Citrus Sinensis ID: 026012


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-----
MENKASISSLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
cccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccEEccEEccccccccccccccEEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccEEEEEEEEccccccEEEEcccccccccEEEEEccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccEEccccccEEEEEEcc
ccHHHHHHHHHHHHHHHHHHcccEEEEEEccccccEcccEccccccccEEcccccEEEEEcccccccEEEEEccccccccccEEEEcccccccEEEEccccccccccEEEEEEccccccEEEEEEEccccccEEEEEccccccccccccccccccEEcccccccHHcEEccccccEEEEccHHHHHcccccccccccccccccccHHHHHHHHHccccEEcccccccccEEccccccEEEEEccc
MENKASISSLLLLLLIISGGQSEVILNIENQCSYTVwlaaspssgdfnsehapgtleifsmpepwtgsiwartkcsnnesfyfscetgdcgtgqvdcqgpmprypvtlLNLSINNKSEVSYEVSLnhgfnvpirirpdggtlvdrsgsscpvvdciadlsnvcapelvatnkngsyvacnspcdalrdarfcctenfsgqacqpnqyskkfKQLCglahtypadnnpptyscgganrynvtfcpl
MENKASISSLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENfsgqacqpnqYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
MENKAsisslllllliisGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
*******SSLLLLLLIISGGQSEVILNIENQCSYTVWLAA*************GTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFC**
****ASI*SLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
********SLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
*ENKASISSLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTL*****SSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MENKASISSLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query245 2.2.26 [Sep-21-2011]
P83332246 Thaumatin-like protein 1 N/A no 0.971 0.967 0.358 9e-39
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.942 0.939 0.357 2e-36
O80327244 Thaumatin-like protein 1 N/A no 0.967 0.971 0.342 1e-34
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.951 0.958 0.350 2e-34
P83335242 Thaumatin-like protein 2 N/A no 0.897 0.909 0.360 1e-33
P83336212 Thaumatin-like protein 1b N/A no 0.771 0.891 0.375 6e-33
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.959 0.959 0.349 2e-31
P28493239 Pathogenesis-related prot no no 0.951 0.974 0.336 2e-30
Q41350252 Osmotin-like protein OS=S N/A no 0.861 0.837 0.356 2e-28
P33679227 Zeamatin OS=Zea mays GN=Z N/A no 0.922 0.995 0.322 4e-26
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function desciption
 Score =  160 bits (404), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 127/251 (50%), Gaps = 13/251 (5%)

Query: 1   MENKASISSLLLLLLIISGGQSEVILNIENQCSYTVWLAA-----SPSSGDFNSEHAPGT 55
           M+++A++  L  L ++   G     +   N+CSYTVW         P       E A G 
Sbjct: 2   MKSQAALLGLTTLAILFFSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGI 61

Query: 56  LEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSI-N 114
                 P PW+G  + RT+CS + S  F+C T DCG+GQV C G     P TL+ ++I +
Sbjct: 62  SRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIAS 121

Query: 115 NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNG 174
           N  +  Y+VSL  GFN+P+ + P GGT        C    C AD++ VC   L     +G
Sbjct: 122 NGGQDFYDVSLVDGFNLPMSVAPQGGT------GKCKASTCPADINKVCPAPLQVKGSDG 175

Query: 175 SYVACNSPCDALRDARFCCT-ENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCG 233
           S +AC S C A    ++CCT  N   + C P  YSK FK  C  A++Y  D+   T++C 
Sbjct: 176 SVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCS 235

Query: 234 GANRYNVTFCP 244
           G   Y +TFCP
Sbjct: 236 GRPAYLITFCP 246




May be involved in protecting plant tissues from pathogen infection.
Prunus persica (taxid: 3760)
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|Q41350|OLP1_SOLLC Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 Back     alignment and function description
>sp|P33679|ZEAM_MAIZE Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
225441131242 PREDICTED: thaumatin-like protein 1-like 0.967 0.979 0.637 4e-82
255556824233 Protein P21, putative [Ricinus communis] 0.922 0.969 0.586 2e-75
356537001240 PREDICTED: thaumatin-like protein 1-like 0.902 0.920 0.541 2e-63
359481935227 PREDICTED: LOW QUALITY PROTEIN: thaumati 0.914 0.986 0.548 2e-60
388500086238 unknown [Lotus japonicus] 0.889 0.915 0.436 5e-47
190613907246 putative allergen Pru p 2.01A [Prunus du 0.971 0.967 0.366 8e-38
225637998248 thaumatin-like protein [Pyrus pyrifolia] 0.967 0.955 0.380 2e-37
359744030246 thaumatin-like protein 2 [Prunus persica 0.971 0.967 0.366 2e-37
25091405246 RecName: Full=Thaumatin-like protein 1; 0.971 0.967 0.358 5e-37
190613905246 putative allergen Pru du 2.01A [Prunus d 0.971 0.967 0.354 7e-37
>gi|225441131|ref|XP_002265601.1| PREDICTED: thaumatin-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 153/240 (63%), Positives = 176/240 (73%), Gaps = 3/240 (1%)

Query: 6   SISSLLLLLLIISGGQSEVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPW 65
           ++ +LLL+ L+I+GG S       NQC YTVWLAASP  GD   E  P TL IF  P+ W
Sbjct: 5   ALFNLLLIFLVITGGSSVQYFYYLNQCPYTVWLAASPGIGDLMPERPPYTLYIFPTPDQW 64

Query: 66  TGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVSYEVSL 125
            GSIWARTKCS + S +FSCETGDCG+G +DCQ P P+YPVTLLN  I+ +S VSYEVSL
Sbjct: 65  NGSIWARTKCSTDASLHFSCETGDCGSGTIDCQSPPPKYPVTLLNFDID-QSVVSYEVSL 123

Query: 126 NHGFN-VPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCD 184
           NHG+N VP+RI P GGTL  RS   CP VDCI DLSNVC   LVA NK+G  V C SPCD
Sbjct: 124 NHGYNDVPVRIEPIGGTLEGRS-DKCPTVDCIQDLSNVCPSTLVAKNKDGWAVGCFSPCD 182

Query: 185 ALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244
           A +D +FCCT NFSGQACQPN+YSK+FK+LCGLAHTYPAD  P  Y C  A  YN+TFCP
Sbjct: 183 AFKDPQFCCTGNFSGQACQPNEYSKRFKELCGLAHTYPADKTPEIYRCKDAATYNITFCP 242




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556824|ref|XP_002519445.1| Protein P21, putative [Ricinus communis] gi|223541308|gb|EEF42859.1| Protein P21, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356537001|ref|XP_003537020.1| PREDICTED: thaumatin-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|359481935|ref|XP_003632694.1| PREDICTED: LOW QUALITY PROTEIN: thaumatin-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|388500086|gb|AFK38109.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|190613907|gb|ACE80957.1| putative allergen Pru p 2.01A [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information
>gi|225637998|gb|ACN97419.1| thaumatin-like protein [Pyrus pyrifolia] Back     alignment and taxonomy information
>gi|359744030|gb|AEV57471.1| thaumatin-like protein 2 [Prunus persica] Back     alignment and taxonomy information
>gi|25091405|sp|P83332.1|TLP1_PRUPE RecName: Full=Thaumatin-like protein 1; AltName: Full=PpAZ44; Flags: Precursor gi|19879968|gb|AAM00216.1|AF362988_1 thaumatin-like protein [Prunus persica] Back     alignment and taxonomy information
>gi|190613905|gb|ACE80956.1| putative allergen Pru du 2.01A [Prunus dulcis x Prunus persica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query245
UNIPROTKB|P83332246 P83332 "Thaumatin-like protein 0.971 0.967 0.350 2.3e-39
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.885 0.857 0.376 2.6e-38
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.902 0.734 0.355 4.3e-38
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.853 0.856 0.364 3.9e-37
UNIPROTKB|P83335242 P83335 "Thaumatin-like protein 0.897 0.909 0.360 8e-37
UNIPROTKB|Q9FSG7246 TL1 "Thaumatin-like protein 1a 0.869 0.865 0.362 1.7e-36
UNIPROTKB|P83336212 P83336 "Thaumatin-like protein 0.722 0.834 0.4 9.2e-36
TAIR|locus:2121204281 AT4G38670 [Arabidopsis thalian 0.881 0.768 0.347 1.5e-35
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.877 0.826 0.344 1.9e-35
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.857 0.664 0.342 3.1e-35
UNIPROTKB|P83332 P83332 "Thaumatin-like protein 1" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 88/251 (35%), Positives = 121/251 (48%)

Query:     1 MENKAXXXXXXXXXXXXXGGQSEVILNIENQCSYTVWLAA-----SPSSGDFNSEHAPGT 55
             M+++A              G     +   N+CSYTVW         P       E A G 
Sbjct:     2 MKSQAALLGLTTLAILFFSGAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGI 61

Query:    56 LEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSI-N 114
                   P PW+G  + RT+CS + S  F+C T DCG+GQV C G     P TL+ ++I +
Sbjct:    62 SRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIAS 121

Query:   115 NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNG 174
             N  +  Y+VSL  GFN+P+ + P GGT        C    C AD++ VC   L     +G
Sbjct:   122 NGGQDFYDVSLVDGFNLPMSVAPQGGT------GKCKASTCPADINKVCPAPLQVKGSDG 175

Query:   175 SYVACNSPCDALRDARFCCTE-NFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCG 233
             S +AC S C A    ++CCT  N   + C P  YSK FK  C  A++Y  D+   T++C 
Sbjct:   176 SVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCS 235

Query:   234 GANRYNVTFCP 244
             G   Y +TFCP
Sbjct:   236 GRPAYLITFCP 246




GO:0005575 "cellular_component" evidence=ND
GO:0006952 "defense response" evidence=IEP
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms
UNIPROTKB|P83335 P83335 "Thaumatin-like protein 2" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FSG7 TL1 "Thaumatin-like protein 1a" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
UNIPROTKB|P83336 P83336 "Thaumatin-like protein 1b" [Malus x domestica (taxid:3750)] Back     alignment and assigned GO terms
TAIR|locus:2121204 AT4G38670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
OsI_14801
Os04g0165000 (275 aa)
(Oryza sativa Indica)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 4e-57
pfam00314212 pfam00314, Thaumatin, Thaumatin family 2e-54
smart00205218 smart00205, THN, Thaumatin family 4e-47
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 8e-21
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 9e-21
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 2e-19
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 1e-14
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  180 bits (460), Expect = 4e-57
 Identities = 78/226 (34%), Positives = 106/226 (46%), Gaps = 14/226 (6%)

Query: 25  ILNIENQCSYTVWLAASPSSGDFNSEH-----APGTLEIFSMPEPWTGSIWARTKCSNNE 79
              I N+C +TVW     ++G           APG       P  W+G  W RT CS + 
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 80  SFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEVS-YEVSLNHGFNVPIRIRPD 138
           S   SC TGDCG G ++C G     P TL   ++        Y+VSL  G+N+P+ I P 
Sbjct: 61  SGKGSCATGDCG-GGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQ 119

Query: 139 GGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFS 198
           GG+        C    C+ADL+ VC  EL   N  G  VAC S C A     +CC   + 
Sbjct: 120 GGS------GGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYG 173

Query: 199 G-QACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFC 243
             + C+P  YS+ FK  C  A++Y  D+   T++C     Y +TFC
Sbjct: 174 TPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 245
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 98.05
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.89
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 95.47
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=1.7e-82  Score=557.20  Aligned_cols=209  Identities=38%  Similarity=0.832  Sum_probs=198.3

Q ss_pred             EEEEEeCCCCceeceeec-------CCCCeeccCCCCceEEEEcCCCCceeEeeeeccCCCCCCccccccCccCCCcccc
Q 026012           25 ILNIENQCSYTVWLAASP-------SSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVDC   97 (245)
Q Consensus        25 t~tv~N~C~~tVwp~~~p-------~~~g~~L~~~~G~s~~~~vp~~WsGriwaRtgCs~~~~g~~~C~TGdCg~g~~~C   97 (245)
                      +|||+|+|+||||||+++       ..+||+|  ++|++++|+||.+|+|||||||+|++|+.|++.|+||||+ |.|+|
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L--~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCg-g~l~C   77 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFEL--APGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCG-GGLEC   77 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEc--CCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCC-Ceeec
Confidence            599999999999999964       3589999  9999999999999999999999999999999999999999 99999


Q ss_pred             CCCCCCCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCce
Q 026012           98 QGPMPRYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSY  176 (245)
Q Consensus        98 ~g~~~~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~~  176 (245)
                      ++.+++||+|||||||+ .+++|||||||||||||||+|+|+++.      +.|+.++|.+|||..||.|||+++.+|++
T Consensus        78 ~g~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~------~~C~~~~C~~din~~CP~~L~v~~~~g~v  151 (219)
T cd09218          78 NGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGS------GGCRTAGCVADLNAVCPAELQVKNSGGRV  151 (219)
T ss_pred             CCCCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCC------CCCCCCcccCcccccCCHHHeeccCCCcE
Confidence            98888999999999998 668899999999999999999998653      37999999999999999999999888999


Q ss_pred             eeecCCccccCCCCcccCC--CCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCceEEEec
Q 026012          177 VACNSPCDALRDARFCCTE--NFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFC  243 (245)
Q Consensus       177 v~C~SaC~~~~~~~yCC~g--~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~y~VtFC  243 (245)
                      |||||||.+|++|||||+|  ++| ++|+|+.||++||++||+||+|||||++|+|+|+++++|+||||
T Consensus       152 v~C~SaC~~f~~~~~CC~g~~~~p-~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         152 VACKSACLAFNTDEYCCRGAYGTP-ETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             eeecCHHHhhCCccceecCCCCCC-CcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999999999999  677 89999999999999999999999999999999998899999999



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 2e-34
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 7e-30
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 9e-26
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 1e-25
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 4e-25
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 9e-25
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 1e-24
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 1e-24
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 1e-24
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 1e-24
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 2e-24
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 4e-24
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 6e-24
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 3e-23
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 2e-22
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 7e-11
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 121/228 (53%), Gaps = 17/228 (7%) Query: 26 LNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFS-------MPEPWTGSIWARTKCSNN 78 + N C TVW +GD + + E+ S P PW+G W RT+CS + Sbjct: 3 ITFTNNCPNTVWPGTL--TGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTD 60 Query: 79 ESFYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSI-NNKSEVSYEVSLNHGFNVPIRIRP 137 + F+CET DCG+GQV C G P TL+ ++I N + Y+VSL GFN+P+ + P Sbjct: 61 AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAP 120 Query: 138 DGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCT-EN 196 GGT C C A+++ VC L +GS ++C S C A D+++CCT N Sbjct: 121 QGGT------GECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPN 174 Query: 197 FSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244 + + C P +YS+ F++ C A++Y D+ T++C G Y +TFCP Sbjct: 175 NTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query245
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 4e-45
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 5e-40
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 3e-34
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 4e-34
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 3e-33
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 1e-22
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  150 bits (378), Expect = 4e-45
 Identities = 78/226 (34%), Positives = 103/226 (45%), Gaps = 13/226 (5%)

Query: 26  LNIENQCSYTVWLAASPSSGDFNSEH-----APGTLEIFSMPEPWTGSIWARTKCSNNES 80
           ++ +N C Y VW     S             A         P PW G  WART CS + S
Sbjct: 3   ISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 62

Query: 81  FYFSCETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSEV-SYEVSLNHGFNVPIRIRPDG 139
             F C T DC +GQV C G     P TL   +I        Y+VSL  GFN+P+ + P G
Sbjct: 63  GKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQG 122

Query: 140 GTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSG 199
           GT        C    C A+++ VC  EL     +GS VAC S C      ++CCT   + 
Sbjct: 123 GT------GDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNT 176

Query: 200 -QACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244
            + C P  YS+ F   C  A++Y  D+   T++C G   Y +TFCP
Sbjct: 177 PETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 94.07
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=6.4e-87  Score=585.24  Aligned_cols=212  Identities=38%  Similarity=0.793  Sum_probs=202.4

Q ss_pred             eEEEEEeCCCCceeceeec-------CCCCeeccCCCCceEEEEcCCCCceeEeeeeccCCCCCCccccccCccCCCccc
Q 026012           24 VILNIENQCSYTVWLAASP-------SSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFSCETGDCGTGQVD   96 (245)
Q Consensus        24 ~t~tv~N~C~~tVwp~~~p-------~~~g~~L~~~~G~s~~~~vp~~WsGriwaRtgCs~~~~g~~~C~TGdCg~g~~~   96 (245)
                      ++|||+|+|+|||||++++       ..+||+|  ++|++++|.+|.+|+|||||||+|+||+.|+++|+||||++|.|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L--~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~   78 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFEL--ASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVM   78 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCB--CTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSS
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEc--CCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCcee
Confidence            5899999999999999964       5789999  999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCc
Q 026012           97 CQGPMPRYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGS  175 (245)
Q Consensus        97 C~g~~~~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~  175 (245)
                      |++.+++||+|||||+|+ .+++|||||||||||||||+|+|+++.+      .|+.++|.+|||..||.|||+++.+|+
T Consensus        79 C~g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~------~C~~~~C~~dln~~CP~eL~v~~~~G~  152 (222)
T 2ahn_A           79 CNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG------DCKTASCPANVNAVCPSELQKKGSDGS  152 (222)
T ss_dssp             CTTCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBS------CCCCEEECSCGGGGCCGGGEEECTTSC
T ss_pred             cCCCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCC------CcccCcccCchhhhCCHHHeeecCCCc
Confidence            999889999999999999 6689999999999999999999987643      799999999999999999999988899


Q ss_pred             eeeecCCccccCCCCcccCC--CCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCCCceEEEecC
Q 026012          176 YVACNSPCDALRDARFCCTE--NFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP  244 (245)
Q Consensus       176 ~v~C~SaC~~~~~~~yCC~g--~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~~~y~VtFCP  244 (245)
                      +|||||||++|++|||||+|  ++| ++|+|++||++||++||+||||||||++|||+|+++++|+|||||
T Consensus       153 ~v~C~saC~af~~~~yCC~g~~~~p-~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          153 VVACLSACVKFGTPQYCCTPPQNTP-ETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             EEEECCHHHHHCCHHHHCCTTSCST-TTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             EecccccccccCCCccccCCCCCCC-CCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            99999999999999999999  677 999999999999999999999999999999999988899999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 245
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 3e-47
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-44
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 4e-43
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  153 bits (388), Expect = 3e-47
 Identities = 70/221 (31%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 25  ILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPWTGSIWARTKCSNNESFYFS 84
           +  + NQC +TVW A+ P  G         +  I +        IWART C  + S   S
Sbjct: 2   VFTVVNQCPFTVWAASVPVGGGRQLNR-GESWRITAPAGTTAARIWARTGCKFDASGRGS 60

Query: 85  CETGDCGTGQVDCQGPMPRYPVTLLNLSINNKSE-VSYEVSLNHGFNVPIRIRPDGGTLV 143
           C TGDCG G + C G   R P TL   ++   +    +++SL  GFNVP+   PDGG+  
Sbjct: 61  CRTGDCG-GVLQCTGY-GRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGS-- 116

Query: 144 DRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACNSPCDALRDARFCCTENFSGQACQ 203
                      C  D++  C  EL           CN+ C   +   +CC  + +   C 
Sbjct: 117 ----GCSRGPRCAVDVNARCPAELRQD------GVCNNACPVFKKDEYCCVGSAAN-DCH 165

Query: 204 PNQYSKKFKQLCGLAHTYPADNNPPTYSCGGANRYNVTFCP 244
           P  YS+ FK  C  A++YP D+   T++C     Y V FCP
Sbjct: 166 PTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206


>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query245
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=4.2e-81  Score=541.64  Aligned_cols=204  Identities=33%  Similarity=0.716  Sum_probs=192.2

Q ss_pred             ceEEEEEeCCCCceeceeecCCCCeeccCCCCceEEEEcCCCC-ceeEeeeeccCCCCCCccccccCccCCCccccCCCC
Q 026012           23 EVILNIENQCSYTVWLAASPSSGDFNSEHAPGTLEIFSMPEPW-TGSIWARTKCSNNESFYFSCETGDCGTGQVDCQGPM  101 (245)
Q Consensus        23 ~~t~tv~N~C~~tVwp~~~p~~~g~~L~~~~G~s~~~~vp~~W-sGriwaRtgCs~~~~g~~~C~TGdCg~g~~~C~g~~  101 (245)
                      +++|||+|+|+|||||+++|..+||+|  ++|++++|.+|++| +|||||||+|+||+.|++.|+||||+ |.|+|++. 
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~~gg~~L--~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCg-g~l~C~~~-   76 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPVGGGRRL--ERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCG-GVLECKGW-   76 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETTTEEEEE--CTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCT-TBSSCSSC-
T ss_pred             CCEEEEEeCCCCCcccccccCCCCccc--CCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcC-CeEecCCC-
Confidence            368999999999999999998899999  99999999999998 69999999999999999999999999 99999984 


Q ss_pred             CCCCceEEEEEec-CCCCceeeeeccCccCCCceeecCCCCcCCCCCCCCCcccccccccccCCcccccccCCCceeeec
Q 026012          102 PRYPVTLLNLSIN-NKSEVSYEVSLNHGFNVPIRIRPDGGTLVDRSGSSCPVVDCIADLSNVCAPELVATNKNGSYVACN  180 (245)
Q Consensus       102 ~~~paTlaEftl~-~~~~d~YDVSlVdGfNlP~~i~p~~~~~~~~~~~~C~~~~C~~dl~~~CP~~l~~~~~~g~~v~C~  180 (245)
                      ++||+|||||||+ .+++|||||||||||||||+|+|+++.     ...|+.++|.+|||..||.|||+++      ||+
T Consensus        77 G~pP~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~-----~~~C~~~~C~~dln~~CP~~L~v~~------~C~  145 (208)
T d1auna_          77 GKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPG-----PGKCHGIQCTANINGECPGSLRVPG------GCN  145 (208)
T ss_dssp             CCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCC-----STTCSCEEECSCHHHHCCTTTEETT------EEC
T ss_pred             CCCCcceEEEEeccCCCcceeccccccccccceEEeccCCC-----CCCcCcccccCCccccCCHhhccCC------CCc
Confidence            7899999999999 778999999999999999999998643     2479999999999999999999976      899


Q ss_pred             CCccccCCCCcccCCCCCCCCCCCchhHHHHHhhccccccCCCCCCCCceeeCCC-CceEEEecCC
Q 026012          181 SPCDALRDARFCCTENFSGQACQPNQYSKKFKQLCGLAHTYPADNNPPTYSCGGA-NRYNVTFCPL  245 (245)
Q Consensus       181 SaC~~~~~~~yCC~g~~~~~~C~~t~ys~~fK~~CP~AYsya~DD~tstftC~~~-~~y~VtFCP~  245 (245)
                      |+|.+|++|||||+.    ++|+|++|+++||++||+||||||||++|||+|+++ ++|+|||||.
T Consensus       146 saC~~~~~~~~CCt~----~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~  207 (208)
T d1auna_         146 NPCTTFGGQQYCCTQ----GPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPY  207 (208)
T ss_dssp             CHHHHTCSHHHHCTT----SCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTT
T ss_pred             cceeecCCCccccCC----CcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCC
Confidence            999999999999985    789999999999999999999999999999999865 8999999995



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure