Citrus Sinensis ID: 025630

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
MGSDAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPINI
cccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHHcccccccEEEEccccccccHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccEEEEEcccc
cccccccccccEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccccccccEEEEEEccc
mgsdayvplfetkRAKGRVIRRLFAASIFVGIGFIVVYRlshrprngedgRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQryendlpgvdifvctadpkteqpiMVINTVLSVMaydypteklsvylsddaahdITFYALIEASHFaehwipyckkfyveprspgayfqsisepheaeEAKGFLAIKKLYEDMENGIITAAklgripeevrskykgfsqwdsffsqrdhdtilqvcpini
mgsdayvplfetkrakgrvIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCtadpkteqpIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITaaklgripeeVRSKYKGFsqwdsffsqrdhdtilqvcpini
MGSDAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPINI
*****YVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQS*********AKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPI**
*****YV***ETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGA*******************IKKLYEDMEN**********IPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPINI
MGSDAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPINI
*****YVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPINI
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGSDAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDTILQVCPINI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query250 2.2.26 [Sep-21-2011]
Q0DXZ1 745 Cellulose synthase-like p yes no 0.948 0.318 0.545 6e-73
Q651X7 737 Cellulose synthase-like p no no 0.948 0.321 0.525 6e-71
Q651X6 728 Cellulose synthase-like p no no 0.944 0.324 0.518 3e-70
Q8VZK9 729 Cellulose synthase-like p yes no 0.936 0.320 0.543 2e-66
Q570S7 760 Cellulose synthase-like p no no 0.736 0.242 0.416 2e-37
Q6YVM4 1092 Probable cellulose syntha no no 0.848 0.194 0.400 2e-35
Q0WVN5 751 Cellulose synthase-like p no no 0.712 0.237 0.405 2e-35
Q8L778 1069 Cellulose synthase A cata no no 0.948 0.221 0.353 2e-34
Q84M43 1073 Probable cellulose syntha no no 0.856 0.199 0.372 4e-34
A2XN66 1073 Probable cellulose syntha N/A no 0.856 0.199 0.372 4e-34
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function desciption
 Score =  273 bits (699), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 133/244 (54%), Positives = 174/244 (71%), Gaps = 7/244 (2%)

Query: 8   PLFETKRAKGRVIR---RLFAASIFVGIGFIVVYRLSHRPRNGEDG--RWAWIGLLGAEL 62
           PLF T++  GR+     R+ AA++F G+  I +YR +H P  G DG  RWAW+G+L AEL
Sbjct: 18  PLFATEK-PGRMAMAAYRVSAATVFAGVLLIWLYRATHLPPGGGDGVRRWAWLGMLAAEL 76

Query: 63  WFSLYWVLTQALRWNCVYRRTFKDRLSQRY-ENDLPGVDIFVCTADPKTEQPIMVINTVL 121
           WF  YWVLT ++RW  VYRRTFKDRL+Q Y E++LP VDIFVCTADP  E P++VI+TVL
Sbjct: 77  WFGFYWVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEPPMLVISTVL 136

Query: 122 SVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSI 181
           SVMAYDY  EKL++YLSDDA   +TFY L EAS FA+HWIP+CKK+ VEPRSP AYF  +
Sbjct: 137 SVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYFAKV 196

Query: 182 SEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDHDT 241
           + P +    K +  +K+LY+DM + + +    GRIPE  R   +GFSQW+  F+  DH +
Sbjct: 197 ASPPDGCGPKEWFTMKELYKDMTDRVNSVVNSGRIPEVPRCHSRGFSQWNENFTSSDHPS 256

Query: 242 ILQV 245
           I+Q+
Sbjct: 257 IVQI 260
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q6YVM4|CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q8L778|CESA5_ARATH Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2 Back     alignment and function description
>sp|Q84M43|CESA2_ORYSJ Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1 Back     alignment and function description
>sp|A2XN66|CESA2_ORYSI Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query250
255563554 728 cellulose synthase, putative [Ricinus co 0.98 0.336 0.703 6e-97
359494189 922 PREDICTED: cellulose synthase-like prote 0.972 0.263 0.693 2e-96
356524372 934 PREDICTED: cellulose synthase-like prote 0.98 0.262 0.678 3e-93
224061234 736 predicted protein [Populus trichocarpa] 0.976 0.331 0.668 7e-93
429326508 736 cellulose synthase-like protein [Populus 0.976 0.331 0.668 8e-93
356527159 736 PREDICTED: cellulose synthase-like prote 0.976 0.331 0.645 1e-87
357460133 732 Cellulose synthase-like protein E1 [Medi 0.96 0.327 0.630 5e-87
357460139 736 Cellulose synthase-like protein E1 [Medi 0.968 0.328 0.620 1e-86
296089936 710 unnamed protein product [Vitis vinifera] 0.884 0.311 0.695 1e-86
255563552 938 coated vesicle membrane protein, putativ 0.98 0.261 0.650 6e-86
>gi|255563554|ref|XP_002522779.1| cellulose synthase, putative [Ricinus communis] gi|223538017|gb|EEF39630.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  359 bits (921), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 173/246 (70%), Positives = 194/246 (78%), Gaps = 1/246 (0%)

Query: 1   MGSDAYVPLFETKRAKGRVIRRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGA 60
           MGSD + PLFET+RAKGRV  RLFAA++FVGI  I  YRL H PR GEDGRW WIGLLGA
Sbjct: 1   MGSDKHTPLFETRRAKGRVFYRLFAATVFVGICLIWAYRLIHMPREGEDGRWVWIGLLGA 60

Query: 61  ELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTV 120
           ELWF LYWV+TQ+LRW  VYR TFKDRLS RY+N+LP VDIFVCTADP  E P MVINTV
Sbjct: 61  ELWFGLYWVITQSLRWQPVYRHTFKDRLSNRYQNNLPQVDIFVCTADPTIEPPAMVINTV 120

Query: 121 LSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQS 180
           LSVM  DYP+++ SVYLSDD    +TFYA++EAS FA  WIPYCKK+ V PRSP AYF  
Sbjct: 121 LSVMTSDYPSKRFSVYLSDDGGSVLTFYAMLEASQFARIWIPYCKKYNVGPRSPAAYFVP 180

Query: 181 ISEPH-EAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKYKGFSQWDSFFSQRDH 239
            S  H E    + FLAIKKLYE+ME+ I TA KLGRIPEE R K+KGFSQWDS+ SQRDH
Sbjct: 181 TSNHHNEFGGTEEFLAIKKLYEEMEDRIETATKLGRIPEEARRKHKGFSQWDSYSSQRDH 240

Query: 240 DTILQV 245
           DTILQ+
Sbjct: 241 DTILQI 246

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359494189|ref|XP_002266196.2| PREDICTED: cellulose synthase-like protein E1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356524372|ref|XP_003530803.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max] Back     alignment and taxonomy information
>gi|224061234|ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|429326508|gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|356527159|ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max] Back     alignment and taxonomy information
>gi|357460133|ref|XP_003600348.1| Cellulose synthase-like protein E1 [Medicago truncatula] gi|355489396|gb|AES70599.1| Cellulose synthase-like protein E1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|357460139|ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago truncatula] gi|355489399|gb|AES70602.1| Cellulose synthase-like protein E1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|296089936|emb|CBI39755.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255563552|ref|XP_002522778.1| coated vesicle membrane protein, putative [Ricinus communis] gi|223538016|gb|EEF39629.1| coated vesicle membrane protein, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query250
TAIR|locus:2012050 729 CSLE1 "AT1G55850" [Arabidopsis 0.928 0.318 0.551 8.8e-63
TAIR|locus:2138126 760 CSLG1 "AT4G24010" [Arabidopsis 0.732 0.240 0.419 9.3e-37
TAIR|locus:2138106 751 CSLG3 "AT4G23990" [Arabidopsis 0.736 0.245 0.401 1.8e-35
TAIR|locus:2138116 722 CSLG2 "AT4G24000" [Arabidopsis 0.88 0.304 0.357 1.2e-34
TAIR|locus:2178193 1069 CESA5 "cellulose synthase 5" [ 0.9 0.210 0.363 5.2e-34
TAIR|locus:2040080 1065 CESA10 "cellulose synthase 10" 0.836 0.196 0.375 8.4e-34
TAIR|locus:2124167 985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.904 0.229 0.359 1.2e-33
TAIR|locus:2136308 1084 CESA2 "cellulose synthase A2" 0.828 0.190 0.371 1.8e-33
TAIR|locus:2052576 1088 CESA9 "cellulose synthase A9" 0.828 0.190 0.371 4.9e-33
TAIR|locus:2127776 1081 CESA1 "cellulose synthase 1" [ 0.828 0.191 0.373 1e-32
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 134/243 (55%), Positives = 165/243 (67%)

