Citrus Sinensis ID: 025818

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
MNMEARVGVVVEGGQRALNTAHSSVVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
ccccHHHHHHHcccHHHHHccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccc
ccHHHHHHHHHHcccHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHcccHEEEccccHHHHHHccHHHHHHHHHcc
MNMEARVGVVVEGGQRALNTAHSSVVDASarkflqqpqqpqhnlsvpkrslnqHQAQIGTVQQLLAGGIagafsktctapLARLTILFQVQGMHsdlaalskpSILREASRIANEEGFRAFWKGNLVTIAhrlpyssvnfYCYEHYKNFLQSVLGldnhresasvnlgvhfvggglagmtaasatyplDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
MNMEARVGVVveggqralnTAHSSVVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
MNMEARVGVVVEGGQRALNTAHSSVVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
********************************************************QIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLL***
***EARVGVVVEGGQRALNTAHSSVVDASARKFLQQPQQPQHNLSV************GTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQG***********SILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
MNMEARVGVVVEGGQRALNTAHSSVVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
*NMEARVGVVVEGGQRALNTAHSSVVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNMEARVGVVVEGGQRALNTAHSSVVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSSA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query247 2.2.26 [Sep-21-2011]
Q54MZ4 434 Mitochondrial substrate c yes no 0.753 0.428 0.402 6e-29
Q8C0K5 332 Graves disease carrier pr yes no 0.639 0.475 0.411 2e-26
P16260 332 Graves disease carrier pr yes no 0.639 0.475 0.405 1e-25
Q01888 330 Graves disease carrier pr yes no 0.639 0.478 0.405 1e-25
Q5U3V7 345 Solute carrier family 25 yes no 0.672 0.481 0.397 4e-25
Q6NUK1 477 Calcium-binding mitochond no no 0.773 0.400 0.344 5e-25
P16261 322 Graves disease carrier pr yes no 0.639 0.490 0.393 3e-24
Q7T0U6 473 Calcium-binding mitochond N/A no 0.720 0.376 0.317 3e-24
Q7ZY36 473 Calcium-binding mitochond N/A no 0.720 0.376 0.312 6e-24
O18757 475 Calcium-binding mitochond no no 0.765 0.397 0.334 1e-23
>sp|Q54MZ4|MCFB_DICDI Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1 Back     alignment and function desciption
 Score =  127 bits (319), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 108/194 (55%), Gaps = 8/194 (4%)

Query: 41  QHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAAL 100
           +H L    + +    A + + + LL+GG+AGA S+TCT+PL RL IL QV  M+ +  A 
Sbjct: 119 EHWLQYSTKPIVHAPADVPSWKLLLSGGVAGAVSRTCTSPLERLKILNQVGHMNLEQNAP 178

Query: 101 SKPS--ILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDN 158
                 I++    +   EGF  F+KGN   +    PYS++ F  YE YKNFL     L+N
Sbjct: 179 KYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFL-----LNN 233

Query: 159 HRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREE 218
           + ++        FVGG  AG+T+   TYPLDL+R+RL  Q     Y GI  + + I REE
Sbjct: 234 NDQTHLTTYENLFVGGA-AGVTSLLCTYPLDLIRSRLTVQVFGNKYNGIADTCKMIIREE 292

Query: 219 GFLGLYKGLGATLL 232
           G  GLYKGL A+ L
Sbjct: 293 GVAGLYKGLFASAL 306
Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q8C0K5|GDC_MOUSE Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1 Back     alignment and function description
>sp|P16260|GDC_HUMAN Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=1 SV=3 Back     alignment and function description
>sp|Q01888|GDC_BOVIN Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1 Back     alignment and function description
>sp|Q5U3V7|S2543_DANRE Solute carrier family 25 member 43 OS=Danio rerio GN=slc25a43 PE=2 SV=1 Back     alignment and function description
>sp|Q6NUK1|SCMC1_HUMAN Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2 Back     alignment and function description
>sp|P16261|GDC_RAT Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0U6|SCM1B_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1 Back     alignment and function description
>sp|Q7ZY36|SCM1A_XENLA Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-a PE=2 SV=2 Back     alignment and function description
>sp|O18757|SCMC1_RABIT Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
224140313346 predicted protein [Populus trichocarpa] 0.874 0.624 0.734 4e-95
224090807347 predicted protein [Populus trichocarpa] 0.890 0.634 0.735 4e-90
449448592 349 PREDICTED: mitochondrial substrate carri 0.898 0.636 0.733 3e-89
449516015 349 PREDICTED: mitochondrial substrate carri 0.898 0.636 0.729 1e-88
296086165277 unnamed protein product [Vitis vinifera] 0.890 0.794 0.721 3e-88
225440510336 PREDICTED: mitochondrial substrate carri 0.850 0.625 0.722 1e-87
225449356346 PREDICTED: mitochondrial substrate carri 0.890 0.635 0.721 1e-87
22331775 365 Mitochondrial substrate carrier family p 0.927 0.627 0.698 5e-86
297820130 364 mitochondrial substrate carrier family p 0.927 0.629 0.697 1e-85
255577969 363 Mitochondrial deoxynucleotide carrier, p 0.923 0.628 0.683 4e-84
>gi|224140313|ref|XP_002323527.1| predicted protein [Populus trichocarpa] gi|222868157|gb|EEF05288.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  353 bits (906), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 174/237 (73%), Positives = 199/237 (83%), Gaps = 21/237 (8%)

Query: 1   MNMEARVGVVVEGGQRALNTA--HSSVVDASARKFLQQ---PQQPQHNLSVPKRSLNQHQ 55
           MNMEARVGVV+EGGQRALN+A  H S+VDA ARKFLQQ    Q PQH+            
Sbjct: 1   MNMEARVGVVLEGGQRALNSASTHGSIVDAGARKFLQQHNNKQSPQHS------------ 48

Query: 56  AQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASRIANE 115
            Q+GTVQQLLAGG+AGAFSKTCTAPLARLTILFQVQGMHSD+ ALSK SI +EASR+ NE
Sbjct: 49  -QLGTVQQLLAGGVAGAFSKTCTAPLARLTILFQVQGMHSDVTALSKASIWQEASRVINE 107

Query: 116 EGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGG 175
           EGFRAFWKGNLVTIAHRLPYSSV+FY YE YK+   ++LG++NHR + + +L VHF+GGG
Sbjct: 108 EGFRAFWKGNLVTIAHRLPYSSVSFYAYERYKS---AILGVENHRVNGTADLAVHFIGGG 164

Query: 176 LAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLL 232
           +AG+TAASATYPLDLVRTR+AAQR  +YY+GIWH+F TICREEGFLGLYKGLGATLL
Sbjct: 165 MAGITAASATYPLDLVRTRIAAQRNTMYYRGIWHAFHTICREEGFLGLYKGLGATLL 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224090807|ref|XP_002309090.1| predicted protein [Populus trichocarpa] gi|222855066|gb|EEE92613.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448592|ref|XP_004142050.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516015|ref|XP_004165043.1| PREDICTED: mitochondrial substrate carrier family protein B-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296086165|emb|CBI31606.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225440510|ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis vinifera] gi|297740295|emb|CBI30477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225449356|ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier family protein B isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|22331775|ref|NP_190962.2| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|17064804|gb|AAL32556.1| putative protein [Arabidopsis thaliana] gi|20259828|gb|AAM13261.1| putative protein [Arabidopsis thaliana] gi|332645641|gb|AEE79162.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297820130|ref|XP_002877948.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297323786|gb|EFH54207.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255577969|ref|XP_002529856.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223530632|gb|EEF32506.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query247
TAIR|locus:2084460 365 AT3G53940 [Arabidopsis thalian 0.931 0.630 0.697 2.8e-82
TAIR|locus:2065598 337 AT2G37890 [Arabidopsis thalian 0.720 0.528 0.719 3.3e-71
TAIR|locus:2078951 332 AT3G55640 [Arabidopsis thalian 0.773 0.575 0.708 7e-70
DICTYBASE|DDB_G0285599 434 mcfB "calcium-dependent mitoch 0.753 0.428 0.402 5e-28
MGI|MGI:1920382 332 Slc25a16 "solute carrier famil 0.635 0.472 0.414 9.4e-27
UNIPROTKB|F1Q3E3 332 SLC25A16 "Uncharacterized prot 0.639 0.475 0.405 8.4e-26
UNIPROTKB|Q01888 330 SLC25A16 "Graves disease carri 0.639 0.478 0.405 8.4e-26
UNIPROTKB|P16260 332 SLC25A16 "Graves disease carri 0.639 0.475 0.405 8.4e-26
ZFIN|ZDB-GENE-030616-69 345 slc25a43 "solute carrier famil 0.659 0.472 0.404 4.6e-25
UNIPROTKB|A6QPI5 330 SLC25A16 "Solute carrier famil 0.639 0.478 0.4 5.9e-25
TAIR|locus:2084460 AT3G53940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
 Identities = 168/241 (69%), Positives = 191/241 (79%)

Query:     3 MEARVGVVVEGGQRALNTA-----HSSVVDASARKFLQQPQQPQHNLSVP------KRSL 51
             MEARVGVVVEGGQRALNTA     H++VVDA  RK LQQ  Q Q   S        K+SL
Sbjct:     1 MEARVGVVVEGGQRALNTATTTAVHNTVVDAGNRKLLQQQPQTQQTQSCHQHHQSNKQSL 60

Query:    52 NQHQAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKPSILREASR 111
             NQ Q   GTV++LLAGGIAGAFSKTCTAPLARLTILFQ+QGM S+ A LS P+I  EASR
Sbjct:    61 NQQQGHFGTVERLLAGGIAGAFSKTCTAPLARLTILFQIQGMQSEAAILSSPNIWHEASR 120

Query:   112 IANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHF 171
             I  EEGFRAFWKGNLVT+AHRLPY +VNFY YE YK FL S   L +++ +A V++ VHF
Sbjct:   121 IVKEEGFRAFWKGNLVTVAHRLPYGAVNFYAYEEYKTFLHSNPVLQSYKGNAGVDISVHF 180

Query:   172 VGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATL 231
             V GGLAG+TAASATYPLDLVRTRL+AQR +IYY+G+ H+F+TICREEG LGLYKGLGATL
Sbjct:   181 VSGGLAGLTAASATYPLDLVRTRLSAQRNSIYYQGVGHAFRTICREEGILGLYKGLGATL 240

Query:   232 L 232
             L
Sbjct:   241 L 241
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA
TAIR|locus:2065598 AT2G37890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078951 AT3G55640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285599 mcfB "calcium-dependent mitochondrial substrate carrier" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:1920382 Slc25a16 "solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q3E3 SLC25A16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q01888 SLC25A16 "Graves disease carrier protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P16260 SLC25A16 "Graves disease carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-69 slc25a43 "solute carrier family 25, member 43" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A6QPI5 SLC25A16 "Solute carrier family 25 (Mitochondrial carrier; Graves disease autoantigen), member 16" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00160990
hypothetical protein (346 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-22
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-20
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-19
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-05
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-05
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information 
 Score = 91.4 bits (227), Expect = 8e-22
 Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%)

Query: 65  LAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSKP---SILREASRIANEEGFRAF 121
           L GGI+ A SKT  AP+ R+ +L Q Q    ++ +   P    I+    R++ E+G  + 
Sbjct: 12  LMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPRYSGIVNCFRRVSKEQGVLSL 71

Query: 122 WKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTA 181
           W+GN   +    P  + NF     +K++ +++    N +       GV+ + GGLAG ++
Sbjct: 72  WRGNTANVIRYFPTQAFNF----AFKDYFKNMFPKYNQKTDFWKFFGVNILSGGLAGASS 127

Query: 182 ASATYPLDLVRTRLAA------QRQAIYYKGIWHSFQTICREEGFLGLYKGLGATL 231
               YPLD  RTRLA+       R+   + G++     I ++ GFL LY+G G ++
Sbjct: 128 LLIVYPLDFARTRLASDIGKGGDRE---FTGLFDCLMKISKQTGFLSLYQGFGVSV 180

Length = 300
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 247
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754 294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753 317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758 297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0770 353 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0759 286 consensus Mitochondrial oxoglutarate/malate carrie 99.98
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.97
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.97
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.96
KOG0769308 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.96
KOG0755 320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.95
KOG0036 463 consensus Predicted mitochondrial carrier protein 99.95
KOG0765 333 consensus Predicted mitochondrial carrier protein 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.94
KOG0763 301 consensus Mitochondrial ornithine transporter [Ene 99.93
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0750 304 consensus Mitochondrial solute carrier protein [En 99.91
KOG0756 299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.91
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
KOG1519297 consensus Predicted mitochondrial carrier protein 99.74
KOG2745 321 consensus Mitochondrial carrier protein [General f 99.69
KOG0769308 consensus Predicted mitochondrial carrier protein 99.68
KOG1519 297 consensus Predicted mitochondrial carrier protein 99.67
KOG2954427 consensus Mitochondrial carrier protein [General f 99.61
KOG2745321 consensus Mitochondrial carrier protein [General f 99.31
KOG2954427 consensus Mitochondrial carrier protein [General f 98.65
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information 
Probab=100.00  E-value=3.2e-44  Score=296.93  Aligned_cols=223  Identities=28%  Similarity=0.445  Sum_probs=182.6

Q ss_pred             eEEeccchhhccccccc----ccchhHHhhhcCCCCCCCCCCCCccccccccCccchHHHHHHHHHHHHHHHhhhchHHH
Q 025818            8 GVVVEGGQRALNTAHSS----VVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTAPLAR   83 (247)
Q Consensus         8 ~~~~~gg~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG~~ag~~~~~~~~Pld~   83 (247)
                      .|..|.|.+++|.++..    ..+..+.+|..++..++.....      +.....+.+.+|+||++||++++++++|||+
T Consensus        76 ~I~~eEG~~g~wkGn~~~~~r~~pY~avqf~aye~~k~~~~~~------~~~~~~~~~~~l~aGalAG~~a~~~tyPLDl  149 (320)
T KOG0752|consen   76 SIYREEGLRGFWKGNGPAQIRIIPYGAVQFSAYEQYKKLVLGV------DPNGSLSPLVRLVAGALAGMTATLATYPLDL  149 (320)
T ss_pred             HHHHHhchhhhhcCcccceeeeeecchhhhhHHHHhhhhhhcc------CcccccchhHHHHHHHHHHHHHHHhcCcHHH
Confidence            34558889999988822    3444455555444433210000      0111567889999999999999999999999


Q ss_pred             HHHHHHhcccccccccCCCccHHHHHHHHHHhhcccccccchhhhhhcccccccchHhhhHHHHHH-HHhhhcCCCcCCc
Q 025818           84 LTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNF-LQSVLGLDNHRES  162 (247)
Q Consensus        84 ik~rlQ~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~~~~~k~~-~~~~~~~~~~~~~  162 (247)
                      +|||+-+|....     .|+++.+++++|+++||++|||||+.|++++..|+.++.|++||.+|++ +..      ..++
T Consensus       150 vRtRLa~q~~~~-----~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~------~~~~  218 (320)
T KOG0752|consen  150 LRTRLAVQGELK-----VYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLK------SSGN  218 (320)
T ss_pred             hhhheeeecccc-----cCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhccc------cccc
Confidence            999999886532     5899999999999999999999999999999999999999999999996 221      1222


Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhccHHHHHHHHhhccC-----CcccCcHHHHHHHHHHhhCccccccchhhhHHHHHHH
Q 025818          163 ASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQ-----AIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIK  237 (247)
Q Consensus       163 ~~~~~~~~~~~g~~ag~~~~~~~~P~d~vktr~q~~~~-----~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~r~~~~  237 (247)
                      ...+.+..+++|++||+++..++||+|+||.|||+.+-     ..++++++||+++|+++||++|||||+.|++++.+|.
T Consensus       219 ~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~  298 (320)
T KOG0752|consen  219 KELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPS  298 (320)
T ss_pred             chhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhhhhhhhccccHHHHHhccc
Confidence            34577789999999999999999999999999999863     3456899999999999999999999999999999999


Q ss_pred             HHHHHHHhcC
Q 025818          238 LESYYLLSSA  247 (247)
Q Consensus       238 ~~i~~~~y~~  247 (247)
                      .+++|++||.
T Consensus       299 ~ai~F~~Ye~  308 (320)
T KOG0752|consen  299 VAISFTTYEI  308 (320)
T ss_pred             ceeeeehHHH
Confidence            9999999973

>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
1okc_A 297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 4e-22
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-09
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure 
Iteration: 1

 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 61  VQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSK-PSILREASRIANEEGFR 119
           ++  LAGG+A A SKT  AP+ R+ +L QVQ     ++A  +   I+    RI  E+GF 
Sbjct: 8   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 67
Query: 120 AFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGM 179
           +FW+GNL  +    P  ++NF   + YK       G+D H++      G +   GG AG 
Sbjct: 68  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLG--GVDRHKQFWRYFAG-NLASGGAAGA 124
Query: 180 TAASATYPLDLVRTRL-------AAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATL 231
           T+    YPLD  RTRL       AAQR+   + G+ +    I + +G  GLY+G   ++
Sbjct: 125 TSLCFVYPLDFARTRLAADVGKGAAQRE---FTGLGNCITKIFKSDGLRGLYQGFNVSV 180
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query247
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-66
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-36
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-09
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 5e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-27
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-19
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  207 bits (529), Expect = 1e-66
 Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 8/183 (4%)

Query: 55  QAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSK-PSILREASRIA 113
              +  ++  LAGG+A A SKT  AP+ R+ +L QVQ     ++A  +   I+    RI 
Sbjct: 2   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 61

Query: 114 NEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVG 173
            E+GF +FW+GNL  +    P  ++NF   + YK      LG  +  +        +   
Sbjct: 62  KEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF---LGGVDRHKQFWRYFAGNLAS 118

Query: 174 GGLAGMTAASATYPLDLVRTRLAAQ----RQAIYYKGIWHSFQTICREEGFLGLYKGLGA 229
           GG AG T+    YPLD  RTRLAA          + G+ +    I + +G  GLY+G   
Sbjct: 119 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNV 178

Query: 230 TLL 232
           ++ 
Sbjct: 179 SVQ 181
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=8.5e-41  Score=282.16  Aligned_cols=215  Identities=24%  Similarity=0.297  Sum_probs=177.6

Q ss_pred             EEeccchhhccccccc---------ccchhHHhhhcCCCCCCCCCCCCccccccccCccchHHHHHHHHHHHHHHHhhhc
Q 025818            9 VVVEGGQRALNTAHSS---------VVDASARKFLQQPQQPQHNLSVPKRSLNQHQAQIGTVQQLLAGGIAGAFSKTCTA   79 (247)
Q Consensus         9 ~~~~gg~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aG~~ag~~~~~~~~   79 (247)
                      ++.++|.+.++++...         ...+..|+.++....+.             .+..+.+..+++|++||+++.++++
T Consensus        57 i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~-------------~~~~~~~~~~~ag~~ag~~~~~~~~  123 (303)
T 2lck_A           57 MVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKG-------------SEHAGIGSRLLAGSTTGALAVAVAQ  123 (303)
T ss_dssp             HHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCC-------------CSSCCHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------CcCCcHHHHHHHHHHHHHHHHHHcC
Confidence            4457788888887622         23344444444221111             0124577899999999999999999


Q ss_pred             hHHHHHHHHHhcccccccccCCCccHHHHHHHHHHhhcccccccchhhhhhcccccccchHhhhHHHHHHHHhhhcCCCc
Q 025818           80 PLARLTILFQVQGMHSDLAALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNH  159 (247)
Q Consensus        80 Pld~ik~rlQ~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~~~~~k~~~~~~~~~~~~  159 (247)
                      |+|+||+|+|++....  ....|+++++++++|+++||++|||||+.+++++.++..+++|.+||.+|+.+.+...    
T Consensus       124 Pld~vktrlq~~~~~~--~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~----  197 (303)
T 2lck_A          124 PTDVVKVRFQAQARAG--GGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANL----  197 (303)
T ss_dssp             HHHHHHHHHHHSCSCC--CSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTS----
T ss_pred             cHHHHHHHHhcccccC--CCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccC----
Confidence            9999999999986431  2346889999999999999999999999999999999999999999999998754221    


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHHhhccHHHHHHHHhhccCCcccCcHHHHHHHHHHhhCccccccchhhhHHHHHHHHH
Q 025818          160 RESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQAIYYKGIWHSFQTICREEGFLGLYKGLGATLLVRAIKLE  239 (247)
Q Consensus       160 ~~~~~~~~~~~~~~g~~ag~~~~~~~~P~d~vktr~q~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~r~~~~~~  239 (247)
                         ...+....+++|++||++++++++|+|+||+|||.+.. ..|+++++|+++|+++||++|||||+.|+++|.+|..+
T Consensus       198 ---~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~-~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~  273 (303)
T 2lck_A          198 ---MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL-GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNV  273 (303)
T ss_dssp             ---CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS-SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc-cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHH
Confidence               12345678999999999999999999999999999865 35999999999999999999999999999999999999


Q ss_pred             HHHHHhc
Q 025818          240 SYYLLSS  246 (247)
Q Consensus       240 i~~~~y~  246 (247)
                      ++|.+||
T Consensus       274 i~f~~ye  280 (303)
T 2lck_A          274 VMFVTYE  280 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999997
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 247
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-22
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-13
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-04
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

 Score = 91.7 bits (226), Expect = 1e-22
 Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 8/176 (4%)

Query: 55  QAQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDLAALSK-PSILREASRIA 113
              +  ++  LAGG+A A SKT  AP+ R+ +L QVQ     ++A  +   I+    RI 
Sbjct: 1   DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIP 60

Query: 114 NEEGFRAFWKGNLVTIAHRLPYSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVG 173
            E+GF +FW+GNL  +    P  ++NF   + YK      LG  +  +        +   
Sbjct: 61  KEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIF---LGGVDRHKQFWRYFAGNLAS 117

Query: 174 GGLAGMTAASATYPLDLVRTRLAAQRQAIY----YKGIWHSFQTICREEGFLGLYK 225
           GG AG T+    YPLD  RTRLAA          + G+ +    I + +G  GLY+
Sbjct: 118 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQ 173
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query247
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]

Probab=100.00  E-value=7.7e-35  Score=242.08  Aligned_cols=188  Identities=30%  Similarity=0.530  Sum_probs=166.3

Q ss_pred             CccchHHHHHHHHHHHHHHHhhhchHHHHHHHHHhccccccc-ccCCCccHHHHHHHHHHhhcccccccchhhhhhcccc
Q 025818           56 AQIGTVQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDL-AALSKPSILREASRIANEEGFRAFWKGNLVTIAHRLP  134 (247)
Q Consensus        56 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~ik~rlQ~~~~~~~~-~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~  134 (247)
                      ++.++++.|++|++||+++.++++|||+||+|+|++...... ....++++++++++++++||+++||+|+.+.+++..+
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~   81 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   81 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhc
Confidence            346789999999999999999999999999999998754332 3567899999999999999999999999999999999


Q ss_pred             cccchHhhhHHHHHHHHhhhcCCCcCCccchhhHHHHHHHHHHHHHHHHhhccHHHHHHHHhhccC----CcccCcHHHH
Q 025818          135 YSSVNFYCYEHYKNFLQSVLGLDNHRESASVNLGVHFVGGGLAGMTAASATYPLDLVRTRLAAQRQ----AIYYKGIWHS  210 (247)
Q Consensus       135 ~~~~~f~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~d~vktr~q~~~~----~~~~~~~~~~  210 (247)
                      ..+++|.+||.+++.+.+.....   ++........+++|.+|++++.++++|+|++|+|+|.+..    ...+.++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~  158 (292)
T d1okca_          82 TQALNFAFKDKYKQIFLGGVDRH---KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNC  158 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccc---cccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHH
Confidence            99999999999999988654322   2223456678899999999999999999999999999853    3467899999


Q ss_pred             HHHHHHhhCccccccchhhhHHHHHHHHHHHHHHhc
Q 025818          211 FQTICREEGFLGLYKGLGATLLVRAIKLESYYLLSS  246 (247)
Q Consensus       211 ~~~i~~~~G~~gly~G~~~~~~r~~~~~~i~~~~y~  246 (247)
                      +++++++||+++||+|+.++++|.+|+.+++|..|+
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~  194 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYD  194 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhcc
Confidence            999999999999999999999999999999999985
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure