Citrus Sinensis ID: 026047

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
Protein Sequence
MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMASSAISAFAAVSLL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHHHHHcccHHHHHHHHcccccccEEEccccHHHHcccccHHHcccHHHHHHHHccccccccccHHHHHHHcccccccccccccccccEEEEEcccEEEEEEccEEEEEEEEEEEcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHcccccEEEEccccHHHHHccccccccccHHHHHHHHHHHccccEccHHHccccccccEEEccccccccEEEEEEccccEEEEEccEEEEEEEEEEEccccEEEEEEccEEccHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MTKPFCFMFFLLLVSLLHCIKtsaqvpaaalsgppnITAILEKGGQFTSFIRLLEntqqddqintqlnnsnqgltvfaptdnafanlksgtinslsdqQKVQLVQFhilptsmstsqfqtasnplrtqagnsndgefplnvttsgnqvnlttgvneATVANTVFSGSNLAVYQVDQVllpldlfgsqapapapstpekdvpvaatpkgsstdasvdtsRALSLNHLALTMASSAISAFAAVSLL
Flexible Loop (DISEMBL)
MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDVPVAATpkgsstdasvDTSRALSLNHLALTMASSAISAFAAVSLL
Low Complexity Region (SEG)
MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMassaisafaavsLL
Disordered region (IsUnstruct)
****FCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENT***************GLTVFAPTDNAFANLKSGTIN*****QKVQLVQFHIL************************************NQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF*****************************************LAL****************
Disordered Region (DISOPRED)
******FMFFLLLVSLLHCI****************ITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQ*************NSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL********************************************LALTMASSAISAFAAVSLL
Disordered Region (DISEMBL)
MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSM*********NPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQA****************************TSRALSLNHLALTMASSAISAFAAVSLL
Disordered Region (DISPRO)
*TKPFCFMFFLLLVSLLHCIKT**********GPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQ**********************************SLNHLALTMASSAISAFAAVSLL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMASSAISAFAAVSLL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	244	2.2.26 [Sep-21-2011]
Q8LEJ6	246	Fasciclin-like arabinogal	yes	no	0.790	0.784	0.682	1e-66
Q8LEE9	249	Fasciclin-like arabinogal	no	no	0.610	0.598	0.617	2e-49
Q9ZWA8	247	Fasciclin-like arabinogal	no	no	0.737	0.728	0.459	3e-39
Q9SIL7	247	Fasciclin-like arabinogal	no	no	0.766	0.757	0.471	8e-39
Q9FFH6	247	Fasciclin-like arabinogal	no	no	0.704	0.696	0.480	1e-38
Q9LZX4	422	Fasciclin-like arabinogal	no	no	0.663	0.383	0.375	2e-18
Q9SJ81	254	Fasciclin-like arabinogal	no	no	0.602	0.578	0.359	3e-18
O22126	420	Fasciclin-like arabinogal	no	no	0.672	0.390	0.345	1e-16
Q9SNC3	420	Fasciclin-like arabinogal	no	no	0.663	0.385	0.311	2e-12
Q9SU13	403	Fasciclin-like arabinogal	no	no	0.676	0.409	0.316	9e-11

>sp|Q8LEJ6|FLA11_ARATH Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2

 Score =  253 bits (645), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 133/195 (68%), Positives = 153/195 (78%), Gaps = 2/195 (1%)

Query: 1   MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQD 60
           M     F+F  L +  L    T  Q PA   SGP NITAILEK GQFT FIRLL++TQ  
Sbjct: 1   MATSRTFIFSNLFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQAS 60

Query: 61  DQINTQLNNSNQ-GLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQ 119
           DQINTQLN+S+  GLTVFAPTDNAF +LKSGT+NSLSDQQKVQLVQFH+LPT ++  QFQ
Sbjct: 61  DQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQ 120

Query: 120 TASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLL 179
           T SNPLRTQAG+  +G+FPLN+T+SGNQVN+TTGV  ATVAN+V+S   LAVYQVDQVLL
Sbjct: 121 TVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLL 180

Query: 180 PLDLFGSQ-APAPAP 193
           PL +FGS  APAPAP
Sbjct: 181 PLAMFGSSVAPAPAP 195

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2

 Score =  196 bits (497), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/149 (61%), Positives = 122/149 (81%)

Query: 36  NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL 95
           N+T ILEK GQFT FIRLL++T   +Q+  QLNNS+ G+T+FAP+D++F  LK+GT+NSL
Sbjct: 39  NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSL 98

Query: 96  SDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVN 155
           +D+Q+V+L+QFH++P+ +S+S FQT SNPLRTQAG+S DG FPLNVTTSGN VN+T+GV 
Sbjct: 99  TDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVT 158

Query: 156 EATVANTVFSGSNLAVYQVDQVLLPLDLF 184
             TV+  V+S   LAVYQVD+VLLP  +F
Sbjct: 159 NTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1

 Score =  161 bits (408), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/187 (45%), Positives = 118/187 (63%), Gaps = 7/187 (3%)

Query: 36  NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL 95
           N+TAILEKGGQFT+FI LL  TQ   Q+N Q+N+S++G+TVFAPTDNAF NLK GT+N L
Sbjct: 39  NLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQL 98

Query: 96  SDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVN 155
           S   +V+L+ +H+ P   S     + SNP+RTQA   ++G + LN T   NQ+N++TG  
Sbjct: 99  SPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYV 158

Query: 156 EATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDVPVAATPKGSSTDASV 215
           E  ++N++     LAVY VD VLLP ++FG    +P    P+       +  G  TD S 
Sbjct: 159 ETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLSPIAPAPK-------SKSGGVTDDSG 211

Query: 216 DTSRALS 222
            T +A S
Sbjct: 212 STKKAAS 218

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2

 Score =  160 bits (405), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 124/195 (63%), Gaps = 8/195 (4%)

Query: 5   FCFMFFLLLVSLLHCIKTSAQVPAAALSGPP-NITAILEKGGQFTSFIRLLENTQQDDQI 63
           F ++  L+ +  +  I++    PA      P N+TAILE G QFT+ I+LL  TQ   Q+
Sbjct: 6   FSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQV 65

Query: 64  NTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASN 123
           + QLN+S+QG+T+FAPTDNAF  LK GT+NSL+ QQ++QL+ +HI+P   S S    ASN
Sbjct: 66  SVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASN 125

Query: 124 PLRTQAGNSNDGEFPLNVT--TSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL 181
           P+RTQA   + G F LN T     NQVN++TGV E  + N +     LAVY VD VLLP 
Sbjct: 126 PVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPE 185

Query: 182 DLFGSQ-----APAP 191
           +LFG++     APAP
Sbjct: 186 ELFGTKTTPTGAPAP 200

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1

 Score =  160 bits (404), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 11/183 (6%)

Query: 36  NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL 95
           NITAILEKGGQF + IRLL  TQ  +QIN Q+N+S++G+TV APTDNAF NLK GT+N L
Sbjct: 36  NITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKL 95

Query: 96  SDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQA-GNSNDGEFPLNVTTSGNQVNLTTGV 154
           S   +V+L+ +H+ P   +     + SNP+RTQA G    G + LN T  GNQVN++TGV
Sbjct: 96  SPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGV 155

Query: 155 NEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDVPVAATPKGSSTDAS 214
            E  ++ ++     LAVY VD VLLP ++FG +          K  P+A  PK  S D S
Sbjct: 156 VETRLSTSLRQERPLAVYVVDMVLLPEEMFGER----------KISPMAPPPKSKSPDVS 205

Query: 215 VDT 217
            D+
Sbjct: 206 DDS 208

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 95/168 (56%), Gaps = 6/168 (3%)

Query: 27  PAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFAN 86
           PA + +G  NIT +LEK G  T F  LL ++     I T  +   +GLTVFAP+D AF  
Sbjct: 181 PAPSSAGVSNITGLLEKAGCKT-FANLLVSS---GVIKTFESTVEKGLTVFAPSDEAFKA 236

Query: 87  LKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGN 146
                + +L+  + V L+++H L         +T  + + T A N   G++ L  +TSG+
Sbjct: 237 RGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATN-GAGKYDLTTSTSGD 295

Query: 147 QVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFG-SQAPAPAP 193
           +V L TGV  + +A+TV   + + ++ VD VLLP +LFG S +PAPAP
Sbjct: 296 EVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKSSSPAPAP 343

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 6/153 (3%)

Query: 36  NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL 95
           N+T +L   G F +F+  L +T   +    Q NN+ +G+T+F P D+AF   K+  +++L
Sbjct: 46  NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105

Query: 96  SDQQKVQLVQFHILPTSMSTSQFQ--TASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTG 153
           +  Q  QLV FH LP   S S+F+  + S P+ T AG    G++ L  T     V + + 
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAG----GQYSLKFTDVSGTVRIDSL 161

Query: 154 VNEATVANTVFSGSNLAVYQVDQVLLPLDLFGS 186
                V+++VFS   +AVYQV++VLLP  +FG+
Sbjct: 162 WTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGT 194

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 21/185 (11%)

Query: 23  SAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDN 82
           +A  P+A+LS   NIT +LEK G  T F  LL ++     + T  +   +GLTVFAP+D 
Sbjct: 179 TAPAPSASLS---NITGLLEKAGCKT-FANLLVSS---GVLKTYESAVEKGLTVFAPSDE 231

Query: 83  AFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVT 142
           AF       +  L+  + V L+++H L         +T  N + T A N   G+F L  +
Sbjct: 232 AFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATN-GAGKFDLTTS 290

Query: 143 TSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQ-------------AP 189
           TSG++V L TGV  + +A+TV   + + ++ VD VLLP +LFG               AP
Sbjct: 291 TSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPAPEPVTAP 350

Query: 190 APAPS 194
            P+P+
Sbjct: 351 TPSPA 355

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 24/186 (12%)