Query:     8 PLFETKRAKGRVIR-RLFAASIFVGIGFIVVYRLSHRPRNGED-GRWAWIGLLGAELWFS 65
             PLFET+R  GRVI  R F+AS+FV I  I  YR+     N     R  W  +   E+WF 
Sbjct:    18 PLFETRRRTGRVIAYRFFSASVFVCICLIWFYRIGEIGDNRTVLDRLIWFVMFIVEIWFG 77

Query:    66 LYWVLTQALRWNCVYRRTFKDRLSQRYENDLPGVDIFVCTADPKTEQPIMVINTVLSVMA 125
             LYWV+TQ+ RWN V+R  F DRLS+RY +DLP +D+FVCTADP  E P++V+NTVLSV A
Sbjct:    78 LYWVVTQSSRWNPVWRFPFSDRLSRRYGSDLPRLDVFVCTADPVIEPPLLVVNTVLSVTA 137

Query:   126 YDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSPGAYFQSISE-- 183
              DYP EKL+VYLSDD   ++TFYAL EA+ FA+ W+P+CKKF VEP SP AY  S +   
Sbjct:   138 LDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCL 197

Query:   184 PHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSKY-KGFSQWDSFFSQRDHDTI 242
                AEE      + KLY +M   I TAA+LGRIPEE R KY  GFSQWD+  ++R+H TI
Sbjct:   198 DSAAEE------VAKLYREMAARIETAARLGRIPEEARVKYGDGFSQWDADATRRNHGTI 251

Query:   243 LQV 245
             LQV
Sbjct:   252 LQV 254
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0009832 "plant-type cell wall biogenesis" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00033394001
SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (732 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query250
PLN02893 734 PLN02893, PLN02893, Cellulose synthase-like protei 2e-57
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 2e-43
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 8e-43
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 2e-42
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 3e-42
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 1e-41
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 4e-41
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 7e-40
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 4e-38
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 1e-33
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-05
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 4e-05
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  194 bits (494), Expect = 2e-57
 Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 10/194 (5%)

Query: 57  LLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRY--ENDLPGVDIFVCTADPKTEQPI 114
           LL A++  +  W  TQA R   V+RR F + L + Y  E+D PG+D+F+CTADP  E P+
Sbjct: 60  LLLADIVLAFMWATTQAFRMCPVHRRVFIEHL-EHYAKESDYPGLDVFICTADPYKEPPM 118

Query: 115 MVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSP 174
            V+NT LSVMAYDYPTEKLSVY+SDD    +T +A +EA+ FA HW+P+CKK  +  R P
Sbjct: 119 GVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCP 178

Query: 175 GAYFQSISEPHEAEEAKGFLAIKKLYEDMENGIITAAKLGRIPEEVRSK---YKGFSQWD 231
            AYF S S     E  +    IK +YE M+  +    + G++  +  +     + FS+W 
Sbjct: 179 EAYFSSNSHSWSPETEQ----IKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWT 234

