Citrus Sinensis ID: 025749


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
MAVTMLLRSLLALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHRR
ccHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEcccccEEcEEEccccccccccccEEcccccEEEEEccccccEEEEcccccccccccccccccccccccEEEccccccccccEEEEEEccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccEEEccccEEEEEEccccc
ccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccEEccEcccccccccccccEEcccccEEEEEccccccEEEEEEccEEEccccEEEEcccccccEccccccccccccEEEEEEEccccEEEEEEccccEcccEEEEEcccccccccccccccccHHccHHHEEcccccEEEEccHHHHHccccccccccccccccccccHHHHHHHHHccccEcccccccccEEEEccccEEEEEcccccc
MAVTMLLRSLLALLLTTIVLFSHNIKATTITLFnkcehpvwpgiqasagkpllarggfklppnkaytirlpplwsgrfwgrhgcrfdasgrgrcatgdcggslfcngiggsppatlaeitlgqqqdfydvslvdgyniamsilpirgsgkcsyagcvsdlnlmcpaglqvrsnsRVVACKSacfafnsprycctgsfgnpqsckptaySRIFKaacpraysyayddptsiatctgsnylltfcprhrr
MAVTMLLRSLLALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHRR
MAVtmllrsllalllttivlFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHRR
**VTMLLRSLLALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFC*****
***********ALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPR***
MAVTMLLRSLLALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHRR
***TMLLRSLLALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPR***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAVTMLLRSLLALLLTTIVLFSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query248 2.2.26 [Sep-21-2011]
P50699243 Thaumatin-like protein OS yes no 0.907 0.925 0.775 1e-104
P28493239 Pathogenesis-related prot no no 0.955 0.991 0.566 1e-68
P83332246 Thaumatin-like protein 1 N/A no 0.963 0.971 0.520 9e-64
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.963 0.971 0.475 4e-60
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.963 0.975 0.477 8e-59
O80327244 Thaumatin-like protein 1 N/A no 0.959 0.975 0.475 5e-58
Q53MB8253 Thaumatin-like protein OS no no 0.971 0.952 0.477 9e-58
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.959 0.979 0.463 5e-56
P83336212 Thaumatin-like protein 1b N/A no 0.826 0.966 0.495 8e-55
P83335242 Thaumatin-like protein 2 N/A no 0.866 0.888 0.502 1e-54
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function desciption
 Score =  377 bits (968), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/227 (77%), Positives = 200/227 (88%), Gaps = 2/227 (0%)

Query: 24  NIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHG 83
           +  A+T+  +NKC+HPVWPGIQ SAG+ LLA GGFKLP NKA++++LPPLWSGRFWGRHG
Sbjct: 17  HASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHG 76

Query: 84  CRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSIL 143
           C FD SGRG CATGDCGGSL CNG GG PPATLAEITLG + DFYDVSLVDGYN+AMSI+
Sbjct: 77  CTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMSIM 136

Query: 144 PIRGSGKCSYAGCVSDLNLMCPAGLQVRSNS--RVVACKSACFAFNSPRYCCTGSFGNPQ 201
           P++GSG+CSYAGCVSDLN MCP GLQVRS +  RVVACKSAC AFNSP+YCCTG FGNPQ
Sbjct: 137 PVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQ 196

Query: 202 SCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHRR 248
           SCKPTAYS+IFK ACP+AYSYAYDDPTSIATC+ +NY++TFCP HR 
Sbjct: 197 SCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCPHHRH 243





Arabidopsis thaliana (taxid: 3702)
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query248
449439451250 PREDICTED: thaumatin-like protein-like [ 0.967 0.96 0.815 1e-113
255584165248 Protein P21, putative [Ricinus communis] 0.919 0.919 0.849 1e-113
224118670247 predicted protein [Populus trichocarpa] 0.915 0.919 0.831 1e-109
224135541248 predicted protein [Populus trichocarpa] 0.919 0.919 0.814 1e-108
359491024244 PREDICTED: thaumatin-like protein-like [ 0.899 0.913 0.831 1e-108
147818820243 hypothetical protein VITISV_030359 [Viti 0.899 0.917 0.831 1e-108
356524682251 PREDICTED: thaumatin-like protein-like [ 0.987 0.976 0.744 1e-106
356512976245 PREDICTED: thaumatin-like protein-like [ 0.951 0.963 0.756 1e-103
79318128244 Thaumatin-like protein [Arabidopsis thal 0.915 0.930 0.777 1e-103
157849656245 thaumatin-like protein [Brassica rapa] 0.915 0.926 0.768 1e-103
>gi|449439451|ref|XP_004137499.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449510943|ref|XP_004163817.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 199/244 (81%), Positives = 216/244 (88%), Gaps = 4/244 (1%)

Query: 7   LRSLLALLLTTIVL--FSHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNK 64
           LRS++AL L T+     S  + ATTIT +NKC HPVWPGIQ SAGKPLLARGGFKLPPNK
Sbjct: 6   LRSVVALTLYTLFTSHISVLVSATTITFYNKCSHPVWPGIQPSAGKPLLARGGFKLPPNK 65

Query: 65  AYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQ 124
           +Y ++LP LWSGRFWGRHGC FDASGRG+CATGDCGGSLFCNGIGG+PPATLAEITLG  
Sbjct: 66  SYNLQLPALWSGRFWGRHGCAFDASGRGKCATGDCGGSLFCNGIGGTPPATLAEITLGND 125

Query: 125 QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS--NSRVVACKSA 182
           QDFYDVSLVDGYN+A+SI P +GSGKCSYAGCVSDLN+MCP GLQVRS  N RVVACKSA
Sbjct: 126 QDFYDVSLVDGYNLAISITPSKGSGKCSYAGCVSDLNMMCPVGLQVRSHDNRRVVACKSA 185

Query: 183 CFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTF 242
           CFAFNSPRYCCTG FGNPQSCKPTAYS+IFK ACP+AYSYAYDDPTSIATCTG NYL+TF
Sbjct: 186 CFAFNSPRYCCTGRFGNPQSCKPTAYSKIFKTACPKAYSYAYDDPTSIATCTGGNYLVTF 245

Query: 243 CPRH 246
           CP H
Sbjct: 246 CPHH 249




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584165|ref|XP_002532822.1| Protein P21, putative [Ricinus communis] gi|223527423|gb|EEF29561.1| Protein P21, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224118670|ref|XP_002317878.1| predicted protein [Populus trichocarpa] gi|222858551|gb|EEE96098.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224135541|ref|XP_002322099.1| predicted protein [Populus trichocarpa] gi|222869095|gb|EEF06226.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359491024|ref|XP_003634206.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera] gi|297734316|emb|CBI15563.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147818820|emb|CAN59843.1| hypothetical protein VITISV_030359 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356524682|ref|XP_003530957.1| PREDICTED: thaumatin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|356512976|ref|XP_003525190.1| PREDICTED: thaumatin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|79318128|ref|NP_001031064.1| Thaumatin-like protein [Arabidopsis thaliana] gi|332191570|gb|AEE29691.1| Thaumatin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|157849656|gb|ABV89611.1| thaumatin-like protein [Brassica rapa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query248
TAIR|locus:2194344244 ATLP-1 [Arabidopsis thaliana ( 0.911 0.926 0.780 4.7e-103
TAIR|locus:2027864264 AT1G73620 [Arabidopsis thalian 0.887 0.833 0.775 5.6e-100
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.870 0.878 0.596 2.4e-69
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.875 0.907 0.608 3e-69
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.883 0.886 0.570 8e-69
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.870 0.878 0.594 8e-69
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.862 0.620 0.552 1.2e-67
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.903 0.708 0.540 2.3e-64
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.854 0.595 0.534 2.9e-64
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.903 0.744 0.531 4.7e-64
TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
 Identities = 178/228 (78%), Positives = 201/228 (88%)

Query:    22 SHNIKATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGR 81
             SH   A+T+  +NKC+HPVWPGIQ SAG+ LLA GGFKLP NKA++++LPPLWSGRFWGR
Sbjct:    16 SHASAASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGR 75

Query:    82 HGCRFDASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMS 141
             HGC FD SGRG CATGDCGGSL CNG GG PPATLAEITLG + DFYDVSLVDGYN+AMS
Sbjct:    76 HGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMS 135

Query:   142 ILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNS--RVVACKSACFAFNSPRYCCTGSFGN 199
             I+P++GSG+CSYAGCVSDLN MCP GLQVRS +  RVVACKSAC AFNSP+YCCTG FGN
Sbjct:   136 IMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGN 195

Query:   200 PQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFCPRHR 247
             PQSCKPTAYS+IFK ACP+AYSYAYDDPTSIATC+ +NY++TFCP HR
Sbjct:   196 PQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCPHHR 243




GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
GO:0000226 "microtubule cytoskeleton organization" evidence=RCA
GO:0000911 "cytokinesis by cell plate formation" evidence=RCA
GO:0008283 "cell proliferation" evidence=RCA
GO:0010075 "regulation of meristem growth" evidence=RCA
TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P83332TLP1_PRUPENo assigned EC number0.52030.96370.9715N/Ano
P83335TLP2_PRUPENo assigned EC number0.50220.86690.8884N/Ano
P50699TLPH_ARATHNo assigned EC number0.77530.90720.9259yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-126
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-116
smart00205218 smart00205, THN, Thaumatin family 1e-109
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 3e-42
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 1e-38
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 1e-38
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 4e-35
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  356 bits (915), Expect = e-126
 Identities = 143/219 (65%), Positives = 170/219 (77%), Gaps = 4/219 (1%)

Query: 29  TITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDA 88
           T T++NKC   VWPGI  +AG P L  GGF+L P ++ TI  P  WSGRFWGR GC FD+
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 89  SGRGRCATGDCGGSLFCNGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIR 146
           SG+G CATGDCGG L CNG GG+PPATLAE TLG    QDFYDVSLVDGYN+ +SI P  
Sbjct: 61  SGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQG 120

Query: 147 GSGKCSYAGCVSDLNLMCPAGLQVRSNS-RVVACKSACFAFNSPRYCCTGSFGNPQSCKP 205
           GSG C  AGCV+DLN +CPA LQV+++  RVVACKSAC AFN+  YCC G++G P++CKP
Sbjct: 121 GSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCKP 180

Query: 206 TAYSRIFKAACPRAYSYAYDDPTSIATC-TGSNYLLTFC 243
           T YSR+FK ACP+AYSYAYDDPTS  TC +G+NY++TFC
Sbjct: 181 TTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 248
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 97.74
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.74
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 94.39
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=3.1e-86  Score=582.09  Aligned_cols=215  Identities=66%  Similarity=1.306  Sum_probs=207.3

Q ss_pred             EEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEeeeccccCCCCCcccccCCCCCcccccCC
Q 025749           29 TITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCGGSLFCNGI  108 (248)
Q Consensus        29 t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~g~  108 (248)
                      +|||+|||+||||||+++++|++++..+||+|+||++++|++|+.|+|||||||||+||+.|+++|+||||+|.|+|++.
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCcceeEEeec--CCCceeeeccccCccccceeccCCCCCCCCCCCccccccccCCcCccccc-CCeeeeccchhhh
Q 025749          109 GGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSACFA  185 (248)
Q Consensus       109 ~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~~~~C~~~~C~~dl~~~CP~~l~v~~-~g~~v~C~SaC~~  185 (248)
                      ++.||+|||||||+  +++|||||||||||||||+|+|+++.+.|+.++|.+|||..||.||+|++ +|+||||||||.+
T Consensus        81 ~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~~  160 (219)
T cd09218          81 GGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLA  160 (219)
T ss_pred             CCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHHh
Confidence            88999999999994  67899999999999999999998766689999999999999999999987 7899999999999


