Citrus Sinensis ID: 025904


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQVHVGREQHSHSHSLQDLSVGISVLAGIVLFLIVEKIVRYVEENSGESNSWGHGHHHHHLKSSKKLKDDDDLGKTQSESSSGTEGIVSNEVSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSDVDAADGSSSDVKSSEKKEPVQSASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
cHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccHHHHEEccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHcEEcccc
ccHHHHHHHcHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHcccccccccHcEEEEEEEEEcccc
mlgdaflhqlphafggehshshdhhenkahqvhvgreqhshshslqdLSVGISVLAGIVLFLIVEKIVRYVEensgesnswghghhhhhlksskklkddddlgktqsesssgtegivsnevsedslngdnlAQHETLLRRrkttsvdgdyksdvdaadgsssdvkssekkepvqsaSNLVFGYLNLfsdgvhnftdgMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQVHVGREQHSHSHSLQDLSVGISVLAGIVLFLIVEKIVRYVEENSgesnswghghhHHHLKSSKKLKDDDDLGKtqsesssgtegivsnevsedslngdnlaqhetllrrrkttsvdgdyksdvdaadgsssdvkssekkepvqSASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
MLGDAFLHQLPHAFggehshshdhheNKAHQVHVGREQhshshsLQDLSVGISVLAGIVLFLIVEKIVRYVEENSGESNSWghghhhhhlksskklkddddlgkTQSESSSGTEGIVSNEVSEDSLNGDNLAQHETLLRRRKTTSVDGDYksdvdaadgsssdvkssekkePVQSASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
**********************************************DLSVGISVLAGIVLFLIVEKIVRYV**********************************************************************************************************NLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLC**
MLGDAFLHQLPHAFG******************************QDLSVGISVLAGIVLFLIVEKIVRYVEENSGES*****************************************************************************************************VFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
MLGDAFLHQLPHAFG*****************************LQDLSVGISVLAGIVLFLIVEKIVRYVEE*******************************************VSNEVSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSD*********************SASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
MLGDAFLHQLPHAFG*****************************LQDLSVGISVLAGIVLFLIVEKIVRYVEE******************************************************************************************************ASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
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oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQVHVGREQHSHSHSLQDLSVGISVLAGIVLFLIVEKIVRYVEENSGESNSWGHGHHHHHLKSSKKLKDDDDLGKTQSESSSGTEGIVSNEVSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSDVDAADGSSSDVKSSEKKEPVQSASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFHLSVYLIVNGILLCPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query246 2.2.26 [Sep-21-2011]
Q9M647469 IAA-alanine resistance pr yes no 0.886 0.464 0.624 2e-56
Q9PUB8352 Zinc transporter Slc39a7 no no 0.707 0.494 0.362 1e-20
Q31125476 Zinc transporter SLC39A7 yes no 0.719 0.371 0.345 5e-16
Q92504469 Zinc transporter SLC39A7 yes no 0.743 0.390 0.327 1e-14
Q5RFD5469 Zinc transporter SLC39A7 yes no 0.743 0.390 0.327 1e-13
A8WMY3392 Histidine-rich membrane p N/A no 0.654 0.410 0.318 4e-13
Q9V3A4449 Protein catecholamines up yes no 0.707 0.387 0.277 1e-10
Q5TJF6469 Zinc transporter SLC39A7 yes no 0.252 0.132 0.5 1e-07
Q9XUC4393 Histidine-rich membrane p yes no 0.256 0.160 0.476 1e-07
Q9ULF5831 Zinc transporter ZIP10 OS no no 0.873 0.258 0.264 1e-06
>sp|Q9M647|IAR1_ARATH IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1 PE=1 SV=3 Back     alignment and function desciption
 Score =  218 bits (556), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/229 (62%), Positives = 174/229 (75%), Gaps = 11/229 (4%)

Query: 1   MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQVHVGREQHSHSHSLQDLSVGISVLAGIVL 60
           MLGDAFLHQLPHAFGG HSHS+DHHEN  H  H   +  SHSHS+QDLSVG+SVLAGIV+
Sbjct: 154 MLGDAFLHQLPHAFGGGHSHSNDHHENHDHHDHSHSDSPSHSHSIQDLSVGLSVLAGIVV 213

Query: 61  FLIVEKIVRYVEENSGESNSWGHGHHHHHLKSSKKLKDDDDLGKTQSESSSGTEGIVSNE 120
           FL+VEK+VRYVEENS  SN+WGH HHHHH   SKKLKD+ D      +SSS  + IV+  
Sbjct: 214 FLLVEKLVRYVEENSSGSNTWGHHHHHHH-AGSKKLKDEGDHNNLDQQSSS--DAIVN-- 268

Query: 121 VSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSDVDAADGSSSDVKSSEKKEPVQSASNLV 180
            S + ++G +  +    LR+RKT++ D   KS  D+    +SD KS + ++    +S+LV
Sbjct: 269 -SSEKVSGGSTDKS---LRKRKTSASDATDKS--DSGTEITSDGKSDKPEQVETRSSSLV 322

Query: 181 FGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVG 229
           FGYLNLFSDGVHNFTDGMALGSAFL+YGSVGGWSRT+FLLAHE+PQE+G
Sbjct: 323 FGYLNLFSDGVHNFTDGMALGSAFLIYGSVGGWSRTMFLLAHELPQEIG 371




May participate in auxin metabolism or response. Probable transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9PUB8|S39A7_DANRE Zinc transporter Slc39a7 (Fragment) OS=Danio rerio GN=slc39a7 PE=2 SV=1 Back     alignment and function description
>sp|Q31125|S39A7_MOUSE Zinc transporter SLC39A7 OS=Mus musculus GN=Slc39a7 PE=1 SV=2 Back     alignment and function description
>sp|Q92504|S39A7_HUMAN Zinc transporter SLC39A7 OS=Homo sapiens GN=SLC39A7 PE=1 SV=2 Back     alignment and function description
>sp|Q5RFD5|S39A7_PONAB Zinc transporter SLC39A7 OS=Pongo abelii GN=SLC39A7 PE=2 SV=1 Back     alignment and function description
>sp|A8WMY3|HKE41_CAEBR Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis briggsae GN=hke-4.1 PE=3 SV=2 Back     alignment and function description
>sp|Q9V3A4|CSUP_DROME Protein catecholamines up OS=Drosophila melanogaster GN=Catsup PE=2 SV=1 Back     alignment and function description
>sp|Q5TJF6|S39A7_CANFA Zinc transporter SLC39A7 OS=Canis familiaris GN=SLC39A7 PE=3 SV=1 Back     alignment and function description
>sp|Q9XUC4|HKE41_CAEEL Histidine-rich membrane protein KE4 homolog 1 OS=Caenorhabditis elegans GN=hke-4.1 PE=2 SV=2 Back     alignment and function description
>sp|Q9ULF5|S39AA_HUMAN Zinc transporter ZIP10 OS=Homo sapiens GN=SLC39A10 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query246
224099613 400 ZIP transporter [Populus trichocarpa] gi 0.930 0.572 0.701 7e-78
255561803 484 iaa-alanine resistance protein, putative 0.918 0.466 0.689 3e-73
356512271 485 PREDICTED: IAA-alanine resistance protei 0.910 0.461 0.649 2e-65
255644633 402 unknown [Glycine max] 0.918 0.562 0.635 2e-63
356525030 485 PREDICTED: IAA-alanine resistance protei 0.918 0.465 0.635 6e-63
225424476 483 PREDICTED: IAA-alanine resistance protei 0.902 0.459 0.659 2e-60
449445310 463 PREDICTED: IAA-alanine resistance protei 0.894 0.475 0.595 4e-56
297841515 400 hypothetical protein ARALYDRAFT_339044 [ 0.869 0.535 0.630 1e-54
18408943 469 IAA-alanine resistance protein 1 [Arabid 0.886 0.464 0.624 1e-54
326493366 499 predicted protein [Hordeum vulgare subsp 0.886 0.436 0.5 4e-48
>gi|224099613|ref|XP_002311552.1| ZIP transporter [Populus trichocarpa] gi|222851372|gb|EEE88919.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 162/231 (70%), Positives = 187/231 (80%), Gaps = 2/231 (0%)

Query: 1   MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQVHVGREQ-HSHSHSLQDLSVGISVLAGIV 59
           MLGDAFLHQLPHAFGGEH+HS DHH +  H  H G E+ H+HSHSL+DLSVGISVLAGIV
Sbjct: 73  MLGDAFLHQLPHAFGGEHTHSDDHHADNFHHAHAGDERGHAHSHSLKDLSVGISVLAGIV 132

Query: 60  LFLIVEKIVRYVEENSGESNSWGHGHHHHHLKSSKKLKDDDDL-GKTQSESSSGTEGIVS 118
           LFL+VEK+VRYVE+NS  +N+W HGHHHH+  SSKKLKDD D   KTQS+SS   +G  S
Sbjct: 133 LFLLVEKVVRYVEDNSTGANAWNHGHHHHNHNSSKKLKDDGDAHDKTQSKSSKEGDGKGS 192

Query: 119 NEVSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSDVDAADGSSSDVKSSEKKEPVQSASN 178
           +EV +DS N  N  Q E+LLR+RKT     D KSDVDAADGS+++++S  + E   S SN
Sbjct: 193 DEVLDDSSNDTNFTQSESLLRKRKTVQEGKDDKSDVDAADGSANNIRSLNENEHTLSPSN 252

Query: 179 LVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVG 229
           LVFGYLNL SDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHE+PQE+G
Sbjct: 253 LVFGYLNLISDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHELPQEIG 303




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561803|ref|XP_002521911.1| iaa-alanine resistance protein, putative [Ricinus communis] gi|223538949|gb|EEF40547.1| iaa-alanine resistance protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356512271|ref|XP_003524844.1| PREDICTED: IAA-alanine resistance protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|255644633|gb|ACU22819.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356525030|ref|XP_003531130.1| PREDICTED: IAA-alanine resistance protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|225424476|ref|XP_002285173.1| PREDICTED: IAA-alanine resistance protein 1 [Vitis vinifera] gi|297737576|emb|CBI26777.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449445310|ref|XP_004140416.1| PREDICTED: IAA-alanine resistance protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297841515|ref|XP_002888639.1| hypothetical protein ARALYDRAFT_339044 [Arabidopsis lyrata subsp. lyrata] gi|297334480|gb|EFH64898.1| hypothetical protein ARALYDRAFT_339044 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18408943|ref|NP_564921.1| IAA-alanine resistance protein 1 [Arabidopsis thaliana] gi|152125832|sp|Q9M647.3|IAR1_ARATH RecName: Full=IAA-alanine resistance protein 1; Flags: Precursor gi|6942043|gb|AAF32299.1|AF216524_1 IAA-alanine resistance protein 1 [Arabidopsis thaliana] gi|21536769|gb|AAM61101.1| unknown [Arabidopsis thaliana] gi|25054860|gb|AAN71919.1| unknown protein [Arabidopsis thaliana] gi|110738182|dbj|BAF01022.1| hypothetical protein [Arabidopsis thaliana] gi|332196628|gb|AEE34749.1| IAA-alanine resistance protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|326493366|dbj|BAJ85144.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query246
TAIR|locus:2200266469 IAR1 "IAA-ALANINE RESISTANT 1" 0.882 0.462 0.469 5.6e-45
ZFIN|ZDB-GENE-991110-20444 slc39a7 "solute carrier family 0.227 0.126 0.482 5.7e-19
FB|FBgn0002022449 Catsup "Catecholamines up" [Dr 0.199 0.109 0.48 1.5e-16
WB|WBGene00044067393 hke-4.1 [Caenorhabditis elegan 0.186 0.117 0.553 1.4e-15
MGI|MGI:95909476 Slc39a7 "solute carrier family 0.219 0.113 0.5 1.8e-14
RGD|1593280468 Slc39a7 "solute carrier family 0.219 0.115 0.5 2.2e-14
UNIPROTKB|Q5TJF6469 SLC39A7 "Zinc transporter SLC3 0.219 0.115 0.5 2.2e-14
UNIPROTKB|Q0P5C9469 SLC39A7 "Solute carrier family 0.219 0.115 0.5 2.8e-14
UNIPROTKB|F5H0B5450 SLC39A7 "Zinc transporter SLC3 0.195 0.106 0.529 2.9e-14
UNIPROTKB|G1K274523 SLC39A7 "Zinc transporter SLC3 0.219 0.103 0.5 3e-14
TAIR|locus:2200266 IAR1 "IAA-ALANINE RESISTANT 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 108/230 (46%), Positives = 133/230 (57%)

Query:     1 MLGDAFLHQLPHAFXXXXXXXXXXXXNKAHQVHVGREQXXXXXXLQDLSVGISVLAGIVL 60
             MLGDAFLHQLPHAF            N  H  H   +       +QDLSVG+SVLAGIV+
Sbjct:   154 MLGDAFLHQLPHAFGGGHSHSNDHHENHDHHDHSHSDSPSHSHSIQDLSVGLSVLAGIVV 213

Query:    61 FLIVEKIVRYVEENSGESNSWXXXXXXXXXXXXXXXXXXXXXXXTQSESSSGTEGIVSNE 120
             FL+VEK+VRYVEENS  SN+W                        Q  SS   + IV+  
Sbjct:   214 FLLVEKLVRYVEENSSGSNTWGHHHHHHHAGSKKLKDEGDHNNLDQQSSS---DAIVN-- 268

Query:   121 VSEDSLNGDNLAQHETLLRRRKTTSVDGDYXXXXXXXXXXXXXXXXXXXXXPVQS-ASNL 179
              S + ++G +    +  LR+RKT++ D                         V++ +S+L
Sbjct:   269 -SSEKVSGGST---DKSLRKRKTSASDA---TDKSDSGTEITSDGKSDKPEQVETRSSSL 321

Query:   180 VFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVG 229
             VFGYLNLFSDGVHNFTDGMALGSAFL+YGSVGGWSRT+FLLAHE+PQE+G
Sbjct:   322 VFGYLNLFSDGVHNFTDGMALGSAFLIYGSVGGWSRTMFLLAHELPQEIG 371




GO:0005576 "extracellular region" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0030001 "metal ion transport" evidence=IEA;ISS
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IDA
ZFIN|ZDB-GENE-991110-20 slc39a7 "solute carrier family 39 (zinc transporter), member 7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0002022 Catsup "Catecholamines up" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00044067 hke-4.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:95909 Slc39a7 "solute carrier family 39 (zinc transporter), member 7" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1593280 Slc39a7 "solute carrier family 39 (zinc transporter), member 7" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q5TJF6 SLC39A7 "Zinc transporter SLC39A7" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q0P5C9 SLC39A7 "Solute carrier family 39 (Zinc transporter), member 7" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F5H0B5 SLC39A7 "Zinc transporter SLC39A7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|G1K274 SLC39A7 "Zinc transporter SLC39A7" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query246
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 9e-20
COG0428266 COG0428, COG0428, Predicted divalent heavy-metal c 7e-06
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information
 Score = 85.9 bits (213), Expect = 9e-20
 Identities = 44/229 (19%), Positives = 67/229 (29%), Gaps = 64/229 (27%)

Query: 1   MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQVHVGREQHSHSHSLQDLSVGISVLAGIVL 60
           +LG AFLH LP A     S          H                    G+ VL G  L
Sbjct: 48  LLGTAFLHLLPEALEALESSPCLGDHGPWH-----------------PFAGLIVLLGFFL 90

Query: 61  FLIVEKIVRYVEENSGESNSWGHGHHHHHLKSSKKLKDDDDLGKTQSESSSGTEGIVSNE 120
            L+VEK++ Y +         GH H H H    +      D      ES+          
Sbjct: 91  VLLVEKLLTYYKG-------RGHSHGHDHGHDGEHSHTVPDEESGAVESNVVHHEHGEGP 143

Query: 121 VSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSDVDAADGSSSDVKSSEKKEPVQSASNLV 180
                                                     +     + +         
Sbjct: 144 HHHH-------------------------------------HEGHEKGESDKESGLRVRD 166

Query: 181 FGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVG 229
             +L      +H+F +G+A+G +F    S  G S  + +L HE+P+ +G
Sbjct: 167 IAWLLELGIILHSFFEGLAIGVSFS---SSTGISLFIAILFHELPEGLG 212


The ZIP family consists of zinc transport proteins and many putative metal transporters. The main contribution to this family is from the Arabidopsis thaliana ZIP protein family these proteins are responsible for zinc uptake in the plant. Also found within this family are C. elegans proteins of unknown function which are annotated as being similar to human growth arrest inducible gene product, although this protein in not found within this family. Length = 314

>gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 246
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.96
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.94
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 99.79
PRK04201265 zinc transporter ZupT; Provisional 99.65
COG0428266 Predicted divalent heavy-metal cations transporter 99.44
PLN02159337 Fe(2+) transport protein 99.07
TIGR00820324 zip ZIP zinc/iron transport family. transport has 99.03
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 97.51
KOG2474406 consensus Zinc transporter and related ZIP domain- 94.45
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 87.57
PRK04201265 zinc transporter ZupT; Provisional 86.9
COG0428266 Predicted divalent heavy-metal cations transporter 83.45
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=99.96  E-value=3.2e-30  Score=248.67  Aligned_cols=185  Identities=29%  Similarity=0.377  Sum_probs=117.6

Q ss_pred             CcchhhhhhcccccCCCCCCCCCCCCCcccc---cccccccCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 025904            1 MLGDAFLHQLPHAFGGEHSHSHDHHENKAHQ---VHVGREQHSHSHSLQDLSVGISVLAGIVLFLIVEKIVRYVEENSGE   77 (246)
Q Consensus         1 LLGDaFLHLLPHaf~g~h~h~~~~~~~h~h~---~~~~~~~~~h~h~~~~l~vGL~VL~Giv~Fl~vEK~vRil~g~~g~   77 (246)
                      |+||||||||||++... +|...   .+++.   .......+-|... +++++++||+. +..|+..||.+|.++|+..+
T Consensus       178 L~gDa~lhLiP~~l~~~-~~~~~---~~s~~~~~~~~~g~~~~~~~~-~~~~i~l~~~~-~~~~~~~~~~~~~~~g~~~~  251 (453)
T KOG2693|consen  178 LLGDALLHLIPEALGFH-SHLSN---GVSHVTSLAMTGGKYHFFSNE-SNLSIFLAVLG-VSLLFVTEKNMRALKGGGKH  251 (453)
T ss_pred             hhHHHHhhhCchhcccc-cCccC---Ccccccchhhcccceeeeccc-ccceeeeeeec-hHHhhccccchhhccCCCCC
Confidence            78999999999999732 22111   11110   0001111222222 68999999998 99999999999999987631


Q ss_pred             CCCCCCCCcccccccccccCCCCCCCCccCCCCCCCCCcccccccccccCCCchhhhHHHHhhhccCCCCCCCCCCCccc
Q 025904           78 SNSWGHGHHHHHLKSSKKLKDDDDLGKTQSESSSGTEGIVSNEVSEDSLNGDNLAQHETLLRRRKTTSVDGDYKSDVDAA  157 (246)
Q Consensus        78 ~~~~~~~~h~~~~~~~~~~~~~~~h~h~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrkrk~~~~~k~~~~~~~~~  157 (246)
                                            +.|.|+++.....                      ....++.+.    +.++.+..  
T Consensus       252 ----------------------~gh~h~~~~~~~~----------------------~~e~~~~~~----~~~~~d~~--  281 (453)
T KOG2693|consen  252 ----------------------HGHSHGHSNTYNP----------------------GSEKITLNV----KDGVGDSV--  281 (453)
T ss_pred             ----------------------CCccCCcCCCcCc----------------------ccccccccc----cccCCCcc--
Confidence                                  1122222111000                      000011110    00100000  


Q ss_pred             CCCCCccccccccccccCCcchHHHHHHHHHhhhccchhhhHHHHhhhhcccchhHHHHHHHHHhhcccccccc------
Q 025904          158 DGSSSDVKSSEKKEPVQSASNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTLFLLAHEIPQEVGFH------  231 (246)
Q Consensus       158 ~~~~~~~k~~~~~~~~~~~s~~~~g~l~l~~d~~HNf~dGlaigasf~~~~~~~G~~ttlai~lHeiP~eigd~------  231 (246)
                       +.+.+.+..+.++.+ .+++++++|||+++|++|||+|||||||||..+.. .||+|++||+|||+||||||+      
T Consensus       282 -~~~~~~~~~~~~~~~-~~~l~~~aymil~gD~~HNFtDGLAiGAaF~~s~~-~G~sTsiAVlcHElPHELGDFAILl~s  358 (453)
T KOG2693|consen  282 -SLSSSSFEHKLEEFE-VEELKKVAYMILAGDGLHNFTDGLAIGAAFTSSLL-HGISTSLAVLCHEFPHELGDFAILLRS  358 (453)
T ss_pred             -ccCCcchhccccccc-ccchhhHhHHHHhccccccchhhhhhccccccccc-hhHHHHHHHHHHhccHHHHHHHHHHHc
Confidence             011111222222222 46799999999999999999999999999999885 799999999999999999876      


Q ss_pred             ---hHHHHHHHHHhcC
Q 025904          232 ---LSVYLIVNGILLC  244 (246)
Q Consensus       232 ---~~~al~~~~l~~~  244 (246)
                         .+||+++|++++|
T Consensus       359 G~s~kqAl~lnllsal  374 (453)
T KOG2693|consen  359 GLSVKQALLLNLLSAL  374 (453)
T ss_pred             CCcHHHHHHHHHHhHH
Confidence               6999999998876



>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00