (693)
T ss_dssp TTSCEEEEEEEEESSC---CCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTT---------CHH
T ss_pred CCCcEEEEEEEecCCC---CCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCcc---------CHH
Confidence 4555666666553221 234678999999997653 34455556677789999999999976432 234
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
|...... .... ..++++.+.++.+. +..+++++++|+|+|+||.++..++.++|+.++++|+.+|..+.
T Consensus 501 ~~~~~~~------~~~~----~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~ 570 (693)
T 3iuj_A 501 WHLAGTQ------QNKQ----NVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDM 570 (693)
T ss_dssp HHHTTSG------GGTH----HHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCT
T ss_pred HHHhhhh------hcCC----CcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchh
Confidence 4332110 1111 22333333333333 34468899999999999999999999999999999999987653
Q ss_pred cchhh---------------------h---hhc----ccC-CCCC-EEEEccCCCCcccchhcccchHHHHhc---CCee
Q 025550 172 NASLI---------------------D---QFT----SDA-KKTP-ILWSHGMADRTVLFEAGQAGPPFLEQA---GISC 218 (251)
Q Consensus 172 ~~~~~---------------------~---~~~----~~~-~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~---~~~~ 218 (251)
..... . .+. ... .+.| +|+++|++|..+++.++++++++|++. +.++
T Consensus 571 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 650 (693)
T 3iuj_A 571 LRYHTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPHPQ 650 (693)
T ss_dssp TTGGGSGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSSCE
T ss_pred hhhccCCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCCCE
Confidence 21100 0 000 122 5676 999999999999999999999999998 4789
Q ss_pred EEEEeCCCCCCCCH------HHHHHHHHHHHHhhcC
Q 025550 219 EFKAYPGLGHSISN------EELRNLESWIKTRMSC 248 (251)
Q Consensus 219 ~~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~ 248 (251)
++++++++||.+.. +....+.+||.++|+.
T Consensus 651 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 686 (693)
T 3iuj_A 651 LIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGY 686 (693)
T ss_dssp EEEEEC-------CHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999998763 2356788999999864
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.4e-23 Score=153.49 Aligned_cols=177 Identities=17% Similarity=0.213 Sum_probs=130.8
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
++.|+||++||++++...|. +...+. .||.++.+|+|+++.+. .....+..+.+
T Consensus 14 ~~~~~vv~~hG~~~~~~~~~-~~~~l~-~g~~v~~~d~~g~g~s~------------------------~~~~~~~~~~~ 67 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKIFG-ELEKYL-EDYNCILLDLKGHGESK------------------------GQCPSTVYGYI 67 (245)
T ss_dssp TCSCEEEEECCTTCCGGGGT-TGGGGC-TTSEEEEECCTTSTTCC------------------------SCCCSSHHHHH
T ss_pred CCCCEEEEEeCCcccHHHHH-HHHHHH-hCCEEEEecCCCCCCCC------------------------CCCCcCHHHHH
Confidence 35689999999999999999 777776 89999999999876532 11123455556
Q ss_pred HHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCcch---hhh--------------
Q 025550 117 RNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFNAS---LID-------------- 177 (251)
Q Consensus 117 ~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~~~---~~~-------------- 177 (251)
+++.++++... +..++ +++++|||+||.+++.++.+ +|+ +++++++++....... ...
T Consensus 68 ~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (245)
T 3e0x_A 68 DNVANFITNSEVTKHQK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLE 144 (245)
T ss_dssp HHHHHHHHHCTTTTTCS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHhhhhHhhcC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcc
Confidence 67766662111 11223 89999999999999999999 999 9999999987654110 000
Q ss_pred -----------hh-------------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEE
Q 025550 178 -----------QF-------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 178 -----------~~-------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (251)
.. .....++|+++++|++|..++.+.++.+.+.+. ..+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~ 220 (245)
T 3e0x_A 145 CIGGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE----NSELK 220 (245)
T ss_dssp HHTCSCSHHHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEE
T ss_pred cccccchHHHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC----CceEE
Confidence 00 013478999999999999999887666655553 47999
Q ss_pred EeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 222 AYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 222 ~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+++++||....+..+.+.+.+.++|
T Consensus 221 ~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 221 IFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp EESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred EeCCCCcceEEecHHHHHHHHHhhC
Confidence 9999999988777777887777654
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-22 Score=145.17 Aligned_cols=167 Identities=13% Similarity=0.080 Sum_probs=121.8
Q ss_pred CccEEEEEecCCCC---CCCchh-hhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 38 ARNFILWLHGLGDS---GPANEP-IKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 38 ~~~~vv~~HG~~~~---~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+.|+||++||++++ ...|.. +++.|.+. ||.++.+|+|+... .+.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------------------~~~ 52 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------------------ARE 52 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------------------CCH
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------------------ccH
Confidence 46899999999988 466776 78888877 99999999985310 112
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh----hc-------c
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ----FT-------S 181 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~----~~-------~ 181 (251)
..++..+++ ..+. .++++|+|||+||.+++.++.++| +++++++++........... +. .
T Consensus 53 ---~~~~~~~~~---~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (194)
T 2qs9_A 53 ---SIWLPFMET---ELHC-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDENERASGYFTRPWQWEKI 123 (194)
T ss_dssp ---HHHHHHHHH---TSCC-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHHHHHTSTTSSCCCHHHH
T ss_pred ---HHHHHHHHH---HhCc-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhhhHHHhhhcccccHHHH
Confidence 233333333 2332 278999999999999999999998 99999999876432111110 00 0
Q ss_pred cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC---HHHHHHHHHHHHHhhcC
Q 025550 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS---NEELRNLESWIKTRMSC 248 (251)
Q Consensus 182 ~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~ 248 (251)
.....|+++++|++|.+++.+.++.+.+.+ . .++++++|++|.+. .+....+.+||.+....
T Consensus 124 ~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~p~~~~~~~~fl~~~~~~ 188 (194)
T 2qs9_A 124 KANCPYIVQFGSTDDPFLPWKEQQEVADRL-E----TKLHKFTDCGHFQNTEFHELITVVKSLLKVPALE 188 (194)
T ss_dssp HHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T----CEEEEESSCTTSCSSCCHHHHHHHHHHHTCCCCC
T ss_pred HhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C----CeEEEeCCCCCccchhCHHHHHHHHHHHHhhhhh
Confidence 124579999999999999999888887777 3 48899999999876 45567777888776653
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=147.84 Aligned_cols=171 Identities=15% Similarity=0.131 Sum_probs=124.7
Q ss_pred CccEEEEEecCCCCCC-Cchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 38 ARNFILWLHGLGDSGP-ANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~-~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..|+||++||++++.. .|..... .|.+.||.++.+|+|... . .++.+.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~---------------------------~---~~~~~~ 52 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPL---------------------------Q---PRLEDW 52 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTT---------------------------S---CCHHHH
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCCC---------------------------C---CCHHHH
Confidence 3578999999999988 7888664 687789999999998210 0 123444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--CcceEEEeccCCCCcchhhh--hhc--------ccC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--KLGGGAIFSGWVPFNASLID--QFT--------SDA 183 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~i~~~~~~~~~~~~~~--~~~--------~~~ 183 (251)
++++...++ . . .++++++|||+||.+++.++.++|+ ++++++++++.......... .+. ...
T Consensus 53 ~~~~~~~~~---~--~-~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (192)
T 1uxo_A 53 LDTLSLYQH---T--L-HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIE 126 (192)
T ss_dssp HHHHHTTGG---G--C-CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHHHH
T ss_pred HHHHHHHHH---h--c-cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccchhhhhhhhcCCCHHHHHh
Confidence 555544444 2 2 4789999999999999999999999 89999999987653221110 000 022
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHHHHhhcCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIKTRMSCS 249 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~~~l~~~ 249 (251)
.++|+++++|++|..++.+.++.+.+.+ +.++++++++||.+..+. ...+.+||.++++.+
T Consensus 127 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~~ 190 (192)
T 1uxo_A 127 SAKHRAVIASKDDQIVPFSFSKDLAQQI-----DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSKE 190 (192)
T ss_dssp HEEEEEEEEETTCSSSCHHHHHHHHHHT-----TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC-
T ss_pred hcCCEEEEecCCCCcCCHHHHHHHHHhc-----CceEEEeCCCcCcccccccccHHHHHHHHHHHHHHh
Confidence 4569999999999999998877666665 358899999999987543 456788888888643
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=154.74 Aligned_cols=178 Identities=16% Similarity=0.233 Sum_probs=126.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++||++++...|..+++.|.+.||.++.+|+||++.+.. +....++.+.+++
T Consensus 19 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 75 (273)
T 1a8s_A 19 GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQ-----------------------PWSGNDMDTYADD 75 (273)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCC-----------------------CCCCCCHHHHHHH
Confidence 36799999999999999999999988999999999998865421 1112345556677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCc-----------ch-h----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFN-----------AS-L---------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~-----------~~-~---------- 175 (251)
+.++++. . +.++++|+||||||.+++.++.++ |++++++|++++..+.. .. .
T Consensus 76 l~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
T 1a8s_A 76 LAQLIEH---L--DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLAD 150 (273)
T ss_dssp HHHHHHH---T--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHH---h--CCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhh
Confidence 7777763 3 346899999999999999877776 89999999988632110 00 0
Q ss_pred --------------h-h-------------------------------hhc-------ccCCCCCEEEEccCCCCcccch
Q 025550 176 --------------I-D-------------------------------QFT-------SDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 176 --------------~-~-------------------------------~~~-------~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
. . .+. ..++++|+++++|++|..++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 230 (273)
T 1a8s_A 151 RSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIE 230 (273)
T ss_dssp HHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCST
T ss_pred HHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChH
Confidence 0 0 000 0247899999999999999987
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..... +.+.-.+.++++++++||....+..+.+.+-+.++|.
T Consensus 231 ~~~~~---~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 231 ASGIA---SAALVKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp TTHHH---HHHHSTTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHH---HHHhCCCcEEEEeCCCCCcchhhCHHHHHHHHHHHHh
Confidence 43322 2222234689999999999877666666666666553
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-22 Score=152.56 Aligned_cols=178 Identities=13% Similarity=0.122 Sum_probs=132.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+||++||++++...|..+++.|.+. |.++.+|+|+++.+... ....++.+.++
T Consensus 29 ~~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~-----------------------~~~~~~~~~~~ 84 (301)
T 3kda_A 29 QGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPP-----------------------KTGYSGEQVAV 84 (301)
T ss_dssp SSSEEEEECCTTCCGGGGTTTHHHHTTT-SEEEEECCTTSTTCCCC-----------------------SSCSSHHHHHH
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCC-----------------------CCCccHHHHHH
Confidence 4578999999999999999999999877 99999999987654211 12234556667
Q ss_pred HHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch----------------------
Q 025550 118 NVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS---------------------- 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~---------------------- 174 (251)
++.++++. .+ .++ ++|+|||+||.+++.++.++|++++++|++++..+....
T Consensus 85 ~l~~~l~~---l~--~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (301)
T 3kda_A 85 YLHKLARQ---FS--PDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFAA 159 (301)
T ss_dssp HHHHHHHH---HC--SSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHHC
T ss_pred HHHHHHHH---cC--CCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhhc
Confidence 77777764 33 346 999999999999999999999999999999985321100
Q ss_pred ---hh------------hh-----------------------h--------------------------ccc--CCCCCE
Q 025550 175 ---LI------------DQ-----------------------F--------------------------TSD--AKKTPI 188 (251)
Q Consensus 175 ---~~------------~~-----------------------~--------------------------~~~--~~~~p~ 188 (251)
.. .. + ... .+++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 239 (301)
T 3kda_A 160 DDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTMT 239 (301)
T ss_dssp STTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEEE
T ss_pred CcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcce
Confidence 00 00 0 001 578999
Q ss_pred EEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCCC
Q 025550 189 LWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCSS 250 (251)
Q Consensus 189 l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~~ 250 (251)
++++|++| ++... .+.+.+....+++++++|+||....+..+.+.+.|.+++++++
T Consensus 240 l~i~G~~D--~~~~~----~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 240 LAGGGAGG--MGTFQ----LEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR 295 (301)
T ss_dssp EEECSTTS--CTTHH----HHHHHTTBSSEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSC
T ss_pred EEEecCCC--CChhH----HHHHHhhcccCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCc
Confidence 99999999 45443 3344444446899999999999999999999999999887554
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.8e-23 Score=150.66 Aligned_cols=194 Identities=14% Similarity=0.054 Sum_probs=132.5
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh--hhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP--IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
+..++..+..+...+ +.+++.|+||++||++++...|.. +++.+.+.||.++.+|+|+.+.+....
T Consensus 12 ~~~~g~~l~~~~~~p------~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~------ 79 (210)
T 1imj_A 12 IQVQGQALFFREALP------GSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA------ 79 (210)
T ss_dssp EEETTEEECEEEEEC------SSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC------
T ss_pred EeeCCeEEEEEEeCC------CCCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCC------
Confidence 344666665555432 123467999999999999988888 588899899999999999775432111
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
. .....+.. ..+++..+++. . +.++++++|||+||.+++.++..+|+.+++++++++...
T Consensus 80 -~-------------~~~~~~~~-~~~~~~~~~~~---~--~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 139 (210)
T 1imj_A 80 -A-------------PAPIGELA-PGSFLAAVVDA---L--ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICT 139 (210)
T ss_dssp -C-------------SSCTTSCC-CTHHHHHHHHH---H--TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCG
T ss_pred -C-------------cchhhhcc-hHHHHHHHHHH---h--CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcc
Confidence 0 00000100 11344444442 2 346899999999999999999999999999999998765
Q ss_pred CcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 171 FNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 171 ~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..... . .....++|+++++|++|. ++.+.++.+ +. -.+.+++.+++++|....+..+.+.+.+.+++.
T Consensus 140 ~~~~~-~--~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~----~~~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~ 207 (210)
T 1imj_A 140 DKINA-A--NYASVKTPALIVYGDQDP-MGQTSFEHL-KQ----LPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQ 207 (210)
T ss_dssp GGSCH-H--HHHTCCSCEEEEEETTCH-HHHHHHHHH-TT----SSSEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred ccccc-h--hhhhCCCCEEEEEcCccc-CCHHHHHHH-hh----CCCCCEEEecCCCcchhhcCHHHHHHHHHHHHH
Confidence 33211 1 123468999999999999 887765444 32 235799999999999765555555555555553
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=157.82 Aligned_cols=180 Identities=16% Similarity=0.161 Sum_probs=127.1
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.+.+.||.++.+|+|+++.+.... ......++.+.++
T Consensus 23 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--------------------~~~~~~~~~~~~~ 82 (279)
T 4g9e_A 23 EGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAI--------------------DPDRSYSMEGYAD 82 (279)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCS--------------------CHHHHSSHHHHHH
T ss_pred CCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCC--------------------CcccCCCHHHHHH
Confidence 55789999999999999999999866789999999999876542110 0011234556666
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------------- 178 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------------- 178 (251)
++.++++. . +.++++|+|||+||.+++.++.++|+ +.+++++++...........
T Consensus 83 ~~~~~~~~---~--~~~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (279)
T 4g9e_A 83 AMTEVMQQ---L--GIADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERD 156 (279)
T ss_dssp HHHHHHHH---H--TCCCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHH
T ss_pred HHHHHHHH---h--CCCceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHH
Confidence 77776663 2 34589999999999999999999998 77777777643322110000
Q ss_pred --------------------h-------------------------cccCCCCCEEEEccCCCCcccchhcccch-HHHH
Q 025550 179 --------------------F-------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGP-PFLE 212 (251)
Q Consensus 179 --------------------~-------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~-~~l~ 212 (251)
+ .....++|+++++|++|.+++.+.++.+. +.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 236 (279)
T 4g9e_A 157 VESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLW 236 (279)
T ss_dssp HHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBG
T ss_pred HHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCC
Confidence 0 00236899999999999999998777766 4333
Q ss_pred hcCCeeEEEEeCCCCCCCCHHHHH----HHHHHHHHhhc
Q 025550 213 QAGISCEFKAYPGLGHSISNEELR----NLESWIKTRMS 247 (251)
Q Consensus 213 ~~~~~~~~~~~~g~~H~~~~~~~~----~~~~~l~~~l~ 247 (251)
..++++++|+||....+..+ .+.+||++.-.
T Consensus 237 ----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~ 271 (279)
T 4g9e_A 237 ----EGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQ 271 (279)
T ss_dssp ----GGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHS
T ss_pred ----CCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhh
Confidence 35788999999997755544 45555555443
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-22 Score=153.24 Aligned_cols=178 Identities=16% Similarity=0.173 Sum_probs=128.5
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+++.|.+.||.++.+|+||++.+.. +....++.+.+++
T Consensus 19 g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 75 (274)
T 1a8q_A 19 GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTP-----------------------VWDGYDFDTFADD 75 (274)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCC-----------------------CCCCCcHHHHHHH
Confidence 36799999999999999999999988999999999998866421 1112345556677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCc-----------ch-h----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFN-----------AS-L---------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~-----------~~-~---------- 175 (251)
+.++++. . +.++++|+||||||.+++.++.++ |++++++|++++..+.. .. .
T Consensus 76 l~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (274)
T 1a8q_A 76 LNDLLTD---L--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTE 150 (274)
T ss_dssp HHHHHHH---T--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHH---c--CCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhcc
Confidence 7777763 3 346899999999999999887776 89999999988632110 00 0
Q ss_pred ------------hh-h--------------------------------h-------cccCCCCCEEEEccCCCCcccchh
Q 025550 176 ------------ID-Q--------------------------------F-------TSDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 176 ------------~~-~--------------------------------~-------~~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
.. . + ...++++|+++++|++|.+++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 230 (274)
T 1a8q_A 151 RSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDA 230 (274)
T ss_dssp HHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGG
T ss_pred HHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHH
Confidence 00 0 0 012478999999999999999774
Q ss_pred cccchHHHHhcCCeeEEEEeCCCCCCCCHH--HHHHHHHHHHHhhc
Q 025550 204 GQAGPPFLEQAGISCEFKAYPGLGHSISNE--ELRNLESWIKTRMS 247 (251)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~--~~~~~~~~l~~~l~ 247 (251)
.. +.+.+.....++++++++||....+ ..+.+.+-+.++|.
T Consensus 231 ~~---~~~~~~~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 231 TG---RKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp TH---HHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred HH---HHHHhhCCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 32 2232322357899999999998877 77777777777664
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=157.64 Aligned_cols=178 Identities=16% Similarity=0.110 Sum_probs=130.6
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..|+||++||++++...|..+++.|.+ ||.++.+|+|++ +.+.. .....+..+.+
T Consensus 66 ~~~~vv~lHG~~~~~~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~-----------------------~~~~~~~~~~~ 121 (306)
T 2r11_A 66 DAPPLVLLHGALFSSTMWYPNIADWSS-KYRTYAVDIIGDKNKSIP-----------------------ENVSGTRTDYA 121 (306)
T ss_dssp TSCEEEEECCTTTCGGGGTTTHHHHHH-HSEEEEECCTTSSSSCEE-----------------------CSCCCCHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEecCCCCCCCCCC-----------------------CCCCCCHHHHH
Confidence 458899999999999999999988876 999999999987 43211 11123445556
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------------------- 177 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------------------- 177 (251)
+++.++++ .. +.++++|+|||+||.+++.+|.++|++++++|++++..........
T Consensus 122 ~~l~~~l~---~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (306)
T 2r11_A 122 NWLLDVFD---NL--GIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETFLN 196 (306)
T ss_dssp HHHHHHHH---HT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHHHH
T ss_pred HHHHHHHH---hc--CCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHHHH
Confidence 66766666 33 3468999999999999999999999999999999986543211000
Q ss_pred ----------------------------hh--------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcC
Q 025550 178 ----------------------------QF--------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG 215 (251)
Q Consensus 178 ----------------------------~~--------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 215 (251)
.+ ....+++|+++++|++|.+++.+.+..+.+.+ .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~ 273 (306)
T 2r11_A 197 WMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSF---V 273 (306)
T ss_dssp HHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHH---S
T ss_pred HhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHH---C
Confidence 00 01236789999999999999987654333322 2
Q ss_pred CeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 216 ISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 216 ~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+++++++++||....+..+.+.+.|.++|.
T Consensus 274 ~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 274 PDIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp TTCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 35799999999999887777777777777664
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=159.25 Aligned_cols=168 Identities=20% Similarity=0.243 Sum_probs=127.3
Q ss_pred CCCccEEEEEecCC---CCCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLG---DSGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~---~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..+.|+||++||+| ++...|..+++.++ ..|+.++.+|+|++|.++. +....+
T Consensus 76 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~-----------------------p~~~~d 132 (311)
T 1jji_A 76 KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKF-----------------------PAAVYD 132 (311)
T ss_dssp SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCT-----------------------THHHHH
T ss_pred CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCC-----------------------CCcHHH
Confidence 35679999999998 77778888888887 5799999999998876421 223456
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCCCCcchhh-----------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWVPFNASLI----------- 176 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~~~~~~~~----------- 176 (251)
+.++++++.+.++ ..+++.++++|+|||+||.+++.++.+.++. ++++++++|.........
T Consensus 133 ~~~~~~~l~~~~~---~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 209 (311)
T 1jji_A 133 CYDATKWVAENAE---ELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWI 209 (311)
T ss_dssp HHHHHHHHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSSCSS
T ss_pred HHHHHHHHHhhHH---HhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHHhcCCCcc
Confidence 6666666666555 4567778999999999999999999887765 999999998765321100
Q ss_pred ----------h---------------hh-cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 177 ----------D---------------QF-TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 177 ----------~---------------~~-~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
. .+ .......|+++++|+.|.+++ .++.+.+.+++.+.++++++++|++|.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~li~~G~~D~l~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~~ 287 (311)
T 1jji_A 210 LDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLRD--EGEVFGQMLRRAGVEASIVRYRGVLHGF 287 (311)
T ss_dssp CCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTHH--HHHHHHHHHHHTTCCEEEEEEEEEETTG
T ss_pred CCHHHHHHHHHHhCCCCccCCCcccCcccccccCCChheEEEcCcCcchH--HHHHHHHHHHHcCCCEEEEEECCCCeec
Confidence 0 00 001123699999999999874 5667889999999999999999999987
Q ss_pred C
Q 025550 231 S 231 (251)
Q Consensus 231 ~ 231 (251)
.
T Consensus 288 ~ 288 (311)
T 1jji_A 288 I 288 (311)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.8e-23 Score=156.75 Aligned_cols=179 Identities=13% Similarity=0.150 Sum_probs=130.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++.+...|..+++.|.+.||.++++|+||++.+... .....++.+.+++
T Consensus 4 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~----------------------~~~~~~~~~~a~d 61 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRK----------------------IEELRTLYDYTLP 61 (273)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCC----------------------GGGCCSHHHHHHH
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccC----------------------cccccCHHHHHHH
Confidence 478999999999998999999999888999999999988664210 0011345666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--------hh---------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--------SL--------------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--------~~--------------- 175 (251)
+.++++ ..+ ..++++|+||||||.+++.+|.++|++++++|++++..+... ..
T Consensus 62 l~~~l~---~l~-~~~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (273)
T 1xkl_A 62 LMELME---SLS-ADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFL 137 (273)
T ss_dssp HHHHHH---TSC-SSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEE
T ss_pred HHHHHH---Hhc-cCCCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHh
Confidence 777776 332 136899999999999999999999999999998876421100 00
Q ss_pred ------------------hh-h---------------h-cc-----------------cCCCCCEEEEccCCCCcccchh
Q 025550 176 ------------------ID-Q---------------F-TS-----------------DAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 176 ------------------~~-~---------------~-~~-----------------~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
.. . . .. ...++|+++++|++|..++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~ 217 (273)
T 1xkl_A 138 PYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEF 217 (273)
T ss_dssp ECSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHH
T ss_pred hccCCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHH
Confidence 00 0 0 00 0135799999999999999887
Q ss_pred cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 204 GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++.+.+.+.. .++++++++||....+..+.+.+.|.++++
T Consensus 218 ~~~~~~~~p~----~~~~~i~~aGH~~~~e~P~~~~~~i~~fl~ 257 (273)
T 1xkl_A 218 QRWQIDNIGV----TEAIEIKGADHMAMLCEPQKLCASLLEIAH 257 (273)
T ss_dssp HHHHHHHHCC----SEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC----CeEEEeCCCCCCchhcCHHHHHHHHHHHHH
Confidence 7666666543 488999999999887776666666666554
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.7e-22 Score=156.03 Aligned_cols=187 Identities=16% Similarity=0.137 Sum_probs=132.6
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.|.+.||.++++|+||++.+.... . ......++.+.+++
T Consensus 31 g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~--------~-----------~~~~~~~~~~~a~d 91 (328)
T 2cjp_A 31 GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAP--------L-----------NDPSKFSILHLVGD 91 (328)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCC--------T-----------TCGGGGSHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcC--------c-----------CCcccccHHHHHHH
Confidence 3789999999999999999999998889999999999886642110 0 00112346666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC-----cc--------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF-----NA-------------------- 173 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~-----~~-------------------- 173 (251)
+.++++.+ +.+.++++|+||||||.+++.+|.++|++++++|++++.... ..
T Consensus 92 l~~~l~~l---~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (328)
T 2cjp_A 92 VVALLEAI---APNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVP 168 (328)
T ss_dssp HHHHHHHH---CTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHHTSST
T ss_pred HHHHHHHh---cCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHHhhhCC
Confidence 77777743 312568999999999999999999999999999998753210 00
Q ss_pred -----hhhh---------hh------------------------------------------------------------
Q 025550 174 -----SLID---------QF------------------------------------------------------------ 179 (251)
Q Consensus 174 -----~~~~---------~~------------------------------------------------------------ 179 (251)
.... .+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (328)
T 2cjp_A 169 GEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPIN 248 (328)
T ss_dssp THHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHTHHHH
T ss_pred CcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHhcccc
Confidence 0000 00
Q ss_pred -------cccCCCCCEEEEccCCCCcccchhcccch--HHHHhcCCee-EEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 180 -------TSDAKKTPILWSHGMADRTVLFEAGQAGP--PFLEQAGISC-EFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 180 -------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~--~~l~~~~~~~-~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
....+++|+++++|++|..++...++... +.+.+.-... ++++++++||....+..+.+.+.|.++|.
T Consensus 249 ~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 326 (328)
T 2cjp_A 249 WELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQERPHEISKHIYDFIQ 326 (328)
T ss_dssp HHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHHSHHHHHHHHHHHHT
T ss_pred hhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchhCHHHHHHHHHHHHH
Confidence 01236799999999999999875432222 3444433345 78899999999887777777777777764
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-22 Score=162.19 Aligned_cols=179 Identities=17% Similarity=0.231 Sum_probs=129.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+|||+||++++...|..+++.|.+.||.++.+|+|+++.+.. .....++.+.++
T Consensus 23 ~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~-----------------------~~~~~s~~~~a~ 79 (456)
T 3vdx_A 23 TGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQ-----------------------PTTGYDYDTFAA 79 (456)
T ss_dssp SSEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCC-----------------------CCCCCCHHHHHH
Confidence 458899999999999999999999988999999999998765421 112234556677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCcchhh--------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFNASLI-------------------- 176 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~~~~~-------------------- 176 (251)
++.++++.+ +.++++|+|||+||.+++.++..+ |+.+++++++++..+......
T Consensus 80 dl~~~l~~l-----~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (456)
T 3vdx_A 80 DLNTVLETL-----DLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 154 (456)
T ss_dssp HHHHHHHHH-----TCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHh-----CCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHHHHHhhh
Confidence 777777643 456899999999999999888887 889999999998653211000
Q ss_pred ------------hh-------------------------------------------hcccCCCCCEEEEccCCCCcccc
Q 025550 177 ------------DQ-------------------------------------------FTSDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 177 ------------~~-------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~ 201 (251)
.. .....+++|+++++|++|.+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp~ 234 (456)
T 3vdx_A 155 ADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPI 234 (456)
T ss_dssp HCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSCG
T ss_pred ccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcCH
Confidence 00 00124688999999999999998
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----HHHHHHHHHHhhc
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----LRNLESWIKTRMS 247 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~ 247 (251)
+.. .+.+.+...++++++++++||.+..+. .+.+.+||.+.++
T Consensus 235 ~~~---~~~l~~~~~~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 235 ENT---ARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp GGT---HHHHHHHCTTSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHH---HHHHHHHCCCceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhhc
Confidence 732 233333334579999999999876443 4556677766553
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=159.61 Aligned_cols=124 Identities=12% Similarity=0.090 Sum_probs=91.2
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
+..++..+..+... +.++..|+||++||++++...|..+++.|.+.||.++.+|+|+++.+....
T Consensus 8 ~~~~g~~l~y~~~G-------~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~-------- 72 (356)
T 2e3j_A 8 LNCRGTRIHAVADS-------PPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR-------- 72 (356)
T ss_dssp EEETTEEEEEEEEC-------CTTCCSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCC--------
T ss_pred EccCCeEEEEEEec-------CCCCCCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC--------
Confidence 34456665544333 112346899999999999999999999998889999999999875532100
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
.....++.+.++++.++++. . +.++++|+|||+||.+++.++.++|++++++|++++..
T Consensus 73 -------------~~~~~~~~~~~~~~~~~~~~---l--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 73 -------------VQKAYRIKELVGDVVGVLDS---Y--GAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp -------------SGGGGSHHHHHHHHHHHHHH---T--TCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred -------------cccccCHHHHHHHHHHHHHH---c--CCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 00123455666777776663 2 45689999999999999999999999999999988654
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.6e-23 Score=164.77 Aligned_cols=189 Identities=16% Similarity=0.132 Sum_probs=132.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhc----CCCc---ceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFT----SPEF---KLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~----~~g~---~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
.+.|+||++||++++...|..+++.|. ..|| .++.+|+|+++.+...... .....
T Consensus 50 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~------------------~~~~~ 111 (398)
T 2y6u_A 50 ATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRG------------------RLGTN 111 (398)
T ss_dssp CEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTT------------------TBCSC
T ss_pred CCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCcc------------------ccCCC
Confidence 445899999999999999999999887 4488 9999999987543211000 00112
Q ss_pred hHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc---------------
Q 025550 110 SSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--------------- 173 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--------------- 173 (251)
.++.+.++++.++++... ...++.++++|+||||||.+++.+|.++|+.++++|++++......
T Consensus 112 ~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 191 (398)
T 2y6u_A 112 FNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQ 191 (398)
T ss_dssp CCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCCSCCCTTCCTTCCC
T ss_pred CCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccccccccccccccccc
Confidence 345555677777776421 0123444599999999999999999999999999999988654310
Q ss_pred ---hh---------------------------h--------hh-------------------------------------
Q 025550 174 ---SL---------------------------I--------DQ------------------------------------- 178 (251)
Q Consensus 174 ---~~---------------------------~--------~~------------------------------------- 178 (251)
.. . ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (398)
T 2y6u_A 192 IPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQT 271 (398)
T ss_dssp CCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHHHHHTTSCGGG
T ss_pred cchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchhhhhhhccccc
Confidence 00 0 00
Q ss_pred ------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----HHHHHHHHHHhhc
Q 025550 179 ------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----LRNLESWIKTRMS 247 (251)
Q Consensus 179 ------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~ 247 (251)
-....+++|+++++|++|.+++++.++.+.+.+. ..++++++|+||....+. .+.+.+||.+++.
T Consensus 272 ~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 346 (398)
T 2y6u_A 272 FAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIPGGSHLVNVEAPDLVIERINHHIHEFVL 346 (398)
T ss_dssp THHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeCCCCccchhcCHHHHHHHHHHHHHHHHH
Confidence 0012368999999999999999887665555443 578999999999876543 4556677776664
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.8e-22 Score=151.56 Aligned_cols=168 Identities=15% Similarity=0.200 Sum_probs=123.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++||++++...|..+++.|. .||.++.+|+|+++.+... ...++.+.+++
T Consensus 23 ~~~vv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~------------------------~~~~~~~~~~~ 77 (262)
T 3r0v_A 23 GPPVVLVGGALSTRAGGAPLAERLA-PHFTVICYDRRGRGDSGDT------------------------PPYAVEREIED 77 (262)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHT-TTSEEEEECCTTSTTCCCC------------------------SSCCHHHHHHH
T ss_pred CCcEEEECCCCcChHHHHHHHHHHh-cCcEEEEEecCCCcCCCCC------------------------CCCCHHHHHHH
Confidence 4679999999999999999999998 8999999999987654211 12345666677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh-------h---------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL-------I--------------- 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~-------~--------------- 176 (251)
+.++++. . + ++++++|||+||.+++.++.++| ++++++++++........ .
T Consensus 78 ~~~~~~~---l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (262)
T 3r0v_A 78 LAAIIDA---A--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRGDA 150 (262)
T ss_dssp HHHHHHH---T--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHh---c--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchhhH
Confidence 7777763 3 3 68999999999999999999999 999999998855432110 0
Q ss_pred -----hh------------------------------------------hcccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 177 -----DQ------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 177 -----~~------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
.. ......++|+++++|++|..++.+.++.+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~ 230 (262)
T 3r0v_A 151 VTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQELAD 230 (262)
T ss_dssp HHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHHHH
Confidence 00 0012468999999999999999887666665
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHH-HHHHHHHH
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEE-LRNLESWI 242 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l 242 (251)
.+. ..++++++++||....+. .+.+.+||
T Consensus 231 ~~~----~~~~~~~~~~gH~~~p~~~~~~i~~fl 260 (262)
T 3r0v_A 231 TIP----NARYVTLENQTHTVAPDAIAPVLVEFF 260 (262)
T ss_dssp HST----TEEEEECCCSSSSCCHHHHHHHHHHHH
T ss_pred hCC----CCeEEEecCCCcccCHHHHHHHHHHHH
Confidence 553 368999999999544333 23344444
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-22 Score=171.15 Aligned_cols=211 Identities=11% Similarity=0.040 Sum_probs=139.6
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
.++..+..+++.+... +.+.|+||++||+++... .|......|.++||.++.+|+|+++.. +..
T Consensus 469 ~dg~~i~~~~~~p~~~-----~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~---------g~~ 534 (741)
T 1yr2_A 469 KDGTKVPMFIVRRKDA-----KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEY---------GDA 534 (741)
T ss_dssp TTSCEEEEEEEEETTC-----CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTT---------HHH
T ss_pred CCCCEEEEEEEecCCC-----CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCC---------CHH
Confidence 3555666665543211 457899999999876544 455556678889999999999976442 233
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
|...... .... ...+++.+.++.+. +..++.++++|+|+|+||.++..++.++|+.++++|+.+|....
T Consensus 535 ~~~~~~~------~~~~----~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~ 604 (741)
T 1yr2_A 535 WHDAGRR------DKKQ----NVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDM 604 (741)
T ss_dssp HHHTTSG------GGTH----HHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCT
T ss_pred HHHhhhh------hcCC----CcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCcccc
Confidence 4321110 1111 22333333344333 33358899999999999999999999999999999999986543
Q ss_pred cchh--------h---------------hhhc----ccC-CC-CCEEEEccCCCCcccchhcccchHHHHh---cCCeeE
Q 025550 172 NASL--------I---------------DQFT----SDA-KK-TPILWSHGMADRTVLFEAGQAGPPFLEQ---AGISCE 219 (251)
Q Consensus 172 ~~~~--------~---------------~~~~----~~~-~~-~p~l~~~g~~D~~~~~~~~~~~~~~l~~---~~~~~~ 219 (251)
.... . .... ... .+ .|+|+++|++|..+++..++++++.|++ .|.+++
T Consensus 605 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~ 684 (741)
T 1yr2_A 605 LRFDQFTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHL 684 (741)
T ss_dssp TSGGGSTTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEE
T ss_pred ccccCCCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEE
Confidence 2100 0 0000 111 34 4999999999999999999999999999 888999
Q ss_pred EEEeCCCCCCCCH------HHHHHHHHHHHHhhcCC
Q 025550 220 FKAYPGLGHSISN------EELRNLESWIKTRMSCS 249 (251)
Q Consensus 220 ~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~~ 249 (251)
+++++++||.+.. +....+.+||.++|+..
T Consensus 685 l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 720 (741)
T 1yr2_A 685 IRIETRAGHGSGKPIDKQIEETADVQAFLAHFTGLT 720 (741)
T ss_dssp EEEC---------CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999998653 34678899999998643
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-23 Score=165.30 Aligned_cols=187 Identities=13% Similarity=0.105 Sum_probs=125.1
Q ss_pred CCCccEEEEEecCCCC---CCC--chhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGDS---GPA--NEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~---~~~--~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+.+.|+||++||++.. ... |..++..|+ +.|+.++.+|+|+++..+. +...
T Consensus 80 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-----------------------~~~~ 136 (338)
T 2o7r_A 80 SAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRL-----------------------PAAY 136 (338)
T ss_dssp SCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTCT-----------------------THHH
T ss_pred CCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCCC-----------------------chHH
Confidence 4577999999998743 222 667777776 7899999999998654210 1122
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC--------CcceEEEeccCCCCcchhhh----
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--------KLGGGAIFSGWVPFNASLID---- 177 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--------~~~~~i~~~~~~~~~~~~~~---- 177 (251)
.++.++++++.+..+.++...++.++++|+|||+||.+++.++.++|+ .++++|+++++.........
T Consensus 137 ~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~ 216 (338)
T 2o7r_A 137 DDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRL 216 (338)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHHHHHT
T ss_pred HHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChhhhcc
Confidence 333333333332111011122456899999999999999999999887 89999999987643211000
Q ss_pred ----------------------------hhcc-------------cCCCCCEEEEccCCCCcccchhcccchHHHHhcCC
Q 025550 178 ----------------------------QFTS-------------DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216 (251)
Q Consensus 178 ----------------------------~~~~-------------~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~ 216 (251)
.... ....+|+|+++|++|.+++ .++.+.+.+++.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~~~~~~~l~~~~~ 294 (338)
T 2o7r_A 217 ANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQMELAERLEKKGV 294 (338)
T ss_dssp TTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH--HHHHHHHHHHHTTC
T ss_pred CCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH--HHHHHHHHHHHCCC
Confidence 0000 0133499999999999887 44678899999888
Q ss_pred eeEEEEeCCCCCCCCH-------HHHHHHHHHHHHhhc
Q 025550 217 SCEFKAYPGLGHSISN-------EELRNLESWIKTRMS 247 (251)
Q Consensus 217 ~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~ 247 (251)
++++++++|++|.+.. +..+.+.+||.+.+.
T Consensus 295 ~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~ 332 (338)
T 2o7r_A 295 DVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCT 332 (338)
T ss_dssp EEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC----
T ss_pred cEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcc
Confidence 9999999999997642 335677788877664
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=151.62 Aligned_cols=183 Identities=11% Similarity=0.131 Sum_probs=125.5
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|.||++||++++...|..+++.|.+ ||.++.+|+|+++.+...... ......+..+.++
T Consensus 32 ~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~------------------~~~~~~~~~~~~~ 92 (306)
T 3r40_A 32 DGPPLLLLHGFPQTHVMWHRVAPKLAE-RFKVIVADLPGYGWSDMPESD------------------EQHTPYTKRAMAK 92 (306)
T ss_dssp CSSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCC------------------TTCGGGSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCC------------------cccCCCCHHHHHH
Confidence 447899999999999999999999987 999999999988664211100 0001345666677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-------------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN------------------------- 172 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~------------------------- 172 (251)
++.++++. . +.++++|+|||+||.+++.+|.++|++++++|++++.....
T Consensus 93 ~~~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (306)
T 3r40_A 93 QLIEAMEQ---L--GHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPAPL 167 (306)
T ss_dssp HHHHHHHH---T--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCTTH
T ss_pred HHHHHHHH---h--CCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhcccch
Confidence 77777763 3 34689999999999999999999999999999998632100
Q ss_pred ------------------------------chhhhh----h-----------------------------cccCCCCCEE
Q 025550 173 ------------------------------ASLIDQ----F-----------------------------TSDAKKTPIL 189 (251)
Q Consensus 173 ------------------------------~~~~~~----~-----------------------------~~~~~~~p~l 189 (251)
...... + ....+++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 247 (306)
T 3r40_A 168 PENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVPML 247 (306)
T ss_dssp HHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSCEE
T ss_pred HHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCcceE
Confidence 000000 0 0145789999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
+++|++|.+++..... +.+++.....+++++ ++||....+..+.+.+.|.++|+.
T Consensus 248 ii~g~~D~~~~~~~~~---~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 302 (306)
T 3r40_A 248 ALWGASGIAQSAATPL---DVWRKWASDVQGAPI-ESGHFLPEEAPDQTAEALVRFFSA 302 (306)
T ss_dssp EEEETTCC------CH---HHHHHHBSSEEEEEE-SSCSCHHHHSHHHHHHHHHHHHHC
T ss_pred EEEecCCcccCchhHH---HHHHhhcCCCeEEEe-cCCcCchhhChHHHHHHHHHHHHh
Confidence 9999999998855332 333333345677777 579998877777777666666654
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=158.91 Aligned_cols=183 Identities=16% Similarity=0.117 Sum_probs=125.6
Q ss_pred CCCccEEEEEecCCC---CCCC--chhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 36 PMARNFILWLHGLGD---SGPA--NEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~--~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
+.+.|+||++||+|. +... |..+++.|+ +.|+.++.+|+|+++.... +...
T Consensus 110 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~~-----------------------~~~~ 166 (351)
T 2zsh_A 110 GDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPY-----------------------PCAY 166 (351)
T ss_dssp SSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THHH
T ss_pred CCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCCCC-----------------------chhH
Confidence 457799999999764 2233 667778787 7899999999998654210 1112
Q ss_pred hHHHHHHHHHHHHHHHH-HHcCCCCC-cEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcchhh--------
Q 025550 110 SSLLKAVRNVHAMIDKE-VAAGIDPN-NVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNASLI-------- 176 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~-~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~~~-------- 176 (251)
.++.++++++.+ .. ...+++.+ +++|+|||+||.+++.++.++|+ .++++++++++........
T Consensus 167 ~D~~~~~~~l~~---~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~ 243 (351)
T 2zsh_A 167 DDGWIALNWVNS---RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFGGNERTESEKSLDGK 243 (351)
T ss_dssp HHHHHHHHHHHT---CGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCCCSSCCHHHHHHTTT
T ss_pred HHHHHHHHHHHh---CchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccCCCcCChhhhhcCCC
Confidence 333333333322 10 12357888 99999999999999999999987 8999999998764321100
Q ss_pred ------------hhhc-----------------cc---CCCC-CEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 177 ------------DQFT-----------------SD---AKKT-PILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 177 ------------~~~~-----------------~~---~~~~-p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
..+. .. .+.+ |+++++|++|.+++ .++.+.+.+++.+.+++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~~~~~~~~ 321 (351)
T 2zsh_A 244 YFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQEVKLMHL 321 (351)
T ss_dssp SSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTCCEEEEEE
T ss_pred cccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCCCEEEEEE
Confidence 0000 00 1234 99999999999876 556788999999989999999
Q ss_pred CCCCCCCCH----HHHHHHHHHHHHhh
Q 025550 224 PGLGHSISN----EELRNLESWIKTRM 246 (251)
Q Consensus 224 ~g~~H~~~~----~~~~~~~~~l~~~l 246 (251)
+|++|.+.. +..+.+.+-+.++|
T Consensus 322 ~g~gH~~~~~~~~~~~~~~~~~i~~Fl 348 (351)
T 2zsh_A 322 EKATVGFYLLPNNNHFHNVMDEISAFV 348 (351)
T ss_dssp TTCCTTTTSSSCSHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCHHHHHHHHHHHHHh
Confidence 999998764 44444444444444
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.9e-22 Score=157.96 Aligned_cols=195 Identities=14% Similarity=0.076 Sum_probs=134.6
Q ss_pred CccEEEEEecCCCCCC-------------Cchhhhh---hhcCCCcceEEEEccC--CCCCCcccCCCCcCCccccccCC
Q 025550 38 ARNFILWLHGLGDSGP-------------ANEPIKT---LFTSPEFKLTKWSFPS--APNNPVTCNYGAVMPSWFDIHEI 99 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~-------------~~~~~~~---~~~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~w~~~~~~ 99 (251)
..|+|||+||++++.. .|..++. .+.+.||.++.+|+|+ .+.+............|..
T Consensus 45 ~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~---- 120 (366)
T 2pl5_A 45 KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGS---- 120 (366)
T ss_dssp SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGG----
T ss_pred CCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccC----
Confidence 4689999999999887 6777774 4667899999999998 4443110000000000000
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch----
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNV-FVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS---- 174 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~---- 174 (251)
.....++.+.++++.++++. . +.+++ +|+|||+||.+++.+|.++|++++++|++++.......
T Consensus 121 ------~~~~~~~~~~~~dl~~~l~~---l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 189 (366)
T 2pl5_A 121 ------RFPFVSIQDMVKAQKLLVES---L--GIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAF 189 (366)
T ss_dssp ------GSCCCCHHHHHHHHHHHHHH---T--TCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHH
T ss_pred ------CCCcccHHHHHHHHHHHHHH---c--CCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchh
Confidence 00123555666777776663 3 34688 89999999999999999999999999999885432100
Q ss_pred --------------------------------------------hhhh--------------------------------
Q 025550 175 --------------------------------------------LIDQ-------------------------------- 178 (251)
Q Consensus 175 --------------------------------------------~~~~-------------------------------- 178 (251)
+...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (366)
T 2pl5_A 190 NEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRF 269 (366)
T ss_dssp HHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCC
T ss_pred hHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhccc
Confidence 0000
Q ss_pred -----------h-------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe-CCCCCCCCHH
Q 025550 179 -----------F-------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY-PGLGHSISNE 233 (251)
Q Consensus 179 -----------~-------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~-~g~~H~~~~~ 233 (251)
+ ....+++|+++++|++|.+++.+.++.+.+.+...+...+++++ +++||....+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 349 (366)
T 2pl5_A 270 DANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDSFLL 349 (366)
T ss_dssp CHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGGGGS
T ss_pred ChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCCcchhhc
Confidence 0 11346789999999999999999999999999876656899999 8999998765
Q ss_pred HHHHHHHHHHHhhc
Q 025550 234 ELRNLESWIKTRMS 247 (251)
Q Consensus 234 ~~~~~~~~l~~~l~ 247 (251)
..+.+.+.+.++|.
T Consensus 350 ~p~~~~~~i~~fl~ 363 (366)
T 2pl5_A 350 KNPKQIEILKGFLE 363 (366)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHc
Confidence 55555555555554
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=159.80 Aligned_cols=177 Identities=15% Similarity=0.152 Sum_probs=130.8
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+||++||++++...|..++..+ ||.++.+|+|+.+.+... .....+..+.++
T Consensus 80 ~~~~vv~~hG~~~~~~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~----------------------~~~~~~~~~~a~ 134 (330)
T 3p2m_A 80 SAPRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWR----------------------EDGNYSPQLNSE 134 (330)
T ss_dssp SCCSEEEECCTTCCGGGGHHHHHHS---CCCEEEECCTTSTTSCCC----------------------SSCBCCHHHHHH
T ss_pred CCCeEEEECCCCCccchHHHHHHHc---CCeEEEEcCCCCCCCCCC----------------------CCCCCCHHHHHH
Confidence 3578999999999999998888777 899999999987553210 112234555667
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----------------------ch
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----------------------AS 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----------------------~~ 174 (251)
++.++++. . +.++++|+|||+||.+++.+|.++|+.++++|++++..... ..
T Consensus 135 dl~~~l~~---l--~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (330)
T 3p2m_A 135 TLAPVLRE---L--APGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPS 209 (330)
T ss_dssp HHHHHHHH---S--STTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSC
T ss_pred HHHHHHHH---h--CCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccC
Confidence 77777763 3 35689999999999999999999999999999998632100 00
Q ss_pred hhh-------------------h------------------------------hcccCCCCCEEEEccCCCCcccchhcc
Q 025550 175 LID-------------------Q------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 175 ~~~-------------------~------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
... . -....+++|+++++|++|.+++.+.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~ 289 (330)
T 3p2m_A 210 FQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTA 289 (330)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHH
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHH
Confidence 000 0 001236899999999999999988766
Q ss_pred cchHHHHhcCCeeE-EEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 206 AGPPFLEQAGISCE-FKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 206 ~~~~~l~~~~~~~~-~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.+.+.+. ..+ +++++|+||....+..+.+.+.|.++|..
T Consensus 290 ~l~~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 290 ELHRRAT----HFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHHCS----SEEEEEEETTCCSCHHHHCHHHHHHHHHHHTTC
T ss_pred HHHHhCC----CCeeEEEeCCCCCCcchhCHHHHHHHHHHHHhc
Confidence 5555443 356 99999999999888788888888777754
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=157.56 Aligned_cols=178 Identities=14% Similarity=0.169 Sum_probs=129.6
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|+||++||++++...|..+++.|...||.++.+|+|+++.+.. .....++.+.+++
T Consensus 29 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~-----------------------~~~~~~~~~~~~~ 85 (309)
T 3u1t_A 29 GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAK-----------------------PDIEYRLQDHVAY 85 (309)
T ss_dssp SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCCHHHHHHH
T ss_pred CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCC-----------------------CCcccCHHHHHHH
Confidence 57899999999999999999998777899999999998765421 1112345556667
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------hh-----------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------SL----------------- 175 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------~~----------------- 175 (251)
+.++++.+ +.++++|+|||+||.+++.+|.++|++++++|++++...... ..
T Consensus 86 ~~~~~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (309)
T 3u1t_A 86 MDGFIDAL-----GLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTADVG 160 (309)
T ss_dssp HHHHHHHH-----TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTTHH
T ss_pred HHHHHHHc-----CCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccchh
Confidence 77776642 346899999999999999999999999999999987544220 00
Q ss_pred ----------------------------hhhh----c----------------------------------ccCCCCCEE
Q 025550 176 ----------------------------IDQF----T----------------------------------SDAKKTPIL 189 (251)
Q Consensus 176 ----------------------------~~~~----~----------------------------------~~~~~~p~l 189 (251)
...+ . ..++++|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 240 (309)
T 3u1t_A 161 EKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIPKL 240 (309)
T ss_dssp HHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEE
T ss_pred hhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCCEE
Confidence 0000 0 012578999
Q ss_pred EEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH----HHHHHHHHHHhhcC
Q 025550 190 WSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE----LRNLESWIKTRMSC 248 (251)
Q Consensus 190 ~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~~ 248 (251)
+++|++|..++.+.++.+.+.+.. .+++.++++||....+. .+.+.+||++....
T Consensus 241 ~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~ 299 (309)
T 3u1t_A 241 LFHAEPGALAPKPVVDYLSENVPN----LEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPH 299 (309)
T ss_dssp EEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred EEecCCCCCCCHHHHHHHHhhCCC----CEEEEecCCcccchhhCHHHHHHHHHHHHHhcchh
Confidence 999999999998876666655533 47777799999876544 34466666666543
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=152.39 Aligned_cols=181 Identities=14% Similarity=0.179 Sum_probs=133.7
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+.....|.|||+||++++...|..+++.|.+. |.++.+|+|+++.+.. .....++.
T Consensus 15 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~-----------------------~~~~~~~~ 70 (267)
T 3fla_A 15 RAPDARARLVCLPHAGGSASFFFPLAKALAPA-VEVLAVQYPGRQDRRH-----------------------EPPVDSIG 70 (267)
T ss_dssp CCTTCSEEEEEECCTTCCGGGGHHHHHHHTTT-EEEEEECCTTSGGGTT-----------------------SCCCCSHH
T ss_pred CCCCCCceEEEeCCCCCCchhHHHHHHHhccC-cEEEEecCCCCCCCCC-----------------------CCCCcCHH
Confidence 34567799999999999999999999988754 9999999997754310 11223556
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCCCCcch-----------hhhh
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWVPFNAS-----------LIDQ 178 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~~~~~~-----------~~~~ 178 (251)
+.++++.++++. . +.++++|+|||+||.+++.++.++|+. +++++++++..+.... ....
T Consensus 71 ~~~~~~~~~l~~---~--~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (267)
T 3fla_A 71 GLTNRLLEVLRP---F--GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAE 145 (267)
T ss_dssp HHHHHHHHHTGG---G--TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHh---c--CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHH
Confidence 666677666662 2 457899999999999999999999986 8899988765432110 0000
Q ss_pred ----------------------------------h---cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEE
Q 025550 179 ----------------------------------F---TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 179 ----------------------------------~---~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (251)
+ .....++|+++++|++|..++.+.++.+.+.+.. +++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~ 222 (267)
T 3fla_A 146 LRKLGGSDAAMLADPELLAMVLPAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG---PADLR 222 (267)
T ss_dssp HHHTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS---CEEEE
T ss_pred HHHhcCcchhhccCHHHHHHHHHHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC---CceEE
Confidence 0 0024689999999999999998877776665533 57999
Q ss_pred EeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 222 AYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 222 ~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+++| ||....+..+.+.+.+.++|.
T Consensus 223 ~~~g-gH~~~~~~~~~~~~~i~~fl~ 247 (267)
T 3fla_A 223 VLPG-GHFFLVDQAAPMIATMTEKLA 247 (267)
T ss_dssp EESS-STTHHHHTHHHHHHHHHHHTC
T ss_pred EecC-CceeeccCHHHHHHHHHHHhc
Confidence 9998 999887777777777777665
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-21 Score=151.01 Aligned_cols=181 Identities=13% Similarity=0.125 Sum_probs=132.0
Q ss_pred CccEEEEEecCCCCCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..|.||++||++++...|.. +++.|.+.||.++.+|+||++.+.... ......++.+.+
T Consensus 22 ~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~--------------------~~~~~~~~~~~a 81 (298)
T 1q0r_A 22 ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRD--------------------FAAHPYGFGELA 81 (298)
T ss_dssp TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCC--------------------TTTSCCCHHHHH
T ss_pred CCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC--------------------CCcCCcCHHHHH
Confidence 34689999999999999987 558898889999999999886642100 001123455667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC-CC-------------------cc---
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV-PF-------------------NA--- 173 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~-~~-------------------~~--- 173 (251)
+++.++++. . +.+++.|+||||||.+++.+|.++|++++++|++++.. .. ..
T Consensus 82 ~dl~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (298)
T 1q0r_A 82 ADAVAVLDG---W--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGPQQ 156 (298)
T ss_dssp HHHHHHHHH---T--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCCCH
T ss_pred HHHHHHHHH---h--CCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccccccH
Confidence 777777773 3 34689999999999999999999999999999887533 10 00
Q ss_pred --------------h---------------------hh-------------h-----hh---------------c-ccCC
Q 025550 174 --------------S---------------------LI-------------D-----QF---------------T-SDAK 184 (251)
Q Consensus 174 --------------~---------------------~~-------------~-----~~---------------~-~~~~ 184 (251)
. .. . .. . ...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 236 (298)
T 1q0r_A 157 PFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELREV 236 (298)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGGGC
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccccccc
Confidence 0 00 0 00 0 1235
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++|+++++|++|.+++.+.++.+.+.+ ...++++++++||....+..+.+.+||.+...
T Consensus 237 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~gHe~p~~~~~~i~~fl~~~~~ 295 (298)
T 1q0r_A 237 TVPTLVIQAEHDPIAPAPHGKHLAGLI----PTARLAEIPGMGHALPSSVHGPLAEVILAHTR 295 (298)
T ss_dssp CSCEEEEEETTCSSSCTTHHHHHHHTS----TTEEEEEETTCCSSCCGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCccCCHHHHHHHHHhC----CCCEEEEcCCCCCCCcHHHHHHHHHHHHHHhh
Confidence 789999999999999988665544433 34689999999997777778889999988764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-22 Score=171.03 Aligned_cols=213 Identities=11% Similarity=0.069 Sum_probs=147.2
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC--chhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA--NEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
+.++..+..+++.+... ..+.+.|+||++||+++.... |......|.+ +||.++.+|+|+++.. +
T Consensus 444 ~~dg~~i~~~~~~p~~~---~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~---------g 511 (710)
T 2xdw_A 444 SKDGTKIPMFIVHKKGI---KLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEY---------G 511 (710)
T ss_dssp CTTSCEEEEEEEEETTC---CCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTT---------H
T ss_pred cCCCCEEEEEEEecCCC---CCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCC---------C
Confidence 34566666666654322 134578999999997765433 4444456666 8999999999976442 2
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
..|...... .... ...+++.+.++.+. +..++.++++|+|+|+||.++..++.++|+.++++|+.+|..
T Consensus 512 ~~~~~~~~~------~~~~----~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~ 581 (710)
T 2xdw_A 512 ETWHKGGIL------ANKQ----NCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVM 581 (710)
T ss_dssp HHHHHTTSG------GGTH----HHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCC
T ss_pred hHHHHhhhh------hcCC----chHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcc
Confidence 334321110 1111 22333333444333 333578899999999999999999999999999999999866
Q ss_pred CCcch--------hhh---------------hh----ccc-----CCCC-CEEEEccCCCCcccchhcccchHHHHhc--
Q 025550 170 PFNAS--------LID---------------QF----TSD-----AKKT-PILWSHGMADRTVLFEAGQAGPPFLEQA-- 214 (251)
Q Consensus 170 ~~~~~--------~~~---------------~~----~~~-----~~~~-p~l~~~g~~D~~~~~~~~~~~~~~l~~~-- 214 (251)
+.... +.. .. ... ..+. |+|+++|++|..+++..+.++++.|++.
T Consensus 582 d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~ 661 (710)
T 2xdw_A 582 DMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVG 661 (710)
T ss_dssp CTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTT
T ss_pred cHhhccccCCChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhc
Confidence 43211 000 00 012 3454 9999999999999999999999999987
Q ss_pred -----CCeeEEEEeCCCCCCCCH------HHHHHHHHHHHHhhcC
Q 025550 215 -----GISCEFKAYPGLGHSISN------EELRNLESWIKTRMSC 248 (251)
Q Consensus 215 -----~~~~~~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~ 248 (251)
+.++++++++++||.+.. +....+.+||.++|+.
T Consensus 662 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 706 (710)
T 2xdw_A 662 RSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNI 706 (710)
T ss_dssp TSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999998753 2357889999998864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-22 Score=152.76 Aligned_cols=178 Identities=15% Similarity=0.170 Sum_probs=131.4
Q ss_pred ccEEEEEecCC---CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|.|||+||++ ++...|..+++.|.+. |.++++|+||++.+... .....++.+.
T Consensus 36 ~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~ 92 (291)
T 2wue_A 36 DQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKR----------------------AEHGQFNRYA 92 (291)
T ss_dssp SSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTSTTSCCC----------------------SCCSSHHHHH
T ss_pred CCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCCCCCCCC----------------------CCCCcCHHHH
Confidence 36899999997 6666788888888755 99999999988664211 1112456667
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc--------c--------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN--------A-------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~--------~-------------- 173 (251)
++++.++++. .+ .+++.|+||||||.+++.+|.++|++++++|++++..... .
T Consensus 93 a~dl~~~l~~---l~--~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (291)
T 2wue_A 93 AMALKGLFDQ---LG--LGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTR 167 (291)
T ss_dssp HHHHHHHHHH---HT--CCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHH---hC--CCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCH
Confidence 7777777774 33 4689999999999999999999999999999998743210 0
Q ss_pred -------------------hh----hh----------------------h------hcccCCCCCEEEEccCCCCcccch
Q 025550 174 -------------------SL----ID----------------------Q------FTSDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 174 -------------------~~----~~----------------------~------~~~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
.. .. . -....+++|+++++|++|..++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~ 247 (291)
T 2wue_A 168 ENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNPLD 247 (291)
T ss_dssp HHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSCGG
T ss_pred HHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCCHH
Confidence 00 00 0 001136899999999999999988
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.++.+.+.+. ..++++++++||....+..+.+.+-+.++|..
T Consensus 248 ~~~~~~~~~p----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 248 GALVALKTIP----RAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGG 289 (291)
T ss_dssp GGHHHHHHST----TEEEEEESSCCSCHHHHTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCC----CCeEEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 7665554443 46899999999998877788888888887754
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=153.02 Aligned_cols=174 Identities=14% Similarity=0.134 Sum_probs=128.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.|++.||.++.+|+|+.. ...++...++
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------------------~~~~~~~~~~ 98 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNAG-----------------------------TGREMLACLD 98 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCCT-----------------------------TSHHHHHHHH
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCCc-----------------------------cHHHHHHHHH
Confidence 67999999999999999999999999899999999998420 1234444555
Q ss_pred HHHHHHHHH---HHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccC
Q 025550 118 NVHAMIDKE---VAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGM 194 (251)
Q Consensus 118 ~l~~~i~~~---~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~ 194 (251)
++.+..... ....++.++++++|||+||.+++.++ .++++++++.++++....... .......++|+++++|+
T Consensus 99 ~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~~~~--~~~~~~i~~P~lii~G~ 174 (258)
T 2fx5_A 99 YLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGLGHD--SASQRRQQGPMFLMSGG 174 (258)
T ss_dssp HHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSSTTCC--GGGGGCCSSCEEEEEET
T ss_pred HHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccccccc--hhhhccCCCCEEEEEcC
Confidence 555443200 01234667999999999999999887 456799999999876521111 11223478999999999
Q ss_pred CCCcccchh-cccchHHHHhcCCeeEEEEeCCCCCCCCH----HHHHHHHHHHHHhhc
Q 025550 195 ADRTVLFEA-GQAGPPFLEQAGISCEFKAYPGLGHSISN----EELRNLESWIKTRMS 247 (251)
Q Consensus 195 ~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~l~ 247 (251)
+|.+++.+. ++.+.+. .+.++++++++|++|.+.. +..+.+.+||.+++.
T Consensus 175 ~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 175 GDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQLM 229 (258)
T ss_dssp TCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHHH
T ss_pred CCcccCchhhHHHHHhc---cCCCeEEEEECCCCCccccchHHHHHHHHHHHHHHHhc
Confidence 999999875 5555544 3456899999999998764 446888999998875
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-21 Score=168.89 Aligned_cols=213 Identities=11% Similarity=0.093 Sum_probs=145.1
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC--CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP--ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
.++..+..+++.++.. +.+.+.|+||++||+.+... .|......|+++||.++.+|+++++.. +..
T Consensus 488 ~dG~~i~~~l~~p~~~---~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~---------G~~ 555 (751)
T 2xe4_A 488 PDQTKIPLSVVYHKDL---DMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSEL---------GRA 555 (751)
T ss_dssp TTCCEEEEEEEEETTS---CTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTT---------CTH
T ss_pred CCCcEEEEEEEcCCCC---CCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCc---------Ccc
Confidence 4555666665543221 23457899999999776543 466666778889999999999976432 234
Q ss_pred ccc-ccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 93 WFD-IHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 93 w~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
|.. .... ......+.+.++.+..+++ +..++.++++|+|+|+||.+++.++.++|+.++++|+.+|..+.
T Consensus 556 ~~~~~~~~------~~~~~~~~D~~~~~~~l~~---~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~ 626 (751)
T 2xe4_A 556 WYEIGAKY------LTKRNTFSDFIAAAEFLVN---AKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDV 626 (751)
T ss_dssp HHHTTSSG------GGTHHHHHHHHHHHHHHHH---TTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCH
T ss_pred hhhccccc------cccCccHHHHHHHHHHHHH---CCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchH
Confidence 433 1110 1112233333333333222 33468899999999999999999999999999999999986542
Q ss_pred cchh--------------------------hhhh----cccCCCCC-EEEEccCCCCcccchhcccchHHHHhcCC---e
Q 025550 172 NASL--------------------------IDQF----TSDAKKTP-ILWSHGMADRTVLFEAGQAGPPFLEQAGI---S 217 (251)
Q Consensus 172 ~~~~--------------------------~~~~----~~~~~~~p-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~---~ 217 (251)
.... .... .....+.| +|+++|++|..+++.++.++++.|++.+. .
T Consensus 627 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~ 706 (751)
T 2xe4_A 627 MTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNE 706 (751)
T ss_dssp HHHHTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCC
T ss_pred HhhhcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCce
Confidence 1110 0000 11235676 99999999999999999999999998843 4
Q ss_pred eEEEEeCCCCCCCCH------HHHHHHHHHHHHhhcC
Q 025550 218 CEFKAYPGLGHSISN------EELRNLESWIKTRMSC 248 (251)
Q Consensus 218 ~~~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~ 248 (251)
+.+++++++||.+.. +....+.+||.++|+.
T Consensus 707 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~ 743 (751)
T 2xe4_A 707 ILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKS 743 (751)
T ss_dssp EEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCC
Confidence 667777999998752 2245689999999864
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=177.74 Aligned_cols=207 Identities=14% Similarity=0.103 Sum_probs=138.7
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCch--hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 19 IFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PANE--PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
.+..++..|+.+ ...++.|+||++||++.+. ..|. .....+++.||.++.+|+|+++... ..|
T Consensus 479 ~l~~~~~~P~~~---~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g---------~~~ 546 (723)
T 1xfd_A 479 NLPMQILKPATF---TDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQG---------TKL 546 (723)
T ss_dssp EECCBEEBCSSC---CSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSH---------HHH
T ss_pred eEEEEEEeCCCC---CCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCcccc---------HHH
Confidence 555444443222 1346789999999988763 2333 3555777789999999999765421 111
Q ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccC
Q 025550 94 FDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGW 168 (251)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~ 168 (251)
..... .......+. ++.+.++.+. ...++.++++|+|||+||.+++.++.++ |+.++++++++|.
T Consensus 547 ~~~~~------~~~~~~~~~----d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~ 616 (723)
T 1xfd_A 547 LHEVR------RRLGLLEEK----DQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPI 616 (723)
T ss_dssp HHTTT------TCTTTHHHH----HHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCC
T ss_pred HHHHH------hccCcccHH----HHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCC
Confidence 00000 011112222 3333333332 3335678999999999999999999999 9999999999985
Q ss_pred CCCcch---hh--------------hh----hcccCCC-CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC
Q 025550 169 VPFNAS---LI--------------DQ----FTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL 226 (251)
Q Consensus 169 ~~~~~~---~~--------------~~----~~~~~~~-~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 226 (251)
...... +. .. ....+.+ +|+|+++|++|..++++.++.+++.+++.+.++++++++++
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 696 (723)
T 1xfd_A 617 TDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKANYSLQIYPDE 696 (723)
T ss_dssp CCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTCCCEEEEETTC
T ss_pred cchHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCCCeEEEEECCC
Confidence 532210 00 00 0112356 79999999999999999999999999999999999999999
Q ss_pred CCCCC-HH----HHHHHHHHHHHhhc
Q 025550 227 GHSIS-NE----ELRNLESWIKTRMS 247 (251)
Q Consensus 227 ~H~~~-~~----~~~~~~~~l~~~l~ 247 (251)
+|.+. .+ ..+.+.+||.++|+
T Consensus 697 ~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 697 SHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CcccccCcchHHHHHHHHHHHHHHhc
Confidence 99983 33 35667777776654
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=156.38 Aligned_cols=179 Identities=13% Similarity=0.033 Sum_probs=132.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.|.+.||.++++|+||++.+..+. .....++.+.+++
T Consensus 46 g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~---------------------~~~~~~~~~~a~d 104 (297)
T 2xt0_A 46 EHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT---------------------DDAVYTFGFHRRS 104 (297)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES---------------------CGGGCCHHHHHHH
T ss_pred CCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC---------------------CcccCCHHHHHHH
Confidence 4789999999999999999999998889999999999887642110 0012356666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------ 174 (251)
+.++++. .+ .+++.|+||||||.+++.+|.++|++++++|++++.......
T Consensus 105 l~~ll~~---l~--~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (297)
T 2xt0_A 105 LLAFLDA---LQ--LERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGKLM 179 (297)
T ss_dssp HHHHHHH---HT--CCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHHHH
T ss_pred HHHHHHH---hC--CCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhHHH
Confidence 7777774 33 468999999999999999999999999999998874310000
Q ss_pred ------h--------hh------------hh---------------------ccc-CCCCCEEEEccCCCCcccchhccc
Q 025550 175 ------L--------ID------------QF---------------------TSD-AKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 175 ------~--------~~------------~~---------------------~~~-~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
. .. .+ ... .+++|+++++|++|.+++ ..++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~~~ 258 (297)
T 2xt0_A 180 QRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEVMG 258 (297)
T ss_dssp HHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHHHH
T ss_pred hccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHHHH
Confidence 0 00 00 002 678999999999999988 66666
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.+... +...+.++++||.... ..+.+.+.|.++|.
T Consensus 259 ~~~~~p~~--~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 259 MLRQAIRG--CPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHSTT--CCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred HHHhCCCC--eeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 66666442 3444457899999887 87888888877774
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=163.74 Aligned_cols=180 Identities=12% Similarity=0.125 Sum_probs=133.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.|.+.||.++.+|+|+++.+.... .....+..+.++
T Consensus 257 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~ 315 (555)
T 3i28_A 257 SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP---------------------EIEEYCMEVLCK 315 (555)
T ss_dssp SSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCS---------------------CGGGGSHHHHHH
T ss_pred CCCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC---------------------CcccccHHHHHH
Confidence 45889999999999999999999999999999999999876532110 111234556667
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh---------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI--------------------- 176 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~--------------------- 176 (251)
++.++++.+ +.++++++|||+||.+++.++.++|+.+++++++++.........
T Consensus 316 d~~~~~~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (555)
T 3i28_A 316 EMVTFLDKL-----GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEP 390 (555)
T ss_dssp HHHHHHHHH-----TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHHST
T ss_pred HHHHHHHHc-----CCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhhCC
Confidence 777777643 346899999999999999999999999999999887432110000
Q ss_pred ------------h-------------------------------------------------------------------
Q 025550 177 ------------D------------------------------------------------------------------- 177 (251)
Q Consensus 177 ------------~------------------------------------------------------------------- 177 (251)
.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (555)
T 3i28_A 391 GVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNME 470 (555)
T ss_dssp THHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSCHH
T ss_pred CchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHhcc
Confidence 0
Q ss_pred -------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHH----HHHHHHHHHhh
Q 025550 178 -------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEEL----RNLESWIKTRM 246 (251)
Q Consensus 178 -------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~l 246 (251)
......+++|+++++|++|.+++.+.++.+.+.+. ..++++++++||....+.. +.+.+||.+..
T Consensus 471 ~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 546 (555)
T 3i28_A 471 RNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDA 546 (555)
T ss_dssp HHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHHHT
T ss_pred ccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeCCCCCCcchhCHHHHHHHHHHHHHhcc
Confidence 00002567999999999999999988877777664 3589999999998765543 45666666655
Q ss_pred c
Q 025550 247 S 247 (251)
Q Consensus 247 ~ 247 (251)
.
T Consensus 547 ~ 547 (555)
T 3i28_A 547 R 547 (555)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.5e-22 Score=143.51 Aligned_cols=164 Identities=15% Similarity=0.095 Sum_probs=117.2
Q ss_pred CccEEEEEecCCCCC-CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSG-PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
+.|.||++||++++. ..|......... ..+.+++|+.+ ..++.+.+
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~------------------------------~~~~~~~~ 62 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFP---HWQRIRQREWY------------------------------QADLDRWV 62 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCT---TSEECCCSCCS------------------------------SCCHHHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcC---CeEEEeccCCC------------------------------CcCHHHHH
Confidence 468899999999887 566665554333 34566766421 12344456
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCC
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMAD 196 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D 196 (251)
+++.++++ . .+ ++++++|||+||.+++.++.++|+++++++++++.......+.........++|+++++|++|
T Consensus 63 ~~~~~~~~---~--~~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~P~lii~g~~D 136 (191)
T 3bdv_A 63 LAIRRELS---V--CT-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEIDDRIQASPLSVPTLTFASHND 136 (191)
T ss_dssp HHHHHHHH---T--CS-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTCTTTSCSSCCSSCEEEEECSSB
T ss_pred HHHHHHHH---h--cC-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccCccccccccCCCCEEEEecCCC
Confidence 66666555 2 23 789999999999999999999999999999999977654333222233457899999999999
Q ss_pred CcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-------HHHHHHHHHHHHh
Q 025550 197 RTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-------EELRNLESWIKTR 245 (251)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~ 245 (251)
.+++.+.++.+.+.+ ..+++++++++|.... +..+.+.+|+.+.
T Consensus 137 ~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 137 PLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp TTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred CcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 999998877777766 3589999999998654 2245555555544
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=160.48 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=91.9
Q ss_pred eEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhh------hhcCCCcceEEEEccCCCCCCc
Q 025550 9 LFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKT------LFTSPEFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~ 82 (251)
...+...++..+..+.+.+.... .....+.|+||++||++++...|..+.. .|++.||.++.+|+|+++.+..
T Consensus 29 ~~~~~~~dG~~l~~~~~~~~~~~-~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~ 107 (377)
T 1k8q_A 29 EYEVVTEDGYILGIDRIPYGRKN-SENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARR 107 (377)
T ss_dssp EEEEECTTSEEEEEEEECSCSSC-CTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCE
T ss_pred EEEeEcCCCCEEEEEEecCCCCC-ccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCC
Confidence 34445556767666666432110 0011367899999999998888776555 8888899999999998866432
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH-HHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC---
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR-NVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR--- 157 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--- 157 (251)
......... .....++.+.++ ++.++++.+. +. +.++++++|||+||.+++.+|.++|+
T Consensus 108 ~~~~~~~~~--------------~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~ 171 (377)
T 1k8q_A 108 NLYYSPDSV--------------EFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAK 171 (377)
T ss_dssp ESSSCTTST--------------TTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHT
T ss_pred CCCCCCCcc--------------cccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhh
Confidence 110000000 000122333344 4444444332 22 34689999999999999999999998
Q ss_pred CcceEEEeccCC
Q 025550 158 KLGGGAIFSGWV 169 (251)
Q Consensus 158 ~~~~~i~~~~~~ 169 (251)
+++++|++++..
T Consensus 172 ~v~~lvl~~~~~ 183 (377)
T 1k8q_A 172 RIKTFYALAPVA 183 (377)
T ss_dssp TEEEEEEESCCS
T ss_pred hhhEEEEeCCch
Confidence 899999998853
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-23 Score=160.40 Aligned_cols=179 Identities=15% Similarity=0.113 Sum_probs=131.7
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.|++.||.++++|+||++.+..+. .....++...+++
T Consensus 47 g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~---------------------~~~~y~~~~~a~d 105 (310)
T 1b6g_A 47 EDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV---------------------DEEDYTFEFHRNF 105 (310)
T ss_dssp SCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES---------------------CGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC---------------------CcCCcCHHHHHHH
Confidence 4789999999999999999999998889999999999886642110 0012356666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC---CC----------c-c-----------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV---PF----------N-A----------- 173 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~---~~----------~-~----------- 173 (251)
+.++++. .+ .+++.|+||||||.+++.+|.++|++++++|++++.. +. . .
T Consensus 106 l~~ll~~---l~--~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (310)
T 1b6g_A 106 LLALIER---LD--LRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLV 180 (310)
T ss_dssp HHHHHHH---HT--CCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHHH
T ss_pred HHHHHHH---cC--CCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHHhc
Confidence 7777774 34 4589999999999999999999999999999988643 10 0 0
Q ss_pred ----------------hhh----hh----h--------------------------------ccc-CCCCCEEEEccCCC
Q 025550 174 ----------------SLI----DQ----F--------------------------------TSD-AKKTPILWSHGMAD 196 (251)
Q Consensus 174 ----------------~~~----~~----~--------------------------------~~~-~~~~p~l~~~g~~D 196 (251)
.+. .. + ... .+++|+++++|++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D 260 (310)
T 1b6g_A 181 TPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGMKD 260 (310)
T ss_dssp SCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETTC
T ss_pred cCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEeccCc
Confidence 000 00 0 002 67899999999999
Q ss_pred CcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 197 RTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..++ +.++.+.+.+... +...++++++||.... ..+.+.+.|.++|.
T Consensus 261 ~~~~-~~~~~~~~~ip~~--~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~ 307 (310)
T 1b6g_A 261 KLLG-PDVMYPMKALING--CPEPLEIADAGHFVQE-FGEQVAREALKHFA 307 (310)
T ss_dssp SSSS-HHHHHHHHHHSTT--CCCCEEETTCCSCGGG-GHHHHHHHHHHHHH
T ss_pred chhh-hHHHHHHHhcccc--cceeeecCCcccchhh-ChHHHHHHHHHHHh
Confidence 9998 7776666666442 3333334999999888 87777777777765
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-21 Score=152.02 Aligned_cols=178 Identities=17% Similarity=0.134 Sum_probs=122.0
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
+.||++||++++...|......|.. .+|.++.+|+||++.+..... ......+....+++
T Consensus 55 ~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~~-------------------~~~~~~~~~~~a~d 115 (330)
T 3nwo_A 55 LPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLPD-------------------APADFWTPQLFVDE 115 (330)
T ss_dssp CCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCTT-------------------SCGGGCCHHHHHHH
T ss_pred CcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCCC-------------------CccccccHHHHHHH
Confidence 3699999999998889887777765 699999999998866421000 01112345566777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------- 173 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------- 173 (251)
+.++++. .+ .+++.|+||||||.+++.+|.++|+++.+++++++......
T Consensus 116 l~~ll~~---lg--~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (330)
T 3nwo_A 116 FHAVCTA---LG--IERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAALDRHEA 190 (330)
T ss_dssp HHHHHHH---HT--CCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHH---cC--CCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 7777773 33 46899999999999999999999999999998876432100
Q ss_pred -----------------------------hhhhh-------------------------h-------cccCCCCCEEEEc
Q 025550 174 -----------------------------SLIDQ-------------------------F-------TSDAKKTPILWSH 192 (251)
Q Consensus 174 -----------------------------~~~~~-------------------------~-------~~~~~~~p~l~~~ 192 (251)
..... + ....+++|+++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~ 270 (330)
T 3nwo_A 191 AGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVLVIA 270 (330)
T ss_dssp HTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCSCEEEEE
T ss_pred ccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCCCeEEEe
Confidence 00000 0 0113589999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|++|.+++. .++. +.+.-...++++++++||....+..+.+.+-+.++|
T Consensus 271 G~~D~~~p~-~~~~----~~~~ip~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL 319 (330)
T 3nwo_A 271 GEHDEATPK-TWQP----FVDHIPDVRSHVFPGTSHCTHLEKPEEFRAVVAQFL 319 (330)
T ss_dssp ETTCSSCHH-HHHH----HHHHCSSEEEEEETTCCTTHHHHSHHHHHHHHHHHH
T ss_pred eCCCccChH-HHHH----HHHhCCCCcEEEeCCCCCchhhcCHHHHHHHHHHHH
Confidence 999998763 3333 333333579999999999988766555544444444
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-21 Score=150.38 Aligned_cols=176 Identities=14% Similarity=0.162 Sum_probs=125.3
Q ss_pred cEEEEEecCCCCCC---CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 40 NFILWLHGLGDSGP---ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 40 ~~vv~~HG~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
|.|||+||++.+.. .|..+.+.| +.+|.++++|+||++.+... .....++.+.+
T Consensus 26 ~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~----------------------~~~~~~~~~~a 82 (282)
T 1iup_A 26 QPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGFGFTDRP----------------------ENYNYSKDSWV 82 (282)
T ss_dssp SEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTSTTSCCC----------------------TTCCCCHHHHH
T ss_pred CeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCCCCCCCC----------------------CCCCCCHHHHH
Confidence 57999999887665 566677777 57899999999988654211 00123455667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc------------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN------------------------ 172 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~------------------------ 172 (251)
+++.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|++++.....
T Consensus 83 ~dl~~~l~---~l~--~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1iup_A 83 DHIIGIMD---ALE--IEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNLLD 157 (282)
T ss_dssp HHHHHHHH---HTT--CCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHHHHH
T ss_pred HHHHHHHH---HhC--CCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHHHHH
Confidence 77777777 333 4689999999999999999999999999999988643210
Q ss_pred ----------chhh-------------h---h------------h-----cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 173 ----------ASLI-------------D---Q------------F-----TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 173 ----------~~~~-------------~---~------------~-----~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
.... . . + ....+++|+++++|++|..++.+.++.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~ 237 (282)
T 1iup_A 158 IFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGE 237 (282)
T ss_dssp HHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred HhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHH
Confidence 0000 0 0 0 012468999999999999999887665555
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. ..++++++++||....+..+.+.+.+.++|.
T Consensus 238 ~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 271 (282)
T 1iup_A 238 LID----RAQLHVFGRCGHWTQIEQTDRFNRLVVEFFN 271 (282)
T ss_dssp HCT----TEEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred hCC----CCeEEEECCCCCCccccCHHHHHHHHHHHHh
Confidence 443 4689999999999876666555555555554
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=155.07 Aligned_cols=179 Identities=13% Similarity=0.115 Sum_probs=130.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++.+...|..+++.|.+.||.++++|+|+++.+... .....++.+.+++
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~----------------------~~~~~~~~~~a~d 60 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQ----------------------IEEIGSFDEYSEP 60 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCC----------------------GGGCCSHHHHTHH
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCC----------------------cccccCHHHHHHH
Confidence 367999999999998999999999888999999999988664210 0011345666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC-----cc---hh-------hh------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF-----NA---SL-------ID------ 177 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~-----~~---~~-------~~------ 177 (251)
+.++++ ..+ ..++++|+||||||.+++.+|.++|++++++|++++..+. .. .. ..
T Consensus 61 l~~~l~---~l~-~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (257)
T 3c6x_A 61 LLTFLE---ALP-PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTY 136 (257)
T ss_dssp HHHHHH---TSC-TTCCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEE
T ss_pred HHHHHH---hcc-ccCCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhc
Confidence 777776 222 2368999999999999999999999999999988764210 00 00 00
Q ss_pred -------------------hh----------------c-----------------ccCCCCCEEEEccCCCCcccchhcc
Q 025550 178 -------------------QF----------------T-----------------SDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 178 -------------------~~----------------~-----------------~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
.+ . ....++|+++++|++|..++.+.++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~ 216 (257)
T 3c6x_A 137 TKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQL 216 (257)
T ss_dssp EETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHH
T ss_pred cCCCCccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHH
Confidence 00 0 0002679999999999999988766
Q ss_pred cchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 206 AGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+. ..++++++++||....+..+.+.+.|.++++
T Consensus 217 ~~~~~~~----~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~~ 254 (257)
T 3c6x_A 217 WQIENYK----PDKVYKVEGGDHKLQLTKTKEIAEILQEVAD 254 (257)
T ss_dssp HHHHHSC----CSEEEECCSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHCC----CCeEEEeCCCCCCcccCCHHHHHHHHHHHHH
Confidence 5555543 3589999999999988777777776666654
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=153.63 Aligned_cols=199 Identities=18% Similarity=0.195 Sum_probs=133.5
Q ss_pred CCccEEEEEecCCCCCCCchh----hhhhhcCCCcceEEEEccCCCCCCccc------------CCCCcCCccccccCCC
Q 025550 37 MARNFILWLHGLGDSGPANEP----IKTLFTSPEFKLTKWSFPSAPNNPVTC------------NYGAVMPSWFDIHEIP 100 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~g~~~~~w~~~~~~~ 100 (251)
.+.|.||++||++++...|.. +++.|.+.|+.++.+|+|.....+... ..| ..+.|+....
T Consensus 3 ~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g-~~~~w~~~~~-- 79 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDAD-VNRAWFYHSE-- 79 (243)
T ss_dssp CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTT-CCEESSCCCS--
T ss_pred CcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCC-CCcccccCCC--
Confidence 356899999999999887763 666777679999999999432210000 011 1245654322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC------CCcceEEEeccCCCCcch
Q 025550 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP------RKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p------~~~~~~i~~~~~~~~~~~ 174 (251)
.....++.++++++.+.++. +.++++|+||||||.+++.++.+++ ..+++++.++++......
T Consensus 80 -----~~~~~d~~~~~~~l~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 148 (243)
T 1ycd_A 80 -----ISHELDISEGLKSVVDHIKA------NGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD 148 (243)
T ss_dssp -----SGGGCCCHHHHHHHHHHHHH------HCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC
T ss_pred -----CcchhhHHHHHHHHHHHHHh------cCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc
Confidence 11345666677777766552 2357999999999999999998753 257788888887543211
Q ss_pred ------------hhhhh-cccCCCCCEEEEccCCCCcccchhcccchHHHHhcC---CeeEEEEeCCCCCCCC--HHHHH
Q 025550 175 ------------LIDQF-TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG---ISCEFKAYPGLGHSIS--NEELR 236 (251)
Q Consensus 175 ------------~~~~~-~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~---~~~~~~~~~g~~H~~~--~~~~~ 236 (251)
+...+ .....++|+++++|++|.+++.+.++.+.+.+...+ .......++++||.+. .+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~~~gH~~~~~~~~~~ 228 (243)
T 1ycd_A 149 PEHPGELRITEKFRDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPGGHMVPNKKDIIR 228 (243)
T ss_dssp TTSTTCEEECGGGTTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEESSSSSCCCCHHHHH
T ss_pred cccccccccchhHHHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEecCCCCcCCchHHHHH
Confidence 11111 123478999999999999999999988998887641 1123344556799875 34678
Q ss_pred HHHHHHHHhhcCC
Q 025550 237 NLESWIKTRMSCS 249 (251)
Q Consensus 237 ~~~~~l~~~l~~~ 249 (251)
.+.+||.+.++.+
T Consensus 229 ~i~~fl~~~~~~~ 241 (243)
T 1ycd_A 229 PIVEQITSSLQEA 241 (243)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHhhhhc
Confidence 8999999988643
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=156.74 Aligned_cols=183 Identities=13% Similarity=0.075 Sum_probs=127.2
Q ss_pred CCCccEEEEEecCCCCCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..+.|+||++||++++...|.. +++.+++.||.++.+|+|+++.+... .........
T Consensus 93 ~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~----------------------~~~~~~~~~ 150 (367)
T 2hdw_A 93 GDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQ----------------------PRNVASPDI 150 (367)
T ss_dssp SSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCS----------------------SSSCCCHHH
T ss_pred CCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCc----------------------Cccccchhh
Confidence 4567999999999998888875 78889889999999999987653210 001111233
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC----------------------
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF---------------------- 171 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~---------------------- 171 (251)
.++++.+.++.+. +..++.++++++|||+||.+++.++..+| .++++++++++...
T Consensus 151 ~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (367)
T 2hdw_A 151 NTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRTRTLEQ 229 (367)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHHHHHHH
Confidence 3444444444443 33456789999999999999999999998 59999999864210
Q ss_pred --------------------c---c---hh----h--------------------------------hhhcccCCC-CCE
Q 025550 172 --------------------N---A---SL----I--------------------------------DQFTSDAKK-TPI 188 (251)
Q Consensus 172 --------------------~---~---~~----~--------------------------------~~~~~~~~~-~p~ 188 (251)
. . .. . ......+.+ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Pv 309 (367)
T 2hdw_A 230 LGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISPRPI 309 (367)
T ss_dssp HHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGGTTSCE
T ss_pred HHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhhcCCce
Confidence 0 0 00 0 000112356 999
Q ss_pred EEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH-----HHHHHHHHHHHhh
Q 025550 189 LWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE-----ELRNLESWIKTRM 246 (251)
Q Consensus 189 l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~~~l 246 (251)
++++|++|. +.+.++.+++. .+.++++++++|++|....+ ..+.+.+||.++|
T Consensus 310 Lii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 310 LLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp EEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred EEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 999999998 55655444443 56789999999999985321 3688999998765
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-21 Score=148.97 Aligned_cols=178 Identities=17% Similarity=0.183 Sum_probs=119.0
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.||++||+.++...|......+.+.||.++.+|+||++.+... .....++.+.+++
T Consensus 28 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~~~d 85 (293)
T 1mtz_A 28 KAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEP----------------------DQSKFTIDYGVEE 85 (293)
T ss_dssp SEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCC----------------------CGGGCSHHHHHHH
T ss_pred CCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCC----------------------CCCcccHHHHHHH
Confidence 378999999766655554444445678999999999988664211 0011344555666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------- 173 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------- 173 (251)
+.++++.+. ++ ++++|+||||||.+++.+|.++|++++++|++++......
T Consensus 86 l~~~~~~l~--~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (293)
T 1mtz_A 86 AEALRSKLF--GN--EKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKKYGS 161 (293)
T ss_dssp HHHHHHHHH--TT--CCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhc--CC--CcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHHhhc
Confidence 666666321 33 5899999999999999999999999999999887543100
Q ss_pred -----------------------------hhhhh---------h----------------------cccCCCCCEEEEcc
Q 025550 174 -----------------------------SLIDQ---------F----------------------TSDAKKTPILWSHG 193 (251)
Q Consensus 174 -----------------------------~~~~~---------~----------------------~~~~~~~p~l~~~g 193 (251)
..... + ...++++|+++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 241 (293)
T 1mtz_A 162 SGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLITVG 241 (293)
T ss_dssp HTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEEEEE
T ss_pred cCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEEEee
Confidence 00000 0 00125799999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++| .+++..++.+.+.+. ..++++++++||....+..+.+.+-+.++|.
T Consensus 242 ~~D-~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 290 (293)
T 1mtz_A 242 EYD-EVTPNVARVIHEKIA----GSELHVFRDCSHLTMWEDREGYNKLLSDFIL 290 (293)
T ss_dssp TTC-SSCHHHHHHHHHHST----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHhCC----CceEEEeCCCCCCccccCHHHHHHHHHHHHH
Confidence 999 566665555544442 4689999999999876665555555555443
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=154.65 Aligned_cols=178 Identities=18% Similarity=0.196 Sum_probs=122.5
Q ss_pred CCccEEEEEecCCC---CCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGD---SGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+||++||++. +...|..++..+. +.|+.++.+|+|+.+... ....+
T Consensus 94 ~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~--------------------------~~~~~ 147 (326)
T 3d7r_A 94 QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH--------------------------IDDTF 147 (326)
T ss_dssp CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC--------------------------HHHHH
T ss_pred CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC--------------------------chHHH
Confidence 45689999999763 4445666666665 459999999999754311 11222
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC----cceEEEeccCCCCcchh---h-h-------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK----LGGGAIFSGWVPFNASL---I-D------- 177 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~----~~~~i~~~~~~~~~~~~---~-~------- 177 (251)
.+..+.+..+++ + ++.++++|+|||+||.+++.++.++|+. ++++++++|+....... . .
T Consensus 148 ~d~~~~~~~l~~---~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~ 222 (326)
T 3d7r_A 148 QAIQRVYDQLVS---E--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISDALIEQDAV 222 (326)
T ss_dssp HHHHHHHHHHHH---H--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCHHHHHHCSS
T ss_pred HHHHHHHHHHHh---c--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHhhhcccCcc
Confidence 222333333332 2 4678999999999999999999988766 99999999976532110 0 0
Q ss_pred -----------h-----------h----cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 178 -----------Q-----------F----TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 178 -----------~-----------~----~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
. . ......+|+++++|++|.. ...+..+.+.+++.+.++++++++|++|.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~--~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 300 (326)
T 3d7r_A 223 LSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMT--HPDMKLFEQMMLQHHQYIEFYDYPKMVHDFP 300 (326)
T ss_dssp CCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTT--HHHHHHHHHHHHHTTCCEEEEEETTCCTTGG
T ss_pred cCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccc--hHHHHHHHHHHHHCCCcEEEEEeCCCccccc
Confidence 0 0 0011235999999999974 3456678899999999999999999999876
Q ss_pred H---HH----HHHHHHHHHHhhc
Q 025550 232 N---EE----LRNLESWIKTRMS 247 (251)
Q Consensus 232 ~---~~----~~~~~~~l~~~l~ 247 (251)
. +. .+.+.+||.+.+.
T Consensus 301 ~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 301 IYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp GSSSHHHHHHHHHHHHHHTSCCC
T ss_pred ccCCHHHHHHHHHHHHHHHHHhh
Confidence 5 43 4566677766654
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-22 Score=153.33 Aligned_cols=179 Identities=11% Similarity=0.152 Sum_probs=126.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.|.+ +|.++.+|+||++.+.... + ......++.+.+++
T Consensus 20 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--------~-----------~~~~~~~~~~~a~d 79 (271)
T 1wom_A 20 KASIMFAPGFGCDQSVWNAVAPAFEE-DHRVILFDYVGSGHSDLRA--------Y-----------DLNRYQTLDGYAQD 79 (271)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTT-TSEEEECCCSCCSSSCCTT--------C-----------CTTGGGSHHHHHHH
T ss_pred CCcEEEEcCCCCchhhHHHHHHHHHh-cCeEEEECCCCCCCCCCCc--------c-----------cccccccHHHHHHH
Confidence 47899999999999999999998875 7999999999886542110 0 00112345666777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc-----------c----h---------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-----------A----S--------- 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-----------~----~--------- 174 (251)
+.++++. . +.++++|+||||||.+++.+|.++|++++++|++++..... . .
T Consensus 80 l~~~l~~---l--~~~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T 1wom_A 80 VLDVCEA---L--DLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNY 154 (271)
T ss_dssp HHHHHHH---T--TCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCH
T ss_pred HHHHHHH---c--CCCCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhH
Confidence 7777763 3 34689999999999999999999999999999987632100 0 0
Q ss_pred -------------------hhhhh--------------------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 175 -------------------LIDQF--------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 175 -------------------~~~~~--------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
....+ ....+++|+++++|++|..++.+.++.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~ 234 (271)
T 1wom_A 155 IGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQ 234 (271)
T ss_dssp HHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHH
Confidence 00000 002478999999999999999876555544
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
.+. ..++++++++||....+..+.+.+.+.+++
T Consensus 235 ~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 267 (271)
T 1wom_A 235 HLP----YSSLKQMEARGHCPHMSHPDETIQLIGDYL 267 (271)
T ss_dssp HSS----SEEEEEEEEESSCHHHHCHHHHHHHHHHHH
T ss_pred HCC----CCEEEEeCCCCcCccccCHHHHHHHHHHHH
Confidence 432 468999999999987665555554444444
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=156.19 Aligned_cols=174 Identities=17% Similarity=0.175 Sum_probs=125.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|.|||+||++++...|..+++.|.+ .|.++++|+||++.+.. +....++.+.++++
T Consensus 30 ~pvvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~-----------------------~~~~~~~~~~a~dl 85 (316)
T 3afi_E 30 PVVLFLHGNPTSSHIWRNILPLVSP-VAHCIAPDLIGFGQSGK-----------------------PDIAYRFFDHVRYL 85 (316)
T ss_dssp CEEEEECCTTCCGGGGTTTHHHHTT-TSEEEEECCTTSTTSCC-----------------------CSSCCCHHHHHHHH
T ss_pred CeEEEECCCCCchHHHHHHHHHHhh-CCEEEEECCCCCCCCCC-----------------------CCCCCCHHHHHHHH
Confidence 5899999999999999999998875 59999999998866421 11123456667777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC------c-----------c---------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF------N-----------A--------- 173 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~------~-----------~--------- 173 (251)
.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|++++..+. . .
T Consensus 86 ~~ll~---~l~--~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
T 3afi_E 86 DAFIE---QRG--VTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVFRKF 160 (316)
T ss_dssp HHHHH---HTT--CCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHH---HcC--CCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHHHHh
Confidence 77777 334 468999999999999999999999999999998752210 0 0
Q ss_pred ---h-----------hh----h-------------hh-----------------cc---------------------cCC
Q 025550 174 ---S-----------LI----D-------------QF-----------------TS---------------------DAK 184 (251)
Q Consensus 174 ---~-----------~~----~-------------~~-----------------~~---------------------~~~ 184 (251)
. +. . .+ .. .++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 240 (316)
T 3afi_E 161 RTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAALAAS 240 (316)
T ss_dssp TSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHHHC
T ss_pred cCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhhhcc
Confidence 0 00 0 00 00 025
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++|+++++|++|..++.+.++.+.+.+ ...++++++++||....+..+.+.+.|.++|
T Consensus 241 ~~P~Lvi~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl 298 (316)
T 3afi_E 241 SYPKLLFTGEPGALVSPEFAERFAASL----TRCALIRLGAGLHYLQEDHADAIGRSVAGWI 298 (316)
T ss_dssp CSCEEEEEEEECSSSCHHHHHHHHHHS----SSEEEEEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCCCCccCHHHHHHHHHhC----CCCeEEEcCCCCCCchhhCHHHHHHHHHHHH
Confidence 799999999999999987655554444 3468999999999988776555554444444
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=148.89 Aligned_cols=160 Identities=11% Similarity=0.131 Sum_probs=109.1
Q ss_pred ccEEEEEecCCCCCCCchh--hhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 39 RNFILWLHGLGDSGPANEP--IKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~--~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.|+|||+||++++...+.. +.+++.+. ++.++.+|+|+++ .+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g----------------------------------~~ 47 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYP----------------------------------AE 47 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSH----------------------------------HH
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCH----------------------------------HH
Confidence 3899999999988776643 55666554 4777877776432 12
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh-------------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL------------------- 175 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~------------------- 175 (251)
+.+.+...+.. . +.++++|+|+||||.+|+.+|.++|.....++...+........
T Consensus 48 ~~~~l~~~~~~---~--~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (202)
T 4fle_A 48 AAEMLESIVMD---K--AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLESRH 122 (202)
T ss_dssp HHHHHHHHHHH---H--TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECHHH
T ss_pred HHHHHHHHHHh---c--CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhccccccccccchHHH
Confidence 34455554442 2 45799999999999999999999998766655443311100000
Q ss_pred -----hhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 176 -----IDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 176 -----~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
.......+.++|+++++|++|.+||++.++++++ ++++++++|++|.+. .+..+.|.+||+-
T Consensus 123 ~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~~~~~~~~I~~FL~~ 191 (202)
T 4fle_A 123 IYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVGFDHYFSPIVTFLGL 191 (202)
T ss_dssp HHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTTGGGGHHHHHHHHTC
T ss_pred HHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCCHHHHHHHHHHHHhh
Confidence 0001123478999999999999999988765543 358899999999875 3457888888863
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=152.46 Aligned_cols=196 Identities=11% Similarity=0.089 Sum_probs=134.8
Q ss_pred CCccEEEEEecC--CCCCCCchhh---hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGL--GDSGPANEPI---KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~--~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
++.|+||++||. +++...|... .+.+.+.++.++.+|..+. .|+..........+......
T Consensus 32 ~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~--------------~~~~~~~~~~~~~g~~~~~~ 97 (304)
T 1sfr_A 32 ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQS--------------SFYSDWYQPACGKAGCQTYK 97 (304)
T ss_dssp TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTT--------------CTTCBCSSCEEETTEEECCB
T ss_pred CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCC--------------ccccccCCcccccccccccc
Confidence 568999999999 5566667653 3567778888887776421 11110000000000000112
Q ss_pred HHHH-HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------------
Q 025550 112 LLKA-VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------------- 177 (251)
Q Consensus 112 ~~~~-~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------------- 177 (251)
..+. .+++...+++ +.+++.++++|+|+||||.+++.++.++|+.++++++++|..........
T Consensus 98 ~~~~~~~~l~~~i~~--~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
T 1sfr_A 98 WETFLTSELPGWLQA--NRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGY 175 (304)
T ss_dssp HHHHHHTHHHHHHHH--HHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHH--HCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchhhhhhHhhhhcccc
Confidence 2222 3556665653 34667779999999999999999999999999999999997754321000
Q ss_pred ------------hh-------cccC---CCCCEEEEccCCCC--------------cccchhcccchHHHHhcC-CeeEE
Q 025550 178 ------------QF-------TSDA---KKTPILWSHGMADR--------------TVLFEAGQAGPPFLEQAG-ISCEF 220 (251)
Q Consensus 178 ------------~~-------~~~~---~~~p~l~~~g~~D~--------------~~~~~~~~~~~~~l~~~~-~~~~~ 220 (251)
.+ ...+ .+.|+++.+|+.|. .++.+.++++.+.|++.| +++++
T Consensus 176 ~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G~~~v~~ 255 (304)
T 1sfr_A 176 KASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVF 255 (304)
T ss_dssp CHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred chHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 00 0001 25899999999998 567888899999999999 99999
Q ss_pred EEeCCCCCCCC--HHHHHHHHHHHHHhhcC
Q 025550 221 KAYPGLGHSIS--NEELRNLESWIKTRMSC 248 (251)
Q Consensus 221 ~~~~g~~H~~~--~~~~~~~~~~l~~~l~~ 248 (251)
+++++++|.+. .+.+.++..||.+.|..
T Consensus 256 ~~~~~g~H~~~~w~~~l~~~l~~l~~~l~~ 285 (304)
T 1sfr_A 256 DFPDSGTHSWEYWGAQLNAMKPDLQRALGA 285 (304)
T ss_dssp ECCSCCCSSHHHHHHHHHHTHHHHHHHHTC
T ss_pred EecCCCccCHHHHHHHHHHHHHHHHHhcCC
Confidence 99976799864 67788999999999874
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-22 Score=153.09 Aligned_cols=176 Identities=17% Similarity=0.203 Sum_probs=127.5
Q ss_pred ccEEEEEecCC---CCCCCchhhh-hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 39 RNFILWLHGLG---DSGPANEPIK-TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 39 ~~~vv~~HG~~---~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.|.|||+||++ ++...|..++ +.|.+. |.++.+|+||++.+... .....++.+
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~ 89 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGFNKSDAV----------------------VMDEQRGLV 89 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTSTTSCCC----------------------CCSSCHHHH
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCCCCCCCC----------------------CCcCcCHHH
Confidence 36899999997 6666788888 888755 99999999988654211 111345666
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc------c---------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN------A--------------- 173 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~------~--------------- 173 (251)
.++++.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|++++..... .
T Consensus 90 ~a~dl~~~l~---~l~--~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2puj_A 90 NARAVKGLMD---ALD--IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPS 164 (286)
T ss_dssp HHHHHHHHHH---HTT--CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHH---HhC--CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCc
Confidence 7777777777 333 4689999999999999999999999999999988743210 0
Q ss_pred --------------------hhh-hhh-----------------------------cccCCCCCEEEEccCCCCcccchh
Q 025550 174 --------------------SLI-DQF-----------------------------TSDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 174 --------------------~~~-~~~-----------------------------~~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
... ... ...++++|+++++|++|.+++.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~ 244 (286)
T 2puj_A 165 YETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDH 244 (286)
T ss_dssp HHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHH
T ss_pred HHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHH
Confidence 000 000 002368999999999999999887
Q ss_pred cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 204 GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++.+.+.+. ..++++++++||....+..+.+.+-+.++|
T Consensus 245 ~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 283 (286)
T 2puj_A 245 GLKLLWNID----DARLHVFSKCGAWAQWEHADEFNRLVIDFL 283 (286)
T ss_dssp HHHHHHHSS----SEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHCC----CCeEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 665555443 468999999999987776666666555555
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=148.36 Aligned_cols=171 Identities=15% Similarity=0.130 Sum_probs=123.3
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
.|||+||++++...|..+++.|. .+|.++.+|+||++.+... ...++.+.++.+.
T Consensus 15 ~vvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~------------------------~~~~~~~~~~~l~ 69 (258)
T 1m33_A 15 HLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGF------------------------GALSLADMAEAVL 69 (258)
T ss_dssp EEEEECCTTCCGGGGGGTHHHHH-TTSEEEEECCTTSTTCCSC------------------------CCCCHHHHHHHHH
T ss_pred eEEEECCCCCChHHHHHHHHHhh-cCcEEEEeeCCCCCCCCCC------------------------CCcCHHHHHHHHH
Confidence 89999999999999999999886 5899999999988654211 0112233233322
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------------hh------------
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA-------------SL------------ 175 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~-------------~~------------ 175 (251)
+ .++ +++.|+||||||.+++.+|.++|++++++|++++...... .+
T Consensus 70 ---~-----~l~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (258)
T 1m33_A 70 ---Q-----QAP-DKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTV 140 (258)
T ss_dssp ---T-----TSC-SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHH
T ss_pred ---H-----HhC-CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHH
Confidence 1 234 7899999999999999999999999999999875321100 00
Q ss_pred ---h--------------hh---------------h--------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 176 ---I--------------DQ---------------F--------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 176 ---~--------------~~---------------~--------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
. .. + ...+.++|+++++|++|..++.+.++.+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 220 (258)
T 1m33_A 141 ERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDK 220 (258)
T ss_dssp HHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTT
T ss_pred HHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHH
Confidence 0 00 0 002368999999999999999887766665
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
.+. ..++++++++||....+..+.+.+.|.+++...
T Consensus 221 ~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 256 (258)
T 1m33_A 221 LWP----HSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (258)
T ss_dssp TCT----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred hCc----cceEEEeCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 543 358899999999988777777777777777644
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=156.02 Aligned_cols=179 Identities=13% Similarity=0.011 Sum_probs=128.0
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
....+.||++||++++...|..+++.|.+. ||.++.+|+|+++.+. .....++.
T Consensus 33 ~~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~------------------------~~~~~~~~ 88 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESL------------------------RPLWEQVQ 88 (302)
T ss_dssp --CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGG------------------------SCHHHHHH
T ss_pred cCCCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccch------------------------hhHHHHHH
Confidence 345688999999999999999999999887 8999999999764321 01123444
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEeccCCCCcchh-----------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSGWVPFNASL----------------- 175 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~~~~~~~~~----------------- 175 (251)
+.++.+..+++ .. .++++++||||||.+++.++.++|+ +++++|++++........
T Consensus 89 ~~~~~l~~~~~---~~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (302)
T 1pja_A 89 GFREAVVPIMA---KA---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLY 162 (302)
T ss_dssp HHHHHHHHHHH---HC---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHH
T ss_pred HHHHHHHHHhh---cC---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHh
Confidence 44555555444 22 4689999999999999999999998 799999988743211100
Q ss_pred --------------------h--hh----------h--------------cccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 176 --------------------I--DQ----------F--------------TSDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 176 --------------------~--~~----------~--------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
. .. + ...+.+ |+++++|++|.+++++.++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~ 241 (302)
T 1pja_A 163 RICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGF 241 (302)
T ss_dssp HHHTSTTGGGSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCE
T ss_pred hccchHHHHHhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhh
Confidence 0 00 0 001245 99999999999999887776643
Q ss_pred HH------------------------HhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 210 FL------------------------EQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 210 ~l------------------------~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
.. ... .+.++++++|+||....+..+.+.+.+.++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 242 YDANETVLEMEEQLVYLRDSFGLKTLLAR-GAIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp ECTTCCEECGGGSHHHHTTTTSHHHHHHT-TCEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred cCCcccccchhhhhhhhhhhhchhhHhhc-CCeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 22 121 2389999999999988777778877777765
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-22 Score=151.85 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=125.9
Q ss_pred CccEEEEEecCC---CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 38 ARNFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 38 ~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..|+|||+||++ ++...|..+++.|.+. |.++.+|+||++.+... .....++.+
T Consensus 28 g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~ 84 (285)
T 1c4x_A 28 QSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFGQSEYP----------------------ETYPGHIMS 84 (285)
T ss_dssp TSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTSTTSCCC----------------------SSCCSSHHH
T ss_pred CCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCCCCCCC----------------------CCcccchhh
Confidence 346699999987 5566777788888754 99999999988654211 000123444
Q ss_pred H----HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-----------------
Q 025550 115 A----VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA----------------- 173 (251)
Q Consensus 115 ~----~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~----------------- 173 (251)
. ++++.++++. .+ .++++|+||||||.+++.+|.++|+++++++++++......
T Consensus 85 ~~~~~~~dl~~~l~~---l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (285)
T 1c4x_A 85 WVGMRVEQILGLMNH---FG--IEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPR 159 (285)
T ss_dssp HHHHHHHHHHHHHHH---HT--CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCC
T ss_pred hhhhHHHHHHHHHHH---hC--CCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhcccc
Confidence 4 6666666663 33 46899999999999999999999999999999886432100
Q ss_pred ----------------------hhh-----------------hhh---------------cccCCCCCEEEEccCCCCcc
Q 025550 174 ----------------------SLI-----------------DQF---------------TSDAKKTPILWSHGMADRTV 199 (251)
Q Consensus 174 ----------------------~~~-----------------~~~---------------~~~~~~~p~l~~~g~~D~~~ 199 (251)
... ..+ ....+++|+++++|++|.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 239 (285)
T 1c4x_A 160 LTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIV 239 (285)
T ss_dssp HHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred HHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCeee
Confidence 000 000 00236899999999999999
Q ss_pred cchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 200 LFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.++.+.+.+. ..++++++++||....+..+.+.+.+.++|.
T Consensus 240 p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 283 (285)
T 1c4x_A 240 PLDTSLYLTKHLK----HAELVVLDRCGHWAQLERWDAMGPMLMEHFR 283 (285)
T ss_dssp CTHHHHHHHHHCS----SEEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCC----CceEEEeCCCCcchhhcCHHHHHHHHHHHHh
Confidence 9887665555442 4689999999999887776666666666654
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=161.31 Aligned_cols=201 Identities=14% Similarity=0.082 Sum_probs=136.8
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC-chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA-NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
.+..++..+..|+..+. .+.+.|+||++||++++... +..++..+.+.||.++.+|+|+++.+....
T Consensus 172 ~i~~~g~~l~~~~~~P~------~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~------ 239 (415)
T 3mve_A 172 EIPFEKGKITAHLHLTN------TDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYP------ 239 (415)
T ss_dssp EEECSSSEEEEEEEESC------SSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSC------
T ss_pred EEEECCEEEEEEEEecC------CCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC------
Confidence 34446667776665421 24568999999999988554 444677888899999999999876532100
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
...+... ....+.+.+.. ...++.++++|+|||+||.+++.++..+|++++++|++++...
T Consensus 240 --------------~~~~~~~---~~~~v~~~l~~--~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~ 300 (415)
T 3mve_A 240 --------------LTEDYSR---LHQAVLNELFS--IPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIH 300 (415)
T ss_dssp --------------CCSCTTH---HHHHHHHHGGG--CTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCS
T ss_pred --------------CCCCHHH---HHHHHHHHHHh--CcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccc
Confidence 0111122 22333333331 2235678999999999999999999999999999999998643
Q ss_pred Ccch-----------------------------h---hhhhc--------ccCCCCCEEEEccCCCCcccchhcccchHH
Q 025550 171 FNAS-----------------------------L---IDQFT--------SDAKKTPILWSHGMADRTVLFEAGQAGPPF 210 (251)
Q Consensus 171 ~~~~-----------------------------~---~~~~~--------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~ 210 (251)
.... + ...+. ....++|+++++|++|.+++.+.++.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~- 379 (415)
T 3mve_A 301 DIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF- 379 (415)
T ss_dssp HHHHCHHHHTTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH-
T ss_pred cccccHHHHHHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH-
Confidence 1100 0 00000 12567999999999999999887654443
Q ss_pred HHhcCCeeEEEEeCC-CCCCCCHHHHHHHHHHHHHhhc
Q 025550 211 LEQAGISCEFKAYPG-LGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 211 l~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+++++++ ..|....+..+.+.+||.++|+
T Consensus 380 ---~~~~~~l~~i~g~~~h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 ---FSTYGKAKKISSKTITQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp ---TBTTCEEEEECCCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---hCCCceEEEecCCCcccchHHHHHHHHHHHHHHhc
Confidence 556789999998 3444445567889999999885
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-21 Score=146.25 Aligned_cols=180 Identities=13% Similarity=0.062 Sum_probs=126.5
Q ss_pred CccEEEEEecCCCCCCC-chh-----hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 38 ARNFILWLHGLGDSGPA-NEP-----IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..|+||++||++++... |.. +++.|++ +|.++.+|+|+++.+...... .....+
T Consensus 34 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~~~~~-------------------~~~~~~ 93 (286)
T 2qmq_A 34 KRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAPVFPL-------------------GYQYPS 93 (286)
T ss_dssp TCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCCCCCT-------------------TCCCCC
T ss_pred CCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCCCCCC-------------------CCCccC
Confidence 56899999999988764 554 6677765 699999999987543110000 001125
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-----------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS----------------- 174 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~----------------- 174 (251)
+.+.++++.++++.+ +.++++|+|||+||.+++.+|.++|++++++|++++.......
T Consensus 94 ~~~~~~~l~~~l~~l-----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (286)
T 2qmq_A 94 LDQLADMIPCILQYL-----NFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPD 168 (286)
T ss_dssp HHHHHHTHHHHHHHH-----TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHHHHh-----CCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccccchH
Confidence 566677777777642 3458999999999999999999999999999999884421100
Q ss_pred -----------------hhhh--------------------------h-----cccCCCCCEEEEccCCCCcccchhccc
Q 025550 175 -----------------LIDQ--------------------------F-----TSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 175 -----------------~~~~--------------------------~-----~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
.... . ....+++|+++++|++|..++ .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~---- 243 (286)
T 2qmq_A 169 MILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A---- 243 (286)
T ss_dssp HHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H----
T ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H----
Confidence 0000 0 002468999999999999887 2
Q ss_pred chHHHHhcCC-eeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 207 GPPFLEQAGI-SCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 207 ~~~~l~~~~~-~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..+.+++... ..++++++++||....+..+.+.+.+.++|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 VVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HHHHHHHSCGGGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 2455555544 5899999999999887777777777777764
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-21 Score=146.99 Aligned_cols=172 Identities=16% Similarity=0.249 Sum_probs=120.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++...|..+++.|.+ +|.++.+|+||++.+.... .....++.+.+++
T Consensus 29 ~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~---------------------~~~~~~~~~~a~d 86 (285)
T 3bwx_A 29 RPPVLCLPGLTRNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAK---------------------DPMTYQPMQYLQD 86 (285)
T ss_dssp SCCEEEECCTTCCGGGGHHHHHHHBB-TBCEEEECCTTBTTSCCCS---------------------SGGGCSHHHHHHH
T ss_pred CCcEEEECCCCcchhhHHHHHHHhhc-CCEEEeecCCCCCCCCCCC---------------------CccccCHHHHHHH
Confidence 57899999999999999999999986 9999999999876542100 0112345556677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc--------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-------------------------- 172 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-------------------------- 172 (251)
+.++++. .+ .+++.|+||||||.+++.+|.++|++++++|+++......
T Consensus 87 l~~~l~~---l~--~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (285)
T 3bwx_A 87 LEALLAQ---EG--IERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARA 161 (285)
T ss_dssp HHHHHHH---HT--CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHHHH
T ss_pred HHHHHHh---cC--CCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHHHH
Confidence 7777763 33 4589999999999999999999999999999864210000
Q ss_pred -------------c-hhh-----------h-------------hhcc--------------cC-CCCCEEEEccCCCCcc
Q 025550 173 -------------A-SLI-----------D-------------QFTS--------------DA-KKTPILWSHGMADRTV 199 (251)
Q Consensus 173 -------------~-~~~-----------~-------------~~~~--------------~~-~~~p~l~~~g~~D~~~ 199 (251)
. ... . .+.. .. .++|+++++|++|..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~ 241 (285)
T 3bwx_A 162 LQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSDIL 241 (285)
T ss_dssp HHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCSSS
T ss_pred HHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCCcc
Confidence 0 000 0 0000 00 2799999999999999
Q ss_pred cchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHH
Q 025550 200 LFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWI 242 (251)
Q Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l 242 (251)
+.+.++ .+.+. ...++++++++||....+. .+.+.+||
T Consensus 242 ~~~~~~----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~i~~fl 282 (285)
T 3bwx_A 242 SAQTAA----KMASR-PGVELVTLPRIGHAPTLDEPESIAAIGRLL 282 (285)
T ss_dssp CHHHHH----HHHTS-TTEEEEEETTCCSCCCSCSHHHHHHHHHHH
T ss_pred CHHHHH----HHHhC-CCcEEEEeCCCCccchhhCchHHHHHHHHH
Confidence 877544 34444 4689999999999876443 33444444
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=150.97 Aligned_cols=212 Identities=14% Similarity=0.141 Sum_probs=130.2
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW 93 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w 93 (251)
.++..+..|+..+. ....+.|+||++||++++...| ..+++.+.+.|+.++.+|++.... +. ..|
T Consensus 35 ~~~~~l~~~~~~P~-----~~~~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~-p~--------~~~ 100 (304)
T 3d0k_A 35 NADRPFTLNTYRPY-----GYTPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIW-PG--------VES 100 (304)
T ss_dssp CTTCCEEEEEEECT-----TCCTTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTS-CH--------HHH
T ss_pred CCCceEEEEEEeCC-----CCCCCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccC-CC--------ccc
Confidence 44555665544322 1124679999999999988777 557788888999999999985421 00 011
Q ss_pred ccccCC-CCCCCC----CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEec-
Q 025550 94 FDIHEI-PVTASS----PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFS- 166 (251)
Q Consensus 94 ~~~~~~-~~~~~~----~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~- 166 (251)
|+.... +.+... .....++.+.++++.+ +..++.++++|+|||+||.+++.++.++|+ .++++++.+
T Consensus 101 ~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~ 174 (304)
T 3d0k_A 101 YNNGRAFTAAGNPRHVDGWTYALVARVLANIRA------AEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANP 174 (304)
T ss_dssp TTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHH------TTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESC
T ss_pred cccCccccccCCCCcccchHHHHHHHHHHHHHh------ccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecC
Confidence 100000 000000 0111223333332221 346788999999999999999999999995 688888665
Q ss_pred cCCCCcchh------------hhhhcccCCCCCEEEEccCCCCccc-----------------chhcccchHHHH----h
Q 025550 167 GWVPFNASL------------IDQFTSDAKKTPILWSHGMADRTVL-----------------FEAGQAGPPFLE----Q 213 (251)
Q Consensus 167 ~~~~~~~~~------------~~~~~~~~~~~p~l~~~g~~D~~~~-----------------~~~~~~~~~~l~----~ 213 (251)
++....... .........++|+++++|+.|..+. .+.++.+++.++ +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 254 (304)
T 3d0k_A 175 GWYTLPTFEHRFPEGLDGVGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHYYEAGQRAAAQ 254 (304)
T ss_dssp SSCCCSSTTSBTTTSSBTTTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccCccccCCCCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHHHHHHHHHHHh
Confidence 543322110 0000011246899999999998742 123344555554 5
Q ss_pred cCCe--eEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 214 AGIS--CEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 214 ~~~~--~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+ ++++++||++|.+. ...+.+.+||.....
T Consensus 255 ~g~~~~~~~~~~pg~gH~~~-~~~~~~~~~~~~~~~ 289 (304)
T 3d0k_A 255 RGLPFGWQLQVVPGIGHDGQ-AMSQVCASLWFDGRM 289 (304)
T ss_dssp HTCCCCCEEEEETTCCSCHH-HHHHHHHHHHHTSSC
T ss_pred cCCCcceEEEEeCCCCCchH-HHHHHHHHHHhhhhC
Confidence 6766 99999999999984 456778888766543
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=150.30 Aligned_cols=175 Identities=15% Similarity=0.181 Sum_probs=125.0
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.|||+||++++...|..+++.|.+. |.++++|+||++.+... .....++.+.++++
T Consensus 17 ~~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~~~----------------------~~~~~~~~~~~~dl 73 (269)
T 2xmz_A 17 QVLVFLHGFLSDSRTYHNHIEKFTDN-YHVITIDLPGHGEDQSS----------------------MDETWNFDYITTLL 73 (269)
T ss_dssp EEEEEECCTTCCGGGGTTTHHHHHTT-SEEEEECCTTSTTCCCC----------------------TTSCCCHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHhhc-CeEEEecCCCCCCCCCC----------------------CCCccCHHHHHHHH
Confidence 46999999999999999999988764 99999999988664211 00023455667777
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-------------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------- 174 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------- 174 (251)
.++++ .. +.+++.|+||||||.+++.+|.++|++++++|++++.......
T Consensus 74 ~~~l~---~l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (269)
T 2xmz_A 74 DRILD---KY--KDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELF 148 (269)
T ss_dssp HHHHG---GG--TTSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHH---Hc--CCCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHH
Confidence 77766 33 3468999999999999999999999999999999864321100
Q ss_pred ---------hhh----------hh-----------------------------cccCCCCCEEEEccCCCCcccchhccc
Q 025550 175 ---------LID----------QF-----------------------------TSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 175 ---------~~~----------~~-----------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
+.. .+ ....+++|+++++|++|..++.+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~- 227 (269)
T 2xmz_A 149 VNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK- 227 (269)
T ss_dssp HHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-
T ss_pred HHHHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-
Confidence 000 00 00136799999999999998876532
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+. -...++++++++||....+..+.+.+.+.+++.
T Consensus 228 ~~~~----~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 264 (269)
T 2xmz_A 228 MANL----IPNSKCKLISATGHTIHVEDSDEFDTMILGFLK 264 (269)
T ss_dssp HHHH----STTEEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHhh----CCCcEEEEeCCCCCChhhcCHHHHHHHHHHHHH
Confidence 3332 235799999999999876666555555555543
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-21 Score=153.15 Aligned_cols=194 Identities=13% Similarity=0.147 Sum_probs=132.5
Q ss_pred ccEEEEEecCCCCCCC---------chhhhh---hhcCCCcceEEEEccC-CCCCCcccCCCC-cCCccccccCCCCCCC
Q 025550 39 RNFILWLHGLGDSGPA---------NEPIKT---LFTSPEFKLTKWSFPS-APNNPVTCNYGA-VMPSWFDIHEIPVTAS 104 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~---------~~~~~~---~~~~~g~~~~~~~~~~-~~~~~~~~~~g~-~~~~w~~~~~~~~~~~ 104 (251)
.|+|||+||++++... |..++. .|.+.||.++.+|+|+ ++.+........ ....|..
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~--------- 129 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGS--------- 129 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGG---------
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccc---------
Confidence 5899999999999988 888875 4767999999999998 343211100000 0000000
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEE-EEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch---------
Q 025550 105 SPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVF-VCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS--------- 174 (251)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~--------- 174 (251)
.....++.+.++++.++++ .. +.++++ |+||||||.+++.+|.++|++++++|++++.......
T Consensus 130 -~~~~~~~~~~~~~l~~~l~---~l--~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 203 (377)
T 2b61_A 130 -QFPNIVVQDIVKVQKALLE---HL--GISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNHVMR 203 (377)
T ss_dssp -GCCCCCHHHHHHHHHHHHH---HT--TCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHHHHH
T ss_pred -cCCcccHHHHHHHHHHHHH---Hc--CCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccchhHHHHHH
Confidence 0002345566667766666 33 345787 9999999999999999999999999999884321100
Q ss_pred ----------------------------h--------------------------------hh-----------------
Q 025550 175 ----------------------------L--------------------------------ID----------------- 177 (251)
Q Consensus 175 ----------------------------~--------------------------------~~----------------- 177 (251)
. ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T 2b61_A 204 QAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDAN 283 (377)
T ss_dssp HHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhccccChh
Confidence 0 00
Q ss_pred ---------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC-CCCCCCCHHHH
Q 025550 178 ---------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP-GLGHSISNEEL 235 (251)
Q Consensus 178 ---------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~-g~~H~~~~~~~ 235 (251)
......+++|+++++|++|.+++.+.+....+.+.+.....++++++ ++||....+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~gH~~~~e~p 363 (377)
T 2b61_A 284 SYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFLVDY 363 (377)
T ss_dssp HHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHHHCH
T ss_pred HHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCCchhhhcCH
Confidence 00012367899999999999999855555666676666678999999 99999877666
Q ss_pred HHHHHHHHHhhc
Q 025550 236 RNLESWIKTRMS 247 (251)
Q Consensus 236 ~~~~~~l~~~l~ 247 (251)
+.+.+.|.++|.
T Consensus 364 ~~~~~~i~~fl~ 375 (377)
T 2b61_A 364 DQFEKRIRDGLA 375 (377)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 666666666654
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=150.73 Aligned_cols=176 Identities=18% Similarity=0.212 Sum_probs=126.3
Q ss_pred cEEEEEecCC---CCCCCchhhh-hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 40 NFILWLHGLG---DSGPANEPIK-TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 40 ~~vv~~HG~~---~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+.|||+||++ .+...|..+. +.|.+. |.++.+|+|+++.+... .....+....
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~ 93 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAG-YRVILLDCPGWGKSDSV----------------------VNSGSRSDLN 93 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHTT-CEEEEECCTTSTTSCCC----------------------CCSSCHHHHH
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhcC-CeEEEEcCCCCCCCCCC----------------------CccccCHHHH
Confidence 3899999987 4455677777 777654 99999999988654211 1112355666
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc------c----------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN------A---------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~------~---------------- 173 (251)
++++.++++ .. +.++++|+||||||.+++.+|.++|++++++|++++..... .
T Consensus 94 ~~~l~~~l~---~l--~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1u2e_A 94 ARILKSVVD---QL--DIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTI 168 (289)
T ss_dssp HHHHHHHHH---HT--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHH---Hh--CCCceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchH
Confidence 667777666 33 34689999999999999999999999999999987643100 0
Q ss_pred -------------------hhh----h--------------h------------hcccCCCCCEEEEccCCCCcccchhc
Q 025550 174 -------------------SLI----D--------------Q------------FTSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 174 -------------------~~~----~--------------~------------~~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
... . . ....++++|+++++|++|..++.+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 248 (289)
T 1u2e_A 169 ENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAG 248 (289)
T ss_dssp HHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHH
T ss_pred HHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHH
Confidence 000 0 0 00123689999999999999998877
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.+.+. ..++++++++||....+..+.+.+.+.++|.
T Consensus 249 ~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 249 LRLLSGIA----GSELHIFRDCGHWAQWEHADAFNQLVLNFLA 287 (289)
T ss_dssp HHHHHHST----TCEEEEESSCCSCHHHHTHHHHHHHHHHHHT
T ss_pred HHHHhhCC----CcEEEEeCCCCCchhhcCHHHHHHHHHHHhc
Confidence 66655553 3588999999999887777777777777764
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=150.87 Aligned_cols=179 Identities=17% Similarity=0.211 Sum_probs=124.2
Q ss_pred ccEEEEEecCC---CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLG---DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.+.|||+||++ ++...|..+++.|.+. |.++.+|+||++.+. . .....++.+.
T Consensus 36 g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G~S~-~----------------------~~~~~~~~~~ 91 (296)
T 1j1i_A 36 GQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFGKTA-K----------------------PDIEYTQDRR 91 (296)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTSTTSC-C----------------------CSSCCCHHHH
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCCCCC-C----------------------CCCCCCHHHH
Confidence 36799999987 5556677788888755 999999999886642 1 0011234555
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc----------------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA---------------------- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~---------------------- 173 (251)
++++.++++ ..++ .+++.|+||||||.+++.+|.++|++++++|++++......
T Consensus 92 ~~dl~~~l~---~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (296)
T 1j1i_A 92 IRHLHDFIK---AMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLV 167 (296)
T ss_dssp HHHHHHHHH---HSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHH
T ss_pred HHHHHHHHH---hcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHH
Confidence 667777666 3333 16899999999999999999999999999999887431100
Q ss_pred ------------hhh----hh-------------h--------------cccCCCCCEEEEccCCCCcccchhcccchHH
Q 025550 174 ------------SLI----DQ-------------F--------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPF 210 (251)
Q Consensus 174 ------------~~~----~~-------------~--------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~ 210 (251)
... .. + ....+++|+++++|++|.+++.+.++.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~ 247 (296)
T 1j1i_A 168 KALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDL 247 (296)
T ss_dssp HHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHH
Confidence 000 00 0 0124789999999999999998876665555
Q ss_pred HHhcCCeeEEEEeCCCCCCCCHHHH----HHHHHHHHHhhcCC
Q 025550 211 LEQAGISCEFKAYPGLGHSISNEEL----RNLESWIKTRMSCS 249 (251)
Q Consensus 211 l~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~l~~~ 249 (251)
+. ..++++++++||....+.. +.+.+||.+.+..+
T Consensus 248 ~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 286 (296)
T 1j1i_A 248 ID----DSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRVDIT 286 (296)
T ss_dssp CT----TEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC----
T ss_pred CC----CCEEEEECCCCCCchhcCHHHHHHHHHHHHhccCCcC
Confidence 43 4689999999998765543 45666776665433
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=146.66 Aligned_cols=177 Identities=11% Similarity=0.043 Sum_probs=126.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+||++||++++...|..+++.|.+ +|.++.+|+|+++.+.. +....++.+.++
T Consensus 20 ~~~~vv~lHG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~-----------------------~~~~~~~~~~~~ 75 (264)
T 3ibt_A 20 HAPTLFLLSGWCQDHRLFKNLAPLLAR-DFHVICPDWRGHDAKQT-----------------------DSGDFDSQTLAQ 75 (264)
T ss_dssp SSCEEEEECCTTCCGGGGTTHHHHHTT-TSEEEEECCTTCSTTCC-----------------------CCSCCCHHHHHH
T ss_pred CCCeEEEEcCCCCcHhHHHHHHHHHHh-cCcEEEEccccCCCCCC-----------------------CccccCHHHHHH
Confidence 467999999999999999999998864 59999999998765421 112234556667
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccCCCCcchhhh-------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGWVPFNASLID------------------- 177 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~~~~~~~~~~------------------- 177 (251)
++.++++. . +.+++.|+|||+||.+++.+|.++ |+.++++|++++..........
T Consensus 76 ~~~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T 3ibt_A 76 DLLAFIDA---K--GIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQSFF 150 (264)
T ss_dssp HHHHHHHH---T--TCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHHHHH
T ss_pred HHHHHHHh---c--CCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHHHHH
Confidence 77777763 3 345899999999999999999999 9999999999875411110000
Q ss_pred ------------------h---------------------------hcccCCCCCEEEEccCCCC--cccchhcccchHH
Q 025550 178 ------------------Q---------------------------FTSDAKKTPILWSHGMADR--TVLFEAGQAGPPF 210 (251)
Q Consensus 178 ------------------~---------------------------~~~~~~~~p~l~~~g~~D~--~~~~~~~~~~~~~ 210 (251)
. .....+++|+++++|..|. ..+.+.. +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~----~~ 226 (264)
T 3ibt_A 151 DEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQ----LE 226 (264)
T ss_dssp HHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHH----HH
T ss_pred HHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHH----HH
Confidence 0 0002468999999764443 3333333 33
Q ss_pred HHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 211 LEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 211 l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.-...++++++|+||....+..+.+.+.|.++|+
T Consensus 227 ~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 227 FAAGHSWFHPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHCTTEEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred HHHhCCCceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 3333345799999999999888888888888877774
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=147.79 Aligned_cols=104 Identities=21% Similarity=0.332 Sum_probs=78.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++++...|..+++.|.+.+|.++.+|+||++.+... ...++.+.++
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~------------------------~~~~~~~~a~ 70 (264)
T 1r3d_A 15 RTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPER------------------------HCDNFAEAVE 70 (264)
T ss_dssp TBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-------------------------------CHHHH
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCC------------------------CccCHHHHHH
Confidence 3488999999999999999999999867999999999988664210 0123344456
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHH---HHHhcCCCcceEEEeccC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLA---SVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~---~a~~~p~~~~~~i~~~~~ 168 (251)
++.++++ ..+++..+++|+||||||.+++. +|.++|++++++|++++.
T Consensus 71 ~l~~~l~---~l~~~~~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 71 MIEQTVQ---AHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp HHHHHHH---TTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred HHHHHHH---HhCcCCCceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 6666665 34433234999999999999999 888899999999988763
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-20 Score=145.67 Aligned_cols=179 Identities=17% Similarity=0.172 Sum_probs=129.3
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++++...|..+++.|.+. |.++++|+||++.+..+ .. ......++.+.+++
T Consensus 29 g~~lvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~G~G~S~~~-~~------------------~~~~~~~~~~~a~d 88 (294)
T 1ehy_A 29 GPTLLLLHGWPGFWWEWSKVIGPLAEH-YDVIVPDLRGFGDSEKP-DL------------------NDLSKYSLDKAADD 88 (294)
T ss_dssp SSEEEEECCSSCCGGGGHHHHHHHHTT-SEEEEECCTTSTTSCCC-CT------------------TCGGGGCHHHHHHH
T ss_pred CCEEEEECCCCcchhhHHHHHHHHhhc-CEEEecCCCCCCCCCCC-cc------------------ccccCcCHHHHHHH
Confidence 468999999999999999999988765 99999999988664211 00 00002456667778
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--------------------hhh--
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--------------------SLI-- 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--------------------~~~-- 176 (251)
+.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|++++..+... ...
T Consensus 89 l~~ll~---~l~--~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
T 1ehy_A 89 QAALLD---ALG--IEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVE 163 (294)
T ss_dssp HHHHHH---HTT--CCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHHHH
T ss_pred HHHHHH---HcC--CCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcchhHH
Confidence 888777 344 45899999999999999999999999999999886321000 000
Q ss_pred ---------h---------------h--------h-------------------------c-c-c----CCCCCEEEEcc
Q 025550 177 ---------D---------------Q--------F-------------------------T-S-D----AKKTPILWSHG 193 (251)
Q Consensus 177 ---------~---------------~--------~-------------------------~-~-~----~~~~p~l~~~g 193 (251)
. . + . . . .+++|+++++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G 243 (294)
T 1ehy_A 164 VVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWG 243 (294)
T ss_dssp HHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEE
T ss_pred HhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEEEe
Confidence 0 0 0 0 0 1 46789999999
Q ss_pred CCCCcccc-hhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 194 MADRTVLF-EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 194 ~~D~~~~~-~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++|..++. +..+ .+++.-...++++++++||....+..+.+.+.|.++|
T Consensus 244 ~~D~~~~~~~~~~----~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 244 LGDTCVPYAPLIE----FVPKYYSNYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp CCSSCCTTHHHHH----HHHHHBSSEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred CCCCCcchHHHHH----HHHHHcCCCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 99998874 3333 3333333579999999999998888888888887776
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=148.69 Aligned_cols=178 Identities=12% Similarity=0.028 Sum_probs=123.4
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|+||++||++++...|..+++.|.+. +.++.+|+|+++.+..... ......++.+.+++
T Consensus 29 ~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~~~-------------------~~~~~~~~~~~~~~ 88 (302)
T 1mj5_A 29 GDPILFQHGNPTSSYLWRNIMPHCAGL-GRLIACDLIGMGDSDKLDP-------------------SGPERYAYAEHRDY 88 (302)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTTS-SEEEEECCTTSTTSCCCSS-------------------CSTTSSCHHHHHHH
T ss_pred CCEEEEECCCCCchhhhHHHHHHhccC-CeEEEEcCCCCCCCCCCCC-------------------CCcccccHHHHHHH
Confidence 478999999999999999999988755 7999999998765421100 00111345566677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------- 173 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------- 173 (251)
+.++++. .+. .++++|+|||+||.+++.++.++|++++++|++++......
T Consensus 89 ~~~~l~~---l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (302)
T 1mj5_A 89 LDALWEA---LDL-GDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEELVL 164 (302)
T ss_dssp HHHHHHH---TTC-TTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHHHT
T ss_pred HHHHHHH---hCC-CceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhhhc
Confidence 7777763 332 16899999999999999999999999999999988653100
Q ss_pred ---hhh----------------------------h----------hh------------------cccCCCCCEEEEccC
Q 025550 174 ---SLI----------------------------D----------QF------------------TSDAKKTPILWSHGM 194 (251)
Q Consensus 174 ---~~~----------------------------~----------~~------------------~~~~~~~p~l~~~g~ 194 (251)
.+. . .+ ....+++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~g~ 244 (302)
T 1mj5_A 165 QDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFINAE 244 (302)
T ss_dssp TTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEEEE
T ss_pred ChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEEeC
Confidence 000 0 00 001368999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
+|.+++.+.++.+.+.+ .. +++++ ++||....+..+.+.+.+.+++
T Consensus 245 ~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl 290 (302)
T 1mj5_A 245 PGALTTGRMRDFCRTWP----NQ-TEITV-AGAHFIQEDSPDEIGAAIAAFV 290 (302)
T ss_dssp ECSSSSHHHHHHHTTCS----SE-EEEEE-EESSCGGGTCHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHhc----CC-ceEEe-cCcCcccccCHHHHHHHHHHHH
Confidence 99999987554443333 34 88888 8999987555444444444443
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-20 Score=143.93 Aligned_cols=178 Identities=17% Similarity=0.180 Sum_probs=122.4
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|||+||++++.. +..+...+...+|.++.+|+||++.+.... .....+..+.+++
T Consensus 37 g~~vvllHG~~~~~~-~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~d 94 (317)
T 1wm1_A 37 GKPAVFIHGGPGGGI-SPHHRQLFDPERYKVLLFDQRGCGRSRPHA---------------------SLDNNTTWHLVAD 94 (317)
T ss_dssp SEEEEEECCTTTCCC-CGGGGGGSCTTTEEEEEECCTTSTTCBSTT---------------------CCTTCSHHHHHHH
T ss_pred CCcEEEECCCCCccc-chhhhhhccccCCeEEEECCCCCCCCCCCc---------------------ccccccHHHHHHH
Confidence 356999999876553 333445566689999999999886642110 0011234455666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc--------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-------------------------- 172 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-------------------------- 172 (251)
+.++++ .. +.+++.|+||||||.+++.+|.++|++++++|++++.....
T Consensus 95 l~~l~~---~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (317)
T 1wm1_A 95 IERLRE---MA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSIL 169 (317)
T ss_dssp HHHHHH---HT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTTS
T ss_pred HHHHHH---Hc--CCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHHhhc
Confidence 666666 33 34689999999999999999999999999999886432100
Q ss_pred ---ch----------h---------------------------hh-------------------------hh-c------
Q 025550 173 ---AS----------L---------------------------ID-------------------------QF-T------ 180 (251)
Q Consensus 173 ---~~----------~---------------------------~~-------------------------~~-~------ 180 (251)
.. . .. .+ .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (317)
T 1wm1_A 170 SDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQLL 249 (317)
T ss_dssp CTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHHH
T ss_pred cchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccchhhH
Confidence 00 0 00 00 0
Q ss_pred --ccCC-CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHH-HHHHHHHHHHHhhc
Q 025550 181 --SDAK-KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE-ELRNLESWIKTRMS 247 (251)
Q Consensus 181 --~~~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~-~~~~~~~~l~~~l~ 247 (251)
...+ ++|+++++|++|.+++.+.++.+.+.+. +.++++++++||....+ ..+.+.+.+.++++
T Consensus 250 ~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p----~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 250 RNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP----EAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp HTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT----TSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred hhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCC----CceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 0113 5999999999999999887666665553 35899999999988654 57888888888875
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=149.80 Aligned_cols=177 Identities=15% Similarity=0.105 Sum_probs=128.4
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.||++||++++...|..+++.|.+ ||.++.+|+|+++.+.. .....++.+.++
T Consensus 50 ~~~~lvllHG~~~~~~~~~~l~~~L~~-~~~v~~~D~~G~G~S~~-----------------------~~~~~~~~~~a~ 105 (280)
T 3qmv_A 50 APLRLVCFPYAGGTVSAFRGWQERLGD-EVAVVPVQLPGRGLRLR-----------------------ERPYDTMEPLAE 105 (280)
T ss_dssp CSEEEEEECCTTCCGGGGTTHHHHHCT-TEEEEECCCTTSGGGTT-----------------------SCCCCSHHHHHH
T ss_pred CCceEEEECCCCCChHHHHHHHHhcCC-CceEEEEeCCCCCCCCC-----------------------CCCCCCHHHHHH
Confidence 348899999999999999999999986 99999999998754310 112345666677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcc----eEEEeccCCCCcch-----------hh------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG----GGAIFSGWVPFNAS-----------LI------ 176 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~----~~i~~~~~~~~~~~-----------~~------ 176 (251)
++.+.++. .. +.++++|+|||+||.+++.+|.++|+.+. .+++.+...+.... +.
T Consensus 106 ~~~~~l~~---~~-~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 181 (280)
T 3qmv_A 106 AVADALEE---HR-LTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDL 181 (280)
T ss_dssp HHHHHHHH---TT-CSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHH---hC-CCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHh
Confidence 77777663 21 35789999999999999999999987766 66665543221100 00
Q ss_pred ----------------------------hhhc---ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC
Q 025550 177 ----------------------------DQFT---SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG 225 (251)
Q Consensus 177 ----------------------------~~~~---~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 225 (251)
..+. ....++|+++++|++|.+++.+.++.+.+.+. ...+++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g 258 (280)
T 3qmv_A 182 GGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT---GSFLRRHLPG 258 (280)
T ss_dssp TCCC---------CCTTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS---SCEEEEEEEE
T ss_pred CCCChhhhcCHHHHHHHHHHHHHHHHHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcC---CceEEEEecC
Confidence 0000 12468999999999999999887766665543 2467888886
Q ss_pred CCCCCCH--HHHHHHHHHHHHhh
Q 025550 226 LGHSISN--EELRNLESWIKTRM 246 (251)
Q Consensus 226 ~~H~~~~--~~~~~~~~~l~~~l 246 (251)
||.... +..+.+.+.|.++|
T Consensus 259 -gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 259 -NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp -ETTGGGSSHHHHHHHHHHHTTC
T ss_pred -CCeEEcCchhHHHHHHHHHhhC
Confidence 999887 88888888887764
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.1e-20 Score=143.32 Aligned_cols=176 Identities=15% Similarity=0.168 Sum_probs=120.2
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.||++||++++.. +..+...+...+|.++++|+||++.+.... ........+.+++
T Consensus 34 g~pvvllHG~~~~~~-~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~d 91 (313)
T 1azw_A 34 GKPVVMLHGGPGGGC-NDKMRRFHDPAKYRIVLFDQRGSGRSTPHA---------------------DLVDNTTWDLVAD 91 (313)
T ss_dssp SEEEEEECSTTTTCC-CGGGGGGSCTTTEEEEEECCTTSTTSBSTT---------------------CCTTCCHHHHHHH
T ss_pred CCeEEEECCCCCccc-cHHHHHhcCcCcceEEEECCCCCcCCCCCc---------------------ccccccHHHHHHH
Confidence 466999999876553 333445566689999999999886642110 0011234455666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc--------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN-------------------------- 172 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~-------------------------- 172 (251)
+.++++ ..+ .+++.|+||||||.+++.+|.++|++++++|++++.....
T Consensus 92 l~~l~~---~l~--~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (313)
T 1azw_A 92 IERLRT---HLG--VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAI 166 (313)
T ss_dssp HHHHHH---HTT--CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHHTS
T ss_pred HHHHHH---HhC--CCceEEEEECHHHHHHHHHHHhChhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHHHHhhcc
Confidence 666666 333 4589999999999999999999999999999887532100
Q ss_pred -------------------ch-------------------h---h-------------------------hhhcc-----
Q 025550 173 -------------------AS-------------------L---I-------------------------DQFTS----- 181 (251)
Q Consensus 173 -------------------~~-------------------~---~-------------------------~~~~~----- 181 (251)
.. . . ..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
T 1azw_A 167 PPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVEDQL 246 (313)
T ss_dssp CGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred CchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhcccccccccchh
Confidence 00 0 0 00000
Q ss_pred ----cCC-CCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-HHHHHHHHHHHHh
Q 025550 182 ----DAK-KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-EELRNLESWIKTR 245 (251)
Q Consensus 182 ----~~~-~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~ 245 (251)
..+ ++|+++++|++|.+++++.++.+.+.+. ..++++++++||.... +..+.+++++.++
T Consensus 247 ~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 247 LRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP----KAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT----TSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCC----CcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 013 4999999999999999887766665553 3589999999998754 4467788877764
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-20 Score=144.39 Aligned_cols=177 Identities=13% Similarity=0.033 Sum_probs=122.9
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|+||++||++++...|..+++.|.+ +|.++.+|+|+++.+..... ......+..+.+++
T Consensus 28 ~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-------------------~~~~~~~~~~~~~~ 87 (297)
T 2qvb_A 28 GDAIVFQHGNPTSSYLWRNIMPHLEG-LGRLVACDLIGMGASDKLSP-------------------SGPDRYSYGEQRDF 87 (297)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSS-------------------CSTTSSCHHHHHHH
T ss_pred CCeEEEECCCCchHHHHHHHHHHHhh-cCeEEEEcCCCCCCCCCCCC-------------------ccccCcCHHHHHHH
Confidence 47899999999999999999998875 49999999998765421100 00111345566677
Q ss_pred HHHHHHHHHHcCCCC-CcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------------------
Q 025550 119 VHAMIDKEVAAGIDP-NNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------------------ 173 (251)
Q Consensus 119 l~~~i~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------------------ 173 (251)
+.++++. . +. ++++++|||+||.+++.++.++|++++++|++++......
T Consensus 88 ~~~~l~~---~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (297)
T 2qvb_A 88 LFALWDA---L--DLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPMA 162 (297)
T ss_dssp HHHHHHH---T--TCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHHH
T ss_pred HHHHHHH---c--CCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhhh
Confidence 7777763 3 34 6899999999999999999999999999999998653100
Q ss_pred ----hhh----------------------------h----------hh------------------cccCCCCCEEEEcc
Q 025550 174 ----SLI----------------------------D----------QF------------------TSDAKKTPILWSHG 193 (251)
Q Consensus 174 ----~~~----------------------------~----------~~------------------~~~~~~~p~l~~~g 193 (251)
... . .+ ....+++|+++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 242 (297)
T 2qvb_A 163 LEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINA 242 (297)
T ss_dssp HTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEEE
T ss_pred ccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEec
Confidence 000 0 00 00136899999999
Q ss_pred CCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 194 MADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
++|.+++.+.++.+. +.-.. +++++ ++||....+..+.+.+.|.+++
T Consensus 243 ~~D~~~~~~~~~~~~----~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl 289 (297)
T 2qvb_A 243 EPGAIITGRIRDYVR----SWPNQ-TEITV-PGVHFVQEDSPEEIGAAIAQFV 289 (297)
T ss_dssp EECSSSCHHHHHHHH----TSSSE-EEEEE-EESSCGGGTCHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHH----HHcCC-eEEEe-cCccchhhhCHHHHHHHHHHHH
Confidence 999999987554443 33334 88888 8999877555444444443333
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=154.33 Aligned_cols=206 Identities=11% Similarity=0.107 Sum_probs=131.5
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCC-----CCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY-----GAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
+.+.|+||++||++++...|..+++.|+++||.++.+|+++.+.+...... ......|+................
T Consensus 95 ~~~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 95 GEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp SSCEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 457899999999999999999999999999999999999976543210000 001123432221100000000001
Q ss_pred HHHHHHHHHHHHHHHHH---------------------HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 111 SLLKAVRNVHAMIDKEV---------------------AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~---------------------~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
.+...++++...++.+. ...++.++|+++|||+||.+++.++...+ +++++|+++|+.
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~~~~ 253 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALDAWM 253 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeCCcc
Confidence 12222344444444332 12346679999999999999999888776 599999999976
Q ss_pred CCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC------------------
Q 025550 170 PFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS------------------ 231 (251)
Q Consensus 170 ~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~------------------ 231 (251)
..... . .....++|+++++|++|..++ ..+ ..+.+.+.+.+.++++++|++|.+.
T Consensus 254 ~p~~~--~--~~~~i~~P~Lii~g~~D~~~~--~~~-~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~ 326 (383)
T 3d59_A 254 FPLGD--E--VYSRIPQPLFFINSEYFQYPA--NII-KMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLK 326 (383)
T ss_dssp TTCCG--G--GGGSCCSCEEEEEETTTCCHH--HHH-HHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSS
T ss_pred CCCch--h--hhccCCCCEEEEecccccchh--hHH-HHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhccc
Confidence 42211 1 113467999999999997543 222 2344555567899999999999752
Q ss_pred ----HH----HH-HHHHHHHHHhhcCC
Q 025550 232 ----NE----EL-RNLESWIKTRMSCS 249 (251)
Q Consensus 232 ----~~----~~-~~~~~~l~~~l~~~ 249 (251)
.+ .. +.+.+||+++|+..
T Consensus 327 g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 327 GDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 11 12 35889999998743
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.7e-20 Score=140.81 Aligned_cols=186 Identities=12% Similarity=0.083 Sum_probs=129.9
Q ss_pred cEEEEEecCC--CCCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 40 NFILWLHGLG--DSGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 40 ~~vv~~HG~~--~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
|+||++||++ .+...|.. +.+.+.+.|+.++.+|+.+. .|+..... ....... ..
T Consensus 35 p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~--------------~~~~~~~~----~~~~~~~--~~ 94 (280)
T 1r88_A 35 HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAY--------------SMYTNWEQ----DGSKQWD--TF 94 (280)
T ss_dssp SEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTT--------------STTSBCSS----CTTCBHH--HH
T ss_pred CEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCC--------------CccCCCCC----CCCCcHH--HH
Confidence 7999999995 45555654 45667778898887776421 12110000 0001111 22
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh------------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------------ 176 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------------ 176 (251)
..+++...++. +.+++.++++|+|+||||.+++.++.++|+.++++++++|.........
T Consensus 95 ~~~~l~~~i~~--~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (280)
T 1r88_A 95 LSAELPDWLAA--NRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNG 172 (280)
T ss_dssp HHTHHHHHHHH--HSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHCCCTHH
T ss_pred HHHHHHHHHHH--HCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHHhhhccccchhh
Confidence 23455555553 3677778999999999999999999999999999999999876432110
Q ss_pred ----------hhhc----ccC---CCCCEEEEc----cCCCCc-------ccchhcccchHHHHhcC-CeeEEEEeCCCC
Q 025550 177 ----------DQFT----SDA---KKTPILWSH----GMADRT-------VLFEAGQAGPPFLEQAG-ISCEFKAYPGLG 227 (251)
Q Consensus 177 ----------~~~~----~~~---~~~p~l~~~----g~~D~~-------~~~~~~~~~~~~l~~~~-~~~~~~~~~g~~ 227 (251)
.... ..+ .+.|+++.+ |+.|.. ++.+.++++.+.|++.| .+++++++++++
T Consensus 173 ~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~ 252 (280)
T 1r88_A 173 MWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDFPASGD 252 (280)
T ss_dssp HHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCSEEEECCSSCC
T ss_pred hcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCcceEEEecCCCC
Confidence 0000 011 358999999 999983 57888899999999999 999999988789
Q ss_pred CCCC--HHHHHHHHHHHHHhhc
Q 025550 228 HSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 228 H~~~--~~~~~~~~~~l~~~l~ 247 (251)
|.+. ...+.+.+.|+.+.|+
T Consensus 253 H~~~~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 253 NGWGSWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHC
T ss_pred cChhHHHHHHHHHHHHHHHHHh
Confidence 9864 5667888888888775
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-20 Score=141.41 Aligned_cols=174 Identities=22% Similarity=0.310 Sum_probs=112.7
Q ss_pred CCccEEEEEecCC---CCCCCc-hhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLG---DSGPAN-EPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~---~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+||++||+| ++...+ ..+.+.+.+.|+.++.+|||.+|+.+ +
T Consensus 25 ~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~------------------------------~ 74 (274)
T 2qru_A 25 EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTK------------------------------I 74 (274)
T ss_dssp SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSC------------------------------H
T ss_pred CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCC------------------------------C
Confidence 4679999999988 344444 44666788889999999999876521 1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH---hcCCCcceEEEeccCCCCcch---------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL---LYPRKLGGGAIFSGWVPFNAS--------------- 174 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~---~~p~~~~~~i~~~~~~~~~~~--------------- 174 (251)
...++++.+.++.+.....+.++++|+|+|+||.+++.++. ..+..+++++.++|+......
T Consensus 75 p~~~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 2qru_A 75 DHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKE 154 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGG
T ss_pred cHHHHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHH
Confidence 22233333333333211212679999999999999999987 356678999888765431000
Q ss_pred --------------hhh---------------------------h--hcc-c-CCCCCEEEEccCCCCcccchhcccchH
Q 025550 175 --------------LID---------------------------Q--FTS-D-AKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 175 --------------~~~---------------------------~--~~~-~-~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
... . ... . ..-+|+++++|+.|..++...++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lpP~li~~G~~D~~~~~~~~~~l-- 232 (274)
T 2qru_A 155 IAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTFPPCFSTASSSDEEVPFRYSKKI-- 232 (274)
T ss_dssp GTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTSCCEEEEEETTCSSSCTHHHHHH--
T ss_pred HhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCCCCEEEEEecCCCCcCHHHHHHH--
Confidence 000 0 000 0 1126999999999998887655444
Q ss_pred HHHhcCCeeEEEEeCCCCCCCCHH----H----HHHHHHHHHH
Q 025550 210 FLEQAGISCEFKAYPGLGHSISNE----E----LRNLESWIKT 244 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~~~----~----~~~~~~~l~~ 244 (251)
.+.+.++++++++|++|.+..+ . .+.+.+||++
T Consensus 233 --~~~~~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 233 --GRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp --HHHSTTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred --HHhCCCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 4444567999999999987532 2 4556666654
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-20 Score=150.15 Aligned_cols=193 Identities=13% Similarity=0.091 Sum_probs=131.7
Q ss_pred CccEEEEEecCCCCCCC---chhhhh---hhcCCCcceEEEEccCC--CCCCccc-CCCCcCCccccccCCCCCCCCCCC
Q 025550 38 ARNFILWLHGLGDSGPA---NEPIKT---LFTSPEFKLTKWSFPSA--PNNPVTC-NYGAVMPSWFDIHEIPVTASSPKD 108 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~---~~~~~~---~~~~~g~~~~~~~~~~~--~~~~~~~-~~g~~~~~w~~~~~~~~~~~~~~~ 108 (251)
..|+||++||++++... |..++. .|...||.++.+|+||+ +.+.... ........++.. ...
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~---------~f~ 178 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGA---------KFP 178 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGG---------GCC
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCccccccccccc---------ccc
Confidence 45899999999999988 888775 57678999999999984 3321000 000000000000 001
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCc-EEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-------------
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNN-VFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------- 174 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------- 174 (251)
..++.+.++++.++++.+ + .++ ++|+||||||.+++.+|.++|++++++|++++.......
T Consensus 179 ~~t~~~~a~dl~~ll~~l---~--~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~ 253 (444)
T 2vat_A 179 RTTIRDDVRIHRQVLDRL---G--VRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIY 253 (444)
T ss_dssp CCCHHHHHHHHHHHHHHH---T--CCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhc---C--CccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHHHh
Confidence 235666677777777642 3 457 999999999999999999999999999999875431100
Q ss_pred ------------------------------------h--------h----------------------------------
Q 025550 175 ------------------------------------L--------I---------------------------------- 176 (251)
Q Consensus 175 ------------------------------------~--------~---------------------------------- 176 (251)
+ .
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (444)
T 2vat_A 254 DDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAV 333 (444)
T ss_dssp HSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGH
T ss_pred cCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchhhH
Confidence 0 0
Q ss_pred hh-------------------------------------h--cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 177 DQ-------------------------------------F--TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 177 ~~-------------------------------------~--~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
+. . ....+++|+++++|++|.+++.+.++.+.+.+. .
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p----~ 409 (444)
T 2vat_A 334 SSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP----N 409 (444)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST----T
T ss_pred HHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCC----C
Confidence 00 0 012477899999999999999887766666554 4
Q ss_pred eEEEEeC-CCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 218 CEFKAYP-GLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 218 ~~~~~~~-g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.++++++ ++||....+..+.+.+.|.++|..
T Consensus 410 ~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~~ 441 (444)
T 2vat_A 410 SRLCVVDTNEGHDFFVMEADKVNDAVRGFLDQ 441 (444)
T ss_dssp EEEEECCCSCGGGHHHHTHHHHHHHHHHHHTC
T ss_pred cEEEEeCCCCCcchHHhCHHHHHHHHHHHHHH
Confidence 6899999 899998877777777766666653
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-20 Score=142.63 Aligned_cols=192 Identities=18% Similarity=0.189 Sum_probs=131.5
Q ss_pred cEEEEEecCC--CCCCCchhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 40 NFILWLHGLG--DSGPANEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 40 ~~vv~~HG~~--~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
++||++||.+ .+...|..+. +.+.+.++.++.+|.++. .|+.....+.............+
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~--------------~~~~~~~~~~~~~g~~~~~~~~~ 95 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQS--------------SFYTDWYQPSQSNGQNYTYKWET 95 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTT--------------CTTSBCSSSCTTTTCCSCCBHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCC--------------ccccCCCCCCccccccccccHHH
Confidence 4899999995 4777776643 457778888888776421 11111000000000001112222
Q ss_pred -HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh----h-------------
Q 025550 115 -AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL----I------------- 176 (251)
Q Consensus 115 -~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~----~------------- 176 (251)
.++++..++++ +.+++.++++|+||||||.+++.++.++|+.++++++++|........ .
T Consensus 96 ~~~~~l~~~i~~--~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (280)
T 1dqz_A 96 FLTREMPAWLQA--NKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYNAN 173 (280)
T ss_dssp HHHTHHHHHHHH--HHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHHHHHH--HcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhhHHHHhhhccCcCHH
Confidence 23566666663 256776799999999999999999999999999999999987653310 0
Q ss_pred --------hhh-------cccC---CCCCEEEEccCCCC--------------cccchhcccchHHHHhcC-CeeEEEEe
Q 025550 177 --------DQF-------TSDA---KKTPILWSHGMADR--------------TVLFEAGQAGPPFLEQAG-ISCEFKAY 223 (251)
Q Consensus 177 --------~~~-------~~~~---~~~p~l~~~g~~D~--------------~~~~~~~~~~~~~l~~~~-~~~~~~~~ 223 (251)
... ...+ ...|+++.+|+.|. .++.+.++.+.+.|++.| .+++++++
T Consensus 174 ~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~ 253 (280)
T 1dqz_A 174 SMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFP 253 (280)
T ss_dssp HHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred HhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCCceEEEec
Confidence 000 0001 25899999999997 467788899999999999 99999999
Q ss_pred CCCCCCCC--HHHHHHHHHHHHHhhc
Q 025550 224 PGLGHSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 224 ~g~~H~~~--~~~~~~~~~~l~~~l~ 247 (251)
++++|.+. .+.+.+...||.+.|.
T Consensus 254 ~~g~H~~~~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 254 PNGTHSWPYWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp SCCCSSHHHHHHHHHHTHHHHHHHHH
T ss_pred CCCccChHHHHHHHHHHHHHHHHHhC
Confidence 88899863 6778888899888764
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=144.70 Aligned_cols=103 Identities=14% Similarity=0.161 Sum_probs=79.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|.|||+||++++...|..+++.|.+. +.++++|+||++.+... .....++.+.++
T Consensus 42 ~~~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~Dl~GhG~S~~~----------------------~~~~~~~~~~a~ 98 (318)
T 2psd_A 42 AENAVIFLHGNATSSYLWRHVVPHIEPV-ARCIIPDLIGMGKSGKS----------------------GNGSYRLLDHYK 98 (318)
T ss_dssp TTSEEEEECCTTCCGGGGTTTGGGTTTT-SEEEEECCTTSTTCCCC----------------------TTSCCSHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHhhhc-CeEEEEeCCCCCCCCCC----------------------CCCccCHHHHHH
Confidence 3468999999999999999999988754 79999999988664211 011124555566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
++.++++ ..++ .++++|+||||||.+++.+|.++|++++++|++++
T Consensus 99 dl~~ll~---~l~~-~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 99 YLTAWFE---LLNL-PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp HHHHHHT---TSCC-CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred HHHHHHH---hcCC-CCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 6766666 3333 16899999999999999999999999999998764
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-19 Score=136.70 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=81.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++++...|..+++.|. .+|.++++|+||++.+.. +....++.+.++
T Consensus 26 ~~p~vvllHG~~~~~~~w~~~~~~L~-~~~rvia~DlrGhG~S~~-----------------------~~~~~~~~~~a~ 81 (276)
T 2wj6_A 26 DGPAILLLPGWCHDHRVYKYLIQELD-ADFRVIVPNWRGHGLSPS-----------------------EVPDFGYQEQVK 81 (276)
T ss_dssp SSCEEEEECCTTCCGGGGHHHHHHHT-TTSCEEEECCTTCSSSCC-----------------------CCCCCCHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHh-cCCEEEEeCCCCCCCCCC-----------------------CCCCCCHHHHHH
Confidence 34789999999999999999999887 579999999998865421 111234666677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEecc
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSG 167 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~ 167 (251)
++.++++. .+ .+++.|+||||||.+++.+|.++ |++++++|++++
T Consensus 82 dl~~ll~~---l~--~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 82 DALEILDQ---LG--VETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp HHHHHHHH---HT--CCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred HHHHHHHH---hC--CCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 78787774 33 45899999999999999999999 999999999865
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.7e-20 Score=143.05 Aligned_cols=175 Identities=14% Similarity=0.106 Sum_probs=123.0
Q ss_pred CccEEEEEecC--CCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 38 ARNFILWLHGL--GDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 38 ~~~~vv~~HG~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..|+|||+||+ +++...|..+++.|. .+|.++.+|+|+++.+... .....++.+.
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~----------------------~~~~~~~~~~ 96 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVS----------------------NQANVGLRDW 96 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCC----------------------CCTTCCHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCC----------------------CcccccHHHH
Confidence 34899999965 455668888998887 7999999999987654200 1123456666
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc---------CCC-Cc-----------c-
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG---------WVP-FN-----------A- 173 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~---------~~~-~~-----------~- 173 (251)
++++.++++ ..+ .++++|+|||+||.+++.+|.++|+.++++|++++ ... .. .
T Consensus 97 ~~~l~~~l~---~~~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (292)
T 3l80_A 97 VNAILMIFE---HFK--FQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTA 171 (292)
T ss_dssp HHHHHHHHH---HSC--CSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSH
T ss_pred HHHHHHHHH---HhC--CCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhcc
Confidence 777777776 333 45899999999999999999999999999999983 222 00 0
Q ss_pred -----hh--------hhh------------------hcc------------------cCCCCCEEEEccCCCCcccchhc
Q 025550 174 -----SL--------IDQ------------------FTS------------------DAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 174 -----~~--------~~~------------------~~~------------------~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
.. ... ... -..++|+++++|++|..++.+ +
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~P~lii~g~~D~~~~~~-~ 250 (292)
T 3l80_A 172 ADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISEKIPSIVFSESFREKEYLE-S 250 (292)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCTTSCEEEEECGGGHHHHHT-S
T ss_pred CchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCCCCCEEEEEccCccccchH-H
Confidence 00 000 000 002789999999999998887 5
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+.+.. .+ +++++++|....+..+.+.+.|.+++.
T Consensus 251 -~~~~~~~~----~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~ 287 (292)
T 3l80_A 251 -EYLNKHTQ----TK-LILCGQHHYLHWSETNSILEKVEQLLS 287 (292)
T ss_dssp -TTCCCCTT----CE-EEECCSSSCHHHHCHHHHHHHHHHHHH
T ss_pred -HHhccCCC----ce-eeeCCCCCcchhhCHHHHHHHHHHHHH
Confidence 55544433 35 889999999887766666666666654
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-18 Score=139.14 Aligned_cols=195 Identities=13% Similarity=0.124 Sum_probs=130.9
Q ss_pred CCccEEEEEecCCCCCCC------c--hhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCC
Q 025550 37 MARNFILWLHGLGDSGPA------N--EPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPK 107 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~------~--~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~ 107 (251)
.+.|+|++.||.+..... . ..++..|+ ++||.++.+|+++.+.+... ...+... ..
T Consensus 72 ~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~------~~~~~~~---------~~ 136 (377)
T 4ezi_A 72 GQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELT------LHPYVQA---------ET 136 (377)
T ss_dssp SCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCS------SCCTTCH---------HH
T ss_pred CCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCC------Ccccccc---------hh
Confidence 578999999998743221 0 12344677 89999999999987653210 0111000 00
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCC-CCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcch-------
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNAS------- 174 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~------- 174 (251)
...++.+.+..+..+++ ..++ +.++++++|||+||.+++.++...|+ .+.+++..++..+....
T Consensus 137 ~~~~~~D~~~a~~~~~~---~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~~~~~~~~ 213 (377)
T 4ezi_A 137 LASSSIDMLFAAKELAN---RLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEETMHFVMLE 213 (377)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhh---ccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHHHHHHhcC
Confidence 11222223333333322 3455 45899999999999999999887543 47788877753321000
Q ss_pred ------------------------------------------------------------------hhhhh---c-----
Q 025550 175 ------------------------------------------------------------------LIDQF---T----- 180 (251)
Q Consensus 175 ------------------------------------------------------------------~~~~~---~----- 180 (251)
+...+ .
T Consensus 214 ~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 293 (377)
T 4ezi_A 214 PGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTE 293 (377)
T ss_dssp CCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHH
T ss_pred CCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHH
Confidence 00000 0
Q ss_pred ---------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCC-HHHHHHHHHHHHHhhcC
Q 025550 181 ---------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSIS-NEELRNLESWIKTRMSC 248 (251)
Q Consensus 181 ---------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~-~~~~~~~~~~l~~~l~~ 248 (251)
....++|+++++|++|.++|+++++.+++.+++.|. ++++.+++ .+|... ......+.+||.++++.
T Consensus 294 ~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~~~~~~~~~~~wl~~~~~~ 372 (377)
T 4ezi_A 294 ILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQAHPFVLKEQVDFFKQFERQ 372 (377)
T ss_dssp HHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTTHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccChHHHHHHHHHHHHHHhhcc
Confidence 013789999999999999999999999999999999 99999999 899876 45578999999999875
Q ss_pred CC
Q 025550 249 SS 250 (251)
Q Consensus 249 ~~ 250 (251)
+.
T Consensus 373 ~~ 374 (377)
T 4ezi_A 373 EA 374 (377)
T ss_dssp SC
T ss_pred hh
Confidence 53
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-18 Score=135.33 Aligned_cols=181 Identities=13% Similarity=0.067 Sum_probs=116.4
Q ss_pred eEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCch-------hhhhhhcCC----CcceEEEEccCCCCCCcccCC
Q 025550 18 IIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANE-------PIKTLFTSP----EFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-------~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~ 86 (251)
.....++..|+.+. .+++.|+||++||++++...|. .+++.+.+. ++.++.+|+++...
T Consensus 51 ~~~~~~vy~P~~~~---~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~------- 120 (297)
T 1gkl_A 51 GTKSLNVYLPYGYD---PNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNC------- 120 (297)
T ss_dssp EEEEEEEEECTTCC---TTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTC-------
T ss_pred CEEEEEEEeCCCCC---CCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCcc-------
Confidence 34444444443332 2467899999999987766543 244455444 46666666542100
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC----------CCCCcEEEEEeChhHHHHHHHHHhcC
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG----------IDPNNVFVCGFSQGGALTLASVLLYP 156 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~----------~~~~~i~l~G~S~Gg~~a~~~a~~~p 156 (251)
..... ....++++...++...... .+.++++|+|+||||.+++.++.++|
T Consensus 121 ------------------~~~~~--~~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p 180 (297)
T 1gkl_A 121 ------------------TAQNF--YQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCL 180 (297)
T ss_dssp ------------------CTTTH--HHHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHT
T ss_pred ------------------chHHH--HHHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCc
Confidence 00011 1223455555555421110 25678999999999999999999999
Q ss_pred CCcceEEEeccCCCCcch-------hhhhhccc---CCCCCEEEEccCCCCcccchhcccchHHHHhcC----------C
Q 025550 157 RKLGGGAIFSGWVPFNAS-------LIDQFTSD---AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG----------I 216 (251)
Q Consensus 157 ~~~~~~i~~~~~~~~~~~-------~~~~~~~~---~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~----------~ 216 (251)
+.++++++++|....... +...+... ....++++.+|+.|..+ ..++++.+.|++.| .
T Consensus 181 ~~f~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~~~g~~~~~~~~~~~ 258 (297)
T 1gkl_A 181 DYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAY--ANMNPQIEAMKALPHFDYTSDFSKG 258 (297)
T ss_dssp TTCCEEEEESCCCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEETTCTTH--HHHHHHHHHHHTSTTCCBBSCTTTC
T ss_pred hhhheeeEeccccccCCccchhhhHHHHHHhhccCCcCcEEEEEEeCCCcccc--hhHHHHHHHHHHcCCccccccccCC
Confidence 999999999996543321 11111111 12456677789999764 46778999999988 5
Q ss_pred eeEEEEeCCCCCCC
Q 025550 217 SCEFKAYPGLGHSI 230 (251)
Q Consensus 217 ~~~~~~~~g~~H~~ 230 (251)
++++.+++|++|.+
T Consensus 259 ~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 259 NFYFLVAPGATHWW 272 (297)
T ss_dssp CEEEEEETTCCSSH
T ss_pred ceEEEECCCCCcCH
Confidence 89999999999975
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-19 Score=134.41 Aligned_cols=201 Identities=12% Similarity=0.026 Sum_probs=129.9
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcc---eEEEEccCCCCCCcccCCCCc-CCccccccCCCCCCCCCCChhHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFK---LTKWSFPSAPNNPVTCNYGAV-MPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~g~~-~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.|||+||++++...|..+++.|.+.+.. ++.++....+..... |.+ ...+.+.... .......++..
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~---G~~~~~~~~~~~~~----~~~~~~~~~~~ 75 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFE---GKLTKDAKRPIIKF----GFEQNQATPDD 75 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEE---SCCCTTCSSCEEEE----EESSTTSCHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEE---EEeccCCCCCEEEE----EecCCCCCHHH
Confidence 356899999999999999999988877653 444444333221111 111 0111110000 00112235566
Q ss_pred HHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcchhh------------
Q 025550 115 AVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNASLI------------ 176 (251)
Q Consensus 115 ~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~~~------------ 176 (251)
..+++..++..+. +.++ +++.++||||||.+++.++.++|+ .++++|++++.........
T Consensus 76 ~a~~l~~~i~~l~~~~~~--~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~p~ 153 (254)
T 3ds8_A 76 WSKWLKIAMEDLKSRYGF--TQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPN 153 (254)
T ss_dssp HHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSCSS
T ss_pred HHHHHHHHHHHHHHHhCC--CceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccccccccccCCc
Confidence 6667766666554 4443 689999999999999999999988 7999999998554321110
Q ss_pred -----h----hhcccCCCCCEEEEccC------CCCcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCC---HHHHH
Q 025550 177 -----D----QFTSDAKKTPILWSHGM------ADRTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSIS---NEELR 236 (251)
Q Consensus 177 -----~----~~~~~~~~~p~l~~~g~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~---~~~~~ 236 (251)
. ....-..++|++.++|+ .|.+||.+.++.+...+......++.+.+.| ++|... .+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~Hs~l~~~~~v~~ 233 (254)
T 3ds8_A 154 STPQMDYFIKNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVHQTLHETPKSIE 233 (254)
T ss_dssp CCHHHHHHHHTGGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCGGGGGGSHHHHH
T ss_pred chHHHHHHHHHHhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCchhcccCCHHHHH
Confidence 0 01111247899999999 9999999999888887776544566666666 668754 34567
Q ss_pred HHHHHHHHhhcC
Q 025550 237 NLESWIKTRMSC 248 (251)
Q Consensus 237 ~~~~~l~~~l~~ 248 (251)
.+..||.++...
T Consensus 234 ~i~~fL~~~~~~ 245 (254)
T 3ds8_A 234 KTYWFLEKFKTD 245 (254)
T ss_dssp HHHHHHHTCCCS
T ss_pred HHHHHHHHhcCC
Confidence 788888776543
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=139.86 Aligned_cols=173 Identities=10% Similarity=0.053 Sum_probs=111.8
Q ss_pred CccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEc----cCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 38 ARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSF----PSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..|+|||+||++++... |..+++.| +.||.++.+|+ ||++.+ +..
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S---------------------------~~~ 88 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQ---------------------------DHA 88 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSC---------------------------CHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCc---------------------------ccc
Confidence 45789999999875544 35577777 68999999965 443221 111
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH--hcCCCcceEEEeccCCCCcc----h----------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL--LYPRKLGGGAIFSGWVPFNA----S---------- 174 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~--~~p~~~~~~i~~~~~~~~~~----~---------- 174 (251)
....++.++++.+.. .++.++++|+||||||.+++.+|. .+|++++++|++++...... .
T Consensus 89 ---~~~~d~~~~~~~l~~-~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~~~ 164 (335)
T 2q0x_A 89 ---HDAEDVDDLIGILLR-DHCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPENPLFTPEGCAARKEHV 164 (335)
T ss_dssp ---HHHHHHHHHHHHHHH-HSCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHHHH
T ss_pred ---CcHHHHHHHHHHHHH-HcCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchhcccCHHHHHHHHHHH
Confidence 123333344433322 135578999999999999999998 47899999999887432110 0
Q ss_pred -----------h------------hh-----------------hh---------cccCCCCCEEEEccCCCCcccchh-c
Q 025550 175 -----------L------------ID-----------------QF---------TSDAKKTPILWSHGMADRTVLFEA-G 204 (251)
Q Consensus 175 -----------~------------~~-----------------~~---------~~~~~~~p~l~~~g~~D~~~~~~~-~ 204 (251)
. .. .. ....+++|+|+++|++|.++|.+. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~ 244 (335)
T 2q0x_A 165 EKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEV 244 (335)
T ss_dssp HHHHHHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHH
T ss_pred HHHhhccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhH
Confidence 0 00 00 012478999999999999999763 2
Q ss_pred ccchHHHHhcCCeeE--------E-----EEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 205 QAGPPFLEQAGISCE--------F-----KAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~--------~-----~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
..+.+.+.+.-...+ + ++++|+|| +..+.+.+||.+..
T Consensus 245 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~agH----e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 245 GTVLEGVRDHTGCNRVTVSYFNDTCDELRRVLKAAES----EHVAAILQFLADED 295 (335)
T ss_dssp HHHHHHHHHHSSSSCEEEEECCCEECTTSCEEECCHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccccccccccchhhhhhcccCCCCC----HHHHHHHHHHHhhh
Confidence 223344444322233 5 78999999 55778888887654
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.81 E-value=8e-20 Score=145.16 Aligned_cols=115 Identities=15% Similarity=0.170 Sum_probs=79.7
Q ss_pred CCccEEEEEecCCCCCCCch----------------hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCC
Q 025550 37 MARNFILWLHGLGDSGPANE----------------PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIP 100 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~----------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~ 100 (251)
.+.|+||++||++++...|. .+++.+.+.||.++.+|+|+++.+..... ..+-
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~------ 116 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKD-----RQLS------ 116 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCG-----GGGG------
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccc-----cccc------
Confidence 45689999999998876443 77888888899999999998755321100 0000
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-CCCcceEEEeccC
Q 025550 101 VTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-PRKLGGGAIFSGW 168 (251)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~~~~~~i~~~~~ 168 (251)
.....++.+.++++.++++.+... .+.++++++|||+||.+++.++.++ |++++++|++++.
T Consensus 117 -----~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~ 179 (354)
T 2rau_A 117 -----FTANWGWSTWISDIKEVVSFIKRD-SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGG 179 (354)
T ss_dssp -----GGTTCSHHHHHHHHHHHHHHHHHH-HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCS
T ss_pred -----cccCCcHHHHHHHHHHHHHHHHHh-cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEeccc
Confidence 000123344455566655544311 2457899999999999999999999 9999999999653
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=138.42 Aligned_cols=124 Identities=16% Similarity=0.205 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-hh---hhh----cccCCCCCE
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-LI---DQF----TSDAKKTPI 188 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-~~---~~~----~~~~~~~p~ 188 (251)
+.+...++. +..++.++++|+|||+||.+++.++.++|+.++++++++|....... .. ..+ .......|+
T Consensus 137 ~~l~~~i~~--~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (275)
T 2qm0_A 137 EELKPQIEK--NFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSIWWNNKSVLEKEENLIIELNNAKFETGV 214 (275)
T ss_dssp HTHHHHHHH--HSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCTTHHHHGGGGGTTHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHh--hccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCceeeeChHHHHHHHHHHHhhhcccCCCceE
Confidence 344444443 45667789999999999999999999999999999999997643221 11 111 134467899
Q ss_pred EEEccCCCCcccchhcccchHHH---HhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHH
Q 025550 189 LWSHGMADRTVLFEAGQAGPPFL---EQAGISCEFKAYPGLGHSIS-NEELRNLESWI 242 (251)
Q Consensus 189 l~~~g~~D~~~~~~~~~~~~~~l---~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l 242 (251)
++.+|+.|..++.+.++++.+.| ++.|.++++.+++|.+|+.. ...+.+.++||
T Consensus 215 ~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~~~~~~~~~g~~H~~~~~~~l~~~l~~l 272 (275)
T 2qm0_A 215 FLTVGSLEREHMVVGANELSERLLQVNHDKLKFKFYEAEGENHASVVPTSLSKGLRFI 272 (275)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHHHHCCCTTEEEEEEEETTCCTTTHHHHHHHHHHHHH
T ss_pred EEEeCCcccchhhHHHHHHHHHHHhcccCCceEEEEECCCCCccccHHHHHHHHHHHH
Confidence 99999999988888999999999 56788999999999999754 44566666776
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-18 Score=132.60 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=122.5
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.||++||++++...|..+.+.+. .+|.++.+|+||++.+..+... . .....+....+++
T Consensus 25 g~~~vllHG~~~~~~~w~~~~~~l~-~~~~vi~~Dl~G~G~s~~~~~~----~--------------~~~~~~~~~~~~~ 85 (291)
T 3qyj_A 25 GAPLLLLHGYPQTHVMWHKIAPLLA-NNFTVVATDLRGYGDSSRPASV----P--------------HHINYSKRVMAQD 85 (291)
T ss_dssp SSEEEEECCTTCCGGGGTTTHHHHT-TTSEEEEECCTTSTTSCCCCCC----G--------------GGGGGSHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCC----c--------------cccccCHHHHHHH
Confidence 4679999999999999999988886 5899999999988654211000 0 0011345555666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC-----------------------Cc---
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP-----------------------FN--- 172 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~-----------------------~~--- 172 (251)
+.++++ ..+ .+++.++||||||.+++.+|.++|++++++++++.... ..
T Consensus 86 ~~~~~~---~l~--~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (291)
T 3qyj_A 86 QVEVMS---KLG--YEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTTDQEFATAYYHWFFLIQPDNLP 160 (291)
T ss_dssp HHHHHH---HTT--CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCHHHHHHTCCHHHHHHTTHHHHTTCSTTHH
T ss_pred HHHHHH---HcC--CCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCCCcchhhhcchhhhhHHHHHHHHhccCCCch
Confidence 666666 333 45899999999999999999999999999998863210 00
Q ss_pred ch--------hh-----------h-------------------------hh--------------cccCCCCCEEEEccC
Q 025550 173 AS--------LI-----------D-------------------------QF--------------TSDAKKTPILWSHGM 194 (251)
Q Consensus 173 ~~--------~~-----------~-------------------------~~--------------~~~~~~~p~l~~~g~ 194 (251)
.. +. . .+ ...++++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lvi~G~ 240 (291)
T 3qyj_A 161 ETLIGANPEYYLRKCLEKWGKDFSAFHPQALAEYIRCFSQPAVIHATCEDYRAAATIDLEHDELDMKQKISCPVLVLWGE 240 (291)
T ss_dssp HHHHHTCHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTTHHHHHHHTTTTCCBCSCEEEEEET
T ss_pred HHHHcCCHHHHHHHHHHhcCCCcccCCHHHHHHHHHHhcCCCcchhHHHHHHcccccchhhcchhcCCccccceEEEecc
Confidence 00 00 0 00 012478999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+|...+.. ...+.+++....++..+++ +||++..|..+++.+.|.++|.
T Consensus 241 ~D~~~~~~---~~~~~~~~~~~~~~~~~~~-~GH~~~~E~P~~v~~~i~~fL~ 289 (291)
T 3qyj_A 241 KGIIGRKY---DVLATWRERAIDVSGQSLP-CGHFLPEEAPEETYQAIYNFLT 289 (291)
T ss_dssp TSSHHHHS---CHHHHHHTTBSSEEEEEES-SSSCHHHHSHHHHHHHHHHHHH
T ss_pred cccccchh---hHHHHHHhhcCCcceeecc-CCCCchhhCHHHHHHHHHHHHh
Confidence 99754321 1223333333456777787 6999988888888888877764
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=130.97 Aligned_cols=203 Identities=11% Similarity=0.084 Sum_probs=132.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCC---cceEEEEccCCCCCCcccCCC-CcCCccccccCCCCCCCCCCChhHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPE---FKLTKWSFPSAPNNPVTCNYG-AVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~g-~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.|||+||++++...|..+++.|.+.+ +.++.+|++..+......... .+...+...... .......++.+
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~----~n~~~~~~~~~ 79 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFA----NNRDGKANIDK 79 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEES----CCCCSHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEec----cCCCcccCHHH
Confidence 3568999999999999999999998766 788888888665421111000 000111000000 00011226777
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcch-------hhhhh---
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNAS-------LIDQF--- 179 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~-------~~~~~--- 179 (251)
.++++..+++.+. ...+.+++.++||||||.++..++.++ ++.++++|.+++....... ....+
T Consensus 80 ~a~~l~~~~~~l~-~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~~~~~~~~~~l~~~ 158 (250)
T 3lp5_A 80 QAVWLNTAFKALV-KTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTSTTAKTSMFKELYRY 158 (250)
T ss_dssp HHHHHHHHHHHHH-TTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCSSCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHH-HHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccccccCHHHHHHHhc
Confidence 7888888888765 233457999999999999999999877 5679999999875543221 11111
Q ss_pred -cccCCCCCEEEEccC----CCCcccchhcccchHHHHhcCCeeEEEEeC--CCCCCCCHHHHHHHHHHHHHhhc
Q 025550 180 -TSDAKKTPILWSHGM----ADRTVLFEAGQAGPPFLEQAGISCEFKAYP--GLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 180 -~~~~~~~p~l~~~g~----~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~--g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..-...+|+++++|+ .|.++|.+.++.+...+.......+.+.+. +++|....+.. .+.+-+.++|.
T Consensus 159 ~~~lp~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~ 232 (250)
T 3lp5_A 159 RTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAHSDLPQNK-QIVSLIRQYLL 232 (250)
T ss_dssp GGGSCTTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTS
T ss_pred cccCCCCceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCchhcchhCH-HHHHHHHHHHh
Confidence 111247999999999 999999998887777776543444445555 46698876554 56666666665
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.80 E-value=7.6e-19 Score=137.57 Aligned_cols=105 Identities=19% Similarity=0.290 Sum_probs=78.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
..|.|||+||++.+...|..+++.|.+ .+|.++++|+||++.+... .....++.+.+
T Consensus 37 ~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~----------------------~~~~~~~~~~a 94 (316)
T 3c5v_A 37 EGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVK----------------------NPEDLSAETMA 94 (316)
T ss_dssp SSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCS----------------------CTTCCCHHHHH
T ss_pred CCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCC----------------------CccccCHHHHH
Confidence 347899999999999999999998875 3899999999988664211 11123456667
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEecc
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSG 167 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~ 167 (251)
+++.++++.+. .++ .+++.|+||||||.+++.+|.+ +|+ ++++|++++
T Consensus 95 ~dl~~~l~~l~-~~~-~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 95 KDVGNVVEAMY-GDL-PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp HHHHHHHHHHH-TTC-CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred HHHHHHHHHHh-ccC-CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 77777777542 122 2689999999999999999986 576 999988764
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.7e-19 Score=134.16 Aligned_cols=178 Identities=14% Similarity=0.143 Sum_probs=123.8
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...+.||++||++++...|..+++ + ..++.++.+|+|+.... .....++.+.+
T Consensus 19 ~~~~~lv~lhg~~~~~~~~~~~~~-l-~~~~~v~~~d~~G~~~~-------------------------~~~~~~~~~~~ 71 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFSYASLPR-L-KSDTAVVGLNCPYARDP-------------------------ENMNCTHGAMI 71 (265)
T ss_dssp TSSEEEEEECCTTCCGGGGTTSCC-C-SSSEEEEEEECTTTTCG-------------------------GGCCCCHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHh-c-CCCCEEEEEECCCCCCC-------------------------CCCCCCHHHHH
Confidence 456789999999999999999988 6 57899999999974211 01123455556
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH---hcCCCcceEEEeccCCCCcchh------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL---LYPRKLGGGAIFSGWVPFNASL------------------ 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~---~~p~~~~~~i~~~~~~~~~~~~------------------ 175 (251)
+.+.+.++.+ . ..+++.|+|||+||.+++.+|. ..++.+++++++++..+.....
T Consensus 72 ~~~~~~i~~~---~-~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (265)
T 3ils_A 72 ESFCNEIRRR---Q-PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQ 147 (265)
T ss_dssp HHHHHHHHHH---C-SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTS
T ss_pred HHHHHHHHHh---C-CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCC
Confidence 6666666632 2 2358999999999999999998 6777899999887644321100
Q ss_pred -----------h--------------hhh---cccCCCCCEE-EEccCC---CCccc--------------chhcccchH
Q 025550 176 -----------I--------------DQF---TSDAKKTPIL-WSHGMA---DRTVL--------------FEAGQAGPP 209 (251)
Q Consensus 176 -----------~--------------~~~---~~~~~~~p~l-~~~g~~---D~~~~--------------~~~~~~~~~ 209 (251)
. ..+ .....++|++ +++|++ |..++ ......+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~ 227 (265)
T 3ils_A 148 PGASPDGSTEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDT 227 (265)
T ss_dssp SSSCSSSCSCCCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHH
Confidence 0 000 0123788988 999999 98874 222222222
Q ss_pred HHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHHhhc
Q 025550 210 FLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 210 ~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 247 (251)
.+. +.++++++++|+||++. .+..+.+.+.|.++|.
T Consensus 228 ~~~--~~~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL~ 265 (265)
T 3ils_A 228 IMP--GASFDIVRADGANHFTLMQKEHVSIISDLIDRVMA 265 (265)
T ss_dssp HST--TCCEEEEEEEEEETTGGGSTTTTHHHHHHHHHHTC
T ss_pred hCC--ccceeEEEcCCCCcceeeChhhHHHHHHHHHHHhC
Confidence 221 13689999999999988 7888889998888763
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.2e-21 Score=148.71 Aligned_cols=107 Identities=12% Similarity=0.123 Sum_probs=80.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+.|+||++||++++...|..+++.|. .||.++.+|+|+++.+...... ......+..+.++
T Consensus 24 ~~p~vv~lHG~~~~~~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~------------------~~~~~~~~~~~~~ 84 (304)
T 3b12_A 24 SGPALLLLHGFPQNLHMWARVAPLLA-NEYTVVCADLRGYGGSSKPVGA------------------PDHANYSFRAMAS 84 (304)
Confidence 45789999999999999999999887 8999999999987654211000 0012234444556
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
++.++++.+ +.++++|+|||+||.+++.+|.++|++++++|++++.
T Consensus 85 ~l~~~l~~l-----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (304)
T 3b12_A 85 DQRELMRTL-----GFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDII 130 (304)
Confidence 666666532 3458999999999999999999999999999988864
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.9e-18 Score=135.18 Aligned_cols=122 Identities=13% Similarity=0.016 Sum_probs=90.7
Q ss_pred EeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCC---------CcceEEEEccCCCCCCc
Q 025550 12 VILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSP---------EFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~ 82 (251)
.+..++..++..... +.....+.|||+||++++...|..++..|.+. +|.++++|+||++.+..
T Consensus 72 ~~~i~g~~i~~~~~~-------~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~ 144 (388)
T 4i19_A 72 TTEIDGATIHFLHVR-------SPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGP 144 (388)
T ss_dssp EEEETTEEEEEEEEC-------CSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCC
T ss_pred EEEECCeEEEEEEcc-------CCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 344567776654443 22345678999999999999999999988865 99999999998754321
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceE
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGG 162 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~ 162 (251)
. .....+..+.++.+.++++ .. +.++++++|||+||.++..+|.++|+.++++
T Consensus 145 ~----------------------~~~~~~~~~~a~~~~~l~~---~l--g~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~l 197 (388)
T 4i19_A 145 L----------------------KSAGWELGRIAMAWSKLMA---SL--GYERYIAQGGDIGAFTSLLLGAIDPSHLAGI 197 (388)
T ss_dssp C----------------------SSCCCCHHHHHHHHHHHHH---HT--TCSSEEEEESTHHHHHHHHHHHHCGGGEEEE
T ss_pred C----------------------CCCCCCHHHHHHHHHHHHH---Hc--CCCcEEEEeccHHHHHHHHHHHhChhhceEE
Confidence 1 1112345555666666666 33 3468999999999999999999999999999
Q ss_pred EEecc
Q 025550 163 AIFSG 167 (251)
Q Consensus 163 i~~~~ 167 (251)
+++++
T Consensus 198 vl~~~ 202 (388)
T 4i19_A 198 HVNLL 202 (388)
T ss_dssp EESSC
T ss_pred EEecC
Confidence 99885
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-19 Score=143.01 Aligned_cols=191 Identities=18% Similarity=0.149 Sum_probs=126.7
Q ss_pred CCCccEEEEEecCCCC-CCCchhhhhhhcCCCcc----eEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDS-GPANEPIKTLFTSPEFK----LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~-~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
.++.|+|+++||.+.. ...+..+.+.+.+.|+. ++.+|+++... + . ... . ...
T Consensus 194 ~~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~-----------r--~--~~~------~-~~~ 251 (403)
T 3c8d_A 194 AEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTH-----------R--A--HEL------P-CNA 251 (403)
T ss_dssp -CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHH-----------H--H--HHS------S-SCH
T ss_pred CCCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCcc-----------c--c--ccC------C-ChH
Confidence 4678999999996531 22333455666666764 66666653100 0 0 000 0 011
Q ss_pred HHHHH-HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc-------hhhhhhcc-
Q 025550 111 SLLKA-VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA-------SLIDQFTS- 181 (251)
Q Consensus 111 ~~~~~-~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~-------~~~~~~~~- 181 (251)
.+.+. ++++...+++......|.++++|+|+||||.+++.++.++|+.++++++++|...... .+...+..
T Consensus 252 ~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~~~~~~~~~~~~~~~ 331 (403)
T 3c8d_A 252 DFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAG 331 (403)
T ss_dssp HHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTTSSSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCCCCcHHHHHHHHHhc
Confidence 22222 3445555553212234678999999999999999999999999999999999764221 12222221
Q ss_pred --cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHHhhcCCC
Q 025550 182 --DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKTRMSCSS 250 (251)
Q Consensus 182 --~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~~~~ 250 (251)
.....|+++.+|+.|..+ .+.++.+.+.|++.|.++++++++| +|.+. .+.+.+++.||.+.+...+
T Consensus 332 ~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~~~~w~~~l~~~l~~l~~~~~~~~ 402 (403)
T 3c8d_A 332 EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDALCWRGGLMQGLIDLWQPLFHDR 402 (403)
T ss_dssp SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHHHHHHHHHHHHHHHHGGGTC--
T ss_pred cccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCCHHHHHHHHHHHHHHHhcccccCC
Confidence 346788999999988654 5778899999999999999999999 79864 4567888999988776543
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=134.98 Aligned_cols=177 Identities=12% Similarity=0.088 Sum_probs=116.8
Q ss_pred CCCCccEEEEEecCCCCC--CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLGDSG--PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.....|.||++||++++. ..|..++..+. .++.++.+|+|+.+.+. ....++
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~-------------------------~~~~~~ 116 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEGE-------------------------PLPSSM 116 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTSSTTC-------------------------CBCSSH
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCCCCCC-------------------------CCCCCH
Confidence 344568999999999977 88999888886 46999999999765421 011234
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCCCCcchhh-------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWVPFNASLI------------- 176 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~~~~~~~~------------- 176 (251)
.+.++.+.+.+.. . .+.++++|+|||+||.+++.++.++| +.++++|++++..+......
T Consensus 117 ~~~a~~~~~~l~~--~--~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (300)
T 1kez_A 117 AAVAAVQADAVIR--T--QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFD 192 (300)
T ss_dssp HHHHHHHHHHHHH--H--CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHH--h--cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHh
Confidence 4445554433321 2 24568999999999999999999988 47999999988655432000
Q ss_pred ---------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-HH
Q 025550 177 ---------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-EE 234 (251)
Q Consensus 177 ---------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~ 234 (251)
..+....+++|+++++|+ |..++... ..+.+.+ ....++++++| +|.... +.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~---~~~~~~~~i~g-gH~~~~~e~ 266 (300)
T 1kez_A 193 RETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTW---PFEHDTVAVPG-DHFTMVQEH 266 (300)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCC---SSCCEEEEESS-CTTTSSSSC
T ss_pred CcCCccchHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhc---CCCCeEEEecC-CChhhcccc
Confidence 011224578999999995 55666544 2332222 22468999999 998763 44
Q ss_pred HHHHHHHHHHhhc
Q 025550 235 LRNLESWIKTRMS 247 (251)
Q Consensus 235 ~~~~~~~l~~~l~ 247 (251)
.+.+.+.+.++|.
T Consensus 267 ~~~~~~~i~~fl~ 279 (300)
T 1kez_A 267 ADAIARHIDAWLG 279 (300)
T ss_dssp SHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-18 Score=126.95 Aligned_cols=197 Identities=14% Similarity=0.082 Sum_probs=126.4
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCc--ceEEEEccCCCCCCcccCCC-CcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEF--KLTKWSFPSAPNNPVTCNYG-AVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~g-~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.+.|||+||++++...|..+++.|.+.|+ .++.+|++..+......... .+.......... .....++.+.
T Consensus 6 ~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~------~n~~~~~~~~ 79 (249)
T 3fle_A 6 TTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFK------DNKNGNFKEN 79 (249)
T ss_dssp CEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEES------STTCCCHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcC------CCCCccHHHH
Confidence 46799999999999999999999999986 57888888665421110000 000000000000 0011234444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-----CcceEEEeccCCCCcch----------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-----KLGGGAIFSGWVPFNAS---------------- 174 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~i~~~~~~~~~~~---------------- 174 (251)
.+++.++++.+. ...+.+++.++||||||.+++.++.++|+ +++.+|.+++.......
T Consensus 80 ~~~l~~~i~~l~-~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p 158 (249)
T 3fle_A 80 AYWIKEVLSQLK-SQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKP 158 (249)
T ss_dssp HHHHHHHHHHHH-HTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCB
T ss_pred HHHHHHHHHHHH-HHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCC
Confidence 566666666553 12345689999999999999999999874 68999999874432110
Q ss_pred -----hhhhhcc-----cCCCCCEEEEccC------CCCcccchhcccchHHHHhcCCeeEEEEeCC--CCCCCCHH---
Q 025550 175 -----LIDQFTS-----DAKKTPILWSHGM------ADRTVLFEAGQAGPPFLEQAGISCEFKAYPG--LGHSISNE--- 233 (251)
Q Consensus 175 -----~~~~~~~-----~~~~~p~l~~~g~------~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g--~~H~~~~~--- 233 (251)
....+.. ...++|++.++|+ .|..|+...++.+...++.....++.+.++| +.|....+
T Consensus 159 ~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a~Hs~l~~n~~ 238 (249)
T 3fle_A 159 SRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKAQHSQLHENKD 238 (249)
T ss_dssp SSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGGSTGGGGGCHH
T ss_pred cccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCCchhccccCHH
Confidence 0001100 1257899999998 7999999998888777777666677777766 78976533
Q ss_pred HHHHHHHHH
Q 025550 234 ELRNLESWI 242 (251)
Q Consensus 234 ~~~~~~~~l 242 (251)
..+.+.+||
T Consensus 239 V~~~I~~FL 247 (249)
T 3fle_A 239 VANEIIQFL 247 (249)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 344555554
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.9e-18 Score=137.09 Aligned_cols=189 Identities=16% Similarity=0.221 Sum_probs=119.0
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC-----------chhhhhhhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 19 IFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA-----------NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
.+..+++.|... +...+.|+|+++||++++... |..++..+.++||.++.+|+|+++.+...
T Consensus 62 ~~~g~l~~P~~~---~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~---- 134 (397)
T 3h2g_A 62 TASGVLLIPGGE---RCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYA---- 134 (397)
T ss_dssp EEEEEEEEEECT---TCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCS----
T ss_pred EEEEEEEeCCCC---CCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCC----
Confidence 455555543221 234578999999999987665 66788889899999999999987653110
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCC-CCCcEEEEEeChhHHHHHHHHHh-cC----C-Ccc
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASVLL-YP----R-KLG 160 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~-~p----~-~~~ 160 (251)
...+.. ......++.+.+..+..+++ +.++ +.++++|+|||+||.+++.++.. .+ + .+.
T Consensus 135 --~~~~~~---------~~~~~~~~~d~~~~~~~~~~---~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~ 200 (397)
T 3h2g_A 135 --YHPYLH---------SASEASATIDAMRAARSVLQ---HLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLV 200 (397)
T ss_dssp --SCCTTC---------HHHHHHHHHHHHHHHHHHHH---HHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEE
T ss_pred --ccchhh---------hhhHHHHHHHHHHHHHHHHH---hcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceE
Confidence 000000 00011334444444444444 4455 35799999999999999887632 22 1 356
Q ss_pred eEEEeccCCCCcch----------------------------------h---------------h---------------
Q 025550 161 GGAIFSGWVPFNAS----------------------------------L---------------I--------------- 176 (251)
Q Consensus 161 ~~i~~~~~~~~~~~----------------------------------~---------------~--------------- 176 (251)
+++..++....... . .
T Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (397)
T 3h2g_A 201 ASAPISGPYALEQTFLDSWSGSNAVGENTFGILLGSYAIVAMQHTYKNIYLEPGQVFQDPWAAKVEPLFPGKQSLTDMFL 280 (397)
T ss_dssp EEEEESCCSSHHHHHHHHTTSBCSSSBCTTHHHHHHHHHHHHHHHHCCSCSSGGGTBCTTHHHHSGGGTTBSSCHHHHHH
T ss_pred EEecccccccHHHHHHhhccccccccccchhhhHHHHHHHHHHHhCchhhcCHHHHhchhHHHHHHHhcCCCccchhhhc
Confidence 66665442221100 0 0
Q ss_pred -------------------h------------hhc-----ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe-eE
Q 025550 177 -------------------D------------QFT-----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS-CE 219 (251)
Q Consensus 177 -------------------~------------~~~-----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~-~~ 219 (251)
. .+. ....++|+++++|++|.++|++.++.+.+.+++.|.+ ++
T Consensus 281 ~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~P~li~~g~~D~~vp~~~~~~~~~~~~~~g~~~v~ 360 (397)
T 3h2g_A 281 NDTLPSIDKVKSYFQPGFYSDFPSNPANPFRQDLARNNLLEWAPQTPTLLCGSSNDATVPLKNAQTAIASFQQRGSNQVA 360 (397)
T ss_dssp TTSSCCGGGHHHHBCHHHHHHHHHCTTCHHHHHHHHTCCCSSCCCSCEEEEECTTBSSSCTHHHHHHHHHHHHTTCCCEE
T ss_pred cccCCCccchHhhcCHHHHHhhhhCCccHHHHHHHhcchhccCCCCCEEEEEECCCCccCHHHHHHHHHHHHhcCCCceE
Confidence 0 000 0013789999999999999999999999999999888 77
Q ss_pred EEEeCCCCCC
Q 025550 220 FKAYPGLGHS 229 (251)
Q Consensus 220 ~~~~~g~~H~ 229 (251)
+....+ ||.
T Consensus 361 l~~~~~-g~~ 369 (397)
T 3h2g_A 361 LVDTGT-GNA 369 (397)
T ss_dssp EEECSC-SCG
T ss_pred EEEcCC-CCC
Confidence 776653 443
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-17 Score=129.61 Aligned_cols=175 Identities=12% Similarity=0.123 Sum_probs=120.5
Q ss_pred CCccEEEEEecC--CCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 37 MARNFILWLHGL--GDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 37 ~~~~~vv~~HG~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
...|.||++||+ +++...|..+++.| ..++.++.+|+|+.+.. .....++..
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~G~~-------------------------~~~~~~~~~ 132 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGFHGG-------------------------QALPATLTV 132 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTSSTT-------------------------CCEESSHHH
T ss_pred CCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCCCCC-------------------------CCCCCCHHH
Confidence 456889999995 66778899999988 68999999999977532 111224455
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcc--hhh-------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNA--SLI------------- 176 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~--~~~------------- 176 (251)
.++.+.+.+.... +.++++|+|||+||.+++.+|.++ |+.+++++++++..+... ...
T Consensus 133 ~~~~~~~~l~~~~----~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (319)
T 3lcr_A 133 LVRSLADVVQAEV----ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVE 208 (319)
T ss_dssp HHHHHHHHHHHHH----TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhh
Confidence 5556666555432 346899999999999999999887 888999999987665433 100
Q ss_pred ----h--------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH
Q 025550 177 ----D--------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN 232 (251)
Q Consensus 177 ----~--------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~ 232 (251)
. .+....+++|+++++|++| .++......+.+.+.. ..+++.+++ +|....
T Consensus 209 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~~-~~~~~~~~~~~~~~~~---~~~~~~~~g-~H~~~~ 283 (319)
T 3lcr_A 209 YLRLTGGGNLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQP-LVEQEKPEWRGDVLAA---MGQVVEAPG-DHFTII 283 (319)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESSC-SSSCCCTHHHHHHHHT---CSEEEEESS-CTTGGG
T ss_pred hhcccCCCchhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCCC-CCCcccchhhhhcCCC---CceEEEeCC-CcHHhh
Confidence 0 0112357899999999884 5565655555555543 468888887 776543
Q ss_pred H--H----HHHHHHHHHHhh
Q 025550 233 E--E----LRNLESWIKTRM 246 (251)
Q Consensus 233 ~--~----~~~~~~~l~~~l 246 (251)
+ . .+.+.+||.+..
T Consensus 284 ~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 284 EGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp STTTHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcc
Confidence 2 3 455666666554
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.75 E-value=7e-18 Score=135.84 Aligned_cols=168 Identities=15% Similarity=0.154 Sum_probs=102.8
Q ss_pred CCCccEEEEEecCCCCCC--------------Cch----hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcccccc
Q 025550 36 PMARNFILWLHGLGDSGP--------------ANE----PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~--------------~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~ 97 (251)
.++.|+||++||.+++.. .|. .+++.|+++||.++.+|+++.+.+....... ..|
T Consensus 111 ~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~~~~~---~~~---- 183 (391)
T 3g8y_A 111 KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYD---KGW---- 183 (391)
T ss_dssp CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSSGGGT---TTT----
T ss_pred CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCccccc---ccc----
Confidence 467899999999887643 123 5778899999999999999876542111000 000
Q ss_pred CCCCCCCCCCChhHH------------HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE
Q 025550 98 EIPVTASSPKDESSL------------LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI 164 (251)
Q Consensus 98 ~~~~~~~~~~~~~~~------------~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~ 164 (251)
..+...+ ...+.++...++.+. +..+|.++|+|+|||+||.+++.++...+ +++++|+
T Consensus 184 --------~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~~~-~i~a~v~ 254 (391)
T 3g8y_A 184 --------NYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLDK-DIYAFVY 254 (391)
T ss_dssp --------SCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHHCT-TCCEEEE
T ss_pred --------cchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHcCC-ceeEEEE
Confidence 0111111 112244445555544 44567889999999999999998887765 6888887
Q ss_pred eccCCCCcch---------------------hh---------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 165 FSGWVPFNAS---------------------LI---------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 165 ~~~~~~~~~~---------------------~~---------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.++....... .. ..........|+|+++|+.|.++ + .+.+.++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~d~~~~~~~~ap~P~LiihG~~D~~v--~---~~~~~~~~~ 329 (391)
T 3g8y_A 255 NDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLDRDF--R---LVQSAYAAS 329 (391)
T ss_dssp ESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTGGGTCCHHHHHHTTTTSCEEECSCBCHHHH--H---HHHHHHHHT
T ss_pred ccCCCCcccchhhcccccccccccccccHHHhCccHHhhCCHHHHHHhhcCCCEEEEcCCccHHH--H---HHHHHHHHc
Confidence 7653332110 00 00001123579999999999987 2 344555555
Q ss_pred CCe--eEEEEeC
Q 025550 215 GIS--CEFKAYP 224 (251)
Q Consensus 215 ~~~--~~~~~~~ 224 (251)
+.+ +++..++
T Consensus 330 g~~~~~~~~~~~ 341 (391)
T 3g8y_A 330 GKPENAEFHHYP 341 (391)
T ss_dssp TCGGGEEECCCG
T ss_pred CCCceeEEEEeC
Confidence 543 5554444
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.9e-17 Score=141.11 Aligned_cols=165 Identities=15% Similarity=0.066 Sum_probs=113.8
Q ss_pred hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHH----------
Q 025550 59 KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVA---------- 128 (251)
Q Consensus 59 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~---------- 128 (251)
.+.|+++||.++.+|+||.+.+... + . .... ..++++.++++.+..
T Consensus 274 ~~~la~~GYaVv~~D~RG~G~S~G~---------~-~----------~~~~----~e~~D~~a~IdwL~~~~~~~~d~~~ 329 (763)
T 1lns_A 274 NDYFLTRGFASIYVAGVGTRSSDGF---------Q-T----------SGDY----QQIYSMTAVIDWLNGRARAYTSRKK 329 (763)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSCSC---------C-C----------TTSH----HHHHHHHHHHHHHTTSSCEESSTTC
T ss_pred HHHHHHCCCEEEEECCCcCCCCCCc---------C-C----------CCCH----HHHHHHHHHHHHHhhcccccccccc
Confidence 4678899999999999988654211 0 0 0011 123444444444321
Q ss_pred -----cCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc------------hhh---------------
Q 025550 129 -----AGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA------------SLI--------------- 176 (251)
Q Consensus 129 -----~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~------------~~~--------------- 176 (251)
...+.++|+++|+|+||.+++.+|..+|+.++++|..++..+... ...
T Consensus 330 ~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~ 409 (763)
T 1lns_A 330 THEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRN 409 (763)
T ss_dssp CCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGG
T ss_pred cccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhh
Confidence 123346999999999999999999999989999999887531000 000
Q ss_pred -----------------hh----------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 177 -----------------DQ----------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 177 -----------------~~----------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
.. ....++++|+|+++|..|..++++.+..+++.+++ +.+
T Consensus 410 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~~ 488 (763)
T 1lns_A 410 LDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GHA 488 (763)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TCC
T ss_pred cCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-CCC
Confidence 00 01124789999999999999999999889998887 666
Q ss_pred eEEEEeCCCCCCCCH-----HHHHHHHHHHHHhhcCC
Q 025550 218 CEFKAYPGLGHSISN-----EELRNLESWIKTRMSCS 249 (251)
Q Consensus 218 ~~~~~~~g~~H~~~~-----~~~~~~~~~l~~~l~~~ 249 (251)
.++++.+ ++|.... +..+.+.+||.++|+..
T Consensus 489 ~~l~i~~-~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 489 KHAFLHR-GAHIYMNSWQSIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp EEEEEES-CSSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred eEEEEeC-CcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 6666554 5998532 34688999999999754
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.73 E-value=5.1e-17 Score=137.76 Aligned_cols=215 Identities=11% Similarity=0.028 Sum_probs=136.6
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC-------CCchh-hh---hhhcCCCcceEEEEccCCCCCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG-------PANEP-IK---TLFTSPEFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~-------~~~~~-~~---~~~~~~g~~~~~~~~~~~~~~~~ 82 (251)
..++..+..++..|. ..++.|+||++||++... ..|.. ++ +.|+++||.++.+|+++++.+..
T Consensus 32 ~~DG~~L~~~~~~P~------~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 32 MRDGVKLHTVIVLPK------GAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp CTTSCEEEEEEEEET------TCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred CCCCCEEEEEEEeCC------CCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 346667766655421 125679999999988642 12222 33 67888999999999998865421
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceE
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGG 162 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~ 162 (251)
..... ... ...+ .........|+.+.++++.. +......+|+++|+|+||.+++.++...|+.++++
T Consensus 106 ~~~~~---~~~--~~~~--~~~g~~~~~D~~~~i~~l~~------~~~~~~~rv~l~G~S~GG~~al~~a~~~~~~l~a~ 172 (615)
T 1mpx_A 106 DYVMT---RPL--RGPL--NPSEVDHATDAWDTIDWLVK------NVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVA 172 (615)
T ss_dssp CCCTT---CCC--SBTT--BCSSCCHHHHHHHHHHHHHH------HCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEE
T ss_pred ccccc---ccc--cccc--ccccccHHHHHHHHHHHHHh------cCCCCCCeEEEEecCHHHHHHHHHhhcCCCceEEE
Confidence 11000 000 0000 00000223344333333332 31222359999999999999999998888899999
Q ss_pred EEeccCCCCcc-h--------------h-------------------------h---------hhh--------------
Q 025550 163 AIFSGWVPFNA-S--------------L-------------------------I---------DQF-------------- 179 (251)
Q Consensus 163 i~~~~~~~~~~-~--------------~-------------------------~---------~~~-------------- 179 (251)
|.+++..+... . . . +.+
T Consensus 173 v~~~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 252 (615)
T 1mpx_A 173 VPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEH 252 (615)
T ss_dssp EEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHT
T ss_pred EecCCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhC
Confidence 99988665211 0 0 0 000
Q ss_pred ----------c----ccC--CCCCEEEEccCCCCcccchhcccchHHHHhcCCe---eEEEEeCCCCCCCCH--------
Q 025550 180 ----------T----SDA--KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS---CEFKAYPGLGHSISN-------- 232 (251)
Q Consensus 180 ----------~----~~~--~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~~~~g~~H~~~~-------- 232 (251)
+ ..+ +++|+|+++|..|.. +...+.++++.|++.|.+ .++++.|+ +|....
T Consensus 253 ~~~d~~w~~~Sp~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~ 330 (615)
T 1mpx_A 253 AAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGA 330 (615)
T ss_dssp CSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETT
T ss_pred CCcChhhhhcChhhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCc
Confidence 0 135 899999999999997 777788899999988643 88999998 796521
Q ss_pred ---------HH-HHHHHHHHHHhhcCC
Q 025550 233 ---------EE-LRNLESWIKTRMSCS 249 (251)
Q Consensus 233 ---------~~-~~~~~~~l~~~l~~~ 249 (251)
.. .+.+.+||.++|+..
T Consensus 331 ~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 331 LNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp EECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccCcccchhhhhhHHHHHHHHHhcCC
Confidence 01 466799999999753
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.7e-17 Score=126.39 Aligned_cols=117 Identities=20% Similarity=0.182 Sum_probs=85.9
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-hhh---hhcc-cCCCCCEEEEccCCCCcc---
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-LID---QFTS-DAKKTPILWSHGMADRTV--- 199 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-~~~---~~~~-~~~~~p~l~~~g~~D~~~--- 199 (251)
+..++.++++|+||||||.+++.++.+ |+.++++++++|....... +.. .+.. .....|+++.+|+.|...
T Consensus 135 ~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~ 213 (278)
T 2gzs_A 135 GLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRE 213 (278)
T ss_dssp TSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGSTTHHHHHHHHHTSCTTTTTTCEEEEEECCC-------
T ss_pred hccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcchhcCcchHHHHHHHhhccCCCCCcEEEEecCcccccccc
Confidence 345677789999999999999999999 9999999999987654321 111 1111 124568999999999764
Q ss_pred -----cchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHh
Q 025550 200 -----LFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTR 245 (251)
Q Consensus 200 -----~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~ 245 (251)
+.+.++.+.+.|++.|+++++.+++|.+|... .....+.++||.+.
T Consensus 214 ~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~g~~H~~~~~~~~~~~l~fl~~~ 265 (278)
T 2gzs_A 214 THAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFNASFRQALLDISGE 265 (278)
T ss_dssp ----CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHHHHHHHHTTC
T ss_pred chhhhhHHHHHHHHHHHHcCCCeeEEEEcCCCCccchhHHHHHHHHHHHhhC
Confidence 36788899999999999999999999899743 34445566676554
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.7e-17 Score=131.25 Aligned_cols=178 Identities=15% Similarity=0.089 Sum_probs=100.1
Q ss_pred CCCccEEEEEecCCCCCC--------------Cch----hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcc-ccc
Q 025550 36 PMARNFILWLHGLGDSGP--------------ANE----PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSW-FDI 96 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~--------------~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w-~~~ 96 (251)
..+.|+||++||.+++.. .|. .+++.|+++||.++.+|+++.+.+....... ..+ +..
T Consensus 116 ~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~---~~~~~~~ 192 (398)
T 3nuz_A 116 NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERYT---LGSNYDY 192 (398)
T ss_dssp CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCSSGGGT---TTTSCCH
T ss_pred CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCccccccccc---cccccch
Confidence 467899999999887543 222 5778899999999999999876542211000 000 000
Q ss_pred cCCCCCCCC-CCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch
Q 025550 97 HEIPVTASS-PKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 97 ~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~ 174 (251)
... .... ..........+.++...++.+. +..+|.++|+|+|||+||.+++.++...+ +++++++.++.......
T Consensus 193 ~~~--~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~~-~i~a~v~~~~~~~~~~~ 269 (398)
T 3nuz_A 193 DVV--SRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDT-SIYAFVYNDFLCQTQER 269 (398)
T ss_dssp HHH--HHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHCT-TCCEEEEESCBCCHHHH
T ss_pred hhh--hhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcCC-cEEEEEEecccccchhh
Confidence 000 0000 0000111112334444455443 34567889999999999999998887766 68888875443221110
Q ss_pred ---------------------h----h-----hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCC--eeEEEE
Q 025550 175 ---------------------L----I-----DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI--SCEFKA 222 (251)
Q Consensus 175 ---------------------~----~-----~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~--~~~~~~ 222 (251)
. . ..+.......|+|+++|+.|..+ +. +.+.++..+. ++++..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ap~PlLii~G~~D~~v--~~---~~~~y~~~g~~~~~~~~~ 344 (398)
T 3nuz_A 270 AEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDRDL--DL---VRKAYAIVGTPDNVKIYH 344 (398)
T ss_dssp HHHCCCCCTTSCCCCSSCGGGCCTTHHHHCCHHHHHHHTTTSCEEECSCBCHHHH--HH---HHHHHHHHTCTTSEEECC
T ss_pred hhhhccccccccccCCccHHHhcchHhhhCCHHHHHHhhCCCcEEEeeCCchHHH--HH---HHHHHHHcCCCcceEEEE
Confidence 0 0 00001124579999999999654 33 3444444443 466666
Q ss_pred eC
Q 025550 223 YP 224 (251)
Q Consensus 223 ~~ 224 (251)
|+
T Consensus 345 ~p 346 (398)
T 3nuz_A 345 YK 346 (398)
T ss_dssp CG
T ss_pred eC
Confidence 55
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-17 Score=133.66 Aligned_cols=161 Identities=12% Similarity=0.097 Sum_probs=113.5
Q ss_pred CCCccEEEEEecCCCCC-CCchh-hhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEP-IKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|+||++||++++. ..|.. +++.+.+ .++.++.+|+|+++.+. + .......
T Consensus 67 ~~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~-----------~------------~~~~~~~ 123 (432)
T 1gpl_A 67 NLNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQ-----------Y------------SQASQNI 123 (432)
T ss_dssp CTTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSC-----------H------------HHHHHHH
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCcc-----------c------------hhhHhhH
Confidence 35678999999999988 57877 7777765 79999999999654321 0 1112334
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh--hhhcccCCCCCEE
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI--DQFTSDAKKTPIL 189 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~p~l 189 (251)
....+++.++++.+. +.+++.+++.|+|||+||.+++.++.++|+++++++++++..+...... ..+. .....++.
T Consensus 124 ~~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~p~~~~~~~~~~l~-~~da~~V~ 202 (432)
T 1gpl_A 124 RVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEPYFQDTPEEVRLD-PSDAKFVD 202 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBCTTTTTCCTTTSCC-GGGSSEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEeccccccccCCChhhccC-cCCCceEE
Confidence 455566666666654 4566778999999999999999999999999999999988766433211 1111 12346899
Q ss_pred EEccCCCCcccc---hhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 190 WSHGMADRTVLF---EAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 190 ~~~g~~D~~~~~---~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
++|++.|.++|. ...+.+ .++..||++||..
T Consensus 203 vIHt~~d~lVP~~~~g~~~~l----------g~~dfypngg~~q 236 (432)
T 1gpl_A 203 VIHTDISPILPSLGFGMSQKV----------GHMDFFPNGGKDM 236 (432)
T ss_dssp EECSCCSCHHHHCCCBCSSCC----------SSEEEEEGGGSSC
T ss_pred EEEcCCccccccccccccccc----------cceEEccCCCCCC
Confidence 999999999886 222222 2455678888853
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-16 Score=134.72 Aligned_cols=214 Identities=12% Similarity=0.051 Sum_probs=135.4
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC---CCc-----hh---hh-hhhcCCCcceEEEEccCCCCCC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG---PAN-----EP---IK-TLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~---~~~-----~~---~~-~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
..++..+..++..|. ..++.|+||++||++... ..+ .. .+ +.|+++||.++.+|+++++.+.
T Consensus 44 ~~DG~~L~~~l~~P~------~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 44 MRDGVKLYTVIVIPK------NARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp CTTSCEEEEEEEEET------TCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred CCCCcEEEEEEEecC------CCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 345666666555421 125679999999988541 111 11 23 6788999999999999886543
Q ss_pred cccCCCC-cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcc
Q 025550 82 VTCNYGA-VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG 160 (251)
Q Consensus 82 ~~~~~g~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 160 (251)
....... ....| . ..+.....|+.++++++.+ +......+|+++|+|+||.+++.++...|+.++
T Consensus 118 g~~~~~~~~~~~~---~-----~~g~~~~~D~~~~i~~l~~------~~~~~d~rvgl~G~SyGG~~al~~a~~~~~~lk 183 (652)
T 2b9v_A 118 GDYVMTRPPHGPL---N-----PTKTDETTDAWDTVDWLVH------NVPESNGRVGMTGSSYEGFTVVMALLDPHPALK 183 (652)
T ss_dssp SCCCTTCCCSBTT---B-----CSSCCHHHHHHHHHHHHHH------SCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEE
T ss_pred Ccccccccccccc---c-----ccccchhhHHHHHHHHHHh------cCCCCCCCEEEEecCHHHHHHHHHHhcCCCceE
Confidence 2110000 00000 0 0001223333333333322 202223599999999999999999988888999
Q ss_pred eEEEeccCCCCcc--h-------------h-------------------------h---------hh-------------
Q 025550 161 GGAIFSGWVPFNA--S-------------L-------------------------I---------DQ------------- 178 (251)
Q Consensus 161 ~~i~~~~~~~~~~--~-------------~-------------------------~---------~~------------- 178 (251)
++|..++..+... . . . ..
T Consensus 184 a~v~~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 263 (652)
T 2b9v_A 184 VAAPESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMH 263 (652)
T ss_dssp EEEEEEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHH
T ss_pred EEEecccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHH
Confidence 9999887554211 0 0 0 00
Q ss_pred --------hc-------ccC--CCCCEEEEccCCCCcccchhcccchHHHHhcC--CeeEEEEeCCCCCCCCH-------
Q 025550 179 --------FT-------SDA--KKTPILWSHGMADRTVLFEAGQAGPPFLEQAG--ISCEFKAYPGLGHSISN------- 232 (251)
Q Consensus 179 --------~~-------~~~--~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~--~~~~~~~~~g~~H~~~~------- 232 (251)
+. ..+ +++|+|+++|..|.. +...+.++++.|++.+ .+.++++.|+ +|....
T Consensus 264 ~~p~~d~yw~~~Sp~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~ 341 (652)
T 2b9v_A 264 AHPAYDAFWQGQALDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLG 341 (652)
T ss_dssp HCCSSSHHHHTTCHHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEET
T ss_pred hCCCCChHHhcCChhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCC
Confidence 00 124 899999999999997 5567778999999988 8889999997 797521
Q ss_pred ----------H-HHHHHHHHHHHhhcCC
Q 025550 233 ----------E-ELRNLESWIKTRMSCS 249 (251)
Q Consensus 233 ----------~-~~~~~~~~l~~~l~~~ 249 (251)
. ..+.+.+||.++|+..
T Consensus 342 ~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 342 PLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp TEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred ccccccccchhhhhhHHHHHHHHHhCCC
Confidence 1 1467899999999753
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.3e-16 Score=123.10 Aligned_cols=174 Identities=18% Similarity=0.125 Sum_probs=111.6
Q ss_pred CccEEEEEecCCCCCCC-ch-hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 38 ARNFILWLHGLGDSGPA-NE-PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~-~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..+.|||+||++++... |. .+++.|.+.||.++.+|+|+++.. + ....
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~---------------------------~---~~~~ 79 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLN---------------------------D---TQVN 79 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCS---------------------------C---HHHH
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCC---------------------------c---HHHH
Confidence 45679999999998876 88 788899989999999999865321 1 1122
Q ss_pred HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCCCCcc------------------
Q 025550 116 VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWVPFNA------------------ 173 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~~~~~------------------ 173 (251)
.+.+.+.++.+. .. +.+++.|+||||||.++..++..+| +.++++|++++......
T Consensus 80 ~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 157 (317)
T 1tca_A 80 TEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQ 157 (317)
T ss_dssp HHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHT
T ss_pred HHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhhhhhhhhcCchHHhh
Confidence 334444444433 22 3478999999999999998887765 78999999988543111
Q ss_pred ----hhhhhhcc---cCCCCCEEEEccCCCCcccchh--cccchHHHHhcCCeeEEEE----eCCCCCCCC---HHHHHH
Q 025550 174 ----SLIDQFTS---DAKKTPILWSHGMADRTVLFEA--GQAGPPFLEQAGISCEFKA----YPGLGHSIS---NEELRN 237 (251)
Q Consensus 174 ----~~~~~~~~---~~~~~p~l~~~g~~D~~~~~~~--~~~~~~~l~~~~~~~~~~~----~~g~~H~~~---~~~~~~ 237 (251)
.+...+.. ....+|+++++|+.|.++++.. ++.....+... ..+.+.. .++.+|... .+.++.
T Consensus 158 ~~~s~f~~~L~~~~~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~a-~~~~~~~~~~~~~~~gH~~~l~~p~~~~~ 236 (317)
T 1tca_A 158 TTGSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNG-KNVQAQAVCGPLFVIDHAGSLTSQFSYVV 236 (317)
T ss_dssp BTTCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTS-EEEEHHHHHCTTCCCCTTHHHHBHHHHHH
T ss_pred CcCcHHHHHHHhcCCCCCCCCEEEEEeCCCCeECCccccccchhhhccCC-ccEEeeeccCCCCccCcccccCCHHHHHH
Confidence 01111110 1247899999999999998775 22222222221 0111111 157899754 344677
Q ss_pred HHHHHHH
Q 025550 238 LESWIKT 244 (251)
Q Consensus 238 ~~~~l~~ 244 (251)
+.+||..
T Consensus 237 v~~~L~~ 243 (317)
T 1tca_A 237 GRSALRS 243 (317)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 7777765
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=9.4e-16 Score=123.65 Aligned_cols=121 Identities=17% Similarity=0.075 Sum_probs=84.0
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcC------CCcceEEEEccCCCCCCcccCC
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTS------PEFKLTKWSFPSAPNNPVTCNY 86 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~ 86 (251)
+..++..+...... +..+..+.|||+||++++...|..++..|.+ .||.++++|+||++.+....
T Consensus 90 ~~i~g~~i~~~~~~-------~~~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~-- 160 (408)
T 3g02_A 90 TEIEGLTIHFAALF-------SEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP-- 160 (408)
T ss_dssp EEETTEEEEEEEEC-------CSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSC--
T ss_pred EEECCEEEEEEEec-------CCCCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCC--
Confidence 34467776655443 2234557899999999999999998887776 58999999999886542110
Q ss_pred CCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEe
Q 025550 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIF 165 (251)
Q Consensus 87 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~ 165 (251)
.....++.+.++.+.++++ +.+++ ++++++|||+||.++..+|.++|+.+..++.+
T Consensus 161 -------------------~~~~~~~~~~a~~~~~l~~---~lg~~-~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~ 216 (408)
T 3g02_A 161 -------------------LDKDFGLMDNARVVDQLMK---DLGFG-SGYIIQGGDIGSFVGRLLGVGFDACKAVHLNF 216 (408)
T ss_dssp -------------------SSSCCCHHHHHHHHHHHHH---HTTCT-TCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred -------------------CCCCCCHHHHHHHHHHHHH---HhCCC-CCEEEeCCCchHHHHHHHHHhCCCceEEEEeC
Confidence 0112345555666666666 33332 38999999999999999999997644444443
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=9.5e-16 Score=118.29 Aligned_cols=208 Identities=12% Similarity=0.027 Sum_probs=123.3
Q ss_pred CCCCccEEEEEecCCCCCCCchhhh---hhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCC-CCCCC----
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV-TASSP---- 106 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~-~~~~~---- 106 (251)
.+++.|+|+++||.+++..+|.... +...+.+..++..+..-... ....+ ...+++...... ..+..
T Consensus 45 ~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~---~~~~~--~~~~~~~g~~~~~y~d~~~~p~ 119 (299)
T 4fol_A 45 RNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGD---EVAND--PEGSWDFGQGAGFYLNATQEPY 119 (299)
T ss_dssp ---CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCST---TSCCC--TTCCSSSBTTBCTTCBCCSHHH
T ss_pred cCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCccee---ecCCC--cccccccccCCccccccccCcc
Confidence 4567899999999999888776632 24444555555544321100 00000 011111100000 00000
Q ss_pred -CChhHHHHHHHHHHHHHHHHHHc-----CCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCCCcchhh--
Q 025550 107 -KDESSLLKAVRNVHAMIDKEVAA-----GIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVPFNASLI-- 176 (251)
Q Consensus 107 -~~~~~~~~~~~~l~~~i~~~~~~-----~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~~~~~~~-- 176 (251)
....-....+++|..+++..... ..+.++.+|.||||||..|+.+++++ |+.+.++.++++.........
T Consensus 120 ~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~~~~s~s~~~~p~~~~~~~ 199 (299)
T 4fol_A 120 AQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQ 199 (299)
T ss_dssp HTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCSEEEEESCCCCGGGSHHHH
T ss_pred ccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceEEEEecccccCcccccccc
Confidence 01112334466777777653311 12346799999999999999999985 667888888888664322110
Q ss_pred --------------------hhhcc--cCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCe--eEEEEeCCCCCCCC
Q 025550 177 --------------------DQFTS--DAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGIS--CEFKAYPGLGHSIS 231 (251)
Q Consensus 177 --------------------~~~~~--~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~ 231 (251)
..+.. .....++++.+|+.|.+...+ ..+.+.+.+++.|.+ +++...+|.+|.+.
T Consensus 200 ~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~ 279 (299)
T 4fol_A 200 KAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYY 279 (299)
T ss_dssp HHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHH
T ss_pred cccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHH
Confidence 00111 123467999999999886533 235678888888766 78999999899753
Q ss_pred --HHHHHHHHHHHHHhhc
Q 025550 232 --NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 --~~~~~~~~~~l~~~l~ 247 (251)
...+++-++|..++|.
T Consensus 280 f~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 280 FVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 6678888999988875
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=8.5e-16 Score=124.44 Aligned_cols=66 Identities=20% Similarity=0.194 Sum_probs=60.0
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH-HHHHHHHHHHHHhhcCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN-EELRNLESWIKTRMSCS 249 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~~~ 249 (251)
.++|++++||++|.++|.+.++++++.+++.|.++++++|++.+|.... ....++.+||.+++..+
T Consensus 343 ~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~~~~~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 343 PKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHLTAEIFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp CCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCccCchhhhHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999999999999999999999998764 56899999999998653
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.68 E-value=9e-16 Score=114.54 Aligned_cols=165 Identities=15% Similarity=0.140 Sum_probs=114.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.+.|+++||++++...|..+++.+.. +.++.+|+|+.+. ..+.
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~~--~~v~~~d~~g~~~-----------------------------------~~~~ 59 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLPS--YKLCAFDFIEEED-----------------------------------RLDR 59 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCTT--EEEEEECCCCSTT-----------------------------------HHHH
T ss_pred CCCEEEECCCCCchHHHHHHHHhcCC--CeEEEecCCCHHH-----------------------------------HHHH
Confidence 47899999999999999999998864 9999999884311 0223
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCCCCcc-h--------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWVPFNA-S-------------------- 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~~~~~-~-------------------- 174 (251)
+.+.++.+ . ..+++.++|||+||.+++.++.+.+ +.+++++++++..+... .
T Consensus 60 ~~~~i~~~---~-~~~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (230)
T 1jmk_C 60 YADLIQKL---Q-PEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDN 135 (230)
T ss_dssp HHHHHHHH---C-CSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTC
T ss_pred HHHHHHHh---C-CCCCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhh
Confidence 33333322 2 2357999999999999999998764 56888888876543210 0
Q ss_pred -----------h------hhhh-----cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCC--CC
Q 025550 175 -----------L------IDQF-----TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH--SI 230 (251)
Q Consensus 175 -----------~------~~~~-----~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H--~~ 230 (251)
+ ...+ .....++|+++++|++|..++ .....+.+. ...+++++.++| +| .+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~w~~~---~~~~~~~~~i~g-~H~~~~ 210 (230)
T 1jmk_C 136 EALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIP-EWLASWEEA---TTGAYRMKRGFG-THAEML 210 (230)
T ss_dssp SGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCC-TTEECSGGG---BSSCEEEEECSS-CGGGTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCc-cccchHHHh---cCCCeEEEEecC-ChHHHc
Confidence 0 0000 123478999999999999876 333333332 223578999997 99 78
Q ss_pred CHHHHHHHHHHHHHhhcCC
Q 025550 231 SNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 231 ~~~~~~~~~~~l~~~l~~~ 249 (251)
..+..+.+.+.|.++|..+
T Consensus 211 ~~~~~~~~~~~i~~~l~~~ 229 (230)
T 1jmk_C 211 QGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp SHHHHHHHHHHHHHHHTCB
T ss_pred CcHhHHHHHHHHHHHHhhc
Confidence 8888888888888888653
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-16 Score=118.63 Aligned_cols=171 Identities=13% Similarity=0.205 Sum_probs=105.0
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
...+.||++||++++...|..+++.|. .+|.++.+|+||++.+. .....++.+.+
T Consensus 11 ~~~~~lv~lhg~g~~~~~~~~~~~~L~-~~~~vi~~Dl~GhG~S~------------------------~~~~~~~~~~~ 65 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSASFRPLHAFLQ-GECEMLAAEPPGHGTNQ------------------------TSAIEDLEELT 65 (242)
T ss_dssp TCCCEEESSCCCCHHHHHHHHHHHHHC-CSCCCEEEECCSSCCSC------------------------CCTTTHHHHHH
T ss_pred CCCceEEEECCCCCCHHHHHHHHHhCC-CCeEEEEEeCCCCCCCC------------------------CCCcCCHHHHH
Confidence 455689999999999999999999886 47999999999876531 00112333222
Q ss_pred HHHHHHHHHHHHcCCC-CCcEEEEEeChhHHHHHHHHHh------cCCCcceEEEec---cCCCC------c-chh----
Q 025550 117 RNVHAMIDKEVAAGID-PNNVFVCGFSQGGALTLASVLL------YPRKLGGGAIFS---GWVPF------N-ASL---- 175 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~------~p~~~~~~i~~~---~~~~~------~-~~~---- 175 (251)
+.+. + ..++. .+++.|+||||||.+++.+|.+ +|+. +++.+ +.... . ...
T Consensus 66 ~~~~---~---~l~~~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~---v~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (242)
T 2k2q_B 66 DLYK---Q---ELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA---VIISAIQPPHIQRKKVSHLPDDQFLDHI 136 (242)
T ss_dssp HHTT---T---TCCCCCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS---EEEEEEECSCCCSCCCSSCTTHHHHHTT
T ss_pred HHHH---H---HHHhhcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE---EEEECCCCCCCCcccccCCCHHHHHHHH
Confidence 2221 1 22332 2689999999999999999987 4543 33222 10000 0 000
Q ss_pred ----------------hhh--------------hc---ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEE
Q 025550 176 ----------------IDQ--------------FT---SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 176 ----------------~~~--------------~~---~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
... .. ...+++|+++++|++|..++ ... +.+++.-...++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~-~~~----~~~~~~~~~~~~~~ 211 (242)
T 2k2q_B 137 IQLGGMPAELVENKEVMSFFLPSFRSDYRALEQFELYDLAQIQSPVHVFNGLDDKKCI-RDA----EGWKKWAKDITFHQ 211 (242)
T ss_dssp CCTTCCCCTTTHHHHTTTTCCSCHHHHHHHHTCCCCSCCTTCCCSEEEEEECSSCCHH-HHH----HHHHTTCCCSEEEE
T ss_pred HHhCCCChHHhcCHHHHHHHHHHHHHHHHHHHhcccCCCCccCCCEEEEeeCCCCcCH-HHH----HHHHHHhcCCeEEE
Confidence 000 00 12478999999999998754 222 23333322345777
Q ss_pred eCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 223 YPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 223 ~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+++ ||....+..+.+.+.+.++|.
T Consensus 212 ~~~-gH~~~~e~p~~~~~~i~~fl~ 235 (242)
T 2k2q_B 212 FDG-GHMFLLSQTEEVAERIFAILN 235 (242)
T ss_dssp EEC-CCSHHHHHCHHHHHHHHHHHH
T ss_pred EeC-CceeEcCCHHHHHHHHHHHhh
Confidence 886 998877766666666666554
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.1e-16 Score=120.22 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-hhhhh----c-ccCCCCCEE
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS-LIDQF----T-SDAKKTPIL 189 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~-~~~~~----~-~~~~~~p~l 189 (251)
.+++...++. +..++..+ +|+||||||.+++.++.++|+.+++++++||.+..... +.... . ......|++
T Consensus 122 ~~el~p~i~~--~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (331)
T 3gff_A 122 EKELAPSIES--QLRTNGIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFDSPHYLTLLEERVVKGDFKQKQLF 198 (331)
T ss_dssp HHTHHHHHHH--HSCEEEEE-EEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTTTTHHHHHHHHHHHHCCCSSEEEE
T ss_pred HHHHHHHHHH--HCCCCCCe-EEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCChHHHHHHHHHHhhcccCCCCeEE
Confidence 3455555554 44555444 79999999999999999999999999999996533221 11111 1 112567999
Q ss_pred EEccCCCC-------cccchhcccchHHHHhc---CCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhhc
Q 025550 190 WSHGMADR-------TVLFEAGQAGPPFLEQA---GISCEFKAYPGLGHSIS-NEELRNLESWIKTRMS 247 (251)
Q Consensus 190 ~~~g~~D~-------~~~~~~~~~~~~~l~~~---~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~ 247 (251)
+.+|+.|. .++.+.++++.+.|++. |.++++.++||.+|... .....+.++||-....
T Consensus 199 l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~~~~~~~~pg~~H~sv~~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 199 MAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGLGFMAKYYPEETHQSVSHIGLYDGIRHLFKDFA 267 (331)
T ss_dssp EEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTEEEEEEECTTCCTTTHHHHHHHHHHHHHHGGGC
T ss_pred EEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCceEEEEECCCCCccccHHHHHHHHHHHHHhhcC
Confidence 99999998 45667778899999986 77899999999999764 4556777777766554
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.5e-15 Score=111.83 Aligned_cols=165 Identities=10% Similarity=0.063 Sum_probs=110.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|+++||++++...|..+++.+. .++.++.+|+|+... .++
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~~~-----------------------------------~~~ 64 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLN-HKAAVYGFHFIEEDS-----------------------------------RIE 64 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTT-TTSEEEEECCCCSTT-----------------------------------HHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhC-CCceEEEEcCCCHHH-----------------------------------HHH
Confidence 45789999999999999999998886 689999999884210 123
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcc--------h------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNA--------S------------ 174 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~--------~------------ 174 (251)
.+.+.++. .. ..+++.++|||+||.+++.+|.+. ++.+.+++++++..+... .
T Consensus 65 ~~~~~i~~---~~-~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (244)
T 2cb9_A 65 QYVSRITE---IQ-PEGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRET 140 (244)
T ss_dssp HHHHHHHH---HC-SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHH
T ss_pred HHHHHHHH---hC-CCCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHH
Confidence 33343432 11 235799999999999999999875 567889998887553110 0
Q ss_pred h------hhh-----hcccCCCCCEEEEccC--CCCcccchhcccchHHHHhcCCeeEEEEeCCCCC--CCCHHHHHHHH
Q 025550 175 L------IDQ-----FTSDAKKTPILWSHGM--ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGH--SISNEELRNLE 239 (251)
Q Consensus 175 ~------~~~-----~~~~~~~~p~l~~~g~--~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H--~~~~~~~~~~~ 239 (251)
+ ... ......++|+++++|+ +|.. +.+....+.+.+ ..+++++.++| +| .+..+..+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~---~~~~~~~~i~g-gH~~~~~~~~~~~~~ 215 (244)
T 2cb9_A 141 VMQKKRCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAA---EEGYAEYTGYG-AHKDMLEGEFAEKNA 215 (244)
T ss_dssp HTHHHHHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGB---SSCEEEEECSS-BGGGTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCcCCCEEEEEccCccccc-cccchhHHHHhc---CCCCEEEEecC-ChHHHcChHHHHHHH
Confidence 0 000 0123478999999999 8873 444333333322 23578999997 99 67666666655
Q ss_pred HHHHHhhc
Q 025550 240 SWIKTRMS 247 (251)
Q Consensus 240 ~~l~~~l~ 247 (251)
+.|.++|.
T Consensus 216 ~~i~~~L~ 223 (244)
T 2cb9_A 216 NIILNILD 223 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55555553
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-15 Score=119.56 Aligned_cols=175 Identities=9% Similarity=0.069 Sum_probs=118.8
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|+++||++++...|..+++.+ ..++.++.+|+|+.+... ....++.+.++
T Consensus 100 ~~~~l~~lhg~~~~~~~~~~l~~~L-~~~~~v~~~d~~g~~~~~-------------------------~~~~~~~~~a~ 153 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQFSVLSRYL-DPQWSIIGIQSPRPNGPM-------------------------QTAANLDEVCE 153 (329)
T ss_dssp SSCEEEEECCTTSCCGGGGGGGGTS-CTTCEEEEECCCTTTSHH-------------------------HHCSSHHHHHH
T ss_pred CCCcEEEEeCCcccchHHHHHHHhc-CCCCeEEEeeCCCCCCCC-------------------------CCCCCHHHHHH
Confidence 4578999999999999999999988 478999999998653210 00123444444
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh---cCCCcceEEEeccCCCCcchh------------h------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL---YPRKLGGGAIFSGWVPFNASL------------I------ 176 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---~p~~~~~~i~~~~~~~~~~~~------------~------ 176 (251)
.+.+.+... . ..+++.|+|||+||.+++.+|.+ .|+.+.+++++.++.+....+ .
T Consensus 154 ~~~~~i~~~---~-~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (329)
T 3tej_A 154 AHLATLLEQ---Q-PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINRE 229 (329)
T ss_dssp HHHHHHHHH---C-SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHH
T ss_pred HHHHHHHHh---C-CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHH
Confidence 444444421 1 34689999999999999999998 999999999998765432100 0
Q ss_pred -------------------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC
Q 025550 177 -------------------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG 225 (251)
Q Consensus 177 -------------------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g 225 (251)
.........+|++++.|+.|...+.+.... ++..-.+++++.+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~----w~~~~~~~~~~~v~g 305 (329)
T 3tej_A 230 REAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERA----WSPWIAELDIYRQDC 305 (329)
T ss_dssp HHHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHH----HTTTEEEEEEEEESS
T ss_pred HHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhh----HHHhcCCcEEEEecC
Confidence 000112357899999999998766543222 322223588899995
Q ss_pred CCCCCC--HHHHHHHHHHHHHhhc
Q 025550 226 LGHSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 226 ~~H~~~--~~~~~~~~~~l~~~l~ 247 (251)
+|... .+..+.+.+.|.++|.
T Consensus 306 -~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 306 -AHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp -CGGGGGSTTTHHHHHHHHHHHHC
T ss_pred -ChHHhCCChHHHHHHHHHHHHhc
Confidence 89743 3445777777777764
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.60 E-value=9.4e-15 Score=123.16 Aligned_cols=201 Identities=10% Similarity=-0.009 Sum_probs=129.2
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC---chhhh-hhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA---NEPIK-TLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
..++..+...+..| ....+.|+||++||++..... |...+ +.|+++||.++.+|+++++.+..
T Consensus 16 ~~DG~~L~~~~~~P------~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g------- 82 (587)
T 3i2k_A 16 MRDGVRLAVDLYRP------DADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEG------- 82 (587)
T ss_dssp CTTSCEEEEEEEEE------CCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCS-------
T ss_pred CCCCCEEEEEEEEC------CCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCC-------
Confidence 34666666655442 123578999999998876532 32244 78889999999999998865421
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC-
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW- 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~- 168 (251)
.+.. .... .+++.++++.+.+......+|+++|+|+||.+++.++...|+.++++|..++.
T Consensus 83 --~~~~---------~~~~-------~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~ 144 (587)
T 3i2k_A 83 --EFVP---------HVDD-------EADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASA 144 (587)
T ss_dssp --CCCT---------TTTH-------HHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCS
T ss_pred --cccc---------ccch-------hHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcc
Confidence 1100 0112 22333333332222233479999999999999999999989899999999876
Q ss_pred CCCcch---------------hh------------------------------------------------------hh-
Q 025550 169 VPFNAS---------------LI------------------------------------------------------DQ- 178 (251)
Q Consensus 169 ~~~~~~---------------~~------------------------------------------------------~~- 178 (251)
.+.... +. ..
T Consensus 145 ~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (587)
T 3i2k_A 145 DLYRAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQ 224 (587)
T ss_dssp CTCCCCCSCTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHT
T ss_pred cccccceeecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhh
Confidence 432110 00 00
Q ss_pred -hc----------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC----------
Q 025550 179 -FT----------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS---------- 231 (251)
Q Consensus 179 -~~----------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---------- 231 (251)
+. ..++++|+|+++|..|..++ .....++.+++.+. ..+++-|. .|...
T Consensus 225 ~~~~~~~d~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~~--~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g 300 (587)
T 3i2k_A 225 VVDHPDNDESWQSISLFERLGGLATPALITAGWYDGFVG--ESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFG 300 (587)
T ss_dssp TTTCCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTHH--HHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECC
T ss_pred hhcCCCCChHHhcCChhhhhccCCCCEEEEccCCCccch--HHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccC
Confidence 00 12488999999999998754 34567788876554 36666564 46421
Q ss_pred H-------HHHHHHHHHHHHhhcCC
Q 025550 232 N-------EELRNLESWIKTRMSCS 249 (251)
Q Consensus 232 ~-------~~~~~~~~~l~~~l~~~ 249 (251)
. +..+...+|+..+|+..
T Consensus 301 ~~~~~~~~~~~~~~~~wFD~~Lkg~ 325 (587)
T 3i2k_A 301 IAATYPIQEATTMHKAFFDRHLRGE 325 (587)
T ss_dssp GGGSCCHHHHHHHHHHHHHHHHSCC
T ss_pred CccccccchhhHHHHHHHHHHhcCC
Confidence 1 23488999999999854
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.60 E-value=4.5e-14 Score=110.56 Aligned_cols=176 Identities=13% Similarity=0.119 Sum_probs=115.1
Q ss_pred EEEEEec--CCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 41 FILWLHG--LGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 41 ~vv~~HG--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.++++|| .+++...|..+++.+. .++.++.+|+|+.+.... .+ ......++.+.++.
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~---------~~-----------~~~~~~~~~~~a~~ 149 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTG---------TG-----------TALLPADLDTALDA 149 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC------------C-----------BCCEESSHHHHHHH
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCCCCCCcc---------cc-----------cCCCCCCHHHHHHH
Confidence 8999998 6778888999998886 789999999997643200 00 00112344555555
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccCCCCcchhh------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGWVPFNASLI------------------ 176 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~~~~~~~~~------------------ 176 (251)
+.+.+.... +.+++.|+|||+||.+++.+|.+. ++.+++++++++..+......
T Consensus 150 ~~~~i~~~~----~~~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 225 (319)
T 2hfk_A 150 QARAILRAA----GDAPVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEP 225 (319)
T ss_dssp HHHHHHHHH----TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSC
T ss_pred HHHHHHHhc----CCCCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccc
Confidence 555555322 346799999999999999999886 456999999887654322100
Q ss_pred ----------------hhhcccCCCCCEEEEccCCCCcccchh-cccchHHHHhcCCeeEEEEeCCCCCCCC-HHHH---
Q 025550 177 ----------------DQFTSDAKKTPILWSHGMADRTVLFEA-GQAGPPFLEQAGISCEFKAYPGLGHSIS-NEEL--- 235 (251)
Q Consensus 177 ----------------~~~~~~~~~~p~l~~~g~~D~~~~~~~-~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~--- 235 (251)
..+.....++|+++++| .|..++... ...+.+.+ ...++++.+++ +|... .+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~---~~~~~~~~v~g-~H~~~~~e~~~~~ 300 (319)
T 2hfk_A 226 MSDARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHW---DLPHTVADVPG-DHFTMMRDHAPAV 300 (319)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCC---SSCSEEEEESS-CTTHHHHTCHHHH
T ss_pred cchHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhcC---CCCCEEEEeCC-CcHHHHHHhHHHH
Confidence 01123457899999999 998888765 44443322 22468888995 99853 2333
Q ss_pred -HHHHHHHHHhh
Q 025550 236 -RNLESWIKTRM 246 (251)
Q Consensus 236 -~~~~~~l~~~l 246 (251)
+.+.+||.+..
T Consensus 301 ~~~i~~~L~~~~ 312 (319)
T 2hfk_A 301 AEAVLSWLDAIE 312 (319)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC
Confidence 44555555443
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.59 E-value=2.5e-14 Score=110.13 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=72.9
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+...+.||++||++++...|..+++.|. +.++.+|+++.+ ...++.+.
T Consensus 21 ~~~~~~l~~~hg~~~~~~~~~~~~~~L~---~~v~~~d~~~~~-----------------------------~~~~~~~~ 68 (283)
T 3tjm_A 21 QSSERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTRAA-----------------------------PLDSIHSL 68 (283)
T ss_dssp CSSSCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCTTS-----------------------------CCSCHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHhcC---ceEEEEecCCCC-----------------------------CCCCHHHH
Confidence 3456789999999999999999999886 889999985321 12334555
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcc---eEEEeccC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLG---GGAIFSGW 168 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~---~~i~~~~~ 168 (251)
++.+.+.++ ... ..+++.|+||||||.+++.+|.+. |+.+. +++++++.
T Consensus 69 a~~~~~~i~---~~~-~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 69 AAYYIDCIR---QVQ-PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp HHHHHHHHT---TTC-CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred HHHHHHHHH---HhC-CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 555555554 222 236899999999999999999865 77788 99988874
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-14 Score=120.33 Aligned_cols=201 Identities=10% Similarity=0.053 Sum_probs=123.9
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC-Cch----------------------hhhhhhcCCCcceEE
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP-ANE----------------------PIKTLFTSPEFKLTK 71 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~----------------------~~~~~~~~~g~~~~~ 71 (251)
.++..+...+..|. ..++.|+||+.||++.... .+. ..++.|+++||.++.
T Consensus 49 ~DG~~L~a~l~~P~------~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~ 122 (560)
T 3iii_A 49 RDGEKLYINIFRPN------KDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVK 122 (560)
T ss_dssp TTSCEEEEEEEECS------SSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEE
T ss_pred CCCcEEEEEEEecC------CCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEE
Confidence 45566666555421 2467899999999997642 111 125688999999999
Q ss_pred EEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHH
Q 025550 72 WSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLA 150 (251)
Q Consensus 72 ~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~ 150 (251)
+|+++.+.+.. .+. ... ....+++.+.++.+. +...+ .+|+++|+|+||.+++.
T Consensus 123 ~D~RG~G~S~G---------~~~-----------~~~----~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~ 177 (560)
T 3iii_A 123 VALRGSDKSKG---------VLS-----------PWS----KREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWW 177 (560)
T ss_dssp EECTTSTTCCS---------CBC-----------TTS----HHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHH
T ss_pred EcCCCCCCCCC---------ccc-----------cCC----hhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHH
Confidence 99998765421 110 000 122333333333333 22233 79999999999999999
Q ss_pred HHHhcCCCcceEEEeccCCCCcch-----------hh---------------------hh---------------hcccC
Q 025550 151 SVLLYPRKLGGGAIFSGWVPFNAS-----------LI---------------------DQ---------------FTSDA 183 (251)
Q Consensus 151 ~a~~~p~~~~~~i~~~~~~~~~~~-----------~~---------------------~~---------------~~~~~ 183 (251)
+|...|+.++++|..++..+...+ +. .. ....+
T Consensus 178 ~a~~~p~~l~aiv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~~~~~ 257 (560)
T 3iii_A 178 VASLNPPHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPLSQ 257 (560)
T ss_dssp HHTTCCTTEEEEEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBCCGGG
T ss_pred HHhcCCCceEEEEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCCchhh
Confidence 999999899999999885542210 00 00 00135
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC---CCHHHHHHHHHHHHHhhcCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS---ISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~---~~~~~~~~~~~~l~~~l~~~ 249 (251)
+++|+|++.|-.|..+........++.++.. ...+++..+ +|+ +..+..+...+|+..+|+..
T Consensus 258 I~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~--~k~l~ih~~-~~~~~~~~~~~~~~~~~wfD~~LkG~ 323 (560)
T 3iii_A 258 IKTPLLTCASWSTQGLHNRGSFEGFKQAASE--EKWLYVHGR-KEWESYYARENLERQKSFFDFYLKEE 323 (560)
T ss_dssp CCSCEEEEEEGGGTTTTHHHHHHHHHHCCCS--SEEEEEESS-CHHHHHHSHHHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEeCCcCCCcccchhHHHHHHhcccc--CcEEEECCC-CCcCcccChhHHHHHHHHHHHHhCCC
Confidence 8999999999999733333333334444332 233433332 333 34556788999999999854
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.3e-14 Score=109.93 Aligned_cols=103 Identities=19% Similarity=0.224 Sum_probs=70.2
Q ss_pred cEEEEEecCCCCC---CCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 40 NFILWLHGLGDSG---PANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 40 ~~vv~~HG~~~~~---~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
+.||++||++++. ..|..+++.+++. |+.++.+|+ +++.+... ...| ..++.+
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~------~~~~---------------~~~~~~ 63 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDV------ENSF---------------FLNVNS 63 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHH------HHHH---------------HSCHHH
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCcccc------cccc---------------ccCHHH
Confidence 4599999999887 7899999988764 779998886 54321000 0011 012334
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-cceEEEecc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-LGGGAIFSG 167 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~~~~i~~~~ 167 (251)
.++.+.+.++.. ... .+++.++||||||.++..++.++|+. ++++|++++
T Consensus 64 ~~~~~~~~l~~~--~~l-~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 64 QVTTVCQILAKD--PKL-QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp HHHHHHHHHHSC--GGG-TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred HHHHHHHHHHhh--hhc-cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 444444444310 011 26899999999999999999999984 999998885
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=4.4e-15 Score=115.28 Aligned_cols=120 Identities=18% Similarity=0.247 Sum_probs=90.6
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcc-eEEEeccCC--CCc------------------chhhhhhc--c---
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG-GGAIFSGWV--PFN------------------ASLIDQFT--S--- 181 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~-~~i~~~~~~--~~~------------------~~~~~~~~--~--- 181 (251)
+.++|++||+|+|+|+||.+++.++..+|+.++ +++++++.. ... ..+..... .
T Consensus 5 ~~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (318)
T 2d81_A 5 AFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIAS 84 (318)
T ss_dssp CCCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBCC
T ss_pred hcCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhhcccCCh
Confidence 456789999999999999999999999999998 887777621 100 00000000 0
Q ss_pred -cC-CCCCEEEEccCCCCcccchhcccchHHHHhcCC--eeEEEEeCCCCCCCC-----------------------HHH
Q 025550 182 -DA-KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI--SCEFKAYPGLGHSIS-----------------------NEE 234 (251)
Q Consensus 182 -~~-~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~--~~~~~~~~g~~H~~~-----------------------~~~ 234 (251)
.+ ...|++++||+.|.+||++.++++++.|++.+. ++++++++|++|.+. .+.
T Consensus 85 ~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~~~~~d~ 164 (318)
T 2d81_A 85 VANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDG 164 (318)
T ss_dssp GGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSCH
T ss_pred hHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCcccCCCChH
Confidence 01 346999999999999999999999999998873 689999999999753 123
Q ss_pred HHHHHHHHHHhhc
Q 025550 235 LRNLESWIKTRMS 247 (251)
Q Consensus 235 ~~~~~~~l~~~l~ 247 (251)
...+.+||...++
T Consensus 165 ~~~i~~ff~g~~~ 177 (318)
T 2d81_A 165 AGAALKWIYGSLN 177 (318)
T ss_dssp HHHHHHHHHSSCC
T ss_pred HHHHHHHHhccCC
Confidence 5678888877665
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-13 Score=106.76 Aligned_cols=134 Identities=17% Similarity=0.113 Sum_probs=92.5
Q ss_pred CccEEEEEecCCCCC-CCch-hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 38 ARNFILWLHGLGDSG-PANE-PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~-~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..+.||++||++++. ..|. .+++.|.+.||.++.+|+|+++.. + ....
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~---------------------------~---~~~~ 113 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLN---------------------------D---TQVN 113 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCS---------------------------C---HHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCC---------------------------c---HHHH
Confidence 456799999999987 6787 888999989999999999865321 1 1122
Q ss_pred HHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCc-------------------
Q 025550 116 VRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFN------------------- 172 (251)
Q Consensus 116 ~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~------------------- 172 (251)
.+++.+.++.+. .. +.+++.|+||||||.++.+++..+ +++++++|.+++.....
T Consensus 114 ~~~la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~Gt~~a~l~~~~~~~~~a~~q~ 191 (316)
T 3icv_A 114 TEYMVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQ 191 (316)
T ss_dssp HHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBSCC------CCCCHHHHHT
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCCchhhhhhhhccccChhHHhh
Confidence 334444444433 33 346899999999999997766664 57899999998743211
Q ss_pred ---chhhhhhc---ccCCCCCEEEEccCCCCcccchh
Q 025550 173 ---ASLIDQFT---SDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 173 ---~~~~~~~~---~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
..+.+.+. .....+|...++...|.+|.+..
T Consensus 192 ~~gS~fl~~Ln~~~~~~~~v~~tsI~S~~D~iV~P~~ 228 (316)
T 3icv_A 192 TTGSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQV 228 (316)
T ss_dssp BTTCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCC
T ss_pred CCCCHHHHHHhhcCCCCCCCcEEEEEcCCCCCccCCc
Confidence 01111121 12346899999999999997665
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.5e-14 Score=114.99 Aligned_cols=193 Identities=14% Similarity=0.116 Sum_probs=112.6
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCc---ceEEEEccCCCCC-----CcccCCCCcC-CccccccCCC---C-
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEF---KLTKWSFPSAPNN-----PVTCNYGAVM-PSWFDIHEIP---V- 101 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~-----~~~~~~g~~~-~~w~~~~~~~---~- 101 (251)
...+.+.|||+||++++...|..+++.|.+.|| .++.+|+|+++.+ ... ..|... ..+......+ .
T Consensus 18 g~~~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~-~~G~~~~~G~n~~p~id~~~l~ 96 (484)
T 2zyr_A 18 AAEDFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDML-FSGLGSEFGLNISQIIDPETLD 96 (484)
T ss_dssp ---CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTT-TTTGGGHHHHHHGGGSCHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccc-cccccccccccccccccccccc
Confidence 344567899999999999999999999999999 7999999976521 000 001000 0000000000 0
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCCCCcchhhh
Q 025550 102 TASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWVPFNASLID 177 (251)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~~~~~~~~~ 177 (251)
..............++++.+.+..++ +.+ .+++.|+||||||.++..++.++| +.++++|++++.....
T Consensus 97 ~v~~~~~~~~~~~~~~dla~~L~~ll~~lg--~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~~d----- 169 (484)
T 2zyr_A 97 KILSKSRERLIDETFSRLDRVIDEALAESG--ADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWGVD----- 169 (484)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHHHHHHHC--CSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCSEE-----
T ss_pred ccccccccCchhhhHHHHHHHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccccc-----
Confidence 00000011223334445544444443 333 468999999999999999999987 4799999999876421
Q ss_pred hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC---HHHHHHHHHHHHHh
Q 025550 178 QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS---NEELRNLESWIKTR 245 (251)
Q Consensus 178 ~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~ 245 (251)
.....+++.+.|+.|.. + . ...-...+. . ..+.+++++++|... .+..+.+.+||...
T Consensus 170 ----~p~g~~~L~ilG~~d~~-p-~-V~~pss~L~-~--ga~~v~i~~a~H~~ll~dp~v~~~Vl~fL~~~ 230 (484)
T 2zyr_A 170 ----APEGIPTLAVFGNPKAL-P-A-LGLPEEKVV-Y--NATNVYFNNMTHVQLCTSPETFAVMFEFINGY 230 (484)
T ss_dssp ----CCTTSCEEEEEECGGGS-C-C-SSCCSSCCE-E--TSEEEEETTCCHHHHHHCHHHHHHHHHHHHSS
T ss_pred ----cCcCCHHHHHhCCCCcC-C-c-ccChhHhcC-C--CceEEEECCCCccccccCHHHHHHHHHHhccc
Confidence 11346788888876642 1 0 000001111 0 125567799999754 44466777777653
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-14 Score=114.64 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=85.0
Q ss_pred CCCccEEEEEecCCCCC-CCchh-hhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEP-IKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|+||++||++++. ..|.. +++.+.+ .++.++++|+++++.+. + .....+.
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~-----------~------------~~~~~~~ 123 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE-----------Y------------TQASYNT 123 (452)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC-----------H------------HHHHHHH
T ss_pred CCCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCc-----------h------------hHhHhhH
Confidence 45678999999999988 67877 6666554 59999999999764421 0 0112334
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
....+++.++++.+. +.+++.+++.|+|||+||.++..++.++|+++++++++++..+.
T Consensus 124 ~~~~~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p~ 183 (452)
T 1bu8_A 124 RVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPC 183 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCccc
Confidence 445566666666554 44666789999999999999999999999999999999886653
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.1e-14 Score=113.92 Aligned_cols=113 Identities=13% Similarity=0.155 Sum_probs=84.7
Q ss_pred CCCccEEEEEecCCCCC-CCchh-hhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEP-IKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|+||++||++++. ..|.. +++.+.+ .++.++++|+++++.+. + .....+.
T Consensus 67 ~~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~-----------~------------~~~~~~~ 123 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAE-----------Y------------TQAVQNI 123 (452)
T ss_dssp CTTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC-----------H------------HHHHHHH
T ss_pred CCCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccc-----------c------------HHHHHhH
Confidence 45578999999999988 67877 6676654 49999999999764321 0 0112334
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
....+++.++++.+. +.+++.+++.|+|||+||.++..++.++|+++++++++++..+.
T Consensus 124 ~~~~~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~p~ 183 (452)
T 1w52_X 124 RIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEPC 183 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccccc
Confidence 445566666666554 34666789999999999999999999999999999999886553
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.49 E-value=1.7e-13 Score=106.86 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=80.5
Q ss_pred CCccEEEEEecCCCCC------CCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 37 MARNFILWLHGLGDSG------PANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
++++.|||+||++++. ..|..+++.|.+.|+.++.+|+|+.+.+. ....
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~-------------------------~~~~ 60 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDD-------------------------GPNG 60 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSS-------------------------STTS
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCC-------------------------CCCC
Confidence 4568899999999887 77888999999999999999999664321 0123
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
...+..+++.++++. . +.+++.|+|||+||.++..++.++|+.+++++.+++..
T Consensus 61 ~~~~l~~~i~~~l~~---~--~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 61 RGEQLLAYVKTVLAA---T--GATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp HHHHHHHHHHHHHHH---H--CCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred CHHHHHHHHHHHHHH---h--CCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 344555556555553 2 35689999999999999999999999999999999743
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.9e-12 Score=100.78 Aligned_cols=198 Identities=10% Similarity=0.033 Sum_probs=114.1
Q ss_pred CCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCcccc-ccCCCCCCCCCCC
Q 025550 30 YSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFD-IHEIPVTASSPKD 108 (251)
Q Consensus 30 ~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~-~~~~~~~~~~~~~ 108 (251)
++|.....+.|+||.+||.+. ....|+.++.++.-...... ..|..+...|. .... ..+
T Consensus 97 ~lP~~~~~p~Pvii~i~~~~~-----------~~~~G~a~~~~~~~~v~~~~---~~gs~g~g~f~~ly~~------~~~ 156 (375)
T 3pic_A 97 TYPSSGTAPYPAIIGYGGGSL-----------PAPAGVAMINFNNDNIAAQV---NTGSRGQGKFYDLYGS------SHS 156 (375)
T ss_dssp ECCSSSCSSEEEEEEETTCSS-----------CCCTTCEEEEECHHHHSCCS---SGGGTTCSHHHHHHCT------TCS
T ss_pred ECCCCCCCCccEEEEECCCcc-----------ccCCCeEEEEeccccccccc---CCCCccceecccccCC------ccc
Confidence 333333567789999998321 24579999888652110000 00111111121 1110 112
Q ss_pred hhHHHHHHHHHHHHHHHHH-Hc--CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh----------
Q 025550 109 ESSLLKAVRNVHAMIDKEV-AA--GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL---------- 175 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~-~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~---------- 175 (251)
...+...+=.+...++.+. +. .+|++||+++|||+||..++.+++..+ +++++|..++...-...+
T Consensus 157 ~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~G~~~~R~~~~~~~~G 235 (375)
T 3pic_A 157 AGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAGGSACWRISDYLKSQG 235 (375)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTTTTSCHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCCchhhhhhhhhhcccC
Confidence 2233222223344444443 44 789999999999999999999999887 799998876432111000
Q ss_pred -------------------hhhh--------------cccCCCCCEEEEccCCCCcccchhccc----chHHHHhcCCe-
Q 025550 176 -------------------IDQF--------------TSDAKKTPILWSHGMADRTVLFEAGQA----GPPFLEQAGIS- 217 (251)
Q Consensus 176 -------------------~~~~--------------~~~~~~~p~l~~~g~~D~~~~~~~~~~----~~~~l~~~~~~- 217 (251)
...+ ..--...|+|++.| +|..++++.... ..+..+..|.+
T Consensus 236 e~v~~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~~~~~a~~VY~~lG~~d 314 (375)
T 3pic_A 236 ANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFGCMTAAHMAWQALGVSD 314 (375)
T ss_dssp CCCCCHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHHHHHHHHHHHHHTTCGG
T ss_pred ccccccccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHHHHHHHHHHHHHcCCcc
Confidence 0000 01126789999999 888888764432 22233444543
Q ss_pred -eEEEEeCCCCC-CCCHHHHHHHHHHHHHhhcCC
Q 025550 218 -CEFKAYPGLGH-SISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 218 -~~~~~~~g~~H-~~~~~~~~~~~~~l~~~l~~~ 249 (251)
+.+....|.+| .+..+..+++.+||.++|+.+
T Consensus 315 ~~~~~~~ggH~Hc~fp~~~~~~~~~F~~k~L~~~ 348 (375)
T 3pic_A 315 HMGYSQIGAHAHCAFPSNQQSQLTAFVQKFLLGQ 348 (375)
T ss_dssp GEEEECCSCCSTTCCCGGGHHHHHHHHHHHTSCC
T ss_pred ceEEEeeCCCccccCCHHHHHHHHHHHHHHhCCC
Confidence 66654334456 556677899999999999864
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.45 E-value=4.6e-13 Score=103.06 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=77.3
Q ss_pred CCccEEEEEecCCCCCC-----CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGDSGP-----ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+++|.|||+||++++.. .|..+.+.|.+.|+.++.+|+|+.+. ....
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~----------------------------s~~~ 56 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDT----------------------------SEVR 56 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSC----------------------------HHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCC----------------------------chhh
Confidence 45688999999988754 78889999999999999999986432 1123
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..+..+++.++++. . +.+++.|+|||+||.++..++.++|+.++++|.+++.
T Consensus 57 ~~~~~~~i~~~~~~---~--~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 57 GEQLLQQVEEIVAL---S--GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp HHHHHHHHHHHHHH---H--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHH---h--CCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 44445555555542 2 3468999999999999999999999999999999883
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.45 E-value=3.7e-13 Score=109.27 Aligned_cols=113 Identities=13% Similarity=0.083 Sum_probs=82.2
Q ss_pred CCCccEEEEEecCCCCCC-Cchh-hhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGP-ANEP-IKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~-~~~~-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|+||++||++++.. .|.. +++.+. ..++.++++|+++++... + .....+.
T Consensus 67 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~-----------y------------~~~~~~~ 123 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTS-----------Y------------TQAANNV 123 (450)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC-----------H------------HHHHHHH
T ss_pred CCCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCc-----------c------------hHHHHHH
Confidence 345789999999998875 6766 565544 458999999998653210 0 0112334
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
....+++.++++.+. +.+++.+++.|+||||||.+|..++.++|+ ++.++++.+..+..
T Consensus 124 ~~~a~~l~~ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~p~f 183 (450)
T 1rp1_A 124 RVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVEASF 183 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCCTTT
T ss_pred HHHHHHHHHHHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcccccc
Confidence 445566666666554 456677899999999999999999999998 99999998866543
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.44 E-value=3e-13 Score=109.75 Aligned_cols=113 Identities=13% Similarity=0.103 Sum_probs=82.7
Q ss_pred CCCccEEEEEecCCCCC-CCchh-hhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSG-PANEP-IKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+...|+||++||++++. ..|.. +++.+ +..++.++++|+++++... + .....+.
T Consensus 66 ~~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~-----------y------------~~~~~~~ 122 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTA-----------Y------------SQASQNV 122 (449)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC-----------H------------HHHHHHH
T ss_pred CCCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCc-----------c------------HHHHHHH
Confidence 45568999999999885 56776 66654 4578999999999654320 0 0011233
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
....+.+.++++.+. +.+++.+++.|+||||||.+|..++.++|+++++++++.+..+.
T Consensus 123 ~~v~~~la~ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~p~ 182 (449)
T 1hpl_A 123 RIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAEPC 182 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccccc
Confidence 444555666666554 45667789999999999999999999999999999999876553
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-13 Score=111.99 Aligned_cols=180 Identities=20% Similarity=0.181 Sum_probs=113.6
Q ss_pred CCccEEEEEecCC---CCCCCchhhhhhhcCC-CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLG---DSGPANEPIKTLFTSP-EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.+.|+||++||++ ++...+......|++. ++.++.++||..+. |......+. . .........|.
T Consensus 95 ~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~-------Gf~~~~~~~-~----~~~~n~gl~D~ 162 (489)
T 1qe3_A 95 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPF-------GFLHLSSFD-E----AYSDNLGLLDQ 162 (489)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHH-------HSCCCTTTC-T----TSCSCHHHHHH
T ss_pred CCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCccc-------ccCcccccc-c----cCCCCcchHHH
Confidence 3479999999976 3344333344555555 49999999984322 110000100 0 00112234455
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCCCcch---------h------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVPFNAS---------L------ 175 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~~~~~---------~------ 175 (251)
..+++++++.+. ..+.|+++|+|+|+|+||.++..++... +..++++|+.+|..+.... +
T Consensus 163 ~~al~wv~~~i~---~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~g~ 239 (489)
T 1qe3_A 163 AAALKWVRENIS---AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLGI 239 (489)
T ss_dssp HHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH---HhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 555666655544 5677899999999999999998877653 4679999999996632110 0
Q ss_pred ----hhhhcc----------------cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 176 ----IDQFTS----------------DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 176 ----~~~~~~----------------~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.+.+.. .....|.+.+++..|..+.+++...+.+..+..++++.+-.+++.+|.+.
T Consensus 240 ~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~Eg~~~~ 315 (489)
T 1qe3_A 240 NESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFF 315 (489)
T ss_dssp CTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETTGGGGTC
T ss_pred CHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecchhHhhc
Confidence 000000 01234467788888988887776666666666788999999999999764
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=102.90 Aligned_cols=109 Identities=11% Similarity=0.190 Sum_probs=75.1
Q ss_pred CCccEEEEEecCCC----------CCCCc----hhhhhhhcCCCcc---eEEEEccCCCCCCcccCCCCcCCccccccCC
Q 025550 37 MARNFILWLHGLGD----------SGPAN----EPIKTLFTSPEFK---LTKWSFPSAPNNPVTCNYGAVMPSWFDIHEI 99 (251)
Q Consensus 37 ~~~~~vv~~HG~~~----------~~~~~----~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~ 99 (251)
...+.|||+||+++ +...| ..+++.|.++|+. ++.+|+++++.+... .+
T Consensus 38 ~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~--------~~------ 103 (342)
T 2x5x_A 38 ATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSA--------QY------ 103 (342)
T ss_dssp CCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCG--------GG------
T ss_pred CCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCc--------cc------
Confidence 34456999999998 45678 8888999889998 999999865431100 00
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 100 PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
.........+..+.+..+++ +. +.+++.|+||||||.++..++.++ |++++++|++++..
T Consensus 104 -----~~~~~~~~~~l~~~I~~l~~---~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 104 -----NYHSSTKYAIIKTFIDKVKA---YT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp -----CCBCHHHHHHHHHHHHHHHH---HH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred -----cCCHHHHHHHHHHHHHHHHH---Hh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 01112223333333333333 33 346899999999999999999998 88999999998744
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.1e-11 Score=95.09 Aligned_cols=119 Identities=14% Similarity=0.082 Sum_probs=79.5
Q ss_pred cCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh-----------------------------hhhh
Q 025550 129 AGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL-----------------------------IDQF 179 (251)
Q Consensus 129 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~-----------------------------~~~~ 179 (251)
..+|++||+++|||+||..++.+++..+ +++++|..++...-...+ ...+
T Consensus 214 ~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y 292 (433)
T 4g4g_A 214 SGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAGGAACWRISDQQKAAGANIQTAAQIITENPWFSRNFDPH 292 (433)
T ss_dssp HCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTTTGGG
T ss_pred CCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCCchhhhhhchhhcccCcchhhhhcccCCccccchhhHhh
Confidence 5789999999999999999999999887 799999886532211000 0000
Q ss_pred c--------------ccCCCCCEEEEccCCCCcccchhcccchH----HHHhcCC--eeEEEEeCCCCCC-CCHHHHHHH
Q 025550 180 T--------------SDAKKTPILWSHGMADRTVLFEAGQAGPP----FLEQAGI--SCEFKAYPGLGHS-ISNEELRNL 238 (251)
Q Consensus 180 ~--------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~----~l~~~~~--~~~~~~~~g~~H~-~~~~~~~~~ 238 (251)
. .--...|++++.| +|..++++....... ..+..|. ++.+....|.+|. +..+..+.+
T Consensus 293 ~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~r~~~ 371 (433)
T 4g4g_A 293 VNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSSQNQDL 371 (433)
T ss_dssp TTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGGGHHHH
T ss_pred ccccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHHHHHHH
Confidence 0 0015789999999 888777654332222 2233343 3676655555664 455667899
Q ss_pred HHHHHHhhcCC
Q 025550 239 ESWIKTRMSCS 249 (251)
Q Consensus 239 ~~~l~~~l~~~ 249 (251)
.+||.++|+.+
T Consensus 372 ~~F~~k~Lkg~ 382 (433)
T 4g4g_A 372 NSYINYFLLGQ 382 (433)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHhCCC
Confidence 99999999764
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=9.4e-11 Score=91.55 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=68.2
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
....+.++++||.+++...|..+++.+. +.++.+++|+.+ ...++.+.
T Consensus 43 ~~~~~~l~~~hg~~g~~~~~~~~~~~l~---~~v~~~~~~~~~-----------------------------~~~~~~~~ 90 (316)
T 2px6_A 43 QSSERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTRAA-----------------------------PLDSIHSL 90 (316)
T ss_dssp CCSSCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCTTS-----------------------------CTTCHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHHhcC---CCEEEEECCCCC-----------------------------CcCCHHHH
Confidence 3456789999999999999999888774 888898887210 11234444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CC---cceEEEeccC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RK---LGGGAIFSGW 168 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~---~~~~i~~~~~ 168 (251)
++.+.+.+. ... ..+++.++|||+||.+++.++.+.+ +. +++++++++.
T Consensus 91 a~~~~~~i~---~~~-~~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 91 AAYYIDCIR---QVQ-PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp HHHHHHHHT---TTC-SSCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred HHHHHHHHH---HhC-CCCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 555544443 221 2357999999999999999998753 44 7888887764
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.14 E-value=9.9e-11 Score=96.76 Aligned_cols=124 Identities=19% Similarity=0.150 Sum_probs=76.4
Q ss_pred CCCCccEEEEEecCC---CCCCCchhhhhhhcCCC-cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLG---DSGPANEPIKTLFTSPE-FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
...+.|+||++||++ ++..........|++.| +.++.++||..+. +.+.. ........ .........
T Consensus 95 ~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~-----Gf~~~--~~~~~~~~--~~~~n~gl~ 165 (498)
T 2ogt_A 95 DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVF-----GFLHL--GDSFGEAY--AQAGNLGIL 165 (498)
T ss_dssp SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHH-----HCCCC--TTTTCGGG--TTGGGHHHH
T ss_pred CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchh-----hccCc--hhhccccc--cCCCCcccH
Confidence 345789999999988 44444333445565555 9999999994321 00000 00000000 000011234
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVP 170 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~ 170 (251)
|...+++++++.+. ..+.|+++|+|+|+|.||.++..++... +..++++|+.||...
T Consensus 166 D~~~al~wv~~~i~---~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 166 DQVAALRWVKENIA---AFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHH---HhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 55555555555444 5678899999999999999998877653 456999999998654
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.12 E-value=7.2e-10 Score=74.93 Aligned_cols=82 Identities=12% Similarity=0.012 Sum_probs=57.8
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.||++| ++...|..+ +. .+|.++.+|+|+++.+.. ... . ..+.+++
T Consensus 22 ~~~vv~~H---~~~~~~~~~---l~-~~~~v~~~d~~G~G~s~~-----------------------~~~-~-~~~~~~~ 69 (131)
T 2dst_A 22 GPPVLLVA---EEASRWPEA---LP-EGYAFYLLDLPGYGRTEG-----------------------PRM-A-PEELAHF 69 (131)
T ss_dssp SSEEEEES---SSGGGCCSC---CC-TTSEEEEECCTTSTTCCC-----------------------CCC-C-HHHHHHH
T ss_pred CCeEEEEc---CCHHHHHHH---Hh-CCcEEEEECCCCCCCCCC-----------------------CCC-C-HHHHHHH
Confidence 46899999 344455555 54 459999999998754310 111 1 5555666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 157 (251)
+.++++. . +.+++.++|||+||.+++.++.++|.
T Consensus 70 ~~~~~~~---~--~~~~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 70 VAGFAVM---M--NLGAPWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp HHHHHHH---T--TCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHH---c--CCCccEEEEEChHHHHHHHHHhcCCc
Confidence 6666663 2 34689999999999999999999884
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.1e-10 Score=90.71 Aligned_cols=119 Identities=17% Similarity=0.071 Sum_probs=73.0
Q ss_pred CccEEEEEecCCCCCCCchh----hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 38 ARNFILWLHGLGDSGPANEP----IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..| ||++||+.++...+.. +.+.....|..++.+|.|+++.+... +.. .. .. ......-...
T Consensus 38 g~P-i~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~---~~~--~~---~~-----~~~l~~lt~~ 103 (446)
T 3n2z_B 38 GGS-ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPF---GDN--SF---KD-----SRHLNFLTSE 103 (446)
T ss_dssp TCE-EEEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTT---GGG--GG---SC-----TTTSTTCSHH
T ss_pred CCC-EEEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCC---Ccc--cc---cc-----chhhccCCHH
Confidence 345 6777886665432211 12222233679999999988765211 000 00 00 0011112356
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 114 KAVRNVHAMIDKEVAA--GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
++++++..+++.+... +.+..+++++||||||.++..++.++|+.+.++|+.++.+.
T Consensus 104 q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssapv~ 162 (446)
T 3n2z_B 104 QALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIW 162 (446)
T ss_dssp HHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCTT
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEeccchh
Confidence 6677777777665421 22446899999999999999999999999999998876543
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.07 E-value=7.9e-10 Score=87.91 Aligned_cols=40 Identities=13% Similarity=0.168 Sum_probs=31.0
Q ss_pred CccEEEEEecCCCCCC-------Cchhh----hhhhcCCCcceEEEEccCC
Q 025550 38 ARNFILWLHGLGDSGP-------ANEPI----KTLFTSPEFKLTKWSFPSA 77 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~-------~~~~~----~~~~~~~g~~~~~~~~~~~ 77 (251)
+.+.|||+||++++.. .|..+ ++.|.+.||.++++|+|++
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~ 55 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPL 55 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSS
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCC
Confidence 4466999999987653 36544 4788889999999999865
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=99.06 E-value=2e-10 Score=96.00 Aligned_cols=113 Identities=17% Similarity=0.231 Sum_probs=75.0
Q ss_pred ccEEEEEecCCC---CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGD---SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|+||++||++. +..........+.+.|+.++.++||..+. | |...... .........|...+
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~-------G-----f~~~~~~--~~~~n~gl~D~~~a 180 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVY-------G-----FLSLNST--SVPGNAGLRDMVTL 180 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHH-------H-----HCCCSSS--SCCSCHHHHHHHHH
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCcc-------c-----cccCccc--CCCCchhHHHHHHH
Confidence 799999999763 22222234556777899999999985421 0 0000000 00112234555566
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccC
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGW 168 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~ 168 (251)
++++++.+. ..+.|+++|+|+|+|.||.++..++.. .+..++++|+.+|.
T Consensus 181 l~wv~~~i~---~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 181 LKWVQRNAH---FFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp HHHHHHHTG---GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred HHHHHHHHH---HhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 666655544 677899999999999999999988766 35679999999985
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=99.04 E-value=5.1e-10 Score=93.48 Aligned_cols=117 Identities=18% Similarity=0.140 Sum_probs=74.5
Q ss_pred CCCccEEEEEecCCC---CCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLGD---SGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
..+.|+||++||++. +..........|++ .|+.++.++||.... |+.... .. .....+....|
T Consensus 109 ~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~-------Gf~~~~----~~--~~~~~n~gl~D 175 (543)
T 2ha2_A 109 ASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTF-------GFLALP----GS--REAPGNVGLLD 175 (543)
T ss_dssp SSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHH-------HHCCCT----TC--SSCCSCHHHHH
T ss_pred CCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEeccccccc-------ccccCC----CC--CCCCCcccHHH
Confidence 346799999999873 22222223344544 799999999985311 000000 00 00011223456
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGW 168 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~ 168 (251)
...+++++++.+. ..+.|+++|+|+|+|.||.++..++... +..++++|+.||.
T Consensus 176 ~~~al~wv~~~i~---~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 176 QRLALQWVQENIA---AFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGT 231 (543)
T ss_dssp HHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHH---HhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCC
Confidence 6666666666555 6778999999999999999998776653 4579999999984
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=99.04 E-value=6.4e-10 Score=92.64 Aligned_cols=117 Identities=16% Similarity=0.140 Sum_probs=75.8
Q ss_pred CCccEEEEEecCCC---CCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGD---SGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
++.|+||++||++. +..........+++ .|+.++.++||..+. |+ ...... ..........|.
T Consensus 105 ~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~-------Gf-----~~~~~~-~~~~~n~gl~D~ 171 (529)
T 1p0i_A 105 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGAL-------GF-----LALPGN-PEAPGNMGLFDQ 171 (529)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHH-------HH-----CCCTTC-TTSCSCHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEeccccccc-------cc-----ccCCCC-CCCcCcccHHHH
Confidence 56899999999773 33332223344544 699999999985421 00 000000 000112234566
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
..+++++++.+. ..+.|+++|.|+|+|.||.++..++... +..++++|+.||..
T Consensus 172 ~~al~wv~~~i~---~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 172 QLALQWVQKNIA---AFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHH---HhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 666677766655 6788999999999999999998887664 34699999999854
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.7e-10 Score=88.91 Aligned_cols=43 Identities=7% Similarity=0.151 Sum_probs=33.3
Q ss_pred CCccEEEEEecCCCC--------CCCch----hhhhhhcCCCcceEEEEccCCCC
Q 025550 37 MARNFILWLHGLGDS--------GPANE----PIKTLFTSPEFKLTKWSFPSAPN 79 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~--------~~~~~----~~~~~~~~~g~~~~~~~~~~~~~ 79 (251)
...+.|||+||++++ ...|. .+++.|.+.||.++++|+|+++.
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~ 104 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALAS 104 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSC
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCC
Confidence 455779999999774 24454 48888888999999999997643
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.3e-10 Score=93.94 Aligned_cols=116 Identities=19% Similarity=0.212 Sum_probs=74.6
Q ss_pred CCCccEEEEEecCCC---CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGD---SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+++.|+||++||++. +...|... ......|+.++.++||..+. |. +..... ...+.....|.
T Consensus 112 ~~~~Pv~v~iHGG~~~~g~~~~~~~~-~la~~~g~vvv~~nYRlg~~-------gf-----~~~~~~--~~~~n~gl~D~ 176 (542)
T 2h7c_A 112 KNRLPVMVWIHGGGLMVGAASTYDGL-ALAAHENVVVVTIQYRLGIW-------GF-----FSTGDE--HSRGNWGHLDQ 176 (542)
T ss_dssp CCCEEEEEEECCSTTTSCCSTTSCCH-HHHHHHTCEEEEECCCCHHH-------HH-----CCCSST--TCCCCHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCccccCHH-HHHhcCCEEEEecCCCCccc-------cC-----CCCCcc--cCccchhHHHH
Confidence 357899999999763 23223221 22334799999999984321 00 000000 00112234555
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccCC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGWV 169 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~~ 169 (251)
..+++++++.+. ..+.|+++|+|+|+|.||.++..++.. .+..++++|+.||..
T Consensus 177 ~~al~wv~~ni~---~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 177 VAALRWVQDNIA---SFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 232 (542)
T ss_dssp HHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHH---HcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCc
Confidence 666666666554 678899999999999999999988876 356799999999854
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=7e-10 Score=92.49 Aligned_cols=117 Identities=22% Similarity=0.221 Sum_probs=75.2
Q ss_pred CCccEEEEEecCCC---CCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGD---SGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
++.|+||++||++. +..........|+ +.|+.++.++||..+. |+ ...... ..........|.
T Consensus 107 ~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~-------Gf-----~~~~~~-~~~~~n~gl~D~ 173 (537)
T 1ea5_A 107 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAF-------GF-----LALHGS-QEAPGNVGLLDQ 173 (537)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHH-------HH-----CCCTTC-SSSCSCHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCcccc-------cc-----ccCCCC-CCCcCccccHHH
Confidence 57899999999773 2322222334444 6799999999985321 00 000000 000112234566
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccCC
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGWV 169 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~~ 169 (251)
..+++++++.+. ..+.|+++|.|+|+|.||.++..++.. .+..++++|+.||..
T Consensus 174 ~~al~wv~~ni~---~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 174 RMALQWVHDNIQ---FFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHH---HhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 666666666555 678899999999999999999877765 235799999999854
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.95 E-value=3.2e-09 Score=88.22 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=73.8
Q ss_pred CCCccEEEEEecCCCC---CCCchhhhhh-hcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 36 PMARNFILWLHGLGDS---GPANEPIKTL-FTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~---~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+.+.|+||++||++.. ...+....-. ....|+.++.++||..+. |+....-... ....+....|
T Consensus 99 ~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~-------Gf~~~~~~~~-----~~~~n~gl~D 166 (522)
T 1ukc_A 99 QSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGAL-------GFLASEKVRQ-----NGDLNAGLLD 166 (522)
T ss_dssp TCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHH-------HHCCCHHHHH-----SSCTTHHHHH
T ss_pred CCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEeccccccc-------ccccchhccc-----cCCCChhHHH
Confidence 4567999999998732 2223221111 135699999999985431 1000000000 0001223456
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGWV 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~~ 169 (251)
...+++++++.+. ..+.|+++|+|+|+|.||..+..++... +..++++|+.+|..
T Consensus 167 ~~~al~wv~~ni~---~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~ 225 (522)
T 1ukc_A 167 QRKALRWVKQYIE---QFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFW 225 (522)
T ss_dssp HHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCC
T ss_pred HHHHHHHHHHHHH---HcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCc
Confidence 6666666666555 6788999999999999998877666553 55789999999864
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=91.97 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=73.7
Q ss_pred CCCccEEEEEecCCC---CCCCchhhhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCcc-ccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGD---SGPANEPIKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSW-FDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w-~~~~~~~~~~~~~~~~~ 110 (251)
.++.|+||++||++. +..........+++ .|+.++.++||.... |+..... +.... .....+.....
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~-------Gfl~~~~~~~~~~-~~~~~~n~gl~ 209 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAF-------GFLHLAPEMPSEF-AEEAPGNVGLW 209 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHH-------HHCCCGGGSCGGG-TTSSCSCHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccch-------hhccccccccccc-CCCCCCcccHH
Confidence 457899999999773 23222222344443 689999999984211 0000000 00000 00001122345
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
|...+++++++.+. ..+.|+++|.|+|+|.||.++..++... ...++++|+.||..
T Consensus 210 D~~~al~wv~~ni~---~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 210 DQALAIRWLKDNAH---AFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHHHHHHHSTG---GGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHHHHHH---HhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 66666666666554 5677899999999999999988776653 34689999998853
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.88 E-value=3.1e-09 Score=88.73 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=73.5
Q ss_pred CCCccEEEEEecCCCCCCC---ch--hhhh--hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCC
Q 025550 36 PMARNFILWLHGLGDSGPA---NE--PIKT--LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKD 108 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~---~~--~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~ 108 (251)
+.+.|+||++||++..... +. .++. .....|+.++.++||..+. |. ...............
T Consensus 119 ~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~-------gf-----~~~~~~~~~~~~n~g 186 (544)
T 1thg_A 119 DAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPF-------GF-----LGGDAITAEGNTNAG 186 (544)
T ss_dssp TCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHH-------HH-----CCSHHHHHHTCTTHH
T ss_pred CCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcc-------cC-----CCcccccccCCCchh
Confidence 4578999999997743322 21 1222 2224589999999996542 10 000000000011223
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccC
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGW 168 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~ 168 (251)
..|...+++++++.+. ..+.|+++|+|+|+|.||.++..++... +..++++|+.||.
T Consensus 187 l~D~~~Al~wv~~ni~---~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 187 LHDQRKGLEWVSDNIA---NFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHH---HhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccc
Confidence 4556666666666554 6778999999999999999998777653 4468999999984
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.2e-09 Score=87.74 Aligned_cols=118 Identities=18% Similarity=0.161 Sum_probs=74.3
Q ss_pred CCCccEEEEEecCCCCCCC---ch--hhhh--hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCC
Q 025550 36 PMARNFILWLHGLGDSGPA---NE--PIKT--LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKD 108 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~---~~--~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~ 108 (251)
.++.|+||++||++..... +. .++. .....|+.++.++||.++. |.....-... ....+..
T Consensus 111 ~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~-------gf~~~~~~~~-----~~~~n~g 178 (534)
T 1llf_A 111 GANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASW-------GFLAGDDIKA-----EGSGNAG 178 (534)
T ss_dssp TCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHH-------HHCCSHHHHH-----HTCTTHH
T ss_pred CCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCC-------CCCCcccccc-----cCCCchh
Confidence 4568999999998743222 22 2222 2334689999999996532 1000000000 0011223
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccC
Q 025550 109 ESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGW 168 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~ 168 (251)
..|...+++++++.+. ..+.|+++|+|+|+|.||..+..++... +..++++|+.||.
T Consensus 179 l~D~~~Al~wv~~ni~---~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 179 LKDQRLGMQWVADNIA---GFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHHH---HhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 4566666666666555 6788999999999999998887666653 4568999999984
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-09 Score=90.25 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=72.5
Q ss_pred CCCccEEEEEecCCC---CCCC------chhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCC
Q 025550 36 PMARNFILWLHGLGD---SGPA------NEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASS 105 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~---~~~~------~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~ 105 (251)
+++.|+||++||++. +... +......++ ..++.++.++||.++... +..... ...+
T Consensus 95 ~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gf------------l~~~~~--~~pg 160 (579)
T 2bce_A 95 SHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGF------------LSTGDS--NLPG 160 (579)
T ss_dssp CCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHH------------CCCSST--TCCC
T ss_pred CCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccC------------CcCCCC--CCCC
Confidence 356799999999872 2221 111123333 357999999998543210 000000 0001
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccC
Q 025550 106 PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGW 168 (251)
Q Consensus 106 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~ 168 (251)
.....|...+++++++.+. ..+.|+++|+|+|+|.||.++..++.. .+..++++|+.||.
T Consensus 161 n~gl~D~~~Al~wv~~ni~---~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 161 NYGLWDQHMAIAWVKRNIE---AFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CHHHHHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred ccchHHHHHHHHHHHHHHH---HhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 1124566666777766655 678899999999999999999877765 34568999988874
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=1.1e-08 Score=85.95 Aligned_cols=116 Identities=16% Similarity=0.137 Sum_probs=71.9
Q ss_pred CCCccEEEEEecCCCCCCCchh-hhhhhcC-CCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEP-IKTLFTS-PEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
+++.|+||++||++.....-.. -...|++ .++.++.++||.++. | ++..... ....+....|..
T Consensus 128 ~~~~Pv~v~iHGGg~~~g~~~~~~~~~la~~~~~vvv~~~YRl~~~-------G-----fl~~~~~--~~~~n~gl~D~~ 193 (574)
T 3bix_A 128 GGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVL-------G-----FLSTGDQ--AAKGNYGLLDLI 193 (574)
T ss_dssp -CCEEEEEECCCSSSSSCCGGGSCCHHHHHHHTCEEEEECCCCHHH-------H-----HCCCSSS--SCCCCHHHHHHH
T ss_pred CCCCcEEEEECCCcccCCCCCccCchhhhccCCEEEEEeCCcCccc-------c-----cCcCCCC--CCCCcccHHHHH
Confidence 3467999999998743222111 1123443 469999999996532 0 0000000 001122345566
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccC
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGW 168 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~ 168 (251)
.+++++.+.+. ..+.|+++|+|+|+|.||.++..++.... ..+.++|+.||.
T Consensus 194 ~al~wv~~ni~---~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 194 QALRWTSENIG---FFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred HHHHHHHHHHH---HhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 66666666555 67889999999999999999988876543 457888888863
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.8e-05 Score=71.77 Aligned_cols=164 Identities=15% Similarity=0.118 Sum_probs=94.6
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.++++|+.++....|..++..+. .+.++.+.+++. +.. .+
T Consensus 1057 ~~~~L~~l~~~~g~~~~y~~la~~L~--~~~v~~l~~~~~--------------------------------~~~---~~ 1099 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEE--------------------------------EDR---LD 1099 (1304)
T ss_dssp SCCEEECCCCTTCBGGGGHHHHTTCC--SCEEEECBCCCS--------------------------------TTH---HH
T ss_pred cCCcceeecccccchHHHHHHHhccc--ccceEeecccCH--------------------------------HHH---HH
Confidence 44678999999988888887777665 465555443211 111 11
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCCCCcch-------------hhh----
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWVPFNAS-------------LID---- 177 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~~~~~~-------------~~~---- 177 (251)
.+.+.+.. .. +..++.++|||+||.++..+|.+.. ..+..+++++++.+.... +..
T Consensus 1100 ~~~~~i~~---~~-~~gp~~l~G~S~Gg~lA~e~A~~L~~~g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1175 (1304)
T 2vsq_A 1100 RYADLIQK---LQ-PEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRD 1175 (1304)
T ss_dssp HHHHHHHH---HC-CSSCEEEEEETTHHHHHHHHHHHHHHSSCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC-
T ss_pred HHHHHHHH---hC-CCCCeEEEEecCCchHHHHHHHHHHhCCCceeEEEEecCcccccccccccccchhhHHHHHHhhhh
Confidence 22222321 11 2357999999999999999887643 346677777654321100 000
Q ss_pred --------------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 178 --------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 178 --------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.......++|++++.|+.|.. ..+....+.+.. ...++.+.++| +|...
T Consensus 1176 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~---~~~~~~~~v~G-~H~~m 1250 (1304)
T 2vsq_A 1176 NEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFD-IPEWLASWEEAT---TGVYRMKRGFG-THAEM 1250 (1304)
T ss_dssp ------CTTTGGGHHHHHHHHHHHHC-----CBSSEEEEEECSSCCC-CCSSEECSSTTB---SSCCCEEECSS-CTTGG
T ss_pred hhhhcchhcchHHHHHHHHHHHHHHHHhccCCcCCCEEEEEecCccc-cccchhhHHHHh---CCCeEEEEeCC-CHHHH
Confidence 000124678999999998863 333333333322 23567888996 99643
Q ss_pred --HHHHHHHHHHHHHhhc
Q 025550 232 --NEELRNLESWIKTRMS 247 (251)
Q Consensus 232 --~~~~~~~~~~l~~~l~ 247 (251)
.+....+.+.|.+.|.
T Consensus 1251 l~~~~~~~~a~~l~~~L~ 1268 (1304)
T 2vsq_A 1251 LQGETLDRNAEILLEFLN 1268 (1304)
T ss_dssp GSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 3445555555555553
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00056 Score=52.03 Aligned_cols=79 Identities=16% Similarity=0.062 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-c--ceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-L--GGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-~--~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.+.+.+.++.+.+. .+..++.+.|||+||.+|..++...... + ..++.+++.--....+.+.+... ..++-+.
T Consensus 120 ~~~~~~~l~~~~~~-~p~~~i~vtGHSLGGalA~l~a~~l~~~g~~~v~~~tfg~PrvGn~~fa~~~~~~---~~~~rvv 195 (279)
T 1tia_A 120 RDDIIKELKEVVAQ-NPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASPRVGNAALAKYITAQ---GNNFRFT 195 (279)
T ss_pred HHHHHHHHHHHHHH-CCCCeEEEEecCHHHHHHHHHHHHHHhcCCCceeEEEeCCCCCcCHHHHHHHHhC---CCEEEEE
Confidence 34444444444322 2346899999999999999888775321 1 23444554333333333333221 3344455
Q ss_pred cCCCCc
Q 025550 193 GMADRT 198 (251)
Q Consensus 193 g~~D~~ 198 (251)
-.+|.+
T Consensus 196 ~~~D~V 201 (279)
T 1tia_A 196 HTNDPV 201 (279)
T ss_pred ECCCcc
Confidence 556643
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0006 Score=55.93 Aligned_cols=61 Identities=20% Similarity=0.216 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCC
Q 025550 109 ESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWV 169 (251)
Q Consensus 109 ~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~ 169 (251)
.-..+++++++..++..+. ..+....+++++|-|+||.++..+-.++|+.+.|.++.|+.+
T Consensus 102 yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 102 LLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred cCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 3456777777777777665 455556799999999999999999999999999999888744
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00028 Score=53.45 Aligned_cols=128 Identities=15% Similarity=0.117 Sum_probs=67.6
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEE-EEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTK-WSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..+.+||.+||... +.+++.+.++.... .+.++. +.....+ .......
T Consensus 72 ~~~~iVva~RGT~~-------~~d~l~d~~~~~~~~~~~~~~---------~~vh~Gf---------------~~~~~~~ 120 (269)
T 1tib_A 72 TNKLIVLSFRGSRS-------IENWIGNLNFDLKEINDICSG---------CRGHDGF---------------TSSWRSV 120 (269)
T ss_dssp TTTEEEEEECCCSC-------THHHHTCCCCCEEECTTTSTT---------CEEEHHH---------------HHHHHHH
T ss_pred CCCEEEEEEeCCCC-------HHHHHHhcCeeeeecCCCCCC---------CEecHHH---------------HHHHHHH
Confidence 35678999999652 45567666665553 122110 1000111 1223333
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.+.+...++.+.+.. +..++.+.||||||.+|..++..... .+..+. +++..-....+.+.+... ....++-+.
T Consensus 121 ~~~~~~~~~~~~~~~-~~~~i~l~GHSLGGalA~l~a~~l~~~~~~~~~~t-fg~P~vg~~~fa~~~~~~-~~~~~~rvv 197 (269)
T 1tib_A 121 ADTLRQKVEDAVREH-PDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFS-YGAPRVGNRAFAEFLTVQ-TGGTLYRIT 197 (269)
T ss_dssp HHHHHHHHHHHHHHC-TTSEEEEEEETHHHHHHHHHHHHHTTSSSCEEEEE-ESCCCCBCHHHHHHHHHC-TTSCEEEEE
T ss_pred HHHHHHHHHHHHHHC-CCceEEEecCChHHHHHHHHHHHHHhcCCCeEEEE-eCCCCCCCHHHHHHHHhc-cCCCEEEEE
Confidence 445555555543222 34589999999999999999887643 244444 444332333333333221 134555555
Q ss_pred cCCCCc
Q 025550 193 GMADRT 198 (251)
Q Consensus 193 g~~D~~ 198 (251)
-.+|.+
T Consensus 198 ~~~D~V 203 (269)
T 1tib_A 198 HTNDIV 203 (269)
T ss_dssp ETTBSG
T ss_pred ECCCcc
Confidence 666654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00068 Score=55.16 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cCCCcceEEEeccCCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSGWVP 170 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~~~~ 170 (251)
..+....|..+++.. ......++.|+|+|+||..+..+|.. .+-.++++++.+|+++
T Consensus 122 a~~~~~~l~~f~~~~--p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~~d 182 (452)
T 1ivy_A 122 AQSNFEALQDFFRLF--PEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSS 182 (452)
T ss_dssp HHHHHHHHHHHHHHS--GGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSB
T ss_pred HHHHHHHHHHHHHhc--HHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCccC
Confidence 333445555555521 13345789999999999977766654 2456899999988664
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0019 Score=48.06 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHH-Hc-CCCCCcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCCCCcc
Q 025550 113 LKAVRNVHAMIDKEV-AA-GIDPNNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~~~~~ 173 (251)
.+.++++..+++... +. .....++.|+|.|+||..+..+|..- .-.++++++.+|+++...
T Consensus 122 ~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~~d~~~ 190 (255)
T 1whs_A 122 NRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGLIDDYH 190 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCccCHHH
Confidence 334444444444433 22 33456899999999999998777542 134899999999887543
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0021 Score=47.74 Aligned_cols=56 Identities=18% Similarity=0.173 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----------CCCcceEEEecc
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----------PRKLGGGAIFSG 167 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------p~~~~~~i~~~~ 167 (251)
+..+-++.+...++..... .+..+++|.|+|+|+.++..++... .+.++++++++-
T Consensus 52 S~~~G~~~~~~~i~~~~~~-CP~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGd 118 (254)
T 3hc7_A 52 SVEKGVAELILQIELKLDA-DPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGN 118 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CTTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHhh-CCCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeC
Confidence 4455566666666554322 2457999999999999998877552 235778887764
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.002 Score=48.73 Aligned_cols=40 Identities=25% Similarity=0.248 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
..+.+.+.+..+... .+..++.+.|||+||.+|..++...
T Consensus 118 l~~~~~~~l~~~~~~-~p~~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 118 VQNELVATVLDQFKQ-YPSYKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred HHHHHHHHHHHHHHH-CCCceEEEEeeCHHHHHHHHHHHHH
Confidence 344444444443321 1345799999999999999888765
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0038 Score=47.18 Aligned_cols=80 Identities=21% Similarity=0.218 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc----C----CCcceEEEeccCCCCcchhhhhhcccCCCC
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY----P----RKLGGGAIFSGWVPFNASLIDQFTSDAKKT 186 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 186 (251)
..+.+...++.+.+.. +..++.+.|||+||.+|..++... + ..+ .++.+++.-.....+.+.+... ..
T Consensus 119 ~~~~~~~~l~~~~~~~-~~~~i~vtGHSLGGalA~l~a~~~~~~~~~~~~~~v-~~~tFg~Prvgn~~fa~~~~~~--~~ 194 (269)
T 1lgy_A 119 VVNDYFPVVQEQLTAH-PTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNL-SIFTVGGPRVGNPTFAYYVEST--GI 194 (269)
T ss_dssp HHHHHHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTE-EEEEESCCCCBCHHHHHHHHHH--CC
T ss_pred HHHHHHHHHHHHHHHC-CCCeEEEeccChHHHHHHHHHHHHHhhccccCCCCe-EEEEecCCCcCCHHHHHHHHhc--CC
Confidence 3444445555443222 346899999999999999888765 2 123 4555555433333333332221 34
Q ss_pred CEEEEccCCCCc
Q 025550 187 PILWSHGMADRT 198 (251)
Q Consensus 187 p~l~~~g~~D~~ 198 (251)
.++-+.-.+|.+
T Consensus 195 ~~~rvv~~~D~V 206 (269)
T 1lgy_A 195 PFQRTVHKRDIV 206 (269)
T ss_dssp CEEEEEETTBSG
T ss_pred CEEEEEECCCee
Confidence 455555566643
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0069 Score=45.52 Aligned_cols=80 Identities=11% Similarity=0.120 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC---CCcceEEEeccCCCCcchhhhhhccc-----CCCCCE
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP---RKLGGGAIFSGWVPFNASLIDQFTSD-----AKKTPI 188 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~p~ 188 (251)
+.+.+.++.+.+. .+..++.+.|||+||.+|..++.... ..+. ++.+++.--....+.+.+... .....+
T Consensus 109 ~~~~~~l~~~~~~-~p~~~i~vtGHSLGGalA~l~a~~l~~~~~~v~-~~tFg~Prvgn~~fa~~~~~~~~~~~~~~~~~ 186 (261)
T 1uwc_A 109 DQVESLVKQQASQ-YPDYALTVTGHSLGASMAALTAAQLSATYDNVR-LYTFGEPRSGNQAFASYMNDAFQVSSPETTQY 186 (261)
T ss_dssp HHHHHHHHHHHHH-STTSEEEEEEETHHHHHHHHHHHHHHTTCSSEE-EEEESCCCCBCHHHHHHHHHHTTTTCTTTCSE
T ss_pred HHHHHHHHHHHHH-CCCceEEEEecCHHHHHHHHHHHHHhccCCCeE-EEEecCCCCcCHHHHHHHHHhccccccCCccE
Confidence 3444444444322 23568999999999999998877632 2354 555555433333333333221 114556
Q ss_pred EEEccCCCCc
Q 025550 189 LWSHGMADRT 198 (251)
Q Consensus 189 l~~~g~~D~~ 198 (251)
+-+.-.+|.+
T Consensus 187 ~rvv~~~D~V 196 (261)
T 1uwc_A 187 FRVTHSNDGI 196 (261)
T ss_dssp EEEEETTCSG
T ss_pred EEEEECCCcE
Confidence 6666677754
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.019 Score=42.96 Aligned_cols=78 Identities=18% Similarity=0.136 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEcc
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHG 193 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g 193 (251)
.+.+.++.+.+.. +..++.+.|||+||.+|..++.. .|.....++.+++.--....+.+.+... ...++=+.-
T Consensus 109 ~~~~~l~~~~~~~-p~~~i~vtGHSLGGalA~l~a~~l~~~~~~~~v~~~tFg~PrvGn~~fa~~~~~~--~~~~~Rvvn 185 (258)
T 3g7n_A 109 TIITEVKALIAKY-PDYTLEAVGHSLGGALTSIAHVALAQNFPDKSLVSNALNAFPIGNQAWADFGTAQ--AGTFNRGNN 185 (258)
T ss_dssp HHHHHHHHHHHHS-TTCEEEEEEETHHHHHHHHHHHHHHHHCTTSCEEEEEESCCCCBCHHHHHHHHHS--SSEEEEEEE
T ss_pred HHHHHHHHHHHhC-CCCeEEEeccCHHHHHHHHHHHHHHHhCCCCceeEEEecCCCCCCHHHHHHHHhc--CCCeEEEEe
Confidence 3344444443222 34689999999999999887765 3332223444554333333333333221 133444555
Q ss_pred CCCCc
Q 025550 194 MADRT 198 (251)
Q Consensus 194 ~~D~~ 198 (251)
..|.+
T Consensus 186 ~~D~V 190 (258)
T 3g7n_A 186 VLDGV 190 (258)
T ss_dssp TTCBG
T ss_pred CCCcc
Confidence 56643
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.002 Score=44.20 Aligned_cols=66 Identities=17% Similarity=0.102 Sum_probs=51.3
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc---------------C-----CeeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA---------------G-----ISCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~---------------~-----~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
...++++.+|+.|.+++....+.+.+.|.=. | ...++..+.|+||....+.++...+.|.
T Consensus 63 ~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~ 142 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQ 142 (153)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHH
T ss_pred cCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHH
Confidence 4689999999999999988777777666410 0 1478889999999998888888777777
Q ss_pred HhhcCC
Q 025550 244 TRMSCS 249 (251)
Q Consensus 244 ~~l~~~ 249 (251)
+++..+
T Consensus 143 ~fl~~~ 148 (153)
T 1whs_B 143 YFLQGK 148 (153)
T ss_dssp HHHHTC
T ss_pred HHHCCC
Confidence 777644
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.39 E-value=0.012 Score=41.85 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=59.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
+..+++|+|+|+|+.++..++...| ++++++++++-....... -.+ +....-.++.++-..|.+.....
T Consensus 95 P~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~~~~~--G~~-p~~~~~k~~~~C~~gD~vC~~g~---- 167 (197)
T 3qpa_A 95 PDATLIAGGYXQGAALAAASIEDLDSAIRDKIAGTVLFGYTKNLQNR--GRI-PNYPADRTKVFCNTGDLVCTGSL---- 167 (197)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTTTTTT--TSC-TTSCGGGEEEECCTTCGGGGTCC----
T ss_pred CCCcEEEEecccccHHHHHHHhcCCHhHHhheEEEEEeeCCccccCC--CCC-CCCCHhHeeeecCCcCCcCCCCC----
Confidence 5679999999999999988777655 568888887753322100 000 01113457778888887754210
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHH-HHHHHHHHHHhhcC
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEE-LRNLESWIKTRMSC 248 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~~ 248 (251)
..-..|...... .++..+|+.+.|..
T Consensus 168 ---------------~~~~aH~~Y~~~~~~~Aa~Fv~~~l~~ 194 (197)
T 3qpa_A 168 ---------------IVAAPHLAYGPDARGPAPEFLIEKVRA 194 (197)
T ss_dssp ---------------CCCGGGGCCHHHHHTHHHHHHHHHHHH
T ss_pred ---------------CCchhhhChhhcHHHHHHHHHHHHHHh
Confidence 011357654433 47888999888753
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.15 Score=38.84 Aligned_cols=42 Identities=24% Similarity=0.324 Sum_probs=32.5
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccCCCCc
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~~~~~ 172 (251)
....++.|.|-|+||..+..+|..- .-.++++++-.|+++..
T Consensus 141 ~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~~d~~ 186 (300)
T 4az3_A 141 YKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGLSSYE 186 (300)
T ss_dssp GTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCCSBHH
T ss_pred hcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCccCHH
Confidence 3467899999999999998887652 22388999888887643
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.011 Score=45.78 Aligned_cols=37 Identities=24% Similarity=0.181 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
+.+...++.+.+. .+..++.+.|||+||.+|..++..
T Consensus 120 ~~l~~~l~~~~~~-~p~~~i~vtGHSLGGAlA~L~a~~ 156 (319)
T 3ngm_A 120 AAATAAVAKARKA-NPSFKVVSVGHSLGGAVATLAGAN 156 (319)
T ss_dssp HHHHHHHHHHHHS-STTCEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-CCCCceEEeecCHHHHHHHHHHHH
Confidence 3444444444322 245689999999999999887765
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.023 Score=43.12 Aligned_cols=37 Identities=24% Similarity=0.143 Sum_probs=26.5
Q ss_pred CCcEEEEEeChhHHHHHHHHHh----cCCCcceEEEeccCC
Q 025550 133 PNNVFVCGFSQGGALTLASVLL----YPRKLGGGAIFSGWV 169 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~----~p~~~~~~i~~~~~~ 169 (251)
..++.+.|||+||.+|..++.. .|.....++.+++.-
T Consensus 137 ~~~l~vtGHSLGGalA~l~a~~l~~~~~~~~~~~~tfg~Pr 177 (279)
T 3uue_A 137 EKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPR 177 (279)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHHHHHSTTCCSEEEEESCCC
T ss_pred CceEEEcccCHHHHHHHHHHHHHHHhCCCCceEEEEecCCC
Confidence 4689999999999999987764 343344556565543
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.023 Score=46.72 Aligned_cols=65 Identities=11% Similarity=-0.023 Sum_probs=47.8
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHH---------------------------hc-C-----CeeEEEEeCCCCCCCC
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLE---------------------------QA-G-----ISCEFKAYPGLGHSIS 231 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~---------------------------~~-~-----~~~~~~~~~g~~H~~~ 231 (251)
..+|++.+|+.|.+++....+.+.+.|+ +. | ...++..+.++||...
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 4799999999999999776666555553 00 1 1267788899999998
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 025550 232 NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 232 ~~~~~~~~~~l~~~l~~~ 249 (251)
.+.++...+.|..+|.+.
T Consensus 452 ~dqP~~al~m~~~fl~~~ 469 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSNDV 469 (483)
T ss_dssp HHCHHHHHHHHHHHTTCC
T ss_pred chhHHHHHHHHHHHHCCc
Confidence 888888887777777643
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.069 Score=40.81 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--------cCCCcceEEEecc
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--------YPRKLGGGAIFSG 167 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--------~p~~~~~~i~~~~ 167 (251)
....+-+..+...+..... .....+++|+|+|+|+.++..++.. .++.++++++++-
T Consensus 110 ~S~~~G~~~~~~~i~~~~~-~CP~TkiVL~GYSQGA~V~~~~~~~i~~g~~~~~~~~V~aVvLfGd 174 (302)
T 3aja_A 110 DSRAEGMRTTVKAMTDMND-RCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIAD 174 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HCTTCEEEEEEETHHHHHHHHHHHHHHTTCSSSCGGGEEEEEEESC
T ss_pred ccHHHHHHHHHHHHHHHHh-hCCCCcEEEEeeCchHHHHHHHHHhccCCCCCCChHHEEEEEEEeC
Confidence 3455556666666665442 2346799999999999999877643 2356888888864
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.17 Score=40.70 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=47.5
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc------------------C---------CeeEEEEeCCCCCCCCHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA------------------G---------ISCEFKAYPGLGHSISNEELRN 237 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~------------------~---------~~~~~~~~~g~~H~~~~~~~~~ 237 (251)
..++++.+|+.|.+++....+.+.+.|+=. + ...++..+.++||....+.++.
T Consensus 327 girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~ 406 (421)
T 1cpy_A 327 DLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPEN 406 (421)
T ss_dssp TCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHHH
T ss_pred CCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHHH
Confidence 589999999999999976655555544210 0 1267788899999998777777
Q ss_pred HHHHHHHhhcCC
Q 025550 238 LESWIKTRMSCS 249 (251)
Q Consensus 238 ~~~~l~~~l~~~ 249 (251)
..+.|.+++..+
T Consensus 407 al~m~~~fl~g~ 418 (421)
T 1cpy_A 407 ALSMVNEWIHGG 418 (421)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhcCc
Confidence 777777777644
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=44.65 Aligned_cols=24 Identities=29% Similarity=0.282 Sum_probs=20.3
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
+..++.+.|||+||.+|..++...
T Consensus 152 p~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 152 PDYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred CCceEEEeccChHHHHHHHHHHHH
Confidence 356899999999999999887653
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0074 Score=41.46 Aligned_cols=67 Identities=18% Similarity=0.130 Sum_probs=50.7
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhcC-------------------------CeeEEEEeCCCCCCCCHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQAG-------------------------ISCEFKAYPGLGHSISNEELRNL 238 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~-------------------------~~~~~~~~~g~~H~~~~~~~~~~ 238 (251)
...++++.+|+.|.+++....+.+.+.|.-.+ ...++..+.|+||....+.++..
T Consensus 62 ~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~a 141 (155)
T 4az3_B 62 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 141 (155)
T ss_dssp CCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHHH
T ss_pred cCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHHH
Confidence 46789999999999988776666655553211 12567888899999998888888
Q ss_pred HHHHHHhhcCCC
Q 025550 239 ESWIKTRMSCSS 250 (251)
Q Consensus 239 ~~~l~~~l~~~~ 250 (251)
.+.|.++|..++
T Consensus 142 l~m~~~fl~g~p 153 (155)
T 4az3_B 142 FTMFSRFLNKQP 153 (155)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 888888887653
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.082 Score=39.70 Aligned_cols=40 Identities=15% Similarity=0.144 Sum_probs=26.8
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh----cC----CCcceEEEeccCCCCc
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLL----YP----RKLGGGAIFSGWVPFN 172 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~----~p----~~~~~~i~~~~~~~~~ 172 (251)
....++.|.|.| | ..+..+|.. +. -.++++++.+|+++..
T Consensus 147 ~~~~~~yi~GES-G-~yvP~la~~i~~~n~~~~~inLkGi~ign~~~d~~ 194 (270)
T 1gxs_A 147 YNYREFYIAGES-G-HFIPQLSQVVYRNRNNSPFINFQGLLVSSGLTNDH 194 (270)
T ss_dssp GTTSEEEEEEEC-T-THHHHHHHHHHHTTTTCTTCEEEEEEEESCCCBHH
T ss_pred hcCCCEEEEeCC-C-cchHHHHHHHHhccccccceeeeeEEEeCCccChh
Confidence 455689999999 5 444444432 21 2478999999988754
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.019 Score=41.07 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCCCCcchhhhhhcccCCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWVPFNASLIDQFTSDAKK 185 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 185 (251)
....++...+..... + .+..+++|.|+|+|+.++..++...| +.++++++++-....... -.+ +....
T Consensus 86 ~G~~~~~~~i~~~~~---~--CP~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~~~~~--g~~-p~~~~ 157 (201)
T 3dcn_A 86 AAINEARRLFTLANT---K--CPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFGYTKNLQNL--GRI-PNFET 157 (201)
T ss_dssp HHHHHHHHHHHHHHH---H--CTTSEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEETCTTTTTTT--TSC-TTSCG
T ss_pred HHHHHHHHHHHHHHH---h--CCCCcEEEEeecchhHHHHHHHhcCChhhhhheEEEEEeeCcccccCC--CCC-CCCCh
Confidence 344444444444333 2 35679999999999999988776554 457888887643321110 000 00113
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH-HHHHHHHHHHhh
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE-LRNLESWIKTRM 246 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l 246 (251)
-.++.++-..|.+..... ..-..|...... .++..+|+.+.|
T Consensus 158 ~k~~~~C~~gD~vC~~g~-------------------~~~~aH~~Y~~~~~~~Aa~Fv~~kl 200 (201)
T 3dcn_A 158 SKTEVYCDIADAVCYGTL-------------------FILPAHFLYQTDAAVAAPRFLQARI 200 (201)
T ss_dssp GGEEEECCTTCGGGGTCC-------------------CCCCSSCCCHHHHHTHHHHHHHTTC
T ss_pred hHeeeecCCcCCccCCCC-------------------CCccchhChhhchHHHHHHHHHHhc
Confidence 458888888888754210 011367655444 478889988766
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.025 Score=40.81 Aligned_cols=42 Identities=17% Similarity=0.349 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
...+-++.+...++.... ..+..+++|.|+|+|+.++..++.
T Consensus 60 S~~~G~~~~~~~i~~~~~-~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 60 SVAQGIAAVASAVNSFNS-QCPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-HSTTCEEEEEEETHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH-hCCCCcEEEEeeCchHHHHHHHHh
Confidence 445556666666665442 235679999999999999987764
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=95.58 E-value=0.025 Score=39.94 Aligned_cols=93 Identities=14% Similarity=0.139 Sum_probs=56.2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
+..+++|+|+|+|+.++..++...| +.++++++++-....... ..+ +....-.++.++-..|.+.....
T Consensus 91 P~tkivl~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGdP~~~~~~--g~~-p~~~~~k~~~~C~~gD~vC~~g~---- 163 (187)
T 3qpd_A 91 PDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIKGVVLFGYTRNAQER--GQI-ANFPKDKVKVYCAVGDLVCLGTL---- 163 (187)
T ss_dssp TTCEEEEEEETHHHHHHHHHHTTSCHHHHHHEEEEEEESCTTTTTTT--TSC-TTSCGGGEEEECCTTCGGGGTCC----
T ss_pred CCCcEEEEeeccccHHHHhhhhcCCHhhhhhEEEEEEeeCCccccCC--CCC-CCCchhheeeecCCcCCccCCCC----
Confidence 4679999999999999988776554 358888887643321110 000 11123467788888887764210
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
..-..|.......++..+|+.++|
T Consensus 164 ---------------~~~~aH~~Y~~~~~~Aa~Fv~~kl 187 (187)
T 3qpd_A 164 ---------------IVAPPHFSYLSDTGDASDFLLSQL 187 (187)
T ss_dssp ---------------CCCGGGGCGGGGHHHHHHHHHHHC
T ss_pred ---------------CCccchhccccCHHHHHHHHHHhC
Confidence 001256544333378888887764
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.035 Score=40.01 Aligned_cols=42 Identities=17% Similarity=0.263 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
...+-++.+...+..... ..+..+++|.|+|+|+.++..++.
T Consensus 60 S~~~G~~~~~~~i~~~~~-~CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 60 SVVNGTNAAAAAINNFHN-SCPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-HCTTSEEEEEEETHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHh-hCCCCcEEEEEeCchHHHHHHHHh
Confidence 445556666666665442 235679999999999999987764
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.033 Score=40.07 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--C----CCcceEEEecc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--P----RKLGGGAIFSG 167 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p----~~~~~~i~~~~ 167 (251)
.+.+..+...++.... ..+..+++|+|+|+|+.++..++... + +.++++++++-
T Consensus 57 ~~G~~~~~~~i~~~~~-~CP~tkivl~GYSQGA~V~~~~~~~lg~~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 57 AAGTADIIRRINSGLA-ANPNVCYILQGYSQGAAATVVALQQLGTSGAAFNAVKGVFLIGN 116 (205)
T ss_dssp HHHHHHHHHHHHHHHH-HCTTCEEEEEEETHHHHHHHHHHHHHCSSSHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHh-hCCCCcEEEEeeCchhHHHHHHHHhccCChhhhhhEEEEEEEeC
Confidence 3445555555554332 23567999999999999988876554 3 35888888873
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=94.80 E-value=0.005 Score=60.33 Aligned_cols=82 Identities=11% Similarity=0.081 Sum_probs=0.0
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.++++|+.++....|..+++.+. ..++.+.+|+.+ ...++.+.++
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l~---~~v~~lq~pg~~-----------------------------~~~~i~~la~ 2288 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKLS---IPTYGLQCTGAA-----------------------------PLDSIQSLAS 2288 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhhC---CcEEEEecCCCC-----------------------------CCCCHHHHHH
Confidence 34678899999988888888887663 555655555310 1122233333
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
.+.+.+... .+..++.++|||+||.+++.+|.+.
T Consensus 2289 ~~~~~i~~~----~p~gpy~L~G~S~Gg~lA~evA~~L 2322 (2512)
T 2vz8_A 2289 YYIECIRQV----QPEGPYRIAGYSYGACVAFEMCSQL 2322 (2512)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHh----CCCCCEEEEEECHhHHHHHHHHHHH
Confidence 333333311 1235799999999999999888653
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=93.37 E-value=0.057 Score=37.09 Aligned_cols=66 Identities=14% Similarity=0.076 Sum_probs=47.0
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc--------------C---------CeeEEEEeCCCCCCCCHHHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA--------------G---------ISCEFKAYPGLGHSISNEELRNLES 240 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~--------------~---------~~~~~~~~~g~~H~~~~~~~~~~~~ 240 (251)
...++++..|+.|.+++....+.+.+.|+=. + ...++..+.++||....+.++...+
T Consensus 65 ~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 65 AGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred cCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 3688999999999999876555555444210 1 1267888899999998777777777
Q ss_pred HHHHhhcCC
Q 025550 241 WIKTRMSCS 249 (251)
Q Consensus 241 ~l~~~l~~~ 249 (251)
.|++++..+
T Consensus 145 m~~~fl~g~ 153 (158)
T 1gxs_B 145 LFKQFLKGE 153 (158)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 777776543
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=93.28 E-value=0.059 Score=42.19 Aligned_cols=22 Identities=36% Similarity=0.549 Sum_probs=19.4
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 025550 133 PNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 133 ~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
..++.+.|||+||.+|..++..
T Consensus 165 ~~~i~vtGHSLGGAlA~l~a~~ 186 (346)
T 2ory_A 165 KAKICVTGHSKGGALSSTLALW 186 (346)
T ss_dssp CEEEEEEEETHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHH
Confidence 4689999999999999988765
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.15 E-value=0.03 Score=44.75 Aligned_cols=21 Identities=33% Similarity=0.475 Sum_probs=18.4
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 025550 134 NNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+|.+.|||+||.+|..++..
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~ 248 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATD 248 (419)
Confidence 479999999999999987754
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=90.21 E-value=0.26 Score=39.66 Aligned_cols=36 Identities=17% Similarity=0.073 Sum_probs=27.0
Q ss_pred CcEEEEEeChhHHHHHHHHHhc------CCCcceEEEeccCC
Q 025550 134 NNVFVCGFSQGGALTLASVLLY------PRKLGGGAIFSGWV 169 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~------p~~~~~~i~~~~~~ 169 (251)
.++.|.|.|+||..+..+|..- .-.++++++-.|+.
T Consensus 138 ~~~yi~GESY~G~y~p~~a~~i~~~n~~~inLkGi~IGNg~~ 179 (421)
T 1cpy_A 138 QDFHIAGASYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLT 179 (421)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHTTCSSCSSCCCEEEEESCCC
T ss_pred CCEEEEeecccccccHHHHHHHHhccccccceeeEEecCccc
Confidence 6899999999999998877542 12378887766644
|
| >2qub_A Extracellular lipase; beta roll, alpha/beta hydrolase, helical hairpin, hydrolase; 1.80A {Serratia marcescens} PDB: 2qua_A | Back alignment and structure |
|---|
Probab=89.09 E-value=1 Score=37.79 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=27.6
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcce
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~ 161 (251)
..++..+.|.|.|||+||.++-.+|....+.+.+
T Consensus 195 a~gl~g~dv~vsghslgg~~~n~~a~~~~~~~~g 228 (615)
T 2qub_A 195 AHGLSGEDVVVSGHSLGGLAVNSMAAQSDANWGG 228 (615)
T ss_dssp HTTCCGGGEEEEEETHHHHHHHHHHHHTTTSGGG
T ss_pred HcCCCCCcEEEeccccchhhhhHHHHhhcccccc
Confidence 6788889999999999999999888765554433
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=88.79 E-value=0.28 Score=40.28 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHH-Hc-CCCCCcEEEEEeChhHHHHHHHHHhc------------CCCcceEEEeccCC
Q 025550 112 LLKAVRNVHAMIDKEV-AA-GIDPNNVFVCGFSQGGALTLASVLLY------------PRKLGGGAIFSGWV 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~-~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~------------p~~~~~~i~~~~~~ 169 (251)
..+..+++..++.... +. .....++.|+|.|+||..+..+|..- +-.++++++-.|++
T Consensus 144 ~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~i~~~n~~~~~~~~~inLkGi~IGNg~~ 215 (483)
T 1ac5_A 144 LEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANAILNHNKFSKIDGDTYDLKALLIGNGWI 215 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHHHHHHHHHCCSTTSCCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHHHHHhcccccccCcccceeeeEecCCcc
Confidence 3444555555555443 22 23457899999999999998777431 12367887766644
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=87.84 E-value=0.47 Score=38.62 Aligned_cols=66 Identities=20% Similarity=0.176 Sum_probs=51.1
Q ss_pred CCCEEEEccCCCCcccchhcccchHHHHhc--------------------C-----CeeEEEEeCCCCCCCCHHHHHHHH
Q 025550 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQA--------------------G-----ISCEFKAYPGLGHSISNEELRNLE 239 (251)
Q Consensus 185 ~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~--------------------~-----~~~~~~~~~g~~H~~~~~~~~~~~ 239 (251)
..++++..|+.|.+++....+.+.+.|+-. | ...++..+.|+||....+.++...
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 689999999999999987766666666310 1 126677889999999888888888
Q ss_pred HHHHHhhcCCC
Q 025550 240 SWIKTRMSCSS 250 (251)
Q Consensus 240 ~~l~~~l~~~~ 250 (251)
+.|++++..++
T Consensus 441 ~m~~~fl~g~~ 451 (452)
T 1ivy_A 441 TMFSRFLNKQP 451 (452)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHhcCCC
Confidence 88888887553
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=86.03 E-value=0.24 Score=38.25 Aligned_cols=37 Identities=16% Similarity=0.068 Sum_probs=24.0
Q ss_pred ccEEEEEecCCCCCC----Cchh---hhhhhcCCCcceEEEEccCCC
Q 025550 39 RNFILWLHGLGDSGP----ANEP---IKTLFTSPEFKLTKWSFPSAP 78 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~----~~~~---~~~~~~~~g~~~~~~~~~~~~ 78 (251)
.|+||.+||.+++.. .|.. +.+.-.++|| ++.||...
T Consensus 221 ~~l~v~lHGc~~~~~~~g~~~~~~~~~~~~Ad~~~~---iv~yP~~~ 264 (318)
T 2d81_A 221 CSLHVALHGCLQSYSSIGSRFIQNTGYNKWADTNNM---IILYPQAI 264 (318)
T ss_dssp EEEEEEECCTTCSHHHHTTHHHHHSCHHHHHTTTTE---EEEECCBC
T ss_pred CCEEEEecCCCCCcchhhhhhhcccChHHHHHhCCe---EEEeCCCc
Confidence 789999999999885 4433 2333345566 55566543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 251 | ||||
| d1auoa_ | 218 | c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluor | 4e-31 | |
| d1fj2a_ | 229 | c.69.1.14 (A:) Acyl protein thioesterase 1 {Human | 4e-30 | |
| d2h1ia1 | 202 | c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cer | 5e-15 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 9e-15 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 8e-14 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 4e-11 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 7e-08 | |
| d2gzsa1 | 265 | c.69.1.38 (A:41-305) Enterobactin and salmochelin | 9e-06 | |
| d3c8da2 | 246 | c.69.1.2 (A:151-396) Enterochelin esterase, cataly | 2e-05 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 5e-05 | |
| d1jjfa_ | 255 | c.69.1.2 (A:) Feruloyl esterase domain of the cell | 6e-05 | |
| d1wb4a1 | 273 | c.69.1.2 (A:803-1075) Feruloyl esterase domain of | 7e-05 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 1e-04 | |
| d2hu7a2 | 260 | c.69.1.33 (A:322-581) Acylamino-acid-releasing enz | 0.001 | |
| d1vkha_ | 263 | c.69.1.32 (A:) Putative serine hydrolase Ydr428c { | 0.003 |
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 112 bits (280), Expect = 4e-31
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
A ++WLHGLG P+ T++ P AP PVT N G MPSW+DI
Sbjct: 13 ADACVIWLHGLGADRYDFMPVAEAL-QESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIK 71
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157
+ S +E L + + V +I+ + GID + +F+ GFSQGGA+ + + +
Sbjct: 72 AMSPARSISLEE--LEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQ 129
Query: 158 KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217
GG I + ++ ++ P L HG D V G++ L+ G++
Sbjct: 130 GPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVT 189
Query: 218 CEFKAYPGLGHSISNEELRNLESWIKTR 245
++ YP GH + +E+ ++ +W+ R
Sbjct: 190 VTWQEYPM-GHEVLPQEIHDIGAWLAAR 216
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (274), Expect = 4e-30
Identities = 73/212 (34%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
A +++LHGLGD+G S K + P AP PVT N MPSWFDI
Sbjct: 20 ATAAVIFLHGLGDTGHGWAEAFAGIRSSHIK---YICPHAPVRPVTLNMNVAMPSWFDII 76
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157
+ + S +DES + +A N+ A+ID+EV GI N + + GFSQGGAL+L + L +
Sbjct: 77 GL--SPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQ 134
Query: 158 KLGGGAIFSGWVPFNASLIDQFTSDAKK-TPILWSHGMADRTVLFEAGQAGPPFLEQ--A 214
KL G S W+P AS A + IL HG D V G L+
Sbjct: 135 KLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVN 194
Query: 215 GISCEFKAYPGLGHSISNEELRNLESWIKTRM 246
+ FK Y G+ HS +E+ +++ +I +
Sbjct: 195 PANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 226
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} Length = 202 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Score = 69.4 bits (168), Expect = 5e-15
Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 21/205 (10%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+L LHG G + P+ + V G V+ + +
Sbjct: 17 LLLLHGTGGNELDLLPLAEIV--------------DSEASVLSVRGNVLENGMPRFFRRL 62
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGI-DPNNVFVCGFSQGGALTLASVLLYPRKLG 160
DE L+ + ++ +D+ D NN+ G+S G + + + Y L
Sbjct: 63 AEGIF-DEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALK 121
Query: 161 GGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEF 220
G + VP ++ + + G D + LE A +
Sbjct: 122 GAVLHHPMVPRR----GMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM 177
Query: 221 KAYPGLGHSISNEELRNLESWIKTR 245
GH ++ E+ + W
Sbjct: 178 HWENR-GHQLTMGEVEKAKEWYDKA 201
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 68.9 bits (167), Expect = 9e-15
Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 22/206 (10%)
Query: 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIH 97
+R + LHG G P+ P + G +P
Sbjct: 22 SRECLFLLHGSGVDETTLVPLARRIA--------------PTATLVAARG-RIPQEDGFR 66
Query: 98 EIPVTASSPKDESSLLKAVRNVHAMIDKEVAA-GIDPNNVFVCGFSQGGALTLASVLLYP 156
+ ++ S+L A ++ G++ ++ G+S G L + +LL+P
Sbjct: 67 WFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHP 126
Query: 157 RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216
+ A+ + + A A L + G
Sbjct: 127 GIVRLAALLRPMPVLD-----HVPATDLAGIRTLIIAGAADETYGPFVPALVTLLSRHGA 181
Query: 217 SCEFKAYPGLGHSISNEELRNLESWI 242
+ + P GH I + + + W+
Sbjct: 182 EVDARIIPS-GHDIGDPDAAIVRQWL 206
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 65.9 bits (159), Expect = 8e-14
Identities = 36/217 (16%), Positives = 60/217 (27%), Gaps = 23/217 (10%)
Query: 29 SYSHEQNPMARNF--ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNY 86
SY H+ + LHG G P +
Sbjct: 5 SYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARL--------------LPQATILSPV 50
Query: 87 GAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGA 146
G V T D L +A + I V GFS G
Sbjct: 51 GDVSEHGAA-RFFRRTGEGVYDMVDLERATGKMADFIKAN-REHYQAGPVIGLGFSNGAN 108
Query: 147 LTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQA 206
+ ++ P + +PF + + +L + G D + +A
Sbjct: 109 ILANVLIEQPELFDAAVLMHPLIPFE----PKISPAKPTRRVLITAGERDPICPVQLTKA 164
Query: 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243
L+ G + E +PG GH I + E+ + ++
Sbjct: 165 LEESLKAQGGTVETVWHPG-GHEIRSGEIDAVRGFLA 200
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 59.0 bits (141), Expect = 4e-11
Identities = 31/220 (14%), Positives = 55/220 (25%), Gaps = 32/220 (14%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+L LHGL S + + F L + P +++ + +
Sbjct: 27 LLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVAL 86
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
A E A +F+ G S G + + R G
Sbjct: 87 G--------------FKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGV 132
Query: 162 GAI----------------FSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQ 205
A G + + P+L HG D V +
Sbjct: 133 LAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARME 192
Query: 206 AGPPFLEQAGIS--CEFKAYPGLGHSISNEELRNLESWIK 243
L G GH+++ R ++++
Sbjct: 193 KTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLE 232
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 50.1 bits (119), Expect = 7e-08
Identities = 19/129 (14%), Positives = 35/129 (27%), Gaps = 30/129 (23%)
Query: 130 GIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFT--------- 180
++PN+V V G + GG + + Y G P++ + +T
Sbjct: 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPS 66
Query: 181 -------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA--GISCE 219
++ + I G +D TV L +
Sbjct: 67 ITTPTANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVS 126
Query: 220 FKAYPGLGH 228
+ G H
Sbjct: 127 YVTTTGAVH 135
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Score = 43.4 bits (101), Expect = 9e-06
Identities = 25/205 (12%), Positives = 53/205 (25%), Gaps = 19/205 (9%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+ L G ++ + + + + + + +
Sbjct: 46 LYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDL 105
Query: 102 TASSPKDESSLLKAVRNVHA-----MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP 156
+ +S R + +++ + ID + G S GG L S L
Sbjct: 106 HSGRFSRKSGGSNNFRQLLETRIAPKVEQGL--NIDRQRRGLWGHSYGGLFVLDSWLSSS 163
Query: 157 RKLGGGAI----FSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPP--- 209
+ G+ + + + G A + E G
Sbjct: 164 YFRSYYSASPSLGRGYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKI 223
Query: 210 -----FLEQAGISCEFKAYPGLGHS 229
L+ G++ F +P LGH
Sbjct: 224 HTTLTILKDKGVNAVFWDFPNLGHG 248
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} Length = 246 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Score = 42.2 bits (98), Expect = 2e-05
Identities = 32/229 (13%), Positives = 63/229 (27%), Gaps = 38/229 (16%)
Query: 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLG--DSGPANEPIKTLFTSPEFKLT 70
L + +F + E+ P+ + L G S P + +L +
Sbjct: 24 RLKNSRRVWIFTTGD--VTAEERPL----AVLLDGEFWAQSMPVWPVLTSLTHRQQLPPA 77
Query: 71 KWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG 130
+ A + + ++ + + ++
Sbjct: 78 VYVLIDAIDTTHRAHELPCNADFWLAV------------------QQELLPLVKVIAPFS 119
Query: 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG----------WVPFNASLIDQFT 180
+ V G S GG L + L +P + G SG +
Sbjct: 120 DRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGE 179
Query: 181 SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229
A+ I+ G+ + ++ A QA L S ++ G GH
Sbjct: 180 VSAEGLRIVLEAGIREP-MIMRANQALYAQLHPIKESIFWRQVDG-GHD 226
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 41.3 bits (95), Expect = 5e-05
Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 3/59 (5%)
Query: 185 KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243
K P+L S G+ D+ A E K Y GH ++ K
Sbjct: 258 KVPVLMSIGLIDKVTPPSTVFA---AYNHLETKKELKVYRYFGHEYIPAFQTEKLAFFK 313
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Score = 40.8 bits (94), Expect = 6e-05
Identities = 27/190 (14%), Positives = 49/190 (25%), Gaps = 14/190 (7%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+ LHG+G S ++ +N + +
Sbjct: 55 LYLLHGIGGSEN------------DWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAG 102
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ E+ + ++ I+ + D + + G S GG + L K
Sbjct: 103 PGIADGYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAY 162
Query: 162 GAIFSGWVPF--NASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCE 219
S N L A++ L L GQ + I+
Sbjct: 163 IGPISAAPNTYPNERLFPDGGKAAREKLKLLFIACGTNDSLIGFGQRVHEYCVANNINHV 222
Query: 220 FKAYPGLGHS 229
+ G GH
Sbjct: 223 YWLIQGGGHD 232
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Score = 40.9 bits (94), Expect = 7e-05
Identities = 22/206 (10%), Positives = 43/206 (20%), Gaps = 24/206 (11%)
Query: 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPV 101
+HG G++ + G + E
Sbjct: 58 FYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQ 117
Query: 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161
+ + +A + GF+ GG T ++ +
Sbjct: 118 NVIPFVESK------YSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAY 171
Query: 162 GAIFSGWVPFNASLIDQFTSDA--------KKTPILWSHGMADRTVLFEAGQAGPPFLEQ 213
SG + S D+ S A K + + ++
Sbjct: 172 FMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYANMNPQIEAMKA 231
Query: 214 ----------AGISCEFKAYPGLGHS 229
+ + F PG H
Sbjct: 232 LPHFDYTSDFSKGNFYFLVAPGATHW 257
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 40.1 bits (92), Expect = 1e-04
Identities = 20/127 (15%), Positives = 35/127 (27%), Gaps = 7/127 (5%)
Query: 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF 179
+ + K+ A + + F+C F + L + F
Sbjct: 196 VSALSKKAKALL-CDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDG 254
Query: 180 TSDAK--KTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNE-ELR 236
+ A K P L+S G+ D A E + YP H +
Sbjct: 255 VNFAARAKIPALFSVGLMDNICPPSTVFA---AYNYYAGPKEIRIYPYNNHEGGGSFQAV 311
Query: 237 NLESWIK 243
++K
Sbjct: 312 EQVKFLK 318
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Score = 37.2 bits (84), Expect = 0.001
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Query: 182 DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE-----LR 236
D K P+ H D + L G + E P GH+I+ E L
Sbjct: 189 DRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHIIPDAGHAINTMEDAVKILL 248
Query: 237 NLESWIKTRM 246
++ T+
Sbjct: 249 PAVFFLATQR 258
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 36.0 bits (81), Expect = 0.003
Identities = 7/73 (9%), Positives = 17/73 (23%), Gaps = 2/73 (2%)
Query: 168 WVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLG 227
P + + H +D + L+ +S +
Sbjct: 185 EEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGL 244
Query: 228 HS--ISNEELRNL 238
H+ N ++
Sbjct: 245 HNDVYKNGKVAKY 257
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 251 | |||
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 100.0 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.97 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.96 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.96 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.95 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.94 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.94 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.94 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.94 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.94 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.93 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.93 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.93 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.93 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.92 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.92 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.92 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.92 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.92 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.91 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.91 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.91 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.91 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.91 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.91 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.91 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.9 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.9 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.9 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.9 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.9 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.9 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.9 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.9 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.9 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.9 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.89 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.89 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.88 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.87 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.87 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.87 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.87 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.86 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.85 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.85 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.85 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.83 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.83 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.82 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.82 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.82 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.81 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.81 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.8 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.78 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.75 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.75 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.74 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.71 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.7 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.69 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.69 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.67 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.64 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.64 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.61 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.59 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.57 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.57 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.55 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.52 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.47 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.46 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.45 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.45 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.43 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.18 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 99.1 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 99.08 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.87 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 98.81 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.76 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.69 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.67 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.67 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.66 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.65 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.65 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.63 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.53 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.32 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.26 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.12 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.96 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 97.88 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.43 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 96.63 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.62 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.58 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.5 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.4 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.38 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 94.86 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 94.74 |
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-33 Score=208.16 Aligned_cols=209 Identities=34% Similarity=0.546 Sum_probs=168.9
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
..+..++|||+||+|++..+|..+...+...++.+ .+|.+|..+.....+...+.||+.... ......+...+.+
T Consensus 17 ~~~~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~---v~p~Ap~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~i~~ 91 (229)
T d1fj2a_ 17 ARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKY---ICPHAPVRPVTLNMNVAMPSWFDIIGL--SPDSQEDESGIKQ 91 (229)
T ss_dssp SSCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEE---EECCCCEEEEGGGTTEEEECSSCBCCC--STTCCBCHHHHHH
T ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEE---EeCCCCCCccccCCCcccccccccccc--cccchhhhHHHHH
Confidence 44566899999999999988888777776666644 455566555555556667788876543 2333456677888
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-hcccCCCCCEEEEcc
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ-FTSDAKKTPILWSHG 193 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~p~l~~~g 193 (251)
+.+.+..+++...+.+++.+||+++|+|+||.+++.++.++|+.++++++++|+++......+. ......++|++++||
T Consensus 92 ~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~~~~~~~~~~~~~~Pvli~hG 171 (229)
T d1fj2a_ 92 AAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHG 171 (229)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSCSSCCCSTTTTCCEEEEEE
T ss_pred HHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCccccccccccccccccccccccccccCceeEEEc
Confidence 8888888888766778899999999999999999999999999999999999998765544332 233346799999999
Q ss_pred CCCCcccchhcccchHHHHhc--CCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 194 MADRTVLFEAGQAGPPFLEQA--GISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 194 ~~D~~~~~~~~~~~~~~l~~~--~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
++|.++|.+.++..++.|++. +.++++++|+|++|.+..++++++.+||.++|..
T Consensus 172 ~~D~~vp~~~~~~~~~~L~~~~~~~~v~~~~~~g~gH~i~~~~~~~~~~wL~~~Lp~ 228 (229)
T d1fj2a_ 172 DCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPP 228 (229)
T ss_dssp TTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHHHSCC
T ss_pred CCCCeeCHHHHHHHHHHHHhcCCCCceEEEEeCCCCCccCHHHHHHHHHHHHhHCcC
Confidence 999999999999999999874 6789999999999999999999999999999863
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.97 E-value=3.3e-31 Score=195.33 Aligned_cols=209 Identities=28% Similarity=0.591 Sum_probs=166.3
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
|.+++.++||++||+|++..++..+++.+. ..+..+.+.+|.+|........+...+.|++.... ......+.+++.
T Consensus 9 p~~~~~~~Vi~lHG~G~~~~~~~~~~~~l~-~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~ 85 (218)
T d1auoa_ 9 PAKPADACVIWLHGLGADRYDFMPVAEALQ-ESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAM--SPARSISLEELE 85 (218)
T ss_dssp CSSCCSEEEEEECCTTCCTTTTHHHHHHHH-TTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEEC--SSSCEECHHHHH
T ss_pred CCCCCCeEEEEEcCCCCChhhHHHHHHHHH-HhCCCcEEEccCCCccccccCCCcccCcccccccc--cccccchHHHHH
Confidence 444567899999999999999999888776 34566678888888766666667777889876543 112233556677
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.....+.++++...+.+++.++++++|+|+||.+++.+++. .+..+++++.++|+.+....... ......+.|++++|
T Consensus 86 ~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~-~~~~~~~~pvl~~h 164 (218)
T d1auoa_ 86 VSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELE-LSASQQRIPALCLH 164 (218)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCTTCC-CCHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCcccccccc-cchhccCCCEEEEe
Confidence 77777777777666778999999999999999999988764 56679999999998765433221 11223578999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
|++|.++|.+.++++++.|++.|.++++++|+ ++|....++++++.+||.++|.
T Consensus 165 G~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~-~gH~i~~~~~~~i~~wl~~~lg 218 (218)
T d1auoa_ 165 GQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218 (218)
T ss_dssp ETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSSSCCHHHHHHHHHHHHHHHC
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCEEEEEEC-CCCccCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999998 5999999999999999999874
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.96 E-value=3.1e-28 Score=177.31 Aligned_cols=193 Identities=18% Similarity=0.297 Sum_probs=152.4
Q ss_pred CCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 34 QNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
..++++|+||++||+|++..+|..+++.+. .++.++.++.+..+. ....|..... ....+..+..
T Consensus 9 ~~~~~~P~vi~lHG~g~~~~~~~~~~~~l~-~~~~vv~p~~~~~~~---------~~~~~~~~~~-----~~~~~~~~~~ 73 (202)
T d2h1ia1 9 GKDTSKPVLLLLHGTGGNELDLLPLAEIVD-SEASVLSVRGNVLEN---------GMPRFFRRLA-----EGIFDEEDLI 73 (202)
T ss_dssp CSCTTSCEEEEECCTTCCTTTTHHHHHHHH-TTSCEEEECCSEEET---------TEEESSCEEE-----TTEECHHHHH
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHhc-cCCceeeecccccCC---------CCccccccCC-----CCCCchHHHH
Confidence 345678999999999999999999999887 477777665432211 1111111111 1123456667
Q ss_pred HHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 114 KAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 114 ~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
...+.+...+..+. +..++.++++++|+|+||.+++.++..+|+.+++++.++|..+..... .......|+++++
T Consensus 74 ~~~~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 149 (202)
T d2h1ia1 74 FRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQ----LANLAGKSVFIAA 149 (202)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSSCC----CCCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCccccc----ccccccchhhccc
Confidence 77777777777766 778899999999999999999999999999999999999987644322 2234678999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|++|+++|++.++.+.+.|++.|.+++++.||+ +|.+..+.++++.+||.+.+
T Consensus 150 G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~g-gH~~~~~~~~~~~~wl~k~f 202 (202)
T d2h1ia1 150 GTNDPICSSAESEELKVLLENANANVTMHWENR-GHQLTMGEVEKAKEWYDKAF 202 (202)
T ss_dssp ESSCSSSCHHHHHHHHHHHHTTTCEEEEEEESS-TTSCCHHHHHHHHHHHHHHC
T ss_pred ccCCCccCHHHHHHHHHHHHHCCCCEEEEEECC-CCcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999997 89999999999999999864
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.96 E-value=6.1e-28 Score=176.53 Aligned_cols=190 Identities=18% Similarity=0.252 Sum_probs=146.6
Q ss_pred CCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 33 EQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 33 ~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.++.+++|+||++||+|++..+|..+++.+.. ++.++.++.+.. . .....|+..... ...+..+.
T Consensus 17 ~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~~-~~~~l~~~~~~~------~---~~~~~~~~~~~~-----~~~~~~~~ 81 (209)
T d3b5ea1 17 GAGKESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIP------Q---EDGFRWFERIDP-----TRFEQKSI 81 (209)
T ss_dssp STTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEE------E---TTEEESSCEEET-----TEECHHHH
T ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHhcc-CcEEEeeccCcC------c---ccCccccccCCc-----cccchhhH
Confidence 35667789999999999999999999998874 566666654311 0 112233322211 12345566
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEE
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWS 191 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~ 191 (251)
...+..+.+.++.+. +.+++.++++++|||+||.+++.++.++|+.++++++++|........ .....++|++++
T Consensus 82 ~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~~~~----~~~~~~~p~~~~ 157 (209)
T d3b5ea1 82 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDHVP----ATDLAGIRTLII 157 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSSCC----CCCCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCcccccccc----ccccccchheee
Confidence 666677777776665 778999999999999999999999999999999999999976543321 123467999999
Q ss_pred ccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHH
Q 025550 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIK 243 (251)
Q Consensus 192 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 243 (251)
+|++|++++ +.++++.+.|++.|.++++++++| +|.+..++++.+.+||.
T Consensus 158 ~G~~D~~~~-~~~~~~~~~l~~~G~~v~~~~~~g-gH~i~~~~~~~~~~wl~ 207 (209)
T d3b5ea1 158 AGAADETYG-PFVPALVTLLSRHGAEVDARIIPS-GHDIGDPDAAIVRQWLA 207 (209)
T ss_dssp EETTCTTTG-GGHHHHHHHHHHTTCEEEEEEESC-CSCCCHHHHHHHHHHHH
T ss_pred eccCCCccC-HHHHHHHHHHHHCCCCeEEEEECC-CCCCCHHHHHHHHHHhC
Confidence 999999987 567788999999999999999998 89999999999999985
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=2.5e-27 Score=172.52 Aligned_cols=192 Identities=18% Similarity=0.255 Sum_probs=148.8
Q ss_pred CCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 33 EQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 33 ~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
++..+..|+||++||+|++..+|..+++.+. .++.++.++.+..+. +.. .|+.. ......+..++
T Consensus 11 ~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l~-~~~~v~~~~~~~~~~-------~~~--~~~~~-----~~~~~~~~~~~ 75 (203)
T d2r8ba1 11 RAGVAGAPLFVLLHGTGGDENQFFDFGARLL-PQATILSPVGDVSEH-------GAA--RFFRR-----TGEGVYDMVDL 75 (203)
T ss_dssp ECCCTTSCEEEEECCTTCCHHHHHHHHHHHS-TTSEEEEECCSEEET-------TEE--ESSCB-----CGGGCBCHHHH
T ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHhc-cCCeEEEeccccccc-------ccc--ccccc-----cCccccchhHH
Confidence 3566778999999999999888888888776 456666555432111 111 11100 01123456677
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
...++.+...++... ..++.++++++|+|+||.+++.++..+|+.+.+++++++..+..... .......|++++|
T Consensus 76 ~~~~~~~~~~l~~~~-~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~h 150 (203)
T d2r8ba1 76 ERATGKMADFIKANR-EHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKI----SPAKPTRRVLITA 150 (203)
T ss_dssp HHHHHHHHHHHHHHH-HHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCCCC----CCCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhh-hcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccccc----ccccccchhhccc
Confidence 777888777776542 34577899999999999999999999999999999999987654332 2344678999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
|++|.++|.++++++.+.|++.|.+++++++++ ||.+..++++++.+||.++
T Consensus 151 G~~D~~vp~~~~~~~~~~L~~~g~~v~~~~~~g-gH~~~~~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 151 GERDPICPVQLTKALEESLKAQGGTVETVWHPG-GHEIRSGEIDAVRGFLAAY 202 (203)
T ss_dssp ETTCTTSCHHHHHHHHHHHHHHSSEEEEEEESS-CSSCCHHHHHHHHHHHGGG
T ss_pred cCCCCcccHHHHHHHHHHHHHCCCCEEEEEECC-CCcCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999997 8999999999999999875
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=4.1e-27 Score=175.43 Aligned_cols=194 Identities=16% Similarity=0.080 Sum_probs=139.3
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH---
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL--- 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~--- 112 (251)
++++|+||++||++++...|..+++.|++.||.++.+|+|+++.+......... .......
T Consensus 21 ~~~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~~~~----------------~~~~~~~~~~ 84 (238)
T d1ufoa_ 21 EAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKS----------------PRYVEEVYRV 84 (238)
T ss_dssp SSCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTS----------------TTHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCccccccccc----------------chhhhhhhhh
Confidence 346799999999999999999999999999999999999987664322111000 1111222
Q ss_pred -HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh--------------
Q 025550 113 -LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-------------- 177 (251)
Q Consensus 113 -~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-------------- 177 (251)
...++.+..++.. ...++.++++++|+|+||.+++.++..+|+ +++++.+.+..........
T Consensus 85 ~~~~~~~~~~~~~~--~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (238)
T d1ufoa_ 85 ALGFKEEARRVAEE--AERRFGLPLFLAGGSLGAFVAHLLLAEGFR-PRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQA 161 (238)
T ss_dssp HHHHHHHHHHHHHH--HHHHHCCCEEEEEETHHHHHHHHHHHTTCC-CSCEEEESCCSSCCCCCTTCCCCCHHHHHHHHS
T ss_pred HHhHHHHHHHHhhh--ccccCCceEEEEEecccHHHHHHHHhcCcc-hhheeeeeeeccccccccccccccccccchhhh
Confidence 1222222222221 233467899999999999999999999986 5555555553322111000
Q ss_pred ---hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe--eEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 178 ---QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS--CEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 178 ---~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~--~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.......++|+++++|++|.+++.+.++++++.+++.+.+ ++++.++|.||.+..+..+.+.+||.++|..
T Consensus 162 ~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~~ 237 (238)
T d1ufoa_ 162 PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred hhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhcC
Confidence 0111236789999999999999999999999999988754 7889999999999999999999999999864
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.94 E-value=3.8e-26 Score=172.52 Aligned_cols=213 Identities=15% Similarity=0.137 Sum_probs=150.4
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCC--CCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLG--DSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGA 88 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 88 (251)
..-+.++..+..|+..|. ....+.|+||++||++ .....|..+++.|+++||.++.+|+++++...
T Consensus 16 ~~~s~dG~~i~~~l~~p~-----~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g------- 83 (260)
T d2hu7a2 16 WVESFDGSRVPTYVLESG-----RAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYG------- 83 (260)
T ss_dssp EEECTTSCEEEEEEEEET-----TSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSC-------
T ss_pred EEECCCCCEEEEEEEeCC-----CCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccc-------
Confidence 344566778888777632 2345679999999843 44566777888899999999999999765432
Q ss_pred cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 89 VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 89 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..|...... .....+ ++++.+.++.+.+ ..+.+++.++|+|+||.+++.++..+|+.+++++..+|.
T Consensus 84 --~~~~~~~~~------~~~~~~----~~D~~~~~~~l~~-~~~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~ 150 (260)
T d2hu7a2 84 --EEWRLKIIG------DPCGGE----LEDVSAAARWARE-SGLASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASV 150 (260)
T ss_dssp --HHHHHTTTT------CTTTHH----HHHHHHHHHHHHH-TTCEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCC
T ss_pred --ccccccccc------ccchhh----hhhhccccccccc-ccccceeeccccccccccccchhccCCcccccccccccc
Confidence 112111100 111111 2222223332222 336789999999999999999999999999999998886
Q ss_pred CCCcchhh---------------------h----hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEe
Q 025550 169 VPFNASLI---------------------D----QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAY 223 (251)
Q Consensus 169 ~~~~~~~~---------------------~----~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~ 223 (251)
........ . .....+.++|+|++||++|..+|++++..+++.|++.+.++++++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~ 230 (260)
T d2hu7a2 151 VDWEEMYELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGKTFEAHII 230 (260)
T ss_dssp CCHHHHHHTCCHHHHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhhhhhcccccccccccccccccccccccccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCCCeEEEEE
Confidence 54321100 0 0011357889999999999999999999999999999999999999
Q ss_pred CCCCCCCCH-----HHHHHHHHHHHHhhcC
Q 025550 224 PGLGHSISN-----EELRNLESWIKTRMSC 248 (251)
Q Consensus 224 ~g~~H~~~~-----~~~~~~~~~l~~~l~~ 248 (251)
||++|.+.. +.++.+.+||.++|++
T Consensus 231 ~g~~H~~~~~e~~~~~~~~~~~fl~~hl~~ 260 (260)
T d2hu7a2 231 PDAGHAINTMEDAVKILLPAVFFLATQRER 260 (260)
T ss_dssp TTCCSSCCBHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCCChHhHHHHHHHHHHHHHHHhcC
Confidence 999998863 2356788999999863
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=7.7e-26 Score=170.62 Aligned_cols=221 Identities=13% Similarity=0.102 Sum_probs=149.8
Q ss_pred ceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC-----CCCchhhhhhhcCCCcceEEEEccCCCCC
Q 025550 6 PIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS-----GPANEPIKTLFTSPEFKLTKWSFPSAPNN 80 (251)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 80 (251)
|......+..++..+..+++.|+.+. ++++.|+||++||+++. ...+......++.+||.++.+|+++.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~~---~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~ 78 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHFD---KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQ 78 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCC---TTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSS
T ss_pred CceeEEEEEeCCcEEEEEEEECCCcC---CCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCc
Confidence 34445566778888888887765553 56788999999995221 12222244467889999999999975321
Q ss_pred CcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcc
Q 025550 81 PVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG 160 (251)
Q Consensus 81 ~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 160 (251)
...|.+... ......+..+....+..+.+ +..++.++++++|+|+||.+++.++..+|+.+.
T Consensus 79 ---------~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~ 140 (258)
T d2bgra2 79 ---------GDKIMHAIN------RRLGTFEVEDQIEAARQFSK---MGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFK 140 (258)
T ss_dssp ---------CHHHHGGGT------TCTTSHHHHHHHHHHHHHTT---SSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCS
T ss_pred ---------chHHHHhhh------hhhhhHHHHHHHHHHHHhhh---hcccccccccccCcchhhcccccccccCCCcce
Confidence 112211111 01122233333333333222 566788899999999999999999999999888
Q ss_pred eEEEeccCCCCcchh-------------------hhh---h-cccC-CCCCEEEEccCCCCcccchhcccchHHHHhcCC
Q 025550 161 GGAIFSGWVPFNASL-------------------IDQ---F-TSDA-KKTPILWSHGMADRTVLFEAGQAGPPFLEQAGI 216 (251)
Q Consensus 161 ~~i~~~~~~~~~~~~-------------------~~~---~-~~~~-~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~ 216 (251)
+++..++........ ... . ...+ .++|++++||++|..+|++++++++++|++.|.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~ 220 (258)
T d2bgra2 141 CGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGV 220 (258)
T ss_dssp EEEEESCCCCGGGSBHHHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTC
T ss_pred EEEEeecccccccccccccchhcccccchhhHHHhhcccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCC
Confidence 888777633211100 000 0 0112 348999999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCCCHH-----HHHHHHHHHHHhhc
Q 025550 217 SCEFKAYPGLGHSISNE-----ELRNLESWIKTRMS 247 (251)
Q Consensus 217 ~~~~~~~~g~~H~~~~~-----~~~~~~~~l~~~l~ 247 (251)
++++++|||++|.+... ..+.+.+||+++|.
T Consensus 221 ~~~~~~~~g~~H~~~~~~~~~~~~~~i~~fl~~~l~ 256 (258)
T d2bgra2 221 DFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 256 (258)
T ss_dssp CCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCCCCCccHHHHHHHHHHHHHHHhc
Confidence 99999999999987532 25778889988875
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.94 E-value=1.3e-25 Score=176.89 Aligned_cols=205 Identities=14% Similarity=0.155 Sum_probs=146.9
Q ss_pred eEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCC
Q 025550 9 LFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGA 88 (251)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 88 (251)
....+.-++..+..|+..| +...+.|+||++||++++...+..+++.|.++||.++.+|+|+++.+...
T Consensus 107 e~v~ip~dg~~l~g~l~~P------~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~----- 175 (360)
T d2jbwa1 107 ERHELVVDGIPMPVYVRIP------EGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEY----- 175 (360)
T ss_dssp EEEEEEETTEEEEEEEECC------SSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTT-----
T ss_pred EEeecCcCCcccceEEEec------CCCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCcc-----
Confidence 3344556788888887763 23457899999999999998888899999999999999999987543110
Q ss_pred cCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 89 VMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 89 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
.....+....+..+.+++.. ...++.++|+|+|+|+||.+++.+|...| +++++|+.++.
T Consensus 176 -----------------~~~~~~~~~~~~~v~d~l~~--~~~vd~~rI~l~G~S~GG~~Al~~A~~~p-ri~a~V~~~~~ 235 (360)
T d2jbwa1 176 -----------------KRIAGDYEKYTSAVVDLLTK--LEAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWGGF 235 (360)
T ss_dssp -----------------CCSCSCHHHHHHHHHHHHHH--CTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCC
T ss_pred -----------------ccccccHHHHHHHHHHHHHh--cccccccceeehhhhcccHHHHHHhhcCC-CcceEEEEccc
Confidence 00111222223333333332 34567889999999999999999999888 59999999886
Q ss_pred CCCcchhhh--------------------------hh----cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 169 VPFNASLID--------------------------QF----TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 169 ~~~~~~~~~--------------------------~~----~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
......... .+ ...++++|+|+++|++|. +|.+.++.+++.+... ++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~--~~ 312 (360)
T d2jbwa1 236 SDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE--HL 312 (360)
T ss_dssp SCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG--GE
T ss_pred ccHHHHhhhhhhhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCC--Ce
Confidence 654221000 00 023588999999999998 5888887777776543 57
Q ss_pred EEEEeCCCCCCCC---HHHHHHHHHHHHHhhc
Q 025550 219 EFKAYPGLGHSIS---NEELRNLESWIKTRMS 247 (251)
Q Consensus 219 ~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~ 247 (251)
+++++++++|... .+....+.+||.++|.
T Consensus 313 ~l~~~~~g~H~~~~~~~~~~~~i~dWl~~~L~ 344 (360)
T d2jbwa1 313 NLVVEKDGDHCCHNLGIRPRLEMADWLYDVLV 344 (360)
T ss_dssp EEEEETTCCGGGGGGTTHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCcCCCcChHHHHHHHHHHHHHHhc
Confidence 8888999999643 3456778999999985
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.6e-26 Score=174.47 Aligned_cols=221 Identities=15% Similarity=0.143 Sum_probs=146.0
Q ss_pred ceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC---CCCchh--hhhhhcCCCcceEEEEccCCCCC
Q 025550 6 PIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS---GPANEP--IKTLFTSPEFKLTKWSFPSAPNN 80 (251)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~---~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~ 80 (251)
|.+....+..++..+..++..|+.+. .+++.|+||++||+++. ...|.. ....++++||.++.+|+++.+..
T Consensus 1 p~v~~~~i~~dg~~l~~~l~~P~~~~---~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~ 77 (258)
T d1xfda2 1 PKVEYRDIEIDDYNLPMQILKPATFT---DTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQ 77 (258)
T ss_dssp CBCCBCCEEETTEEECCBEEBCSSCC---SSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSS
T ss_pred CceEEEEEeeCCeEEEEEEEECCCcC---CCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEecccccccc
Confidence 34455667778888877766654432 45678999999996322 122322 34468889999999999864321
Q ss_pred CcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---
Q 025550 81 PVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR--- 157 (251)
Q Consensus 81 ~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--- 157 (251)
| ..|..... ......++.+..+.+..+++ +..+|.+||+++|+|+||.+++.++...++
T Consensus 78 ------g---~~~~~~~~------~~~g~~~~~d~~~~i~~l~~---~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~ 139 (258)
T d1xfda2 78 ------G---TKLLHEVR------RRLGLLEEKDQMEAVRTMLK---EQYIDRTRVAVFGKDYGGYLSTYILPAKGENQG 139 (258)
T ss_dssp ------H---HHHHHTTT------TCTTTHHHHHHHHHHHHHHS---SSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTC
T ss_pred ------c---hhHhhhhh------ccchhHHHHHHHHhhhhhcc---cccccccceeccccCchHHHHHHHHhcCCcccc
Confidence 1 12211110 01122333333443333333 667889999999999999999988777654
Q ss_pred -CcceEEEeccCCCCcchh-----------------hhhh-----cccCCCCCEEEEccCCCCcccchhcccchHHHHhc
Q 025550 158 -KLGGGAIFSGWVPFNASL-----------------IDQF-----TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA 214 (251)
Q Consensus 158 -~~~~~i~~~~~~~~~~~~-----------------~~~~-----~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~ 214 (251)
.++....+.+........ .... .....++|+|+++|+.|..++++++..+.+.+++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~ 219 (258)
T d1xfda2 140 QTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRG 219 (258)
T ss_dssp CCCSEEEEESCCCCTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHT
T ss_pred eeeeeeeccccceeeeccccccccccccccccchHHhhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHC
Confidence 355556555533211100 0000 01124789999999999999999999999999999
Q ss_pred CCeeEEEEeCCCCCCCCHH-----HHHHHHHHHHHhhc
Q 025550 215 GISCEFKAYPGLGHSISNE-----ELRNLESWIKTRMS 247 (251)
Q Consensus 215 ~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~~~l~ 247 (251)
+.+++++++|+.+|.+... ..+.+.+||.+.|+
T Consensus 220 ~~~~~~~~~p~~~H~~~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 220 KANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp TCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CCCEEEEEECCCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999999999987532 35778889888775
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.94 E-value=2.4e-25 Score=170.62 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=136.5
Q ss_pred CCCccEEEEEecCCCCCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
++..|.|||+||++.+...|.. +++.+.+.||.++++|+||++.+..... .....++.+
T Consensus 19 ~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--------------------~~~~~~~~~ 78 (297)
T d1q0ra_ 19 DPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDF--------------------AAHPYGFGE 78 (297)
T ss_dssp CTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCT--------------------TTSCCCHHH
T ss_pred CCCCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccc--------------------cccccccch
Confidence 3456889999999998888854 7788888999999999998865421100 111124555
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh------------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI------------------ 176 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~------------------ 176 (251)
.++++..+++ .. +.+++.++|||+||.+++.+|..+|+++++++++++.........
T Consensus 79 ~~~d~~~ll~---~l--~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (297)
T d1q0ra_ 79 LAADAVAVLD---GW--GVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 153 (297)
T ss_dssp HHHHHHHHHH---HT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred hhhhhccccc---cc--cccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhhhh
Confidence 5666777666 33 456899999999999999999999999999998876432110000
Q ss_pred -----------------------hh---------------------------------------------------hccc
Q 025550 177 -----------------------DQ---------------------------------------------------FTSD 182 (251)
Q Consensus 177 -----------------------~~---------------------------------------------------~~~~ 182 (251)
.. ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (297)
T d1q0ra_ 154 QQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELR 233 (297)
T ss_dssp CHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGG
T ss_pred hHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhhhh
Confidence 00 0002
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.+++|+++++|++|.+++++.++.+.+.+. ..++++++|+||.+..+..+.+.++|.++|++
T Consensus 234 ~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 234 EVTVPTLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GCCSCEEEEEETTCSSSCTTHHHHHHHTST----TEEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEeCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 468999999999999999887665554443 46899999999999999999999999999874
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=7.7e-25 Score=169.54 Aligned_cols=219 Identities=16% Similarity=0.065 Sum_probs=150.2
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
.++..+..|+..| .+..+.|+||++||++++...+..++..|+++||.++++|+|+++.+........ ...|.
T Consensus 64 ~dg~~i~~~l~~P------~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~-~~~~~ 136 (318)
T d1l7aa_ 64 FGNARITGWYAVP------DKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPH-GHALG 136 (318)
T ss_dssp GGGEEEEEEEEEE------SSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSS-CCSSS
T ss_pred CCCcEEEEEEEec------CCCCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccch-hhhhc
Confidence 3566777766553 2345789999999999999999999999999999999999999887643321111 11111
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA 173 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~ 173 (251)
... ..............+......++.+. +..++.++++++|+|+||..++..+...++ +++++...+......
T Consensus 137 ~~~----~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 211 (318)
T d1l7aa_ 137 WMT----KGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFE 211 (318)
T ss_dssp STT----TTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHH
T ss_pred chh----hchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCcc-cceEEEeccccccHH
Confidence 000 01111222223333334444444433 455677899999999999999999999885 566665555332111
Q ss_pred hhhh-----------------------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 174 SLID-----------------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 174 ~~~~-----------------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
.... .....++++|+|+++|++|.+++++.+.++++.+ +.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l---~~~~ 288 (318)
T d1l7aa_ 212 RAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHL---ETKK 288 (318)
T ss_dssp HHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHC---CSSE
T ss_pred HHhhcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHc---CCCc
Confidence 1000 0002357899999999999999999877776655 4578
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 219 EFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 219 ~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
++++++|++|.+..+..+++++||+++|+.
T Consensus 289 ~l~~~~~~gH~~~~~~~~~~~~fl~~~LkG 318 (318)
T d1l7aa_ 289 ELKVYRYFGHEYIPAFQTEKLAFFKQILKG 318 (318)
T ss_dssp EEEEETTCCSSCCHHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCCCcHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999973
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.93 E-value=4.4e-25 Score=168.02 Aligned_cols=185 Identities=18% Similarity=0.164 Sum_probs=132.1
Q ss_pred CCCCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+++..|+|||+||++++... |..+++.|+ .+|.++++|+||++.+...... .......
T Consensus 22 G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~~------------------~~~~~~~ 82 (281)
T d1c4xa_ 22 GDPQSPAVVLLHGAGPGAHAASNWRPIIPDLA-ENFFVVAPDLIGFGQSEYPETY------------------PGHIMSW 82 (281)
T ss_dssp SCTTSCEEEEECCCSTTCCHHHHHGGGHHHHH-TTSEEEEECCTTSTTSCCCSSC------------------CSSHHHH
T ss_pred ecCCCCEEEEECCCCCCCcHHHHHHHHHHHHh-CCCEEEEEeCCCCccccccccc------------------cccchhh
Confidence 44566899999999876654 666777776 5899999999988664211100 0112244
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------- 178 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------- 178 (251)
..+.++++.++++. . ..+++.++|||+||.+++.+|.++|+++++++++++...........
T Consensus 83 ~~~~~~~i~~~i~~---~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (281)
T d1c4xa_ 83 VGMRVEQILGLMNH---F--GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADPRL 157 (281)
T ss_dssp HHHHHHHHHHHHHH---H--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSCCH
T ss_pred HHHhhhhccccccc---c--ccccceeccccccccccccccccccccccceEEeccccCccccchhHHHHHHHhhhhccc
Confidence 55566667776663 3 34689999999999999999999999999999988743211100000
Q ss_pred ----------------------------------------------------------hcccCCCCCEEEEccCCCCccc
Q 025550 179 ----------------------------------------------------------FTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 179 ----------------------------------------------------------~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
....++++|+++++|++|.+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 237 (281)
T d1c4xa_ 158 TPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRIVP 237 (281)
T ss_dssp HHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSSSC
T ss_pred chhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCCCCcC
Confidence 0002478999999999999999
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++.++.+.+.+. ..++++++++||....+..+++.+-|.++|+
T Consensus 238 ~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T d1c4xa_ 238 LDTSLYLTKHLK----HAELVVLDRCGHWAQLERWDAMGPMLMEHFR 280 (281)
T ss_dssp THHHHHHHHHCS----SEEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHhC
Confidence 887766655543 4688999999999887777777777777765
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.93 E-value=4.3e-24 Score=155.48 Aligned_cols=178 Identities=13% Similarity=0.065 Sum_probs=123.1
Q ss_pred CCccEEEEEecCC---CCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLG---DSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~---~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.+.+++|++|+.+ ++..+ +..+++.|++.||.++++|||+.+.+.. .+ .....
T Consensus 33 ~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g---------~~------------~~~~~- 90 (218)
T d2fuka1 33 VQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG---------SF------------DHGDG- 90 (218)
T ss_dssp CCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS---------CC------------CTTTH-
T ss_pred CCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCC---------cc------------CcCcc-
Confidence 4556789999543 33222 3458889999999999999998765421 11 11111
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEE
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWS 191 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~ 191 (251)
.++++..+++.+.+ ..+.++++++|||+||.+++.++.+.+ +++++++++...... +......+|+|++
T Consensus 91 ---~~~D~~a~~~~~~~-~~~~~~v~l~G~S~Gg~va~~~a~~~~--~~~lil~ap~~~~~~-----~~~~~~~~P~Lvi 159 (218)
T d2fuka1 91 ---EQDDLRAVAEWVRA-QRPTDTLWLAGFSFGAYVSLRAAAALE--PQVLISIAPPAGRWD-----FSDVQPPAQWLVI 159 (218)
T ss_dssp ---HHHHHHHHHHHHHH-HCTTSEEEEEEETHHHHHHHHHHHHHC--CSEEEEESCCBTTBC-----CTTCCCCSSEEEE
T ss_pred ---hHHHHHHHHHHHhh-cccCceEEEEEEcccchhhhhhhcccc--cceEEEeCCcccchh-----hhccccccceeeE
Confidence 13333333333322 235679999999999999998887753 789999988654322 2233567899999
Q ss_pred ccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCH--H-HHHHHHHHHHHhhcCCC
Q 025550 192 HGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISN--E-ELRNLESWIKTRMSCSS 250 (251)
Q Consensus 192 ~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~--~-~~~~~~~~l~~~l~~~~ 250 (251)
+|++|.++|+++++++.+.+ ..++++++++|++|.|.. + ..+.+.+|++++|..++
T Consensus 160 ~G~~D~~vp~~~~~~l~~~~---~~~~~l~~i~ga~H~f~~~~~~l~~~~~~~v~~~l~~~~ 218 (218)
T d2fuka1 160 QGDADEIVDPQAVYDWLETL---EQQPTLVRMPDTSHFFHRKLIDLRGALQHGVRRWLPATP 218 (218)
T ss_dssp EETTCSSSCHHHHHHHHTTC---SSCCEEEEETTCCTTCTTCHHHHHHHHHHHHGGGCSSCC
T ss_pred ecCCCcCcCHHHHHHHHHHc---cCCceEEEeCCCCCCCCCCHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999766655444 346789999999998864 2 34678899999987653
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.93 E-value=1.1e-24 Score=164.24 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=133.5
Q ss_pred CCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
.+.+.|+||++||++++...+..+++.|+++||.++.+|+++....+ .....++.+
T Consensus 48 ~~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~~------------------------~~~~~d~~~ 103 (260)
T d1jfra_ 48 ADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP------------------------DSRGRQLLS 103 (260)
T ss_dssp TTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH------------------------HHHHHHHHH
T ss_pred CCCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCCc------------------------hhhHHHHHH
Confidence 34577999999999999999999999999999999999987432210 001122222
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccC
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGM 194 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~ 194 (251)
+++.+.+.... ...+|.+||+++|||+||.+++.++...+ ++++++.++++..... ..+.++|+|+++|+
T Consensus 104 ~~~~l~~~~~~--~~~vD~~rI~v~G~S~GG~~al~aa~~~~-~~~A~v~~~~~~~~~~-------~~~~~~P~l~i~G~ 173 (260)
T d1jfra_ 104 ALDYLTQRSSV--RTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDKT-------WPELRTPTLVVGAD 173 (260)
T ss_dssp HHHHHHHTSTT--GGGEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCCSCCC-------CTTCCSCEEEEEET
T ss_pred HHHHHHhhhhh--hccccccceEEEeccccchHHHHHHhhhc-cchhheeeeccccccc-------ccccccceeEEecC
Confidence 23222221110 23468899999999999999999988887 5888899998765432 23478999999999
Q ss_pred CCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC----HHHHHHHHHHHHHhhcCC
Q 025550 195 ADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS----NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 195 ~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l~~~ 249 (251)
+|.++|++............+.++++++++|++|.+. ....+.++.||+.+|+..
T Consensus 174 ~D~~vp~~~~~~~~~~~~~~~~~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~~d 232 (260)
T d1jfra_ 174 GDTVAPVATHSKPFYESLPGSLDKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDSD 232 (260)
T ss_dssp TCSSSCTTTTHHHHHHHSCTTSCEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCHHHHHHHHHHhcccCCCEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhcCc
Confidence 9999998765444444444567889999999999864 344577899999998754
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.92 E-value=4.6e-24 Score=162.86 Aligned_cols=206 Identities=15% Similarity=0.129 Sum_probs=143.7
Q ss_pred cccceeeE-EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCC
Q 025550 3 LTKPIVLF-TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
+++|..++ ..+..++..+.. .. .+ ..|+|||+||++++...|..+++.|. .+|.++.+|+||++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~y--~~-------~G--~gp~vv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~ 69 (293)
T d1ehya_ 2 IRRPEDFKHYEVQLPDVKIHY--VR-------EG--AGPTLLLLHGWPGFWWEWSKVIGPLA-EHYDVIVPDLRGFGDSE 69 (293)
T ss_dssp CCCGGGSCEEEEECSSCEEEE--EE-------EE--CSSEEEEECCSSCCGGGGHHHHHHHH-TTSEEEEECCTTSTTSC
T ss_pred CCCCCCCcceEEEECCEEEEE--EE-------EC--CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEecCCcccCCc
Confidence 45665444 344555655532 22 11 34789999999999999999999886 48999999999876432
Q ss_pred cccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcce
Q 025550 82 VTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGG 161 (251)
Q Consensus 82 ~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~ 161 (251)
... .......+..+.++++.++++ .. +.+++.++|||+||.+++.++.++|+++.+
T Consensus 70 ~~~-------------------~~~~~~~~~~~~a~~~~~~~~---~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 125 (293)
T d1ehya_ 70 KPD-------------------LNDLSKYSLDKAADDQAALLD---AL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIK 125 (293)
T ss_dssp CCC-------------------TTCGGGGCHHHHHHHHHHHHH---HT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEE
T ss_pred ccc-------------------ccccccccchhhhhHHHhhhh---hc--CccccccccccccccchhcccccCccccce
Confidence 110 001123345556666666666 33 456899999999999999999999999999
Q ss_pred EEEeccCCCCcchhh-------------------------------hh--------------------------------
Q 025550 162 GAIFSGWVPFNASLI-------------------------------DQ-------------------------------- 178 (251)
Q Consensus 162 ~i~~~~~~~~~~~~~-------------------------------~~-------------------------------- 178 (251)
++++++..+...... ..
T Consensus 126 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (293)
T d1ehya_ 126 AAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPD 205 (293)
T ss_dssp EEEECCSCTTC-----------CCHHHHHTTCHHHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTT
T ss_pred eeeeeccCccccchhhhhhhhhhhhhhhhhccchhhhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccch
Confidence 999887432110000 00
Q ss_pred ----------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHH
Q 025550 179 ----------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELR 236 (251)
Q Consensus 179 ----------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~ 236 (251)
......++|+++++|++|..++.+.. .+.+++...+.++++++|+||....+..+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~~~~~~---~~~~~~~~~~~~~~~i~~~gH~~~~e~Pe 282 (293)
T d1ehya_ 206 NIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMIWGLGDTCVPYAPL---IEFVPKYYSNYTMETIEDCGHFLMVEKPE 282 (293)
T ss_dssp HHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEEEECCSSCCTTHHH---HHHHHHHBSSEEEEEETTCCSCHHHHCHH
T ss_pred hhhhhhhhhhhccccchhhhhhhhhhccCCceEEEEeCCCCCcCHHHH---HHHHHHhCCCCEEEEECCCCCchHHHCHH
Confidence 00013678999999999999997754 33444444468999999999999888899
Q ss_pred HHHHHHHHhhc
Q 025550 237 NLESWIKTRMS 247 (251)
Q Consensus 237 ~~~~~l~~~l~ 247 (251)
.+.+.|+++++
T Consensus 283 ~~~~~I~~Ffr 293 (293)
T d1ehya_ 283 IAIDRIKTAFR 293 (293)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhhC
Confidence 99999988874
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=4.7e-24 Score=162.27 Aligned_cols=197 Identities=16% Similarity=0.141 Sum_probs=131.7
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
..+..++..+...... ....+|+||++||++++...|......+.+.||.++++|+||++.+...
T Consensus 5 ~~~~~~g~~i~y~~~g--------~~~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~------- 69 (290)
T d1mtza_ 5 NYAKVNGIYIYYKLCK--------APEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEP------- 69 (290)
T ss_dssp EEEEETTEEEEEEEEC--------CSSCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCC-------
T ss_pred CeEEECCEEEEEEEcC--------CCCCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCcccccc-------
Confidence 3445566665432222 1234588999999988888888877777788999999999988654210
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.....++...++++.++++++. ..+++.++|||+||.+++.+|.++|+++++++++++...
T Consensus 70 ---------------~~~~~~~~~~~~~l~~ll~~l~----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 130 (290)
T d1mtza_ 70 ---------------DQSKFTIDYGVEEAEALRSKLF----GNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 130 (290)
T ss_dssp ---------------CGGGCSHHHHHHHHHHHHHHHH----TTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred ---------------ccccccccchhhhhhhhhcccc----cccccceecccccchhhhhhhhcChhhheeeeecccccC
Confidence 1112234555666666666432 346899999999999999999999999999998887432
Q ss_pred Ccchhh------------------------------------------------------hh------------------
Q 025550 171 FNASLI------------------------------------------------------DQ------------------ 178 (251)
Q Consensus 171 ~~~~~~------------------------------------------------------~~------------------ 178 (251)
...... ..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (290)
T d1mtza_ 131 VPLTVKEMNRLIDELPAKYRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNE 210 (290)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBT
T ss_pred cccchhhhhhhhhhhhHHHHHHHHHhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhH
Confidence 110000 00
Q ss_pred -------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHh
Q 025550 179 -------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTR 245 (251)
Q Consensus 179 -------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 245 (251)
.....+++|+++++|++|.+++ +.++.+.+.+. ..++++++++||....+..+.+.+.|.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~-~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~F 285 (290)
T d1mtza_ 211 FTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIA----GSELHVFRDCSHLTMWEDREGYNKLLSDF 285 (290)
T ss_dssp TBCCSTTTTCBCTTTGGGCCSCEEEEEETTCSSCH-HHHHHHHHHST----TCEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HhHhhhhhcccHHHHhhcccceEEEEEeCCCCCCH-HHHHHHHHHCC----CCEEEEECCCCCchHHhCHHHHHHHHHHH
Confidence 0001367999999999998765 44444444443 46889999999998766655554444444
Q ss_pred h
Q 025550 246 M 246 (251)
Q Consensus 246 l 246 (251)
|
T Consensus 286 L 286 (290)
T d1mtza_ 286 I 286 (290)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.92 E-value=4.3e-25 Score=170.53 Aligned_cols=182 Identities=14% Similarity=0.110 Sum_probs=134.9
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+|||+||++++...|..+...+.+.||.++++|+||++.+.... .....++...++
T Consensus 46 ~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~---------------------~~~~~~~~~~~~ 104 (310)
T d1b6ga_ 46 AEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV---------------------DEEDYTFEFHRN 104 (310)
T ss_dssp CSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES---------------------CGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCcccccccc---------------------cccccccccccc
Confidence 46899999999999999999999998899999999999886642111 112235666677
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh--------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-------------------- 177 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-------------------- 177 (251)
++.++++. . +.+++.|+||||||.+++.+|.++|++++++|++++..........
T Consensus 105 ~l~~~l~~---l--~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (310)
T d1b6ga_ 105 FLLALIER---L--DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWKYDL 179 (310)
T ss_dssp HHHHHHHH---H--TCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHHH
T ss_pred chhhhhhh---c--cccccccccceecccccccchhhhccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhhhhh
Confidence 77777773 3 3468999999999999999999999999999998764321110000
Q ss_pred -------------h----------------hc---------------------------------ccCCCCCEEEEccCC
Q 025550 178 -------------Q----------------FT---------------------------------SDAKKTPILWSHGMA 195 (251)
Q Consensus 178 -------------~----------------~~---------------------------------~~~~~~p~l~~~g~~ 195 (251)
. +. ....++|+++++|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~ 259 (310)
T d1b6ga_ 180 VTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAIGMK 259 (310)
T ss_dssp HSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEETT
T ss_pred ccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEEeCC
Confidence 0 00 014789999999999
Q ss_pred CCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 196 DRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 196 D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
|..++.+..+.+.+.+... .++++++++||+...+..+.+.+.|.++|.+
T Consensus 260 D~~~~~~~~~~~~~~~~~~---~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~~ 309 (310)
T d1b6ga_ 260 DKLLGPDVMYPMKALINGC---PEPLEIADAGHFVQEFGEQVAREALKHFAET 309 (310)
T ss_dssp CSSSSHHHHHHHHHHSTTC---CCCEEETTCCSCGGGGHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHhcCCC---ccEEEECCCcCchhhhCHHHHHHHHHHHHhC
Confidence 9999988666655555432 3677899999988766677777777777654
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.92 E-value=3.1e-24 Score=165.16 Aligned_cols=185 Identities=12% Similarity=0.081 Sum_probs=129.5
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCC-CCCCcccCCCCcCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSA-PNNPVTCNYGAVMPS 92 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~g~~~~~ 92 (251)
..++..++.|...+.. +..+++++||++||++++...|..+++.|.++||.++++|+||+ +.+...
T Consensus 11 ~~dg~~l~~w~~~p~~----~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~--------- 77 (302)
T d1thta_ 11 VNNGQELHVWETPPKE----NVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGS--------- 77 (302)
T ss_dssp ETTTEEEEEEEECCCT----TSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC---------------
T ss_pred cCCCCEEEEEEecCcC----CCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc---------
Confidence 4567778877665422 23356789999999999999999999999999999999999985 443110
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
...........++..+++.+... +.++++|+||||||.+++.+|.. ..++++|+.+|.....
T Consensus 78 --------------~~~~~~~~~~~dl~~vi~~l~~~--~~~~i~lvG~SmGG~ial~~A~~--~~v~~li~~~g~~~~~ 139 (302)
T d1thta_ 78 --------------IDEFTMTTGKNSLCTVYHWLQTK--GTQNIGLIAASLSARVAYEVISD--LELSFLITAVGVVNLR 139 (302)
T ss_dssp ----------------CCCHHHHHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHTTT--SCCSEEEEESCCSCHH
T ss_pred --------------ccCCCHHHHHHHHHHHHHhhhcc--CCceeEEEEEchHHHHHHHHhcc--cccceeEeecccccHH
Confidence 01112233344555555544333 45689999999999999887754 3588999888754322
Q ss_pred chhhhh---------------------------------------------hcccCCCCCEEEEccCCCCcccchhcccc
Q 025550 173 ASLIDQ---------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 173 ~~~~~~---------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
...... -...+.++|+++++|++|.+++++.++.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l 219 (302)
T d1thta_ 140 DTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDM 219 (302)
T ss_dssp HHHHHHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHH
T ss_pred HHHHHHHhhccchhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHH
Confidence 110000 01135899999999999999999987777
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
++.++. .++++.+++|++|.+.
T Consensus 220 ~~~i~s--~~~kl~~~~g~~H~l~ 241 (302)
T d1thta_ 220 LAHIRT--GHCKLYSLLGSSHDLG 241 (302)
T ss_dssp HTTCTT--CCEEEEEETTCCSCTT
T ss_pred HHhCCC--CCceEEEecCCCcccc
Confidence 776654 3689999999999875
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.92 E-value=2.1e-23 Score=157.83 Aligned_cols=178 Identities=15% Similarity=0.215 Sum_probs=126.4
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|+|||+||++++...|..+++.|.++||.++++|+||++.+.. .....+..+.+++
T Consensus 23 G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 79 (277)
T d1brta_ 23 GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQ-----------------------PTTGYDYDTFAAD 79 (277)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc-----------------------cccccchhhhhhh
Confidence 36799999999999999999998888999999999998765311 1122345566777
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhH-HHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGG-ALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------------- 178 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------------- 178 (251)
+.++++. .+ .++++++|||+|| .++..++..+|+++++++++++..+........
T Consensus 80 l~~~l~~---l~--~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (277)
T d1brta_ 80 LNTVLET---LD--LQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA 154 (277)
T ss_dssp HHHHHHH---HT--CCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHH
T ss_pred hhhhhhc---cC--cccccccccccchhhhhHHHHHhhhcccceEEEecCCCcccccchhhhhhhhhhhHHHHHHHhhhc
Confidence 7777774 33 4689999999996 556667778899999999988643321100000
Q ss_pred -------------------h-------------------------------------cccCCCCCEEEEccCCCCcccch
Q 025550 179 -------------------F-------------------------------------TSDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 179 -------------------~-------------------------------------~~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
. ...++++|+++++|++|..++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~ 234 (277)
T d1brta_ 155 DRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIE 234 (277)
T ss_dssp CHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGG
T ss_pred cchhhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeEeecCCCCcCHH
Confidence 0 00136889999999999999876
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.. .+.+.+.....++++++|+||....+..+.+.+-|.++|+
T Consensus 235 ~~---~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL~ 276 (277)
T d1brta_ 235 NT---ARVFHKALPSAEYVEVEGAPHGLLWTHAEEVNTALLAFLA 276 (277)
T ss_dssp GT---HHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HH---HHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHC
Confidence 43 3434443345689999999999877776666666666553
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.4e-23 Score=162.34 Aligned_cols=179 Identities=12% Similarity=0.104 Sum_probs=129.4
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|+|||+||++++...|..+++.|.++||.++++|+||++.+..+. ........+.++.
T Consensus 32 gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~---------------------~~~~~~~~~~~~~ 90 (322)
T d1zd3a2 32 GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP---------------------EIEEYCMEVLCKE 90 (322)
T ss_dssp SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCS---------------------CGGGGSHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEecccccccccccc---------------------ccccccccccchh
Confidence 3789999999999999999999998899999999999876532110 1122345556666
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------------------------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------------------------ 174 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------------------------ 174 (251)
+.++++. . +.+++.++|||+||.+++.+|.++|+++.+++++++.......
T Consensus 91 i~~l~~~---l--~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (322)
T d1zd3a2 91 MVTFLDK---L--GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPG 165 (322)
T ss_dssp HHHHHHH---H--TCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCCCCSSSCHHHHHHTCGGGHHHHHTTSTT
T ss_pred hhhhhhc---c--cccccccccccchHHHHHHHHHhCCccccceEEEcccccccccccchhhhhhccchhhhHHhhhccc
Confidence 6666663 2 3568999999999999999999999999999988752210000
Q ss_pred -------------hh---------------------------------h------------h------------------
Q 025550 175 -------------LI---------------------------------D------------Q------------------ 178 (251)
Q Consensus 175 -------------~~---------------------------------~------------~------------------ 178 (251)
+. . .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (322)
T d1zd3a2 166 VAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMER 245 (322)
T ss_dssp HHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTTHHHHHTTSCHHH
T ss_pred hhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhccccccccccccccc
Confidence 00 0 0
Q ss_pred -------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 179 -------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 179 -------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
....++++|+++++|++|..++.+..+.+.+.+. ..++++++++||+...+..+++.+-|.++|.
T Consensus 246 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~v~~~i~~FL~ 317 (322)
T d1zd3a2 246 NWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 317 (322)
T ss_dssp HHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred ccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHh
Confidence 0002468999999999999999887776665543 3688899999999876666555555555543
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.6e-24 Score=157.87 Aligned_cols=177 Identities=16% Similarity=0.096 Sum_probs=119.4
Q ss_pred CCCCccEEEEEecCCCCCCCchhh--hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLGDSGPANEPI--KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.++.++.|||+||++++...|..+ ++.|++.||.++++|+|+++.+...... . .......
T Consensus 27 ~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~-------~-----------~~~~~~~ 88 (208)
T d1imja_ 27 SGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP-------A-----------PIGELAP 88 (208)
T ss_dssp SSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS-------S-----------CTTSCCC
T ss_pred CCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCcc-------c-----------ccchhhh
Confidence 445678899999999998888764 5788889999999999987654211000 0 0001111
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEc
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSH 192 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~ 192 (251)
.+.+.++++. . +.++++|+||||||.+++.++.++|+.++++|++++....... .-.....++|+|+++
T Consensus 89 ---~~~l~~~~~~---l--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~~~~~---~~~~~~i~~P~Lii~ 157 (208)
T d1imja_ 89 ---GSFLAAVVDA---L--ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKIN---AANYASVKTPALIVY 157 (208)
T ss_dssp ---THHHHHHHHH---H--TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGSC---HHHHHTCCSCEEEEE
T ss_pred ---hhhhhhcccc---c--ccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccccccc---ccccccccccccccc
Confidence 1223333442 2 3568899999999999999999999999999999885432211 111235789999999
Q ss_pred cCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhh
Q 025550 193 GMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRM 246 (251)
Q Consensus 193 g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 246 (251)
|++|.+++.+. +.++. -...++.+++|++|....+..+.+.+-+.++|
T Consensus 158 G~~D~~~~~~~-----~~~~~-~~~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl 205 (208)
T d1imja_ 158 GDQDPMGQTSF-----EHLKQ-LPNHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 205 (208)
T ss_dssp ETTCHHHHHHH-----HHHTT-SSSEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred CCcCcCCcHHH-----HHHHh-CCCCeEEEECCCCCchhhhCHHHHHHHHHHHH
Confidence 99999877542 23332 34578999999999865554444444444444
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.91 E-value=2.5e-23 Score=156.86 Aligned_cols=194 Identities=15% Similarity=0.146 Sum_probs=133.1
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC---chhhhhhhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA---NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
..+..++..+..... + +.|.|||+||++++... |..+.+.|+ .+|.++++|+|+++.+..
T Consensus 5 ~~~~~dg~~l~y~~~---------G--~g~~vvllHG~~~~~~~~~~~~~~~~~l~-~~~~v~~~D~~G~G~S~~----- 67 (268)
T d1j1ia_ 5 RFVNAGGVETRYLEA---------G--KGQPVILIHGGGAGAESEGNWRNVIPILA-RHYRVIAMDMLGFGKTAK----- 67 (268)
T ss_dssp EEEEETTEEEEEEEE---------C--CSSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCC-----
T ss_pred eEEEECCEEEEEEEE---------c--CCCeEEEECCCCCCccHHHHHHHHHHHHh-cCCEEEEEcccccccccC-----
Confidence 345567777653221 1 22569999999877654 556777775 689999999998765421
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
+.......+.++++.++++ ..++ .++++++|||+||.+++.+|.++|++++++|++++
T Consensus 68 ------------------~~~~~~~~~~~~~~~~~i~---~l~~-~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~ 125 (268)
T d1j1ia_ 68 ------------------PDIEYTQDRRIRHLHDFIK---AMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGS 125 (268)
T ss_dssp ------------------CSSCCCHHHHHHHHHHHHH---HSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred ------------------CccccccccccccchhhHH---Hhhh-cccceeeeccccccccchhhccChHhhheeeecCC
Confidence 1122334555666666666 3443 25789999999999999999999999999999887
Q ss_pred CCCCcchhhhh-----------------------------------------------------------------hccc
Q 025550 168 WVPFNASLIDQ-----------------------------------------------------------------FTSD 182 (251)
Q Consensus 168 ~~~~~~~~~~~-----------------------------------------------------------------~~~~ 182 (251)
........... -...
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 205 (268)
T d1j1ia_ 126 AGLVVEIHEDLRPIINYDFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIR 205 (268)
T ss_dssp CBCCCC----------CCSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHT
T ss_pred CccccccchhhhhhhhhhhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHh
Confidence 43211100000 0012
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
..++|+++++|++|.+++.+.++.+.+.+. ..++++++++||....+..+.+.+.+.++|.
T Consensus 206 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~ 266 (268)
T d1j1ia_ 206 KVQVPTLVVQGKDDKVVPVETAYKFLDLID----DSWGYIIPHCGHWAMIEHPEDFANATLSFLS 266 (268)
T ss_dssp TCCSCEEEEEETTCSSSCHHHHHHHHHHCT----TEEEEEESSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred hCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 478999999999999999887666555543 4699999999999877666666666666654
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.91 E-value=7.4e-24 Score=161.25 Aligned_cols=178 Identities=17% Similarity=0.200 Sum_probs=126.3
Q ss_pred ccEEEEEecCCCCCCCchhhhh---hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKT---LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.|+|||+||++.+...|..+.+ .+.+.||.++++|+||++.+... ..........
T Consensus 30 G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~----------------------~~~~~~~~~~ 87 (283)
T d2rhwa1 30 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV----------------------VMDEQRGLVN 87 (283)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCC----------------------CCSSCHHHHH
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCcccccc----------------------cccccccchh
Confidence 3689999999999988876443 34568999999999987653110 1122233344
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------h----------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID-------Q---------- 178 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-------~---------- 178 (251)
++++.++++. . +.+++.++|||+||.+++.++.++|+.+++++++++.......... .
T Consensus 88 ~~~i~~li~~---l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (283)
T d2rhwa1 88 ARAVKGLMDA---L--DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSY 162 (283)
T ss_dssp HHHHHHHHHH---H--TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCH
T ss_pred hhhccccccc---c--cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhh
Confidence 5666676663 3 3468999999999999999999999999999999864321110000 0
Q ss_pred ------------------------------------------------------hcccCCCCCEEEEccCCCCcccchhc
Q 025550 179 ------------------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 179 ------------------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
-....+++|+++++|++|.+++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 242 (283)
T d2rhwa1 163 ETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHG 242 (283)
T ss_dssp HHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHH
T ss_pred hhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEeCCCCCcCHHHH
Confidence 00014789999999999999998877
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.+.+. .+++++++++||....+..+++.+.+.++|+
T Consensus 243 ~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~FLk 281 (283)
T d2rhwa1 243 LKLLWNID----DARLHVFSKCGHWAQWEHADEFNRLVIDFLR 281 (283)
T ss_dssp HHHHHHSS----SEEEEEESSCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHhCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHh
Confidence 66655553 4689999999998877666666655555554
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.91 E-value=8.4e-23 Score=154.35 Aligned_cols=179 Identities=17% Similarity=0.223 Sum_probs=127.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|+|||+||++++...|..+++.|.+.||.++++|+||++.+.. +....+..+.++
T Consensus 20 ~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~-----------------------~~~~~~~~~~~~ 76 (275)
T d1a88a_ 20 DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQ-----------------------PSTGHDMDTYAA 76 (275)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccc-----------------------cccccccccccc
Confidence 346799999999999999999998988999999999998765321 111234455566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCh-hHHHHHHHHHhcCCCcceEEEeccCCCCcchhh-----------hhh------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQ-GGALTLASVLLYPRKLGGGAIFSGWVPFNASLI-----------DQF------ 179 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~-Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~-----------~~~------ 179 (251)
++.++++.+ +.+++.++|||+ ||.++..++.++|+++++++++++..+...... ..+
T Consensus 77 ~~~~~l~~l-----~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (275)
T d1a88a_ 77 DVAALTEAL-----DLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAA 151 (275)
T ss_dssp HHHHHHHHH-----TCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred ccccccccc-----cccccccccccccccchhhcccccCcchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhhhhh
Confidence 777777642 346788899997 666777788899999999999886432111000 000
Q ss_pred ----------------------------------------------------------cccCCCCCEEEEccCCCCcccc
Q 025550 180 ----------------------------------------------------------TSDAKKTPILWSHGMADRTVLF 201 (251)
Q Consensus 180 ----------------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~ 201 (251)
...++++|+++++|++|.+++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~ 231 (275)
T d1a88a_ 152 NRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPY 231 (275)
T ss_dssp CHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCS
T ss_pred hhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCCcCH
Confidence 0013789999999999999987
Q ss_pred hhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 202 EAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 202 ~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+... +.+.+...+.++++++++||....+..+.+.+-|.++|+
T Consensus 232 ~~~~---~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 274 (275)
T d1a88a_ 232 ADAA---PKSAELLANATLKSYEGLPHGMLSTHPEVLNPDLLAFVK 274 (275)
T ss_dssp TTTH---HHHHHHSTTEEEEEETTCCTTHHHHCHHHHHHHHHHHHH
T ss_pred HHHH---HHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHc
Confidence 6433 333333345799999999999887777777777776664
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.91 E-value=7.8e-23 Score=154.95 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=125.6
Q ss_pred ccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHH
Q 025550 39 RNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRN 118 (251)
Q Consensus 39 ~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (251)
.|.|||+||++.+...|..+++.+.+.||.++++|+|+++.+.. .....++.+.+++
T Consensus 23 g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~d 79 (279)
T d1hkha_ 23 GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSK-----------------------VNTGYDYDTFAAD 79 (279)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccc-----------------------cccccchhhhhhh
Confidence 46799999999999999999988878999999999998865421 1112345555677
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEeChhH-HHHHHHHHhcCCCcceEEEeccCCCCcchhhh-----------h--------
Q 025550 119 VHAMIDKEVAAGIDPNNVFVCGFSQGG-ALTLASVLLYPRKLGGGAIFSGWVPFNASLID-----------Q-------- 178 (251)
Q Consensus 119 l~~~i~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-----------~-------- 178 (251)
+.+++++ . +.+++.|+|||+|| .++..++..+|+++.+++++++..+....... .
T Consensus 80 i~~~i~~---l--~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (279)
T d1hkha_ 80 LHTVLET---L--DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGD 154 (279)
T ss_dssp HHHHHHH---H--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHC
T ss_pred hhhhhhh---c--CcCccccccccccccchhhhhccccccccceeEEeeccCCccccchhhhhhhhHHHHHHHHHhhhhh
Confidence 7777764 2 34589999999996 56666777889999999998764332110000 0
Q ss_pred ------------------h----c------------------------------------ccCCCCCEEEEccCCCCccc
Q 025550 179 ------------------F----T------------------------------------SDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 179 ------------------~----~------------------------------------~~~~~~p~l~~~g~~D~~~~ 200 (251)
. . ....++|+++++|++|..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 234 (279)
T d1hkha_ 155 RFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILP 234 (279)
T ss_dssp HHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSC
T ss_pred hhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceEEEEcCCCCccC
Confidence 0 0 01257999999999999988
Q ss_pred chhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 201 FEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+. ..+.+.+.-...++++++++||....+..+++.+-|.++|+
T Consensus 235 ~~~---~~~~~~~~~p~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~ 278 (279)
T d1hkha_ 235 IDA---TARRFHQAVPEADYVEVEGAPHGLLWTHADEVNAALKTFLA 278 (279)
T ss_dssp TTT---THHHHHHHCTTSEEEEETTCCTTHHHHTHHHHHHHHHHHHH
T ss_pred HHH---HHHHHHHhCCCCEEEEECCCCCchHHhCHHHHHHHHHHHHC
Confidence 653 33344433334688999999999887777666666666654
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.91 E-value=5e-24 Score=158.93 Aligned_cols=178 Identities=13% Similarity=0.124 Sum_probs=131.4
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
+.|||+||+++++..|..+++.|.++||.++++|+||++.+..+ .....+..+...++
T Consensus 3 ~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~----------------------~~~~~~~~~~~~~~ 60 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRK----------------------IEELRTLYDYTLPL 60 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCC----------------------GGGCCSHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCC----------------------CCCCcchHHHHHHH
Confidence 57999999999999999999999999999999999988664211 01112334444444
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh---------------------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ--------------------- 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~--------------------- 178 (251)
...+. ... ..+++.++|||+||.+++.++.++|+.+++++++++..+........
T Consensus 61 ~~~~~---~~~-~~~~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (258)
T d1xkla_ 61 MELME---SLS-ADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLP 136 (258)
T ss_dssp HHHHH---TSC-SSSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEE
T ss_pred hhhhh---ccc-ccccccccccchhHHHHHHHhhhhccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhhhh
Confidence 44444 222 34689999999999999999999999999999998754321110000
Q ss_pred ------------------------------------------------------hcccCCCCCEEEEccCCCCcccchhc
Q 025550 179 ------------------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 179 ------------------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
......++|+++++|++|..++.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 216 (258)
T d1xkla_ 137 YGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQ 216 (258)
T ss_dssp CSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHH
T ss_pred hhhhhhhcccccccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHHHH
Confidence 00013568999999999999998877
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+.+.+. +.++++++|+||....+.++++.+.|.+.+.
T Consensus 217 ~~~~~~~~----~~~~~~i~~~gH~~~~e~P~~~~~~l~e~~~ 255 (258)
T d1xkla_ 217 RWQIDNIG----VTEAIEIKGADHMAMLCEPQKLCASLLEIAH 255 (258)
T ss_dssp HHHHHHHC----CSEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHHCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHH
Confidence 66666653 3588999999999888888888877777664
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.90 E-value=3.9e-24 Score=159.72 Aligned_cols=176 Identities=12% Similarity=0.096 Sum_probs=130.2
Q ss_pred EEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHH
Q 025550 42 ILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHA 121 (251)
Q Consensus 42 vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 121 (251)
.||+||++.++..|..+++.|.++||.++++|+||++.+..+. ....++.+.++++.+
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~~----------------------~~~~~~~~~~~~l~~ 62 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQI----------------------EEIGSFDEYSEPLLT 62 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG----------------------GGCCSHHHHTHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------------------CCCCCHHHHHHHhhh
Confidence 5899999999999999999999899999999999886642111 111234455666666
Q ss_pred HHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhh----------------------
Q 025550 122 MIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQF---------------------- 179 (251)
Q Consensus 122 ~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~---------------------- 179 (251)
++. +.. ..+++.|+|||+||.+++.++.++|+++++++++++..+.........
T Consensus 63 ~~~---~~~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T d3c70a1 63 FLE---ALP-PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKD 138 (256)
T ss_dssp HHH---HSC-TTCCEEEEEETTHHHHHHHHHHHHGGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEET
T ss_pred hhh---hhc-cccceeecccchHHHHHHHHhhcCchhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhhcc
Confidence 555 222 457899999999999999999999999999999987543221100000
Q ss_pred ---------------------------------------------------cccCCCCCEEEEccCCCCcccchhcccch
Q 025550 180 ---------------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQAGP 208 (251)
Q Consensus 180 ---------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~ 208 (251)
.....++|+++++|++|..++.+..+.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~ 218 (256)
T d3c70a1 139 GKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQI 218 (256)
T ss_dssp TEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHHHH
Confidence 00125789999999999999987654444
Q ss_pred HHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 209 PFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 209 ~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
+.+ ...++++++|+||....+.++++.+.|.+.+.
T Consensus 219 ~~~----p~~~~~~i~~agH~~~~e~P~~~~~~l~~~~~ 253 (256)
T d3c70a1 219 ENY----KPDKVYKVEGGDHKLQLTKTKEIAEILQEVAD 253 (256)
T ss_dssp HHS----CCSEEEECCSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHC----CCCEEEEECCCCCchHHhCHHHHHHHHHHHHH
Confidence 433 35689999999999988888888888877764
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.90 E-value=7.2e-23 Score=154.59 Aligned_cols=194 Identities=13% Similarity=0.129 Sum_probs=132.2
Q ss_pred EEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCch---hhhhhhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 11 TVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANE---PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
..+..++..++.+.. + ..|.|||+||++.+...|. .+++.|+ .+|.++++|+||++.+..+
T Consensus 6 ~~i~~~G~~~~Y~~~---------G--~G~pvvllHG~~~~~~~~~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~---- 69 (271)
T d1uk8a_ 6 KSILAAGVLTNYHDV---------G--EGQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRP---- 69 (271)
T ss_dssp EEEEETTEEEEEEEE---------C--CSSEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCC----
T ss_pred CEEEECCEEEEEEEE---------e--eCCeEEEECCCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCCCCCcccc----
Confidence 456667777654322 1 2256889999988776654 4566665 6999999999988654211
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
...........+.+..+++ .. +.+++.|+|||+||.+++.++.++|+.+++++++++
T Consensus 70 ------------------~~~~~~~~~~~~~~~~~~~---~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~ 126 (271)
T d1uk8a_ 70 ------------------ENYNYSKDSWVDHIIGIMD---AL--EIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGA 126 (271)
T ss_dssp ------------------TTCCCCHHHHHHHHHHHHH---HT--TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred ------------------ccccccccccchhhhhhhh---hh--cCCCceEeeccccceeehHHHHhhhccchheeeccc
Confidence 1111233444555555555 33 456899999999999999999999999999998876
Q ss_pred CCCCcchhhh-------------------h------------------------------------------------hc
Q 025550 168 WVPFNASLID-------------------Q------------------------------------------------FT 180 (251)
Q Consensus 168 ~~~~~~~~~~-------------------~------------------------------------------------~~ 180 (251)
.......... . ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (271)
T d1uk8a_ 127 AGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDED 206 (271)
T ss_dssp CCSCCCCCHHHHHHHTCCSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHH
T ss_pred CCCcccchhhhhhhhhccchhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHH
Confidence 4432110000 0 00
Q ss_pred ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 181 SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 181 ~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
....++|+++++|++|..++.+.++.+.+.+. ..++++++++||....+..+++.+-+.++|+
T Consensus 207 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 269 (271)
T d1uk8a_ 207 IKTLPNETLIIHGREDQVVPLSSSLRLGELID----RAQLHVFGRCGHWTQIEQTDRFNRLVVEFFN 269 (271)
T ss_dssp HTTCCSCEEEEEETTCSSSCHHHHHHHHHHCT----TEEEEEESSCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHhhccceeEEecCCCCCcCHHHHHHHHHhCC----CCEEEEECCCCCchHHHCHHHHHHHHHHHHh
Confidence 02478999999999999999887766655553 3689999999999877666666666655553
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.90 E-value=1.9e-23 Score=159.28 Aligned_cols=194 Identities=16% Similarity=0.068 Sum_probs=138.5
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCc
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPS 92 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 92 (251)
+..++..++..... .+..|+|||+||++++...|..+++.|+ .+|.++++|+||++.+..
T Consensus 12 i~~~g~~i~y~~~G---------~~~~p~lvllHG~~~~~~~~~~~~~~L~-~~~~vi~~d~~G~G~S~~---------- 71 (291)
T d1bn7a_ 12 VEVLGERMHYVDVG---------PRDGTPVLFLHGNPTSSYLWRNIIPHVA-PSHRCIAPDLIGMGKSDK---------- 71 (291)
T ss_dssp EEETTEEEEEEEES---------CSSSSCEEEECCTTCCGGGGTTTHHHHT-TTSCEEEECCTTSTTSCC----------
T ss_pred EEECCEEEEEEEeC---------CCCCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCCccccc----------
Confidence 34466666543332 2344679999999999999999999885 599999999998865421
Q ss_pred cccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCc
Q 025550 93 WFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFN 172 (251)
Q Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~ 172 (251)
+....+..+.++++.++++ +. +.+++.|+|||+||.+++.++.++|+.+++++++++.....
T Consensus 72 -------------~~~~~~~~~~~~~l~~~l~---~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~~~~~~ 133 (291)
T d1bn7a_ 72 -------------PDLDYFFDDHVRYLDAFIE---AL--GLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIP 133 (291)
T ss_dssp -------------CSCCCCHHHHHHHHHHHHH---HT--TCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEECCCBC
T ss_pred -------------cccccchhHHHHHHhhhhh---hh--ccccccccccccccchhHHHHHhCCcceeeeeeeccccCCc
Confidence 1112234555666766666 33 35689999999999999999999999999999876533211
Q ss_pred chhh--h-------h-----------------------------------------h-----------------------
Q 025550 173 ASLI--D-------Q-----------------------------------------F----------------------- 179 (251)
Q Consensus 173 ~~~~--~-------~-----------------------------------------~----------------------- 179 (251)
.... . . .
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (291)
T d1bn7a_ 134 TWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPA 213 (291)
T ss_dssp SGGGSCHHHHHHHHHHTSTTHHHHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSH
T ss_pred cchhhhhhhhhHHHHHhhhhhHHHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhc
Confidence 0000 0 0 0
Q ss_pred -----------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcC
Q 025550 180 -----------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSC 248 (251)
Q Consensus 180 -----------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 248 (251)
.....++|+++++|++|.+++.+.++.+.+.+. ..++++++++||....+..+.+.+.+.++|.+
T Consensus 214 ~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~~ 289 (291)
T d1bn7a_ 214 NIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLP----NCKTVDIGPGLHYLQEDNPDLIGSEIARWLPG 289 (291)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHST----TEEEEEEEEESSCGGGTCHHHHHHHHHHHSGG
T ss_pred hhhhhhhhhhhhhhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHHh
Confidence 001378999999999999999887766666553 36888999999998877777777777777653
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.90 E-value=1.9e-22 Score=152.37 Aligned_cols=177 Identities=17% Similarity=0.165 Sum_probs=121.5
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|.|||+||++++...|..+++.|.++||.++++|+||++.+.. .....+..+.++++
T Consensus 20 ~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~dl 76 (274)
T d1a8qa_ 20 RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTP-----------------------VWDGYDFDTFADDL 76 (274)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccc-----------------------ccccccchhhHHHH
Confidence 5689999999999999999998888999999999998765321 11223344556667
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh-cCCCcceEEEeccCCCCcchhh-----------hh---------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL-YPRKLGGGAIFSGWVPFNASLI-----------DQ--------- 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~~~~~~i~~~~~~~~~~~~~-----------~~--------- 178 (251)
.++++. . ..+++.++|||+||.+++.++.+ .|+++++++.+++..+...... ..
T Consensus 77 ~~~l~~---l--~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (274)
T d1a8qa_ 77 NDLLTD---L--DLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTER 151 (274)
T ss_dssp HHHHHH---T--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHH---h--hhhhhcccccccccchHHHHHHHhhhccceeEEEEeccCccchhhhhccchhhHHHHHHHHhhhhhhh
Confidence 676663 3 35689999999999988876555 5888999998886332111000 00
Q ss_pred -----------h-------------------------------------------cccCCCCCEEEEccCCCCcccchhc
Q 025550 179 -----------F-------------------------------------------TSDAKKTPILWSHGMADRTVLFEAG 204 (251)
Q Consensus 179 -----------~-------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~ 204 (251)
+ ...++++|+++++|++|.+++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~ 231 (274)
T d1a8qa_ 152 SQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDAT 231 (274)
T ss_dssp HHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGT
T ss_pred HHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeeccCCCCCcCHHHH
Confidence 0 0024789999999999999987653
Q ss_pred ccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHHhhc
Q 025550 205 QAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKTRMS 247 (251)
Q Consensus 205 ~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 247 (251)
. +.+++.-...++++++++||... .+..+.+.+-+.++|+
T Consensus 232 ~---~~~~~~~~~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~ 273 (274)
T d1a8qa_ 232 G---RKSAQIIPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp H---HHHHHHSTTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred H---HHHHHhCCCCEEEEECCCCCcccccccCHHHHHHHHHHHHC
Confidence 2 33333223468999999999754 3445555555555553
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.90 E-value=1.1e-23 Score=156.28 Aligned_cols=195 Identities=12% Similarity=0.028 Sum_probs=128.7
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
.++..+..|+.. |.+.+.|+||++|+..+.....+.+++.|++.||.++.+|+.+.+......... .+.
T Consensus 11 ~dg~~~~a~~~~-------P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~~----~~~ 79 (233)
T d1dina_ 11 YDGHTFGALVGS-------PAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQ----DER 79 (233)
T ss_dssp TTSCEECEEEEC-------CSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTT----SHH
T ss_pred CCCCEEEEEEEC-------CCCCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccChH----HHH
Confidence 467778887776 345688999999977766666777888999999999999976433221111000 000
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~ 174 (251)
..... .......+....+.++...++.+.....+.++|+++|+|+||.+++.++... .+.+.+.+.+......
T Consensus 80 ~~~~~----~~~~~~~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~~~--~~~~~~~~~~~~~~~~- 152 (233)
T d1dina_ 80 QREQA----YKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAAKG--YVDRAVGYYGVGLEKQ- 152 (233)
T ss_dssp HHHHH----HHHHHTCCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHHHT--CSSEEEEESCSCGGGG-
T ss_pred HHHHH----HHHhhhhhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccccc--ccceeccccccccccc-
Confidence 00000 0000011233345555555555544455667999999999999999887654 3566666666432211
Q ss_pred hhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 175 LIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 175 ~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.. ...++++|+++++|++|+.+|.+..+.+.+.++ .+.++++++|||++|.|.
T Consensus 153 -~~--~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~-~~~~~~~~~y~ga~HgF~ 205 (233)
T d1dina_ 153 -LN--KVPEVKHPALFHMGGQDHFVPAPSRQLITEGFG-ANPLLQVHWYEEAGHSFA 205 (233)
T ss_dssp -GG--GGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHT-TCTTEEEEEETTCCTTTT
T ss_pred -hh--hhhccCCcceeeecccccCCCHHHHHHHHHHHh-cCCCEEEEEECCCCcCCC
Confidence 11 123478999999999999999998887777665 477899999999999874
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=3.2e-22 Score=155.20 Aligned_cols=223 Identities=11% Similarity=0.006 Sum_probs=141.9
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
.++..+..|+..|. ..+++.|+||++||++.....+. ....++++||.++.+|+++++.+..............
T Consensus 63 ~dG~~l~~~l~~P~-----~~~~~~P~Vv~~hG~~~~~~~~~-~~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~ 136 (322)
T d1vlqa_ 63 YRGQRIKGWLLVPK-----LEEEKLPCVVQYIGYNGGRGFPH-DWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPV 136 (322)
T ss_dssp GGGCEEEEEEEEEC-----CSCSSEEEEEECCCTTCCCCCGG-GGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSB
T ss_pred CCCcEEEEEEEecc-----CCCCCccEEEEecCCCCCcCcHH-HHHHHHhCCCEEEEeeccccCCCCCCccccccccccc
Confidence 45667777776532 23457899999999887765554 3446778999999999999887643322111111000
Q ss_pred cccCCC--CCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 95 DIHEIP--VTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 95 ~~~~~~--~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
+..... ...............+..+...++.+. +..++.++++++|+|+||.+++.++...+ .+++++...+....
T Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~~~a~v~~~~~~~~ 215 (322)
T d1vlqa_ 137 DPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPFLCH 215 (322)
T ss_dssp CCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCCSCC
T ss_pred cccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-CccEEEEeCCcccc
Confidence 000000 000111112222223334444444443 55667889999999999999998888777 58888877764432
Q ss_pred cchhhh--------------------------h-------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 172 NASLID--------------------------Q-------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 172 ~~~~~~--------------------------~-------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
...... . ....++++|+|+++|++|.++|++.+.+++ +..+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~---~~~~~~~ 292 (322)
T d1vlqa_ 216 FRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAY---NYYAGPK 292 (322)
T ss_dssp HHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHH---HHCCSSE
T ss_pred HHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHH---HHCCCCe
Confidence 111000 0 002357899999999999999998765554 4456689
Q ss_pred EEEEeCCCCCCCCHHH-HHHHHHHHHHhhc
Q 025550 219 EFKAYPGLGHSISNEE-LRNLESWIKTRMS 247 (251)
Q Consensus 219 ~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~ 247 (251)
++++||+++|...... .++.++||++.|+
T Consensus 293 ~l~~~p~~~H~~~~~~~~~~~~~~l~~~l~ 322 (322)
T d1vlqa_ 293 EIRIYPYNNHEGGGSFQAVEQVKFLKKLFE 322 (322)
T ss_dssp EEEEETTCCTTTTHHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCCccccCHHHHHHHHHHHhC
Confidence 9999999999886544 4667899999874
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.90 E-value=2.8e-22 Score=150.93 Aligned_cols=177 Identities=18% Similarity=0.201 Sum_probs=126.1
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|+|||+||++++...|..+++.|.++||.++++|+||++.+.. +....+.....+++
T Consensus 20 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~~~ 76 (271)
T d1va4a_ 20 KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQ-----------------------PWTGNDYDTFADDI 76 (271)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccc-----------------------cccccccccccccc
Confidence 5688999999999999999999988999999999998765421 11122344555566
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHH-HHHHHhcCCCcceEEEeccCCCCcchhhh-----------hh--------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALT-LASVLLYPRKLGGGAIFSGWVPFNASLID-----------QF-------- 179 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a-~~~a~~~p~~~~~~i~~~~~~~~~~~~~~-----------~~-------- 179 (251)
.++++. . +.++++++|||+||.++ ..++..+|+++.+++.+++..+....... .+
T Consensus 77 ~~~~~~---~--~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271)
T d1va4a_ 77 AQLIEH---L--DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLKDR 151 (271)
T ss_dssp HHHHHH---H--TCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHHHHH
T ss_pred eeeeee---c--CCCcceeeccccccccccccccccccceeeEEEeecccccccccchhhhhhhhhhHHHHHHHHhhhhh
Confidence 665553 2 35689999999988765 55677789999999988764432110000 00
Q ss_pred ------------------------------------------------------cccCCCCCEEEEccCCCCcccchhcc
Q 025550 180 ------------------------------------------------------TSDAKKTPILWSHGMADRTVLFEAGQ 205 (251)
Q Consensus 180 ------------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~~~ 205 (251)
...+.++|+++++|++|..++.+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~ 231 (271)
T d1va4a_ 152 AQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFETTG 231 (271)
T ss_dssp HHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSCGGGTH
T ss_pred hhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccCCCCCCCHHHHH
Confidence 00137899999999999999988765
Q ss_pred cchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 206 AGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++.+.+. ...++++++++||....+..+.+.+.|.++|+
T Consensus 232 ~~~~~~~---~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~ 270 (271)
T d1va4a_ 232 KVAAELI---KGAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp HHHHHHS---TTCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHhC---CCCEEEEECCCCCchHHhCHHHHHHHHHHHHC
Confidence 5544432 24688999999999887777777777777765
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=5.6e-23 Score=154.16 Aligned_cols=174 Identities=15% Similarity=0.107 Sum_probs=125.2
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|||+||++++...|..+++.|. .+|.++++|+||++.+.. ....++.+.+
T Consensus 10 g~~~lvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~------------------------~~~~~~~d~~- 63 (256)
T d1m33a_ 10 GNVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRG------------------------FGALSLADMA- 63 (256)
T ss_dssp CSSEEEEECCTTCCGGGGGGTHHHHH-TTSEEEEECCTTSTTCCS------------------------CCCCCHHHHH-
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEeCCCCCCccc------------------------cccccccccc-
Confidence 34678899999999999999999886 679999999998765310 0111222222
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh---------hhh----------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL---------IDQ---------- 178 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~---------~~~---------- 178 (251)
+.+. . ...+++.++|||+||.+++.+|.++|+.+++++++++........ ...
T Consensus 64 ---~~~~---~--~~~~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (256)
T d1m33a_ 64 ---EAVL---Q--QAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQ 135 (256)
T ss_dssp ---HHHH---T--TSCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHH
T ss_pred ---cccc---c--ccccceeeeecccchHHHHHHHHhCCcccceeeeeecccccccchhhhhhHHHHHHHHHhhhhhhhH
Confidence 2111 2 235689999999999999999999999999998887532211000 000
Q ss_pred ----------------------------------------------------hcccCCCCCEEEEccCCCCcccchhccc
Q 025550 179 ----------------------------------------------------FTSDAKKTPILWSHGMADRTVLFEAGQA 206 (251)
Q Consensus 179 ----------------------------------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~ 206 (251)
-...++++|+++++|++|.++|.+.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~ 215 (256)
T d1m33a_ 136 RTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM 215 (256)
T ss_dssp HHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-
T ss_pred HHHHHHhhhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCCCCCHHHHHH
Confidence 0002478999999999999999988777
Q ss_pred chHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhcCC
Q 025550 207 GPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 207 ~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 249 (251)
+.+.+. +.++++++++||....+..+++.+.|.+++++-
T Consensus 216 l~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 216 LDKLWP----HSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp CTTTCT----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred HHHHCC----CCEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 766554 358999999999988788888888888887653
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.90 E-value=1.8e-23 Score=154.43 Aligned_cols=178 Identities=14% Similarity=0.147 Sum_probs=119.3
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..+.|||+||++++...|..+++.|+++||.++++|+||++.+..... .....+......
T Consensus 10 ~~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~--------------------~~~~~~~~~~~~ 69 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELV--------------------HTGPDDWWQDVM 69 (242)
T ss_dssp SSCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHT--------------------TCCHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc--------------------ccchhHHHHHHH
Confidence 346788999999999999999999999999999999998765321110 112222222222
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchh--hh------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASL--ID------------------ 177 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~--~~------------------ 177 (251)
.+...++ .. +.++++++|||+||.+++.++.++|... .+++++........ ..
T Consensus 70 ~~~~~~~---~~--~~~~~~l~G~S~Gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (242)
T d1tqha_ 70 NGYEFLK---NK--GYEKIAVAGLSLGGVFSLKLGYTVPIEG--IVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEE 142 (242)
T ss_dssp HHHHHHH---HH--TCCCEEEEEETHHHHHHHHHHTTSCCSC--EEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHhhhh---hc--ccCceEEEEcchHHHHhhhhcccCcccc--cccccccccccchhHHHHHHHHHHHHHhhhccchhh
Confidence 3322222 22 3568999999999999999999988643 33344322211100 00
Q ss_pred ---------------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 178 ---------------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 178 ---------------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.......++|+++++|++|..++.+.++.+++.++. ..+++++++++||..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~ 220 (242)
T d1tqha_ 143 QIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVI 220 (242)
T ss_dssp HHHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSG
T ss_pred hHHHHHhhhhhhccchhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcCC--CCcEEEEECCCCCcC
Confidence 000124789999999999999999988777766643 357999999999987
Q ss_pred CHH-H----HHHHHHHHHH
Q 025550 231 SNE-E----LRNLESWIKT 244 (251)
Q Consensus 231 ~~~-~----~~~~~~~l~~ 244 (251)
..+ . .+.+.+||++
T Consensus 221 ~~~~~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 221 TLDQEKDQLHEDIYAFLES 239 (242)
T ss_dssp GGSTTHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHh
Confidence 633 2 3556666654
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.90 E-value=7.4e-23 Score=161.59 Aligned_cols=145 Identities=14% Similarity=0.097 Sum_probs=94.1
Q ss_pred ceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchh------hhhhhcCCCcceEEEEccCCCC
Q 025550 6 PIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEP------IKTLFTSPEFKLTKWSFPSAPN 79 (251)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~ 79 (251)
|.....+...++..+..+.+...... .+.+.++|+||++||+++++..|.. ++..|+++||.++++|+||++.
T Consensus 26 ~~e~h~v~t~DG~~l~~~ri~~~~~~-~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~ 104 (377)
T d1k8qa_ 26 PAEEYEVVTEDGYILGIDRIPYGRKN-SENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTW 104 (377)
T ss_dssp CCEEEEEECTTSEEEEEEEECSCSSC-CTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTT
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCC-CccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCC
Confidence 34445566677877777766532222 2355677999999999998888743 6778889999999999999887
Q ss_pred CCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCC
Q 025550 80 NPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRK 158 (251)
Q Consensus 80 ~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~ 158 (251)
+..+.......... ......+ .+..++.+.++.+. .. +.+++.|+||||||.+++.++..+|+.
T Consensus 105 S~~~~~~~~~~~~~-----------~~~~~~~--~~~~Dl~~~i~~i~~~~--g~~~v~lvGhS~GG~ia~~~a~~~p~~ 169 (377)
T d1k8qa_ 105 ARRNLYYSPDSVEF-----------WAFSFDE--MAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKL 169 (377)
T ss_dssp SCEESSSCTTSTTT-----------TCCCHHH--HHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHH
T ss_pred CCCCCCCCCcchhh-----------ccCCHHH--HhhhhHHHHHHHHHHHc--CCCCEEEEEecchHHHHHHHHHhhhhh
Confidence 65433221100000 0111111 12333333343332 33 356899999999999999999999988
Q ss_pred cceEEEec
Q 025550 159 LGGGAIFS 166 (251)
Q Consensus 159 ~~~~i~~~ 166 (251)
+++++++.
T Consensus 170 ~~~l~~~~ 177 (377)
T d1k8qa_ 170 AKRIKTFY 177 (377)
T ss_dssp HTTEEEEE
T ss_pred hhhceeEe
Confidence 77776654
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.89 E-value=6.3e-22 Score=152.94 Aligned_cols=178 Identities=14% Similarity=0.109 Sum_probs=127.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
++.|.|||+||+.++...|..... +...+|.++++|.||++.+.... .....++.+.+
T Consensus 32 ~~g~pvvllHG~~g~~~~~~~~~~-~l~~~~~Vi~~D~rG~G~S~~~~---------------------~~~~~~~~~~~ 89 (313)
T d1azwa_ 32 PHGKPVVMLHGGPGGGCNDKMRRF-HDPAKYRIVLFDQRGSGRSTPHA---------------------DLVDNTTWDLV 89 (313)
T ss_dssp TTSEEEEEECSTTTTCCCGGGGGG-SCTTTEEEEEECCTTSTTSBSTT---------------------CCTTCCHHHHH
T ss_pred CCCCEEEEECCCCCCccchHHHhH-HhhcCCEEEEEeccccCCCCccc---------------------cccchhHHHHH
Confidence 345678999999988888876544 44589999999999876542110 11223455666
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-------------------
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID------------------- 177 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~------------------- 177 (251)
+++.++++ ..+ .+++.|+|||+||.+++.+|.++|+++++++.+++..........
T Consensus 90 ~dl~~~~~---~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (313)
T d1azwa_ 90 ADIERLRT---HLG--VDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLN 164 (313)
T ss_dssp HHHHHHHH---HTT--CSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHHH
T ss_pred HHHHHHHH---hhc--cccceeEEecCCcHHHHHHHHHhhhceeeeeEeccccccccchhhhhhcccchhhhHHHHHHHH
Confidence 77777777 333 468999999999999999999999999999988874432110000
Q ss_pred ----------------h---------------------------------------------------------------
Q 025550 178 ----------------Q--------------------------------------------------------------- 178 (251)
Q Consensus 178 ----------------~--------------------------------------------------------------- 178 (251)
.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
T d1azwa_ 165 AIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVED 244 (313)
T ss_dssp TSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred hhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHHHhhccccccch
Confidence 0
Q ss_pred ----hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHh
Q 025550 179 ----FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTR 245 (251)
Q Consensus 179 ----~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~ 245 (251)
......++|+++++|++|.++|++.++.+.+.+.. .++++++++||... .+..+++++.+.++
T Consensus 245 ~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p~----a~~~~i~~aGH~~~ep~~~~~li~a~~~f 312 (313)
T d1azwa_ 245 QLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWPK----AQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp HHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCTT----SEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred hhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCCC----CEEEEECCCCCCCCCchHHHHHHHHHHHh
Confidence 00012578999999999999998877776665543 58899999999876 45577788877664
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.89 E-value=4.4e-22 Score=150.16 Aligned_cols=177 Identities=17% Similarity=0.233 Sum_probs=124.6
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNV 119 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l 119 (251)
|.|||+||++++...|..+++.|.+.||.++.+|+||++.+.. +....+..+.++++
T Consensus 20 ~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~-----------------------~~~~~~~~~~~~~~ 76 (273)
T d1a8sa_ 20 QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQ-----------------------PWSGNDMDTYADDL 76 (273)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCC-----------------------CSSCCSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCcccc-----------------------ccccccccchHHHH
Confidence 5688999999999999999999988999999999998765321 11223445556666
Q ss_pred HHHHHHHHHcCCCCCcEEEEEeChhHHHHH-HHHHhcCCCcceEEEeccCCCCcchh-----------hhh---------
Q 025550 120 HAMIDKEVAAGIDPNNVFVCGFSQGGALTL-ASVLLYPRKLGGGAIFSGWVPFNASL-----------IDQ--------- 178 (251)
Q Consensus 120 ~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~-~~a~~~p~~~~~~i~~~~~~~~~~~~-----------~~~--------- 178 (251)
.++++. . +.++..++|||+||.++. .++..+|+++.+++++++..+..... ...
T Consensus 77 ~~~l~~---l--~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T d1a8sa_ 77 AQLIEH---L--DLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADR 151 (273)
T ss_dssp HHHHHH---T--TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHh---c--CccceeeeeeccCCccchhhhhhhhhhccceeEEEecccccccccccccccchhhhhhhHHHHHHHHH
Confidence 666663 3 345788999999876554 45566789999999887643211100 000
Q ss_pred ---h----------------------------------------------------cccCCCCCEEEEccCCCCcccchh
Q 025550 179 ---F----------------------------------------------------TSDAKKTPILWSHGMADRTVLFEA 203 (251)
Q Consensus 179 ---~----------------------------------------------------~~~~~~~p~l~~~g~~D~~~~~~~ 203 (251)
. ....+++|+++++|++|..++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~~~~~ 231 (273)
T d1a8sa_ 152 SQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEA 231 (273)
T ss_dssp HHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTT
T ss_pred HHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEecCCCCCCCHHH
Confidence 0 002478999999999999998876
Q ss_pred cccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 204 GQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 204 ~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
++.+.+.+ ....++++++|+||....+..+++.+-|.++|+
T Consensus 232 ~~~~~~~~---~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 272 (273)
T d1a8sa_ 232 SGIASAAL---VKGSTLKIYSGAPHGLTDTHKDQLNADLLAFIK 272 (273)
T ss_dssp THHHHHHH---STTCEEEEETTCCSCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHh---CCCCEEEEECCCCCchHHhCHHHHHHHHHHHcC
Confidence 55554444 224688999999999887777777666666664
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.88 E-value=1.6e-22 Score=144.75 Aligned_cols=166 Identities=14% Similarity=0.095 Sum_probs=113.1
Q ss_pred cEEEEEecCCCCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 40 NFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..||++||++++... +..+++.+++.||.++.+|+|+.+.. ...+.++
T Consensus 2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~~------------------------------~~~~~~~ 51 (186)
T d1uxoa_ 2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQP------------------------------RLEDWLD 51 (186)
T ss_dssp CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTSC------------------------------CHHHHHH
T ss_pred CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCcc------------------------------hHHHHHH
Confidence 469999999988655 56688999999999999999865321 1222233
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC--cceEEEeccCCCCcchhhhhh----------cccCCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK--LGGGAIFSGWVPFNASLIDQF----------TSDAKK 185 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~--~~~~i~~~~~~~~~~~~~~~~----------~~~~~~ 185 (251)
.+...+ ....++++|+||||||.+++.++.++++. +.+++..+++........... ......
T Consensus 52 ~l~~~~------~~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (186)
T d1uxoa_ 52 TLSLYQ------HTLHENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESA 125 (186)
T ss_dssp HHHTTG------GGCCTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHHHHHE
T ss_pred HHHHHH------hccCCCcEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhhhhhhhhcccccccccccCC
Confidence 333322 23457899999999999999999999864 344555555443222111110 011356
Q ss_pred CCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCCHHH---HHHHHHHHHHhh
Q 025550 186 TPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSISNEE---LRNLESWIKTRM 246 (251)
Q Consensus 186 ~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~~~l 246 (251)
.|+++++|++|+++|++.++.+++.+. .++++++++||.+..+. ...+.+.|+.+|
T Consensus 126 ~p~lvi~g~~D~~vp~~~~~~l~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~ 184 (186)
T d1uxoa_ 126 KHRAVIASKDDQIVPFSFSKDLAQQID-----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYF 184 (186)
T ss_dssp EEEEEEEETTCSSSCHHHHHHHHHHTT-----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHcC-----CEEEEeCCCCCcCccccCcccHHHHHHHHHHH
Confidence 899999999999999998887777662 48999999999765432 234444444444
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.87 E-value=9.4e-21 Score=144.94 Aligned_cols=178 Identities=15% Similarity=0.124 Sum_probs=127.2
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
..|.|||+||++++...|..+...+. .+|.++++|+||++.+... ............+
T Consensus 33 ~g~pvvllHG~~~~~~~w~~~~~~l~-~~~~vi~~D~rG~G~S~~~---------------------~~~~~~~~~~~~~ 90 (313)
T d1wm1a_ 33 NGKPAVFIHGGPGGGISPHHRQLFDP-ERYKVLLFDQRGCGRSRPH---------------------ASLDNNTTWHLVA 90 (313)
T ss_dssp TSEEEEEECCTTTCCCCGGGGGGSCT-TTEEEEEECCTTSTTCBST---------------------TCCTTCSHHHHHH
T ss_pred CCCeEEEECCCCCcccchHHHHHHhh-cCCEEEEEeCCCccccccc---------------------ccccccchhhHHH
Confidence 34678999999999999999887665 6999999999987654211 0112233444455
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-------------------
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------------- 178 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------------- 178 (251)
++...++ .. +..++.++|||+||.++..++..+|+.+.+++.++............
T Consensus 91 d~~~~~~---~~--~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (313)
T d1wm1a_ 91 DIERLRE---MA--GVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSI 165 (313)
T ss_dssp HHHHHHH---HT--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHHTT
T ss_pred HHHhhhh---cc--CCCcceeEeeecCCchhhHHHHHHhhhheeeeecccccccccccccccccccchhhhhhhhhhhhh
Confidence 5555554 33 45689999999999999999999999999999887644211000000
Q ss_pred --------------------------------------------------------------------------------
Q 025550 179 -------------------------------------------------------------------------------- 178 (251)
Q Consensus 179 -------------------------------------------------------------------------------- 178 (251)
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
T d1wm1a_ 166 LSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDDQL 245 (313)
T ss_dssp SCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTTHH
T ss_pred hhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhhhhhhhcccccchhh
Confidence
Q ss_pred --hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HHHHHHHHHHHHHhh
Q 025550 179 --FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NEELRNLESWIKTRM 246 (251)
Q Consensus 179 --~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l 246 (251)
......++|+++++|++|.+++.+.++.+.+.+.. .++++++++||.+. .+..+++++++.++.
T Consensus 246 ~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p~----a~~~~i~~aGH~~~eP~~~~~lv~a~~~f~ 312 (313)
T d1wm1a_ 246 LRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE----AELHIVEGAGHSYDEPGILHQLMIATDRFA 312 (313)
T ss_dssp HHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT----SEEEEETTCCSSTTSHHHHHHHHHHHHHHT
T ss_pred hhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCCC----CEEEEECCCCCCcCCchHHHHHHHHHHHhc
Confidence 00012578999999999999999887776666643 58999999999875 345677888887753
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.87 E-value=9.6e-22 Score=146.82 Aligned_cols=175 Identities=15% Similarity=0.178 Sum_probs=114.1
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
+...|+|||+||++++...|..+++.|.+.||.++++|+||++.+.... ..........
T Consensus 13 ~~~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~---------------------~~~~~~~~~~ 71 (264)
T d1r3da_ 13 TARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERH---------------------CDNFAEAVEM 71 (264)
T ss_dssp BTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC----------------------------CHHHHH
T ss_pred CCCCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccc---------------------ccccchhhhh
Confidence 3456899999999999999999999999899999999999886532110 0011111111
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcc--hhhhh---------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNA--SLIDQ--------------- 178 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~--~~~~~--------------- 178 (251)
...+ .. ......++++++|||+||.+++.++.++|+.+.+++.+........ .....
T Consensus 72 ~~~~---~~---~~~~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (264)
T d1r3da_ 72 IEQT---VQ---AHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFS 145 (264)
T ss_dssp HHHH---HH---TTCCTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhc---cc---ccccccCceeeeeecchHHHHHHHHHhCchhccccccccccCCCccccchhhhhhhhhhhhhhhhhhh
Confidence 1111 11 2334567899999999999999999999998888776543221100 00000
Q ss_pred ----------------h----------------------------------------cccCCCCCEEEEccCCCCcccch
Q 025550 179 ----------------F----------------------------------------TSDAKKTPILWSHGMADRTVLFE 202 (251)
Q Consensus 179 ----------------~----------------------------------------~~~~~~~p~l~~~g~~D~~~~~~ 202 (251)
. .....++|+++++|++|..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~l~i~G~~D~~~~-- 223 (264)
T d1r3da_ 146 QQPIEHVLSDWYQQAVFSSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-- 223 (264)
T ss_dssp HSCHHHHHHHHTTSGGGTTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH--
T ss_pred hhhhhhhhhhhhhhhhhcccchHHHHHHHHHHhhhhhhhhHHhhhhccccccccchhhhhccCcceEEEEeCCcHHHH--
Confidence 0 001478999999999996532
Q ss_pred hcccchHHHHhcCCeeEEEEeCCCCCCCCHHHHHHHHHHHHHhhc
Q 025550 203 AGQAGPPFLEQAGISCEFKAYPGLGHSISNEELRNLESWIKTRMS 247 (251)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 247 (251)
.+.+ . ...++++++|+||....+..+++.+.|.++|+
T Consensus 224 ---~~~~---~--~~~~~~~i~~~gH~~~~e~P~~~~~~i~~fl~ 260 (264)
T d1r3da_ 224 ---QLAE---S--SGLSYSQVAQAGHNVHHEQPQAFAKIVQAMIH 260 (264)
T ss_dssp ---HHHH---H--HCSEEEEETTCCSCHHHHCHHHHHHHHHHHHH
T ss_pred ---HHHh---c--CCCeEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 1111 1 13588999999999887766666555555553
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.87 E-value=8.3e-22 Score=152.64 Aligned_cols=186 Identities=22% Similarity=0.263 Sum_probs=126.6
Q ss_pred CCCCccEEEEEecCCC---CCCCchhhhhhhc-CCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLGD---SGPANEPIKTLFT-SPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
.+.+.|+||++||+|. +...+..++..++ +.|+.++.+||+.+|+.+. +....
T Consensus 74 ~~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~~~-----------------------~~~~~ 130 (317)
T d1lzla_ 74 TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTF-----------------------PGPVN 130 (317)
T ss_dssp CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSCT-----------------------THHHH
T ss_pred CCCCCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccccc-----------------------ccccc
Confidence 3457799999999773 3344445555554 4699999999998776321 22345
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC----CcceEEEeccCCCCcchhh----------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR----KLGGGAIFSGWVPFNASLI---------- 176 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----~~~~~i~~~~~~~~~~~~~---------- 176 (251)
+..+++.++.+... +.++|+++|+|+|+|.||.+++.++...++ .....+.............
T Consensus 131 d~~~~~~~~~~~~~---~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 207 (317)
T d1lzla_ 131 DCYAALLYIHAHAE---ELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTNFVDTPL 207 (317)
T ss_dssp HHHHHHHHHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHHHCSSCSS
T ss_pred ccccchhHHHHHHH---HhCCCHHHEEEEEeccccHHHHHHHhhhhhcccccccccccccccccccccccccccccccch
Confidence 55566666655554 678899999999999999999988876321 1222332222111100000
Q ss_pred ------------------------------hh--hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 177 ------------------------------DQ--FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 177 ------------------------------~~--~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
.. ........|+++++|+.|.+ .++++.+.++|++.|+++++++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l--~~~~~~~~~~L~~~G~~v~~~~~~ 285 (317)
T d1lzla_ 208 WHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL--RDEGIEYALRLLQAGVSVELHSFP 285 (317)
T ss_dssp CCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT--HHHHHHHHHHHHHTTCCEEEEEET
T ss_pred hhhhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC--HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 00 00012347999999999965 567889999999999999999999
Q ss_pred CCCCCCC--------HHHHHHHHHHHHHhhcC
Q 025550 225 GLGHSIS--------NEELRNLESWIKTRMSC 248 (251)
Q Consensus 225 g~~H~~~--------~~~~~~~~~~l~~~l~~ 248 (251)
|++|.+. .+..+++++||+++|++
T Consensus 286 g~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lrs 317 (317)
T d1lzla_ 286 GTFHGSALVATAAVSERGAAEALTAIRRGLRS 317 (317)
T ss_dssp TCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC
T ss_pred cCccCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence 9999763 23467899999999874
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.87 E-value=7.4e-20 Score=133.86 Aligned_cols=201 Identities=15% Similarity=0.150 Sum_probs=137.9
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecC---CCCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCC
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGL---GDSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~---~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g 87 (251)
|......++..+.. +.....+++|++||. |++..+ ...+++.+.+.|+.++++|||+.+.+...
T Consensus 5 i~g~~G~Le~~~~~-------~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~G~---- 73 (218)
T d2i3da1 5 FNGPAGRLEGRYQP-------SKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE---- 73 (218)
T ss_dssp EEETTEEEEEEEEC-------CSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC----
T ss_pred EeCCCccEEEEEeC-------CCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCccc----
Confidence 33444466665443 344566899999984 444333 33477789999999999999987664211
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
| +..... .++....++.+........++.++|+|+||.++..++.+.+. ..+++++.+
T Consensus 74 -----~------------~~~~~e----~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~~~~-~~~~~~~~~ 131 (218)
T d2i3da1 74 -----F------------DHGAGE----LSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAP 131 (218)
T ss_dssp -----C------------CSSHHH----HHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESC
T ss_pred -----c------------ccchhH----HHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHhhcc-ccceeeccc
Confidence 1 111112 222223333322334445689999999999999999888774 666777766
Q ss_pred CCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhc-CCeeEEEEeCCCCCCCCH---HHHHHHHHHHH
Q 025550 168 WVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQA-GISCEFKAYPGLGHSISN---EELRNLESWIK 243 (251)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~-~~~~~~~~~~g~~H~~~~---~~~~~~~~~l~ 243 (251)
....... ........|.++++|+.|.+++.+....+.+.++.. +...++++++|++|+|.. +..+.+.+||+
T Consensus 132 ~~~~~~~----~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l~ 207 (218)
T d2i3da1 132 QPNTYDF----SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLD 207 (218)
T ss_dssp CTTTSCC----TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHH
T ss_pred cccccch----hhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHHH
Confidence 5443321 112335789999999999999999988888888764 556899999999999873 34688999999
Q ss_pred HhhcCCC
Q 025550 244 TRMSCSS 250 (251)
Q Consensus 244 ~~l~~~~ 250 (251)
++|....
T Consensus 208 ~~l~~~~ 214 (218)
T d2i3da1 208 RRLNGEL 214 (218)
T ss_dssp HHHTTCS
T ss_pred HhcCCCC
Confidence 9997653
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.86 E-value=1.5e-20 Score=141.11 Aligned_cols=188 Identities=16% Similarity=0.111 Sum_probs=121.3
Q ss_pred CCCCccEEEEEecCCCCCCCchh-------hhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGDSGPANEP-------IKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSP 106 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~~~-------~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~ 106 (251)
.+++.|+|+++||.+++...+.. ... .....+...+....+.... ..+. ...
T Consensus 48 ~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---------~~~ 107 (255)
T d1jjfa_ 48 KDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA-----------AGPG---------IAD 107 (255)
T ss_dssp TTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC-----------CCTT---------CSC
T ss_pred CCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeeccccc-----------cccc---------ccc
Confidence 56788999999999987766543 111 2222233333333221111 0000 001
Q ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh----hccc
Q 025550 107 KDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ----FTSD 182 (251)
Q Consensus 107 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~----~~~~ 182 (251)
.........++++...++......++.++++++|+|+||.+++.++.++|+.+++++++|+........... ....
T Consensus 108 ~~~~~~~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~~~~~~~~~~~~~~~~ 187 (255)
T d1jjfa_ 108 GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERLFPDGGKAAR 187 (255)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCHHHHCTTTTHHHH
T ss_pred cccchHHHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCCcccccccccHHHHhh
Confidence 112223344555555555422334678899999999999999999999999999999999877554322110 1112
Q ss_pred CCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHHHH
Q 025550 183 AKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWIKT 244 (251)
Q Consensus 183 ~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 244 (251)
....|+++.+|++|..++. .+.+.+.|++.|+++++.++++++|.+. .+.+.+++.|+++
T Consensus 188 ~~~~~~~i~~G~~D~~~~~--~~~~~~~L~~~g~~~~~~~~~~ggH~~~~W~~~l~~fl~~~~~ 249 (255)
T d1jjfa_ 188 EKLKLLFIACGTNDSLIGF--GQRVHEYCVANNINHVYWLIQGGGHDFNVWKPGLWNFLQMADE 249 (255)
T ss_dssp HHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTCCCEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred ccCCcceEEeCCCCCCchH--HHHHHHHHHHCCCCEEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 3568999999999998774 5689999999999999999999999864 3445555544443
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.85 E-value=2e-20 Score=142.21 Aligned_cols=131 Identities=14% Similarity=-0.028 Sum_probs=90.3
Q ss_pred cccceeeEEEeeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCc
Q 025550 3 LTKPIVLFTVILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 82 (251)
=++|......+..++..+..... + +.|.|||+||++++...|..+++.|+ .+|.++++|+||++.+..
T Consensus 3 ~~~p~~~~~fi~~~g~~i~y~~~---------G--~g~~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~Dl~G~G~S~~ 70 (298)
T d1mj5a_ 3 GAKPFGEKKFIEIKGRRMAYIDE---------G--TGDPILFQHGNPTSSYLWRNIMPHCA-GLGRLIACDLIGMGDSDK 70 (298)
T ss_dssp CSSCSSCCEEEEETTEEEEEEEE---------S--CSSEEEEECCTTCCGGGGTTTGGGGT-TSSEEEEECCTTSTTSCC
T ss_pred CCcCCCCCEEEEECCEEEEEEEE---------c--CCCcEEEECCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCCCCCCC
Confidence 35776666666677777653221 1 23679999999999999999999886 568999999998765421
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceE
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGG 162 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~ 162 (251)
.... ...........+.+...+. .....+++.++|||+||.+++.++.++|+.+.++
T Consensus 71 ~~~~-------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l 127 (298)
T d1mj5a_ 71 LDPS-------------------GPERYAYAEHRDYLDALWE----ALDLGDRVVLVVHDWGSALGFDWARRHRERVQGI 127 (298)
T ss_dssp CSSC-------------------STTSSCHHHHHHHHHHHHH----HTTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEE
T ss_pred Cccc-------------------cccccccchhhhhhccccc----cccccccCeEEEecccchhHHHHHHHHHhhhhee
Confidence 1100 1111222223333333333 2234578999999999999999999999999999
Q ss_pred EEeccC
Q 025550 163 AIFSGW 168 (251)
Q Consensus 163 i~~~~~ 168 (251)
+.+++.
T Consensus 128 ~~~~~~ 133 (298)
T d1mj5a_ 128 AYMEAI 133 (298)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 888763
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.85 E-value=1.2e-20 Score=145.48 Aligned_cols=167 Identities=20% Similarity=0.257 Sum_probs=119.1
Q ss_pred CCccEEEEEecCCC---CCCCchhhhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 37 MARNFILWLHGLGD---SGPANEPIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 37 ~~~~~vv~~HG~~~---~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
++.|+||++||+|. +...+..++..+ ++.|+.++.++|+.+|+.+. +....+.
T Consensus 77 ~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~~-----------------------p~~~~d~ 133 (311)
T d1jjia_ 77 PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKF-----------------------PAAVYDC 133 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCT-----------------------THHHHHH
T ss_pred CCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEecccccccccc-----------------------chhhhhh
Confidence 34599999999874 344455565544 55699999999998876421 2234555
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccCCCCcchhhhh----------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGWVPFNASLIDQ---------- 178 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~~~~~~~~~~~---------- 178 (251)
..++.++.+..+ +.++|++||+|+|+|.||.+++.++... .....+.++++++..........
T Consensus 134 ~~a~~~~~~~~~---~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~ 210 (311)
T d1jjia_ 134 YDATKWVAENAE---ELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWIL 210 (311)
T ss_dssp HHHHHHHHHTHH---HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSSCSSC
T ss_pred hhhhhHHHHhHH---HhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeeccCcccccccccccccc
Confidence 566666665554 6788899999999999999988776543 23467778888866543211000
Q ss_pred ---------------------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC
Q 025550 179 ---------------------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS 231 (251)
Q Consensus 179 ---------------------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~ 231 (251)
.......+|+++++|+.|.++ .++..+.++|++.|+++++++|+|++|.|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l~--d~~~~~~~~L~~~Gv~v~~~~~~g~~H~F~ 288 (311)
T d1jjia_ 211 DQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLR--DEGEVFGQMLRRAGVEASIVRYRGVLHGFI 288 (311)
T ss_dssp CHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEETTGG
T ss_pred cHHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCCh--HHHHHHHHHHHHCCCCEEEEEECCCCCccc
Confidence 001124569999999999764 477889999999999999999999999763
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=3.5e-20 Score=139.48 Aligned_cols=166 Identities=12% Similarity=0.123 Sum_probs=112.8
Q ss_pred CCCCccEEEEEecCCCC-----CCCchh----hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGDS-----GPANEP----IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASS 105 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~-----~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~ 105 (251)
.++++|+||++||+|.. ...|.. +++.+.+.|+.++.+||+.+|..+.
T Consensus 27 ~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~~----------------------- 83 (263)
T d1vkha_ 27 SQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEITN----------------------- 83 (263)
T ss_dssp CTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSCT-----------------------
T ss_pred CCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchhh-----------------------
Confidence 45678999999997632 223333 4456778999999999997765210
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCC-----------------cceEEEeccC
Q 025550 106 PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRK-----------------LGGGAIFSGW 168 (251)
Q Consensus 106 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~-----------------~~~~i~~~~~ 168 (251)
+....+..+++.++ .+ . .+.++++|+|||+||.+++.++...++. +.+.+..++.
T Consensus 84 ~~~~~d~~~~~~~l---~~---~--~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T d1vkha_ 84 PRNLYDAVSNITRL---VK---E--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGI 155 (263)
T ss_dssp THHHHHHHHHHHHH---HH---H--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCC
T ss_pred hHHHHhhhhhhhcc---cc---c--ccccceeeeccCcHHHHHHHHHHhccCcccccccccccccccccccccccccccc
Confidence 11223333333333 33 2 2567999999999999999988765432 3444444443
Q ss_pred CCCcchh---------hh-hh--------------------cccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCee
Q 025550 169 VPFNASL---------ID-QF--------------------TSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISC 218 (251)
Q Consensus 169 ~~~~~~~---------~~-~~--------------------~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 218 (251)
....... .. .+ ......+|+++++|++|.++|++++..++++|++.|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~~~ 235 (263)
T d1vkha_ 156 YSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSF 235 (263)
T ss_dssp CCHHHHHHHCGGGHHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCE
T ss_pred ccchhhhhhccccchhhhcccccccccccccccccCccccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCCCE
Confidence 3211100 00 00 011367899999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCC
Q 025550 219 EFKAYPGLGHSIS 231 (251)
Q Consensus 219 ~~~~~~g~~H~~~ 231 (251)
++++++|++|...
T Consensus 236 ~~~~~~~~~H~~~ 248 (263)
T d1vkha_ 236 KLYLDDLGLHNDV 248 (263)
T ss_dssp EEEEECCCSGGGG
T ss_pred EEEEECCCCchhh
Confidence 9999999999654
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.83 E-value=2.2e-20 Score=143.92 Aligned_cols=185 Identities=15% Similarity=0.219 Sum_probs=124.4
Q ss_pred CCCCccEEEEEecCC---CCCCCchhhhhhhcCCC-cceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLG---DSGPANEPIKTLFTSPE-FKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
.+.+.|+||++||+| ++...+..++..++..+ +.++.++|+..+..+. +....
T Consensus 68 ~~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~~-----------------------p~~~~ 124 (308)
T d1u4na_ 68 VEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKF-----------------------PAAVE 124 (308)
T ss_dssp CCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSCT-----------------------THHHH
T ss_pred cCCCCCEEEEEecCeeeeeccccccchhhhhhhccccccccccccccccccc-----------------------ccccc
Confidence 345789999999987 34555666666555555 4567789987655311 22334
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCCCCcchhhh---------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWVPFNASLID--------- 177 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~~~~~~~~~--------- 177 (251)
|..+++.++.+... +.++|+++|+++|+|.||.+++.++.... ..+.+...+++..........
T Consensus 125 D~~~~~~~l~~~~~---~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (308)
T d1u4na_ 125 DAYDALQWIAERAA---DFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENAEG 201 (308)
T ss_dssp HHHHHHHHHHTTTG---GGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTSCCHHHHHTSSS
T ss_pred hhhhhhhHHHHhHH---hcCCCcceEEEeeccccchhHHHHHHhhhhccCCCcccccccccccccccccccchhhhcccc
Confidence 55555555544333 56788999999999999999988876543 235566666654332110000
Q ss_pred -----------------------------hhcc-cCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCC
Q 025550 178 -----------------------------QFTS-DAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLG 227 (251)
Q Consensus 178 -----------------------------~~~~-~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~ 227 (251)
.... .....|+++++|+.|.++ .+++.++++|++.|+++++++++|.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~~v~~~~~~g~~ 279 (308)
T d1u4na_ 202 YLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGVKVEIENFEDLI 279 (308)
T ss_dssp SSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEEEEEE
T ss_pred ccccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHHHHHHHHCCCCEEEEEECCCC
Confidence 0000 012358999999999765 47789999999999999999999999
Q ss_pred CCCC---------HHHHHHHHHHHHHhhc
Q 025550 228 HSIS---------NEELRNLESWIKTRMS 247 (251)
Q Consensus 228 H~~~---------~~~~~~~~~~l~~~l~ 247 (251)
|.+. .+..+++.+||++.|.
T Consensus 280 Hgf~~~~~~~~~a~~~~~~~~~fl~~~La 308 (308)
T d1u4na_ 280 HGFAQFYSLSPGATKALVRIAEKLRDALA 308 (308)
T ss_dssp TTGGGGTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred EeCcccCCCCHHHHHHHHHHHHHHHHhhC
Confidence 9763 1335778888887763
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.83 E-value=6e-20 Score=136.99 Aligned_cols=206 Identities=16% Similarity=0.109 Sum_probs=131.6
Q ss_pred ceEEEEEecCCCCCCCCCCCCCccEEEEEecCCC--CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccc
Q 025550 17 TIIFILFFWPSSSYSHEQNPMARNFILWLHGLGD--SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWF 94 (251)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~ 94 (251)
+.....++..|+.+ ..++.|+||++||.+. ....+..+.+..++.....+++..+.... ..+.
T Consensus 26 g~~~~~~v~~P~~~----~~~~~Pvvv~lhG~~~~~~~~~~~~l~~l~~~~~~~~~i~v~~~~~~-----------~~~~ 90 (246)
T d3c8da2 26 KNSRRVWIFTTGDV----TAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAID-----------TTHR 90 (246)
T ss_dssp TEEEEEEEEEC---------CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCS-----------HHHH
T ss_pred CCEEEEEEEECCCC----CCCCCCEEEEeCCcchhccCcHHHHHHHHHHhCCCCceEEeeccccc-----------cccc
Confidence 44555555443332 2356899999999652 22223333334444444445555442211 0111
Q ss_pred cccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch
Q 025550 95 DIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS 174 (251)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~ 174 (251)
.... ...........+++...++......++.++++++|+|+||..++.++.++|+.+++++++||.......
T Consensus 91 ~~~~-------~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~ 163 (246)
T d3c8da2 91 AHEL-------PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 163 (246)
T ss_dssp HHHS-------SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred cccc-------CccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccC
Confidence 1000 112222333345555555543344567889999999999999999999999999999999996654322
Q ss_pred h----------hhhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC--HHHHHHHHHHH
Q 025550 175 L----------IDQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS--NEELRNLESWI 242 (251)
Q Consensus 175 ~----------~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 242 (251)
. ...........|+++.+|+.|..+ ...++.+.++|++.|.++++++++| ||.+. .+.+.+.+.||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~D~~~-~~~~~~l~~~L~~~g~~~~~~~~~G-gH~~~~W~~~l~~~l~~l 241 (246)
T d3c8da2 164 GGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHDALCWRGGLMQGLIDL 241 (246)
T ss_dssp TSSSCCHHHHHHHTTSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSCHHHHHHHHHHHHHHH
T ss_pred CccchHHHHHHhhhhhhhccCCCeEEEecCCCcch-hHHHHHHHHHHHHCCCCEEEEEeCC-CCChHHHHHHHHHHHHHH
Confidence 1 111223347789999999999866 4677899999999999999999998 89865 66777777777
Q ss_pred HHhh
Q 025550 243 KTRM 246 (251)
Q Consensus 243 ~~~l 246 (251)
-+.|
T Consensus 242 ~~~~ 245 (246)
T d3c8da2 242 WQPL 245 (246)
T ss_dssp HGGG
T ss_pred HHhh
Confidence 6654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.82 E-value=9e-19 Score=132.64 Aligned_cols=215 Identities=11% Similarity=0.010 Sum_probs=135.0
Q ss_pred eeecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCC--chh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCc
Q 025550 13 ILSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPA--NEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAV 89 (251)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~--~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~ 89 (251)
-+.++..+..++..|..+ ..+++.|+||++||+++.... +.. ....+...++.+...++......
T Consensus 13 ~s~DG~~i~~~l~~P~~~---~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 80 (280)
T d1qfma2 13 PSKDGTKIPMFIVHKKGI---KLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEY--------- 80 (280)
T ss_dssp ECTTSCEEEEEEEEETTC---CCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTT---------
T ss_pred ECCCCCEEEEEEEEcCCC---CCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeecccccccccc---------
Confidence 345778888877765433 256788999999997544333 222 22344445555555554432211
Q ss_pred CCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 90 MPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 90 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..+.... ..........+.......... +...+...++++|.|.||..+...+...++.+++++...+.
T Consensus 81 -~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~ 150 (280)
T d1qfma2 81 -GETWHKG---------GILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGV 150 (280)
T ss_dssp -HHHHHHT---------TSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCC
T ss_pred -chhhhhc---------ccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccc
Confidence 0000000 011111111122222222111 45567788999999999999999999999888888888876
Q ss_pred CCCcchhhhh-----------------------h------c----ccCCCCCEEEEccCCCCcccchhcccchHHHHh--
Q 025550 169 VPFNASLIDQ-----------------------F------T----SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQ-- 213 (251)
Q Consensus 169 ~~~~~~~~~~-----------------------~------~----~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~-- 213 (251)
.......... . . ......|+|++||+.|..||+.++++++++|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g 230 (280)
T d1qfma2 151 MDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 230 (280)
T ss_dssp CCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHT
T ss_pred cchhhhccccccccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhh
Confidence 5432211000 0 0 011345899999999999999999999999965
Q ss_pred -----cCCeeEEEEeCCCCCCCCH------HHHHHHHHHHHHhhcCC
Q 025550 214 -----AGISCEFKAYPGLGHSISN------EELRNLESWIKTRMSCS 249 (251)
Q Consensus 214 -----~~~~~~~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~~ 249 (251)
.+.++++++++|+||.+.. +...++.+||.++|+..
T Consensus 231 ~~~~~~~~~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~ 277 (280)
T d1qfma2 231 GRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNID 277 (280)
T ss_dssp TTSTTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhhcCCCcEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 3778999999999998741 22456889999999743
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.8e-20 Score=140.48 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=78.1
Q ss_pred cEEEEEecCCCCCCCchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 40 NFILWLHGLGDSGPANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 40 ~~vv~~HG~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
|.||++||++++...|..+++.|.+. +|.++++|+||++.+. .....++.+.++
T Consensus 3 ~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~------------------------~~~~~~~~~~~~ 58 (268)
T d1pjaa_ 3 KPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESL------------------------RPLWEQVQGFRE 58 (268)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGG------------------------SCHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCC------------------------CccccCHHHHHH
Confidence 34778999999999999999988754 7999999999775431 112345666667
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEeccC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSGW 168 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~~ 168 (251)
++.++++. . + +++.|+||||||.+++.+|.++|+ ++++++++++.
T Consensus 59 ~l~~~l~~---l--~-~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 59 AVVPIMAK---A--P-QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSP 104 (268)
T ss_dssp HHHHHHHH---C--T-TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCC
T ss_pred HHHHHHhc---c--C-CeEEEEccccHHHHHHHHHHHCCccccceEEEECCC
Confidence 77666662 2 3 789999999999999999999998 59999988763
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.82 E-value=1e-19 Score=136.40 Aligned_cols=158 Identities=11% Similarity=0.057 Sum_probs=110.9
Q ss_pred CCCCccEEEEEecCCC---CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLGD---SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.+++.|+|||+||++. +...+..++..|+++|+.++.++||.+|...
T Consensus 58 ~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~------------------------------ 107 (261)
T d2pbla1 58 EGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR------------------------------ 107 (261)
T ss_dssp SSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC------------------------------
T ss_pred CCCCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccccc------------------------------
Confidence 4457799999999763 4455667888899999999999999765421
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC------CCcceEEEeccCCCCcchhhhh-------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP------RKLGGGAIFSGWVPFNASLIDQ------- 178 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p------~~~~~~i~~~~~~~~~~~~~~~------- 178 (251)
....++++.+.+..+.+ +. +++|+|+|||.||+++.+++.... ..+++++.++|...........
T Consensus 108 ~p~~~~d~~~a~~~~~~-~~-~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (261)
T d2pbla1 108 ISEITQQISQAVTAAAK-EI-DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTSMNEKFKM 185 (261)
T ss_dssp HHHHHHHHHHHHHHHHH-HS-CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGSTTHHHHCC
T ss_pred CchhHHHHHHHHHHHHh-cc-cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhhhcccccC
Confidence 11222333333332221 12 479999999999999987765432 2478899999876654321110
Q ss_pred -----------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 179 -----------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 179 -----------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
.......+|+++++|++|..++.++++.+.+.++. +.++++|.+|+
T Consensus 186 ~~~~~~~~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~~-----~~~~~~~~~HF 242 (261)
T d2pbla1 186 DADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWDA-----DHVIAFEKHHF 242 (261)
T ss_dssp CHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHTC-----EEEEETTCCTT
T ss_pred CHHHHHHhCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhCC-----CceEeCCCCch
Confidence 11234789999999999998888888888888853 67889999994
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.81 E-value=2.8e-18 Score=130.75 Aligned_cols=200 Identities=11% Similarity=0.084 Sum_probs=134.2
Q ss_pred CCCccEEEEEecCCCCC--CCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 36 PMARNFILWLHGLGDSG--PANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~--~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..+.|+|+++||.++.. ..|.. +.+.+.+.++.++.++....... ..|+..... ........
T Consensus 31 ~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~---~~~~~~~~ 97 (288)
T d1sfra_ 31 GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFY----------SDWYQPACG---KAGCQTYK 97 (288)
T ss_dssp STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTT----------CBCSSCEEE---TTEEECCB
T ss_pred CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCC----------ccccCcccc---cccccchh
Confidence 46889999999977543 33333 45577788887777765433211 111110000 00011122
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh------------
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------ 178 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------ 178 (251)
.....++++...+++ +..+++++++|+|+|+||.+|+.+++++|+.++++++++|...........
T Consensus 98 ~~~~~~~el~~~i~~--~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
T d1sfra_ 98 WETFLTSELPGWLQA--NRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGY 175 (288)
T ss_dssp HHHHHHTHHHHHHHH--HHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHhHHHHHH--hcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCcccccccccchhhhhhhhhcccc
Confidence 333445666666654 567889999999999999999999999999999999999976533211000
Q ss_pred -----h-----------c-------ccCCCCCEEEEccCCCCcccc--------------hhcccchHHHHhcCCeeEEE
Q 025550 179 -----F-----------T-------SDAKKTPILWSHGMADRTVLF--------------EAGQAGPPFLEQAGISCEFK 221 (251)
Q Consensus 179 -----~-----------~-------~~~~~~p~l~~~g~~D~~~~~--------------~~~~~~~~~l~~~~~~~~~~ 221 (251)
. . ....+.++++.+|+.|...+. ++++.+.+.|++.|++.++.
T Consensus 176 ~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~e~~~~~~~~~l~~~l~~~g~~~~~~ 255 (288)
T d1sfra_ 176 KASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGGHNGVF 255 (288)
T ss_dssp CHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred cHhhhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccccchhHHHHHHHHHHHHHHHHHCCCCeEEE
Confidence 0 0 011357889999999876663 45677899999999999998
Q ss_pred EeCCC-CCCCC--HHHHHHHHHHHHHhhcCCC
Q 025550 222 AYPGL-GHSIS--NEELRNLESWIKTRMSCSS 250 (251)
Q Consensus 222 ~~~g~-~H~~~--~~~~~~~~~~l~~~l~~~~ 250 (251)
++++. +|.+. .+.+.+...||.+.|...+
T Consensus 256 ~~~~~G~H~w~~w~~~l~~~l~~l~~alg~~~ 287 (288)
T d1sfra_ 256 DFPDSGTHSWEYWGAQLNAMKPDLQRALGATP 287 (288)
T ss_dssp ECCSCCCSSHHHHHHHHHHTHHHHHHHHTCCC
T ss_pred EECCCCccChhHHHHHHHHHHHHHHHhcCCCC
Confidence 88854 69853 5667888899999987654
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.81 E-value=1.3e-18 Score=136.52 Aligned_cols=186 Identities=19% Similarity=0.169 Sum_probs=122.5
Q ss_pred CCCCccEEEEEecCCCC---CCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 35 NPMARNFILWLHGLGDS---GPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~---~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
.+.+.|+||++||+|.. ... +..+++.+++.|+.++.+||+.++... . .. ..+...
T Consensus 102 ~~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~~-----p--e~------------~~p~~l 162 (358)
T d1jkma_ 102 VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAE-----G--HH------------PFPSGV 162 (358)
T ss_dssp CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETT-----E--EC------------CTTHHH
T ss_pred CCCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeeccccccc-----c--cC------------CCchhh
Confidence 34578999999998753 222 334677888899999999999763210 0 00 012234
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----CCCcceEEEeccCCCCcchhhh-------
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----PRKLGGGAIFSGWVPFNASLID------- 177 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~i~~~~~~~~~~~~~~------- 177 (251)
.|+.+++.++.+... . ++.++|+|+|.|.||.+++.++... ...+.+++...++.........
T Consensus 163 ~D~~~a~~wl~~~~~---~--~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 237 (358)
T d1jkma_ 163 EDCLAAVLWVDEHRE---S--LGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRLTEL 237 (358)
T ss_dssp HHHHHHHHHHHHTHH---H--HTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHHHHC
T ss_pred HHHHHHHHHHHHhcc---c--cCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceeccccCccchhhcccc
Confidence 555555555554333 2 3578999999999999998776542 2346788888775543211000
Q ss_pred ---------------------hhc-------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCe
Q 025550 178 ---------------------QFT-------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGIS 217 (251)
Q Consensus 178 ---------------------~~~-------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~ 217 (251)
.+. ....-.|+++++|+.|.+. ++++.++++|++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~--~e~~~~~~~L~~aGv~ 315 (358)
T d1jkma_ 238 PSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLR--DEGIAFARRLARAGVD 315 (358)
T ss_dssp THHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTCC
T ss_pred cchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCCH--HHHHHHHHHHHHCCCc
Confidence 000 0013469999999999664 5778999999999999
Q ss_pred eEEEEeCCCCCCCC-------HHH----HHHHHHHHHHhh
Q 025550 218 CEFKAYPGLGHSIS-------NEE----LRNLESWIKTRM 246 (251)
Q Consensus 218 ~~~~~~~g~~H~~~-------~~~----~~~~~~~l~~~l 246 (251)
+++++++|.+|.+. .+. .+.+..|+.++.
T Consensus 316 v~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~~ 355 (358)
T d1jkma_ 316 VAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 355 (358)
T ss_dssp EEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999752 122 455666665543
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.80 E-value=7.2e-19 Score=124.63 Aligned_cols=166 Identities=17% Similarity=0.104 Sum_probs=110.0
Q ss_pred EEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHH
Q 025550 41 FILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVH 120 (251)
Q Consensus 41 ~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~ 120 (251)
.|||+||++++...|..+++.|.++||.++.+++++..... ...........+.+.
T Consensus 4 PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~------------------------~~~~~~~~~l~~~i~ 59 (179)
T d1ispa_ 4 PVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKT------------------------GTNYNNGPVLSRFVQ 59 (179)
T ss_dssp CEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTT------------------------CCHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCccccc------------------------cccchhhhhHHHHHH
Confidence 36789999999999999999999999999999887543310 111122222333333
Q ss_pred HHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 121 AMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 121 ~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
++++ +. +.+++.|+||||||.++..++.++ |++++++|.+++.........-.........|++.++|+.|.+
T Consensus 60 ~~~~---~~--~~~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~~~l~~~~~~~~~~~~~i~~~~D~~ 134 (179)
T d1ispa_ 60 KVLD---ET--GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPGTDPNQKILYTSIYSSADMI 134 (179)
T ss_dssp HHHH---HH--CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBCCCCSCTTCCCEEEEEEETTCSS
T ss_pred HHHH---hc--CCceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchhhhcCCcccccCceEEEEEecCCcc
Confidence 3333 33 456899999999999999988776 5679999999874322111101111234678999999999999
Q ss_pred ccchhcccchHHHHhcCCeeEEEEeCCCCCCCC---HHHHHHHHHHHHH
Q 025550 199 VLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS---NEELRNLESWIKT 244 (251)
Q Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~ 244 (251)
+++..++ +. ..+.+.+++.+|... .+..+.+.+||+.
T Consensus 135 v~~~~~~-----l~----~~~~~~~~~~~H~~l~~~~~v~~~i~~~L~~ 174 (179)
T d1ispa_ 135 VMNYLSR-----LD----GARNVQIHGVGHIGLLYSSQVNSLIKEGLNG 174 (179)
T ss_dssp SCHHHHC-----CB----TSEEEEESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred cCchhhc-----CC----CceEEEECCCCchhhccCHHHHHHHHHHHhc
Confidence 9976532 11 235567889999643 3345555555543
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.78 E-value=1.4e-18 Score=127.86 Aligned_cols=168 Identities=13% Similarity=0.076 Sum_probs=113.0
Q ss_pred CCCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 36 PMARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
..+.++||++||.+++...|..+++.|. +|.++.+++++.+. .
T Consensus 14 ~~~~~~l~~lhg~~g~~~~~~~la~~L~--~~~v~~~~~~g~~~-------------------------------~---- 56 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEEED-------------------------------R---- 56 (230)
T ss_dssp TTCSEEEEEECCTTCCGGGGHHHHHHCT--TEEEEEECCCCSTT-------------------------------H----
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHCC--CCEEeccCcCCHHH-------------------------------H----
Confidence 4556899999999999999999999994 68888888874311 1
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcc---eEEEeccCCCCcchhh----------------
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLG---GGAIFSGWVPFNASLI---------------- 176 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~---~~i~~~~~~~~~~~~~---------------- 176 (251)
++.+.+.+.+ . .+.+++.|+||||||.+++.+|.+.|+... .++.+.+..+......
T Consensus 57 a~~~~~~i~~---~-~~~~~~~lvGhS~GG~vA~~~A~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (230)
T d1jmkc_ 57 LDRYADLIQK---L-QPEGPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVN 132 (230)
T ss_dssp HHHHHHHHHH---H-CCSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHT
T ss_pred HHHHHHHHHH---h-CCCCcEEEEeeccChHHHHHHHHhhhhhCccceeeecccccCccchhhhhhhhhhhhhhhhhhcc
Confidence 2223333332 1 235689999999999999999998776544 4444443222111000
Q ss_pred ---------------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC
Q 025550 177 ---------------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS 229 (251)
Q Consensus 177 ---------------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~ 229 (251)
........++|+++++|++|..++.. ...+.+.. ..++++++++| +|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~-~~~w~~~~---~~~~~~~~i~g-~H~ 207 (230)
T d1jmkc_ 133 RDNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEW-LASWEEAT---TGAYRMKRGFG-THA 207 (230)
T ss_dssp TTCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTT-EECSGGGB---SSCEEEEECSS-CGG
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhhcccccccccCcceeeeecCCcccchh-HHHHHHhc---cCCcEEEEEcC-CCh
Confidence 00012358899999999999988754 33333322 23678899996 997
Q ss_pred C--CHHHHHHHHHHHHHhhcCC
Q 025550 230 I--SNEELRNLESWIKTRMSCS 249 (251)
Q Consensus 230 ~--~~~~~~~~~~~l~~~l~~~ 249 (251)
. ..+..+++.++|.++|.++
T Consensus 208 ~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 208 EMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp GTTSHHHHHHHHHHHHHHHTCB
T ss_pred hhcCCccHHHHHHHHHHHHhhc
Confidence 4 4556788999999998754
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.75 E-value=1.3e-17 Score=132.54 Aligned_cols=122 Identities=14% Similarity=-0.007 Sum_probs=89.9
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhhhhhhcCCC------cceEEEEccCCCCCCcccCCC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPIKTLFTSPE------FKLTKWSFPSAPNNPVTCNYG 87 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~g 87 (251)
.-++..++..... ...+..+.|||+||+.++...|+.++..|++.| |.++++|+||.+.+..+.
T Consensus 88 ~i~G~~iHf~h~~-------~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~--- 157 (394)
T d1qo7a_ 88 EIEGLTIHFAALF-------SEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP--- 157 (394)
T ss_dssp EETTEEEEEEEEC-------CSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCC---
T ss_pred EECCEEEEEEEEe-------ccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCC---
Confidence 3467777654443 244566889999999999999999999998877 999999999876542111
Q ss_pred CcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 88 AVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 88 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
.............+..+++ .. ..++.+++|||+||.++..++..+|+.+.+++++..
T Consensus 158 ------------------~~~~y~~~~~a~~~~~l~~---~l--g~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~~ 214 (394)
T d1qo7a_ 158 ------------------LDKDFGLMDNARVVDQLMK---DL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNLC 214 (394)
T ss_dssp ------------------SSSCCCHHHHHHHHHHHHH---HT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred ------------------CCCccCHHHHHHHHHHHHh---hc--cCcceEEEEecCchhHHHHHHHHhhccccceeEeee
Confidence 1112334555666666665 33 345789999999999999999999998888887765
Q ss_pred C
Q 025550 168 W 168 (251)
Q Consensus 168 ~ 168 (251)
.
T Consensus 215 ~ 215 (394)
T d1qo7a_ 215 A 215 (394)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.75 E-value=4.8e-17 Score=123.62 Aligned_cols=224 Identities=12% Similarity=0.035 Sum_probs=130.6
Q ss_pred EEEecCCCCCCC--CCCCCCccEEEEEecCCCCCCCchhh---hhhhcCCCcceEEEEccCC----CCCCcccCCCCcCC
Q 025550 21 ILFFWPSSSYSH--EQNPMARNFILWLHGLGDSGPANEPI---KTLFTSPEFKLTKWSFPSA----PNNPVTCNYGAVMP 91 (251)
Q Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~vv~~HG~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~----~~~~~~~~~g~~~~ 91 (251)
..++..|+.+.. .+.+++.|+|+++||.+++...|... .+...+.+..++..+.... +.............
T Consensus 29 ~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~~~~~~~g~~~ 108 (299)
T d1pv1a_ 29 NVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGA 108 (299)
T ss_dssp EEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCTTCCSSSSSSC
T ss_pred EEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcccccccccCCC
Confidence 333344445542 23566789999999999887777552 2344445555544332110 00000000000011
Q ss_pred ccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcC-----CCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEE
Q 025550 92 SWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAG-----IDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAI 164 (251)
Q Consensus 92 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~ 164 (251)
.|+..... ...........-.+++|...|++..... .+.++.+|+|+||||..|+.+|++ +|+.+.++++
T Consensus 109 ~~y~d~~~---~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~~~p~~f~~~~s 185 (299)
T d1pv1a_ 109 GFYLNATQ---EPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSA 185 (299)
T ss_dssp CTTCBCCS---HHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHTGGGTCCSEEEE
T ss_pred cccccccc---CCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHhcCCCceEEEee
Confidence 22111100 0000011122334667777777644111 123579999999999999999986 4888999999
Q ss_pred eccCCCCcchhh----------------------hhh--cccCCCCCEEEEccCCCCcccch-hcccchHHHHhcCCe--
Q 025550 165 FSGWVPFNASLI----------------------DQF--TSDAKKTPILWSHGMADRTVLFE-AGQAGPPFLEQAGIS-- 217 (251)
Q Consensus 165 ~~~~~~~~~~~~----------------------~~~--~~~~~~~p~l~~~g~~D~~~~~~-~~~~~~~~l~~~~~~-- 217 (251)
+++......... ... .......++++.+|++|.....+ ..+.+.+.+++.+.+
T Consensus 186 ~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~G~~D~~~~~~~~~~~f~~~~~~~g~~~~ 265 (299)
T d1pv1a_ 186 FAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDY 265 (299)
T ss_dssp ESCCCCSTTSHHHHHHHHHHSCC----CGGGCHHHHGGGSCCCTTCCEEEECCTTCTTTTTTCCTHHHHHHHTTSTTTTS
T ss_pred ccCcCCcccccchhhhhhhhcccchhhhhhcCHHHHHHHhhccCCcceeEecCCCCcchhhhhcHHHHHHHHHhcCCCcc
Confidence 999765332100 000 01124567899999999876654 235677888877765
Q ss_pred eEEEEeCCCCCCC--CHHHHHHHHHHHHHhhc
Q 025550 218 CEFKAYPGLGHSI--SNEELRNLESWIKTRMS 247 (251)
Q Consensus 218 ~~~~~~~g~~H~~--~~~~~~~~~~~l~~~l~ 247 (251)
+++...+|.+|.+ +...+++.++|+.+.|.
T Consensus 266 ~~~~~~~G~~Hsw~yW~~~i~~~l~f~a~~lg 297 (299)
T d1pv1a_ 266 VEIKKVHGFDHSYYFVSTFVPEHAEFHARNLG 297 (299)
T ss_dssp EEEECCTTCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEecCCCCcCHHHHHHHHHHHHHHHHHhcC
Confidence 7888889878984 57778899999999875
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.74 E-value=6.2e-17 Score=122.82 Aligned_cols=182 Identities=13% Similarity=0.095 Sum_probs=118.6
Q ss_pred CCCCccEEEEEecC--CCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGL--GDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
.....|.+|++||. +++...|..+++.|. .++.++.+++||.+.+.... ......++
T Consensus 56 ~~~~~~~l~c~~~~~~~g~~~~y~~la~~L~-~~~~V~al~~pG~~~~~~~~--------------------~~~~~~s~ 114 (283)
T d2h7xa1 56 RAEGRAVLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTG--------------------TALLPADL 114 (283)
T ss_dssp --CCCCEEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---C--------------------BCCEESSH
T ss_pred CCCCCceEEEeCCCCCCCCHHHHHHHHHhcC-CCceEEEEeCCCCCCCCCCc--------------------cccccCCH
Confidence 34567899999984 467788999999886 57899999999764321000 01112345
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccCCCCcchhhh-----------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGWVPFNASLID----------- 177 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~~~~~~~~~~----------- 177 (251)
.+.++.+.+.+.... +..+++|+||||||.+++.+|.+. ++.+.+++++.+..+.......
T Consensus 115 ~~~a~~~~~~i~~~~----~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T d2h7xa1 115 DTALDAQARAILRAA----GDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLF 190 (283)
T ss_dssp HHHHHHHHHHHHHHH----TTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----CCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhh
Confidence 555555444333221 456899999999999999999864 4568999998876553322111
Q ss_pred -----------------------hhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-HH
Q 025550 178 -----------------------QFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS-NE 233 (251)
Q Consensus 178 -----------------------~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~-~~ 233 (251)
.+.....++|+++++|++|..++.+....+.+.+. ..++++.++| +|... .+
T Consensus 191 ~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~---~~~~~~~v~G-~H~~ml~e 266 (283)
T d2h7xa1 191 AGELEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWD---LPHTVADVPG-DHFTMMRD 266 (283)
T ss_dssp HTCSSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCS---SCSEEEEESS-CTTHHHHT
T ss_pred cccccccccHHHHHHHHHHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCC---CCcEEEEEcC-CCcccccC
Confidence 11234588999999999999988877666654432 2468889997 89743 33
Q ss_pred HHHHHHHHHHHh
Q 025550 234 ELRNLESWIKTR 245 (251)
Q Consensus 234 ~~~~~~~~l~~~ 245 (251)
..+.+.+-|.++
T Consensus 267 ~~~~vA~~i~~~ 278 (283)
T d2h7xa1 267 HAPAVAEAVLSW 278 (283)
T ss_dssp THHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 344443333333
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.9e-17 Score=124.67 Aligned_cols=94 Identities=10% Similarity=0.064 Sum_probs=63.5
Q ss_pred CCccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHH
Q 025550 37 MARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAV 116 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 116 (251)
.+.+.|||+||++++...|..+++.| ++.++.+|+|+.+.. ..+.+.+
T Consensus 23 ~~~~Pl~l~Hg~~gs~~~~~~l~~~L---~~~v~~~d~~g~~~~-----------------------------~~~~~~a 70 (286)
T d1xkta_ 23 SSERPLFLVHPIEGSTTVFHSLASRL---SIPTYGLQCTRAAPL-----------------------------DSIHSLA 70 (286)
T ss_dssp CCSCCEEEECCTTCCCGGGHHHHHTC---SSCEEEECCCTTSCC-----------------------------SCHHHHH
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHc---CCeEEEEeCCCCCCC-----------------------------CCHHHHH
Confidence 33344889999999999999999877 578999999965331 1122233
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEec
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFS 166 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~ 166 (251)
+.+...+.. ..+.+++.|+|||+||.+++.+|.++|+++.+++.+.
T Consensus 71 ~~~~~~~~~----~~~~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l~ 116 (286)
T d1xkta_ 71 AYYIDCIRQ----VQPEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHN 116 (286)
T ss_dssp HHHHHHHHH----HCCSSCCEEEEETHHHHHHHHHHHHHHHC------CC
T ss_pred HHHHHHHHH----hcCCCceEEeecCCccHHHHHHHHHHHHcCCCceeEE
Confidence 333333332 1245789999999999999999999998877665443
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.70 E-value=3e-15 Score=112.47 Aligned_cols=185 Identities=10% Similarity=0.041 Sum_probs=116.6
Q ss_pred cEEEEEecCCC--CCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHH
Q 025550 40 NFILWLHGLGD--SGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLK 114 (251)
Q Consensus 40 ~~vv~~HG~~~--~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 114 (251)
|+|+++||.++ +...|.. +.+.....++.++.+| .+. ..|+..... .....-...
T Consensus 28 pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~---g~~-----------~~~y~~~~~------~~~~~~~tf 87 (267)
T d1r88a_ 28 HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPA---GGA-----------YSMYTNWEQ------DGSKQWDTF 87 (267)
T ss_dssp SEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEEC---CCT-----------TSTTSBCSS------CTTCBHHHH
T ss_pred CEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEEC---CCC-----------CcCCccccc------cccccHHHH
Confidence 89999999754 3345655 3446666777555443 211 111111110 111112223
Q ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh-----------------
Q 025550 115 AVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID----------------- 177 (251)
Q Consensus 115 ~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~----------------- 177 (251)
..++|...|++ +..+++++++|+|+||||..|+.+++++|+.+++++++||.+........
T Consensus 88 l~~eL~~~i~~--~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (267)
T d1r88a_ 88 LSAELPDWLAA--NRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNG 165 (267)
T ss_dssp HHTHHHHHHHH--HSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHCCCTHH
T ss_pred HHHHHHHHHHH--hcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCCccchhhhhhHHhhhcCCcHhh
Confidence 45566666654 66788999999999999999999999999999999999997754321100
Q ss_pred --------hhc----------ccCCCCCEEEEccCCCCcccch-----------hcccchHHHHhc-CCeeEEEEeCCCC
Q 025550 178 --------QFT----------SDAKKTPILWSHGMADRTVLFE-----------AGQAGPPFLEQA-GISCEFKAYPGLG 227 (251)
Q Consensus 178 --------~~~----------~~~~~~p~l~~~g~~D~~~~~~-----------~~~~~~~~l~~~-~~~~~~~~~~g~~ 227 (251)
... ......++++.+|++|..+... ..+.+.+.+++. +.++++...++++
T Consensus 166 ~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~G~ 245 (267)
T d1r88a_ 166 MWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDFPASGD 245 (267)
T ss_dssp HHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCSEEEECCSSCC
T ss_pred ccCCcchHhHHhcCHHHHHHhccccCceEEEEecCCCcccccchhhhhHHHhhhhHHHHHHHHHHcCCCcEEEEEcCCCe
Confidence 000 0114567899999999765532 233566677765 4568888888889
Q ss_pred CCC--CHHHHHHHHHHHHHhh
Q 025550 228 HSI--SNEELRNLESWIKTRM 246 (251)
Q Consensus 228 H~~--~~~~~~~~~~~l~~~l 246 (251)
|.+ +.+.+..+...|...|
T Consensus 246 H~W~~W~~~L~~~~p~~~~~~ 266 (267)
T d1r88a_ 246 NGWGSWAPQLGAMSGDIVGAI 266 (267)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH
T ss_pred EChHHHHHHHHHHHHHHHHhh
Confidence 975 4556666666555544
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=5.1e-17 Score=122.17 Aligned_cols=206 Identities=11% Similarity=0.082 Sum_probs=117.3
Q ss_pred eEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCCCchhh-hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccc
Q 025550 18 IIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGPANEPI-KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDI 96 (251)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~ 96 (251)
..+..|+..|+.+. ++++.|+|+++||.+........+ .......++.++.+.+++......... +.....|...
T Consensus 25 ~~~~~~v~~P~~~~---~~~~yPvi~~lhG~~~~~~~~~~~~~~~~~~~~~~vV~v~~~~~~~~~~~~r-~~d~~~~~~~ 100 (265)
T d2gzsa1 25 RHYRVWTAVPNTTA---PASGYPILYMLDGNAVMDRLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSR-AYDYTPAAES 100 (265)
T ss_dssp CEEEEEEEEESSCC---CTTCEEEEEESSHHHHHHHCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHH-HHHTCCGGGG
T ss_pred EEEEEEEEcCCCCC---CCCCceEEEEecCcchhhhHHHHHHHHHHhcCCCeEEEecCCCCCcCccccc-ccccccccCc
Confidence 45666665554443 557889999999954222111122 234556788888888875533211100 0000001000
Q ss_pred cCCCCCCC-CCC---Ch-hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCC
Q 025550 97 HEIPVTAS-SPK---DE-SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPF 171 (251)
Q Consensus 97 ~~~~~~~~-~~~---~~-~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~ 171 (251)
...+.... ... .. .-.......+...++. +..+++++++|+|+|+||.+++.++.+ ++.+.++++++|....
T Consensus 101 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~--~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~~~a~s~~~~~ 177 (265)
T d2gzsa1 101 RKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQ--GLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGR 177 (265)
T ss_dssp TTCSCC-----CCCCCHHHHHHHHHHTHHHHHTT--TSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGST
T ss_pred ccccccccchhccccchHHHHHHHHHHHHHHHHH--hcCCCcCceEEEeccHHHHHHHHHHHc-CcccCEEEEECCcccc
Confidence 00000000 000 11 1111122223333321 455677889999999999999987665 4568888888886644
Q ss_pred cchh-hhh----hcccCCCCCEEEEccCC--------CCcccchhcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 172 NASL-IDQ----FTSDAKKTPILWSHGMA--------DRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 172 ~~~~-~~~----~~~~~~~~p~l~~~g~~--------D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.... ... ......+.|+++.+|+. |..++.+.++.+.+.|++.|.++++.+|||.+|..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 178 GYDALLSRVTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGVNAVFWDFPNLGHGP 249 (265)
T ss_dssp THHHHHHHHHTSCTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTCCEEEEECTTCCHHH
T ss_pred cchhhhhccccccccccCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCCCEEEEEcCCCCcch
Confidence 3221 111 11233567899999977 55567778889999999999999999999999964
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.69 E-value=2.5e-15 Score=113.67 Aligned_cols=195 Identities=16% Similarity=0.172 Sum_probs=116.7
Q ss_pred CCccEEEEEecCCC--CCCCchh---hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGD--SGPANEP---IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~--~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.+.|+|+++||.++ +...|.. +.+.+.+.++.++.++ .+.. + -...|...... .........
T Consensus 27 ~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~---~~~~------~-~~~~~~~~~~~---~~~~~~~~~ 93 (280)
T d1dqza_ 27 GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPV---GGQS------S-FYTDWYQPSQS---NGQNYTYKW 93 (280)
T ss_dssp CSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEEC---CCTT------C-TTSBCSSSCTT---TTCCSCCBH
T ss_pred CCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEEC---CCCC------C-cCccccCCccc---ccCCcchhH
Confidence 35699999999764 4455654 4456777787655443 2211 0 00112111110 011112223
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhh-------------
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQ------------- 178 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~------------- 178 (251)
..-.+++|...|++ +..+++++++++|+||||..|+.+|+++|+.+++++++||...........
T Consensus 94 ~~~~~~el~~~i~~--~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~~~~~~~~~~~~~~~~~~~~ 171 (280)
T d1dqza_ 94 ETFLTREMPAWLQA--NKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYN 171 (280)
T ss_dssp HHHHHTHHHHHHHH--HHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHH--hcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcccCcchhhhhhhHhhccCCC
Confidence 33446667776665 566788999999999999999999999999999999999976532211000
Q ss_pred ----h--------c---c-------cCCCCCEEEEccCCCCccc--------------chhcccchHHHHhcCCeeEEEE
Q 025550 179 ----F--------T---S-------DAKKTPILWSHGMADRTVL--------------FEAGQAGPPFLEQAGISCEFKA 222 (251)
Q Consensus 179 ----~--------~---~-------~~~~~p~l~~~g~~D~~~~--------------~~~~~~~~~~l~~~~~~~~~~~ 222 (251)
+ . + .....++++.+|+.|.... ....+.+.+.+++.+.......
T Consensus 172 ~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~g~~~~~~~ 251 (280)
T d1dqza_ 172 ANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFN 251 (280)
T ss_dssp HHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HhhccCCcchhhhhhcCHHHHHHHhhhcCCeEEEEeCCCCCccccccccccchhhHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 0 0 0 0134678999998876433 2334567788888876644444
Q ss_pred e-CCCCCCCC--HHHHHHHHHHHHHhh
Q 025550 223 Y-PGLGHSIS--NEELRNLESWIKTRM 246 (251)
Q Consensus 223 ~-~g~~H~~~--~~~~~~~~~~l~~~l 246 (251)
+ ++++|.+. .+.+....-.+.++|
T Consensus 252 ~~~~GgH~W~~W~~~L~~~~p~~~~~l 278 (280)
T d1dqza_ 252 FPPNGTHSWPYWNEQLVAMKADIQHVL 278 (280)
T ss_dssp CCSCCCSSHHHHHHHHHHTHHHHHHHH
T ss_pred EcCCCccCchHHHHHHHHHhHHHHHHh
Confidence 4 45689753 455544444444433
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.67 E-value=3.7e-18 Score=131.36 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=66.1
Q ss_pred EEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccc-----hhcccchHHH
Q 025550 137 FVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLF-----EAGQAGPPFL 211 (251)
Q Consensus 137 ~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~-----~~~~~~~~~l 211 (251)
....++.+....+..+...++.+++++.+.+....... ......++|+++++|++|..+|. ..++.+.+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~~l 272 (318)
T d1qlwa_ 197 VLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPE----DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDAL 272 (318)
T ss_dssp EEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGG----GCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHH
T ss_pred cchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchh----hhhhhccCCEEEEecCcCcccChhhhHHHHHHHHHHHH
Confidence 34445555555555555555555555544433221111 11234689999999999999985 3455678889
Q ss_pred HhcCCeeEEEEeC-----CCCCCCCHHH-----HHHHHHHHHHh
Q 025550 212 EQAGISCEFKAYP-----GLGHSISNEE-----LRNLESWIKTR 245 (251)
Q Consensus 212 ~~~~~~~~~~~~~-----g~~H~~~~~~-----~~~~~~~l~~~ 245 (251)
++.|.++++..+| |++|.+..|. .+.+.+||+++
T Consensus 273 ~~~g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 273 NAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp HHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 9999999999976 5679975432 35556666554
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.64 E-value=2.1e-14 Score=110.93 Aligned_cols=200 Identities=16% Similarity=0.160 Sum_probs=131.6
Q ss_pred CCCCccEEEEEecCCCCCCCc---------hhhh---hhhcCCCcceEEEEccCCCCCCcccCC-CCcCCccccccCCCC
Q 025550 35 NPMARNFILWLHGLGDSGPAN---------EPIK---TLFTSPEFKLTKWSFPSAPNNPVTCNY-GAVMPSWFDIHEIPV 101 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~~---------~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~-g~~~~~w~~~~~~~~ 101 (251)
...+.++||++|++.++...+ ..++ ..+-...|.++++++.+.+....+... ......++...
T Consensus 35 n~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~tg~~~g~~---- 110 (357)
T d2b61a1 35 NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQ---- 110 (357)
T ss_dssp CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGG----
T ss_pred CCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCCCCCCCcc----
Confidence 444568999999999876543 3332 256667899999999876432111000 00000011111
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch------
Q 025550 102 TASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNV-FVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS------ 174 (251)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~------ 174 (251)
-....+.+.++.-..+++ ..++ +++ .++|.||||+.|+.+|.++|+.+..+|.+++.......
T Consensus 111 -----FP~iti~D~v~aq~~Ll~---~LGI--~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~~a~~s~~~~~~~~ 180 (357)
T d2b61a1 111 -----FPNIVVQDIVKVQKALLE---HLGI--SHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAIGFNH 180 (357)
T ss_dssp -----CCCCCHHHHHHHHHHHHH---HTTC--CCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHHHHHH
T ss_pred -----cccchhHHHHHHHHHHHH---HhCc--ceEEEEecccHHHHHHHHHHHhhhHHHhhhcccccccccchhHHHHHH
Confidence 112334444554455555 4454 466 78899999999999999999999999999873221000
Q ss_pred --------------------------h-----------------hhhh--------------------------------
Q 025550 175 --------------------------L-----------------IDQF-------------------------------- 179 (251)
Q Consensus 175 --------------------------~-----------------~~~~-------------------------------- 179 (251)
+ .+.+
T Consensus 181 ~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~rf 260 (357)
T d2b61a1 181 VMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERF 260 (357)
T ss_dssp HHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhhC
Confidence 0 0000
Q ss_pred c--------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCC-CCCCCH
Q 025550 180 T--------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGL-GHSISN 232 (251)
Q Consensus 180 ~--------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~-~H~~~~ 232 (251)
. ..++++|++++..+.|.++|++..+..++.+.+.+.++++++++.. ||.-+.
T Consensus 261 Dan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~~v~~~~I~S~~GHdafL 340 (357)
T d2b61a1 261 DANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGHDAFL 340 (357)
T ss_dssp CHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGGGHHH
T ss_pred CHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCCCeEEEEECCCCCccccC
Confidence 0 0258899999999999999999999999999999999999999975 887555
Q ss_pred HHHHHHHHHHHHhhcC
Q 025550 233 EELRNLESWIKTRMSC 248 (251)
Q Consensus 233 ~~~~~~~~~l~~~l~~ 248 (251)
.+.+.+.+-|+++|.+
T Consensus 341 ~e~~~~~~~I~~fL~~ 356 (357)
T d2b61a1 341 VDYDQFEKRIRDGLAG 356 (357)
T ss_dssp HCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcc
Confidence 5556666666666653
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.64 E-value=3.8e-15 Score=117.47 Aligned_cols=215 Identities=11% Similarity=0.030 Sum_probs=130.5
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCC------CC-----chhhhhhhcCCCcceEEEEccCCCCCCc
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSG------PA-----NEPIKTLFTSPEFKLTKWSFPSAPNNPV 82 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~------~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 82 (251)
..++..+...+..| ...++.|+||+.|+++... .. +....+.|+++||.++.+|.++.+.+..
T Consensus 31 ~rDG~~L~~~v~~P------~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~G 104 (381)
T d1mpxa2 31 MRDGVKLHTVIVLP------KGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 104 (381)
T ss_dssp CTTSCEEEEEEEEE------TTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred CCCCCEEEEEEEEe------CCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCCC
Confidence 34566666555442 2346789999999886311 11 1225567899999999999998765422
Q ss_pred ccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceE
Q 025550 83 TCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGG 162 (251)
Q Consensus 83 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~ 162 (251)
... ++.............+..|..++++++.+ +..++.+||+++|+|+||.+++.+|...|+.++++
T Consensus 105 ~~~-------~~~~~~~~~~~~~~~~~~D~~~~i~w~~~------~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~ 171 (381)
T d1mpxa2 105 DYV-------MTRPLRGPLNPSEVDHATDAWDTIDWLVK------NVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVA 171 (381)
T ss_dssp CCC-------TTCCCSBTTBCSSCCHHHHHHHHHHHHHH------HCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEE
T ss_pred cee-------ccchhhhhcccchhHHHHHHHHHHHHHhh------cCCcCccceeeecccHHHHHHHHHHhcccccccee
Confidence 110 00000000000011122333333333322 44567789999999999999999999999899999
Q ss_pred EEeccCCCCcch--h-----------------------------------------------h-----------------
Q 025550 163 AIFSGWVPFNAS--L-----------------------------------------------I----------------- 176 (251)
Q Consensus 163 i~~~~~~~~~~~--~-----------------------------------------------~----------------- 176 (251)
|..++..+.... . .
T Consensus 172 v~~~~~~d~~~~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (381)
T d1mpxa2 172 VPESPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEH 251 (381)
T ss_dssp EEESCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHT
T ss_pred eeeccccccccccccccCchhhhccHHHHHhhhhhccccchhhhhhhhhHHHHHhcccccccchhhccccchHHHHHhhC
Confidence 998875542110 0 0
Q ss_pred -------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHH---hcCCeeEEEEeCCCCCCCC---------
Q 025550 177 -------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLE---QAGISCEFKAYPGLGHSIS--------- 231 (251)
Q Consensus 177 -------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~---~~~~~~~~~~~~g~~H~~~--------- 231 (251)
......++++|+|++.|..|..+..... ..++.++ ..+.+.++++-|. +|...
T Consensus 252 ~~~d~~w~~~s~~~~~~~~~i~vP~l~i~G~~d~~~~~~~~-~~~~~~~~~~~~~~~~~LviGPw-~H~~~~~~~~~~~~ 329 (381)
T d1mpxa2 252 AAYDAFWQEQALDKVMARTPLKVPTMWLQGLWDQEDMWGAI-HSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGA 329 (381)
T ss_dssp CSSCHHHHTTCHHHHHHTSCCCSCEEEEEETTCSSCSSHHH-HHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETT
T ss_pred CCccchhhhcCchhhhhhccccCceEEEeccccCCccccHH-HHHHHHHHhccccCCceEEEecC-cCCCCccCCCcCCc
Confidence 0001124789999999999987665432 2334443 3356789999996 78421
Q ss_pred ----HH-----HHHHHHHHHHHhhcCC
Q 025550 232 ----NE-----ELRNLESWIKTRMSCS 249 (251)
Q Consensus 232 ----~~-----~~~~~~~~l~~~l~~~ 249 (251)
.+ ..+.+.+||..+|+..
T Consensus 330 ~~~~~~~~~~~~~~~~l~wFD~~LKg~ 356 (381)
T d1mpxa2 330 LNFEGDTARQFRHDVLRPFFDQYLVDG 356 (381)
T ss_dssp EECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred cccccchhhhhHHHHHHHHHHHHhCCC
Confidence 11 1344789999999853
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.61 E-value=5.1e-15 Score=115.41 Aligned_cols=200 Identities=12% Similarity=-0.010 Sum_probs=129.1
Q ss_pred ecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCCCC----CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcC
Q 025550 15 SGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDSGP----ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVM 90 (251)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~ 90 (251)
.++..+...+..| ...++.|+||+.||++.... .+...++.|+++||.++.+|.|+.+.+..
T Consensus 13 rDGv~L~~~vy~P------~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S~G-------- 78 (347)
T d1ju3a2 13 RDGVRLAVDLYRP------DADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEG-------- 78 (347)
T ss_dssp TTSCEEEEEEEEE------CCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTCCS--------
T ss_pred CCCCEEEEEEEEc------CCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCccccCC--------
Confidence 4666666655442 23467899999999875332 22335567889999999999998765421
Q ss_pred CccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCC
Q 025550 91 PSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVP 170 (251)
Q Consensus 91 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~ 170 (251)
.+.. ......+..+.+++ +. +......||+++|+|+||.+++.+|...|..+++++...+..+
T Consensus 79 -~~~~---------~~~~~~d~~d~i~w----~~---~q~~~~grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d 141 (347)
T d1ju3a2 79 -EFVP---------HVDDEADAEDTLSW----IL---EQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASAD 141 (347)
T ss_dssp -CCCT---------TTTHHHHHHHHHHH----HH---HSTTEEEEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSC
T ss_pred -cccc---------ccchhhhHHHHHHH----HH---hhccCCcceEeeeccccccchhhhhhcccccceeeeeccccch
Confidence 1100 01122233333332 22 3333347999999999999999999999988999998887654
Q ss_pred Ccchhh-----------------------------------------------------------------------hh-
Q 025550 171 FNASLI-----------------------------------------------------------------------DQ- 178 (251)
Q Consensus 171 ~~~~~~-----------------------------------------------------------------------~~- 178 (251)
...... ..
T Consensus 142 ~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
T d1ju3a2 142 LYRAPWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQV 221 (347)
T ss_dssp TCCCCCSCTTCCCCHHHHHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTT
T ss_pred hhhhhhhhcCCccchhhHHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHh
Confidence 321000 00
Q ss_pred ----------------hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCCCC-----------
Q 025550 179 ----------------FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHSIS----------- 231 (251)
Q Consensus 179 ----------------~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~----------- 231 (251)
-...++++|+|+++|..|..++. +...++.++. +.+.++++.|+ +|...
T Consensus 222 ~~~~~~~~~w~~~~~~~~~~~i~vP~L~i~G~~D~~~~~--~~~~~~~~~~-~~~~~liigpw-~H~~~~~~~~~~~~g~ 297 (347)
T d1ju3a2 222 VDHPDNDESWQSISLFERLGGLATPALITAGWYDGFVGE--SLRTFVAVKD-NADARLVVGPW-SHSNLTGRNADRKFGI 297 (347)
T ss_dssp TTCCSCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTHHH--HHHHHHHHTT-TSCEEEEEEEE-ESSCCSSEETTEECCG
T ss_pred hhcccchhhhhcCCHHHHhhcCCCCEEEeccccCCCcch--hHHHHHHhhc-cCCceEEEcCc-cccCcccccCCCCCCc
Confidence 00125889999999999987553 3456666654 45678888775 66421
Q ss_pred ------HHHHHHHHHHHHHhhcCC
Q 025550 232 ------NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 232 ------~~~~~~~~~~l~~~l~~~ 249 (251)
.+..+...+|+..+|+..
T Consensus 298 ~~~~~~~~~~~~~l~wfD~~LKg~ 321 (347)
T d1ju3a2 298 AATYPIQEATTMHKAFFDRHLRGE 321 (347)
T ss_dssp GGSCCHHHHHHHHHHHHHHHTSCC
T ss_pred cccccHHHHHHHHHHHHHHHhCCC
Confidence 233567899999999854
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.59 E-value=3.2e-14 Score=106.99 Aligned_cols=100 Identities=16% Similarity=-0.020 Sum_probs=68.0
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhh----------hhcccCCCCCEEEEccCCCCccc
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLID----------QFTSDAKKTPILWSHGMADRTVL 200 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~----------~~~~~~~~~p~l~~~g~~D~~~~ 200 (251)
+|.++++++|+|+||.+++.+|+++|+.++++++++|.......... .........++++..|+.|..+.
T Consensus 141 ~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 220 (273)
T d1wb4a1 141 ASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAYA 220 (273)
T ss_dssp TTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEETTCTTHH
T ss_pred CCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccccCCCcccccccchhhhhhhhhcccceEEEEecCCCCcccc
Confidence 57889999999999999999999999999999999997654332111 01122344566777777775433
Q ss_pred ch--------hcccchHHHHhcCCeeEEEEeCCCCCCC
Q 025550 201 FE--------AGQAGPPFLEQAGISCEFKAYPGLGHSI 230 (251)
Q Consensus 201 ~~--------~~~~~~~~l~~~~~~~~~~~~~g~~H~~ 230 (251)
.. ........+...+..+.+..+++++|.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ggH~w 258 (273)
T d1wb4a1 221 NMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGATHWW 258 (273)
T ss_dssp HHHHHHHHHHTSTTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCEEEEEECCCccCH
Confidence 21 1112222233445678888999999964
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.57 E-value=1.7e-14 Score=107.44 Aligned_cols=176 Identities=12% Similarity=0.075 Sum_probs=116.0
Q ss_pred CCCccEEEEEec--CCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHH
Q 025550 36 PMARNFILWLHG--LGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLL 113 (251)
Q Consensus 36 ~~~~~~vv~~HG--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 113 (251)
....|.+|++|| .+++...|..+++.|.. .+.++.++.|+.... .....++.
T Consensus 39 g~~~~~l~c~~~~~~gg~~~~y~~La~~L~~-~~~V~al~~pG~~~~-------------------------e~~~~s~~ 92 (255)
T d1mo2a_ 39 GPGEVTVICCAGTAAISGPHEFTRLAGALRG-IAPVRAVPQPGYEEG-------------------------EPLPSSMA 92 (255)
T ss_dssp CSCSSEEEEECCCSSSCSGGGGHHHHHHHTT-TCCEEEECCTTSSTT-------------------------CCEESSHH
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhcCC-CceEEEEeCCCcCCC-------------------------CCCCCCHH
Confidence 346789999998 45677889999998874 589999999965321 11123455
Q ss_pred HHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc---CCCcceEEEeccCCCCcchhh--------------
Q 025550 114 KAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY---PRKLGGGAIFSGWVPFNASLI-------------- 176 (251)
Q Consensus 114 ~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p~~~~~~i~~~~~~~~~~~~~-------------- 176 (251)
+.++.+.+.|.. ..+..++.|+|||+||.+++.+|.+. .+.+.+++++.++.+......
T Consensus 93 ~~a~~~~~~i~~----~~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~ 168 (255)
T d1mo2a_ 93 AVAAVQADAVIR----TQGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDR 168 (255)
T ss_dssp HHHHHHHHHHHH----TTSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHH----hCCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEECCCCCCCccchhhHHHHHHHHhhcc
Confidence 555555544432 22456899999999999999999764 456889999988665332211
Q ss_pred --------------------hhhcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCCCCCC-CCHHHH
Q 025550 177 --------------------DQFTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPGLGHS-ISNEEL 235 (251)
Q Consensus 177 --------------------~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~-~~~~~~ 235 (251)
..+......+|++++.+++|...... ..+.+. ....++.+.++| +|+ +..+..
T Consensus 169 ~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~p~l~v~a~~~~~~~~~--~~w~~~---~~~~~~~~~v~G-~H~~ml~~~~ 242 (255)
T d1mo2a_ 169 ETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAGEPMGPWPD--DSWKPT---WPFEHDTVAVPG-DHFTMVQEHA 242 (255)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCSSSSCCTT--CCCCCC---CCSSCEEEECCS-CCSSCSSCCH
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCccccceEEEeecCCCCCcchh--hHHHHh---CCCCcEEEEECC-CCcccccccH
Confidence 11223458899999999887543322 222222 233578899997 897 444455
Q ss_pred HHHHHHHHHhhc
Q 025550 236 RNLESWIKTRMS 247 (251)
Q Consensus 236 ~~~~~~l~~~l~ 247 (251)
+.+.+-|.++|.
T Consensus 243 ~~~A~~i~~~L~ 254 (255)
T d1mo2a_ 243 DAIARHIDAWLG 254 (255)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 666666666553
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.57 E-value=2.3e-13 Score=105.26 Aligned_cols=198 Identities=15% Similarity=0.095 Sum_probs=127.2
Q ss_pred CCCCccEEEEEecCCCCCC-------------Cchhhhh---hhcCCCcceEEEEccCCCCCCcccCC--CCcCCccccc
Q 025550 35 NPMARNFILWLHGLGDSGP-------------ANEPIKT---LFTSPEFKLTKWSFPSAPNNPVTCNY--GAVMPSWFDI 96 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~-------------~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~--g~~~~~w~~~ 96 (251)
...+.++||++|+++++.. .|..++- .+-...|.+++++..+.+....+... -.....|..
T Consensus 38 n~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~~p~~~~~yg~- 116 (362)
T d2pl5a1 38 SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGS- 116 (362)
T ss_dssp CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGG-
T ss_pred CCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCccccccccccccCc-
Confidence 4455699999999987642 1333222 56677899999999976543111100 000011100
Q ss_pred cCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcch-
Q 025550 97 HEIPVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNV-FVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNAS- 174 (251)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~- 174 (251)
......+.+.+..-+.+++ ..+++ ++ .++|.||||+.|+.+|.++|+.++.+|.+++.......
T Consensus 117 ---------~fP~~t~~D~v~~~~~ll~---~LGI~--~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia~sa~~s~~~ 182 (362)
T d2pl5a1 117 ---------RFPFVSIQDMVKAQKLLVE---SLGIE--KLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQ 182 (362)
T ss_dssp ---------GSCCCCHHHHHHHHHHHHH---HTTCS--SEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHH
T ss_pred ---------CCccchhHHHHHHHHHHHH---HhCcC--eeEEEeehhHHHHHHHHHHHhCchHhhhhcccccccccCHHH
Confidence 1112334444444444555 45553 54 58899999999999999999999999999873321000
Q ss_pred ------------------------------h-----------------hhhhc---------------------------
Q 025550 175 ------------------------------L-----------------IDQFT--------------------------- 180 (251)
Q Consensus 175 ------------------------------~-----------------~~~~~--------------------------- 180 (251)
+ ...+.
T Consensus 183 ~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~ 262 (362)
T d2pl5a1 183 IAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFV 262 (362)
T ss_dssp HHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSS
T ss_pred HHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHH
Confidence 0 00000
Q ss_pred -----------------------------ccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeCC-CCCCC
Q 025550 181 -----------------------------SDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYPG-LGHSI 230 (251)
Q Consensus 181 -----------------------------~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~g-~~H~~ 230 (251)
..+++.|++++..+.|.++|++..+..++.+...+.++++++++. .||.-
T Consensus 263 ~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~~v~~~eI~S~~GHda 342 (362)
T d2pl5a1 263 DRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEGHDS 342 (362)
T ss_dssp SCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBSSGG
T ss_pred hcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcch
Confidence 025889999999999999999999999999999999999988875 48865
Q ss_pred CHHHHHHHHHHHHHhhc
Q 025550 231 SNEELRNLESWIKTRMS 247 (251)
Q Consensus 231 ~~~~~~~~~~~l~~~l~ 247 (251)
+..+.+++.+-|+++|.
T Consensus 343 FL~e~~~~~~~I~~FL~ 359 (362)
T d2pl5a1 343 FLLKNPKQIEILKGFLE 359 (362)
T ss_dssp GGSCCHHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHc
Confidence 43344445555555554
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.55 E-value=2.5e-14 Score=108.73 Aligned_cols=143 Identities=18% Similarity=0.160 Sum_probs=95.6
Q ss_pred CCCCccEEEEEecCCCCCCC--chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 35 NPMARNFILWLHGLGDSGPA--NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
...++| |||+||++.+... |..+++.|.+.||.++.+|+|+.+. .+.
T Consensus 28 ~~~~~P-VvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~------------------------------~d~ 76 (317)
T d1tcaa_ 28 SSVSKP-ILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFML------------------------------NDT 76 (317)
T ss_dssp TSCSSE-EEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTC------------------------------SCH
T ss_pred CCCCCc-EEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCC------------------------------Cch
Confidence 333444 7889999877654 5668889999999999999985432 112
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC---CcceEEEeccCCCCcc----------------
Q 025550 113 LKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR---KLGGGAIFSGWVPFNA---------------- 173 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~~~~~~~~---------------- 173 (251)
....+++.+.++.+.+ ....++|.|+||||||.++.+++..+|+ .+..+|.+++...-..
T Consensus 77 ~~sae~la~~i~~v~~-~~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~~~Gt~~a~~~~~~~~~~pa~~ 155 (317)
T d1tcaa_ 77 QVNTEYMVNAITALYA-GSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVW 155 (317)
T ss_dssp HHHHHHHHHHHHHHHH-HTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHH
T ss_pred HhHHHHHHHHHHHHHH-hccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCCCCCcccccchhhhhccCchhh
Confidence 2334444444444431 1235689999999999999999888874 5888898887442111
Q ss_pred ------hhhhhhc---ccCCCCCEEEEccCCCCcccchhcccchH
Q 025550 174 ------SLIDQFT---SDAKKTPILWSHGMADRTVLFEAGQAGPP 209 (251)
Q Consensus 174 ------~~~~~~~---~~~~~~p~l~~~g~~D~~~~~~~~~~~~~ 209 (251)
.+.+.+. .....+|...+++..|.+|.+..+..+.+
T Consensus 156 q~~~~s~fl~~L~~~~~~~~~V~~t~I~s~~D~iV~P~~~~~~~~ 200 (317)
T d1tcaa_ 156 QQTTGSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLD 200 (317)
T ss_dssp HTBTTCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTS
T ss_pred hhcCCcHHHHHHHhCCCCCCCCCEEEEecCCCcccCccccchhcc
Confidence 1111111 12256899999999999998876655444
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.52 E-value=8.9e-14 Score=110.39 Aligned_cols=172 Identities=13% Similarity=0.031 Sum_probs=113.4
Q ss_pred hhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHHHHHHHHHHH--------HHcC
Q 025550 59 KTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVRNVHAMIDKE--------VAAG 130 (251)
Q Consensus 59 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--------~~~~ 130 (251)
.++|.++||.++.+|.||.+.+. ..|. .. .+....+..+.++++....... .+..
T Consensus 129 ~~~~~~~GYavv~~D~RG~g~S~---------G~~~-~~-------~~~e~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~ 191 (405)
T d1lnsa3 129 NDYFLTRGFASIYVAGVGTRSSD---------GFQT-SG-------DYQQIYSMTAVIDWLNGRARAYTSRKKTHEIKAS 191 (405)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSC---------SCCC-TT-------SHHHHHHHHHHHHHHTTSSCEESSTTCCCEECCT
T ss_pred hHHHHhCCCEEEEECCCCCCCCC---------Cccc-cC-------ChhhhhhHHHHHHHHHhccccccccccccccccc
Confidence 34688999999999999875542 1110 00 0111223333333332100000 0011
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhh----------------------------------
Q 025550 131 IDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLI---------------------------------- 176 (251)
Q Consensus 131 ~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~---------------------------------- 176 (251)
....||+++|+|+||...+.+|...|+.+++++..++..+......
T Consensus 192 WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (405)
T d1lnsa3 192 WANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNLDGADFL 271 (405)
T ss_dssp TEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGGSHHHHH
T ss_pred ccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccccccccchhh
Confidence 2235899999999999999999999989999999888654321100
Q ss_pred ----------------------------hh----hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcCCeeEEEEeC
Q 025550 177 ----------------------------DQ----FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAGISCEFKAYP 224 (251)
Q Consensus 177 ----------------------------~~----~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (251)
.. ....++++|+|+++|..|..++..++..+++.+++ +.+.++++.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~-~~~~~Lilgp 350 (405)
T d1lnsa3 272 KGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GHAKHAFLHR 350 (405)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TCCEEEEEES
T ss_pred hchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHh-CCCcEEEEeC
Confidence 00 00135899999999999999988888788888864 5677888888
Q ss_pred CCCCCCC-----HHHHHHHHHHHHHhhcCC
Q 025550 225 GLGHSIS-----NEELRNLESWIKTRMSCS 249 (251)
Q Consensus 225 g~~H~~~-----~~~~~~~~~~l~~~l~~~ 249 (251)
+ +|... .+..+.+.+||..+|+..
T Consensus 351 w-~H~~~~~~~~~d~~~~~~~wFD~~LkG~ 379 (405)
T d1lnsa3 351 G-AHIYMNSWQSIDFSETINAYFVAKLLDR 379 (405)
T ss_dssp C-SSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred C-CCCCCcccccchHHHHHHHHHHHHhCCC
Confidence 6 89653 344678899999999754
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.47 E-value=9.2e-13 Score=103.84 Aligned_cols=136 Identities=10% Similarity=0.003 Sum_probs=84.2
Q ss_pred eecceEEEEEecCCCCCCCCCCCCCccEEEEEecCCCC----C--C------CchhhhhhhcCCCcceEEEEccCCCCCC
Q 025550 14 LSGTIIFILFFWPSSSYSHEQNPMARNFILWLHGLGDS----G--P------ANEPIKTLFTSPEFKLTKWSFPSAPNNP 81 (251)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~----~--~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 81 (251)
..++..+...+..| ...++.|+||+.|+++.. . . ........|+++||.++.+|.|+.+.+.
T Consensus 35 mrDG~~L~~~v~~P------~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~ 108 (385)
T d2b9va2 35 MRDGVKLYTVIVIP------KNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 108 (385)
T ss_dssp CTTSCEEEEEEEEE------TTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred CCCCCEEEEEEEEc------CCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCC
Confidence 34566665544432 235688999999988621 1 1 1122555789999999999999876542
Q ss_pred cccCCCCcCCccccccCC--CCCCCCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCc
Q 025550 82 VTCNYGAVMPSWFDIHEI--PVTASSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKL 159 (251)
Q Consensus 82 ~~~~~g~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~ 159 (251)
. .|...... ........+..|..++++++.+ +..++.+||+++|+|+||.+++.+|...|+.+
T Consensus 109 G---------~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~------q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l 173 (385)
T d2b9va2 109 G---------DYVMTRPPHGPLNPTKTDETTDAWDTVDWLVH------NVPESNGRVGMTGSSYEGFTVVMALLDPHPAL 173 (385)
T ss_dssp S---------CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHH------SCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTE
T ss_pred C---------ceeeccccccccccchhhHHHHHHHHHHHHHh------ccCccccceeeccccHHHHHHHHHHhccCCcc
Confidence 2 12110000 0000011223444444444332 33467789999999999999999999999889
Q ss_pred ceEEEeccCCC
Q 025550 160 GGGAIFSGWVP 170 (251)
Q Consensus 160 ~~~i~~~~~~~ 170 (251)
++++..++..+
T Consensus 174 ~a~~~~~~~~d 184 (385)
T d2b9va2 174 KVAAPESPMVD 184 (385)
T ss_dssp EEEEEEEECCC
T ss_pred eEEEEeccccc
Confidence 99998776543
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.46 E-value=1.2e-13 Score=106.17 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=73.4
Q ss_pred CccEEEEEecCCCCCC------CchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 38 ARNFILWLHGLGDSGP------ANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
+.| |||+||++++.. .|..+.+.|.+.||.++.+++|+.+.+. .....
T Consensus 8 k~P-vvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~-------------------------~~~~~ 61 (319)
T d1cvla_ 8 RYP-VILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDD-------------------------GPNGR 61 (319)
T ss_dssp SSC-EEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTT-------------------------STTSH
T ss_pred CCC-EEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCC-------------------------CCccc
Confidence 345 678999887654 3677888999999999999998654320 01122
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..+..+.+.++++ .. +.+++.++||||||.++..++..+|+.++.++.+++.
T Consensus 62 ~~~l~~~i~~~~~---~~--~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~p 113 (319)
T d1cvla_ 62 GEQLLAYVKQVLA---AT--GATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTP 113 (319)
T ss_dssp HHHHHHHHHHHHH---HH--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHH---Hh--CCCCEEEEeccccHHHHHHHHHHCccccceEEEECCC
Confidence 3333444444444 23 4579999999999999999999999999999999873
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.45 E-value=5.6e-14 Score=106.92 Aligned_cols=119 Identities=19% Similarity=0.272 Sum_probs=88.4
Q ss_pred HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEE-eccCCCCcc---h-hhhh------------------------
Q 025550 128 AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAI-FSGWVPFNA---S-LIDQ------------------------ 178 (251)
Q Consensus 128 ~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~-~~~~~~~~~---~-~~~~------------------------ 178 (251)
++++|+++|+|+|+|+||.+++.++..+|+.+++.+. +++. +... . ....
T Consensus 5 ~y~iDp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~-p~~ca~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 83 (318)
T d2d81a1 5 AFNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGG-PYDCARNQYYTSCMYNGYPSITTPTANMKSWSGNQIA 83 (318)
T ss_dssp CCCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCC-CTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHBTTTBC
T ss_pred hcCCCccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccC-chhhhcccchHHHhhcCCCCCcChhHHHHHHhhcCCc
Confidence 5678999999999999999999999999999975443 4331 1100 0 0000
Q ss_pred hcccCCCCCEEEEccCCCCcccchhcccchHHHHhcC--CeeEEEEeCCCCCCCCH-----------------------H
Q 025550 179 FTSDAKKTPILWSHGMADRTVLFEAGQAGPPFLEQAG--ISCEFKAYPGLGHSISN-----------------------E 233 (251)
Q Consensus 179 ~~~~~~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~~--~~~~~~~~~g~~H~~~~-----------------------~ 233 (251)
........|++++||++|.+|+++.++.+++.+++.+ .+++++..++++|.+.. +
T Consensus 84 ~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~~g~g~~~c~~~~~pyi~~C~~d 163 (318)
T d2d81a1 84 SVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYD 163 (318)
T ss_dssp CGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEEECSSC
T ss_pred chhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCCCCcccccccccCChhhhcCCCc
Confidence 0011256899999999999999999999999998864 46889999999997631 2
Q ss_pred HHHHHHHHHHHhhc
Q 025550 234 ELRNLESWIKTRMS 247 (251)
Q Consensus 234 ~~~~~~~~l~~~l~ 247 (251)
...++++||-.-|+
T Consensus 164 ~a~~iL~~~yg~~~ 177 (318)
T d2d81a1 164 GAGAALKWIYGSLN 177 (318)
T ss_dssp HHHHHHHHHHSSCC
T ss_pred HHHHHHHHHhcccC
Confidence 25788888877765
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.45 E-value=1.2e-11 Score=95.89 Aligned_cols=119 Identities=16% Similarity=0.182 Sum_probs=74.9
Q ss_pred CCCCCccEEEEEecCCCCCCC---chhhh---hhhcCCCcceEEEEccCCCCCCc---ccCC-CCcCCccccccCCCCCC
Q 025550 34 QNPMARNFILWLHGLGDSGPA---NEPIK---TLFTSPEFKLTKWSFPSAPNNPV---TCNY-GAVMPSWFDIHEIPVTA 103 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~~~~~---~~~~~---~~~~~~g~~~~~~~~~~~~~~~~---~~~~-g~~~~~w~~~~~~~~~~ 103 (251)
.+..+.++||++|++.++... |..++ +.+-...|-+++++..+.+.... +... ......|..
T Consensus 39 ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~~p~~~~~~~yg~-------- 110 (376)
T d2vata1 39 MNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGA-------- 110 (376)
T ss_dssp CCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGG--------
T ss_pred cCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCCCcccccCCcccc--------
Confidence 344567999999999877643 33433 25666889999999987643210 0000 000111110
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHcCCCCCcE-EEEEeChhHHHHHHHHHhcCCCcceEEEecc
Q 025550 104 SSPKDESSLLKAVRNVHAMIDKEVAAGIDPNNV-FVCGFSQGGALTLASVLLYPRKLGGGAIFSG 167 (251)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~ 167 (251)
.-...++.+.+..-..+++ ..++ +++ .|+|.||||+.|+.+|..+|+.+..+|.+++
T Consensus 111 --~FP~~ti~D~v~aq~~ll~---~LGI--~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~ 168 (376)
T d2vata1 111 --KFPRTTIRDDVRIHRQVLD---RLGV--RQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIAT 168 (376)
T ss_dssp --GCCCCCHHHHHHHHHHHHH---HHTC--CCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESC
T ss_pred --cCCcchhHHHHHHHHHHHH---HhCc--ceEEEeecccHHHHHHHHHHHhchHHHhhhccccc
Confidence 0112334444444444555 3454 455 7999999999999999999999999999987
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.43 E-value=3.2e-13 Score=101.84 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=71.4
Q ss_pred CCccEEEEEecCCCCCCC-----chhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 37 MARNFILWLHGLGDSGPA-----NEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 37 ~~~~~vv~~HG~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.+.| |||+||++++... |..+.+.|.+.|+.++.+|+|+.+. ....
T Consensus 6 ~~~P-vvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~~----------------------------~~~~ 56 (285)
T d1ex9a_ 6 TKYP-IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDT----------------------------SEVR 56 (285)
T ss_dssp CSSC-EEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSC----------------------------HHHH
T ss_pred CCCC-EEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCCC----------------------------cHHH
Confidence 3456 8999998876433 6778889999999999999884321 1122
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGW 168 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~ 168 (251)
..+..+.+.++++ .. +.+++.++||||||.++..++..+|+++++++.+++.
T Consensus 57 a~~l~~~i~~~~~---~~--g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~tP 108 (285)
T d1ex9a_ 57 GEQLLQQVEEIVA---LS--GQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp HHHHHHHHHHHHH---HH--CCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHH---Hc--CCCeEEEEEECccHHHHHHHHHHCCccceeEEEECCC
Confidence 2223333333333 33 4568999999999999999999999999999998763
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.18 E-value=3.1e-11 Score=78.32 Aligned_cols=83 Identities=11% Similarity=-0.053 Sum_probs=57.7
Q ss_pred CccEEEEEecCCCCCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHHHH
Q 025550 38 ARNFILWLHGLGDSGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKAVR 117 (251)
Q Consensus 38 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 117 (251)
+-|.||++||. +..+.+.+ +.+|.++++|+|+++.+.. ...+..+..+
T Consensus 20 ~G~pvlllHG~------~~~w~~~L-~~~yrvi~~DlpG~G~S~~-------------------------p~~s~~~~a~ 67 (122)
T d2dsta1 20 KGPPVLLVAEE------ASRWPEAL-PEGYAFYLLDLPGYGRTEG-------------------------PRMAPEELAH 67 (122)
T ss_dssp CSSEEEEESSS------GGGCCSCC-CTTSEEEEECCTTSTTCCC-------------------------CCCCHHHHHH
T ss_pred CCCcEEEEecc------cccccccc-cCCeEEEEEeccccCCCCC-------------------------cccccchhHH
Confidence 44779999983 23334445 4799999999998765310 1123445566
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC
Q 025550 118 NVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR 157 (251)
Q Consensus 118 ~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 157 (251)
++.++++ ..+ .++..++|||+||.++..++...+.
T Consensus 68 ~i~~ll~---~L~--i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 68 FVAGFAV---MMN--LGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp HHHHHHH---HTT--CCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred HHHHHHH---HhC--CCCcEEEEeCccHHHHHHHHhhccc
Confidence 6667666 333 4578999999999999999887554
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.10 E-value=5.1e-10 Score=84.83 Aligned_cols=138 Identities=13% Similarity=0.072 Sum_probs=86.2
Q ss_pred CCCccEEEEEecCCCCCCC-chh-hhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPA-NEP-IKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~-~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+..+|++|++||+.++... |.. +.. +|...++.++.+|+..... . +| .......
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~-----------~-~Y-----------~~a~~n~ 123 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQ-----------T-SY-----------TQAANNV 123 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHS-----------S-CH-----------HHHHHHH
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccC-----------c-ch-----------HHHHHHH
Confidence 4578999999999876654 322 443 6777789999999853210 0 11 1112233
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhcccCC-CCCEEE
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSDAK-KTPILW 190 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~p~l~ 190 (251)
....+.+.++|+.+. ..+++.+++.|+|||+||++|..++.+ ...+..++.+.|..+............+. ..=|-+
T Consensus 124 ~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~-~~~l~rItgLDPA~P~F~~~~~~~rLd~~DA~fVdv 202 (337)
T d1rp1a2 124 RVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSR-TPGLGRITGLDPVEASFQGTPEEVRLDPTDADFVDV 202 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHT-STTCCEEEEESCCCTTTTTSCTTTSCCGGGSSEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheEEEeecHHHhhhHHHHHh-hccccceeccCCCccccCCCChhhCcCcccCceEEE
Confidence 334455555555544 568889999999999999999866554 45789999998877765432222111111 223446
Q ss_pred EccCCCC
Q 025550 191 SHGMADR 197 (251)
Q Consensus 191 ~~g~~D~ 197 (251)
||.+.+.
T Consensus 203 IHT~~~~ 209 (337)
T d1rp1a2 203 IHTDAAP 209 (337)
T ss_dssp ECSCCSC
T ss_pred EEecCcc
Confidence 6766554
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.08 E-value=6.8e-10 Score=84.02 Aligned_cols=139 Identities=13% Similarity=0.118 Sum_probs=90.5
Q ss_pred CCCccEEEEEecCCCCCCC-chh-hhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHH
Q 025550 36 PMARNFILWLHGLGDSGPA-NEP-IKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSL 112 (251)
Q Consensus 36 ~~~~~~vv~~HG~~~~~~~-~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 112 (251)
+..+|++|++||+.++... |.. +.+ ++....+.++.+|+..... .. | .......
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~-----------~~-Y-----------~~a~~n~ 123 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSR-----------TE-Y-----------TQASYNT 123 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHS-----------SC-H-----------HHHHHHH
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhcc-----------cc-h-----------HHHHHhH
Confidence 5678999999999876554 222 433 6777889999999853210 00 0 1112333
Q ss_pred HHHHHHHHHHHHHHH-HcCCCCCcEEEEEeChhHHHHHHHHHhcCCCcceEEEeccCCCCcchhhhhhccc-CCCCCEEE
Q 025550 113 LKAVRNVHAMIDKEV-AAGIDPNNVFVCGFSQGGALTLASVLLYPRKLGGGAIFSGWVPFNASLIDQFTSD-AKKTPILW 190 (251)
Q Consensus 113 ~~~~~~l~~~i~~~~-~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~p~l~ 190 (251)
....+.+..+|..+. ..+++.+++.|+|||+||++|-.++.+.+.++..++.+.|..+............ .-..=|-+
T Consensus 124 ~~Vg~~ia~~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~P~F~~~~~~~rLd~~DA~fVdV 203 (338)
T d1bu8a2 124 RVVGAEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCFQGLPEEVRLDPSDAMFVDV 203 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBCTTTTTSCGGGSCCGGGSSSEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhhccccccccccccCcCcccCCchhcCcCcccCCeEEE
Confidence 444444555555544 5688899999999999999999999888888999999988777654322211111 12234556
Q ss_pred EccCCCC
Q 025550 191 SHGMADR 197 (251)
Q Consensus 191 ~~g~~D~ 197 (251)
||.+.+.
T Consensus 204 IHT~~g~ 210 (338)
T d1bu8a2 204 IHTDSAP 210 (338)
T ss_dssp ECSCCSC
T ss_pred EEeCCcc
Confidence 7766554
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.87 E-value=8.3e-10 Score=89.28 Aligned_cols=122 Identities=21% Similarity=0.219 Sum_probs=79.5
Q ss_pred CCCCCccEEEEEecCCC---CCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCCh
Q 025550 34 QNPMARNFILWLHGLGD---SGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDE 109 (251)
Q Consensus 34 ~~~~~~~~vv~~HG~~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 109 (251)
...++.|++|++||++. +...+.. ....+.+.+..++.+.||...- | ++...+......+....
T Consensus 91 ~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~-------G-----Fl~~~~~~~~~~gN~Gl 158 (483)
T d1qe3a_ 91 TPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPF-------G-----FLHLSSFDEAYSDNLGL 158 (483)
T ss_dssp SSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHH-------H-----SCCCTTTCTTSCSCHHH
T ss_pred CCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccch-------h-----hcccccccccccccccc
Confidence 34567899999999873 2222222 2234445678899999985321 1 11111100011123345
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCC
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVP 170 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~ 170 (251)
.|...+++|+++.|. ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||...
T Consensus 159 ~Dq~~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~~ 218 (483)
T d1qe3a_ 159 LDQAAALKWVRENIS---AFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASR 218 (483)
T ss_dssp HHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHHH---HcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCcc
Confidence 677777888887777 7888999999999999999988776542 246899999998653
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.81 E-value=1.1e-08 Score=75.65 Aligned_cols=102 Identities=18% Similarity=0.143 Sum_probs=63.0
Q ss_pred EEEEEecCCCCCC---CchhhhhhhcCC--CcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhHHHHH
Q 025550 41 FILWLHGLGDSGP---ANEPIKTLFTSP--EFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESSLLKA 115 (251)
Q Consensus 41 ~vv~~HG~~~~~~---~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 115 (251)
.||++||.+++.. .+..+.+.+.+. |+.++.+++..... .... ..-...+.+.
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~-----------~~~~-----------~~~~~~~~~~ 64 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLR-----------EDVE-----------NSFFLNVNSQ 64 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHH-----------HHHH-----------HHHHSCHHHH
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcc-----------cccc-----------cchhhhHHHH
Confidence 4889999987644 466666666654 77777776531100 0000 0001123444
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcCC-CcceEEEecc
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYPR-KLGGGAIFSG 167 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-~~~~~i~~~~ 167 (251)
++.+.+.+. +.....+++-++||||||.++-.++.+.+. .+..+|.+++
T Consensus 65 ~e~v~~~I~---~~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITLgs 114 (279)
T d1ei9a_ 65 VTTVCQILA---KDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp HHHHHHHHH---SCGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred HHHHHHHHH---hccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEECC
Confidence 444444443 221234689999999999999999988875 4788888876
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.76 E-value=4.6e-09 Score=85.56 Aligned_cols=121 Identities=17% Similarity=0.248 Sum_probs=76.4
Q ss_pred CCCCccEEEEEecCC---CCCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLG---DSGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~---~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
.+++.|++|++||++ +++..+..-.. .....+..++.+.||...- | ++...+.+....+.....
T Consensus 93 ~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~~-------G-----Fl~~~~~~~~~~~N~Gl~ 160 (517)
T d1ukca_ 93 SQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGAL-------G-----FLASEKVRQNGDLNAGLL 160 (517)
T ss_dssp TTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHH-------H-----HCCCHHHHHSSCTTHHHH
T ss_pred CCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccce-------e-----ecCccccccccccchhHH
Confidence 345679999999977 33333332111 2334667888889985321 1 111100000011233456
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc----CCCcceEEEeccCCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY----PRKLGGGAIFSGWVP 170 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----p~~~~~~i~~~~~~~ 170 (251)
|...+++|+++.|. ..+-|+++|.|+|+|.||..+...+... ...+..+|+.||...
T Consensus 161 Dq~~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 161 DQRKALRWVKQYIE---QFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHHHHHHH---hhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccc
Confidence 77778888888777 7888999999999999999887554432 236899999998554
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.69 E-value=7.3e-09 Score=84.60 Aligned_cols=117 Identities=19% Similarity=0.204 Sum_probs=77.9
Q ss_pred CCCCccEEEEEecCCC---CCCCchhhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChhH
Q 025550 35 NPMARNFILWLHGLGD---SGPANEPIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDESS 111 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 111 (251)
.+.+.|++|++||++. ++..+. -...+...+..++.+.||...- | |+..... ...+.....|
T Consensus 109 ~~~~lPV~v~ihGG~~~~gs~~~~~-~~~~~~~~~vIvVt~nYRLg~~-------G-----Fl~~~~~--~~~gN~Gl~D 173 (532)
T d2h7ca1 109 KKNRLPVMVWIHGGGLMVGAASTYD-GLALAAHENVVVVTIQYRLGIW-------G-----FFSTGDE--HSRGNWGHLD 173 (532)
T ss_dssp SCCCEEEEEEECCSTTTSCCSTTSC-CHHHHHHHTCEEEEECCCCHHH-------H-----HCCCSST--TCCCCHHHHH
T ss_pred CCCCcEEEEEEeCCcccccccccCC-chhhhhcCceEEEEEeeccCCC-------c-----ccccccc--ccccccccHH
Confidence 4456899999999773 333332 2234566889999999984321 1 1111110 1112334566
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 112 LLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 112 ~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
...+++|+++.|. ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||..
T Consensus 174 q~~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~ 230 (532)
T d2h7ca1 174 QVAALRWVQDNIA---SFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVA 230 (532)
T ss_dssp HHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCT
T ss_pred HHHHHHHHHHHHH---HhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhcccc
Confidence 7777777777777 7888999999999999999888776542 34688999999744
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.67 E-value=4.2e-09 Score=86.13 Aligned_cols=120 Identities=19% Similarity=0.209 Sum_probs=76.2
Q ss_pred CCCCccEEEEEecCCC---CCCCc--hhhhh--hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGD---SGPAN--EPIKT--LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPK 107 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~--~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~ 107 (251)
.+++.|++|++||++. ++..| ..++. .+..+++.++.+.||...- | |+..........+..
T Consensus 110 ~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~-------G-----Fl~~~~~~~~~~gN~ 177 (534)
T d1llfa_ 110 AGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASW-------G-----FLAGDDIKAEGSGNA 177 (534)
T ss_dssp TTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHH-------H-----HCCSHHHHHHTCTTH
T ss_pred CCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcc-------c-----ccCCccccccccccc
Confidence 4568899999999873 22222 22332 4567899999999985322 1 111100000011123
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc-----C---CCcceEEEeccCC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY-----P---RKLGGGAIFSGWV 169 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----p---~~~~~~i~~~~~~ 169 (251)
...|...+++|+++.|. ..+-|+++|.|+|+|.||..+...+... | ..+..+|+.||..
T Consensus 178 Gl~Dq~~AL~WV~~nI~---~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs~ 244 (534)
T d1llfa_ 178 GLKDQRLGMQWVADNIA---GFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAM 244 (534)
T ss_dssp HHHHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCS
T ss_pred chhHHHHHHHHHHhhhh---hhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCcc
Confidence 45667777778877777 7888999999999999999776554421 1 2488899998743
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.67 E-value=3.7e-09 Score=86.60 Aligned_cols=119 Identities=16% Similarity=0.211 Sum_probs=76.9
Q ss_pred CCCCccEEEEEecCCCCCC---Cc--hhhhh--hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCC
Q 025550 35 NPMARNFILWLHGLGDSGP---AN--EPIKT--LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPK 107 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~~~~---~~--~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~ 107 (251)
.+++.|++|++||++.... .+ ..+.. .....+..++.+.||...- | ++...+......+..
T Consensus 118 ~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~-------G-----fl~~~~~~~~~~gN~ 185 (544)
T d1thga_ 118 PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPF-------G-----FLGGDAITAEGNTNA 185 (544)
T ss_dssp TTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHH-------H-----HCCSHHHHHHTCTTH
T ss_pred CCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccc-------c-----ccCCchhhccccccH
Confidence 4467899999999774321 11 22222 3456788899999984322 1 111000000011233
Q ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--------CCCcceEEEeccC
Q 025550 108 DESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--------PRKLGGGAIFSGW 168 (251)
Q Consensus 108 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------p~~~~~~i~~~~~ 168 (251)
...|...+++|+++.|. ..+-|+++|.|+|+|.||..+..+++.. ...+..+|+.||.
T Consensus 186 Gl~Dq~~AL~WV~~nI~---~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 186 GLHDQRKGLEWVSDNIA---NFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred HHHHhhhhhhhhhhhhc---ccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 45677777888888777 7888999999999999998887666532 1368999999984
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=1.9e-08 Score=81.97 Aligned_cols=119 Identities=18% Similarity=0.153 Sum_probs=76.4
Q ss_pred CCCCccEEEEEecCCC---CCCCchh-hhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLGD---SGPANEP-IKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..++.|++|++||++. ++..... .....+..+..++.+.||...- +|+..... ....+.....
T Consensus 100 ~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~------------Gfl~~~~~-~~~~gN~Gl~ 166 (526)
T d1p0ia_ 100 KPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGAL------------GFLALPGN-PEAPGNMGLF 166 (526)
T ss_dssp CCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHH------------HHCCCTTC-TTSCSCHHHH
T ss_pred CCCCCceEEEEECCCcccccCcccccCccccccccceeEEecccccccc------------cccCCCCc-cccccccccc
Confidence 4567899999999873 2222222 1123345688889999984311 11111000 0112233457
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
|...+++|+++.|+ ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||..
T Consensus 167 Dq~~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 167 DQQLALQWVQKNIA---AFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp HHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred chhhhhhhHHHHHH---HhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 77778888888777 7888999999999999999987655432 23588888888754
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.65 E-value=1e-08 Score=83.75 Aligned_cols=119 Identities=24% Similarity=0.259 Sum_probs=77.3
Q ss_pred CCCCccEEEEEecCCC---CCCCch-hhhhhhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLGD---SGPANE-PIKTLFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..++.|++|++||++. ++.... .....+...+..++.+.||...- | ++.... .....+.....
T Consensus 102 ~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vvvVt~nYRlg~~-------G-----Fl~~~~-~~~~~gN~Gl~ 168 (532)
T d1ea5a_ 102 RPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAF-------G-----FLALHG-SQEAPGNVGLL 168 (532)
T ss_dssp CCSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHH-------H-----HCCCTT-CSSSCSCHHHH
T ss_pred CCCCCcEEEEEEcCCcccccCCccccCcchhhcccCccEEEEeeccccc-------c-----cccccc-ccCCCCcccch
Confidence 4467899999999763 222211 12224556788889999984321 1 111100 00111233457
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWV 169 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~ 169 (251)
|...+++|+++.|. ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||..
T Consensus 169 Dq~~AL~WV~~nI~---~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 169 DQRMALQWVHDNIQ---FFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred hHHHHHHHHHHHHH---hhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 77777888888777 7888999999999999999887766542 24688999888754
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.65 E-value=1.5e-08 Score=82.90 Aligned_cols=119 Identities=19% Similarity=0.173 Sum_probs=77.5
Q ss_pred CCCCccEEEEEecCCC---CCCCchhhhh-hhcCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCCCCChh
Q 025550 35 NPMARNFILWLHGLGD---SGPANEPIKT-LFTSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASSPKDES 110 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 110 (251)
..++.|++|++||++. ++.....-.. ..+..+..++.+.||...- | |+.... .....+.....
T Consensus 108 ~~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~-------G-----fl~~~~-~~~~~gN~Gl~ 174 (542)
T d2ha2a1 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTF-------G-----FLALPG-SREAPGNVGLL 174 (542)
T ss_dssp CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHH-------H-----HCCCTT-CSSCCSCHHHH
T ss_pred CCCCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccce-------e-----eecccc-cccCCCcCCcc
Confidence 3467799999999873 2322222112 3345788899999984321 1 111000 00112233457
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhcC--CCcceEEEeccCC
Q 025550 111 SLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLYP--RKLGGGAIFSGWV 169 (251)
Q Consensus 111 ~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p--~~~~~~i~~~~~~ 169 (251)
|...+++|+++.|. ..+-|+++|.|+|+|.||..+..++.... ..+..+|+.||..
T Consensus 175 Dq~~AL~WV~~nI~---~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 175 DQRLALQWVQENIA---AFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cHHHHHHHHHHHHH---HhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 77777888888777 78889999999999999999987766432 4688999998844
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.63 E-value=1.1e-08 Score=84.21 Aligned_cols=121 Identities=14% Similarity=0.154 Sum_probs=75.9
Q ss_pred CCCCccEEEEEecCCC---CCCCchhhhhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccC-----CCCCCCC
Q 025550 35 NPMARNFILWLHGLGD---SGPANEPIKTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHE-----IPVTASS 105 (251)
Q Consensus 35 ~~~~~~~vv~~HG~~~---~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~-----~~~~~~~ 105 (251)
.+++.|++|++||++. ++.....-...+ +..+..++.+.||...- +|+.... .+....+
T Consensus 135 ~~~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~f------------GFl~~~~~~~~~~~~~~~g 202 (571)
T d1dx4a_ 135 TTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAF------------GFLHLAPEMPSEFAEEAPG 202 (571)
T ss_dssp CCSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHH------------HHCCCGGGSCGGGTTSSCS
T ss_pred CCCCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccc------------cccccccccccccccCCCC
Confidence 4578899999999873 222221111233 33467778888985421 1111100 0001122
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc--CCCcceEEEeccCCC
Q 025550 106 PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY--PRKLGGGAIFSGWVP 170 (251)
Q Consensus 106 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~~~~~~i~~~~~~~ 170 (251)
.....|...+++|+++.|. ..+-|+++|.|+|+|.||..+..++... ...+..+|+.||...
T Consensus 203 N~Gl~Dq~~AL~WV~~nI~---~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 203 NVGLWDQALAIRWLKDNAH---AFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp CHHHHHHHHHHHHHHHSTG---GGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred cccchHHHHHHHHHHHhhh---hhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 3345677777777777777 7888999999999999999988666543 235888888887443
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.53 E-value=2.8e-08 Score=81.89 Aligned_cols=117 Identities=17% Similarity=0.194 Sum_probs=74.2
Q ss_pred CCCccEEEEEecCC---CCCCC--chh--h--hhhh-cCCCcceEEEEccCCCCCCcccCCCCcCCccccccCCCCCCCC
Q 025550 36 PMARNFILWLHGLG---DSGPA--NEP--I--KTLF-TSPEFKLTKWSFPSAPNNPVTCNYGAVMPSWFDIHEIPVTASS 105 (251)
Q Consensus 36 ~~~~~~vv~~HG~~---~~~~~--~~~--~--~~~~-~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~~ 105 (251)
+++.|++||+||++ +++.. +.. + ...+ ...+..++.+.||...- | ++.... ....+
T Consensus 95 ~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~-------G-----Fl~~~~--~~~~g 160 (579)
T d2bcea_ 95 SHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPL-------G-----FLSTGD--SNLPG 160 (579)
T ss_dssp CCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHH-------H-----HCCCSS--TTCCC
T ss_pred CCCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeeccccccc-------c-----cccccc--cCCCc
Confidence 45789999999977 22221 111 1 1223 33468888999984321 1 111111 01122
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh--cCCCcceEEEeccCC
Q 025550 106 PKDESSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL--YPRKLGGGAIFSGWV 169 (251)
Q Consensus 106 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~--~p~~~~~~i~~~~~~ 169 (251)
.....|...+++|+++.|. ..+-|+++|.|+|+|.||..+..++.. ....+..+|+.||..
T Consensus 161 N~Gl~Dq~~AL~WV~~nI~---~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 161 NYGLWDQHMAIAWVKRNIE---AFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp CHHHHHHHHHHHHHHHHGG---GGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred cchhhHHHHHHHHHhhhhh---hhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 3345777777888887777 788899999999999999988866654 234689999999743
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.32 E-value=7.3e-07 Score=68.79 Aligned_cols=22 Identities=32% Similarity=0.363 Sum_probs=18.8
Q ss_pred CcEEEEEeChhHHHHHHHHHhc
Q 025550 134 NNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 134 ~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
++|-|+||||||..+-+++...
T Consensus 105 ~kVnLIgHS~GGld~Ryl~~~l 126 (388)
T d1ku0a_ 105 GRVHIIAHSQGGQTARMLVSLL 126 (388)
T ss_dssp CCEEEEEETTHHHHHHHHHHHH
T ss_pred CceeEeecccccHHHHHHHHHh
Confidence 5899999999999988877644
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.12 E-value=3.8e-05 Score=60.81 Aligned_cols=66 Identities=20% Similarity=0.181 Sum_probs=50.8
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHHhc--------------------C-----CeeEEEEeCCCCCCCCHHHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLEQA--------------------G-----ISCEFKAYPGLGHSISNEELRNL 238 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~~~--------------------~-----~~~~~~~~~g~~H~~~~~~~~~~ 238 (251)
.+.+|++.+|..|-.++.-..+.+.+.|.-. | ...++..+.++||....+.++..
T Consensus 360 ~~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V~~AGHmVP~dqP~~a 439 (452)
T d1ivya_ 360 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 439 (452)
T ss_dssp TCCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHH
T ss_pred CCCEEEEEeCCcceeCCCHHHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEECCccccCcccCHHHH
Confidence 4689999999999999987766666655311 0 13557788999999988888888
Q ss_pred HHHHHHhhcCC
Q 025550 239 ESWIKTRMSCS 249 (251)
Q Consensus 239 ~~~l~~~l~~~ 249 (251)
.+.|++++..+
T Consensus 440 ~~m~~~fi~g~ 450 (452)
T d1ivya_ 440 FTMFSRFLNKQ 450 (452)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 88888888765
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.96 E-value=0.00017 Score=56.46 Aligned_cols=65 Identities=17% Similarity=0.104 Sum_probs=47.6
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHH--------hcC-------------------CeeEEEEeCCCCCCCCHHHHH
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLE--------QAG-------------------ISCEFKAYPGLGHSISNEELR 236 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~--------~~~-------------------~~~~~~~~~g~~H~~~~~~~~ 236 (251)
.+.+|++..|+.|..++....+.+.+.|. ... ...++..+.|+||....+.++
T Consensus 326 ~~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V~~AGHmvP~d~P~ 405 (421)
T d1wpxa1 326 QDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPE 405 (421)
T ss_dssp TTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEETTCCSSHHHHCHH
T ss_pred cCCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEECCccccCcccCHH
Confidence 45799999999999999876665555442 110 125777889999998877777
Q ss_pred HHHHHHHHhhcC
Q 025550 237 NLESWIKTRMSC 248 (251)
Q Consensus 237 ~~~~~l~~~l~~ 248 (251)
...+.|.+++..
T Consensus 406 ~a~~m~~~fi~G 417 (421)
T d1wpxa1 406 NALSMVNEWIHG 417 (421)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 777777777653
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=97.88 E-value=8.6e-05 Score=59.25 Aligned_cols=65 Identities=11% Similarity=-0.011 Sum_probs=49.9
Q ss_pred CCCCEEEEccCCCCcccchhcccchHHHH--------hc--------------------C-----CeeEEEEeCCCCCCC
Q 025550 184 KKTPILWSHGMADRTVLFEAGQAGPPFLE--------QA--------------------G-----ISCEFKAYPGLGHSI 230 (251)
Q Consensus 184 ~~~p~l~~~g~~D~~~~~~~~~~~~~~l~--------~~--------------------~-----~~~~~~~~~g~~H~~ 230 (251)
.+.+|++.+|+.|..++....+.+.+.|+ +. | ...++..+.++||..
T Consensus 371 ~girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmv 450 (483)
T d1ac5a_ 371 SGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMV 450 (483)
T ss_dssp TTCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSH
T ss_pred CCCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccC
Confidence 45799999999999999876666665552 00 0 137788999999999
Q ss_pred CHHHHHHHHHHHHHhhcC
Q 025550 231 SNEELRNLESWIKTRMSC 248 (251)
Q Consensus 231 ~~~~~~~~~~~l~~~l~~ 248 (251)
..+.+....+.|+++|..
T Consensus 451 P~dqP~~a~~mi~~fl~~ 468 (483)
T d1ac5a_ 451 PFDKSLVSRGIVDIYSND 468 (483)
T ss_dssp HHHCHHHHHHHHHHHTTC
T ss_pred cccCHHHHHHHHHHHhCC
Confidence 988888888888888764
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=96.63 E-value=0.025 Score=38.67 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=57.7
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhcC----CCcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCcccchhcccc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLYP----RKLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRTVLFEAGQAG 207 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~~~~~~~~~~ 207 (251)
+..+++|+|+|+|+.++-.++...+ +++.++++++-....... ...+....-.+.-++-..|.+..... .
T Consensus 94 P~tkiVL~GYSQGA~V~~~~~~~l~~~~~~~V~avvlfGDP~~~~~~---g~~p~~~~~r~~~~C~~gD~vC~~g~--~- 167 (197)
T d1cexa_ 94 PDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTVLFGYTKNLQNR---GRIPNYPADRTKVFCNTGDLVCTGSL--I- 167 (197)
T ss_dssp TTCEEEEEEETHHHHHHHHHHHHSCHHHHTTEEEEEEESCTTTTTTT---TCCTTSCGGGEEEECCTTCGGGGTCC--C-
T ss_pred CCCeEEEeeeccccHhhhcccccCChhhhhhEEEEEEEeCCCCCCCC---CCCCCCcchhhheecCCCCCeeCCCC--C-
Confidence 5679999999999999988877653 468888887742211110 00001112346778888888765321 0
Q ss_pred hHHHHhcCCeeEEEEeCCCCCCCCHHH-HHHHHHHHHHhhc
Q 025550 208 PPFLEQAGISCEFKAYPGLGHSISNEE-LRNLESWIKTRMS 247 (251)
Q Consensus 208 ~~~l~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~ 247 (251)
.-..|.-.... .++..+|+.+.++
T Consensus 168 ----------------~~~~H~~Y~~~~~~~Aa~fv~~k~~ 192 (197)
T d1cexa_ 168 ----------------VAAPHLAYGPDARGPAPEFLIEKVR 192 (197)
T ss_dssp ----------------CCGGGGCCHHHHHTHHHHHHHHHHH
T ss_pred ----------------CccchhchhhchhhHHHHHHHHHHh
Confidence 01257654333 4678889888774
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.62 E-value=0.0025 Score=46.18 Aligned_cols=80 Identities=21% Similarity=0.156 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh----cCCC---cceEEEeccCCCCcchhhhhhcccCCCCCE
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL----YPRK---LGGGAIFSGWVPFNASLIDQFTSDAKKTPI 188 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----~p~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~ 188 (251)
.+.+...++++++.. +..+|.+.|||+||.+|..++.. .|.. .-.++.++..--....+.+.+.. ...+.
T Consensus 116 ~~~i~~~v~~~~~~~-~~~~i~vtGHSLGGAlA~L~a~~l~~~~~~~~~~~i~~~tFG~PrvGn~~fa~~~~~--~~~~~ 192 (265)
T d1lgya_ 116 VNDYFPVVQEQLTAH-PTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGGPRVGNPTFAYYVES--TGIPF 192 (265)
T ss_dssp HHHHHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHHHHHHCTTCSTTTEEEEEESCCCCBCHHHHHHHHH--HCCCE
T ss_pred HHHHHHHHHHHHhhC-CCceEEEEecccchHHHHHHHHHHHHhCcccCCCcceEEEecCccccCHHHHHHHhh--cCceE
Confidence 344444444443222 34689999999999999888764 2321 12345555543333334333322 23455
Q ss_pred EEEccCCCCc
Q 025550 189 LWSHGMADRT 198 (251)
Q Consensus 189 l~~~g~~D~~ 198 (251)
+=+.-.+|.+
T Consensus 193 ~Riv~~~D~V 202 (265)
T d1lgya_ 193 QRTVHKRDIV 202 (265)
T ss_dssp EEEEETTBSG
T ss_pred EEEEECCCcc
Confidence 5555667755
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.58 E-value=0.013 Score=42.33 Aligned_cols=65 Identities=18% Similarity=-0.009 Sum_probs=36.5
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhc----CC---CcceEEEeccCCCCcchhhhhhcccCCCCCEEEEccCCCCc
Q 025550 132 DPNNVFVCGFSQGGALTLASVLLY----PR---KLGGGAIFSGWVPFNASLIDQFTSDAKKTPILWSHGMADRT 198 (251)
Q Consensus 132 ~~~~i~l~G~S~Gg~~a~~~a~~~----p~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~~~g~~D~~ 198 (251)
+..+|.+.|||+||.+|..++... +. .--.++.++..--....+.+.+.. ...+.+-+.-.+|.+
T Consensus 130 ~~~~i~vtGHSLGGAlA~L~a~~l~~~~~~~~~~~i~~~TFG~PrvGn~~fa~~~~~--~~~~~~Rvvn~~D~V 201 (265)
T d3tgla_ 130 PSYKVAVTGHSLGGATVLLCALDLYQREEGLSSSNLFLYTQGQPRVGDPAFANYVVS--TGIPYRRTVNERDIV 201 (265)
T ss_dssp TTSEEEEEEETHHHHHHHHHHHHHHHTCSSCCTTTEEEEEESCCCCBCHHHHHHHHH--TCCCEEEEEETTBSG
T ss_pred CCceEEEecccchHHHHHHHHHHHHHhccccCccccceeecCCCccCCHHHHHHHHh--cCceEEEEEecCCEE
Confidence 457899999999999999877542 11 111234444433233333333322 234555566667764
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.50 E-value=0.0034 Score=45.60 Aligned_cols=39 Identities=21% Similarity=0.242 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHhc
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLLY 155 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 155 (251)
.+.+...++++++.. +..++.+.|||+||.+|..++...
T Consensus 121 ~~~v~~~v~~~~~~~-~~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 121 ADTLRQKVEDAVREH-PDYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHHHHHC-TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCcceeeeccchHHHHHHHHHHHH
Confidence 344555555444222 346999999999999999888753
|
| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.40 E-value=0.0031 Score=45.84 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 117 RNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 117 ~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
..+.+.++++... .+..++.+.|||+||.+|..++..
T Consensus 121 ~~i~~~i~~~~~~-~~~~~i~iTGHSLGGAlA~L~a~~ 157 (271)
T d1tiaa_ 121 DDIIKELKEVVAQ-NPNYELVVVGHSLGAAVATLAATD 157 (271)
T ss_pred HHHHHHHHHHHHh-CCCceEEEeccchHHHHHHHHHHH
Confidence 3344444443322 234689999999999999988765
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.38 E-value=0.0043 Score=44.79 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHHh
Q 025550 116 VRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVLL 154 (251)
Q Consensus 116 ~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 154 (251)
.+.+...+..+.... +..++.+.|||+||.+|..++..
T Consensus 108 ~~~i~~~i~~~~~~~-~~~~i~vTGHSLGGAlA~L~a~~ 145 (261)
T d1uwca_ 108 QDQVESLVKQQASQY-PDYALTVTGHSLGASMAALTAAQ 145 (261)
T ss_dssp HHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhC-CCcceEEeccchhHHHHHHHHHH
Confidence 344444454443222 34689999999999999987755
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=94.86 E-value=0.022 Score=39.38 Aligned_cols=43 Identities=16% Similarity=0.269 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
.+..+-+..+...+...... .+..+++|+|+|+|+.++..++.
T Consensus 59 ~S~~~G~~~~~~~i~~~~~~-CP~tkivl~GYSQGA~V~~~~l~ 101 (207)
T d1qoza_ 59 NSVVNGTNAAAAAINNFHNS-CPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEETHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHh-CCCCeEEEEeeccchHHHHHHHh
Confidence 34455566666666655422 35579999999999999987764
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=94.74 E-value=0.024 Score=39.23 Aligned_cols=43 Identities=19% Similarity=0.357 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeChhHHHHHHHHH
Q 025550 110 SSLLKAVRNVHAMIDKEVAAGIDPNNVFVCGFSQGGALTLASVL 153 (251)
Q Consensus 110 ~~~~~~~~~l~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 153 (251)
.+..+-+..+...+....+.- +..+++|+|+|+|+.++..++.
T Consensus 59 ~Sv~~G~~~~~~~i~~~~~~C-P~tk~vl~GYSQGA~V~~~~l~ 101 (207)
T d1g66a_ 59 SSVAQGIAAVASAVNSFNSQC-PSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-TTCEEEEEEETHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhC-CCCcEEEEeeccccHHHHHHHh
Confidence 455556666666666554332 4569999999999999987664
|