Query: 232 SFFSQRDHDTILQV 245
             F+++DH T++QV
Sbjct: 235 DKFTRQDHPTVIQV 248

Length = 734
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 250
PLN02436 1094 cellulose synthase A 100.0
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02893 734 Cellulose synthase-like protein 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PLN02190 756 cellulose synthase-like protein 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 99.87
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 99.87
COG1215 439 Glycosyltransferases, probably involved in cell wa 98.94
PRK05454 691 glucosyltransferase MdoH; Provisional 98.91
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 98.81
PRK14583 444 hmsR N-glycosyltransferase; Provisional 98.5
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 98.3
PRK11204 420 N-glycosyltransferase; Provisional 98.26
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 98.24
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 98.14
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 98.08
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.05
cd04191 254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 97.95
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 97.87
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 97.83
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 97.82
cd06438183 EpsO_like EpsO protein participates in the methano 97.78
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 97.64
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 97.59
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 97.58
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 97.57
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 97.51
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 97.47
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 97.41
COG0463 291 WcaA Glycosyltransferases involved in cell wall bi 97.36
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 97.22
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 97.18
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 97.13
PTZ00260 333 dolichyl-phosphate beta-glucosyltransferase; Provi 97.08
cd06423180 CESA_like CESA_like is the cellulose synthase supe 96.94
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 96.94
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 96.89
PRK10073 328 putative glycosyl transferase; Provisional 96.89
PRK10018 279 putative glycosyl transferase; Provisional 96.84
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 96.77
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 96.76
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 96.73
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 96.71
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 96.71
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 96.68
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 96.66
cd02510 299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 96.51
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 96.49
PRK10063248 putative glycosyl transferase; Provisional 96.4
PRK13915 306 putative glucosyl-3-phosphoglycerate synthase; Pro 96.38
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 96.2
cd06442224 DPM1_like DPM1_like represents putative enzymes si 95.98
cd04188211 DPG_synthase DPG_synthase is involved in protein N 95.68
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 95.03
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 95.0
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 94.94
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 94.4
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 92.74
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 89.97
cd02514 334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 89.91
COG1216 305 Predicted glycosyltransferases [General function p 85.83
KOG2977 323 consensus Glycosyltransferase [General function pr 84.15
PF03142 527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 82.16
>PLN02436 cellulose synthase A Back     alignment and domain information 
Probab=100.00  E-value=1.6e-78  Score=619.71  Aligned_cols=240  Identities=35%  Similarity=0.631  Sum_probs=223.8

Q ss_pred             CCCCceeeeeccchhH--HHHHHHHHHHHHHHHHHHhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCc
Q 025630            5 AYVPLFETKRAKGRVI--RRLFAASIFVGIGFIVVYRLSHRPRNGEDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRR   82 (250)
Q Consensus         5 ~~~~l~~~~~~~~~~~--~R~~~~~~l~~l~~yl~wR~~tlp~~~~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~   82 (250)
                      ..+||+++.+++++.+  ||+++++++++++++|+||+++.+.+   +.|+|+++++||+||+|+|+|+|+.+|+|++|.
T Consensus       269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~---a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~  345 (1094)
T PLN02436        269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVND---AYGLWLTSVICEIWFAVSWILDQFPKWYPIERE  345 (1094)
T ss_pred             cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcc---cHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence            4568999999998876  99999999999999999999986554   689999999999999999999999999999999


Q ss_pred             Ccccchhhccc-----CCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHHHHHHHH
Q 025630           83 TFKDRLSQRYE-----NDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEASHFA  157 (250)
Q Consensus        83 ~~~d~L~~~~~-----~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~eaa~Fa  157 (250)
                      +++|||++|++     ++||+|||||||+||.||||.+|+|||||+||+|||+|||+|||||||||++||+||.|||+||
T Consensus       346 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA  425 (1094)
T PLN02436        346 TYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFA  425 (1094)
T ss_pred             eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence            99999999873     3599999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHhHHHhcCccccCCcccccCCCCCCcc----cchhHHHHHHHHHHHHHHHHHHHHhc-CCCChhhhhhccCCCCCCC
Q 025630          158 EHWIPYCKKFYVEPRSPGAYFQSISEPHEA----EEAKGFLAIKKLYEDMENGIITAAKL-GRIPEEVRSKYKGFSQWDS  232 (250)
Q Consensus       158 ~~wvpfC~k~~V~~r~P~~yF~~~~~~~~~----~~~~e~~~~k~~Ye~~k~ri~~~~~~-g~vp~~~~~~~~gf~~w~~  232 (250)
                      +.||||||||+|+|||||+||+++.+++++    ...+||+.|||||||||+|||++++. +++|++.|.|++| ++|++
T Consensus       426 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dg-t~W~g  504 (1094)
T PLN02436        426 RKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDG-TPWPG  504 (1094)
T ss_pred             HhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccC-ccCCC
Confidence            999999999999999999999998776533    35889999999999999999999976 9999999877777 89996


Q ss_pred             CCCCCCCcceeeEeccC
Q 025630          233 FFSQRDHDTILQVCPIN  249 (250)
Q Consensus       233 ~~~~~dH~~iiqv~~~n  249 (250)
                       ++++|||+|||||+||
T Consensus       505 -~~~~dHp~IIqVll~~  520 (1094)
T PLN02436        505 -NNVRDHPGMIQVFLGH  520 (1094)
T ss_pred             -CCCCCCccceEEEecC
Confidence             5889999999999986

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query250
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 99.74
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 97.75
3bcv_A240 Putative glycosyltransferase protein; protein stru 97.68
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 97.66
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 97.64
1qg8_A 255 Protein (spore coat polysaccharide biosynthesis P 97.62
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.59
3ckj_A 329 Putative uncharacterized protein; mycobacteria, un 97.16
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 96.6
3f1y_A 387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 96.48
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 96.1
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 95.09
1fo8_A 343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 93.89
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 89.97
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 89.08
2zu9_A 394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 87.26
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 83.28
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=99.74  E-value=4.5e-17  Score=164.88  Aligned_cols=144  Identities=21%  Similarity=0.184  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-cCCCCC-CchHHHHHHHHHHHHHHHHHHHHHhhhhceecCCcCcccchhhcccCCCCc
Q 025630           21 RRLFAASIFVGIGFIVVYRLS-HRPRNG-EDGRWAWIGLLGAELWFSLYWVLTQALRWNCVYRRTFKDRLSQRYENDLPG   98 (250)
Q Consensus        21 ~R~~~~~~l~~l~~yl~wR~~-tlp~~~-~~~~~~w~~l~~aEl~~~~~~~l~~~~~~~P~~R~~~~d~L~~~~~~~lP~   98 (250)
                      ..+++++.+++.++|++||++ ++|..+ ....+++++++++|+++.+.|+++++..++|..|.+.++.    .++++|.
T Consensus        66 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~----~~~~~P~  141 (802)
T 4hg6_A           66 RFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL----QPEELPT  141 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC----CTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC----CccCCCc
Confidence            334455555556799999999 777543 4456789999999999999999999999999999887653    1467999


Q ss_pred             ccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHH----HHHH-HHHHHHHhHhHHHhcCccc
Q 025630           99 VDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFY----ALIE-ASHFAEHWIPYCKKFYVEP  171 (250)
Q Consensus        99 VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~----al~e-aa~Fa~~wvpfC~k~~V~~  171 (250)
                      |+|+|||||   |++.++.+|+.|+++.|||.+++.|+|+|||+++-|++    ++.+ +.+-......+|+++++..
T Consensus       142 VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~  216 (802)
T 4hg6_A          142 VDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVY  216 (802)
T ss_dssp             EEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred             EEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEE
Confidence            999999999   99999999999999999999999999999999999974    2333 2222344557899998873
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query250
d1xhba2 328 Polypeptide N-acetylgalactosaminyltransferase 1, N 98.0
d1qg8a_ 255 Spore coat polysaccharide biosynthesis protein Sps 97.68
d1omza_ 265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 97.07
d2bo4a1 381 Mannosylglycerate synthase, MGS {Rhodothermus mari 89.87
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=2.3e-06  Score=73.66  Aligned_cols=56  Identities=20%  Similarity=0.196  Sum_probs=48.5

Q ss_pred             cCCCCcccEEEeCCCCCCCChHHHHHHHHHHhcCCCCCCCcEEEEcCCCCchhhHHHHH
Q 025630           93 ENDLPGVDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALI  151 (250)
Q Consensus        93 ~~~lP~VDVFI~Tynp~~EP~~vv~~TVls~lalDYP~~kl~VYv~DDG~s~~t~~al~  151 (250)
                      .+++|.|.|.|||||   |....+.+||-|++...||.....|.|.|||+++-|.....
T Consensus        18 ~~~~P~vSIIIp~yN---e~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l   73 (328)
T d1xhba2          18 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPL   73 (328)
T ss_dssp             CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHH
T ss_pred             CCCCCCEEEEEeccC---CcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHH
Confidence            567999999999999   98888999999999999995555799999999987765433
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure