Citrus Sinensis ID: 025738

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MSKIRRFFLPCIFPTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPDQEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccEEEEEEEcccccccccEEEEEcccHHHHHHHHHcccEEEEEEEccccccccccccccccccccEEEEEEccEEEEEEEcccccHHHHHHHHHccEEEEEEEEEccccccccccccccEEEEEEcccEEEccccccEEEEEccccccccEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHEEccccccccccEEEEEEEcccccEEEEEEEccccccccEEEEEcccHHHHHHHHHHcccEEEEEEEccccccccccccccccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHccEEEcccEcccccccccccccccEEEEEEEEEEEEccccccEEEEEcccccccccEEEEEEEcc
Coil and Loop (DISEMBL)
mskirrfflpcifptaadaqttpapkkrlstslrddideptntksaaadqeaqnpdqeptspednsttllivpprpsksmvigtifghrrGHVWFCIQqdrvsmkptlllelsmptnQLVKEMRCGLVRIALecarpesterievtscplrlvPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIgagvipaglgssgpdsgEQIIYMRANYehmigsadsesfhlinpdecagqEFSLFLLRSM
Flexible Loop (DISEMBL)
mskirrfflpcifptaadaqttpapkkrlstslrddideptntksaaadqeaqnpdqeptspednsttllivpprpsKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALEcarpesterievtscplrlvPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Low Complexity Region (SEG)
MSKIRRFFLPCIFptaadaqttpapKKRLSTSLRDDIDEPTNTKSAAADQEAQNPDQEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Disordered region (IsUnstruct)
****RRFFLPCIFPT***************************************************************SMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGL********EQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLL***
Disordered Region (DISOPRED)
**KIRRFFLPC*******************************************************************SMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIAL*********************PVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLG****DSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Disordered Region (DISEMBL)
MSKIRRFFLPCIFPTAAD***********STSLRDDIDEPT************************STTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Disordered Region (DISPRO)
MSKIRRFFLPCIFPT************************************************DNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPE********SCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSS***SGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKIRRFFLPCIFPTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPDQEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRSM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
225440506	239	PREDICTED: uncharacterized protein LOC10	0.931	0.970	0.605	8e-77
449448864	248	PREDICTED: uncharacterized protein LOC10	0.947	0.951	0.566	2e-73
449523003	248	PREDICTED: uncharacterized protein LOC10	0.947	0.951	0.570	3e-73
255577975	250	conserved hypothetical protein [Ricinus	0.939	0.936	0.558	7e-73
18404579	247	uncharacterized protein [Arabidopsis tha	0.943	0.951	0.568	3e-72
116831145	248	unknown [Arabidopsis thaliana]	0.943	0.947	0.568	4e-72
21593000	247	unknown [Arabidopsis thaliana]	0.943	0.951	0.568	7e-72
297823661	248	hypothetical protein ARALYDRAFT_482794 [	0.947	0.951	0.568	2e-66
224087529	161	predicted protein [Populus trichocarpa]	0.646	1.0	0.704	1e-62
356523209	228	PREDICTED: uncharacterized protein LOC10	0.883	0.964	0.512	2e-56

>gi|225440506|ref|XP_002272579.1| PREDICTED: uncharacterized protein LOC100254612 [Vitis vinifera]

 Score =  292 bits (748), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 152/251 (60%), Positives = 184/251 (73%), Gaps = 19/251 (7%)

Query: 1   MSKIRRFFLPCIFPTAADAQTTPAP--KKRLSTSLRDDIDEPTNTKSAAADQEAQNPDQE 58
           +  +RR  LPC   T   + TT     KKRLSTSLRDDI E     +   D+++   D+ 
Sbjct: 4   IDALRRCILPCFSATTTVSSTTTIATTKKRLSTSLRDDIQEDHLQDNPENDEDSTTTDES 63

Query: 59  -PTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTN 117
            PT P          P RPSK+MVIGTIFGHRRGHVWFC+Q DR++ KP+LLLELS+PT+
Sbjct: 64  IPTHPHQ-------APARPSKTMVIGTIFGHRRGHVWFCVQHDRLNTKPSLLLELSIPTH 116

Query: 118 QLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQN 177
           QLVKEMRCGLVRIALEC      +R +++SCPL  VPVW MYCNGRK+GFA+RRK +  N
Sbjct: 117 QLVKEMRCGLVRIALEC------DRSDLSSCPLHSVPVWTMYCNGRKLGFAIRRKPTENN 170

Query: 178 RLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECA 237
           R+MLK MQS+T+GAGVIPAGLGS G   GE ++YMRANYE ++GS DSESFHLINPD+C 
Sbjct: 171 RVMLKTMQSMTVGAGVIPAGLGSDG--DGE-LMYMRANYECVVGSCDSESFHLINPDDCP 227

Query: 238 GQEFSLFLLRS 248
           GQE S+FLLR+
Sbjct: 228 GQELSVFLLRT 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448864|ref|XP_004142185.1| PREDICTED: uncharacterized protein LOC101221385 [Cucumis sativus]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/254 (56%), Positives = 176/254 (69%), Gaps = 18/254 (7%)

Query: 1   MSKIRRFFLPCIFPTAADAQTTPAP--KKRLSTSLRDDIDEPTNT----KSAAADQEAQN 54
           +  +RRF LPC FP  A      +   KKRLSTSLRDD++  T T     +   D  A  
Sbjct: 4   IDALRRFLLPCFFPPTAAPAAASSAVPKKRLSTSLRDDLETTTATLNEDPTHGQDSPATT 63

Query: 55  PDQEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSM 114
           PD    +P+   +  ++ PPRPSK+MVIGTIFGHRRGHVWFC+Q DR+  KP LLLE  +
Sbjct: 64  PDS--VTPKFAVSASIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPI 121

Query: 115 PTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKAS 174
            T+QLV EMR GLVRIALEC       R+E+  CPLR +P+W M CNGRK+GFA ++KA 
Sbjct: 122 LTHQLVNEMRFGLVRIALEC------NRVELGFCPLRSIPIWAMSCNGRKLGFAAKKKAG 175

Query: 175 GQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPD 234
              R MLK MQS T+GAGV+P+G GS      E+++YMRANYEH++GSADSESFHLINPD
Sbjct: 176 EPVRSMLKTMQSTTVGAGVMPSGFGS----GSEEVMYMRANYEHVVGSADSESFHLINPD 231

Query: 235 ECAGQEFSLFLLRS 248
           EC GQE S+FLLRS
Sbjct: 232 ECPGQELSIFLLRS 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449523003|ref|XP_004168514.1| PREDICTED: uncharacterized protein LOC101224274 [Cucumis sativus]

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 145/254 (57%), Positives = 176/254 (69%), Gaps = 18/254 (7%)

Query: 1   MSKIRRFFLPCIFPTAADAQTTP--APKKRLSTSLRDDIDEPTNT----KSAAADQEAQN 54
           +  +RRF LPC FP  A         PKKRLSTSLRDD++  T T     +   D  A  
Sbjct: 4   IDALRRFLLPCFFPPTAATAAASSAVPKKRLSTSLRDDLETTTATLNEDPTHGQDSPATT 63

Query: 55  PDQEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSM 114
           PD    +P+   +  ++ PPRPSK+MVIGTIFGHRRGHVWFC+Q DR+  KP LLLE  +
Sbjct: 64  PDS--VTPKFAVSASIVAPPRPSKTMVIGTIFGHRRGHVWFCVQHDRLRNKPFLLLEFPI 121

Query: 115 PTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKAS 174
            T+QLV EMR GLVRIALEC       R+E+  CPLR +P+W M CNGRK+GFA ++KA 
Sbjct: 122 LTHQLVNEMRFGLVRIALEC------NRVELGFCPLRSIPIWAMSCNGRKLGFAAKKKAG 175

Query: 175 GQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPD 234
              R MLK MQS T+GAGV+P+G GS      E+++YMRANYEH++GSADSESFHLINPD
Sbjct: 176 EPVRSMLKTMQSTTVGAGVMPSGFGS----GSEEVMYMRANYEHVVGSADSESFHLINPD 231

Query: 235 ECAGQEFSLFLLRS 248
           EC GQE S+FLLRS
Sbjct: 232 ECPGQELSIFLLRS 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577975|ref|XP_002529859.1| conserved hypothetical protein [Ricinus communis] gi|223530635|gb|EEF32509.1| conserved hypothetical protein [Ricinus communis]

 Score =  279 bits (714), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 144/258 (55%), Positives = 184/258 (71%), Gaps = 24/258 (9%)

Query: 1   MSKI---RRFFLPCIFPTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPDQ 57
           M+KI   RR+ LPC  P           KKR+STSLRDD+  PT       +QE QN + 
Sbjct: 1   MTKIDALRRYLLPCFSPPTTSTTHHHTAKKRISTSLRDDLLGPT------VNQECQNQEN 54

Query: 58  EPTSPEDNSTTLLIVPP------RPSKSMVIGTIFGHRRGH-VWFCIQQDRVSMKPTLLL 110
           + ++   ++ + +          RPSK+MV+GTIFG+RRG+ VWFCIQ DR S K   LL
Sbjct: 55  QDSTSSSSAESRITATTTALAPARPSKTMVVGTIFGNRRGNKVWFCIQFDRFSTKSLFLL 114

Query: 111 ELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVR 170
           EL++PT QLVKEM+CGLVRIALECARPE        SCPLR +PVW MYCNG++ GF+++
Sbjct: 115 ELNIPTPQLVKEMQCGLVRIALECARPE------FNSCPLRSIPVWTMYCNGKRTGFSLK 168

Query: 171 RKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHL 230
           RKA+ QNRLMLK MQS+T+GAGVIPAG GS G  + E+I+YMRANYEH++G+A++ESFHL
Sbjct: 169 RKATDQNRLMLKTMQSMTVGAGVIPAGFGSLG--NTEEIMYMRANYEHVVGNANTESFHL 226

Query: 231 INPDECAGQEFSLFLLRS 248
           IN DEC GQE S+FL+R+
Sbjct: 227 INLDECVGQELSVFLMRT 244

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404579|ref|NP_565873.1| uncharacterized protein [Arabidopsis thaliana] gi|91806329|gb|ABE65892.1| unknown [Arabidopsis thaliana] gi|330254367|gb|AEC09461.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 145/255 (56%), Positives = 183/255 (71%), Gaps = 20/255 (7%)

Query: 1   MSKIRRFFLPCIF----PTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPD 56
           +  +RRF LPCI     PT     +T A KKRLSTSLRDDID   +  S+A+  EA    
Sbjct: 4   IDSLRRFLLPCISTPTNPTTVSTTSTGASKKRLSTSLRDDIDVQDSASSSASSSEAT--- 60

Query: 57  QEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPT 116
               S  D S + + VP RPSK+MVIGTIFG R+GHVWFC+Q DR+S+KP LLLELS+ T
Sbjct: 61  ----SAVDYSISAVTVPQRPSKTMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIAT 116

Query: 117 NQLVKEMRCGLVRIALEC-ARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASG 175
           +QLV EM  GLVR+ALEC  RP      E+ SC LR VPVW M+CNGRK+GFAVRR A+ 
Sbjct: 117 SQLVHEMGSGLVRVALECPTRP------ELKSCLLRSVPVWTMFCNGRKLGFAVRRSANE 170

Query: 176 QNRLMLKMMQSITIGAGVIPAGLGSSGPDSG--EQIIYMRANYEHMIGSADSESFHLINP 233
           + R+MLK ++S+T+GAGV+P+G G  G D    ++++YMRANYEH++GS+DSESFHLINP
Sbjct: 171 ETRMMLKRLESMTVGAGVLPSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINP 230

Query: 234 DECAGQEFSLFLLRS 248
           D  + QE S+FLLR+
Sbjct: 231 DANSAQELSIFLLRT 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831145|gb|ABK28527.1| unknown [Arabidopsis thaliana]

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 145/255 (56%), Positives = 183/255 (71%), Gaps = 20/255 (7%)

Query: 1   MSKIRRFFLPCIF----PTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPD 56
           +  +RRF LPCI     PT     +T A KKRLSTSLRDDID   +  S+A+  EA    
Sbjct: 4   IDSLRRFLLPCISTPTNPTTVSTTSTGASKKRLSTSLRDDIDVQDSASSSASSSEAT--- 60

Query: 57  QEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPT 116
               S  D S + + VP RPSK+MVIGTIFG R+GHVWFC+Q DR+S+KP LLLELS+ T
Sbjct: 61  ----SAVDYSISAVTVPQRPSKTMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIAT 116

Query: 117 NQLVKEMRCGLVRIALEC-ARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASG 175
           +QLV EM  GLVR+ALEC  RP      E+ SC LR VPVW M+CNGRK+GFAVRR A+ 
Sbjct: 117 SQLVHEMGSGLVRVALECPTRP------ELKSCLLRSVPVWTMFCNGRKLGFAVRRSANE 170

Query: 176 QNRLMLKMMQSITIGAGVIPAGLGSSGPDSG--EQIIYMRANYEHMIGSADSESFHLINP 233
           + R+MLK ++S+T+GAGV+P+G G  G D    ++++YMRANYEH++GS+DSESFHLINP
Sbjct: 171 ETRMMLKRLESMTVGAGVLPSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINP 230

Query: 234 DECAGQEFSLFLLRS 248
           D  + QE S+FLLR+
Sbjct: 231 DANSAQELSIFLLRT 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593000|gb|AAM64949.1| unknown [Arabidopsis thaliana]

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 145/255 (56%), Positives = 182/255 (71%), Gaps = 20/255 (7%)

Query: 1   MSKIRRFFLPCIF----PTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPD 56
           +  +RRF LPCI     PT     +T A KKRLSTSLRDDID   +  S+A+  EA    
Sbjct: 4   IDSLRRFLLPCISTPTNPTTVSTTSTGASKKRLSTSLRDDIDVQDSASSSASSSEAT--- 60

Query: 57  QEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPT 116
               S  D S + + VP RPSK MVIGTIFG R+GHVWFC+Q DR+S+KP LLLELS+ T
Sbjct: 61  ----SAVDYSISAVTVPQRPSKXMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIAT 116

Query: 117 NQLVKEMRCGLVRIALEC-ARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASG 175
           +QLV EM  GLVR+ALEC  RP      E+ SC LR VPVW M+CNGRK+GFAVRR A+ 
Sbjct: 117 SQLVHEMGSGLVRVALECPTRP------ELKSCLLRSVPVWTMFCNGRKLGFAVRRSANE 170

Query: 176 QNRLMLKMMQSITIGAGVIPAGLGSSGPDSG--EQIIYMRANYEHMIGSADSESFHLINP 233
           + R+MLK ++S+T+GAGV+P+G G  G D    ++++YMRANYEH++GS+DSESFHLINP
Sbjct: 171 ETRMMLKRLESMTVGAGVLPSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINP 230

Query: 234 DECAGQEFSLFLLRS 248
           D  + QE S+FLLR+
Sbjct: 231 DANSAQELSIFLLRT 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823661|ref|XP_002879713.1| hypothetical protein ARALYDRAFT_482794 [Arabidopsis lyrata subsp. lyrata] gi|297325552|gb|EFH55972.1| hypothetical protein ARALYDRAFT_482794 [Arabidopsis lyrata subsp. lyrata]

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/255 (56%), Positives = 185/255 (72%), Gaps = 19/255 (7%)

Query: 1   MSKIRRFFLPCIFP----TAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPD 56
           +  +RRF LPCI P    T     +T A KKRLSTSLRDDID   +  S+A+  EA    
Sbjct: 4   IDSLRRFLLPCITPPTNSTTVSTTSTGASKKRLSTSLRDDIDVQDSASSSASSSEAT--- 60

Query: 57  QEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPT 116
              ++  D + + + VP RPSK+MVIGTIFG R+GHVWFC+Q DR+S+KP LLLELS+ T
Sbjct: 61  ---SAAADYNLSAVTVPQRPSKTMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIAT 117

Query: 117 NQLVKEMRCGLVRIALEC-ARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASG 175
           +QLV EM  GLVR+ALEC  RP      E+ SC LR VPVW M+CNGRK+GFAVRR A+ 
Sbjct: 118 SQLVHEMGSGLVRVALECPTRP------ELKSCLLRSVPVWTMFCNGRKLGFAVRRSANE 171

Query: 176 QNRLMLKMMQSITIGAGVIP--AGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINP 233
           + RLMLK ++S+T+GAGV+P  +GLG SG    ++++YMRANYEH++GS+DSESFHLINP
Sbjct: 172 ETRLMLKRLESMTVGAGVLPSGSGLGGSGESDTDEVMYMRANYEHVVGSSDSESFHLINP 231

Query: 234 DECAGQEFSLFLLRS 248
           D  + QE S+FLLR+
Sbjct: 232 DANSAQELSIFLLRT 246

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087529|ref|XP_002308185.1| predicted protein [Populus trichocarpa] gi|222854161|gb|EEE91708.1| predicted protein [Populus trichocarpa]

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 119/169 (70%), Positives = 137/169 (81%), Gaps = 8/169 (4%)

Query: 80  MVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPES 139
           MVI TIFG+RRGHVWFCIQ DR+S  P LLLELS+PT+QLVKEM+CGLVR+ALEC R   
Sbjct: 1   MVISTIFGNRRGHVWFCIQHDRLSTIPLLLLELSIPTHQLVKEMQCGLVRLALECNRS-- 58

Query: 140 TERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLG 199
               E+ S PLR VPVW + CNG+K GFA+RRKAS Q RLMLK +QS+T+ AGVIPA LG
Sbjct: 59  ----ELNSVPLRAVPVWTVNCNGKKAGFALRRKASEQIRLMLKTVQSMTVAAGVIPARLG 114

Query: 200 SSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRS 248
           SS     E+I+YMRANYEHM+G ADSESFHLINPDEC GQE S+FL+RS
Sbjct: 115 SS--SDSEEIMYMRANYEHMVGRADSESFHLINPDECPGQELSVFLMRS 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523209|ref|XP_003530234.1| PREDICTED: uncharacterized protein LOC100783029 [Glycine max]

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/248 (51%), Positives = 164/248 (66%), Gaps = 28/248 (11%)

Query: 1   MSKIRRFFLPCIFPTAADAQTTPAPKKRLSTSLRDDIDEPTNTKSAAADQEAQNPDQEPT 60
           +  +RRFFLPC FP+       P P    +    D    PT  + ++      +      
Sbjct: 3   IGTLRRFFLPCFFPS------KPQP----TVPFSDHHHPPTKNRPSSPASSTSS------ 46

Query: 61  SPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLV 120
                ST     PPRPSKSMVIGTIFG+RRGHVWFCIQ DR+S KP+LLLEL + T+ LV
Sbjct: 47  -----STAASAAPPRPSKSMVIGTIFGNRRGHVWFCIQHDRLSSKPSLLLELPLSTDHLV 101

Query: 121 KEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLM 180
           +EMR G+VRIALEC+           +CPLR VP+W  +CNG+K GFA RR+A  + R +
Sbjct: 102 REMRNGIVRIALECS-------AAANACPLRSVPLWTAFCNGKKTGFAARRRAGDRVRNI 154

Query: 181 LKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQE 240
           L+ MQ +++GAGVIP+G  SS   + E+++YMRAN+EH++G+ADSESFHLINPDEC GQE
Sbjct: 155 LRTMQCVSVGAGVIPSGFASSAAAASEELMYMRANFEHVVGNADSESFHLINPDECPGQE 214

Query: 241 FSLFLLRS 248
            S+FLLRS
Sbjct: 215 LSVFLLRS 222

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
TAIR|locus:2065609	247	AT2G37880 "AT2G37880" [Arabido	0.947	0.955	0.559	3.5e-68
TAIR|locus:2199577	245	AT1G21050 "AT1G21050" [Arabido	0.759	0.771	0.47	2.6e-40
TAIR|locus:2178312	277	AT5G23100 "AT5G23100" [Arabido	0.437	0.393	0.403	2.7e-36
TAIR|locus:2011766	226	AT1G76610 "AT1G76610" [Arabido	0.678	0.747	0.458	2.4e-35
TAIR|locus:2062647	297	MIZ1 "AT2G41660" [Arabidopsis	0.722	0.606	0.440	1.5e-33
TAIR|locus:2168257	253	AT5G65340 "AT5G65340" [Arabido	0.682	0.671	0.425	2e-31
TAIR|locus:2169454	261	AT5G06990 "AT5G06990" [Arabido	0.642	0.613	0.394	2.6e-31
TAIR|locus:2102360	267	AT3G25640 "AT3G25640" [Arabido	0.642	0.599	0.420	4.2e-31
TAIR|locus:2122546	264	AT4G39610 "AT4G39610" [Arabido	0.686	0.647	0.389	2.3e-30
TAIR|locus:2052541	252	AT2G21990 "AT2G21990" [Arabido	0.654	0.646	0.391	3.4e-29

TAIR|locus:2065609 AT2G37880 "AT2G37880" [Arabidopsis thaliana (taxid:3702)]

 Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
 Identities = 142/254 (55%), Positives = 179/254 (70%)

Query:     1 MSKIRRFFLPCIFX----XXXXXXXXXXXKKRLSTSLRDDIDEPTNTKSAAADQEAQNPD 56
             +  +RRF LPCI                 KKRLSTSLRDDID   +  S+A+  EA    
Sbjct:     4 IDSLRRFLLPCISTPTNPTTVSTTSTGASKKRLSTSLRDDIDVQDSASSSASSSEA---- 59

Query:    57 QEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPT 116
                TS  D S + + VP RPSK+MVIGTIFG R+GHVWFC+Q DR+S+KP LLLELS+ T
Sbjct:    60 ---TSAVDYSISAVTVPQRPSKTMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIAT 116

Query:   117 NQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQ 176
             +QLV EM  GLVR+ALEC  P    R E+ SC LR VPVW M+CNGRK+GFAVRR A+ +
Sbjct:   117 SQLVHEMGSGLVRVALEC--PT---RPELKSCLLRSVPVWTMFCNGRKLGFAVRRSANEE 171

Query:   177 NRLMLKMMQSITIGAGVIPAGLGSSGPDSGE--QIIYMRANYEHMIGSADSESFHLINPD 234
              R+MLK ++S+T+GAGV+P+G G  G D  +  +++YMRANYEH++GS+DSESFHLINPD
Sbjct:   172 TRMMLKRLESMTVGAGVLPSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINPD 231

Query:   235 ECAGQEFSLFLLRS 248
               + QE S+FLLR+
Sbjct:   232 ANSAQELSIFLLRT 245

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199577 AT1G21050 "AT1G21050" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 94/200 (47%), Positives = 127/200 (63%)

Query:    50 QEAQNPDQEPTSPEDNSTTLLIVPPRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLL 109
             Q  QN     +S   +S++        S S V GT FGHRRG V FC+Q   V   P LL
Sbjct:    56 QPYQNDTLSVSSTSSSSSSSDHSSSSQSSSTVSGTFFGHRRGRVSFCLQDAAVGSSPLLL 115

Query:   110 LELSMPTNQLVKEM-RCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFA 168
             LEL++PT  L KEM   G++RIALEC R  S+      S  +  VPVW M+CNGRK+GFA
Sbjct:   116 LELAVPTAALAKEMDEEGVLRIALECDRRRSSNS---RSSSIFDVPVWSMFCNGRKMGFA 172

Query:   169 VRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESF 228
             VRRK +  + + L+MMQS+++GAGV+P+       +  +Q++Y+RA +E + GS+DSESF
Sbjct:   173 VRRKVTENDAVFLRMMQSVSVGAGVVPS-------EEEDQMLYLRARFERVTGSSDSESF 225

Query:   229 HLINPDECAGQEFSLFLLRS 248
             H++NP    GQE S+FLLRS
Sbjct:   226 HMMNPGGSYGQELSIFLLRS 245

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2178312 AT5G23100 "AT5G23100" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 46/114 (40%), Positives = 73/114 (64%)

Query:   138 ESTERIEVTSCPLRLV--PVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIP 195
             + T+     +   RLV  P+W  YCNG+K GFA RR+   + + +LK ++ +++GAGV+P
Sbjct:   164 DKTKTTTTAAVSRRLVEEPMWRTYCNGKKCGFATRRECGEKEKKVLKALEMVSMGAGVLP 223

Query:   196 AG--LGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLR 247
                 +G  G   G+ I+YMRA +E ++GS DSE+F+++NPD     E S++LLR
Sbjct:   224 ETEEIGGGGGGGGD-IMYMRAKFERIVGSRDSEAFYMMNPDSNGAPELSIYLLR 276

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2011766 AT1G76610 "AT1G76610" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 88/192 (45%), Positives = 118/192 (61%)

Query:    62 PEDNSTTLLIVPPRPSKS----MVIGTIFGHRRGHVWFCIQQD-RVSMKPTLLLELSMPT 116
             P D + T+ +     S      +V GT +GHRRGHV FC+Q D R S  P LLLEL++PT
Sbjct:    53 PTDQNDTVSVSSSTSSSDQTGVVVTGTFYGHRRGHVSFCLQDDTRPSSPPLLLLELAVPT 112

Query:   117 NQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQ 176
               L +EM  G +RIAL   R +S  R  + +     VPVW MYCNGRK GFAVRR+ +  
Sbjct:   113 AALAREMEEGFLRIAL---RSKSNRRSSIFN-----VPVWSMYCNGRKFGFAVRRETTEN 164

Query:   177 NRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDEC 236
             +   L++MQS+++GAGVIP G          + +Y+RA +E + GS+DSESFH++N    
Sbjct:   165 DVGFLRLMQSVSVGAGVIPNG----------ETLYLRAKFERVTGSSDSESFHMVNQGGG 214

Query:   237 AGQEFSLFLLRS 248
              GQE S+FL RS
Sbjct:   215 YGQELSIFLSRS 226

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2062647 MIZ1 "AT2G41660" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 89/202 (44%), Positives = 123/202 (60%)

Query:    59 PTSPEDNSTTLLIVPPRPSKSM---VIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMP 115
             P+S    S  L+ +    S S+   V GT++GH+RGHV F +Q ++ S  P LLL+L+M 
Sbjct:   104 PSSSSSVSNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQRS-DPVLLLDLAMS 162

Query:   116 TNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRR--KA 173
             T  LVKEM  GLVRIALEC   E   R   +   L   P W MYCNGRK G+AV R    
Sbjct:   163 TATLVKEMSSGLVRIALEC---EKRHR---SGTKLFQEPKWTMYCNGRKCGYAVSRGGAC 216

Query:   174 SGQNRLMLKMMQSITIGAGVIP--------AGLGSSGPDSGEQIIYMRANYEHMIGSADS 225
             +  +  +L  +  +T+GAGVIP        +G+GS G + GE ++YMR  +E ++GS DS
Sbjct:   217 TDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGVGS-GTELGE-LLYMRGKFERVVGSRDS 274

Query:   226 ESFHLINPDECAGQEFSLFLLR 247
             E+F+++NPD+  G E S+FLLR
Sbjct:   275 EAFYMMNPDKNGGPELSIFLLR 296

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0032541 "cortical endoplasmic reticulum" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

TAIR|locus:2168257 AT5G65340 "AT5G65340" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 74/174 (42%), Positives = 108/174 (62%)

Query:    77 SKSMVIGTIFGHRRGHVWFCIQQ-DRVSMKPTL-LLELSMPTNQLVKEMRCGLVRIALEC 134
             + S   GTIFG RRG V FCIQ  +  ++ P + LLEL++PT  L +EM+ G++RIALE 
Sbjct:    79 TNSTFTGTIFGFRRGKVNFCIQATNSKTLNPIIVLLELTVPTEVLAREMQGGVLRIALES 138

Query:   135 ARPESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVI 194
                +  +  E +S  L   P+W MYCNGRKVGFA++R+ S      LK++  +  GAGV+
Sbjct:   139 NNNDGYDSHEDSSSSLLTTPLWNMYCNGRKVGFAIKREPSKSELAALKVLTPVAEGAGVV 198

Query:   195 PAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRS 248
                      +  + ++Y+RA+++ + GS DSESFHL++P    GQE S+F  RS
Sbjct:   199 NGE--EINREKSDHMMYLRASFKRVFGSFDSESFHLVDPRGIIGQELSIFFSRS 250

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2169454 AT5G06990 "AT5G06990" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 69/175 (39%), Positives = 119/175 (68%)

Query:    81 VIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPEST 140
             V GT+FG+R+  V   +Q++  S+ P LLLEL++PT +L++++  GLVRIALEC +  S 
Sbjct:    93 VTGTLFGYRKTRVNLAVQENPRSL-PILLLELAIPTGKLLQDLGVGLVRIALECEKKPS- 150

Query:   141 ERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLG- 199
             E+ ++        P+W +YCNG+K G+ V+R+ + ++ ++++M+ ++++GAGV+P   G 
Sbjct:   151 EKTKIID-----EPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLHAVSMGAGVLPVSSGA 205

Query:   200 ----SSGPDSGEQ---IIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLR 247
                 S G   G+Q   + YMRA++E +IGS DSE+++++NPD  +G E S+F +R
Sbjct:   206 ITEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNSGPELSIFFVR 260

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2102360 AT3G25640 "AT3G25640" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 74/176 (42%), Positives = 111/176 (63%)

Query:    81 VIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPEST 140
             V+GT+FG+RRGHV+F +Q D   + P +L++L  PT+ LV+EM  GLVRIALE A  ++ 
Sbjct:    98 VVGTLFGNRRGHVYFAVQDDPTRL-PAVLIQLPTPTSVLVREMASGLVRIALETAAYKTD 156

Query:   141 ERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPA---- 196
              + ++          W  YCNG+K G+A R++       +LK +  IT+GAGV+PA    
Sbjct:   157 SKKKLLE-----ESTWRTYCNGKKCGYAARKECGEAEWKVLKAVGPITMGAGVLPATTTT 211

Query:   197 ----GLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPD-ECAGQEFSLFLLR 247
                 G G+ G + GE ++YMRA +E ++GS DSE+F+++NPD    G E S++ LR
Sbjct:   212 VDEEGNGAVGSEKGE-LMYMRARFERVVGSRDSEAFYMMNPDVSSGGPELSVYFLR 266

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2122546 AT4G39610 "AT4G39610" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 69/177 (38%), Positives = 114/177 (64%)

Query:    74 PRPSKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALE 133
             P  + S + GT+FG+R+G V   IQ++   + P+L++EL+M T  L KE+  G+VRIALE
Sbjct:    90 PHHNTSRITGTLFGYRKGRVSLSIQENPKCL-PSLVVELAMQTTTLQKELSTGMVRIALE 148

Query:   134 CAR-PESTERIEVTSCPLRLV--PVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIG 190
               + P +      T     ++  P+W MYC G K G+ V+R+A+ ++  ++++++ +++G
Sbjct:   149 TEKQPRADNNNSKTEKKTDILEEPLWTMYCKGEKTGYGVKREATEEDLNVMELLRPVSMG 208

Query:   191 AGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLR 247
             AGV+P    S GPD GE + YMRA +E +IGS DSE+F++++P+   G E S F +R
Sbjct:   209 AGVLPGNSESEGPD-GE-MAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVR 263

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2052541 AT2G21990 "AT2G21990" [Arabidopsis thaliana (taxid:3702)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 67/171 (39%), Positives = 112/171 (65%)

Query:    77 SKSMVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECAR 136
             S S V GT+FG+R+G V   IQ+    + P+L++EL+M T  L KE+  G+VRIALE  +
Sbjct:    89 SGSRVTGTLFGYRKGRVSLSIQESPRCL-PSLVVELAMQTMVLQKELSGGMVRIALETEK 147

Query:   137 PESTERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPA 196
                 E+I++   PL     W M+ NG+K G+ V+R A+ ++  ++++++ +++GAGV+P 
Sbjct:   148 RGDKEKIKIMDEPL-----WTMFSNGKKTGYGVKRDATEEDLNVMELLRPVSMGAGVLPG 202

Query:   197 GLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLR 247
                  GPDS  ++ YMRA +E ++GS DSE+F++++P+   G E S+F +R
Sbjct:   203 NTEFEGPDS--EMAYMRAYFERVVGSKDSETFYMLSPEGNNGPELSIFFVR 251

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	249
pfam04759	166	pfam04759, DUF617, Protein of unknown function, DU	1e-76
TIGR01570	161	TIGR01570, A_thal_3588, uncharacterized plant-spec	4e-72

>gnl|CDD|218249 pfam04759, DUF617, Protein of unknown function, DUF617

 Score =  229 bits (585), Expect = 1e-76
 Identities = 85/169 (50%), Positives = 114/169 (67%), Gaps = 3/169 (1%)

Query: 80  MVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPES 139
            V GT+FGHRRG V   IQ+D  S  P LLLEL++PT+ LV+EM  GLVRIALEC +   
Sbjct: 1   RVTGTLFGHRRGRVTLAIQEDPRSP-PALLLELAVPTSALVREMASGLVRIALECEK-RP 58

Query: 140 TERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLG 199
               +     L   PVW MYCNGRKVG+AVRR+A+  +  +L++++ +++GAGV+P   G
Sbjct: 59  GSGGKAAGASLLEEPVWTMYCNGRKVGYAVRREATEDDLRVLELLRPVSMGAGVLPGAGG 118

Query: 200 SSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRS 248
             G   GE ++YMRA +E ++GS DSESF++INPD   G E S+F LR 
Sbjct: 119 GGGGGDGE-VMYMRARFERVVGSRDSESFYMINPDGNGGPELSIFFLRV 166

This family represents a conserved region in a number of uncharacterized plant proteins. Length = 166

>gnl|CDD|233472 TIGR01570, A_thal_3588, uncharacterized plant-specific domain TIGR01570

 Score =  217 bits (554), Expect = 4e-72
 Identities = 90/168 (53%), Positives = 117/168 (69%), Gaps = 7/168 (4%)

Query: 81  VIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPEST 140
           V GTIFG+R+G V FCIQ+DR S+ P LLLEL+MPT+ L KEM  GLVRIALEC      
Sbjct: 1   VTGTIFGYRKGRVNFCIQEDRRSL-PILLLELAMPTSVLQKEMSSGLVRIALECET---- 55

Query: 141 ERIEVTSCPLRLVPVWIMYCNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGS 200
            R +     L   PVW MYCNGRKVG+AV+R AS ++  +L  +  +++GAGV+P G   
Sbjct: 56  -RKQDKDSKLLSEPVWTMYCNGRKVGYAVKRSASEEDMTVLTALSKVSVGAGVLPCGKEL 114

Query: 201 SGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQEFSLFLLRS 248
            G D  E ++YMRA++E ++GS DSESF++INP+   GQE S+F LRS
Sbjct: 115 GGFDEDE-LMYMRASFERVVGSKDSESFYMINPEGNIGQELSIFFLRS 161

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana. Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
PF04759	166	DUF617: Protein of unknown function, DUF617; Inter	100.0
TIGR01570	161	A_thal_3588 uncharacterized plant-specific domain	100.0

>PF04759 DUF617: Protein of unknown function, DUF617; InterPro: IPR006460 This family of hypothetical plant proteins are defined by a region of about 170 amino acids found at the C terminus

Probab=100.00  E-value=2.2e-96  Score=625.41  Aligned_cols=166  Identities=51%  Similarity=0.915  Sum_probs=153.0

Q ss_pred             eEEeeEeeeCCCceeeEEecCCCCCCCeeEEeecCchhHHHHHhhcCceeEEeeecCCCCcccccccCCCceeeceEEEE
Q 025738           80 MVIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMY  159 (249)
Q Consensus        80 ~vTGTlFG~RrGrV~faiQed~p~~~P~lLLELaipT~~L~kEM~~GlvRIALEcek~~~~~~~~~~~~~Ll~epvWtmy  159 (249)
                      +|||||||||||||+||||+| |++.|+||||||+||++|+|||++|+|||||||+|++...+. ..+.+||+||+|+||
T Consensus         1 rvtGTlFG~RrGrV~~aiQ~d-~~s~P~lllELa~pT~~L~~EM~~GlvRIaLEc~k~~~~~~~-~~~~~Ll~ep~W~my   78 (166)
T PF04759_consen    1 RVTGTLFGHRRGRVSFAIQED-PRSPPILLLELAMPTSALVREMASGLVRIALECEKRKGKSKG-AASGSLLEEPVWTMY   78 (166)
T ss_pred             CcEEEEEecccceEEEEEecC-CCCCCeEEEEecCcHHHHHHHhhcCeEEEEEEecCCCCCCCc-ccccccccceeEEEE
Confidence            699999999999999999999 899999999999999999999999999999999997543221 124569999999999


Q ss_pred             EcCceeeeeeeecCChhHHHHHHhccceeeccceecCCCCCCCCCCCcceeeEeeeceeeeecCCcceeeeeCCCCCCCC
Q 025738          160 CNGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQ  239 (249)
Q Consensus       160 CNGRKvGYAvRRe~t~~D~~VL~~l~~VSmGAGVLP~~~g~~~~~~dgElmYMRA~FERVVGSkDSEsfyMinPdG~~Gp  239 (249)
                      ||||||||||||+||++||+||++|++|||||||||+. +....++|||||||||+|||||||+||||||||||||++||
T Consensus        79 CNGrK~GyAvRRe~t~~d~~vL~~l~~VS~GAGVlP~~-~~~~~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~Gp  157 (166)
T PF04759_consen   79 CNGRKVGYAVRREPTDDDLHVLELLRSVSMGAGVLPGG-GGGSGGGDGELMYMRARFERVVGSRDSESFYMINPDGNGGP  157 (166)
T ss_pred             ECCceeeeeEEcCCCHHHHHHHHhhheeeecceeccCc-cccCCCCCceEeeeeeeeeeeeccCCcceeEEECCCCCCCc
Confidence            99999999999999999999999999999999999983 23345689999999999999999999999999999999999


Q ss_pred             eeEEEEEec
Q 025738          240 EFSLFLLRS  248 (249)
Q Consensus       240 ELSIFflR~  248 (249)
                      ||||||+|+
T Consensus       158 ELSIFf~Rv  166 (166)
T PF04759_consen  158 ELSIFFLRV  166 (166)
T ss_pred             eEEEEEEeC
Confidence            999999996

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. At least 12 distinct members are found in Arabidopsis thaliana (Mouse-ear cress).

>TIGR01570 A_thal_3588 uncharacterized plant-specific domain TIGR01570

Probab=100.00  E-value=1.1e-94  Score=612.20  Aligned_cols=161  Identities=52%  Similarity=0.896  Sum_probs=149.5

Q ss_pred             EEeeEeeeCCCceeeEEecCCCCCCCeeEEeecCchhHHHHHhhcCceeEEeeecCCCCcccccccCCCceeeceEEEEE
Q 025738           81 VIGTIFGHRRGHVWFCIQQDRVSMKPTLLLELSMPTNQLVKEMRCGLVRIALECARPESTERIEVTSCPLRLVPVWIMYC  160 (249)
Q Consensus        81 vTGTlFG~RrGrV~faiQed~p~~~P~lLLELaipT~~L~kEM~~GlvRIALEcek~~~~~~~~~~~~~Ll~epvWtmyC  160 (249)
                      |||||||||||||+||||+| |++.|+||||||+||++|+|||++|+|||||||+|++..     ++.+||+||+|+|||
T Consensus         1 vtGTlfG~RrgrV~~~iQ~d-p~~~P~lllELa~pt~~L~~Em~~G~vRIaLEc~k~~~~-----~~~~ll~ep~W~myC   74 (161)
T TIGR01570         1 VTGTIFGYRKGRVNFCIQED-RRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRKQD-----KDSKLLSEPVWTMYC   74 (161)
T ss_pred             CeEEEecCCCCcceeeecCC-CCCCCeeeeeecCcHHHHHHHhhcCceeEEeeeeccccC-----CCccceeeeeEEEEE
Confidence            79999999999999999999 999999999999999999999999999999999997532     457899999999999


Q ss_pred             cCceeeeeeeecCChhHHHHHHhccceeeccceecCCCCCCCCCCCcceeeEeeeceeeeecCCcceeeeeCCCCCCCCe
Q 025738          161 NGRKVGFAVRRKASGQNRLMLKMMQSITIGAGVIPAGLGSSGPDSGEQIIYMRANYEHMIGSADSESFHLINPDECAGQE  240 (249)
Q Consensus       161 NGRKvGYAvRRe~t~~D~~VL~~l~~VSmGAGVLP~~~g~~~~~~dgElmYMRA~FERVVGSkDSEsfyMinPdG~~GpE  240 (249)
                      |||||||||||+||++||+||++|++|||||||||+..+.. ..++||||||||+|||||||||||||||||||||+|||
T Consensus        75 NGrk~GyAvRR~~t~~d~~vL~~l~~VS~GAGVlP~~~~~~-~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~gpE  153 (161)
T TIGR01570        75 NGRKVGYAVKRSASEEDMTVLTALSKVSVGAGVLPCGKELG-GFDEDELMYMRASFERVVGSKDSESFYMINPEGNIGQE  153 (161)
T ss_pred             CCceeeEeEecCCCHHHHHHHHhhheeeecceeccCCCCCC-CCCCceEEEEeeeeeEeccccCceeEEeECCCCCCCce
Confidence            99999999999999999999999999999999999643321 12349999999999999999999999999999999999


Q ss_pred             eEEEEEec
Q 025738          241 FSLFLLRS  248 (249)
Q Consensus       241 LSIFflR~  248 (249)
                      |||||+|+
T Consensus       154 LSIF~lR~  161 (161)
T TIGR01570       154 LSIFFLRS  161 (161)
T ss_pred             EEEEEEeC
Confidence            99999996

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00