Q ss_pred             cCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecCC-CeEEEec
Q 025749          186 FNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC  243 (248)
Q Consensus       186 ~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~y~vtFC  243 (248)
                      |++|||||+|+|++|++|+|+.||++||++||+||+|||||.+|+|+|+++ +|+||||
T Consensus       161 f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         161 FNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            999999999999999999999999999999999999999999999999974 9999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 6e-58
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 3e-57
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 9e-40
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 1e-38
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-38
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 9e-38
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 2e-36
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 3e-36
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 8e-36
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 4e-35
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 4e-35
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 4e-35
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 4e-35
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 2e-34
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 1e-33
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 2e-16
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 220 bits (561), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 144/220 (65%), Gaps = 5/220 (2%) Query: 30 ITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDAS 89 IT N C + VWPG KP L+ GF+L + ++ P WSGRFWGR C DA+ Sbjct: 3 ITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAA 62 Query: 90 GRGRCATGDCG-GSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIR 146 G+ C T DCG G + CNG G PPATL EIT+ QD+YDVSLVDG+N+ MS+ P Sbjct: 63 GKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQG 122 Query: 147 GSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSACFAFNSPRYCCTGSFGNPQSCKP 205 G+G+C + C +++N +CPA LQV++ + V++CKSAC AF +YCCT P++C P Sbjct: 123 GTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPP 182 Query: 206 TAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFCP 244 T YS IF+ CP+AYSYAYDD S TC+G +Y++TFCP Sbjct: 183 TEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query248
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 5e-74
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 1e-65
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 3e-62
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 4e-57
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 8e-55
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 8e-41
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  224 bits (570), Expect = 5e-74
 Identities = 111/221 (50%), Positives = 138/221 (62%), Gaps = 5/221 (2%)

Query: 29  TITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDA 88
           TI+  N C + VWPG   S  KP L+  GF+L    ++ +  P  W+GRFW R GC  DA
Sbjct: 2   TISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDA 61

Query: 89  SGRGRCATGDCG-GSLFCNGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPI 145
           SG+  CAT DC  G + CNG G  PPATLAE  +     QDFYDVSLVDG+N+ MS+ P 
Sbjct: 62  SGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQ 121

Query: 146 RGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSACFAFNSPRYCCTGSFGNPQSCK 204
            G+G C  A C +++N +CP+ LQ +  +  VVAC SAC  F +P+YCCT     P++C 
Sbjct: 122 GGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCP 181

Query: 205 PTAYSRIFKAACPRAYSYAYDDPTSIATC-TGSNYLLTFCP 244
           PT YS IF  ACP AYSYAYDD     TC  G NY +TFCP
Sbjct: 182 PTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query248
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 94.65
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=4.7e-90  Score=606.39  Aligned_cols=217  Identities=51%  Similarity=1.046  Sum_probs=210.1

Q ss_pred             eEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCCceeEEeeeccccCCCCCcccccCCCC-Cccccc
Q 025749           28 TTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLWSGRFWGRHGCRFDASGRGRCATGDCG-GSLFCN  106 (248)
Q Consensus        28 ~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~d~~g~~~C~TGdCg-g~l~C~  106 (248)
                      ++|||+|+|+|||||++++++|++++.++||+|+||+++++.+|++|+|||||||||+||++|+++|+||||+ |.|+|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            5899999999999999999999999899999999999999999999999999999999999999999999999 999999


Q ss_pred             CCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCCCCCCCCCCCccccccccCCcCccccc-CCeeeeccchh
Q 025749          107 GIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSAC  183 (248)
Q Consensus       107 g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~~~~C~~~~C~~dl~~~CP~~l~v~~-~g~~v~C~SaC  183 (248)
                      +.++.||+|||||+|+  +++|||||||||||||||+|+|+++.+.|+.++|.+|||..||.|||+++ +|++|||||||
T Consensus        81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC  160 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSAC  160 (222)
T ss_dssp             TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHH
T ss_pred             CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccc
Confidence            8889999999999994  57999999999999999999998866789999999999999999999987 78999999999


Q ss_pred             hhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecCC-CeEEEecC
Q 025749          184 FAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFCP  244 (248)
Q Consensus       184 ~~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~~-~y~vtFCP  244 (248)
                      .+|++|||||+|+|++|++|+||+||++||++||+||||||||++|||+|+++ +|+|||||
T Consensus       161 ~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          161 VKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             cccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            99999999999999999999999999999999999999999999999999987 99999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 248
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 7e-77
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 1e-76
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 4e-75
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  229 bits (584), Expect = 7e-77
 Identities = 97/220 (44%), Positives = 115/220 (52%), Gaps = 19/220 (8%)

Query: 29  TITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPP-LWSGRFWGRHGCRFD 87
             T+ N+C   VW       G       G +L   +++ I  P    + R W R GC+FD
Sbjct: 2   VFTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCKFD 54

Query: 88  ASGRGRCATGDCGGSLFCNGIGGSPPATLAEITLGQ--QQDFYDVSLVDGYNIAMSILPI 145
           ASGRG C TGDCGG L C G  G  P TLAE  L Q    DF+D+SL+DG+N+ MS LP 
Sbjct: 55  ASGRGSCRTGDCGGVLQCTG-YGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPD 113

Query: 146 RGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKP 205
            GSG      C  D+N  CPA L+         C +AC  F    YCC GS      C P
Sbjct: 114 GGSGCSRGPRCAVDVNARCPAELRQD-----GVCNNACPVFKKDEYCCVGSA--ANDCHP 166

Query: 206 TAYSRIFKAACPRAYSYAYDDPTSIATC-TGSNYLLTFCP 244
           T YSR FK  CP AYSY  DD TS  TC  G+NY + FCP
Sbjct: 167 TNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206


>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query248
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=1.8e-80  Score=538.88  Aligned_cols=202  Identities=44%  Similarity=0.925  Sum_probs=188.2

Q ss_pred             ceEEEEEeCCCCcccceeecCCCCccccCCceeeCCCCeeEEecCCCC-ceeEEeeeccccCCCCCcccccCCCCCcccc
Q 025749           27 ATTITLFNKCEHPVWPGIQASAGKPLLARGGFKLPPNKAYTIRLPPLW-SGRFWGRHGCRFDASGRGRCATGDCGGSLFC  105 (248)
Q Consensus        27 ~~t~ti~N~C~~tVw~~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~W-sGriWaRtgCs~d~~g~~~C~TGdCgg~l~C  105 (248)
                      +.+|||+|||+|||||+++++       .+|++|+||+++++.+|++| +|||||||||+||++|+++|+||||+|.|+|
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~-------~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C   73 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLEC   73 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSC
T ss_pred             CCEEEEEeCCCCCcccccccC-------CCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEec
Confidence            368999999999999999764       46899999999999999988 5999999999999999999999999999999


Q ss_pred             cCCCCCCCcceeEEeec--CCCceeeeccccCccccceeccCCC-CCCCCCCCccccccccCCcCcccccCCeeeeccch
Q 025749          106 NGIGGSPPATLAEITLG--QQQDFYDVSLVDGYNIAMSILPIRG-SGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSA  182 (248)
Q Consensus       106 ~g~~g~ppaTlaEftl~--~~~d~YDVSlVdG~NlP~~i~P~~~-~~~C~~~~C~~dl~~~CP~~l~v~~~g~~v~C~Sa  182 (248)
                      ++. +.||+|||||||+  +++|||||||||||||||+|+|+++ .+.|+.++|.+|||..||.||||+     .||+||
T Consensus        74 ~~~-G~pP~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~-----~~C~sa  147 (208)
T d1auna_          74 KGW-GKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVP-----GGCNNP  147 (208)
T ss_dssp             SSC-CCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEET-----TEECCH
T ss_pred             CCC-CCCCcceEEEEeccCCCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccC-----CCCccc
Confidence            974 7899999999994  7899999999999999999999874 568999999999999999999984     489999


Q ss_pred             hhhcCCCCcccCCCCCCCCCCCCchhhHHHHhhCCCcccCCCCCCCCceeecC--CCeEEEecCCC
Q 025749          183 CFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTG--SNYLLTFCPRH  246 (248)
Q Consensus       183 C~~~~~d~~CC~g~~~~~~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~--~~y~vtFCP~~  246 (248)
                      |.+|++|||||+     +++|+|++||++||++||+||||||||++|||+|++  .+|+|||||.+
T Consensus       148 C~~~~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~g  208 (208)
T d1auna_         148 CTTFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG  208 (208)
T ss_dssp             HHHTCSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred             eeecCCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCCC
Confidence            999999999997     478999999999999999999999999999999987  48999999975



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure