Citrus Sinensis ID: 025964

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
Protein Sequence
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQLTATTTSSTSEI
Secondary Structure (PSIPRED)
cEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEEHHHHHHHHEHEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHccccccHcHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccccccc
Coil and Loop (DISEMBL)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRkglklnpiSVMYYvspcsalclfipwiflekpkmdaletwhfpplmltLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKkeasraisddsqqtqltatttsstsei
Flexible Loop (DISEMBL)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEAsraisddsqqtqltatttsstsei
Low Complexity Region (SEG)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFgygiaiagvaayNNHKLKKEASRAIsddsqqtqltatttsstsEI
Disordered region (IsUnstruct)
**AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH******************************
Disordered Region (DISOPRED)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKR**LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN********************************
Disordered Region (DISEMBL)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK***************************
Disordered Region (DISPRO)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEAS***********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQLTATTTSSTSEI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	245	2.2.26 [Sep-21-2011]
Q94EI9	340	Probable sugar phosphate/	yes	no	0.995	0.717	0.814	1e-107
Q9C8M1	332	Probable sugar phosphate/	no	no	0.938	0.692	0.781	1e-102
Q9LRP2	375	Probable sugar phosphate/	no	no	0.922	0.602	0.486	2e-58
Q3E6T0	349	Probable sugar phosphate/	no	no	0.946	0.664	0.480	3e-57
Q9SUV2	350	Probable sugar phosphate/	no	no	0.938	0.657	0.463	2e-56
Q9LFN3	351	Probable sugar phosphate/	no	no	0.885	0.618	0.504	6e-56
Q9LNH5	367	Probable sugar phosphate/	no	no	0.987	0.659	0.469	9e-56
Q9SKJ7	347	Probable sugar phosphate/	no	no	0.930	0.657	0.472	9e-56
Q9SS40	355	Probable sugar phosphate/	no	no	0.844	0.583	0.324	5e-18
Q9FYE5	309	Probable sugar phosphate/	no	no	0.844	0.669	0.314	8e-17

>sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1

 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 223/248 (89%), Gaps = 4/248 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMS+ISFGV+
Sbjct: 93  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVL 152

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGE+NINWIGVVYQMGGVVGEALRLIFME+LVKRKG+KLNPIS+MYYVSPCSA+CLF
Sbjct: 153 VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 212

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEK K+D    W+F  ++LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct: 213 VPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 272

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAIS----DDSQQTQLTA 236
           VVL SALLFADTKLTIINLFGY IAIAGVAAYNNHKLKKEAS+ ++     D++   L +
Sbjct: 273 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVVTTETPGDAESIPLVS 332

Query: 237 TTTSSTSE 244
              ++T  
Sbjct: 333 QGNTNTER 340

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2

 Score =  372 bits (954), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/233 (78%), Positives = 205/233 (87%), Gaps = 3/233 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYI+VAF+QMLKAIMPVAVFILGV  GLE+MSC+MLLIMSVISFGV+
Sbjct: 95  MFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISFGVL 154

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           V+SYGE+NINW+GVVYQMGG+V EALRLI MEILVKRKG+KLNP+S+MYY+SPCSA+CLF
Sbjct: 155 VSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKGIKLNPLSLMYYMSPCSAICLF 214

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           IPWIFLEK KMD   TW+F  L+L+LN LCTFALNLSVFLVIS TSALTIR+AGVVKDW+
Sbjct: 215 IPWIFLEKSKMD---TWNFHVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWL 271

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQ 233
           VVL SALLFA+TKLTIINLFGY +AI GVA YNNHK K   S  +   S +  
Sbjct: 272 VVLVSALLFAETKLTIINLFGYAVAIVGVATYNNHKPKNGESITLVSQSPKNS 324

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana GN=At3g17430 PE=2 SV=1

 Score =  225 bits (573), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 111/228 (48%), Positives = 159/228 (69%), Gaps = 2/228 (0%)

Query: 2   FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
           FA +LW GNTAYL+ISVAF QMLKA+MPVA FI+ V  G +   C +   M ++S GVV+
Sbjct: 90  FASSLWFGNTAYLHISVAFIQMLKALMPVATFIMAVVCGTDKPRCDVFSNMLLVSVGVVI 149

Query: 62  ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
           +SYGEI+ N +G VYQ+ G+  EALRL+  ++L+++KGL LNPI+ +YY++PCS + L +
Sbjct: 150 SSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLAL 209

Query: 122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
           PW  LEKP M+  +   F   +   N LC  ALN S+FLVI  T A+TIRVAGV+KDW++
Sbjct: 210 PWYVLEKPTMEVSQI-QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268

Query: 182 VLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK-EASRAISDD 228
           +  S ++F ++ +T +N+ GY IA+ GV  YN  K++  +AS+  +D 
Sbjct: 269 IALSTVIFPESTITGLNITGYAIALCGVVMYNYIKVRDVKASQPTADS 316

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1

 Score =  221 bits (563), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/233 (48%), Positives = 158/233 (67%), Gaps = 1/233 (0%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           +++++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E      ++ M  ISFGV 
Sbjct: 95  LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVA 154

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           +A+YGE   +  GV+ Q+G V  EA RL+ ++IL+  KG+ LNPI+ +YYV+PC    LF
Sbjct: 155 IAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLAFLF 214

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           IPWI +E P +    ++HF  L+   N  C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct: 215 IPWIVVEFPILRDTSSFHFDYLIFGTNSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQ 233
           ++ FS  +  DT +T INLFGYGIA  GVA YN+ KL+   ++     +QQ  
Sbjct: 275 LIAFSWSVIKDT-VTPINLFGYGIAFLGVAYYNHAKLQALKAKEAQKTAQQVD 326

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1

 Score =  219 bits (557), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 161/235 (68%), Gaps = 5/235 (2%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           +++++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E      +  M  ISFGV 
Sbjct: 95  LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKESFKSETMTNMLSISFGVA 154

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           +A+YGE   +  GV+ Q+G V  EA RL+ ++IL+  KG+ LNPI+ +YYV+PC  + LF
Sbjct: 155 IAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLF 214

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
            PWIF+E P +    ++HF  ++   N +C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct: 215 FPWIFVELPILRETSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK----KEASRAISDDSQQ 231
           ++ FS  +  DT +T +NLFGYG+A  GVA YN+ KL+    K+A + +    ++
Sbjct: 275 LIAFSWSVIKDT-VTPLNLFGYGLAFLGVAYYNHCKLQALKAKDAQKKVQQGDEE 328

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1

 Score =  217 bits (553), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 110/218 (50%), Positives = 153/218 (70%), Gaps = 1/218 (0%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           ++A++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E      ++ M  ISFGV 
Sbjct: 95  LYALSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVA 154

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           +A+YGE   +  GV+ Q+G V  EA RL+ ++IL+  KG+KLNPI+ +YYV+PC    LF
Sbjct: 155 IAAYGEARFDVWGVILQLGAVAFEATRLVLIQILLGDKGIKLNPITSLYYVAPCCLAFLF 214

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           IPWI++E P +    ++H    +   N  C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct: 215 IPWIYVEFPVLRDTSSFHLDYAIFGANSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 218
           ++ FS  +  DT +T INLFGYGIA  GVA YN+ KL+
Sbjct: 275 LIAFSWSVIKDT-VTPINLFGYGIAFLGVAYYNHAKLQ 311

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2

 Score =  216 bits (551), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 162/243 (66%), Gaps = 1/243 (0%)

Query: 2   FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
           FA +LW GNTAYL+ISVAF QMLKA+MPVA F++ V  G +   C + + M ++S GVVV
Sbjct: 90  FASSLWFGNTAYLHISVAFIQMLKALMPVATFLMAVVCGTDKARCDVFMNMVLVSVGVVV 149

Query: 62  ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
           +SYGEIN N IG VYQ+ G+  EALRL+  ++L+++KGL LNP++ +YY++PCS + L +
Sbjct: 150 SSYGEINFNVIGTVYQVMGIFAEALRLVLTQVLLQKKGLTLNPVTSLYYIAPCSFVFLSL 209

Query: 122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
           PW  LEKP +D  +   F   +   N LC  ALN S+FLVI  T A+TIRVAGV+KDW++
Sbjct: 210 PWYVLEKPNIDVSQI-QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268

Query: 182 VLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQLTATTTSS 241
           +  S ++F ++ +T +N+ GY IA+ GV  YN  K+K   +   + DS   ++T      
Sbjct: 269 IALSTVIFPESTITGLNITGYAIALCGVVMYNYIKIKDVKAIQPTTDSLPDRITKDWKEK 328

Query: 242 TSE 244
            S 
Sbjct: 329 NSS 331

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SKJ7|PT225_ARATH Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana GN=At2g25520 PE=1 SV=1

 Score =  216 bits (551), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 111/235 (47%), Positives = 161/235 (68%), Gaps = 7/235 (2%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           +++++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E    + +  M  ISFGV 
Sbjct: 95  LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMTNMLSISFGVA 154

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           +A+YGE   +  GV  Q+G V  EA RL+ ++IL+  KG+ LNPI+ +YYV+PC  + L 
Sbjct: 155 IAAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLS 214

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIF+E P +    ++HF  ++   N +C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct: 215 VPWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK----KEASRAI--SDDS 229
           ++ FS  +  DT +T INLFGYG+A  GV  YN+ KL+    K+A + +  SDD 
Sbjct: 275 LIAFSWSVIKDT-VTPINLFGYGLAFLGVGYYNHCKLQALKAKDAQKKVQASDDE 328

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score = 91.3 bits (225), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 9/216 (4%)

Query: 9   GNTAYLYISVAFAQMLKAIMP--VAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE 66
           GN +  Y+ V+F Q + A  P   A+F   +    E       L+  V   GVV+AS GE
Sbjct: 141 GNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALVPVVT--GVVIASGGE 198

Query: 67  ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFL 126
              +W G +  +      A + +   IL+  +G +LN +++M Y+SP + + L    IF+
Sbjct: 199 PGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIALLPVTIFM 258

Query: 127 EKPKMD---ALETWH-FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVV 182
           E   M     L   H +  ++L +N +  ++ NL  FLV  HTSALT++V G  K  V V
Sbjct: 259 EPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAV 318

Query: 183 LFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 218
           + S LLF +  +T++ + GY I + GV AY   K +
Sbjct: 319 VISILLFRN-PVTVMGIGGYSITVLGVVAYGETKRR 353

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 9/216 (4%)

Query: 9   GNTAYLYISVAFAQMLKAIMP--VAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE 66
           GN +  Y+ V+F Q + A  P   A+F   +    E       L+  V   GVV+AS GE
Sbjct: 95  GNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKREAWVTYGALVPVVA--GVVIASGGE 152

Query: 67  ININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFL 126
              +W G +  +      A + +   IL+  +G KLN +++M Y+SP + + L    +F+
Sbjct: 153 PGFHWFGFIMCISATAARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFM 212

Query: 127 EKPKMD---ALETWH-FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVV 182
           E   +     L   H +  ++L +N +  ++ NL  FLV  HTSALT++V G  K  V V
Sbjct: 213 EPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAV 272

Query: 183 LFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK 218
           + S L+F +  +T++ + GY I + GV AY   K +
Sbjct: 273 VISILIFQN-PVTVMGIGGYSITVLGVVAYGETKRR 307

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
255577277	332	Triose phosphate/phosphate translocator,	0.979	0.722	0.901	1e-121
449460064	338	PREDICTED: probable sugar phosphate/phos	0.991	0.718	0.864	1e-119
225470902	337	PREDICTED: probable sugar phosphate/phos	0.946	0.688	0.892	1e-117
356525833	333	PREDICTED: probable sugar phosphate/phos	0.979	0.720	0.852	1e-115
356556928	333	PREDICTED: probable sugar phosphate/phos	0.979	0.720	0.852	1e-114
147805383	294	hypothetical protein VITISV_024311 [Viti	0.918	0.765	0.857	1e-109
297834322	339	hypothetical protein ARALYDRAFT_897714 [	0.995	0.719	0.821	1e-106
18400381	340	Nucleotide/sugar transporter family prot	0.995	0.717	0.814	1e-105
9279588	339	phosphate/phosphoenolpyruvate translocat	0.995	0.719	0.814	1e-105
227206412	248	AT3G14410 [Arabidopsis thaliana]	0.995	0.983	0.810	1e-104

>gi|255577277|ref|XP_002529520.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223531004|gb|EEF32858.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis]

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/244 (90%), Positives = 230/244 (94%), Gaps = 4/244 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGV+
Sbjct: 89  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVL 148

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPIS+MYYVSPCSALCLF
Sbjct: 149 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISMMYYVSPCSALCLF 208

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           IPWIFLEKPKM+A   W+FPPL+LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct: 209 IPWIFLEKPKMEA-HAWNFPPLVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 267

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQ---LTAT 237
           VVL SALLFADTKLT+INLFGYGIAIAGVAAYNNHKL KEASR  SD++Q  +   LTAT
Sbjct: 268 VVLLSALLFADTKLTVINLFGYGIAIAGVAAYNNHKLVKEASRRSSDEAQSVESVPLTAT 327

Query: 238 TTSS 241
           T S+
Sbjct: 328 TNSN 331

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460064|ref|XP_004147766.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g14410-like [Cucumis sativus] gi|449519158|ref|XP_004166602.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g14410-like [Cucumis sativus]

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/243 (86%), Positives = 225/243 (92%)

Query: 2   FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
           FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF+LGVAAGLE+MSCRMLLIMSVISFGV+V
Sbjct: 95  FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFVLGVAAGLELMSCRMLLIMSVISFGVLV 154

Query: 62  ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
           ASYGEINI+WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPIS+MYYVSPCSALCL I
Sbjct: 155 ASYGEINISWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISIMYYVSPCSALCLLI 214

Query: 122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
           PWIFLEKPKM+A E+W+FPP++L LN LCTFALNLSVFLVI+HTSALTIRVAGVVKDWVV
Sbjct: 215 PWIFLEKPKMEARESWNFPPVILVLNSLCTFALNLSVFLVITHTSALTIRVAGVVKDWVV 274

Query: 182 VLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQLTATTTSS 241
           VL SALLFAD KLT+INLFGYGIAIAGV AYNNHKLKKEASR   +DS Q +     TSS
Sbjct: 275 VLLSALLFADVKLTVINLFGYGIAIAGVVAYNNHKLKKEASRGSPNDSDQLESIPMVTSS 334

Query: 242 TSE 244
           +S 
Sbjct: 335 SSN 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470902|ref|XP_002263478.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 [Vitis vinifera] gi|297745469|emb|CBI40549.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/232 (89%), Positives = 219/232 (94%)

Query: 2   FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
           FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMSVISFGV+V
Sbjct: 94  FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEIMSCRMLLIMSVISFGVLV 153

Query: 62  ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
           ASYGEI+INW+GVVYQMGGVV EALRLIFMEILVKRKGLKLNP+SVMYYVSPCSALCLFI
Sbjct: 154 ASYGEIDINWVGVVYQMGGVVAEALRLIFMEILVKRKGLKLNPVSVMYYVSPCSALCLFI 213

Query: 122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
           PWIFLEKPKMDA  TW+FPP++L LN LCTFALNLSVFLVISHTSALTIRVAGVVKDWVV
Sbjct: 214 PWIFLEKPKMDAQGTWNFPPVVLALNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 273

Query: 182 VLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQ 233
           VL SA+LFADTKLTIINLFGYG+AIAGVAAYNN KLKKEASR  S + Q  +
Sbjct: 274 VLLSAVLFADTKLTIINLFGYGVAIAGVAAYNNSKLKKEASRNTSGEPQHLE 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525833|ref|XP_003531526.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g14410-like [Glycine max]

 Score =  418 bits (1075), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/244 (85%), Positives = 221/244 (90%), Gaps = 4/244 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF+LGVAAGLEVMS +MLLIMSVISFGV+
Sbjct: 89  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFVLGVAAGLEVMSYKMLLIMSVISFGVL 148

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGEININWIGVVYQMGGVVGEALRLIFMEI VKRKGLKLNP+SVMYYVSPCSA+CLF
Sbjct: 149 VASYGEININWIGVVYQMGGVVGEALRLIFMEIFVKRKGLKLNPLSVMYYVSPCSAICLF 208

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEKPKMD    W+FPP++L LNCLCTFALNLSVFLVI+HTSALTIRVAGVVKDWV
Sbjct: 209 LPWIFLEKPKMDEHGPWNFPPVLLILNCLCTFALNLSVFLVITHTSALTIRVAGVVKDWV 268

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQ----QTQLTA 236
           VVL SA+LFADTKLT+INLFGY IAIAGVAAYNN KLKKE SR  SDDS     Q Q + 
Sbjct: 269 VVLLSAVLFADTKLTLINLFGYAIAIAGVAAYNNCKLKKETSRDTSDDSDPESSQMQESQ 328

Query: 237 TTTS 240
             TS
Sbjct: 329 PLTS 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556928|ref|XP_003546772.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g14410-like [Glycine max]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/244 (85%), Positives = 220/244 (90%), Gaps = 4/244 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVF+LGVAAGLEVMS +ML IMSVISFGV+
Sbjct: 89  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFVLGVAAGLEVMSYKMLSIMSVISFGVL 148

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGEININWIGVVYQMGGVVGEALRLIFMEI VKRKGLKLNPISVMYYVSPCSA+CLF
Sbjct: 149 VASYGEININWIGVVYQMGGVVGEALRLIFMEIFVKRKGLKLNPISVMYYVSPCSAICLF 208

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEKPKMD    W+FPP++L LNCLCTFALNLSVFLVI+HTSALTIRVAGVVKDWV
Sbjct: 209 LPWIFLEKPKMDEHGPWNFPPVLLILNCLCTFALNLSVFLVITHTSALTIRVAGVVKDWV 268

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQ----QTQLTA 236
           VVL SA+LFADTKLT+INLFGY IAIAGVAAYNN KLKKE SR  SDDS     Q Q + 
Sbjct: 269 VVLLSAVLFADTKLTLINLFGYAIAIAGVAAYNNCKLKKETSRDTSDDSNPESSQRQESQ 328

Query: 237 TTTS 240
             TS
Sbjct: 329 PLTS 332

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805383|emb|CAN71953.1| hypothetical protein VITISV_024311 [Vitis vinifera]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/232 (85%), Positives = 212/232 (91%), Gaps = 7/232 (3%)

Query: 2   FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
           FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMSVISFGV+V
Sbjct: 58  FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEIMSCRMLLIMSVISFGVLV 117

Query: 62  ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
           ASYGEI+INW+GVVYQMGGVV EALRLIFMEILVKRKGLKLNP+SV+       ALCLFI
Sbjct: 118 ASYGEIDINWVGVVYQMGGVVAEALRLIFMEILVKRKGLKLNPVSVI-------ALCLFI 170

Query: 122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
           PWIFLEKPKMDA  TW+FPP++L LN LCTFALNLSVFLVISHTSALTIRVAGVVKDWVV
Sbjct: 171 PWIFLEKPKMDAQGTWNFPPVVLALNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 230

Query: 182 VLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISDDSQQTQ 233
           VL SA+LFADTKLTIINLFGYG+AIAGVAAYNN KLKKEASR  S + Q  +
Sbjct: 231 VLLSAVLFADTKLTIINLFGYGVAIAGVAAYNNSKLKKEASRNTSGEPQHLE 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834322|ref|XP_002885043.1| hypothetical protein ARALYDRAFT_897714 [Arabidopsis lyrata subsp. lyrata] gi|297330883|gb|EFH61302.1| hypothetical protein ARALYDRAFT_897714 [Arabidopsis lyrata subsp. lyrata]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/247 (82%), Positives = 223/247 (90%), Gaps = 3/247 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMS+ISFGV+
Sbjct: 93  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVL 152

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGE+NINWIGVVYQMGGVVGEALRLIFME+LVKRKG+KLNPIS+MYYVSPCSA+CLF
Sbjct: 153 VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 212

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEK KMD    W+F  ++LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct: 213 VPWIFLEKSKMDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 272

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAISD---DSQQTQLTAT 237
           VVL SALLFADTKLTIINLFGY IAIAGVAAYNNHKLKKEAS+  ++   D +   L + 
Sbjct: 273 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVTTETSGDGESIPLVSQ 332

Query: 238 TTSSTSE 244
           T +++  
Sbjct: 333 TNTNSER 339

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400381|ref|NP_566487.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana] gi|75165421|sp|Q94EI9.1|PT314_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At3g14410 gi|15294190|gb|AAK95272.1|AF410286_1 AT3g14410/MLN21_19 [Arabidopsis thaliana] gi|20147279|gb|AAM10353.1| AT3g14410/MLN21_19 [Arabidopsis thaliana] gi|332641993|gb|AEE75514.1| Nucleotide/sugar transporter family protein [Arabidopsis thaliana]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 223/248 (89%), Gaps = 4/248 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMS+ISFGV+
Sbjct: 93  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVL 152

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGE+NINWIGVVYQMGGVVGEALRLIFME+LVKRKG+KLNPIS+MYYVSPCSA+CLF
Sbjct: 153 VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 212

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEK K+D    W+F  ++LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct: 213 VPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 272

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAIS----DDSQQTQLTA 236
           VVL SALLFADTKLTIINLFGY IAIAGVAAYNNHKLKKEAS+ ++     D++   L +
Sbjct: 273 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVVTTETPGDAESIPLVS 332

Query: 237 TTTSSTSE 244
              ++T  
Sbjct: 333 QGNTNTER 340

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9279588|dbj|BAB01046.1| phosphate/phosphoenolpyruvate translocator protein-like [Arabidopsis thaliana]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/248 (81%), Positives = 223/248 (89%), Gaps = 4/248 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMS+ISFGV+
Sbjct: 92  MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVL 151

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGE+NINWIGVVYQMGGVVGEALRLIFME+LVKRKG+KLNPIS+MYYVSPCSA+CLF
Sbjct: 152 VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 211

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEK K+D    W+F  ++LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct: 212 VPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 271

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAIS----DDSQQTQLTA 236
           VVL SALLFADTKLTIINLFGY IAIAGVAAYNNHKLKKEAS+ ++     D++   L +
Sbjct: 272 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVVTTETPGDAESIPLVS 331

Query: 237 TTTSSTSE 244
              ++T  
Sbjct: 332 QGNTNTER 339

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|227206412|dbj|BAH57261.1| AT3G14410 [Arabidopsis thaliana]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/248 (81%), Positives = 222/248 (89%), Gaps = 4/248 (1%)

Query: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
           MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMS+ISF V+
Sbjct: 1   MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFSVL 60

Query: 61  VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
           VASYGE+NINWIGVVYQMGGVVGEALRLIFME+LVKRKG+KLNPIS+MYYVSPCSA+CLF
Sbjct: 61  VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 120

Query: 121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
           +PWIFLEK K+D    W+F  ++LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct: 121 VPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180

Query: 181 VVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASRAIS----DDSQQTQLTA 236
           VVL SALLFADTKLTIINLFGY IAIAGVAAYNNHKLKKEAS+ ++     D++   L +
Sbjct: 181 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVVTTETPGDAESIPLVS 240

Query: 237 TTTSSTSE 244
              ++T  
Sbjct: 241 QGNTNTER 248

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	245
TAIR|locus:2090995	340	AT3G14410 [Arabidopsis thalian	0.918	0.661	0.835	1.4e-96
TAIR|locus:2024827	332	AT1G53660 [Arabidopsis thalian	0.893	0.659	0.779	1.6e-88
TAIR|locus:2007745	367	AT1G48230 [Arabidopsis thalian	0.804	0.536	0.505	3.5e-52
TAIR|locus:2093596	375	AT3G17430 [Arabidopsis thalian	0.804	0.525	0.5	3.1e-51
TAIR|locus:2145487	349	AT5G25400 [Arabidopsis thalian	0.906	0.636	0.458	1.1e-48
TAIR|locus:2127841	350	AT4G32390 [Arabidopsis thalian	0.885	0.62	0.454	1.4e-48
TAIR|locus:2147957	351	AT5G11230 [Arabidopsis thalian	0.885	0.618	0.463	1.8e-48
TAIR|locus:2040040	347	AT2G25520 [Arabidopsis thalian	0.885	0.625	0.454	3.7e-48
ASPGD|ASPL0000040742	400	ugtA [Emericella nidulans (tax	0.808	0.495	0.361	5.4e-31
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.8	0.552	0.307	3.6e-18

TAIR|locus:2090995 AT3G14410 [Arabidopsis thaliana (taxid:3702)]

 Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
 Identities = 188/225 (83%), Positives = 203/225 (90%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
             MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLE+MSCRMLLIMS+ISFGV+
Sbjct:    93 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEMMSCRMLLIMSIISFGVL 152

Query:    61 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
             VASYGE+NINWIGVVYQMGGVVGEALRLIFME+LVKRKG+KLNPIS+MYYVSPCSA+CLF
Sbjct:   153 VASYGELNINWIGVVYQMGGVVGEALRLIFMELLVKRKGIKLNPISLMYYVSPCSAICLF 212

Query:   121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
             +PWIFLEK K+D    W+F  ++LTLN LCTFALNLSVFLVISHTSALTIRVAGVVKDWV
Sbjct:   213 VPWIFLEKSKIDGNGPWNFHFVVLTLNSLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 272

Query:   181 VVLFSALLFADTKLTIINLFXXXXXXXXXXXXNNHKLKKEASRAI 225
             VVL SALLFADTKLTIINLF            NNHKLKKEAS+ +
Sbjct:   273 VVLVSALLFADTKLTIINLFGYAIAIAGVAAYNNHKLKKEASKVV 317

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2024827 AT1G53660 [Arabidopsis thaliana (taxid:3702)]

 Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
 Identities = 173/222 (77%), Positives = 193/222 (86%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
             MFAMTLWLGNTAYLYI+VAF+QMLKAIMPVAVFILGV  GLE+MSC+MLLIMSVISFGV+
Sbjct:    95 MFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGLEIMSCKMLLIMSVISFGVL 154

Query:    61 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
             V+SYGE+NINW+GVVYQMGG+V EALRLI MEILVKRKG+KLNP+S+MYY+SPCSA+CLF
Sbjct:   155 VSSYGELNINWVGVVYQMGGIVSEALRLILMEILVKRKGIKLNPLSLMYYMSPCSAICLF 214

Query:   121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
             IPWIFLEK KMD   TW+F  L+L+LN LCTFALNLSVFLVIS TSALTIR+AGVVKDW+
Sbjct:   215 IPWIFLEKSKMD---TWNFHVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWL 271

Query:   181 VVLFSALLFADTKLTIINLFXXXXXXXXXXXXNNHKLKKEAS 222
             VVL SALLFA+TKLTIINLF            NNHK K   S
Sbjct:   272 VVLVSALLFAETKLTIINLFGYAVAIVGVATYNNHKPKNGES 313

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2007745 AT1G48230 [Arabidopsis thaliana (taxid:3702)]

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 100/198 (50%), Positives = 142/198 (71%)

Query:     2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
             FA +LW GNTAYL+ISVAF QMLKA+MPVA F++ V  G +   C + + M ++S GVVV
Sbjct:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFLMAVVCGTDKARCDVFMNMVLVSVGVVV 149

Query:    62 ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
             +SYGEIN N IG VYQ+ G+  EALRL+  ++L+++KGL LNP++ +YY++PCS + L +
Sbjct:   150 SSYGEINFNVIGTVYQVMGIFAEALRLVLTQVLLQKKGLTLNPVTSLYYIAPCSFVFLSL 209

Query:   122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
             PW  LEKP +D  +   F   +   N LC  ALN S+FLVI  T A+TIRVAGV+KDW++
Sbjct:   210 PWYVLEKPNIDVSQI-QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268

Query:   182 VLFSALLFADTKLTIINL 199
             +  S ++F ++ +T +N+
Sbjct:   269 IALSTVIFPESTITGLNI 286

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2093596 AT3G17430 [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 99/198 (50%), Positives = 141/198 (71%)

Query:     2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
             FA +LW GNTAYL+ISVAF QMLKA+MPVA FI+ V  G +   C +   M ++S GVV+
Sbjct:    90 FASSLWFGNTAYLHISVAFIQMLKALMPVATFIMAVVCGTDKPRCDVFSNMLLVSVGVVI 149

Query:    62 ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
             +SYGEI+ N +G VYQ+ G+  EALRL+  ++L+++KGL LNPI+ +YY++PCS + L +
Sbjct:   150 SSYGEIHFNIVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLAL 209

Query:   122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
             PW  LEKP M+  +   F   +   N LC  ALN S+FLVI  T A+TIRVAGV+KDW++
Sbjct:   210 PWYVLEKPTMEVSQI-QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWIL 268

Query:   182 VLFSALLFADTKLTIINL 199
             +  S ++F ++ +T +N+
Sbjct:   269 IALSTVIFPESTITGLNI 286

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2145487 AT5G25400 [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 104/227 (45%), Positives = 148/227 (65%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
             +++++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E      ++ M  ISFGV 
Sbjct:    95 LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSETMMNMLSISFGVA 154

Query:    61 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
             +A+YGE   +  GV+ Q+G V  EA RL+ ++IL+  KG+ LNPI+ +YYV+PC    LF
Sbjct:   155 IAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLAFLF 214

Query:   121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
             IPWI +E P +    ++HF  L+   N  C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct:   215 IPWIVVEFPILRDTSSFHFDYLIFGTNSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query:   181 VVLFSALLFADTKLTIINLFXXXXXXXXXXXXNNHKLK----KEASR 223
             ++ FS  +  DT +T INLF            N+ KL+    KEA +
Sbjct:   275 LIAFSWSVIKDT-VTPINLFGYGIAFLGVAYYNHAKLQALKAKEAQK 320

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2127841 AT4G32390 [Arabidopsis thaliana (taxid:3702)]

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 99/218 (45%), Positives = 145/218 (66%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
             +++++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E      +  M  ISFGV 
Sbjct:    95 LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKESFKSETMTNMLSISFGVA 154

Query:    61 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
             +A+YGE   +  GV+ Q+G V  EA RL+ ++IL+  KG+ LNPI+ +YYV+PC  + LF
Sbjct:   155 IAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLF 214

Query:   121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
              PWIF+E P +    ++HF  ++   N +C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct:   215 FPWIFVELPILRETSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query:   181 VVLFSALLFADTKLTIINLFXXXXXXXXXXXXNNHKLK 218
             ++ FS  +  DT +T +NLF            N+ KL+
Sbjct:   275 LIAFSWSVIKDT-VTPLNLFGYGLAFLGVAYYNHCKLQ 311

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2147957 AT5G11230 [Arabidopsis thaliana (taxid:3702)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 101/218 (46%), Positives = 144/218 (66%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
             ++A++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E      ++ M  ISFGV 
Sbjct:    95 LYALSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKSDTMMNMLSISFGVA 154

Query:    61 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
             +A+YGE   +  GV+ Q+G V  EA RL+ ++IL+  KG+KLNPI+ +YYV+PC    LF
Sbjct:   155 IAAYGEARFDVWGVILQLGAVAFEATRLVLIQILLGDKGIKLNPITSLYYVAPCCLAFLF 214

Query:   121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
             IPWI++E P +    ++H    +   N  C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct:   215 IPWIYVEFPVLRDTSSFHLDYAIFGANSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query:   181 VVLFSALLFADTKLTIINLFXXXXXXXXXXXXNNHKLK 218
             ++ FS  +  DT +T INLF            N+ KL+
Sbjct:   275 LIAFSWSVIKDT-VTPINLFGYGIAFLGVAYYNHAKLQ 311

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2040040 AT2G25520 [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 99/218 (45%), Positives = 145/218 (66%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV 60
             +++++LWL N+AY+Y+SV+F QMLKA+MPVAV+ +GV    E    + +  M  ISFGV 
Sbjct:    95 LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMTNMLSISFGVA 154

Query:    61 VASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF 120
             +A+YGE   +  GV  Q+G V  EA RL+ ++IL+  KG+ LNPI+ +YYV+PC  + L 
Sbjct:   155 IAAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLS 214

Query:   121 IPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWV 180
             +PWIF+E P +    ++HF  ++   N +C FALNL+VFL++  TSALT+ VAGVVKDW+
Sbjct:   215 VPWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWL 274

Query:   181 VVLFSALLFADTKLTIINLFXXXXXXXXXXXXNNHKLK 218
             ++ FS  +  DT +T INLF            N+ KL+
Sbjct:   275 LIAFSWSVIKDT-VTPINLFGYGLAFLGVGYYNHCKLQ 311

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

ASPGD|ASPL0000040742 ugtA [Emericella nidulans (taxid:162425)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 72/199 (36%), Positives = 123/199 (61%)

Query:     2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV 61
             F+++L  GN  YLY+SVAF QMLKA  PVAV +     G+  ++ ++L  +SVI FGV++
Sbjct:   119 FSLSLICGNVTYLYLSVAFIQMLKATTPVAVLLATWGMGMAPVNLKVLTNVSVIVFGVII 178

Query:    62 ASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFI 121
             AS+GEI   +IG ++Q+ G++ EA RL+ ++ L+     K++P+  +YY +P  A+   +
Sbjct:   179 ASFGEIKFVFIGFLFQIAGIIFEATRLVMVQRLLSSAEYKMDPLVSLYYFAPVCAVMNGV 238

Query:   122 PWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVV 181
               +FLE P +     ++     L  N +  F LN+SV  +I  TS+L + + GV+KD ++
Sbjct:   239 TALFLEVPTLTMDHIYNVGVWTLLANAMVAFMLNVSVVFLIGKTSSLVMTLCGVLKDILL 298

Query:   182 VLFSALLFADTKLTIINLF 200
             V+ S +++ +T +T +  F
Sbjct:   299 VVASMVIW-NTPVTALQFF 316

GO:0008643 "carbohydrate transport" evidence=ISO;IMP

GO:0043936 "asexual sporulation resulting in formation of a cellular spore" evidence=IMP

GO:0070787 "conidiophore development" evidence=IMP

GO:0031505 "fungal-type cell wall organization" evidence=IMP

GO:0035690 "cellular response to drug" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030448 "hyphal growth" evidence=IEA

GO:0051278 "fungal-type cell wall polysaccharide biosynthetic process" evidence=IEA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 63/205 (30%), Positives = 106/205 (51%)

Query:     1 MFAMTLWLGNTAYLYISVAFAQMLKAIMP--VAVFILGVAAGLEVMSCRMLLIMSVISFG 58
             +F  ++  GN +  Y+ V+F Q + A  P   A+F   +    E       L+  V++ G
Sbjct:   133 VFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALV-PVVT-G 190

Query:    59 VVVASYGEININWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALC 118
             VV+AS GE   +W G +  +      A + +   IL+  +G +LN +++M Y+SP + + 
Sbjct:   191 VVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIA 250

Query:   119 LFIPWIFLEKPKMDALETW---H-FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAG 174
             L    IF+E   M    T    H +  ++L +N +  ++ NL  FLV  HTSALT++V G
Sbjct:   251 LLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLG 310

Query:   175 VVKDWVVVLFSALLFADTKLTIINL 199
               K  V V+ S LLF +  +T++ +
Sbjct:   311 NAKGAVAVVISILLFRNP-VTVMGI 334

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94EI9	PT314_ARATH	No assigned EC number	0.8145	0.9959	0.7176	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	245
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	5e-31
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	7e-14
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	2e-09

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  111 bits (280), Expect = 5e-31
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 9/150 (6%)

Query: 73  GVVYQMGGVVGEALRLIFME-ILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM 131
           G +  +      ALRLI  + +L K+KG KLN + ++YY+SP + + L    +F E  K+
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 132 DALE-------TWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLF 184
                            L+L L+ +  F  NLS F ++  TS LT  VAG VK  VV++ 
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 185 SALLFADTKLTIINLFGYGIAIAGVAAYNN 214
           S ++F D  +T +N+ G  IAI GV  Y+ 
Sbjct: 121 SVIIFGD-PVTFLNILGLAIAILGVVLYSY 149

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 69.4 bits (170), Expect = 7e-14
 Identities = 55/217 (25%), Positives = 88/217 (40%), Gaps = 12/217 (5%)

Query: 16  ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVV 75
           ++V+F   +KA+ P    +L      +     + L +  I  GV +AS  E++ NW G +
Sbjct: 89  VAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFL 148

Query: 76  YQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE 135
             M   +    R IF +  +  K   L+  ++  Y+S  S   L  P    E P      
Sbjct: 149 SAMISNITFVSRNIFSKKAMTIK--SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHG 206

Query: 136 TWH---------FPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSA 186
                          + L              F+++   S LT  V   +K  VV++ S 
Sbjct: 207 FMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSI 266

Query: 187 LLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASR 223
           L F  TK++   +FG GIAIAGV  Y+  K +K   +
Sbjct: 267 LFF-GTKISPQQVFGTGIAIAGVFLYSRVKAQKPKPK 302

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 14/209 (6%)

Query: 17  SVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVY 76
           +V+F  ++KA  PV   +L +    + ++    L +  I  GV +AS  E++  W+    
Sbjct: 139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWC 198

Query: 77  QMGGVVGEALRLIFMEILVKRK---GLKLNPISVMYYVSPCSALCLFIPWIFLEKPK--- 130
            M   +G +LR IF +  +K K   G  L   ++   ++  ++L      +F E  K   
Sbjct: 199 AMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP 258

Query: 131 -----MDALETWHFPPLMLT--LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVL 183
                   +  +    ++     + +  +  N   F  +   + +T  VA  +K  VV++
Sbjct: 259 VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKR-VVII 317

Query: 184 FSALLFADTKLTIINLFGYGIAIAGVAAY 212
            S+++   T++T++   G  +AI G   Y
Sbjct: 318 VSSIIIFQTQVTLLGYLGMAVAILGALLY 346

Length = 350

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	245
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.96
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.93
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.93
PRK11689	295	aromatic amino acid exporter; Provisional	99.92
PRK15430	296	putative chloramphenical resistance permease RarD;	99.92
PRK11272	292	putative DMT superfamily transporter inner membran	99.92
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.91
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.89
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.88
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.87
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.83
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.81
KOG2765	416	consensus Predicted membrane protein [Function unk	99.78
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.77
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.75
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.75
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.73
COG2962	293	RarD Predicted permeases [General function predict	99.72
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.71
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.71
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.68
KOG1580	337	consensus UDP-galactose transporter related protei	99.67
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.66
KOG1581	327	consensus UDP-galactose transporter related protei	99.66
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.63
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.63
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.59
KOG1582	367	consensus UDP-galactose transporter related protei	99.56
KOG2766	336	consensus Predicted membrane protein [Function unk	99.48
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.38
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.32
COG2510	140	Predicted membrane protein [Function unknown]	99.28
PRK15430	296	putative chloramphenical resistance permease RarD;	99.05
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.05
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.05
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.94
PLN00411	358	nodulin MtN21 family protein; Provisional	98.88
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.74
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.59
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.52
PRK11689	295	aromatic amino acid exporter; Provisional	98.47
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.46
PRK11272	292	putative DMT superfamily transporter inner membran	98.44
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.44
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.43
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.39
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.36
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.32
COG2962	293	RarD Predicted permeases [General function predict	98.26
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.25
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.21
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.2
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.14
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.1
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.09
PRK13499	345	rhamnose-proton symporter; Provisional	98.09
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	98.03
COG2510	140	Predicted membrane protein [Function unknown]	98.03
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.86
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.72
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.6
COG2076	106	EmrE Membrane transporters of cations and cationic	97.57
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.56
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.53
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.5
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.45
PRK11431	105	multidrug efflux system protein; Provisional	97.41
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.39
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.36
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.3
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.23
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.18
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.16
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.14
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.11
PRK13499	345	rhamnose-proton symporter; Provisional	97.02
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.96
COG2076	106	EmrE Membrane transporters of cations and cationic	96.96
PRK11431	105	multidrug efflux system protein; Provisional	96.94
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.62
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.58
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	96.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.25
KOG1580	337	consensus UDP-galactose transporter related protei	96.0
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.85
KOG2765	416	consensus Predicted membrane protein [Function unk	95.8
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.27
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	94.79
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.43
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.38
KOG1581	327	consensus UDP-galactose transporter related protei	93.33
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	92.81
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	91.57
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.54
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	89.13
PRK02237	109	hypothetical protein; Provisional	88.25
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	86.34
KOG3912	372	consensus Predicted integral membrane protein [Gen	84.62
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	83.15
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	82.12
PRK02237	109	hypothetical protein; Provisional	81.71
COG1742	109	Uncharacterized conserved protein [Function unknow	80.04

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1e-29  Score=213.99  Aligned_cols=212  Identities=25%  Similarity=0.307  Sum_probs=175.7

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHH
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGV   81 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~   81 (245)
                      ++.+..+.|++++|++++++++++++.|+++++++++++|||++++++.+++++++|+.+...++.+.+..|++++++++
T Consensus        75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~  154 (302)
T TIGR00817        75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISN  154 (302)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHH
Confidence            35677899999999999999999999999999999999999999999999999999998877666667788999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccc--cc----ccc-chH-HHHHHHH-HHH
Q 025964           82 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL--ET----WHF-PPL-MLTLNCL-CTF  152 (245)
Q Consensus        82 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~----~~~-~~~-~~~~~~~-~~~  152 (245)
                      ++||++.++.|+..+++  +.|+.+.+.|+...+++.+.|.....|++.....  ..    +.. ..+ .....+. +..
T Consensus       155 ~~~a~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (302)
T TIGR00817       155 ITFVSRNIFSKKAMTIK--SLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFH  232 (302)
T ss_pred             HHHHHHHHHHHHhhccC--CCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Confidence            99999999999987632  4789999999999999998888766554322110  00    111 112 1323333 333


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ..+..++.++++++|.++++.++++|++++++|++++||+ +++.+++|+.+++.|+.+|++.|
T Consensus       233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~-lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTK-ISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCC-CchhHHHHHHHHHHHHHHHHHHh
Confidence            3455677899999999999999999999999999999999 99999999999999999998654

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=4.4e-28  Score=207.46  Aligned_cols=209  Identities=21%  Similarity=0.301  Sum_probs=178.6

Q ss_pred             hhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHHHHHH
Q 025964            6 LWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEA   85 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~~~~a   85 (245)
                      ....+.|+++++++++++++++.|+++++++++++|||++++++.+++++++|+.+.+.++.++++.|++++++|++++|
T Consensus       128 ~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a  207 (350)
T PTZ00343        128 HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGSS  207 (350)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHHH
Confidence            34467999999999999999999999999999999999999999999999999999988888888999999999999999


Q ss_pred             HHHHHHHHHhhhcC---CCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc--------ccccc--cchHHHHHHHHHHH
Q 025964           86 LRLIFMEILVKRKG---LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA--------LETWH--FPPLMLTLNCLCTF  152 (245)
Q Consensus        86 ~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~  152 (245)
                      +++++.|+..++++   .+.++.+...++.+++++.++|.....|......        ...+.  ...+.++.+++..+
T Consensus       208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~  287 (350)
T PTZ00343        208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY  287 (350)
T ss_pred             HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence            99999999887542   1467888888889999999898877665432110        01111  12234566777777


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      ..+...+.++++++|.++++.++++|++++++|++++||+ +++.+++|.++++.|+.+|+..
T Consensus       288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~-lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQ-VTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCC-CchHhHHHHHHHHHHHHHHhhc
Confidence            7788888899999999999999999999999999999999 9999999999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=1.9e-28  Score=203.06  Aligned_cols=218  Identities=38%  Similarity=0.550  Sum_probs=196.2

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHH
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGV   81 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~   81 (245)
                      ++.+.+++|.|++|+|+++++++++++|+++.++++++.+|+.++..+.+++....|+.+.+.+|.++++.|.+.++.+.
T Consensus        93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~  172 (316)
T KOG1441|consen   93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISN  172 (316)
T ss_pred             HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHH
Confidence            57788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHH-HHHHhhccccc--ccccccccchHHHHHHHHHHHHHHHHH
Q 025964           82 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLF-IPWIFLEKPKM--DALETWHFPPLMLTLNCLCTFALNLSV  158 (245)
Q Consensus        82 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (245)
                      +..++++++.|+.++++++++++.+++.|+.+++.+.++ |.....|+...  ....+|........+..++++..|...
T Consensus       173 ~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~sv~~f~~Nls~  252 (316)
T KOG1441|consen  173 LAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNSVLAFLLNLSA  252 (316)
T ss_pred             HHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHHHHHHHHHHHH
Confidence            999999999999998767789999999999999999999 65555555433  022344444455566669999999999


Q ss_pred             HHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhH
Q 025964          159 FLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKE  220 (245)
Q Consensus       159 ~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~  220 (245)
                      |.++++++|.|.++.+++|.++.++.++++|+|+ .++.+..|+++.+.|+.+|++.+.+++
T Consensus       253 f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~p-vt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  253 FLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNP-VTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHcccCchhhhhhccceEEEEEEeEeeeecCC-CchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999999999999999999999999 999999999999999999999876543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=1.4e-26  Score=197.74  Aligned_cols=213  Identities=15%  Similarity=0.165  Sum_probs=165.1

Q ss_pred             hhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH------cccccchhhHHHHHHhhhhceeeeec-cc----------
Q 025964            5 TLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAA------GLEVMSCRMLLIMSVISFGVVVASYG-EI----------   67 (245)
Q Consensus         5 ~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~------~~e~~~~~~~~~~~~~~~Gv~l~~~~-~~----------   67 (245)
                      +..+.+++++|++++.++++.++.|++++++++++      +|||++++|+++++++++|+.++... +.          
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            44578899999999999999999999999999999      69999999999999999999875431 10          


Q ss_pred             -------------cch-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc
Q 025964           68 -------------NIN-WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA  133 (245)
Q Consensus        68 -------------~~~-~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  133 (245)
                                   +.+ ..|+.++++++++||+|++++|+..++.+   +.....+++..++.+...++....+......
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~---~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~  247 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP---AAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV  247 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cHhHHHHHHHHHHHHHHHHHHHHHccCCccc
Confidence                         112 45999999999999999999999877532   3346667777776666666655544322111


Q ss_pred             -ccccccchHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHh
Q 025964          134 -LETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY  212 (245)
Q Consensus       134 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~  212 (245)
                       ...+......++..++...+.+..+++++++.+|.+++++.+++|++++++|++++||+ +++.+++|+++++.|+.+.
T Consensus       248 ~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~-lt~~~~iG~~LIl~Gv~l~  326 (358)
T PLN00411        248 WIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDS-LYLGCLIGGILITLGFYAV  326 (358)
T ss_pred             ceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHH
Confidence             11122112223334444445566788999999999999999999999999999999999 9999999999999999998


Q ss_pred             hcccchhHh
Q 025964          213 NNHKLKKEA  221 (245)
Q Consensus       213 ~~~~~~~~~  221 (245)
                      ++.++++.+
T Consensus       327 ~~~~~~~~~  335 (358)
T PLN00411        327 MWGKANEEK  335 (358)
T ss_pred             Hhhhhhhhh
Confidence            876554433

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.93  E-value=1.9e-24  Score=181.77  Aligned_cols=210  Identities=13%  Similarity=0.122  Sum_probs=157.7

Q ss_pred             hhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc---ccchHHHHHHHHHH
Q 025964            5 TLWLGNTAYLY-ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---ININWIGVVYQMGG   80 (245)
Q Consensus         5 ~~~~~~~al~~-~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~~   80 (245)
                      .+.+.+.+++| .|++.+.++.++.|+++++++++++|||++++++++++++++|+.++..++   .+.++.|+.+++++
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~a  151 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAA  151 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHH
Confidence            33455678888 689999999999999999999999999999999999999999999876532   22346799999999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccc----cccccccchHHHHHHHHHHHHHHH
Q 025964           81 VVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD----ALETWHFPPLMLTLNCLCTFALNL  156 (245)
Q Consensus        81 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  156 (245)
                      +++||.+.++.|+..++.+ ..+......++...+.+.........+++...    ...++.....++..+.+.+...+.
T Consensus       152 al~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~  230 (299)
T PRK11453        152 AFSWACGNIFNKKIMSHST-RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYG  230 (299)
T ss_pred             HHHHHHHHHHHHHHhcccC-ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999765421 23334445566555544333333333332210    011111122234444455555566


Q ss_pred             HHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          157 SVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       157 ~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .+++++++.++.+++.+.+++|+++.+++++++||+ +++.+++|+.+++.|+.+..+.+
T Consensus       231 l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~-~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        231 IWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDER-LTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHHHhcch
Confidence            678889999999999999999999999999999999 99999999999999998876644

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.93  E-value=8.5e-25  Score=183.47  Aligned_cols=211  Identities=20%  Similarity=0.277  Sum_probs=173.0

Q ss_pred             hhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc---------cchHHHHHHH
Q 025964            7 WLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI---------NINWIGVVYQ   77 (245)
Q Consensus         7 ~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~   77 (245)
                      .+.+.|++|++++.++++.++..+++++++++++|||+++.|++|++++++|++++...|.         +....|++++
T Consensus        94 ~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~  173 (334)
T PF06027_consen   94 YLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLA  173 (334)
T ss_pred             HHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHH
Confidence            4567899999999999999999999999999999999999999999999999998765441         2348999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccch-HHHHHHHHHHHHHHH
Q 025964           78 MGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPP-LMLTLNCLCTFALNL  156 (245)
Q Consensus        78 l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  156 (245)
                      +.|+.+||+++++.|+..|+    .+..+.+.+..+++.++..+.....|....... .|.... .+.+..+++.+..+.
T Consensus       174 l~~a~lya~~nV~~E~~v~~----~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~-~w~~~~~~~~v~~~~~lf~~y~  248 (334)
T PF06027_consen  174 LLGAILYAVSNVLEEKLVKK----APRVEFLGMLGLFGFIISGIQLAILERSGIESI-HWTSQVIGLLVGYALCLFLFYS  248 (334)
T ss_pred             HHHHHHHHHHHHHHHHhccc----CCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc-CCChhhHHHHHHHHHHHHHHHH
Confidence            99999999999999998875    478888888888888888877776666544322 233322 233444445555555


Q ss_pred             HHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhHhhc
Q 025964          157 SVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEASR  223 (245)
Q Consensus       157 ~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~~~~  223 (245)
                      ..-..++..+|+..++-.....+.++++++++||++ +++..++|.++++.|..+|+..+++..+++
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~-~~~ly~~af~lIiiG~vvy~~~~~~~~~~~  314 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYK-FSWLYILAFALIIIGFVVYNLAESPEEEAR  314 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCcc-ccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence            566778999999888888888999999999999999 999999999999999999998766544333

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.93  E-value=5e-24  Score=175.64  Aligned_cols=201  Identities=21%  Similarity=0.160  Sum_probs=162.0

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc-ccchHHHHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-ININWIGVVYQMGGV   81 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~~~   81 (245)
                      +++..+.+.|++|++++++.++.++.|+++++++++++|||++++++.+++++++|+.++...+ .+.+..|+.++++++
T Consensus        58 ~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~  137 (260)
T TIGR00950        58 GVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSG  137 (260)
T ss_pred             HHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHH
Confidence            4566788899999999999999999999999999999999999999999999999998876543 445678999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 025964           82 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLV  161 (245)
Q Consensus        82 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (245)
                      ++|+.+.++.|+..++.  +.++.....+...++.+.+.+.....+.....   +......++..+.+.....+..++++
T Consensus       138 ~~~a~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a  212 (260)
T TIGR00950       138 ISFALGTVLYKRLVKKE--GPELLQFTGWVLLLGALLLLPFAWFLGPNPQA---LSLQWGALLYLGLIGTALAYFLWNKG  212 (260)
T ss_pred             HHHHHHHHHHhHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987542  23345555567777777777765543322211   11111123444444455666778899


Q ss_pred             HhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHH
Q 025964          162 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGV  209 (245)
Q Consensus       162 i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi  209 (245)
                      +++.++.+++.+.+++|+++.+++++++||+ ++..+++|..+++.|+
T Consensus       213 ~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~-~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       213 LTLVDPSAASILALAEPLVALLLGLLILGET-LSLPQLIGGALIIAAV  259 (260)
T ss_pred             HhcCCchHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999 9999999999999886

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.92  E-value=1e-23  Score=176.86  Aligned_cols=202  Identities=14%  Similarity=0.038  Sum_probs=151.6

Q ss_pred             hhhhhhhhhhh----ccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc-----------c
Q 025964            4 MTLWLGNTAYL----YISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI-----------N   68 (245)
Q Consensus         4 ~~~~~~~~al~----~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~-----------~   68 (245)
                      ++..+.+.+++    +.++..+.++.++.|+++++++++++|||+++++++++.++++|++++..++.           +
T Consensus        73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~  152 (295)
T PRK11689         73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIA  152 (295)
T ss_pred             HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccc
Confidence            34445555664    46778889999999999999999999999999999999999999998765432           1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHH
Q 025964           69 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC  148 (245)
Q Consensus        69 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      .+..|+.++++++++||.|+++.|+..++    .++.....   ..+.+.+.+.....+.+.  ...++. .+..+.+.+
T Consensus       153 ~~~~G~~~~l~aa~~~A~~~v~~k~~~~~----~~~~~~~~---~~~~~~l~~~~~~~~~~~--~~~~~~-~~~~l~~~~  222 (295)
T PRK11689        153 SNPLSYGLAFIGAFIWAAYCNVTRKYARG----KNGITLFF---ILTALALWIKYFLSPQPA--MVFSLP-AIIKLLLAA  222 (295)
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHhhccCC----CCchhHHH---HHHHHHHHHHHHHhcCcc--ccCCHH-HHHHHHHHH
Confidence            23569999999999999999999997543    34444322   222333333333222211  111111 122233445


Q ss_pred             HHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          149 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       149 ~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      +.+...+..+++++++.++.+++...+++|+++++++++++||+ +++.+++|+++++.|+.+....+
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhhhH
Confidence            56666678889999999999999999999999999999999999 99999999999999998876543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.92  E-value=8.5e-24  Score=177.47  Aligned_cols=204  Identities=12%  Similarity=0.068  Sum_probs=154.5

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVV   82 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~~   82 (245)
                      +.+..+.+++++++|++.++++.++.|+++++++++++|||++++++.+++++++|++++...+.+..    .+++++++
T Consensus        84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~  159 (296)
T PRK15430         84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAF  159 (296)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999998764322221    46888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc-ccccccccchHHHHHHHHHHHHHHHHHHHH
Q 025964           83 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM-DALETWHFPPLMLTLNCLCTFALNLSVFLV  161 (245)
Q Consensus        83 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (245)
                      +||.|.+..|+..+++  ..+......|..+.+.....+..   +.+.. ....++. .+..++..++.+...+.+++++
T Consensus       160 ~~a~~~i~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~g~~t~i~~~~~~~a  233 (296)
T PRK15430        160 SFAFYGLVRKKIAVEA--QTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMS-LNLLLIAAGIVTTVPLLCFTAA  233 (296)
T ss_pred             HHHHHHHHHHhcCCCC--chhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988864321  12334444555555544322221   11110 0111111 1233444455566777889999


Q ss_pred             HhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccc
Q 025964          162 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL  217 (245)
Q Consensus       162 i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~  217 (245)
                      +++.+|.+++.+.+++|+++.++|++++||+ +++.+++|+++++.|+.+......
T Consensus       234 ~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~-~~~~~~~G~~lI~~~~~v~~~~~~  288 (296)
T PRK15430        234 ATRLRLSTLGFFQYIGPTLMFLLAVTFYGEK-PGADKMVTFAFIWVALAIFVMDAI  288 (296)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 999999999999999888766543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.92  E-value=1.3e-23  Score=176.02  Aligned_cols=205  Identities=14%  Similarity=0.044  Sum_probs=159.8

Q ss_pred             hhhhhhhhhh-hccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec-cccchHHHHHHHHHHH
Q 025964            4 MTLWLGNTAY-LYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG-EININWIGVVYQMGGV   81 (245)
Q Consensus         4 ~~~~~~~~al-~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~-~~~~~~~G~~~~l~~~   81 (245)
                      ..+.+.+++. ++++++.++++.++.|+++++++++ +|||+++++++++.++++|+.++..+ +.+.+..|++++++++
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~  159 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIAS  159 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHH
Confidence            3456667788 9999999999999999999999986 69999999999999999999887643 3345568999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 025964           82 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLV  161 (245)
Q Consensus        82 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (245)
                      ++||.+.++.|+..++     ++.....++..+++..+.+.....+.+.. ...+......++..+.+.+...+..++++
T Consensus       160 ~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~~~~l~~~~  233 (292)
T PRK11272        160 ASWAFGSVWSSRLPLP-----VGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSIIAISAYMYL  233 (292)
T ss_pred             HHHHHHHHHHHhcCCC-----cchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999886432     33455677777777776666544332211 11111111223334444455556678889


Q ss_pred             HhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          162 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       162 i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      +++.++.+++.+.+++|+.+.+++++++||+ +++.+++|+.+++.|+.+.+..+
T Consensus       234 ~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~-~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        234 LRNVRPALATSYAYVNPVVAVLLGTGLGGET-LSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 99999999999999998876543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.91  E-value=4.2e-23  Score=173.77  Aligned_cols=214  Identities=24%  Similarity=0.333  Sum_probs=179.2

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecccc----c------hH
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN----I------NW   71 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~----~------~~   71 (245)
                      +.++..++|.|++|+|.+..++.+++.|+.+++++.+++|||.+++|+.++++.++|+++...+|.+    .      +.
T Consensus        74 ~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~  153 (303)
T PF08449_consen   74 FFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSA  153 (303)
T ss_pred             HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccch
Confidence            4567789999999999999999999999999999999999999999999999999999998765421    1      13


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc---cccccccc-ccccchHHHHHH
Q 025964           72 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE---KPKMDALE-TWHFPPLMLTLN  147 (245)
Q Consensus        72 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~  147 (245)
                      .|+.+.+++.++.|++.+++|+..+++  +.++.+.++|...++.+...+.....+   ........ .....+..+...
T Consensus       154 ~G~~ll~~sl~~~a~~~~~qe~~~~~~--~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~  231 (303)
T PF08449_consen  154 LGIILLLLSLLLDAFTGVYQEKLFKKY--GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF  231 (303)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence            499999999999999999999999875  578899999999998888777765521   11111100 111123446677


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccch
Q 025964          148 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK  218 (245)
Q Consensus       148 ~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~  218 (245)
                      ++.+...+...+..+++.+|.+.+++..++.++++++++++||++ +++.||+|+++++.|..+|+..+++
T Consensus       232 s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~-~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  232 SLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHP-LSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCc-CChHHHHHHHHhHHHHHHHHHhhcc
Confidence            777888778888899999999999999999999999999999999 9999999999999999999887654

; GO: 0055085 transmembrane transport

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.89  E-value=8.4e-22  Score=165.19  Aligned_cols=198  Identities=15%  Similarity=0.107  Sum_probs=148.5

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec--c-ccchHHHHHHHHHH
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG--E-ININWIGVVYQMGG   80 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~--~-~~~~~~G~~~~l~~   80 (245)
                      ....+.+++++|+|++.+.++..+.|+++++++    +||+++.  ..+.++++|+.++...  + .+.+..|+++++++
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~a  156 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGA  156 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHH
Confidence            445667889999999999999999999999886    3565544  4466778999876532  2 23457899999999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 025964           81 VVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFL  160 (245)
Q Consensus        81 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (245)
                      +++||.|.+..|+..++    .++... .++..++++.+.|.....+...   ..++......+..+.+++...+..+++
T Consensus       157 a~~~a~~~v~~r~~~~~----~~~~~~-~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~l~lgv~~t~~~~~l~~~  228 (293)
T PRK10532        157 GACWAIYILSGQRAGAE----HGPATV-AIGSLIAALIFVPIGALQAGEA---LWHWSILPLGLAVAILSTALPYSLEMI  228 (293)
T ss_pred             HHHHHHHHHHHHHHhcc----CCchHH-HHHHHHHHHHHHHHHHHccCcc---cCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998654    344444 4555666666666554432211   111111112234444555555667889


Q ss_pred             HHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          161 VISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       161 ~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ++++.++.+++.+.+++|+++.++|++++||+ +++.+++|+.+++.|++.+....
T Consensus       229 ~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        229 ALTRLPTRTFGTLMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHhcChhHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999 99999999999999999987654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.88  E-value=6.9e-22  Score=164.80  Aligned_cols=205  Identities=13%  Similarity=0.068  Sum_probs=151.5

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc-ccchHHHHHHHHHHHH
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-ININWIGVVYQMGGVV   82 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~~~~   82 (245)
                      .+..+.+.++++.+++....+.++.|+++++++++++|||+++++++++.++++|+.++...+ .+.+..|+.+++++++
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal  154 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAAL  154 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence            456777889999999999999999999999999999999999999999999999998776433 2344678889999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 025964           83 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVI  162 (245)
Q Consensus        83 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  162 (245)
                      +|+.|.+..|+..++.+...+......+.....+....+.....+.... .... ...+.+...+++.+...+..+++++
T Consensus       155 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~s~l~~~l~~~al  232 (281)
T TIGR03340       155 GTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM-FPYA-RQILPSATLGGLMIGGAYALVLWAM  232 (281)
T ss_pred             HHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccch-hhhH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999887653321111122222333332221222222111111111 0111 1112345666666767777888999


Q ss_pred             hhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHH
Q 025964          163 SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA  211 (245)
Q Consensus       163 ~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l  211 (245)
                      ++.++.+++...+++|+++.++|++++||+ +++.+++|+.+++.|+.+
T Consensus       233 ~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~-~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       233 TRLPVATVVALRNTSIVFAVVLGIWFLNER-WYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hhCCceEEEeecccHHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999 999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.87  E-value=8.6e-22  Score=158.48  Aligned_cols=211  Identities=24%  Similarity=0.429  Sum_probs=190.1

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVV   82 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~~   82 (245)
                      +++..++||+++|++++.|++.+++.++|+.+++..+.-||+++.-...+.++.+|++++.+.+.+++..|..+...+++
T Consensus        95 a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~  174 (349)
T KOG1443|consen   95 ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASL  174 (349)
T ss_pred             hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhcC-CCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc-cccc--------ccchHHHHHHHHHHH
Q 025964           83 GEALRLIFMEILVKRKG-LKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA-LETW--------HFPPLMLTLNCLCTF  152 (245)
Q Consensus        83 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~  152 (245)
                      +.++...+.+..+++.+ .+.+|...+++..+...+.++|..+.+|++.... ...+        ......+.+++..++
T Consensus       175 ~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF  254 (349)
T KOG1443|consen  175 LSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAF  254 (349)
T ss_pred             hhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHH
Confidence            99999999999999877 6788999999999999999999999889876431 1111        112234778888999


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      .+.++-+....+++..+.++.+..+-+.+.++|+.+.+|+ ++...|+|..++..|+.++..
T Consensus       255 ~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~-ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  255 LLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQ-LSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcc-hhhhHHHHHHHHHHHHHHhcc
Confidence            9988889999999999999999999999999999999999 999999999999999999843

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.83  E-value=1.5e-18  Score=144.70  Aligned_cols=202  Identities=18%  Similarity=0.198  Sum_probs=154.7

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH-HHcccccchhhHHHHHHhhhhceeeeeccccc---hHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGV-AAGLEVMSCRMLLIMSVISFGVVVASYGEINI---NWIGVVYQM   78 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~-~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~---~~~G~~~~l   78 (245)
                      .....+.+.++++++++.++.+.++.|+++.++++ +++|||++++++.++.+.+.|+.++...+...   +..|+.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l  160 (292)
T COG0697          81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLAL  160 (292)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHH
Confidence            44567788899999999999999999999999997 77799999999999999999999998765443   368999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHH-HHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHH-HHHH
Q 025964           79 GGVVGEALRLIFMEILVKRKGLKLNPISVMY-YVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF-ALNL  156 (245)
Q Consensus        79 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  156 (245)
                      .+++++|++.+..|+.. +    .++..... ++.........+.. . ....  ...... .+......++... ..+.
T Consensus       161 ~a~~~~a~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~-~~~~~~~~g~~~~~i~~~  230 (292)
T COG0697         161 AAALLWALYTALVKRLS-R----LGPVTLALLLQLLLALLLLLLFF-L-SGFG--APILSR-AWLLLLYLGVFSTGLAYL  230 (292)
T ss_pred             HHHHHHHHHHHHHHHhc-C----CChHHHHHHHHHHHHHHHHHHHH-h-cccc--ccCCHH-HHHHHHHHHHHHHHHHHH
Confidence            99999999999999876 2    34555554 44332122212221 1 1111  111111 1222333333333 4667


Q ss_pred             HHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          157 SVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       157 ~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      .+++.+++.++...+...+++|+.+.+++++++||+ ++..+++|+.+++.|+.+.+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~-~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         231 LWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEP-LSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHhcc
Confidence            788999999999999999999999999999999999 9999999999999999988765

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=3.5e-19  Score=145.13  Aligned_cols=217  Identities=18%  Similarity=0.306  Sum_probs=184.5

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHH
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGV   81 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~   81 (245)
                      |-+....+..+++|++++++++++...|+++++.+..++|.|+++..+.++..+.+|......+|.+++..|..|++...
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~  166 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANC  166 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHH
Confidence            56778888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccc-cc-cccccc--cchHHHHHHHHHHHHHHHH
Q 025964           82 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK-MD-ALETWH--FPPLMLTLNCLCTFALNLS  157 (245)
Q Consensus        82 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~--~~~~~~~~~~~~~~~~~~~  157 (245)
                      ++.+.+.++.|+..+..  +.+.+++++|..+.+...+.....+.++.+ .. ....|.  ..+..+.++|+++++.+++
T Consensus       167 ~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~  244 (314)
T KOG1444|consen  167 LTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYT  244 (314)
T ss_pred             HHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999987654  578899999999998877776665544322 11 111122  1234589999999999999


Q ss_pred             HHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhHh
Q 025964          158 VFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA  221 (245)
Q Consensus       158 ~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~~  221 (245)
                      .+++.+..|+++.++++..+...+.+-+.+.+|++ .++...+|..+-+.|..+|++.+.++++
T Consensus       245 s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~-~~~~n~~gll~~~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  245 SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKP-FTFLNVIGLLVGFFGGVLYSYATFRKKK  307 (314)
T ss_pred             HHHHHhhccccceeehhhhhhHHHHHHHHhcCCce-echhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence            99999999999999999666666766667777788 9999999999999999999998755433

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.78  E-value=7.9e-18  Score=139.26  Aligned_cols=211  Identities=16%  Similarity=0.162  Sum_probs=174.9

Q ss_pred             hhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc--------cchHHHHHH
Q 025964            5 TLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI--------NINWIGVVY   76 (245)
Q Consensus         5 ~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G~~~   76 (245)
                      ...+.|.|+.|++++..+++.+++-+||.+++.++..||++..|.+++.+.++|++++..+|.        +....|.++
T Consensus       172 anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~ll  251 (416)
T KOG2765|consen  172 ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLL  251 (416)
T ss_pred             HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHH
Confidence            456788999999999999999999999999999999999999999999999999999987632        234899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc---ccccccccchHHHHHHHHHHHH
Q 025964           77 QMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM---DALETWHFPPLMLTLNCLCTFA  153 (245)
Q Consensus        77 ~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  153 (245)
                      ++.+++.||.|.++.|+...+++.++|......+..++..+.+.|+..+.+....   +.+...+. ..++..+.+..++
T Consensus       252 aL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~-~~vv~~~ligtvv  330 (416)
T KOG2765|consen  252 ALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQF-SLVVFNNLIGTVV  330 (416)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCcee-EeeeHhhHHHHHH
Confidence            9999999999999999988776567888888888888888887877655432221   11111111 2234455666777


Q ss_pred             HHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccc
Q 025964          154 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL  217 (245)
Q Consensus       154 ~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~  217 (245)
                      .-+.+.++.-.++|..+++-..+...++++.+.++=|.+ +++.+++|.+.|++|....++..+
T Consensus       331 SDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~-~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  331 SDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKH-PSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHhheecccc
Confidence            778888889999999999999999999999999888999 999999999999999999887654

>TIGR00688 rarD rarD protein

Probab=99.77  E-value=1e-17  Score=137.87  Aligned_cols=175  Identities=12%  Similarity=-0.007  Sum_probs=123.4

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVV   82 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~~   82 (245)
                      +++..+.+++++++++++++++.++.|+++++++++++|||++++++++++++++|++++..++.+..    .+++++++
T Consensus        81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~  156 (256)
T TIGR00688        81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAF  156 (256)
T ss_pred             HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHH
Confidence            45677889999999999999999999999999999999999999999999999999987754322222    35788999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 025964           83 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVI  162 (245)
Q Consensus        83 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  162 (245)
                      +||.|.+..|+..++     +..+...+.. .......+.....+....... +....+..++..++.+...+.++..++
T Consensus       157 ~~a~~~i~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~t~i~~~l~~~a~  229 (256)
T TIGR00688       157 SFTAYGLIRKALKNT-----DLAGFCLETL-SLMPVAIYYLLQTDFATVQQT-NPFPIWLLLVLAGLITGTPLLAFVIAA  229 (256)
T ss_pred             HHHHHHHHHhhcCCC-----CcchHHHHHH-HHHHHHHHHHHHhccCccccc-CchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999886432     2222222221 111111111111111111111 111122333444455667788899999


Q ss_pred             hhchhHHHHHHhhhhhhhhhhhhhhh
Q 025964          163 SHTSALTIRVAGVVKDWVVVLFSALL  188 (245)
Q Consensus       163 ~~~~a~~~~~~~~~~pv~~~~~~~~~  188 (245)
                      |+.++.+++.+.+++|+++.+++.++
T Consensus       230 ~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       230 NRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.75  E-value=7.9e-20  Score=145.08  Aligned_cols=217  Identities=19%  Similarity=0.179  Sum_probs=179.9

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc---ccchHHHHHHHH
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE---ININWIGVVYQM   78 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l   78 (245)
                      |-+...+.|.+++|++++++.+-+++..+|+.++.++++|+|.+..-..+.++.+.|..+-+..+   ...++.|.++++
T Consensus       112 fi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGV  191 (347)
T KOG1442|consen  112 FILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGV  191 (347)
T ss_pred             eeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHH
Confidence            44567789999999999999999999999999999999999999999999999999988876544   446799999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhh-ccccccc-cccccc-chHHHHHHHHHHHHHH
Q 025964           79 GGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFL-EKPKMDA-LETWHF-PPLMLTLNCLCTFALN  155 (245)
Q Consensus        79 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~  155 (245)
                      .++++-|+..++.|+.....  +-.-+.+.+|.++.+.+..+|...+. |...... +..+.. .|.++.++|++++.++
T Consensus       192 laSl~vAlnaiytkk~l~~v--~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mg  269 (347)
T KOG1442|consen  192 LASLAVALNAIYTKKVLPPV--GDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMG  269 (347)
T ss_pred             HHHHHHHHHHHhhheecccc--cCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999765432  34558889999988877766665442 2111111 112222 2446899999999999


Q ss_pred             HHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhHh
Q 025964          156 LSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA  221 (245)
Q Consensus       156 ~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~~  221 (245)
                      +...+-+|.+||.|+.+-+..+.....+++...++|. .+..-|-|-++++.|...|.+.|..+.+
T Consensus       270 yvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~-ks~lwwtsn~~vLvgs~~YT~vk~~em~  334 (347)
T KOG1442|consen  270 YVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSET-KSGLWWTSNIVVLVGSLAYTLVKEHEMR  334 (347)
T ss_pred             heeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHH-hhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence            9888899999999999999999999999999999999 9999999999999999999988765443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.75  E-value=7.8e-17  Score=134.77  Aligned_cols=199  Identities=15%  Similarity=0.110  Sum_probs=153.8

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHH-HHHHHHHHHHHHHcccccchhh----HHHHHHhhhhceeeeecccc-------c
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKA-IMPVAVFILGVAAGLEVMSCRM----LLIMSVISFGVVVASYGEIN-------I   69 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~-~~pi~~~~~~~~~~~e~~~~~~----~~~~~~~~~Gv~l~~~~~~~-------~   69 (245)
                      ++....+.+.+.++++++.+..+.+ +.|++..+++.+++|||.++++    .+++++.++|+++....+.+       .
T Consensus        69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~  148 (290)
T TIGR00776        69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEF  148 (290)
T ss_pred             HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccccc
Confidence            3455678889999999999999988 8889999999999999999999    99999999999987653211       2


Q ss_pred             h-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHH---HHhHHHHHHHHHHHHhhcccccccccccccchHHHH
Q 025964           70 N-WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMY---YVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLT  145 (245)
Q Consensus        70 ~-~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (245)
                      + ..|+.++++++++|+.|.+..|+.      +.++.+.++   +...+++.+..++..  +....     .....+...
T Consensus       149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~  215 (290)
T TIGR00776       149 NFKKGILLLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGHI--LAKPL-----KKYAILLNI  215 (290)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHHh--cccch-----HHHHHHHHH
Confidence            2 689999999999999999999865      257777744   434444444444331  11111     111122233


Q ss_pred             HHHHHHHHHHHHHHHHHh-hchhHHHHHHhhhhhhhhhhhhhhhccccccchhhh----hhHHHHHHHHHHhhc
Q 025964          146 LNCLCTFALNLSVFLVIS-HTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINL----FGYGIAIAGVAAYNN  214 (245)
Q Consensus       146 ~~~~~~~~~~~~~~~~i~-~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~----~G~~li~~gi~l~~~  214 (245)
                      ..|+.....+.+++...+ +.++.+++.+.+.+|+.+.+++++++||+ .+..|+    +|.++++.|+.+...
T Consensus       216 ~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~-~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       216 LPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEK-KTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccC-CCcceeehhHHHHHHHHHHHHHHhc
Confidence            356666666667778888 99999999999999999999999999999 999999    999999999987644

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.73  E-value=3.6e-16  Score=127.07  Aligned_cols=196  Identities=16%  Similarity=0.172  Sum_probs=150.9

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc--------------
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI--------------   67 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~--------------   67 (245)
                      |+..-.+.+.++++++++.+++++.+..+++++++++++|+|++++||.++.+.++|+.+...++.              
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~  106 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHD  106 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccc
Confidence            556667788999999999999999999999999999999999999999999999999998764321              


Q ss_pred             ---cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccc---ccccch
Q 025964           68 ---NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE---TWHFPP  141 (245)
Q Consensus        68 ---~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~  141 (245)
                         +....|+++.++++++.++..++.++.+|+.+  .+.+....+....+.++.++.....+.....+..   .+....
T Consensus       107 ~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~  184 (244)
T PF04142_consen  107 ASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWV  184 (244)
T ss_pred             cccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHH
Confidence               11368999999999999999999999998754  5666666666666666655554443333322222   222222


Q ss_pred             H-HHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHH
Q 025964          142 L-MLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGI  204 (245)
Q Consensus       142 ~-~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~l  204 (245)
                      + .+...++    ..+..-..+|+.+...-+.......+++.++++.+||.+ ++....+|..+
T Consensus       185 ~~~i~~~a~----gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~-~s~~f~lg~~~  243 (244)
T PF04142_consen  185 WIVIFLQAI----GGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFP-PSLSFLLGAAL  243 (244)
T ss_pred             HHHHHHHHH----hhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCC-CchHHhhheec
Confidence            2 2233333    333445568999999999999999999999999999999 99999999765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.72  E-value=6.6e-16  Score=124.55  Aligned_cols=205  Identities=16%  Similarity=0.136  Sum_probs=151.3

Q ss_pred             hhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccchHHHHHHHHHHHHHHH
Q 025964            6 LWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININWIGVVYQMGGVVGEA   85 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~~~~~~a   85 (245)
                      -+...||...-.+-+++.-....|++.++++++++|||+++.|+++++++.+||........+.++..+.+    +++|+
T Consensus        86 W~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~  161 (293)
T COG2962          86 WWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFG  161 (293)
T ss_pred             HHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHH
Confidence            34444555565666677778899999999999999999999999999999999998877666677755444    55677


Q ss_pred             HHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 025964           86 LRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHT  165 (245)
Q Consensus        86 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  165 (245)
                      +|...-|+.      ++++.+-.......-....+......++............+.++.+.|..+..--.++..+-|+.
T Consensus       162 ~Ygl~RK~~------~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~l  235 (293)
T COG2962         162 LYGLLRKKL------KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRL  235 (293)
T ss_pred             HHHHHHHhc------CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence            776664433      46777777666544333333333333332210010112234567777877777767777889999


Q ss_pred             hhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhHh
Q 025964          166 SALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKEA  221 (245)
Q Consensus       166 ~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~~  221 (245)
                      +-.+.++..|.+|..-.+++++++||+ ++..++++.+.+..|..+|.....++.+
T Consensus       236 pls~~G~lqYi~Ptl~fllav~i~~E~-~~~~~~~~F~~IW~aL~l~~~d~l~~~r  290 (293)
T COG2962         236 PLSTLGFLQYIEPTLMFLLAVLIFGEP-FDSDQLVTFAFIWLALALFSIDGLYTAR  290 (293)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999 9999999999999999999887654433

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.71  E-value=2.3e-16  Score=119.70  Aligned_cols=141  Identities=33%  Similarity=0.517  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhc---CCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccc----c--c---cccc
Q 025964           73 GVVYQMGGVVGEALRLIFMEILVKRK---GLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL----E--T---WHFP  140 (245)
Q Consensus        73 G~~~~l~~~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~--~---~~~~  140 (245)
                      |.++++.+.++.|+++++.|+.++++   +.+.++.++++|..+.+.+.++|.+...|.+.....    .  +   ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999999873   357899999999999999999999888776653211    1  1   1133


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          141 PLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      +..+..+++.++..+.+.+..++++||.+.++.+.+|.+...+.|+++|||+ +|+.+++|..+.+.|..+|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~-~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEP-ITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCc-CCHHHHHHHHHHHHHHheeeC
Confidence            4568889999999999999999999999999999999999999999999999 999999999999999999874

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.71  E-value=2e-18  Score=136.75  Aligned_cols=204  Identities=17%  Similarity=0.120  Sum_probs=159.1

Q ss_pred             hhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee-----ccc---------cch
Q 025964            5 TLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY-----GEI---------NIN   70 (245)
Q Consensus         5 ~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~-----~~~---------~~~   70 (245)
                      ..++.++|++|++.+.+.++..++|.++.+++|.++|||.++...++..+.+.|++++.-     ++.         +.+
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~  189 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYD  189 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccccc
Confidence            456788999999999999999999999999999999999999999999999999998763     221         224


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHH
Q 025964           71 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC  150 (245)
Q Consensus        71 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                      ..|.+.++.+++..|--.++.|++-|+    .|....+.|..+++.+..++..........+.  -+.. ++++...|+.
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~----~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~--cgkd-r~l~~~lGvf  262 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKN----AHAIMSVSYFSLITLVVSLIGCASIGAVQLPH--CGKD-RWLFVNLGVF  262 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhcc----ccEEEEehHHHHHHHHHHHHHHhhccceecCc--cccc-eEEEEEehhh
Confidence            568888888888888888888877554    45566667777776666555443322222221  1111 1233444677


Q ss_pred             HHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          151 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       151 ~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ++..++.....+++-.|...++..+.+.+++.++.+++|||. ++++.|+|+++++.+..+....|
T Consensus       263 gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~-Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  263 GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHW-PTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCC-ChHHHhhceeeeehhHHHHHHHH
Confidence            888888888889998888899999999999999999999999 99999999999998877765443

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.68  E-value=7e-17  Score=128.55  Aligned_cols=210  Identities=19%  Similarity=0.243  Sum_probs=169.2

Q ss_pred             chhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec---ccc---------
Q 025964            2 FAMTLWLGNTAYLY-ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG---EIN---------   68 (245)
Q Consensus         2 ~~~~~~~~~~al~~-~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~---~~~---------   68 (245)
                      |-.....+|+++++ +|.+...++++-+++.+|..++++.|+|.+.+|+.++....+|+++....   |..         
T Consensus        74 FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~  153 (330)
T KOG1583|consen   74 FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSG  153 (330)
T ss_pred             eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccC
Confidence            34455678999998 79999999999999999999999999999999999999999999986542   210         


Q ss_pred             ---ch----HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccc------ccc
Q 025964           69 ---IN----WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMD------ALE  135 (245)
Q Consensus        69 ---~~----~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~  135 (245)
                         .+    .+|+.+..++.+..|...++++...++++  -|+-+.++|...++    +|..++..++..+      ..+
T Consensus       154 ~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG--Kh~~EalFytH~Ls----LP~Flf~~~div~~~~~~~~se  227 (330)
T KOG1583|consen  154 SAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG--KHWKEALFYTHFLS----LPLFLFMGDDIVSHWRLAFKSE  227 (330)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHhc----cchHHHhcchHHHHHHHHhcCc
Confidence               01    47999999999999999999999998865  48899999998776    3333332221110      000


Q ss_pred             ---------ccccchHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHH
Q 025964          136 ---------TWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAI  206 (245)
Q Consensus       136 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~  206 (245)
                               .....++.++++++.++++.-..+.+-.++++.+++++-.++..+++++++..|+.+ +++..|+|..+++
T Consensus       228 ~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Np-ft~~h~lGa~lVF  306 (330)
T KOG1583|consen  228 SYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENP-FTPWHWLGAALVF  306 (330)
T ss_pred             ceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCC-CCHHHHHHHHHHH
Confidence                     111234568888988988877777788899999999999999999999999999999 9999999999999


Q ss_pred             HHHHHhhcccch
Q 025964          207 AGVAAYNNHKLK  218 (245)
Q Consensus       207 ~gi~l~~~~~~~  218 (245)
                      .|-.+|.....+
T Consensus       307 ~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  307 FGTLLFANVWNH  318 (330)
T ss_pred             HHHHHHHHHHcC
Confidence            999999765443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.67  E-value=9.1e-17  Score=125.26  Aligned_cols=211  Identities=19%  Similarity=0.202  Sum_probs=167.7

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc-------ccchHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-------ININWIGVV   75 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~-------~~~~~~G~~   75 (245)
                      -+.+...|.++||+|-++..+-+++-||-+++++.++.|++.+++++..++.+++|+++..+.+       ...-..|-+
T Consensus        96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GEl  175 (337)
T KOG1580|consen   96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGEL  175 (337)
T ss_pred             HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHH
Confidence            3556778999999999999999999999999999999999999999999999999999887642       122357999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHh-hcccccccccc-cccchHHHHHHHHHHHH
Q 025964           76 YQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIF-LEKPKMDALET-WHFPPLMLTLNCLCTFA  153 (245)
Q Consensus        76 ~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  153 (245)
                      +.+++--..++....+.++...  +..+...++++.++.+.+.+....++ .|...+..... ....++-+.+.++++..
T Consensus       176 LL~lSL~mDGlTg~~Qdrira~--yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~L  253 (337)
T KOG1580|consen  176 LLILSLAMDGLTGSIQDRIRAS--YQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCL  253 (337)
T ss_pred             HHHHHHHhcccchhHHHHHHHh--hccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHh
Confidence            9999998888888888887543  34577888899988888776665443 22222211100 01112335555677777


Q ss_pred             HHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          154 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       154 ~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .+.+.+..+...+|.+-+++...+..++++.++++|+.+ ++..||+|..+++.+...-....
T Consensus       254 GQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~np-ls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  254 GQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNP-LSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             hhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHHhhhHhhcC
Confidence            778888899999999999999999999999999999999 99999999999999987755443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.66  E-value=3.2e-16  Score=121.28  Aligned_cols=212  Identities=16%  Similarity=0.228  Sum_probs=179.9

Q ss_pred             hhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccccch-------HHHHHHHH
Q 025964            6 LWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEININ-------WIGVVYQM   78 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~-------~~G~~~~l   78 (245)
                      .....-++||.+++.+++.+.++.+.++..+.+++|.|.+.....+.++++..-+...++|.+..       -.|.+|+.
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~  161 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMF  161 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEe
Confidence            44566799999999999999999999999999999999999999999999999999888876422       25899999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccccc--ccccchHHHHHHHHHHHHHHH
Q 025964           79 GGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALE--TWHFPPLMLTLNCLCTFALNL  156 (245)
Q Consensus        79 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  156 (245)
                      ...++.|.+....|+..|-.  +....+.++|..+++..++....+..|+.......  ........+..+++++++..+
T Consensus       162 ~NclssaafVL~mrkri~lt--Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         162 TNCLSSAAFVLIMRKRIKLT--NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             hhhHhHHHHHHHHHHhhccc--ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhh
Confidence            99999999999988876642  45778999999999988888888877766543211  111223467889999999999


Q ss_pred             HHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhH
Q 025964          157 SVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKE  220 (245)
Q Consensus       157 ~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~  220 (245)
                      +.-|+++-++.++.++++.++.....+.|.++|||+ .+...+..+.+-..+..+|...+.+++
T Consensus       240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap-~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAP-VNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999 999999999999988899988765443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.66  E-value=5e-15  Score=119.74  Aligned_cols=211  Identities=21%  Similarity=0.243  Sum_probs=169.8

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc---------cchHHHH
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI---------NINWIGV   74 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~   74 (245)
                      .+-.+++.|++|++-+...+.+++--+-+++.+.++.|+|.+.++++...+..+|+.+....+.         ..+++|+
T Consensus        95 ~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~  174 (327)
T KOG1581|consen   95 LSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGI  174 (327)
T ss_pred             cchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhH
Confidence            4567889999999999999999999999999999999999999999999999999987764311         2458999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc--ccccc-cchHHHHHHHHHH
Q 025964           75 VYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA--LETWH-FPPLMLTLNCLCT  151 (245)
Q Consensus        75 ~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~  151 (245)
                      .+....-+..++.+..++++.++  .+.++++++++.+++.++.-... +...+...+.  ...-+ ..++=+.+-+.++
T Consensus       175 ~Ll~~~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~g  251 (327)
T KOG1581|consen  175 LLLFGYLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCG  251 (327)
T ss_pred             HHHHHHHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhh
Confidence            99999999999999999999984  47999999999999987765554 2222211111  00000 1112244445666


Q ss_pred             HHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccch
Q 025964          152 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK  218 (245)
Q Consensus       152 ~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~  218 (245)
                      ...+.+.+..+++.++.+.+.+...+..+++.++.++||.+ +++.|++|..+++.|+.+-...+++
T Consensus       252 avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~-~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  252 AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHP-LSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCc-cchhhccCeeeehHHHHHHHHHHHh
Confidence            66777788899999999999999999999999999999999 9999999999999999886655444

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.63  E-value=1.5e-14  Score=115.69  Aligned_cols=207  Identities=16%  Similarity=0.181  Sum_probs=162.5

Q ss_pred             hhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc----------cchHHHHH
Q 025964            6 LWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI----------NINWIGVV   75 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~----------~~~~~G~~   75 (245)
                      ..+.+.++.+++++.+|+++....+|+.+++.-+++++++.+||+++....+|++++...|.          +.-..|++
T Consensus       100 sslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdl  179 (372)
T KOG3912|consen  100 SSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDL  179 (372)
T ss_pred             hHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhH
Confidence            34678999999999999999999999999999999999999999999999999998765432          22368999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc----ccccc--ccccccc----------
Q 025964           76 YQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE----KPKMD--ALETWHF----------  139 (245)
Q Consensus        76 ~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~--~~~~~~~----------  139 (245)
                      +.+.+.+.-|.+.++.+|..++.  +++|.+.+.|..+++..++........    +..++  +...+..          
T Consensus       180 lIiiaqiivaiQ~v~Eek~l~~~--nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e  257 (372)
T KOG3912|consen  180 LIIIAQIIVAIQMVCEEKQLKKS--NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQE  257 (372)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhc--cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcC
Confidence            99999999999999999998874  699999999999988554433332211    11111  1111111          


Q ss_pred             -chHHHHHHH--HHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          140 -PPLMLTLNC--LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       140 -~~~~~~~~~--~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                       +...+.+.+  +.-.+.|+.....-|..|+++-.+...++..+..++++.+..|. +...|+.|..+.+.|+.+|+..
T Consensus       258 ~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~-f~llqilGFliLi~Gi~lY~~i  335 (372)
T KOG3912|consen  258 SPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEY-FHLLQILGFLILIMGIILYNQI  335 (372)
T ss_pred             CchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence             111122222  22223466667778999999999999999999999999999999 9999999999999999999854

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.63  E-value=7.3e-14  Score=115.83  Aligned_cols=208  Identities=14%  Similarity=0.108  Sum_probs=156.0

Q ss_pred             hhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc-----------ccchHHH
Q 025964            5 TLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE-----------ININWIG   73 (245)
Q Consensus         5 ~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~-----------~~~~~~G   73 (245)
                      .--+.+.++.+.+++++++...+-.+.|+++.++++|||++++||.++++.++|+.++..+.           .+..+.|
T Consensus       105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G  184 (345)
T KOG2234|consen  105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLG  184 (345)
T ss_pred             hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhh
Confidence            33467789999999999999999999999999999999999999999999999999876211           1234789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccccc---ccccccchH-HHHHHHH
Q 025964           74 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDA---LETWHFPPL-MLTLNCL  149 (245)
Q Consensus        74 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~  149 (245)
                      ....+.+.++.++..++.++.+|+.  +.+.+-.......++.++.+...+..++.....   ...|....| .++..++
T Consensus       185 ~~avl~~c~~SgfAgvYfEkiLK~s--~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~  262 (345)
T KOG2234|consen  185 LVAVLVACFLSGFAGVYFEKILKGS--NVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAV  262 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhc
Confidence            9999999999999999999999864  345555555555555555454444434333221   112222222 3444444


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchh
Q 025964          150 CTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK  219 (245)
Q Consensus       150 ~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~  219 (245)
                      .+..    .-..+|+.+-..-+....+..+++.+.++.+||-+ +|....+|..+++.++.+|+..+.+.
T Consensus       263 gGLl----vs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~-~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  263 GGLL----VSLVMKYADNILKGFSTSVAIILTTVASIALFDFQ-LTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             cchh----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCC-chHHHHHHHHHHHHHHHHhhcCCccc
Confidence            4443    33446788877778888888899999999999999 99999999999999999999655443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.59  E-value=3.3e-14  Score=112.21  Aligned_cols=198  Identities=14%  Similarity=0.044  Sum_probs=146.6

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec---cccchHHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG---EININWIGVVYQMG   79 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~---~~~~~~~G~~~~l~   79 (245)
                      ++...+.+.+++.+|.+.+..+.++.|+.++.++    .+|  .++.+.+.+.+.|+.+..-.   ..+.|+.|..+++.
T Consensus        82 g~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~  155 (292)
T COG5006          82 GGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALG  155 (292)
T ss_pred             HHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHH
Confidence            3455667789999999999999999999998775    233  34555666777888765432   24578999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHH-HHHHHH
Q 025964           80 GVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF-ALNLSV  158 (245)
Q Consensus        80 ~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  158 (245)
                      ++.||+.|.+..||.-+.    .|..+-+...+.+++++.+|......++...+   +.. ....+..+++.. .-+..-
T Consensus       156 AG~~Wa~YIv~G~r~g~~----~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~---p~l-l~laLgvavlSSalPYsLE  227 (292)
T COG5006         156 AGACWALYIVLGQRAGRA----EHGTAGVAVGMLVAALIVLPIGAAQAGPALFS---PSL-LPLALGVAVLSSALPYSLE  227 (292)
T ss_pred             HhHHHHHHHHHcchhccc----CCCchHHHHHHHHHHHHHhhhhhhhcchhhcC---hHH-HHHHHHHHHHhcccchHHH
Confidence            999999999999988753    35566777778888888788765433332221   111 112222223322 224445


Q ss_pred             HHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          159 FLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       159 ~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      ..++++.++.+.+....+||.++.+.|++++||. +|+.||+|+..++.+..-....
T Consensus       228 miAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG~~lt  283 (292)
T COG5006         228 MIALRRLPARTFGTLLSLEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAGSTLT  283 (292)
T ss_pred             HHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhccccc
Confidence            6679999999999999999999999999999999 9999999999999987754443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.56  E-value=2.4e-14  Score=114.00  Aligned_cols=209  Identities=19%  Similarity=0.185  Sum_probs=172.4

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc----ccchHHHHHHHHH
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE----ININWIGVVYQMG   79 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~----~~~~~~G~~~~l~   79 (245)
                      |++.+.|-++.|.+-+.-.+.+++--+-+++-+.++.++|..++.+.+..++..|+++....|    ++++..|+.+.-.
T Consensus       118 gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsg  197 (367)
T KOG1582|consen  118 GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISG  197 (367)
T ss_pred             hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHH
Confidence            677889999999999999999999988899999999999999999999999999999987765    5678899999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhh-ccccccc---ccccccchHHHHHHHHHHHHHH
Q 025964           80 GVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFL-EKPKMDA---LETWHFPPLMLTLNCLCTFALN  155 (245)
Q Consensus        80 ~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  155 (245)
                      +-++.|+-...+++.++..+  -+..++++|...++...++.+.... |......   ..++. .....++-...+++..
T Consensus       198 ALl~DA~iGNvQEk~m~~~~--~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~-tyGy~~~~s~~gylG~  274 (367)
T KOG1582|consen  198 ALLADAVIGNVQEKAMKMNP--ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVR-TYGYAFLFSLAGYLGI  274 (367)
T ss_pred             HHHHHHHhhHHHHHHHhhCC--CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHh-HHHHHHHHHHHhHhhH
Confidence            99999999999999988764  4678999999999888877776542 3221111   11221 1223444455666666


Q ss_pred             HHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          156 LSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       156 ~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .+....++..+|.+++.+...+..+++++++++|..| +|....-|..+++.|+.+....+
T Consensus       275 ~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKP-fT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  275 VFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKP-FTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCc-hHHHHhhhhHHHHHHHHhhcccC
Confidence            6677889999999999999999999999999999999 99999999999999999877655

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.48  E-value=2.1e-14  Score=113.41  Aligned_cols=201  Identities=17%  Similarity=0.206  Sum_probs=156.1

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecc--------ccchHHHHHHHHHHHH
Q 025964           11 TAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGE--------ININWIGVVYQMGGVV   82 (245)
Q Consensus        11 ~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~--------~~~~~~G~~~~l~~~~   82 (245)
                      .|.||++....+.+..-..+.+.+++|+++|.|.++.|..++.++..|+++++..|        .+....|+.+.+.++-
T Consensus        97 ~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GAT  176 (336)
T KOG2766|consen   97 KAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGAT  176 (336)
T ss_pred             eehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecce
Confidence            48899999999999999999999999999999999999999999999999887654        2334789999999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 025964           83 GEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVI  162 (245)
Q Consensus        83 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  162 (245)
                      +||..++..+.+.|+    .+..+++....++++++..+- +..|..+... ..|.+.....+....+.+..+...-..+
T Consensus       177 lYaVSNv~EEflvkn----~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t-l~w~~~i~~yl~f~L~MFllYsl~pil~  250 (336)
T KOG2766|consen  177 LYAVSNVSEEFLVKN----ADRVELMGFLGLFGAIISAIQ-FIFERHHVST-LHWDSAIFLYLRFALTMFLLYSLAPILI  250 (336)
T ss_pred             eeeeccccHHHHHhc----CcHHHHHHHHHHHHHHHHHHH-Hhhhccceee-EeehHHHHHHHHHHHHHHHHHHhhHHhe
Confidence            999999999998874    689999999999998887776 4445444322 1222222222234444555555555667


Q ss_pred             hhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchhH
Q 025964          163 SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKKE  220 (245)
Q Consensus       163 ~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~~  220 (245)
                      |..+++..++-.......+++.  ..||-+ .+|..++....+..|.++|..+++.+.
T Consensus       251 k~~~aT~~nlslLTsDmwsl~i--~~FgYh-v~wLY~laF~~i~~GliiYs~re~~~~  305 (336)
T KOG2766|consen  251 KTNSATMFNLSLLTSDMWSLLI--RTFGYH-VDWLYFLAFATIATGLIIYSTREKDEE  305 (336)
T ss_pred             ecCCceEEEhhHhHHHHHHHHH--HHHhcc-hhhhhHHHHHHHHHhhEEeeccccCcH
Confidence            8888877776666666777766  788999 999999999999999999976554433

>TIGR00803 nst UDP-galactose transporter

Probab=99.38  E-value=4.6e-12  Score=102.07  Aligned_cols=191  Identities=14%  Similarity=0.129  Sum_probs=128.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec-------------------cc--------c
Q 025964           16 ISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG-------------------EI--------N   68 (245)
Q Consensus        16 ~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~-------------------~~--------~   68 (245)
                      ++++.....++..++++++.++.+.+||.+..|+++.++...|+......                   +.        .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            46777888999999999999999999999999999999999998742111                   11        2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccc---cccccchHHHH
Q 025964           69 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDAL---ETWHFPPLMLT  145 (245)
Q Consensus        69 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~  145 (245)
                      ..+.|....+.+..+.++..++.++..|+++  .+.+.........+.+.........+.......   ..+....+.. 
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  158 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD--TMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIV-  158 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC--CchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHH-
Confidence            3467777788888888888888888765432  222222222222222211111111111111111   1111112222 


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHh
Q 025964          146 LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY  212 (245)
Q Consensus       146 ~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~  212 (245)
                        .+.....+.+..+.+|+.++.+.++...++++++.++++++|||+ ++..++.|+.+++.|+.+|
T Consensus       159 --~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       159 --GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             --HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEeC
Confidence              222333344567789999999999999999999999999999999 9999999999999987765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.32  E-value=1.3e-11  Score=89.86  Aligned_cols=125  Identities=18%  Similarity=0.225  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHH
Q 025964           82 VGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLV  161 (245)
Q Consensus        82 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (245)
                      ++||.+.++.|+..++    .|+....++....+.+ +++.....+..+. ...+..........+.+.....+..++++
T Consensus         1 ~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   74 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK----ISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYA   74 (126)
T ss_pred             ceeeeHHHHHHHHhcc----CCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHH
Confidence            4688899999988764    7999999999999887 5555544443321 11112222233444444456667778899


Q ss_pred             HhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          162 ISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       162 i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      +++.++..++.+.+++|+++.++++++++|+ +++.+++|+.+++.|+.+..
T Consensus        75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   75 LKYISASIVSILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 99999999999999998753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.28  E-value=3.9e-11  Score=85.23  Aligned_cols=134  Identities=17%  Similarity=0.156  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHH
Q 025964           74 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA  153 (245)
Q Consensus        74 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (245)
                      .++++++++.+++..++.|.-.++    .||...++...++..+.+.............. +-....+..++++|+.+..
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~----vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~-~~~~k~~lflilSGla~gl   79 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEG----VDPDFATTIRTIVILIFLLIVLLVTGNWQAGG-EIGPKSWLFLILSGLAGGL   79 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc----cCccHHHHHHHHHHHHHHHHHHHhcCceeccc-ccCcceehhhhHHHHHHHH
Confidence            579999999999999999877653    67777777777776666555544433222221 1111224557788888888


Q ss_pred             HHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          154 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       154 ~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      .+.++|+++|.-.+..+..+.-..|++++++++++++|+ +|..+++|+.++..|..+..
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeEe
Confidence            899999999999999999999999999999999999999 99999999999999987643

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.05  E-value=6.2e-09  Score=87.50  Aligned_cols=139  Identities=9%  Similarity=0.107  Sum_probs=106.1

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc-c-cccccccchHHHH
Q 025964           68 NINWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM-D-ALETWHFPPLMLT  145 (245)
Q Consensus        68 ~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~  145 (245)
                      +....|+.+++++++.|+...++.|.. .    +.++.++.+++..++.+++.+.......... . ...++. ......
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~   77 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQ-KIFMLA   77 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHH-HHHHHH
Confidence            344689999999999999999999754 2    3799999999999988776665433221110 0 000111 112233


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          146 LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       146 ~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      .+++.....+.+++++++++++..+++..+..|++..++++++++|+ ++..+++|+++.+.|+.+..
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~-~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGER-FRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHHHH
Confidence            44555555677889999999999999999999999999999999999 99999999999999998754

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.05  E-value=1.3e-08  Score=78.09  Aligned_cols=206  Identities=16%  Similarity=0.118  Sum_probs=141.3

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeeccc--cchHHHHHHHHHH
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEI--NINWIGVVYQMGG   80 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~--~~~~~G~~~~l~~   80 (245)
                      .+.-..+..+++.++++.++.+..+.-.++.+++++.+|+|+...++++.++++.|++++.+.|.  ..+++|+.+++.+
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~e~iGi~~AV~S  143 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHADEIIGIACAVGS  143 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhhhhhhHHHHHHH
Confidence            44555677899999999999999999999999999999999999999999999999999998654  4679999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHH----HHHHHHH-hhcc-cccccccccccchHHHHHHHHHHHHH
Q 025964           81 VVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSAL----CLFIPWI-FLEK-PKMDALETWHFPPLMLTLNCLCTFAL  154 (245)
Q Consensus        81 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (245)
                      +...|+|-+.-|+......  ...  ...+.+.++..    ..+|+.. ...+ .++....-  .+|.-+..........
T Consensus       144 A~~aAlYKV~FK~~iGnAn--~Gd--aa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~--~PWG~l~G~A~L~lAF  217 (290)
T KOG4314|consen  144 AFMAALYKVLFKMFIGNAN--FGD--AAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAA--APWGCLCGAAGLSLAF  217 (290)
T ss_pred             HHHHHHHHHHHHHHhccCc--chh--HHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhh--CCchhhhhHHHHHHHH
Confidence            9999999999988876432  211  11111212211    1222221 1111 11111111  1122222223334444


Q ss_pred             HHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          155 NLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       155 ~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      ++.....+..+.|...++-...........+.+ ++|-+.+.....|-.+++.|..+.-..
T Consensus       218 N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL-~q~l~~ntl~La~T~iI~i~FiLiiiP  277 (290)
T KOG4314|consen  218 NFLINFGIALLNPILISIGMLCGIPGNAAIDIL-FQELEFNTLFLAATCIICIGFILIIIP  277 (290)
T ss_pred             hhheeehhhhhchhhheehheecCcchhHHHHH-HHHHHHHHHHHHHHHHHHHhHHheecc
Confidence            555666677888888887777766667777664 455448888999999999998876543

>TIGR00688 rarD rarD protein

Probab=99.05  E-value=8.1e-09  Score=84.94  Aligned_cols=136  Identities=13%  Similarity=0.081  Sum_probs=104.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccccc--c--cccccccchHHHHHH
Q 025964           72 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKM--D--ALETWHFPPLMLTLN  147 (245)
Q Consensus        72 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~  147 (245)
                      .|..+.++++++|+...+..|.. .    +.++.++.++...++.+.+.+..........  .  ...............
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence            37899999999999999999863 2    3799999999999988776665433221110  0  001111112334555


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          148 CLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       148 ~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      ++.....+.+++.+++++++.++++..+..|+++.++++++++|+ ++..+++|..+.+.|+.+..
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek-~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKER-ISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHH
Confidence            555666677888999999999999999999999999999999999 99999999999999987653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.96  E-value=4.5e-08  Score=79.87  Aligned_cols=197  Identities=15%  Similarity=0.096  Sum_probs=142.5

Q ss_pred             chhhhhhhhhhhhccchhHHHHHH-HHHHHHHHHHHHHHcccccchhhHH----HHHHhhhhceeeeecccc--------
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLL----IMSVISFGVVVASYGEIN--------   68 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~-~~~pi~~~~~~~~~~~e~~~~~~~~----~~~~~~~Gv~l~~~~~~~--------   68 (245)
                      ++..+...+.|+++++++...-+. .+.-+.+.+++.++++|.-+..+++    ++++.++|+.+....|.+        
T Consensus        55 W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~  134 (269)
T PF06800_consen   55 WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKS  134 (269)
T ss_pred             HHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccccccccc
Confidence            456677788888888888766554 5677889999999999998877765    888888999887764321        


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHH
Q 025964           69 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC  148 (245)
Q Consensus        69 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      ....|+...+++.+.|..|.+..|..      +.+++...+=+++-..+..+...... .....+     ...+.-.++|
T Consensus       135 ~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~~-----k~~~~nil~G  202 (269)
T PF06800_consen  135 NMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFFE-----KKSWKNILTG  202 (269)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHHHHHHHHHHHhhcc-cccccc-----cchHHhhHHH
Confidence            22569999999999999999887652      46888887766544333322222222 111111     1123345666


Q ss_pred             HHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccch----hhhhhHHHHHHHHHH
Q 025964          149 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTI----INLFGYGIAIAGVAA  211 (245)
Q Consensus       149 ~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~----~~~~G~~li~~gi~l  211 (245)
                      +.--..+.+++...++.+..+.=.++.+..+++.+.|++++||+| +.    ..++|.++++.|..+
T Consensus       203 ~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~K-t~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  203 LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKK-TKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecC-chhhHHHHHHHHHHHHHhhhc
Confidence            666667777888889999999999999999999999999999994 54    366788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.94  E-value=2.9e-08  Score=82.86  Aligned_cols=132  Identities=11%  Similarity=0.105  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhc-ccccccccccccchHHHHHHHHHHH
Q 025964           74 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLE-KPKMDALETWHFPPLMLTLNCLCTF  152 (245)
Q Consensus        74 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  152 (245)
                      .++.+.+++++|...+..|+..+++    ++.  ..+.....++.+.|...... ....... . ...+......++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~----~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE----PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRL-P-ATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch----hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCc-c-hhhHHHHHHHHHHHH
Confidence            4688999999999999999776542    333  35555555666666544321 1111111 1 111234555666666


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      ....+.+.++++.++..++.+.+..|+++.+++++++||+ ++..+++|+.+++.|+.+...
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhc
Confidence            7777788899999999999999999999999999999999 999999999999999987653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.88  E-value=5.6e-08  Score=83.58  Aligned_cols=136  Identities=8%  Similarity=0.088  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHH
Q 025964           74 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA  153 (245)
Q Consensus        74 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (245)
                      ...++...++|+.+.++.|..++.   ..++....++...++++++++.....+.........+.. +..+.+.++++..
T Consensus        15 ~~~~~~~q~~~~~~~~~~k~a~~~---G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~-~~~l~l~g~~g~~   90 (358)
T PLN00411         15 LTAMLATETSVVGISTLFKVATSK---GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI-LSKIGLLGFLGSM   90 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHC---CCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH-HHHHHHHHHHHHH
Confidence            456777788999999999999865   589999999999999988888766543221111112222 1223333444444


Q ss_pred             HHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhh------ccccccchhhhhhHHHHHHHHHHhhc
Q 025964          154 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALL------FADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       154 ~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~------~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      .+.+.+.+++++++..++++.+..|+++.++++++      ++|+ ++..+++|.++.+.|+.+...
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er-~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKER-SSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhccc-ccHHHHHHHHHHHHHHHHHHH
Confidence            45567888999999999999999999999999999      6999 999999999999999987553

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.74  E-value=1.5e-08  Score=72.86  Aligned_cols=64  Identities=20%  Similarity=0.253  Sum_probs=58.7

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeecccc
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYGEIN   68 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~   68 (245)
                      ....+.++|+++.| +....+.++.|+++++++++++|||++++++.+++++++|++++..+|.+
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            56778899999999 58889999999999999999999999999999999999999998876644

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.59  E-value=8.1e-07  Score=73.04  Aligned_cols=118  Identities=12%  Similarity=0.047  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 025964           85 ALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISH  164 (245)
Q Consensus        85 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  164 (245)
                      +...+..|...++   ..++....++....+.+.+.+.....     .+..+   .......+++.....+.+.+.++++
T Consensus         2 g~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~---~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         2 GTTGVVIGQYLEG---QVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKR---LLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             cchHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhH---HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445556665543   36889999999988877766654322     11111   1234555555556667778899999


Q ss_pred             chhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          165 TSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       165 ~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      +++..++++..+.|+++.+++.++++|+ +++.+++|+.+.+.|+.+...
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~-~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKER-PRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHhhcc
Confidence            9999999999999999999999999999 999999999999999988653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.52  E-value=6.7e-06  Score=60.21  Aligned_cols=120  Identities=14%  Similarity=0.066  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHH
Q 025964           72 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT  151 (245)
Q Consensus        72 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      .|.++.+.+.++.+...++.|+-.++.+. .+...   ..  ..    .... . ..       +    ...+..+.++.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~---~~--~~----~~~~-~-~~-------p----~~~i~lgl~~~   58 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAW---DF--IA----ALLA-F-GL-------A----LRAVLLGLAGY   58 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchh---HH--HH----HHHH-H-hc-------c----HHHHHHHHHHH
Confidence            47788999999999999999887765431 11111   00  00    0000 0 00       0    01223333334


Q ss_pred             HHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhh--hccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          152 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSAL--LFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       152 ~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~--~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      .....++..++++.+...+..+..+.++...+.++.  +|||+ +|+.+++|+.+++.|+.+.+..
T Consensus        59 ~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~-ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         59 ALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNET-FSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhccC
Confidence            444556778899999999998888888888888875  89999 9999999999999999997653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.47  E-value=6.7e-06  Score=69.12  Aligned_cols=130  Identities=15%  Similarity=0.189  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHH
Q 025964           72 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT  151 (245)
Q Consensus        72 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      .++++++.+.++|+......|...+    +.+|.....+...++++++.+..   ..+..   ....  ......+++..
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~----~~~P~~~~~~R~~~a~l~l~~~~---~~~~~---~~~~--~~~~~~~~l~~   71 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSE----SLGPVGGAAMIYSVSGLLLLLTV---GFPRL---RQFP--KRYLLAGGLLF   71 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHc----cCChHHHHHHHHHHHHHHHHHHc---ccccc---cccc--HHHHHHHhHHH
Confidence            3567889999999999999987765    37999999999888887766542   11111   1111  11223333332


Q ss_pred             HHHHHHHHHHH----hhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          152 FALNLSVFLVI----SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       152 ~~~~~~~~~~i----~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      .....+.+...    +..++.+++++.++.|+++.++++++++|+ ++..+++|+++.+.|+.+...
T Consensus        72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~  137 (295)
T PRK11689         72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLG  137 (295)
T ss_pred             HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheec
Confidence            23333333444    346778889999999999999999999999 999999999999999987654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.46  E-value=1e-05  Score=69.59  Aligned_cols=125  Identities=13%  Similarity=0.149  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHhhhcCCCCC-HHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 025964           84 EALRLIFMEILVKRKGLKLN-PISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVI  162 (245)
Q Consensus        84 ~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  162 (245)
                      ...++...|...++    .+ |+.+..++..++.+...+..... ....+...++...+..++..++++...+...+.++
T Consensus        61 s~~~~~~nK~vl~~----~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl  135 (350)
T PTZ00343         61 NVLYVVDNKLALNM----LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISM  135 (350)
T ss_pred             HHHHHHHHHHHHHh----CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456677777764    56 99999999998877655443321 11111111111122234455555555555566789


Q ss_pred             hhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          163 SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       163 ~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      +++++..+.++..++|+++++++.++++|+ ++..++.|.++++.|+.+...
T Consensus       136 ~~~svs~~~iika~~Pvft~lls~~~l~ek-~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        136 GLGAVSFTHVVKAAEPVFTALLSILFLKQF-LNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             hhccHHHHHHHHHhhHHHHHHHHHHHhCCC-ccHHHHHHHHHHHHHHHheec
Confidence            999999999999999999999999999999 999999999999999988764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.44  E-value=1e-05  Score=67.84  Aligned_cols=130  Identities=15%  Similarity=0.103  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHH
Q 025964           75 VYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFAL  154 (245)
Q Consensus        75 ~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (245)
                      ...+.-.+.|+...+..|...+    +.+|...+++...++++.+++...... .......++   ......+.+.....
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~----~~~p~~~~~~R~~~a~l~ll~~~~~~~-~~~~~~~~~---~~~~~~g~~~~~~~   82 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVE----SWPPLMMAGVRFLIAGILLLAFLLLRG-HPLPTLRQW---LNAALIGLLLLAVG   82 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHHHHhC-CCCCcHHHH---HHHHHHHHHHHHHH
Confidence            4556667889999999987654    479999999999999888777654322 111111111   11222222222233


Q ss_pred             HHHHHHHH-hhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          155 NLSVFLVI-SHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       155 ~~~~~~~i-~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      ..+.+.+. ++.++..+++..++.|+++.+++.+ ++|+ ++..+++|..+.+.|+.+...
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~  141 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNS  141 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhc
Confidence            34445566 8899999999999999999999985 7999 999999999999999988754

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.44  E-value=1.1e-05  Score=67.91  Aligned_cols=124  Identities=18%  Similarity=0.154  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHH-H
Q 025964           75 VYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF-A  153 (245)
Q Consensus        75 ~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  153 (245)
                      ++.++++++|+...+..|...+    +.+|....++...++++.+.+...   .+..    .+    ......++... .
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~----~~~p~~~~~~R~~~a~~~l~~~~~---~~~~----~~----~~~~~~g~~~~~~   71 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH----NMPPLMLAGLRFMLVAFPAIFFVA---RPKV----PL----NLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHhc---CCCC----ch----HHHHHHHHHHHHH
Confidence            5678889999999999987764    379999999998887665544321   1111    11    11122233222 2


Q ss_pred             HHHHHHHHHhh-chhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          154 LNLSVFLVISH-TSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       154 ~~~~~~~~i~~-~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      .....+...++ .++..++++..+.|+++.++++++++|+ ++..+++|.++.+.|+.+...
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~  132 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIE  132 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhcc
Confidence            22344556666 5778889999999999999999999999 999999999999999887653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.43  E-value=3.9e-07  Score=65.06  Aligned_cols=62  Identities=19%  Similarity=0.097  Sum_probs=57.4

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeee
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVAS   63 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~   63 (245)
                      |+.++.+...+++..|++.+..+.++.++++++++++++|||++.+|++++.++++|++++.
T Consensus        47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            45677888889999999999999999999999999999999999999999999999998764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.39  E-value=4.4e-07  Score=65.73  Aligned_cols=60  Identities=32%  Similarity=0.310  Sum_probs=56.3

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceee
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA   62 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~   62 (245)
                      +....+.+.++++.+++..+.+..+.|+++++++++++|||+++++++++.+++.|++++
T Consensus        65 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   65 ALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             ehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.36  E-value=5.4e-06  Score=59.43  Aligned_cols=70  Identities=20%  Similarity=0.198  Sum_probs=58.3

Q ss_pred             HHHHHHHH-HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          145 TLNCLCTF-ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       145 ~~~~~~~~-~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ...+++.. ..+..++.+.++.++ .++....+.|+++.+++.++++|+ ++..+++|..++..|+.+....+
T Consensus        38 ~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er-~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   38 ILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKER-LSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhhhh
Confidence            33344443 556667788899885 788999999999999999999999 99999999999999999887654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.32  E-value=1.6e-06  Score=72.72  Aligned_cols=62  Identities=18%  Similarity=0.085  Sum_probs=56.4

Q ss_pred             hhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964            3 AMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus         3 ~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      ..+......|+.+.|.+..+-+.+..-++.++++..++|||++++.+.|..++++|..++..
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            44556788899999999999999999999999999999999999999999999999987653

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.26  E-value=2e-05  Score=64.34  Aligned_cols=140  Identities=16%  Similarity=0.151  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccc-cccccccccchHHHHHHHH
Q 025964           71 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPK-MDALETWHFPPLMLTLNCL  149 (245)
Q Consensus        71 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  149 (245)
                      ..|+++++.+-+.|+....+.|.+.     +.++.++..+..+.+............+.. ..+.......+....+++.
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~-----~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLE-----PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence            4699999999999999998887663     368999999998887776555544332221 1110111112233444444


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          150 CTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       150 ~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .-..-...+.++..+-....++.-.+++|.+.+++|.++++|+ ++..|++...+...|+..-.+..
T Consensus        81 li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkEr-ls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          81 LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKER-LSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHc
Confidence            4444444556788888999999999999999999999999999 99999999999999998766543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.25  E-value=5e-05  Score=63.99  Aligned_cols=120  Identities=13%  Similarity=0.076  Sum_probs=83.9

Q ss_pred             HHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhch
Q 025964           87 RLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTS  166 (245)
Q Consensus        87 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  166 (245)
                      ++++.|...++-   ..|..+.+++...+.+.+.+..... ...... .+.. .+..+...+++......+.+.++++++
T Consensus        17 ~~~~NK~~l~~~---~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~l~~~s   90 (302)
T TIGR00817        17 FNIYNKKLLNVF---PYPYFKTLISLAVGSLYCLLSWSSG-LPKRLK-ISSA-LLKLLLPVAIVHTIGHVTSNVSLSKVA   90 (302)
T ss_pred             HHHHHHHHHhhC---ChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            445567776531   4688888888877766654442111 111111 1111 122233344444555567788899999


Q ss_pred             hHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          167 ALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       167 a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      +..++++..+.|+++.+++.++++|+ ++..++.|..+.+.|+.+..
T Consensus        91 ~s~~~li~~~~Pv~~~ll~~~~~~e~-~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        91 VSFTHTIKAMEPFFSVVLSAFFLGQE-FPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHHHhcchHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999 99999999999999997654

specificities overlap.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.21  E-value=2.5e-05  Score=65.46  Aligned_cols=132  Identities=14%  Similarity=-0.006  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHH
Q 025964           73 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF  152 (245)
Q Consensus        73 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (245)
                      |++++++++++|+...+..|+..     +.++.+..  ...++.+++.........+..    +....+.....+|+.-.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-----g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~----~~~~~~~~g~l~G~~w~   70 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-----GGPYSQTL--GTTFGALILSIAIAIFVLPEF----WALSIFLVGLLSGAFWA   70 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-----CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc----cccHHHHHHHHHHHHHH
Confidence            57899999999999999998764     24555554  244444444433333222211    11112233455555555


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhh-hhhhhhhhhhhhhccccccchhh----hhhHHHHHHHHHHhhccc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLTIIN----LFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~-~~pv~~~~~~~~~~~e~~~~~~~----~~G~~li~~gi~l~~~~~  216 (245)
                      ..+++++.++++.+...+-.+.+ +.++.+.+++.++|||+ .+..+    ++|.++++.|+.+....+
T Consensus        71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEecc
Confidence            66788999999999998877777 88899999999999999 99999    999999999998875543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.20  E-value=5.7e-05  Score=63.72  Aligned_cols=128  Identities=13%  Similarity=0.042  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHhh
Q 025964           85 ALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISH  164 (245)
Q Consensus        85 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  164 (245)
                      ..+.+.++++.++...+..+..+++.+.....+...+...... .......+    +.-....+++........+.++++
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~al~~   87 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKSRKIP----LKKYAILSFLFFLASVLSNAALKY   87 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCCCcCh----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3455678888876543325777888887776665555433322 11111111    222333455666666778888999


Q ss_pred             chhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccch
Q 025964          165 TSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK  218 (245)
Q Consensus       165 ~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~  218 (245)
                      ++..+..+....+|+..++++.++++++ .+..+++++.++..|+.+....+.+
T Consensus        88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~-y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   88 ISYPTQIVFKSSKPIPVMILGVLILGKR-YSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             CChHHHHHHhhhHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHhhHheeeecccc
Confidence            9999999999999999999999999999 9999999999999999998876543

; GO: 0055085 transmembrane transport

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.14  E-value=0.00011  Score=52.52  Aligned_cols=58  Identities=14%  Similarity=0.107  Sum_probs=51.6

Q ss_pred             HHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          155 NLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       155 ~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      ..++..++++.+...+-..-.+.++.+.++|+++|||+ +++.+++|..+++.|+....
T Consensus        51 ~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~-ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         51 MVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEP-VSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHh
Confidence            34456778999999988888899999999999999999 99999999999999987653

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.10  E-value=0.00028  Score=58.51  Aligned_cols=139  Identities=22%  Similarity=0.129  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccc-ccccccccccchHHHHHHHH
Q 025964           71 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP-KMDALETWHFPPLMLTLNCL  149 (245)
Q Consensus        71 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  149 (245)
                      ..+....+..++.|+......|....+   ..+.....+.....+.+...+... .+.. ......   ...+.....++
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~   78 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRPALR---PWLLLLLLALL   78 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHHHHHHH-hhccccccccc---chHHHHHHHHH
Confidence            456778888888999988887776543   245566666566555544222221 1110 111111   11234455555


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhh-hhccccccchhhhhhHHHHHHHHHHhhcccc
Q 025964          150 CTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSA-LLFADTKLTIINLFGYGIAIAGVAAYNNHKL  217 (245)
Q Consensus       150 ~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~-~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~  217 (245)
                      ........++..++++++..++...+..|++..+++. ++++|+ ++..++.|..+.+.|+.+......
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~Gv~lv~~~~~  146 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGER-LSLLQILGILLALAGVLLILLGGG  146 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHhHHheecCCC
Confidence            5555667778889999999999999999999999996 777999 999999999999999998876544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.09  E-value=0.00015  Score=61.68  Aligned_cols=141  Identities=17%  Similarity=0.129  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHH
Q 025964           72 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT  151 (245)
Q Consensus        72 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      .+.+++-.-+++-+..++....+.++ +.+.+..+.. +....-+++..+......+.+. ........+|.-++-+++=
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~-~~Y~~l~~vy~~~~~~r~~~~~-~~~~~~~~~w~y~lla~~D   89 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSF-FNYVLLALVYTPILLYRRGFKK-WLKVLKRPWWKYFLLALLD   89 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHH-HHHHHHHHHHhhhhhhcccccc-chhhcchhHHHHHHHHHHH
Confidence            44455555555555555556665554 3344444443 3333323333333322211110 0011112233333346777


Q ss_pred             HHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          152 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       152 ~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ...++....+.++++.+.+.++.+...++++++++++++++ .++.+++|+.+++.|+.+.....
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~r-y~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRR-YSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhheeeec
Confidence            78888899999999999999999999999999999999999 99999999999999998766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.09  E-value=0.00043  Score=58.97  Aligned_cols=208  Identities=10%  Similarity=-0.013  Sum_probs=129.2

Q ss_pred             chhhhhhhhhhhhccchhHHHHHH-HHHHHHHHHHHHHHccccc---c----hhhHHHHHHhhhhceeeee----ccc--
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVM---S----CRMLLIMSVISFGVVVASY----GEI--   67 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~-~~~pi~~~~~~~~~~~e~~---~----~~~~~~~~~~~~Gv~l~~~----~~~--   67 (245)
                      ++...++...+++|+.++...-+. .+.-+...++..++++|-.   +    ..-.+++++.++|+++...    .|.  
T Consensus        83 W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~  162 (345)
T PRK13499         83 WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKM  162 (345)
T ss_pred             HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence            345667788899999998877554 5788888889888888643   2    3355788888899988665    222  


Q ss_pred             -------cchHHHHHHHHHHHHHHHHHH-------HHHHHHhhhcCCCCCHHHHHHHHhH---HHHHHHHHHHHhh---c
Q 025964           68 -------NINWIGVVYQMGGVVGEALRL-------IFMEILVKRKGLKLNPISVMYYVSP---CSALCLFIPWIFL---E  127 (245)
Q Consensus        68 -------~~~~~G~~~~l~~~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~---~  127 (245)
                             .....|+.+++++.+.++.|.       ...+....   .+.++.....-+..   ++.++.-..+...   .
T Consensus       163 ~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~---~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k  239 (345)
T PRK13499        163 GIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA---LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAK  239 (345)
T ss_pred             ccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh---cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence                   122689999999999999998       33322211   13455444333332   4444333322221   1


Q ss_pred             ccccc---cccc----cccchHHHHHHHHHHHHHHHHHHHHHhhchhHHHH----HHhhhhhhhhhhhhhhhccccccc-
Q 025964          128 KPKMD---ALET----WHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIR----VAGVVKDWVVVLFSALLFADTKLT-  195 (245)
Q Consensus       128 ~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~----~~~~~~pv~~~~~~~~~~~e~~~~-  195 (245)
                      ....+   +...    +........++|+.-+..+.++...-++.+.....    +...+.-+++.++|+ +++|. =+ 
T Consensus       240 ~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~-K~a  317 (345)
T PRK13499        240 NKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW-KGA  317 (345)
T ss_pred             CCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc-cCC
Confidence            11111   1111    11122345666766666667666666666443332    333667799999999 59998 44 


Q ss_pred             -----hhhhhhHHHHHHHHHHhhc
Q 025964          196 -----IINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       196 -----~~~~~G~~li~~gi~l~~~  214 (245)
                           ...++|.++++.|..+...
T Consensus       318 ~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        318 SRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             CccchhHHHHHHHHHHHHHHHHhh
Confidence                 5678999999999887654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=98.03  E-value=0.00045  Score=51.29  Aligned_cols=131  Identities=19%  Similarity=0.250  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHH
Q 025964           74 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFA  153 (245)
Q Consensus        74 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (245)
                      .++++.+.+.-+.+..+..++.++.+   ||+...+.....+.+.+.......+.+....   .....++.+++|+++..
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g---s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~---~~~~p~w~~lGG~lG~~   76 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG---SPLVASFISFGVGFILLLIILLITGRPSLAS---LSSVPWWAYLGGLLGVF   76 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHHHHHHHHHHHHhcccccch---hccCChHHhccHHHHHH
Confidence            56788888889998888888876532   5899888888888888777766655542221   11112344557888877


Q ss_pred             HHHHHHHHHhhchhHHHHHHhhh-hhhhhhhhhhh-hcc---ccccchhhhhhHHHHHHHHHH
Q 025964          154 LNLSVFLVISHTSALTIRVAGVV-KDWVVVLFSAL-LFA---DTKLTIINLFGYGIAIAGVAA  211 (245)
Q Consensus       154 ~~~~~~~~i~~~~a~~~~~~~~~-~pv~~~~~~~~-~~~---e~~~~~~~~~G~~li~~gi~l  211 (245)
                      ...+....+++.++......... +-+.+++++.+ +|+   ++ +++.+.+|..+++.|+.+
T Consensus        77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~-~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRP-FSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCC-CCHHHHHHHHHHHHHHhC
Confidence            77777888899999776665554 66778888886 443   55 899999999999999863

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.03  E-value=3.6e-06  Score=60.21  Aligned_cols=61  Identities=16%  Similarity=0.061  Sum_probs=55.7

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      .+-.+++.+++--.++...-+..++|+++++++++++|||++..+++++++..+|++++..
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            3456788899999999999999999999999999999999999999999999999998753

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.86  E-value=3.4e-05  Score=56.52  Aligned_cols=64  Identities=19%  Similarity=0.181  Sum_probs=57.1

Q ss_pred             chhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH--HcccccchhhHHHHHHhhhhceeeeec
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVA--AGLEVMSCRMLLIMSVISFGVVVASYG   65 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~--~~~e~~~~~~~~~~~~~~~Gv~l~~~~   65 (245)
                      +...+.+++.+++..|++.+.-+.+..++.+.+.++.  ++||+++..|++++++.++|+.++..+
T Consensus        58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            4567888999999999999999999999888888875  899999999999999999999987653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.72  E-value=6.1e-05  Score=54.26  Aligned_cols=64  Identities=17%  Similarity=0.130  Sum_probs=57.4

Q ss_pred             chhhhhhhhhhhhccchhHHHHHH-HHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG   65 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~-~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~   65 (245)
                      |+.++.+...+++++|++.+..+- ...-+.+++++.++++|+++..|++++.+.++|++.+...
T Consensus        40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            567888889999999999988774 6899999999999999999999999999999999877543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.60  E-value=0.00028  Score=58.59  Aligned_cols=62  Identities=15%  Similarity=0.044  Sum_probs=56.3

Q ss_pred             hhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec
Q 025964            4 MTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG   65 (245)
Q Consensus         4 ~~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~   65 (245)
                      ..-..++.|+.|.|.+..+-+-+++.+..++++..++|||++....++..++++|-.+++..
T Consensus        76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h  137 (335)
T KOG2922|consen   76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH  137 (335)
T ss_pred             HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence            34456788999999999999999999999999999999999999999999999999987754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.57  E-value=0.00018  Score=50.26  Aligned_cols=63  Identities=24%  Similarity=0.243  Sum_probs=55.1

Q ss_pred             chhhhhhhhhhhhccchhHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964            2 FAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~-~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      ++.++.+-..+++++|++.+-.+ .....+.+++.+++++||+++..|++++.+.++|++.+..
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            46678888899999999986554 5688999999999999999999999999999999986644

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.56  E-value=0.0003  Score=57.42  Aligned_cols=76  Identities=24%  Similarity=0.208  Sum_probs=68.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccch
Q 025964          142 LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK  218 (245)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~  218 (245)
                      +....++++....+...+.++++.+|.+..+....+.+++.++++++++++ ++..||++..+.+.|+.+.+.....
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~-ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRR-LSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcc-cchhhHHHHHHHHHHHheeecCCcc
Confidence            446677788888888899999999999999999999999999999999999 9999999999999999998766543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.53  E-value=0.00019  Score=50.95  Aligned_cols=63  Identities=19%  Similarity=0.287  Sum_probs=56.0

Q ss_pred             chhhhhhhhhhhhccchhHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964            2 FAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~-~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      |+.++.+...+++.+|++.+..+ ....-+.+++++++++||+++..|++++.+.++|++++..
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            56677888889999999998877 4578999999999999999999999999999999987754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.50  E-value=0.0049  Score=51.73  Aligned_cols=125  Identities=14%  Similarity=0.089  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHH
Q 025964           71 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC  150 (245)
Q Consensus        71 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                      ..|..+++++.++|+......|...++    .++....++...++++.+.+....... .. ...++    ......+++
T Consensus        11 ~~~~~~~~la~~~~~~~~~~~K~~~~~----~~~~~~~~~R~~~a~l~l~~~~~~~~~-~~-~~~~~----~~~~~~g~~   80 (293)
T PRK10532         11 WLPILLLLIAMASIQSGASLAKSLFPL----VGAPGVTALRLALGTLILIAIFKPWRL-RF-AKEQR----LPLLFYGVS   80 (293)
T ss_pred             chHHHHHHHHHHHHHhhHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHHHhHHhc-cC-CHHHH----HHHHHHHHH
Confidence            568999999999999999999987763    799999999999998877665422111 11 11111    112223334


Q ss_pred             HHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHh
Q 025964          151 TFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAY  212 (245)
Q Consensus       151 ~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~  212 (245)
                      ....+.+.+.++++.++..++...+..|++..+++.    |+ +..  ..+..+.+.|+.+.
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~-~~~--~~~~~i~~~Gv~li  135 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RR-PVD--FVWVVLAVLGLWFL  135 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CC-hHH--HHHHHHHHHHHhee
Confidence            444556677889999999999999999999987763    55 543  34456667777654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.45  E-value=0.011  Score=44.21  Aligned_cols=138  Identities=13%  Similarity=0.071  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHH
Q 025964           71 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLC  150 (245)
Q Consensus        71 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (245)
                      +...++++.+.++...+.-...++.+..   -+|....+.....+...+....+..+...... ..... .++...+|++
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~---~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~~~~~-pwW~~~GG~l   78 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYL---GSPLLASLISFLVGTVLLLILLLIKQGHPGLA-AVASA-PWWAWIGGLL   78 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHc---CChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-hccCC-chHHHHccch
Confidence            4557788889999999888888887653   26788888888887777777666544332222 11111 2334455566


Q ss_pred             HHHHHHHHHHHHhhchhH-HHHHHhhhhhhhhhhhhhhhcc----ccccchhhhhhHHHHHHHHHHhhc
Q 025964          151 TFALNLSVFLVISHTSAL-TIRVAGVVKDWVVVLFSALLFA----DTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       151 ~~~~~~~~~~~i~~~~a~-~~~~~~~~~pv~~~~~~~~~~~----e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      +...-........+.++. +....-.-+-+.+++++.+=+.    .+ +++..++|+.++++|+.+.+.
T Consensus        79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~-~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRP-LNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCC-CCHHHHHHHHHHHHHHHHhcc
Confidence            665555555667777774 4455555677788888776443    44 899999999999999666543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.41  E-value=0.00041  Score=48.83  Aligned_cols=63  Identities=22%  Similarity=0.137  Sum_probs=54.8

Q ss_pred             chhhhhhhhhhhhccchhHHHHHH-HHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~-~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      |+.++.+...+++.+|++.+-.+- ....+.+.+.+++++||+++..|++++.+.++|++.+..
T Consensus        39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            456778888899999999876554 588999999999999999999999999999999987643

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.39  E-value=0.0011  Score=47.80  Aligned_cols=58  Identities=17%  Similarity=0.322  Sum_probs=44.5

Q ss_pred             HHHHHhhchhH-HHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          158 VFLVISHTSAL-TIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       158 ~~~~i~~~~a~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ...++++.+.. ..++..-+..+.+.+.++++|||+ +|+.+++|+.+++.|+...+...
T Consensus        47 ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~-~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         47 LSFAVKKIALGVAYALWEGIGILFITLFSVLLFDES-LSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHhhcCC
Confidence            33445665553 334445567778889999999999 99999999999999999876544

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.36  E-value=0.00047  Score=48.81  Aligned_cols=61  Identities=13%  Similarity=0.008  Sum_probs=53.3

Q ss_pred             chhhhhhhhhhhhccchhHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceee
Q 025964            2 FAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA   62 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~-~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~   62 (245)
                      ++.++.+...+++.+|++.+-.+ .....+.+.+.+++++||+++..|++++.+.+.|++.+
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            45677888889999999986655 45788999999999999999999999999999999764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.30  E-value=0.0019  Score=45.92  Aligned_cols=57  Identities=18%  Similarity=0.125  Sum_probs=43.9

Q ss_pred             HHHHhhchhH-HHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          159 FLVISHTSAL-TIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       159 ~~~i~~~~a~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ..++++.+.. ..++..-+..+.+.+.|+++|||+ +++.+++|+.+++.|+...+..+
T Consensus        48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~-~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhcCC
Confidence            3445665543 334445567778899999999999 99999999999999999976543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.23  E-value=3.7e-05  Score=61.32  Aligned_cols=201  Identities=13%  Similarity=0.090  Sum_probs=138.1

Q ss_pred             chhhhhhhhhhhhccchhHHHHHH-HHHHHHHHHHHHHHcccccchhhH----HHHHHhhhhceeeeeccc--------c
Q 025964            2 FAMTLWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRML----LIMSVISFGVVVASYGEI--------N   68 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~~-~~~pi~~~~~~~~~~~e~~~~~~~----~~~~~~~~Gv~l~~~~~~--------~   68 (245)
                      ++..+...+-|+++++++.+.-+. .+.-+-+.+++.+.++|-.+..+.    +++++.+.|+.+-+..|.        +
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~  148 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPS  148 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChH
Confidence            345666777888998888776544 467788889999999999888776    478888899998876542        1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHH
Q 025964           69 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC  148 (245)
Q Consensus        69 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      ..-.|+...+.|.+.|-.|.+..+..      +.+.+....-++.-..+..+......+....      +...+.-...|
T Consensus       149 n~kkgi~~L~iSt~GYv~yvvl~~~f------~v~g~saiLPqAiGMv~~ali~~~~~~~~~~------~K~t~~nii~G  216 (288)
T COG4975         149 NLKKGIVILLISTLGYVGYVVLFQLF------DVDGLSAILPQAIGMVIGALILGFFKMEKRF------NKYTWLNIIPG  216 (288)
T ss_pred             hhhhheeeeeeeccceeeeEeeeccc------cccchhhhhHHHHHHHHHHHHHhhcccccch------HHHHHHHHhhH
Confidence            12478888899999999998887654      3566666655544333332333222211111      11123444556


Q ss_pred             HHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchh----hhhhHHHHHHHHHHhhcc
Q 025964          149 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTII----NLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       149 ~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~----~~~G~~li~~gi~l~~~~  215 (245)
                      +.-...|.+++..-++.+..+.=.++.+--+++.+=|+++++|+ =|..    .++|+++++.|..+....
T Consensus       217 ~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ek-KtkkEm~~v~iGiilivvgai~lg~~  286 (288)
T COG4975         217 LIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEK-KTKKEMVYVIIGIILIVVGAILLGIA  286 (288)
T ss_pred             HHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEecc-CchhhhhhhhhhHHHHHHHhhhhhee
Confidence            55566677777777777777766777888899999999999999 4443    567888888887765543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.18  E-value=0.0025  Score=53.63  Aligned_cols=119  Identities=13%  Similarity=0.061  Sum_probs=80.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHH
Q 025964           70 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCL  149 (245)
Q Consensus        70 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (245)
                      ..+|+.+++.++++.+...+++|+-.+|.+.+-.+..                    +.. .+...+  ..|+.......
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--------------------~~~-~~~l~~--~~W~~G~~~~~   61 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--------------------SGG-RSYLRR--PLWWIGLLLMV   61 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--------------------chh-hHHHhh--HHHHHHHHHHh
Confidence            4689999999999999999999987765432100000                    000 000000  01122111112


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          150 CTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       150 ~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      .+   ....+.++...++.-.+.++.+.-+...+++..++||+ ++...+.|..+++.|..+....
T Consensus        62 ~g---~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~-~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   62 LG---EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEK-LTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             cc---hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhccc-chHhHHhhHHHHHhhheeeEEe
Confidence            22   23344557778888889999999999999999999999 9999999999999999876543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.16  E-value=0.0092  Score=42.24  Aligned_cols=54  Identities=13%  Similarity=0.120  Sum_probs=43.8

Q ss_pred             HHHHhhchh-HHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhh
Q 025964          159 FLVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYN  213 (245)
Q Consensus       159 ~~~i~~~~a-~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~  213 (245)
                      ..+.|+.+. ...++..-+..+.+.+.++++|||+ +++.+++|+.+++.|+...+
T Consensus        53 s~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~-~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         53 SQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQR-LNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHhc
Confidence            344666655 4456666677888899999999999 99999999999999998754

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.14  E-value=0.0013  Score=53.61  Aligned_cols=133  Identities=13%  Similarity=0.052  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHH
Q 025964           73 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF  152 (245)
Q Consensus        73 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (245)
                      |.+.+++|+++++.+.+=.|+.-     ..|++-...+......++-....+..+.+.+   .      .+..++|.+-.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~-----~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f---~------p~amlgG~lW~   66 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD-----TGDGFFFQWVMCSGIFLVGLVVNLILGFPPF---Y------PWAMLGGALWA   66 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc-----CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc---e------eHHHhhhhhhh
Confidence            45677888888888777666542     2355555444443333332222222222221   1      12334444444


Q ss_pred             HHHHHHHHHHhhchh-HHHHHHhhhhhhhhhhhhhh-hccccc----cchhhhhhHHHHHHHHHHhhcccchh
Q 025964          153 ALNLSVFLVISHTSA-LTIRVAGVVKDWVVVLFSAL-LFADTK----LTIINLFGYGIAIAGVAAYNNHKLKK  219 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a-~~~~~~~~~~pv~~~~~~~~-~~~e~~----~~~~~~~G~~li~~gi~l~~~~~~~~  219 (245)
                      ..|.+..-.++.++- .-..+.+..+-+.+...|-+ +||+++    -.+..++|++++++|..++...|.+.
T Consensus        67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            445555555666554 34445555566666666644 676441    35679999999999999998766544

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.11  E-value=0.00097  Score=45.94  Aligned_cols=54  Identities=19%  Similarity=0.213  Sum_probs=32.8

Q ss_pred             chhhhhhhhhhhhccchhHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHh
Q 025964            2 FAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVI   55 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~-~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~   55 (245)
                      |+.++.+...+++++|.+.+-.+ .....+.+.+.+.+++||+++..|++++.+.
T Consensus        39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            56778889999999999998555 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.02  E-value=0.0089  Score=51.07  Aligned_cols=138  Identities=14%  Similarity=0.018  Sum_probs=84.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHH--hHHHHHHHHHHHH-hhcccccc-ccccccc-chHHH
Q 025964           70 NWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYV--SPCSALCLFIPWI-FLEKPKMD-ALETWHF-PPLML  144 (245)
Q Consensus        70 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~-~~~~~~~~-~~~~~~~-~~~~~  144 (245)
                      ...|+++.+++++|++.+.+-.|+ .|+     -+++.. |-  ..++- ++.|+.. ....+... ....... .+...
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~-----w~wE~~-W~v~gi~~w-l~~~~~~g~~~~~~f~~~~~~~~~~~~~~~   76 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKK-----WSWETM-WSVGGIFSW-LILPWLIAALLLPDFWAYYSSFSGSTLLPV   76 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCC-----CchhHH-HHHHHHHHH-HHHHHHHHHHHhhhHHHHHHhcCHHHHHHH
Confidence            357999999999999999888877 332     223333 32  11111 1222111 11112221 1111111 22345


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHHHHh-hhhhhhhhhhhhhhcccccc-------chhhhhhHHHHHHHHHHhhccc
Q 025964          145 TLNCLCTFALNLSVFLVISHTSALTIRVAG-VVKDWVVVLFSALLFADTKL-------TIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       145 ~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~-~~~pv~~~~~~~~~~~e~~~-------~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .++|+.--..++..+..+++.+.+....++ -+.-+.+.+++.+++||- .       ....++|.+++++|+.+..++.
T Consensus        77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew-~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNF-DVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccc-ccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            566666666778888888888875554444 467788999999999965 3       2347899999999999988744

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.96  E-value=0.033  Score=47.17  Aligned_cols=140  Identities=16%  Similarity=0.175  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhccc---ccc---cccccccc--hHHHH
Q 025964           74 VVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKP---KMD---ALETWHFP--PLMLT  145 (245)
Q Consensus        74 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~---~~~~~~~~--~~~~~  145 (245)
                      .+..+...+-.+......|...++++.+..|...++..=++-.++.....+..+..   +..   ....+...  ..-..
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            34445555566666666666655544456777777666555555544443333211   111   11111111  23355


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          146 LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       146 ~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      ...++...-|...+....+.+|.+..+...++...+.++..++++++ ++..||....+...|+.+.+.
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rk-Ls~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRK-LSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHhc
Confidence            66667777777788889999999999999999999999999999999 999999999999999999883

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.96  E-value=0.0074  Score=42.22  Aligned_cols=55  Identities=22%  Similarity=0.351  Sum_probs=44.9

Q ss_pred             HHHhhchh-HHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          160 LVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       160 ~~i~~~~a-~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      .++|+.+. ...++..-.-.+.+.+.|+++|||+ ++..+++|..+++.|+...+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~-l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGES-LSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCc-CCHHHHHHHHHHHHHHHHhhhc
Confidence            34566554 3456667777888899999999999 9999999999999999887654

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.94  E-value=0.0069  Score=42.63  Aligned_cols=54  Identities=9%  Similarity=0.137  Sum_probs=44.1

Q ss_pred             HHHhhchh-HHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          160 LVISHTSA-LTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       160 ~~i~~~~a-~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      .++|+.+. ...++..-+..+.+.+.|+++|||+ +|+.+++|+.+++.|+...+.
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~-~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGES-ASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHhhhc
Confidence            34566554 4456666677888899999999999 999999999999999988654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.62  E-value=0.012  Score=48.42  Aligned_cols=113  Identities=11%  Similarity=0.082  Sum_probs=73.8

Q ss_pred             CCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhh-hhhhh
Q 025964          102 LNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTSALTIRVAGV-VKDWV  180 (245)
Q Consensus       102 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~-~~pv~  180 (245)
                      -+|.+.+.....-+.++-+.. .....+..+.+   ...++....+|++-...+...+...++.+.+++..++. ++-+.
T Consensus        10 G~~~~Q~lG~t~Gali~alv~-~~~~~p~~~~~---~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg   85 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVV-FLFRQPAFSMS---GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVG   85 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHH-HHHhCCCcchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence            356666655554433333333 33333333210   12235567777777777888888899988877777765 56677


Q ss_pred             hhhhhhhhccccccchhh----hhhHHHHHHHHHHhhcccchh
Q 025964          181 VVLFSALLFADTKLTIIN----LFGYGIAIAGVAAYNNHKLKK  219 (245)
Q Consensus       181 ~~~~~~~~~~e~~~~~~~----~~G~~li~~gi~l~~~~~~~~  219 (245)
                      +.++++++|||. -+..+    .++.++++.|+.+.++.++++
T Consensus        86 ~sl~gv~~fgEW-~~~~~~~~G~~Al~liiiGv~lts~~~~~~  127 (269)
T PF06800_consen   86 TSLIGVLFFGEW-TTTTQKIIGFLALVLIIIGVILTSYQDKKS  127 (269)
T ss_pred             HHHHHHhhcCCC-CCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence            889999999998 66554    458889999999887765443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.58  E-value=0.00042  Score=56.11  Aligned_cols=133  Identities=13%  Similarity=0.154  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHH
Q 025964           72 IGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCT  151 (245)
Q Consensus        72 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (245)
                      .|..+..++ ..+....+..++....     +|.++-....+.-.++..|.......+.+ .++.-..   ++++=|+.+
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v~-gp~g~R~---~LiLRg~mG  107 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPVI-GPEGKRK---WLILRGFMG  107 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeeee-cCCCcEE---EEEeehhhh
Confidence            567777776 6666666666666554     44444333322222222222111111111 1111111   122334444


Q ss_pred             HHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          152 FALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       152 ~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      +..-+..|+++++.+-.-+.++....|+++.++++.+++|+ .|....+|..+.+.|+.+..+.
T Consensus       108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~-~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEP-FTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCC-CcHHHHHHHHHhhheEEEEecC
Confidence            44445567888999999999999999999999999999999 9999999999999999987654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=96.37  E-value=0.0078  Score=45.11  Aligned_cols=58  Identities=14%  Similarity=0.005  Sum_probs=52.9

Q ss_pred             hhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceee
Q 025964            5 TLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA   62 (245)
Q Consensus         5 ~~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~   62 (245)
                      .....+..++++++-..++......+.+.+++.++++|+++..++.|++++++|+.+-
T Consensus        94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            4456677889999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.25  E-value=0.01  Score=47.85  Aligned_cols=55  Identities=13%  Similarity=0.034  Sum_probs=50.2

Q ss_pred             hhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhce
Q 025964            6 LWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVV   60 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~   60 (245)
                      +.+.-.+++..|...+.++.++.|.+.++.++++++|+++..||.++...+++..
T Consensus       224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            4456678999999999999999999999999999999999999999998887765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.00  E-value=0.047  Score=43.74  Aligned_cols=65  Identities=14%  Similarity=0.059  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccch
Q 025964          153 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLK  218 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~  218 (245)
                      ..-...+.++++.+=-+.-+-...+|+-.+++|+++.+.. .+|.......+|+.|+.++.+.+.+
T Consensus        97 lAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~Ks-Y~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   97 LAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKS-YHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             HHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhccc-ccHHHHHHHHHHHHHHHHhhccccc
Confidence            3445567788888888888889999999999999999999 9999999999999999999887543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.85  E-value=0.027  Score=38.74  Aligned_cols=48  Identities=17%  Similarity=0.220  Sum_probs=25.9

Q ss_pred             HHHHHHhhchhHHH-HHHhhhhhhhhhhhhhhhccccccchhhhhhHHHH
Q 025964          157 SVFLVISHTSALTI-RVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIA  205 (245)
Q Consensus       157 ~~~~~i~~~~a~~~-~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li  205 (245)
                      +...++|+.+...+ .+..-+..+...+.|+++|||+ +|+.+++|+.+|
T Consensus        45 ~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~-~s~~~~~gi~lI   93 (93)
T PF00893_consen   45 FLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGES-LSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred             HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHhheeeC
Confidence            34566777776544 5566678889999999999999 999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.80  E-value=0.014  Score=49.64  Aligned_cols=75  Identities=17%  Similarity=0.248  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccc
Q 025964          142 LMLTLNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKL  217 (245)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~  217 (245)
                      ...++-+..-+..++.+..++++++....++++...-+++..+|..+-+|+ +|+...++.++.+.|+++.+....
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~-ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVER-FTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcch-hhHHHHHHHHHhhccEEEEEeccc
Confidence            356677888889999999999999999999999999999999999999999 999999999999999999877644

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.27  E-value=0.032  Score=39.66  Aligned_cols=57  Identities=25%  Similarity=0.145  Sum_probs=49.0

Q ss_pred             hhhhhhhhhccchhHHHHHH-HHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceee
Q 025964            6 LWLGNTAYLYISVAFAQMLK-AIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVA   62 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~-~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~   62 (245)
                      ...+++.+...+.+.+.-+. ++.-++|++.++++.+|..+++.++++.+.++|+.+.
T Consensus        55 Sv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   55 SVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            44567778888888888775 8899999999999988888999999999999999864

Many members are annotated as potential transmembrane proteins.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=94.79  E-value=0.83  Score=38.84  Aligned_cols=140  Identities=12%  Similarity=0.066  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHH-hhccccccc---ccccccchHHHHH
Q 025964           71 WIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWI-FLEKPKMDA---LETWHFPPLMLTL  146 (245)
Q Consensus        71 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~---~~~~~~~~~~~~~  146 (245)
                      ..|+++..+++++.+.+.+=.||..+   -+++.+.++  +.+++- +.+|... ....|+..+   ..+..-.+...++
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkvk~---WsWEs~Wlv--~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKVKG---WSWESYWLV--QGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhcCC---ccHHHHHHH--HHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            67999999999999999888887622   233333333  333333 3344432 223333221   1111111112222


Q ss_pred             HHHHHHHHHHHHHHHHhhchh-HHHHHHhhhhhhhhhhhhhhh-------ccccccchhhhhhHHHHHHHHHHhhcccch
Q 025964          147 NCLCTFALNLSVFLVISHTSA-LTIRVAGVVKDWVVVLFSALL-------FADTKLTIINLFGYGIAIAGVAAYNNHKLK  218 (245)
Q Consensus       147 ~~~~~~~~~~~~~~~i~~~~a-~~~~~~~~~~pv~~~~~~~~~-------~~e~~~~~~~~~G~~li~~gi~l~~~~~~~  218 (245)
                      +..-+. ....+=..+++++- ...++..=+-.+++.++-.++       ++++ -....++|.+++++|+.+..++...
T Consensus        80 G~lWGI-GgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~-~g~~vL~Gv~v~LiGIai~g~AG~~  157 (344)
T PF06379_consen   80 GVLWGI-GGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATP-SGQIVLLGVAVCLIGIAICGKAGSM  157 (344)
T ss_pred             HHHHhc-chhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCC-CchhhhhHHHHHHHHHHHHhHHHHh
Confidence            222221 12222223444432 222222222233333332222       3334 4557899999999999998876543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=94.43  E-value=0.066  Score=42.93  Aligned_cols=56  Identities=9%  Similarity=-0.031  Sum_probs=50.7

Q ss_pred             hhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhcee
Q 025964            6 LWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVV   61 (245)
Q Consensus         6 ~~~~~~al~~~~~~~~~v~~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l   61 (245)
                      ..+-++.++|.+.....+...+.++.+.+++.++++|+++..++.+..+.+.|+.+
T Consensus       166 ~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       166 GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34567788999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.38  E-value=0.034  Score=44.81  Aligned_cols=131  Identities=10%  Similarity=0.056  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHH
Q 025964           73 GVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTF  152 (245)
Q Consensus        73 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (245)
                      +++.+++-++.|+.......+.      +-+|.+.+....+-+.++.+..+++ ..|..    ++ ..+...+.+|..-.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~------GG~p~qQ~lGtT~GALifaiiv~~~-~~p~~----T~-~~~iv~~isG~~Ws   70 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF------GGKPYQQTLGTTLGALIFAIIVFLF-VSPEL----TL-TIFIVGFISGAFWS   70 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec------CCChhHhhhhccHHHHHHHHHHhee-ecCcc----ch-hhHHHHHHhhhHhh
Confidence            4678888899998865554433      2356666655554433333333222 22211    11 11234455555555


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhh-hhhhhhhhhhhhhccccccchhh----hhhHHHHHHHHHHhhccc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGV-VKDWVVVLFSALLFADTKLTIIN----LFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~-~~pv~~~~~~~~~~~e~~~~~~~----~~G~~li~~gi~l~~~~~  216 (245)
                      +.+...+.+++..+.+++..++. .+-+-+.+++++.|||- .+..+    .++.++++.|+.+..+.+
T Consensus        71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG~~lTs~~~  138 (288)
T COG4975          71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIGIYLTSKQD  138 (288)
T ss_pred             hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHhheEeeeec
Confidence            66777888888888887777665 56788889999999999 87764    456777888887766544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.33  E-value=2.5  Score=35.43  Aligned_cols=131  Identities=11%  Similarity=0.098  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHhhhcC----CC-CCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHH
Q 025964           83 GEALRLIFMEILVKRKG----LK-LNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLS  157 (245)
Q Consensus        83 ~~a~~~v~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (245)
                      ++-.+.++++++.++.-    .+ -++.-+.+-+.+.+.++........ ....+...    +++-....++.......+
T Consensus        25 t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~-k~~~~~~a----pl~~y~~is~tn~~s~~~   99 (327)
T KOG1581|consen   25 TFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWW-KKELSGVA----PLYKYSLISFTNTLSSWC   99 (327)
T ss_pred             HHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcc-cccCCCCC----chhHHhHHHHHhhcchHH
Confidence            44456677888776421    11 2444555666655544432221111 11111112    223334445555555666


Q ss_pred             HHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcccchh
Q 025964          158 VFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHKLKK  219 (245)
Q Consensus       158 ~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~~~~  219 (245)
                      .+-++|+++=-+..+...-+-+..++++.++.+.+ .++...+-+.+|-.|+.++...+...
T Consensus       100 ~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~k-y~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen  100 GYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRK-YSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCc-cCcHHHHHHHHHHhheeeEEEecCCC
Confidence            78889999999999999999999999999999999 99999999999999999988775443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=92.81  E-value=0.2  Score=35.69  Aligned_cols=55  Identities=18%  Similarity=0.192  Sum_probs=43.3

Q ss_pred             HHHHHHHhhchhHHHHHH-hhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHH
Q 025964          156 LSVFLVISHTSALTIRVA-GVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA  211 (245)
Q Consensus       156 ~~~~~~i~~~~a~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l  211 (245)
                      ..++..+++.+-+.+..+ +.+.-+++.+.++++.+|. .+...++|+.+++.|+.+
T Consensus        56 v~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~-~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   56 VLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEV-ISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcc-cchhHHHHHHHHHcCeee
Confidence            345566777776555555 5788889999998888888 899999999999999864

Many members are annotated as potential transmembrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=91.57  E-value=0.16  Score=39.70  Aligned_cols=62  Identities=15%  Similarity=0.188  Sum_probs=55.2

Q ss_pred             HHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          154 LNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       154 ~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .++.+..++++++|+.++.+.+-+..+..++++.+++++ +....++..++.+.|+....+..
T Consensus        66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~-~~~~kIlaailAI~GiVmiay~D  127 (290)
T KOG4314|consen   66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDR-FMGFKILAAILAIGGIVMIAYAD  127 (290)
T ss_pred             CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccc-hhhhhHHHHHHHhCcEEEEEecc
Confidence            355567789999999999999999999999999999999 99999999999999998776543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.54  E-value=0.095  Score=43.90  Aligned_cols=121  Identities=15%  Similarity=0.131  Sum_probs=79.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHH
Q 025964           69 INWIGVVYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNC  148 (245)
Q Consensus        69 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (245)
                      .+.+|.++++.+++..+...++.|+-.+|.+    .   ..             .--.+++.. -.  .++.||...+.-
T Consensus        18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~----~---~~-------------~ra~~gg~~-yl--~~~~Ww~G~ltm   74 (335)
T KOG2922|consen   18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAG----A---SG-------------LRAGEGGYG-YL--KEPLWWAGMLTM   74 (335)
T ss_pred             CceeeeeehhhccEEEeeehhhhHHHHHHHh----h---hc-------------ccccCCCcc-hh--hhHHHHHHHHHH
Confidence            4467888999998888888888777665421    0   00             000111110 00  112233333333


Q ss_pred             HHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          149 LCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       149 ~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ..+-.   ..|.+....++.-++..+.+.-+...+++..+++|+ +++...+|++++++|-.....+.
T Consensus        75 ~vGei---~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ek-l~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   75 IVGEI---ANFAAYAFAPASLVTPLGALSVIISAILASFFLKEK-LNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHhH---hhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHH-HHHhhhhheeEEecccEEEEEec
Confidence            33333   344446677888888899999999999999999999 99999999999999987776554

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=89.13  E-value=12  Score=31.54  Aligned_cols=133  Identities=11%  Similarity=0.031  Sum_probs=82.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHh--hcccccccccccccchHHHHHHHHHHH
Q 025964           75 VYQMGGVVGEALRLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIF--LEKPKMDALETWHFPPLMLTLNCLCTF  152 (245)
Q Consensus        75 ~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (245)
                      .-++.-+++..+..+..|......+.+ ....++.+|...+.+.+...-..  .+.+..+......+...     .++-+
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~-~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~-----~~lf~   88 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFP-MGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPV-----SLLFV   88 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccH-----HHHHH
Confidence            344444444445555666666554321 23444568887776665544322  12222111111111111     12223


Q ss_pred             HHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          153 ALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       153 ~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      +..++....+++.+.....++..+.|+...+....++|.+ ++...+.....+++|...+..
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhcc
Confidence            3334455668999999999999999999999999999988 999999999999998877654

>PRK02237 hypothetical protein; Provisional

Probab=88.25  E-value=3.1  Score=29.14  Aligned_cols=46  Identities=15%  Similarity=0.031  Sum_probs=38.1

Q ss_pred             HHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          170 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       170 ~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .+..+-...+.++++++.+-|++ ++...++|..+++.|..+..+.+
T Consensus        62 YAAYGGvyI~~Sl~W~w~vdg~~-Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         62 YAAYGGVYVAGSLLWLWVVDGVR-PDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             HHHhhhHHHHHHHHHHHHhcCcC-CChhHHHhHHHHHHhHHHheecC
Confidence            34445556778889999999999 99999999999999998876554

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=86.34  E-value=3.4  Score=28.91  Aligned_cols=46  Identities=20%  Similarity=0.070  Sum_probs=38.3

Q ss_pred             HHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          170 IRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       170 ~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      .+..+-...+.++++++.+-+++ ++...++|..+++.|+.+..+.+
T Consensus        60 YAAYGGvfI~~Sl~W~w~vdg~~-Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   60 YAAYGGVFIVASLLWGWLVDGVR-PDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             HHHhhhhHHHHHHHHHhhhcCcC-CChHHHHhHHHHHHhHHheEecC
Confidence            34445566778899999999999 99999999999999998876654

; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=84.62  E-value=16  Score=30.46  Aligned_cols=68  Identities=21%  Similarity=0.217  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhc
Q 025964          146 LNCLCTFALNLSVFLVISHTSALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNN  214 (245)
Q Consensus       146 ~~~~~~~~~~~~~~~~i~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~  214 (245)
                      ..+++-.......+.++..++|+..-+..-.-.++.-+++..++|.+ ++..||.|+..+..|....-.
T Consensus        91 ~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~t-i~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   91 PPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRT-ITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             ChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcc-cchhhHHHHHHHHhhhheeee
Confidence            35566555556667778888888888888888889999999999999 999999999999999876543

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=83.15  E-value=2.8  Score=29.28  Aligned_cols=39  Identities=13%  Similarity=0.095  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec
Q 025964           27 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG   65 (245)
Q Consensus        27 ~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~   65 (245)
                      ...+...+..+.+.|+|+++..+++..++++|+.++.+.
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            467778888999999999999999999999999887653

; GO: 0016020 membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=82.12  E-value=1.5  Score=37.22  Aligned_cols=121  Identities=18%  Similarity=0.189  Sum_probs=67.2

Q ss_pred             HHHHHHHHhhhcCCCCCHHHHHHHHhHHHHHHHHHHHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHHHhhch
Q 025964           87 RLIFMEILVKRKGLKLNPISVMYYVSPCSALCLFIPWIFLEKPKMDALETWHFPPLMLTLNCLCTFALNLSVFLVISHTS  166 (245)
Q Consensus        87 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  166 (245)
                      .+++.|+.+++.+- .-|..++......+.+...........+.. .. +....+.-++--++............+++.+
T Consensus        32 ~~~~nK~il~~~~f-~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~-~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   32 VIILNKYILSKYGF-PFPITLTMLHLFCGALALLVIKVLKLVPPS-KI-SSKLPLRTLLPLGLVFCISHVLGNVSLSYVP  108 (316)
T ss_pred             eEEeeHhhhccCCC-CCccHHHHHHHHHHHHHHHHHHHhcCCCCC-cc-ccccchHHHHHHHHHHHHHHHhcchhhhccc
Confidence            34455666653222 244455544444444443333322222211 11 0111122233334444444555667789999


Q ss_pred             hHHHHHHhhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHH
Q 025964          167 ALTIRVAGVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAA  211 (245)
Q Consensus       167 a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l  211 (245)
                      ....-.+..++|+++++++.++.+|+ .+...+.-...++.|+.+
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~-~s~~~~lsL~piv~GV~i  152 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKT-YSSMTYLSLLPIVFGVAI  152 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCC-CcceEEEEEEEeeeeEEE
Confidence            99999999999999999999999999 877544444444444333

>PRK02237 hypothetical protein; Provisional

Probab=81.71  E-value=3.5  Score=28.88  Aligned_cols=38  Identities=8%  Similarity=-0.029  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964           27 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus        27 ~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      ...+...+..+...|+|+++..+++..++++|+.++.+
T Consensus        68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY  105 (109)
T ss_pred             HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence            45666778899999999999999999999999987654

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=80.04  E-value=3.8  Score=28.49  Aligned_cols=39  Identities=13%  Similarity=-0.029  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec
Q 025964           27 IMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG   65 (245)
Q Consensus        27 ~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~   65 (245)
                      ...+...+..++.-|.++++..+.+..++++|+.++..+
T Consensus        67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~  105 (109)
T COG1742          67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG  105 (109)
T ss_pred             hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence            456677778888999999999999999999999887764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	245
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.8
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.46
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.38
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.34

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.80  E-value=5.9e-09  Score=76.07  Aligned_cols=67  Identities=18%  Similarity=0.127  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHhhchhHHHHHH-hhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhccc
Q 025964          149 LCTFALNLSVFLVISHTSALTIRVA-GVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNHK  216 (245)
Q Consensus       149 ~~~~~~~~~~~~~i~~~~a~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~~  216 (245)
                      ++.....+++..++++.++..+..+ ..+.|+++.++|+++|||+ +++.+++|+.+++.|+.+.+..+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~-ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344445567788999999988887 8999999999999999999 99999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.46  E-value=1.7e-07  Score=65.91  Aligned_cols=64  Identities=17%  Similarity=0.258  Sum_probs=58.5

Q ss_pred             chhhhhhhhhhhhccchhHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeeec
Q 025964            2 FAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASYG   65 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~-~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~   65 (245)
                      ++.++.+...++++.|++.+..+ ..+.|+++++++++++||+++..|++++.+.++|++++...
T Consensus        40 ~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            45677888899999999999888 89999999999999999999999999999999999887654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.38  E-value=1.3e-06  Score=61.37  Aligned_cols=64  Identities=17%  Similarity=0.059  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHhhchhHHHHHH-hhhhhhhhhhhhhhhccccccchhhhhhHHHHHHHHHHhhcc
Q 025964          151 TFALNLSVFLVISHTSALTIRVA-GVVKDWVVVLFSALLFADTKLTIINLFGYGIAIAGVAAYNNH  215 (245)
Q Consensus       151 ~~~~~~~~~~~i~~~~a~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~~G~~li~~gi~l~~~~  215 (245)
                      ......++..++|+.+..++-.+ ..+.|+.+.++++++|||+ +|+.+++|+.+++.|+...+..
T Consensus        40 ~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~-~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQR-LDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHhcC
Confidence            33344556678999999888777 8999999999999999999 9999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.34  E-value=2.3e-07  Score=67.62  Aligned_cols=63  Identities=17%  Similarity=0.285  Sum_probs=47.0

Q ss_pred             chhhhhhhhhhhhccchhHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHhhhhceeeee
Q 025964            2 FAMTLWLGNTAYLYISVAFAQML-KAIMPVAVFILGVAAGLEVMSCRMLLIMSVISFGVVVASY   64 (245)
Q Consensus         2 ~~~~~~~~~~al~~~~~~~~~v~-~~~~pi~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~   64 (245)
                      ++.++.+.+.++++.|++.+..+ .++.|++++++++++++|+++..+++++++.++|++++..
T Consensus        40 ~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            45678889999999999988888 8999999999999999999999999999999999987754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00