Citrus Sinensis ID: 025733


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
cHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHcccccEEEEEEEEcccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHcccccccccc
ccHHHHHHHcccEEEEcccccEEccccccccEEEccEEEEEEccccccEEEEEEEcccHHcccccccccccccEEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccccccccccccccccHccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccc
MDMAIaklnsggwvhifpeggrsrdggktvgspkrgvgrlildadnvpmvvpfvhtgmqevmpigatfprigKTVTVLigdpiefddlvDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQeslglqnhllneDYSLAQEALVQSklditptqerSFFRMGLSYGDAFAsrmrgymdptelMGFAArglfmngrtTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
MDMAIAKlnsggwvhifpeggrsrdggktvgspKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKylsrgklydavASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEAnllgkwnllm
MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
*******LNSGGWVHIFP*****************GVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNL**
MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKL*************************************************************************RMRGYMDPTELMGFAARGLFM****************LRAWKQYMEANLLGKWNLL*
MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHL*****************************MGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGR*******VRERGPLRAWKQYMEANLLGKWNLL*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query249 2.2.26 [Sep-21-2011]
Q6IV77262 Tafazzin OS=Macaca mulatt yes no 0.489 0.465 0.352 2e-14
Q6IV78262 Tafazzin OS=Saimiri sciur N/A no 0.489 0.465 0.352 2e-14
Q6IV76262 Tafazzin OS=Erythrocebus N/A no 0.489 0.465 0.352 2e-14
Q6IV83292 Tafazzin OS=Gorilla goril N/A no 0.489 0.417 0.352 3e-14
Q6IV84292 Tafazzin OS=Pan troglodyt yes no 0.489 0.417 0.352 5e-14
Q16635292 Tafazzin OS=Homo sapiens no no 0.489 0.417 0.352 5e-14
Q6IV82292 Tafazzin OS=Pongo pygmaeu N/A no 0.489 0.417 0.344 9e-14
Q9V6G5378 Tafazzin homolog OS=Droso yes no 0.506 0.333 0.263 2e-10
Q54DX7285 Putative lysophosphatidyl yes no 0.522 0.456 0.293 2e-09
Q9ZV87284 N-acylphosphatidylethanol no no 0.341 0.299 0.347 5e-08
>sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1 Back     alignment and function desciption
 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 1   MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQE 60
           MD  + KLN G WVHIFPEG    +        K G+GRLI +    P+++P  H GM +
Sbjct: 132 MDFILEKLNHGDWVHIFPEG--KVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMND 189

Query: 61  VMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKL 119
           V+P     FPR G+ +TVLIG P     +++  + +  S  ++  A+   I    ++LK 
Sbjct: 190 VLPNSPPYFPRFGQKITVLIGKPFSALPILERLRAENKSAVEMRKALTDFIQEEFQRLKT 249

Query: 120 QVDRL 124
           Q ++L
Sbjct: 250 QAEQL 254




Some isoforms may be involved in cardiolipin metabolism.
Macaca mulatta (taxid: 9544)
>sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1 Back     alignment and function description
>sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q16635|TAZ_HUMAN Tafazzin OS=Homo sapiens GN=TAZ PE=1 SV=1 Back     alignment and function description
>sp|Q6IV82|TAZ_PONPY Tafazzin OS=Pongo pygmaeus GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q9V6G5|TAZ_DROME Tafazzin homolog OS=Drosophila melanogaster GN=Taz PE=2 SV=2 Back     alignment and function description
>sp|Q54DX7|TAZ1_DICDI Putative lysophosphatidylcholine acyltransferase OS=Dictyostelium discoideum GN=taz PE=3 SV=1 Back     alignment and function description
>sp|Q9ZV87|NAPES_ARATH N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana GN=At1g78690 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
359487638 459 PREDICTED: uncharacterized protein LOC10 0.987 0.535 0.626 2e-88
147786913 459 hypothetical protein VITISV_026039 [Viti 0.987 0.535 0.619 5e-88
224123600 462 predicted protein [Populus trichocarpa] 0.955 0.515 0.613 7e-84
255542736 461 taz protein, putative [Ricinus communis] 0.971 0.524 0.593 6e-75
449435629 479 PREDICTED: uncharacterized protein LOC10 0.971 0.505 0.555 3e-73
356505825 468 PREDICTED: tafazzin-like [Glycine max] 0.971 0.517 0.541 1e-72
356572982 467 PREDICTED: uncharacterized protein LOC10 0.987 0.526 0.534 2e-71
357511839 463 Tafazzin [Medicago truncatula] gi|355501 0.975 0.524 0.534 3e-69
297829076 461 phospholipid/glycerol acyltransferase fa 0.951 0.514 0.527 3e-67
110736432244 hypothetical protein [Arabidopsis thalia 0.919 0.938 0.518 4e-60
>gi|359487638|ref|XP_002283765.2| PREDICTED: uncharacterized protein LOC100252917 [Vitis vinifera] gi|296089698|emb|CBI39517.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 163/260 (62%), Positives = 202/260 (77%), Gaps = 14/260 (5%)

Query: 1   MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQE 60
           MDMA++KLNSGGWVHIFPEG RSRDGGKT+GS KRGVGRL+LDADN P+VVPFVHTGMQE
Sbjct: 198 MDMAVSKLNSGGWVHIFPEGSRSRDGGKTMGSAKRGVGRLVLDADNTPIVVPFVHTGMQE 257

Query: 61  VMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQ 120
           VMPIGA FPRIG+ VTVLIGDPI FDDL++EEQT+++SRGKLYDAV+SR+  RL++LK+Q
Sbjct: 258 VMPIGANFPRIGQAVTVLIGDPIHFDDLLNEEQTQHMSRGKLYDAVSSRVSRRLQELKVQ 317

Query: 121 VDRLALEQP---------SAECVADILHMVDQESLGLQNHLLNEDYSLAQ-EALVQSKLD 170
           VD+LALE           + E  A ILH VD ES G+ +++ +ED S ++ E     KL+
Sbjct: 318 VDKLALEHSIQLQNHDMQTTEWAAGILHQVDWESFGMGSYITSEDDSSSRLEIQSPMKLN 377

Query: 171 ITPTQERS----FFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRE 226
           +T TQE +    +F MG SY     SR+RGYMDPTELMGFAARGLF+N R  +  A ++E
Sbjct: 378 VTNTQEHAPSERYFGMGFSYEGGIVSRIRGYMDPTELMGFAARGLFLNRRAEEKLASIQE 437

Query: 227 RGPLRAWKQYMEANLLGKWN 246
             PL+AWKQ++EAN+L +WN
Sbjct: 438 IRPLKAWKQFLEANILPQWN 457




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147786913|emb|CAN68895.1| hypothetical protein VITISV_026039 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224123600|ref|XP_002330161.1| predicted protein [Populus trichocarpa] gi|222871617|gb|EEF08748.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542736|ref|XP_002512431.1| taz protein, putative [Ricinus communis] gi|223548392|gb|EEF49883.1| taz protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449435629|ref|XP_004135597.1| PREDICTED: uncharacterized protein LOC101222774 [Cucumis sativus] gi|449517345|ref|XP_004165706.1| PREDICTED: uncharacterized LOC101222774 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356505825|ref|XP_003521690.1| PREDICTED: tafazzin-like [Glycine max] Back     alignment and taxonomy information
>gi|356572982|ref|XP_003554644.1| PREDICTED: uncharacterized protein LOC100817507 [Glycine max] Back     alignment and taxonomy information
>gi|357511839|ref|XP_003626208.1| Tafazzin [Medicago truncatula] gi|355501223|gb|AES82426.1| Tafazzin [Medicago truncatula] Back     alignment and taxonomy information
>gi|297829076|ref|XP_002882420.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328260|gb|EFH58679.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|110736432|dbj|BAF00184.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
TAIR|locus:2079772448 AT3G05510 [Arabidopsis thalian 0.919 0.511 0.522 3.2e-58
RGD|1588532262 Taz "tafazzin" [Rattus norvegi 0.489 0.465 0.352 2e-15
ZFIN|ZDB-GENE-030131-684262 taz "tafazzin" [Danio rerio (t 0.489 0.465 0.344 2e-15
UNIPROTKB|E1BJ23261 TAZ "Uncharacterized protein" 0.489 0.467 0.352 3.3e-15
UNIPROTKB|E2R0P9288 TAZ "Uncharacterized protein" 0.489 0.423 0.352 4.2e-15
UNIPROTKB|J9PBC8290 TAZ "Uncharacterized protein" 0.489 0.420 0.352 4.2e-15
UNIPROTKB|Q16635292 TAZ "Tafazzin" [Homo sapiens ( 0.489 0.417 0.352 9.8e-15
WB|WBGene00006491284 acl-3 [Caenorhabditis elegans 0.493 0.433 0.328 1.5e-10
FB|FBgn0026619378 Taz "Tafazzin" [Drosophila mel 0.506 0.333 0.263 2.8e-10
DICTYBASE|DDB_G0291922285 taz "tafazzin family protein" 0.393 0.343 0.348 7.8e-09
TAIR|locus:2079772 AT3G05510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 128/245 (52%), Positives = 172/245 (70%)

Query:     1 MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQE 60
             MD+AI+KLN+GGWVHIFPEG RSRDGGKT+GS KRG+GRLILDAD +PMVVPFVHTGMQ+
Sbjct:   205 MDIAISKLNNGGWVHIFPEGSRSRDGGKTMGSAKRGIGRLILDADTLPMVVPFVHTGMQD 264

Query:    61 VMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQ 120
             +MP+GA+ PRIGKTVTV+IGDPI F+D++  E  +++SR  LYDAV+SRIG RL  LK Q
Sbjct:   265 IMPVGASVPRIGKTVTVIIGDPIHFNDILSTEGAQHVSRKHLYDAVSSRIGQRLYDLKAQ 324

Query:   121 VDRLALEQPS---------AECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDI 171
             VDR+ +EQ S         ++  A+I H VD +S G+     +E+ S + + + QS   I
Sbjct:   325 VDRVYIEQQSMMSHNAKTPSDRAAEIFHRVDWDSFGMGAQF-SEESSPSSKPIGQSDDRI 383

Query:   172 TPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLR 231
               + +R   R+    G +   +++  MD TE+MGFAARGL MN   + + +    R PL+
Sbjct:   384 VRSPKR---RVSPEGGVSL--KIKKLMDSTEMMGFAARGLLMNEYKSRVESANVGR-PLK 437

Query:   232 AWKQY 236
             AW++Y
Sbjct:   438 AWREY 442




GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
RGD|1588532 Taz "tafazzin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-684 taz "tafazzin" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJ23 TAZ "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R0P9 TAZ "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9PBC8 TAZ "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q16635 TAZ "Tafazzin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00006491 acl-3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0026619 Taz "Tafazzin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291922 taz "tafazzin family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
cd07989184 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr 7e-22
smart00563118 smart00563, PlsC, Phosphate acyltransferases 2e-09
COG0204255 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl 3e-09
pfam01553131 pfam01553, Acyltransferase, Acyltransferase 7e-08
cd07992203 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acy 2e-04
PLN02901214 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate 3e-04
>gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
 Score = 88.9 bits (221), Expect = 7e-22
 Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 1   MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQE 60
           +  AI  L  G  V IFPEG RSRDG   +   K G  RL  +A  VP +VP   +G   
Sbjct: 87  LREAIEALKEGESVVIFPEGTRSRDG--ELLPFKSGAFRLAKEA-GVP-IVPVAISGTWG 142

Query: 61  VMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQT 94
            +P G         VTV IG+PI  + L   E+ 
Sbjct: 143 SLPKGK-KLPRPGRVTVRIGEPIPPEGLELAEED 175


Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. Length = 184

>gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases Back     alignment and domain information
>gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase Back     alignment and domain information
>gnl|CDD|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>gnl|CDD|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 249
KOG2847286 consensus Phosphate acyltransferase [Lipid transpo 99.82
PRK15018245 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr 99.74
PTZ00261355 acyltransferase; Provisional 99.74
KOG2848276 consensus 1-acyl-sn-glycerol-3-phosphate acyltrans 99.67
cd07987212 LPLAT_MGAT-like Lysophospholipid Acyltransferases 99.67
PLN02901214 1-acyl-sn-glycerol-3-phosphate acyltransferase 99.65
cd07992203 LPLAT_AAK14816-like Lysophospholipid Acyltransfera 99.6
cd07986210 LPLAT_ACT14924-like Lysophospholipid Acyltransfera 99.6
PLN02783315 diacylglycerol O-acyltransferase 99.58
cd07983189 LPLAT_DUF374-like Lysophospholipid Acyltransferase 99.49
cd07988163 LPLAT_ABO13168-like Lysophospholipid Acyltransfera 99.43
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 99.42
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.41
cd07985235 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA 99.4
COG0204255 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas 99.37
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.36
cd07991211 LPLAT_LPCAT1-like Lysophospholipid Acyltransferase 99.35
cd06551187 LPLAT Lysophospholipid acyltransferases (LPLATs) o 99.33
cd07993205 LPLAT_DHAPAT-like Lysophospholipid Acyltransferase 99.32
TIGR03703 799 plsB glycerol-3-phosphate O-acyltransferase. Membe 99.22
cd07989184 LPLAT_AGPAT-like Lysophospholipid Acyltransferases 99.22
PRK03355 783 glycerol-3-phosphate acyltransferase; Validated 99.14
PRK04974 818 glycerol-3-phosphate acyltransferase; Validated 99.1
PLN02833376 glycerol acyltransferase family protein 99.1
cd07984192 LPLAT_LABLAT-like Lysophospholipid Acyltransferase 99.08
PLN02177497 glycerol-3-phosphate acyltransferase 98.99
TIGR00530130 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra 98.98
PTZ00374 1108 dihydroxyacetone phosphate acyltransferase; Provis 98.95
smart00563118 PlsC Phosphate acyltransferases. Function in phosp 98.93
PLN02499498 glycerol-3-phosphate acyltransferase 98.9
PF01553132 Acyltransferase: Acyltransferase; InterPro: IPR002 98.89
PRK11915 621 glycerol-3-phosphate acyltransferase; Reviewed 98.75
COG2121214 Uncharacterized protein conserved in bacteria [Fun 98.72
PLN02588525 glycerol-3-phosphate acyltransferase 98.65
PRK14014301 putative acyltransferase; Provisional 98.6
PF03982297 DAGAT: Diacylglycerol acyltransferase ; InterPro: 98.12
PRK08419298 lipid A biosynthesis lauroyl acyltransferase; Revi 98.09
PLN02349426 glycerol-3-phosphate acyltransferase 97.84
PRK07920298 lipid A biosynthesis lauroyl acyltransferase; Prov 97.8
COG2937 810 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid 97.36
PLN02510374 probable 1-acyl-sn-glycerol-3-phosphate acyltransf 97.16
PF03279295 Lip_A_acyltrans: Bacterial lipid A biosynthesis ac 97.06
cd07990193 LPLAT_LCLAT1-like Lysophospholipid Acyltransferase 97.04
PRK06553308 lipid A biosynthesis lauroyl acyltransferase; Prov 97.0
PRK06628290 lipid A biosynthesis lauroyl acyltransferase; Prov 96.97
KOG0831334 consensus Acyl-CoA:diacylglycerol acyltransferase 96.46
PRK05646310 lipid A biosynthesis lauroyl acyltransferase; Prov 96.39
KOG3730 685 consensus Acyl-CoA:dihydroxyactetone-phosphate acy 96.25
PRK06860309 lipid A biosynthesis lauroyl acyltransferase; Prov 96.24
PRK06946293 lipid A biosynthesis lauroyl acyltransferase; Prov 96.23
PRK08943314 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac 96.15
TIGR02207303 lipid_A_htrB lipid A biosynthesis lauroyl (or palm 96.1
PRK08905289 lipid A biosynthesis lauroyl acyltransferase; Vali 95.99
PRK05906454 lipid A biosynthesis lauroyl acyltransferase; Prov 95.9
PLN02380376 1-acyl-sn-glycerol-3-phosphate acyltransferase 95.86
PRK08706289 lipid A biosynthesis lauroyl acyltransferase; Prov 95.77
TIGR02208305 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) 95.75
KOG3729 715 consensus Mitochondrial glycerol-3-phosphate acylt 95.67
PRK08734305 lipid A biosynthesis lauroyl acyltransferase; Prov 95.5
PRK08733306 lipid A biosynthesis lauroyl acyltransferase; Prov 95.39
PRK08025305 lipid A biosynthesis palmitoleoyl acyltransferase; 95.32
COG1560308 HtrB Lauroyl/myristoyl acyltransferase [Cell envel 94.99
PRK15174656 Vi polysaccharide export protein VexE; Provisional 94.69
PRK05645295 lipid A biosynthesis lauroyl acyltransferase; Prov 93.85
KOG4321279 consensus Predicted phosphate acyltransferases [Li 87.22
COG3176292 Putative hemolysin [General function prediction on 85.59
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
Probab=99.82  E-value=8.5e-21  Score=169.24  Aligned_cols=125  Identities=49%  Similarity=0.764  Sum_probs=114.5

Q ss_pred             CHHHHHHHHCCCeEEEEeCCcccCCCCcccCCcChHHHHHHHhcCCCCeEEEEEEecCCccCcCC-CCCCCCCCeEEEEE
Q 025733            1 MDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIG-ATFPRIGKTVTVLI   79 (249)
Q Consensus         1 m~~a~~~Lk~G~~V~IFPEGTrs~~g~~~l~~fk~G~a~LA~~a~~vP~IVPV~I~G~~~~~p~g-~~lpr~g~~V~V~~   79 (249)
                      |+.|++.|+.|.||+|||||.+...+ .+++.||+|+++|+.++...|+|+|+++.|+++++|.. ...|++|++|+|+|
T Consensus       140 md~~i~kLn~g~WVHiFPEGkV~q~~-~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P~~~p~vp~~Gk~vtV~I  218 (286)
T KOG2847|consen  140 MDFAIEKLNDGSWVHIFPEGKVNQME-KEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMPEAPPYVPRFGKTVTVTI  218 (286)
T ss_pred             HHHHHHhcCCCCeEEECCCceeeccc-cchhheeccceeeeecCCCCCEEeehhhhhHHHhCccCCCccCCCCCEEEEEe
Confidence            68999999999999999999999744 47999999999999999877899999999999999998 78899999999999


Q ss_pred             CCcccCCCCcchHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 025733           80 GDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLAL  126 (249)
Q Consensus        80 GePI~~~~l~~~~~~~~~~~re~~~~vt~~I~~~L~~L~~~~e~~~~  126 (249)
                      |+||..++......++..+...+.+.+++.|+++++.|++++++...
T Consensus       219 G~P~~~~d~~~t~l~~~~~~p~~~k~~td~iq~~~qdL~~~~~~~~~  265 (286)
T KOG2847|consen  219 GDPINFDDVEWTVLAEKVSTPKLRKALTDEIQERFQDLREQVERLLR  265 (286)
T ss_pred             CCCcchhHHHHHHHhhccCCchhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999887777777888999999999999999999999877643



>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional Back     alignment and domain information
>PTZ00261 acyltransferase; Provisional Back     alignment and domain information
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like Back     alignment and domain information
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 Back     alignment and domain information
>PLN02783 diacylglycerol O-acyltransferase Back     alignment and domain information
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 Back     alignment and domain information
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT Back     alignment and domain information
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis Back     alignment and domain information
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like Back     alignment and domain information
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase Back     alignment and domain information
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
>PRK03355 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>PRK04974 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>PLN02833 glycerol acyltransferase family protein Back     alignment and domain information
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like Back     alignment and domain information
>PLN02177 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases Back     alignment and domain information
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional Back     alignment and domain information
>smart00563 PlsC Phosphate acyltransferases Back     alignment and domain information
>PLN02499 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] Back     alignment and domain information
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed Back     alignment and domain information
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN02588 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PRK14014 putative acyltransferase; Provisional Back     alignment and domain information
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] Back     alignment and domain information
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed Back     alignment and domain information
>PLN02349 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] Back     alignment and domain information
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria Back     alignment and domain information
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like Back     alignment and domain information
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] Back     alignment and domain information
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] Back     alignment and domain information
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated Back     alignment and domain information
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Back     alignment and domain information
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated Back     alignment and domain information
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase Back     alignment and domain information
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] Back     alignment and domain information
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed Back     alignment and domain information
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism] Back     alignment and domain information
>COG3176 Putative hemolysin [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 38/270 (14%), Positives = 83/270 (30%), Gaps = 82/270 (30%)

Query: 14  VHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGK 73
             +F +   SR   +     ++ +  L   A NV      +  G+     +G+     GK
Sbjct: 123 NQVFAKYNVSR--LQPYLKLRQALLELR-PAKNV-----LID-GV-----LGS-----GK 163

Query: 74  TVTVL--------------------IGDPIEFDDLVDEEQTKYLSRGKLYDAVA---SRI 110
           T   L                    + +    + +++  Q         + + +   S I
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 111 GHRLKKLKLQVDRLALEQPSAECVADILHMV-DQESLGLQNHLLNEDYSLAQEAL-VQSK 168
             R+  ++ ++ RL   +P   C+  +L  V + ++                 A  +  K
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAW---------------NAFNLSCK 267

Query: 169 LDITPTQERS--FFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTD------- 219
           + +T T+ +    F    +            + P E+     +  +++ R  D       
Sbjct: 268 ILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK--YLDCRPQDLPREVLT 324

Query: 220 --------IAAIVRERGPLRAWKQYMEANL 241
                   IA  +R+ G    W  +   N 
Sbjct: 325 TNPRRLSIIAESIRD-GLAT-WDNWKHVNC 352


>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Length = 367 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 99.48
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Back     alignment and structure
Probab=99.48  E-value=8e-14  Score=130.00  Aligned_cols=114  Identities=18%  Similarity=0.263  Sum_probs=82.7

Q ss_pred             CHHHHHHHHC-CCeEEEEeCCcccCC----CCcccCCcChHHH----HHHHhcCCCC-eEEEEEEecCCccCcCC-----
Q 025733            1 MDMAIAKLNS-GGWVHIFPEGGRSRD----GGKTVGSPKRGVG----RLILDADNVP-MVVPFVHTGMQEVMPIG-----   65 (249)
Q Consensus         1 m~~a~~~Lk~-G~~V~IFPEGTrs~~----g~~~l~~fk~G~a----~LA~~a~~vP-~IVPV~I~G~~~~~p~g-----   65 (249)
                      |+++++.|++ |.+|+|||||||+++    |++...+|+.|.+    +||.+++ +| -||||+|.+ .+++|..     
T Consensus       212 l~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg-~P~hIvPvaI~t-~~imppp~~ve~  289 (367)
T 1iuq_A          212 LKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSD-VPGHLFPLALLC-HDIMPPPSQVEI  289 (367)
T ss_dssp             HHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSS-SCEEEEEEEEEC-GGGSCCC-----
T ss_pred             HHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcC-CCceEEEEEEEe-ccccCCcccccc
Confidence            4678899999 559999999999995    5444677999999    9999999 55 389999995 5777653     


Q ss_pred             ----CCCCCCCCeEEEEECCcccCCCCcchHHhhhhchHHHHHHHHHHHHHHHHHHHHHH
Q 025733           66 ----ATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQV  121 (249)
Q Consensus        66 ----~~lpr~g~~V~V~~GePI~~~~l~~~~~~~~~~~re~~~~vt~~I~~~L~~L~~~~  121 (249)
                          ..+.++ .+|.|.||+||+++++.....    +.++..+++++.+++.|.+...++
T Consensus       290 ~~g~~r~i~~-~~V~v~ig~pI~~~~l~~~~e----~~~e~~~~l~e~v~~~I~~~y~~l  344 (367)
T 1iuq_A          290 EIGEKRVIAF-NGAGLSVAPEISFEEIAATHK----NPEEVREAYSKALFDSVAMQYNVL  344 (367)
T ss_dssp             -----CCCCC-BCCEEEECCCCCHHHHHHTSS----SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccceeec-ccEEEEECCccchhhcccccc----chHHHHHHHHHHHHHHHHHHHHHH
Confidence                112333 489999999999987642211    124445567777777776655444




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 249
d1iuqa_367 c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf 6e-10
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
 Score = 56.2 bits (135), Expect = 6e-10
 Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 16/134 (11%)

Query: 1   MDMAIAKLNSGG-WVHIFPEGGRSRDGGKTV-------GSPKRGVGRLILDADNVPM-VV 51
           +      L  G   + I P GGR R    T         +      R ++   +VP  + 
Sbjct: 212 LKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLF 271

Query: 52  PFVHTGMQEVMPIGATFPRIGK-------TVTVLIGDPIEFDDLVDEEQTKYLSRGKLYD 104
           P        + P       IG+          + +   I F+++    +     R     
Sbjct: 272 PLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSK 331

Query: 105 AVASRIGHRLKKLK 118
           A+   +  +   LK
Sbjct: 332 ALFDSVAMQYNVLK 345


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
d1iuqa_367 Glycerol-3-phosphate (1)-acyltransferase {Cushaw s 99.37
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.37  E-value=4.4e-13  Score=123.25  Aligned_cols=110  Identities=18%  Similarity=0.260  Sum_probs=77.4

Q ss_pred             CHHHHHHHHCCC-eEEEEeCCcccC----CCCcccCCcChHH----HHHHHhcCCCCe-EEEEEEecCCccCcCCCC---
Q 025733            1 MDMAIAKLNSGG-WVHIFPEGGRSR----DGGKTVGSPKRGV----GRLILDADNVPM-VVPFVHTGMQEVMPIGAT---   67 (249)
Q Consensus         1 m~~a~~~Lk~G~-~V~IFPEGTrs~----~g~~~l~~fk~G~----a~LA~~a~~vP~-IVPV~I~G~~~~~p~g~~---   67 (249)
                      |+++++.|++|+ +|+|||||||++    +|++...+|++|.    ++||..++ +|+ |+|+++.|++.+.|.+..   
T Consensus       212 l~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sg-vP~hV~Pvai~~~d~~pP~~~v~~~  290 (367)
T d1iuqa_         212 LKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSD-VPGHLFPLALLCHDIMPPPSQVEIE  290 (367)
T ss_dssp             HHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSS-SCEEEEEEEEECGGGSCCC------
T ss_pred             HHHHHHHhhcCCeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCC-CCceEechhhhcccccCCCcccccc
Confidence            467888898884 678999999995    5555566777764    78999999 775 999999998776665432   


Q ss_pred             -----CCCCCCeEEEEECCcccCCCCcchHHhhhhchHHHHHHHHHHHHHHHHH
Q 025733           68 -----FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKK  116 (249)
Q Consensus        68 -----lpr~g~~V~V~~GePI~~~~l~~~~~~~~~~~re~~~~vt~~I~~~L~~  116 (249)
                           .++ +.+|.|.||+||+++++....+    +..+..+..++.|.+.+.+
T Consensus       291 ige~R~~~-~~~V~i~~G~pId~~~~~~~~~----~~~e~~ea~~k~l~d~v~e  339 (367)
T d1iuqa_         291 IGEKRVIA-FNGAGLSVAPEISFEEIAATHK----NPEEVREAYSKALFDSVAM  339 (367)
T ss_dssp             ----CCCC-CBCCEEEECCCCCHHHHHHTSS----SHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccccC-CCceeEEeCCCcchhhhhhhcc----chHHHHHHHHHHHHHHHHH
Confidence                 223 3479999999999987654322    2345555556666555544