Query: 30  ALSGPP---NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQG--LTVFAPTDNAF 84
           +LS PP   N+T IL  G  F   + LL  +     + T+  N  +G  +TVF PTD+AF
Sbjct: 198 SLSPPPAGINLTQILINGHNFNVALSLLVASG----VITEFENDERGAGITVFVPTDSAF 253

Query: 85  ANLKSGT-INSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSN--DGEFPLNV 141
           ++L S   + SL  +QK  +++FH+L +  +    ++ +NP++          G + LN+
Sbjct: 254 SDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNI 313

Query: 142 T-TSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEKDV 200
           +  +G+ V + +GV  A V  T F  + ++V+ V +VLLP +LF           P+   
Sbjct: 314 SRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELF-----------PKSGQ 362

Query: 201 PVAATP 206
           PVA  P
Sbjct: 363 PVATAP 368

May be a cell surface adhesion protein that is required for normal cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1

 Score = 67.4 bits (163), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 9/174 (5%)

Query: 14  VSLLHCIKTSAQVPAAALSGPPN---ITAILEKGGQFTSFIRLLENTQQDDQINTQLNNS 70
           +S+LH  +      A A +  P+   +T ILEK G   +F  +L++T  D    T  +  
Sbjct: 165 ISVLHISQVLTSPEAEAPTASPSDLILTTILEKQG-CKAFSDILKSTGAD---KTFQDTV 220

Query: 71  NQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAG 130
           + GLTVF P+D+A          SLS   K  LV +H +P   S    ++ +  + T A 
Sbjct: 221 DGGLTVFCPSDSAVGKFMP-KFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLAT 279

Query: 131 NSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF 184
             N+ +F   V   G  V L T V  A V  T+     L VY++D+VLLP +++
Sbjct: 280 EGNN-KFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIY 332

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
47717925	238	fasciclin-like AGP 11 [Populus tremula x	0.930	0.953	0.687	1e-79
224140183	239	predicted protein [Populus trichocarpa]	0.967	0.987	0.676	5e-76
47717929	239	fasciclin-like AGP 13 [Populus tremula x	0.967	0.987	0.663	2e-74
224069410	227	predicted protein [Populus trichocarpa]	0.918	0.986	0.694	2e-74
255557028	241	conserved hypothetical protein [Ricinus	0.954	0.966	0.608	4e-70
21553523	246	arabinogalactan protein-like [Arabidopsi	0.745	0.739	0.7	4e-65
15242651	246	fasciclin-like arabinogalactan protein 1	0.790	0.784	0.682	6e-65
297810387	246	hypothetical protein ARALYDRAFT_487087 [	0.758	0.752	0.690	1e-64
449450982	248	PREDICTED: fasciclin-like arabinogalacta	0.938	0.923	0.630	2e-64
225435279	244	PREDICTED: fasciclin-like arabinogalacta	0.643	0.643	0.751	4e-62

>gi|47717925|gb|AAT37954.1| fasciclin-like AGP 11 [Populus tremula x Populus alba]

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/237 (68%), Positives = 185/237 (78%), Gaps = 10/237 (4%)

Query: 7   FMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQ 66
           F+ FL+L   L+     AQ P+ A SGP NITAIL K GQFT+ IRLL++TQ+ DQINTQ
Sbjct: 10  FVPFLML--FLYSSTAFAQTPSPAPSGPTNITAILAKAGQFTTLIRLLKSTQEADQINTQ 67

Query: 67  LNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLR 126
           LNNSNQGLTVFAPTDN+FANLK+GT+NSLSDQQKVQLVQFHILP  +S S FQT SNPLR
Sbjct: 68  LNNSNQGLTVFAPTDNSFANLKAGTLNSLSDQQKVQLVQFHILPNFLSMSNFQTVSNPLR 127

Query: 127 TQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGS 186
           TQAGNS DGEFPLNVTTSGNQVN+TTGV+ ATVANT+++   L VYQVDQVLLPLDLFG+
Sbjct: 128 TQAGNSADGEFPLNVTTSGNQVNITTGVDTATVANTIYTDGQLVVYQVDQVLLPLDLFGT 187

Query: 187 QAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMASSAISAFAAVSL 243
            APAPAPS PEKDVP  A P GS  DASVD S A      ++   S  +   AA+SL
Sbjct: 188 -APAPAPSKPEKDVPAKA-PAGSKEDASVDASGA------SIATVSFGVVLIAAISL 236

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140183|ref|XP_002323464.1| predicted protein [Populus trichocarpa] gi|118481435|gb|ABK92660.1| unknown [Populus trichocarpa] gi|222868094|gb|EEF05225.1| predicted protein [Populus trichocarpa]

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 165/244 (67%), Positives = 186/244 (76%), Gaps = 8/244 (3%)

Query: 1   MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQD 60
           M K     F   L+  L+   T AQ P+ A SGP NITAIL K GQFT+ IRLL++TQ+ 
Sbjct: 1   MRKQLLSPFVPFLMFFLYSSTTFAQTPSPAPSGPTNITAILAKAGQFTTLIRLLKSTQEA 60

Query: 61  DQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQT 120
           DQINTQLNNSNQGLTVFAPTDN+FANLK+GT+NSLSDQQKVQLVQFHILP  +S S FQT
Sbjct: 61  DQINTQLNNSNQGLTVFAPTDNSFANLKAGTLNSLSDQQKVQLVQFHILPNFLSMSNFQT 120

Query: 121 ASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
            SNPLRTQAGNS DGEFPLNVTTSGNQVN+TTGVN ATVANT+++   L VYQVDQVLLP
Sbjct: 121 VSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATVANTIYTDGQLVVYQVDQVLLP 180

Query: 181 LDLFGS-QAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMASSAISAFA 239
           LDLFG+  APAPAPS PEKDVP  A P GS  DASVD+S A      ++   S  +   A
Sbjct: 181 LDLFGTAPAPAPAPSKPEKDVPAKA-PAGSKEDASVDSSGA------SIATVSFGVVLIA 233

Query: 240 AVSL 243
           A+SL
Sbjct: 234 AISL 237

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47717929|gb|AAT37956.1| fasciclin-like AGP 13 [Populus tremula x Populus alba]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/244 (66%), Positives = 183/244 (75%), Gaps = 8/244 (3%)

Query: 1   MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQD 60
           M K     F   L+  L+   T AQ P+ A SGP NITAILEK GQFT+ IRL+++TQ+ 
Sbjct: 1   MRKQLLSPFVPFLMFFLYSSTTVAQTPSPAPSGPTNITAILEKAGQFTTLIRLMKSTQEA 60

Query: 61  DQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQT 120
           DQINTQLNNSNQGLTVFAP DNAFANLK+G +NSLSDQQKVQLVQFHI+P  +S S FQT
Sbjct: 61  DQINTQLNNSNQGLTVFAPPDNAFANLKAGALNSLSDQQKVQLVQFHIIPNFLSMSSFQT 120

Query: 121 ASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
            SNPLRTQAGNS DGEFPLNVTTSGNQVN+TTGVN ATVANT+F+   L VYQVDQVLLP
Sbjct: 121 VSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATVANTIFTDGQLVVYQVDQVLLP 180

Query: 181 LDLFGS-QAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMASSAISAFA 239
           LDLFG+  APAPAPS P+KDVP  A P GS  DAS D S A       +   S ++   A
Sbjct: 181 LDLFGTAAAPAPAPSKPDKDVPAKA-PAGSKEDASADASGA------TIATVSVSLVLIA 233

Query: 240 AVSL 243
           A+SL
Sbjct: 234 AISL 237

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069410|ref|XP_002326348.1| predicted protein [Populus trichocarpa] gi|222833541|gb|EEE72018.1| predicted protein [Populus trichocarpa]

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/226 (69%), Positives = 176/226 (77%), Gaps = 2/226 (0%)

Query: 1   MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQD 60
           M K     F   L+  L+   T AQ P+ A SGP NITAILEK GQFT+ IRL+++TQ+ 
Sbjct: 1   MRKQLLSPFVPFLMFFLYGSTTVAQTPSPAPSGPTNITAILEKAGQFTTLIRLMKSTQEA 60

Query: 61  DQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQT 120
           DQINTQLNNSNQGLTVFAP DNAF NLK+GT+NSLSDQQKVQLVQFHI+P   S S FQT
Sbjct: 61  DQINTQLNNSNQGLTVFAPPDNAFTNLKAGTLNSLSDQQKVQLVQFHIIPNFFSMSSFQT 120

Query: 121 ASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
            SNPLRTQAGNS DGEFPLNVTTSGNQVN+TTGVN ATVANT+F+   L VYQVDQVLLP
Sbjct: 121 VSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATVANTIFTDGQLVVYQVDQVLLP 180

Query: 181 LDLFGS-QAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNH 225
           LDLFG+  APAPAPS P+KDVP  A P GS  DASVD S +  ++ 
Sbjct: 181 LDLFGTAAAPAPAPSKPDKDVPAKA-PAGSKEDASVDASESKGVDE 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557028|ref|XP_002519547.1| conserved hypothetical protein [Ricinus communis] gi|223541410|gb|EEF42961.1| conserved hypothetical protein [Ricinus communis]

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 146/240 (60%), Positives = 180/240 (75%), Gaps = 7/240 (2%)

Query: 5   FCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQIN 64
           F  +F  L+   L C  +SAQ P+ + SGP NITAILEK GQFT+FI+L+ +TQ+  QIN
Sbjct: 6   FSSIFLFLMFVFLCCSTSSAQTPSPSPSGPTNITAILEKAGQFTTFIKLMMSTQEASQIN 65

Query: 65  TQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNP 124
           TQLNNSNQGLTVFAP DNAFANLK+GT+NSL+DQ+KVQL+QFHILPT +S SQFQT SNP
Sbjct: 66  TQLNNSNQGLTVFAPPDNAFANLKAGTLNSLTDQEKVQLMQFHILPTFISMSQFQTVSNP 125

Query: 125 LRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF 184
           LRTQAGNS +GEFPLNVTTSGNQVN+TTGV+ ATVANT+++  +LAVYQVD+VLLPLDLF
Sbjct: 126 LRTQAGNSANGEFPLNVTTSGNQVNVTTGVDTATVANTIYTDGSLAVYQVDKVLLPLDLF 185

Query: 185 GSQAPAPAPSTPEKDVPVAATPKGSSTDAS-VDTSRALSLNHLALTMASSAISAFAAVSL 243
            S A      +  K V     P  ++ D +  D+S A +      T+ S A++  AA+SL
Sbjct: 186 SSPAAPAPAPSEPKKVIQGKAPAATTADVTPADSSSATA------TVVSFAVAFIAAISL 239

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553523|gb|AAM62616.1| arabinogalactan protein-like [Arabidopsis thaliana]

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 133/190 (70%), Positives = 154/190 (81%), Gaps = 8/190 (4%)

Query: 6   CFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINT 65
            F+FFL+L +      T  Q PA   SGP NITAILEK GQFT FIRLL++TQ  DQINT
Sbjct: 12  LFIFFLVLAT------TYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINT 65

Query: 66  QLNNSNQ-GLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNP 124
           QLN+S+  GLTVFAPTDNAF +LKSGT+NSLSDQQKVQLVQFH+LPT ++  QFQT SNP
Sbjct: 66  QLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNP 125

Query: 125 LRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF 184
           LRTQAG+  +G+FPLN+T+SGNQVN+TTGV  ATVAN+V+S   LAVYQVDQVLLPL +F
Sbjct: 126 LRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF 185

Query: 185 GSQ-APAPAP 193
           GS  APAPAP
Sbjct: 186 GSSVAPAPAP 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242651|ref|NP_195937.1| fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana] gi|116247778|sp|Q8LEJ6.2|FLA11_ARATH RecName: Full=Fasciclin-like arabinogalactan protein 11; Flags: Precursor gi|13430542|gb|AAK25893.1|AF360183_1 putative arabinogalactan protein [Arabidopsis thaliana] gi|7413594|emb|CAB86084.1| arabinogalactan protein-like [Arabidopsis thaliana] gi|9757768|dbj|BAB08377.1| unnamed protein product [Arabidopsis thaliana] gi|14532750|gb|AAK64076.1| putative arabinogalactan protein [Arabidopsis thaliana] gi|332003180|gb|AED90563.1| fasciclin-like arabinogalactan protein 11 [Arabidopsis thaliana]

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 133/195 (68%), Positives = 153/195 (78%), Gaps = 2/195 (1%)

Query: 1   MTKPFCFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQD 60
           M     F+F  L +  L    T  Q PA   SGP NITAILEK GQFT FIRLL++TQ  
Sbjct: 1   MATSRTFIFSNLFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQAS 60

Query: 61  DQINTQLNNSNQ-GLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQ 119
           DQINTQLN+S+  GLTVFAPTDNAF +LKSGT+NSLSDQQKVQLVQFH+LPT ++  QFQ
Sbjct: 61  DQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQ 120

Query: 120 TASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLL 179
           T SNPLRTQAG+  +G+FPLN+T+SGNQVN+TTGV  ATVAN+V+S   LAVYQVDQVLL
Sbjct: 121 TVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLL 180

Query: 180 PLDLFGSQ-APAPAP 193
           PL +FGS  APAPAP
Sbjct: 181 PLAMFGSSVAPAPAP 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297810387|ref|XP_002873077.1| hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata] gi|297318914|gb|EFH49336.1| hypothetical protein ARALYDRAFT_487087 [Arabidopsis lyrata subsp. lyrata]

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/194 (69%), Positives = 158/194 (81%), Gaps = 9/194 (4%)

Query: 6   CFMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINT 65
            F+FFL++ +      T+ Q PA   SGP NITAILEK GQFT FIRLL++TQ  DQINT
Sbjct: 12  LFIFFLIVAT------TNGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINT 65

Query: 66  QLNNSN-QGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNP 124
           QLN+S+  GLTVFAPTDNAF +LKSGT+NSLSDQQKVQLVQFH+LPT ++  QFQT SNP
Sbjct: 66  QLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNP 125

Query: 125 LRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF 184
           LRTQAG+  +G+FPLN+T+SGNQVN+TTGV  ATVAN+V+S   LAVYQVDQVLLPL +F
Sbjct: 126 LRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF 185

Query: 185 GSQAPAPAPSTPEK 198
           GS A APAP+ PEK
Sbjct: 186 GSSA-APAPA-PEK 197

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450982|ref|XP_004143241.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Cucumis sativus] gi|449482503|ref|XP_004156302.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Cucumis sativus]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/241 (63%), Positives = 177/241 (73%), Gaps = 12/241 (4%)

Query: 5   FCFMFFLLLVSLLHCIKTSAQ-VPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQI 63
           F   FFL  +SLL     SAQ       SGP NI+AILEK GQF++  +LL++TQQ DQI
Sbjct: 6   FPISFFL--ISLLFSKSISAQSTQPPGFSGPTNISAILEKAGQFSTMNKLLKSTQQSDQI 63

Query: 64  NTQLNNSNQG--LTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTA 121
           N QLNNSNQG  LTVFAP DNAF+NLK GT+NSLSDQQKVQLVQ+H++PT +S SQFQT 
Sbjct: 64  NNQLNNSNQGQGLTVFAPPDNAFSNLKPGTLNSLSDQQKVQLVQYHVVPTFISMSQFQTV 123

Query: 122 SNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL 181
           SNPLRTQAGNSN G+FPLNVTTSG+QVNLTTGV +A VANT+++   LAVYQVD+VLLP+
Sbjct: 124 SNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVANTIYTDGQLAVYQVDKVLLPV 183

Query: 182 DLFGS-QAPAPAPSTPEKDVPVAATPKGSSTDASVDTSRALSLNHLALTMASSAISAFAA 240
           DLFG+  APAPAPS P K V  A  P G+S D S D S A      A  M+    +AF A
Sbjct: 184 DLFGTVAAPAPAPSKPVKAVSGADAPAGASKDTSSDDSGA------APAMSYRFAAAFGA 237

Query: 241 V 241
           V
Sbjct: 238 V 238

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435279|ref|XP_002285068.1| PREDICTED: fasciclin-like arabinogalactan protein 11-like [Vitis vinifera]

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 118/157 (75%), Positives = 139/157 (88%)

Query: 28  AAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANL 87
           A A SGP NIT ILEK GQ+T  IRL++ TQ  DQINTQLNNSNQGLTVFAPTDNAF+ L
Sbjct: 28  APAPSGPTNITQILEKAGQYTILIRLMKGTQVADQINTQLNNSNQGLTVFAPTDNAFSTL 87

Query: 88  KSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQ 147
           K+GT+NSL+DQQKVQL+QFH++P  +S SQFQT SNPLRTQAGNSN+GEFPLNVTTSGNQ
Sbjct: 88  KAGTLNSLTDQQKVQLIQFHVVPNFLSISQFQTVSNPLRTQAGNSNNGEFPLNVTTSGNQ 147

Query: 148 VNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF 184
           VN++TG+ +ATVANTV++ + LAVYQVD+VLLPLD+F
Sbjct: 148 VNVSTGIVDATVANTVYTDNQLAVYQVDKVLLPLDIF 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	244
TAIR|locus:2143443	246	FLA11 "FASCICLIN-like arabinog	0.868	0.861	0.642	3.7e-64
TAIR|locus:2175153	249	FLA12 "FASCICLIN-like arabinog	0.881	0.863	0.523	8.9e-54
TAIR|locus:2024122	247	FLA9 "FASCICLIN-like arabinoog	0.840	0.829	0.448	6.6e-42
TAIR|locus:2167664	247	FLA13 "AT5G44130" [Arabidopsis	0.848	0.838	0.447	1.2e-40
TAIR|locus:2054769	247	FLA6 "FASCICLIN-like arabinoga	0.864	0.854	0.454	2e-40
TAIR|locus:2049218	254	FLA7 "FASCICLIN-like arabinoog	0.819	0.787	0.346	1.4e-23
TAIR|locus:2050822	420	FLA8 "FASCICLIN-like arabinoga	0.75	0.435	0.380	1.1e-22
TAIR|locus:2101841	422	FLA10 "FASCICLIN-like arabinog	0.766	0.443	0.369	2.1e-21
TAIR|locus:2135818	403	FLA2 "FASCICLIN-like arabinoga	0.807	0.488	0.317	2.4e-17
TAIR|locus:2075185	420	SOS5 "salt overly sensitive 5"	0.737	0.428	0.311	2.8e-17

TAIR|locus:2143443 FLA11 "FASCICLIN-like arabinogalactan-protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 140/218 (64%), Positives = 162/218 (74%)

Query:     7 FMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQ 66
             F+F  L +  L    T  Q PA   SGP NITAILEK GQFT FIRLL++TQ  DQINTQ
Sbjct:     7 FIFSNLFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQ 66

Query:    67 LNNSNQ-GLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPL 125
             LN+S+  GLTVFAPTDNAF +LKSGT+NSLSDQQKVQLVQFH+LPT ++  QFQT SNPL
Sbjct:    67 LNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPL 126

Query:   126 RTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFG 185
             RTQAG+  +G+FPLN+T+SGNQVN+TTGV  ATVAN+V+S   LAVYQVDQVLLPL +FG
Sbjct:   127 RTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 186

Query:   186 SQ-APAPAPS---TPEKDVPVAATPKGSSTDASVDTSR 219
             S  APAPAP    +  K         G STD+S D  R
Sbjct:   187 SSVAPAPAPEKGGSVSKGSASGGDDGGDSTDSS-DAER 223

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2175153 FLA12 "FASCICLIN-like arabinogalactan-protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 113/216 (52%), Positives = 150/216 (69%)

Query:     7 FMFFLLLVSLLHCIKTSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQ 66
             F   LLL +    +   +   A A  GP N+T ILEK GQFT FIRLL++T   +Q+  Q
Sbjct:    10 FTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQ 69

Query:    67 LNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLR 126
             LNNS+ G+T+FAP+D++F  LK+GT+NSL+D+Q+V+L+QFH++P+ +S+S FQT SNPLR
Sbjct:    70 LNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLR 129

Query:   127 TQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGS 186
             TQAG+S DG FPLNVTTSGN VN+T+GV   TV+  V+S   LAVYQVD+VLLP  +F  
Sbjct:   130 TQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDP 189

Query:   187 QAPAPAPS-TPEKDVPVAATPKGSSTDASVDTSRAL 221
             + PAPAP+ +  K          SS D+  D S AL
Sbjct:   190 RPPAPAPAPSVSKSKKKKDDSDSSSDDSPADASFAL 225

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2024122 FLA9 "FASCICLIN-like arabinoogalactan 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 96/214 (44%), Positives = 133/214 (62%)

Query:    11 LLLVSLLHCIKTSAQ--VPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLN 68
             LL+ ++L   K +AQ   PA   +GP N+TAILEKGGQFT+FI LL  TQ   Q+N Q+N
Sbjct:    12 LLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQVN 71

Query:    69 NSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQ 128
             +S++G+TVFAPTDNAF NLK GT+N LS   +V+L+ +H+ P   S     + SNP+RTQ
Sbjct:    72 SSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDLLSVSNPVRTQ 131

Query:   129 AGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQA 188
             A   ++G + LN T   NQ+N++TG  E  ++N++     LAVY VD VLLP ++FG   
Sbjct:   132 ASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHK 191

Query:   189 PAPAPSTPEKDVPVAATPKGSSTDASVDTSRALS 222
              +P    P+       +  G  TD S  T +A S
Sbjct:   192 LSPIAPAPK-------SKSGGVTDDSGSTKKAAS 218

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2167664 FLA13 "AT5G44130" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 94/210 (44%), Positives = 130/210 (61%)

Query:     8 MFFLLLVSLLHCIKTSAQ--VPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINT 65
             +  LLL ++    + +AQ   PA   +GP NITAILEKGGQF + IRLL  TQ  +QIN 
Sbjct:     6 LLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIGNQINI 65

Query:    66 QLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPL 125
             Q+N+S++G+TV APTDNAF NLK GT+N LS   +V+L+ +H+ P   +     + SNP+
Sbjct:    66 QINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPV 125

Query:   126 RTQA-GNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF 184
             RTQA G    G + LN T  GNQVN++TGV E  ++ ++     LAVY VD VLLP ++F
Sbjct:   126 RTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMF 185

Query:   185 GSQAPAPAPSTPEKDVPVAATPKGSSTDAS 214
             G +  +P    P+   P  +    SS  A+
Sbjct:   186 GERKISPMAPPPKSKSPDVSDDSESSKKAA 215

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2054769 FLA6 "FASCICLIN-like arabinogalactan 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 100/220 (45%), Positives = 134/220 (60%)

Query:     5 FCFMFFLLLVSLLHCIKTSAQVPAAALSGPP-NITAILEKGGQFTSFIRLLENTQQDDQI 63
             F ++  L+ +  +  I++    PA      P N+TAILE G QFT+ I+LL  TQ   Q+
Sbjct:     6 FSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQV 65

Query:    64 NTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASN 123
             + QLN+S+QG+T+FAPTDNAF  LK GT+NSL+ QQ++QL+ +HI+P   S S    ASN
Sbjct:    66 SVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASN 125

Query:   124 PLRTQAGNSNDGEFPLNVT--TSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL 181
             P+RTQA   + G F LN T     NQVN++TGV E  + N +     LAVY VD VLLP 
Sbjct:   126 PVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPE 185

Query:   182 DLFGSQ-----APAPAPSTPEKDVPV-AATPKGSSTDASV 215
             +LFG++     APAP  ST   D    AA  +  S  +SV
Sbjct:   186 ELFGTKTTPTGAPAPKSSTSSSDADSPAADDEHKSAGSSV 225

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2049218 FLA7 "FASCICLIN-like arabinoogalactan 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 78/225 (34%), Positives = 119/225 (52%)

Query:    10 FLLLVSLLHCIKTS--AQVPAAALSGPP---------NITAILEKGGQFTSFIRLLENTQ 58
             F+ +V+L+ C  ++  A  PA  L   P         N+T +L   G F +F+  L +T 
Sbjct:     9 FIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYLLSTG 68

Query:    59 QDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQF 118
               +    Q NN+ +G+T+F P D+AF   K+  +++L+  Q  QLV FH LP   S S+F
Sbjct:    69 VIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEF 128

Query:   119 Q--TASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQ 176
             +  + S P+ T AG    G++ L  T     V + +      V+++VFS   +AVYQV++
Sbjct:   129 KNLSQSGPVSTFAG----GQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNR 184

Query:   177 VLLPLDLFGSQ-----APAPAP--STPEKDVPVAATPKGSSTDAS 214
             VLLP  +FG+      APAPAP  S P  D P  A  +G+S+  S
Sbjct:   185 VLLPEAIFGTDVPPMPAPAPAPIVSAPS-DSPSVADSEGASSPKS 228

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2050822 FLA8 "FASCICLIN-like arabinogalactan protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 75/197 (38%), Positives = 110/197 (55%)

Query:    23 SAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDN 82
             +A  P+A+LS   NIT +LEK G  T F  LL ++     + T  +   +GLTVFAP+D 
Sbjct:   179 TAPAPSASLS---NITGLLEKAGCKT-FANLLVSS---GVLKTYESAVEKGLTVFAPSDE 231

Query:    83 AFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVT 142
             AF       +  L+  + V L+++H L         +T  N + T A N   G+F L  +
Sbjct:   232 AFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGA-GKFDLTTS 290

Query:   143 TSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFG-SQAPAPAPSTPEKDVP 201
             TSG++V L TGV  + +A+TV   + + ++ VD VLLP +LFG S++P+PAP+ PE   P
Sbjct:   291 TSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPA-PE---P 346

Query:   202 VAATPKGSSTDASVDTS 218
             V A P  S  DA   T+
Sbjct:   347 VTA-PTPSPADAPSPTA 362

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2101841 FLA10 "FASCICLIN-like arabinogalactan-protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 2.1e-21, P = 2.1e-21
 Identities = 75/203 (36%), Positives = 109/203 (53%)

Query:    27 PAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFAN 86
             PA + +G  NIT +LEK G  T F  LL ++     I T  +   +GLTVFAP+D AF  
Sbjct:   181 PAPSSAGVSNITGLLEKAGCKT-FANLLVSS---GVIKTFESTVEKGLTVFAPSDEAFKA 236

Query:    87 LKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGN 146
                  + +L+  + V L+++H L         +T  + + T A N   G++ L  +TSG+
Sbjct:   237 RGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGA-GKYDLTTSTSGD 295

Query:   147 QVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFG-SQAPAPAPS-------TPEK 198
             +V L TGV  + +A+TV   + + ++ VD VLLP +LFG S +PAPAP        TP K
Sbjct:   296 EVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKSSSPAPAPEPVSAPTPTPAK 355

Query:   199 DV-PVAA-TPKGSSTDAS-VDTS 218
                PV A +P  +S  A  VD S
Sbjct:   356 SPSPVEAPSPTAASPPAPPVDES 378

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2135818 FLA2 "FASCICLIN-like arabinogalactan 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 66/208 (31%), Positives = 99/208 (47%)

Query:    14 VSLLHCIKTSAQVPAAALSGPPN---ITAILEKGGQFTSFIRLLENTQQDDQINTQLNNS 70
             +S+LH  +      A A +  P+   +T ILEK G   +F  +L++T  D      ++  
Sbjct:   165 ISVLHISQVLTSPEAEAPTASPSDLILTTILEKQG-CKAFSDILKSTGADKTFQDTVDG- 222

Query:    71 NQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAG 130
               GLTVF P+D+A          SLS   K  LV +H +P   S    ++ +  + T A 
Sbjct:   223 --GLTVFCPSDSAVGKFMP-KFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLAT 279

Query:   131 NSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGS-QAP 189
               N+ +F   V   G  V L T V  A V  T+     L VY++D+VLLP +++ + +  
Sbjct:   280 EGNN-KFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVKTS 338

Query:   190 APAP-STPEKDVPVAATPKGSSTDASVD 216
             APAP S+ +K     A   G S DA  D
Sbjct:   339 APAPKSSKKKPKNAEADADGPSADAPSD 366

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2075185 SOS5 "salt overly sensitive 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 2.8e-17, P = 2.8e-17
 Identities = 61/196 (31%), Positives = 106/196 (54%)

Query:    28 AAALSGPP---NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQG--LTVFAPTDN 82
             + +LS PP   N+T IL  G  F   + LL  +     + T+  N  +G  +TVF PTD+
Sbjct:   196 STSLSPPPAGINLTQILINGHNFNVALSLLVASG----VITEFENDERGAGITVFVPTDS 251

Query:    83 AFANLKSGT-INSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLR-TQAGNS-NDGEFPL 139
             AF++L S   + SL  +QK  +++FH+L +  +    ++ +NP++ T A      G + L
Sbjct:   252 AFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTL 311

Query:   140 NVT-TSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLFGSQAPAPAPSTPEK 198
             N++  +G+ V + +GV  A V  T F  + ++V+ V +VLLP +LF       A + P++
Sbjct:   312 NISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPKSGQPVATAPPQE 371

Query:   199 DVPVAATPKGSSTDAS 214
                ++ +P+ SS   S
Sbjct:   372 ---ISLSPESSSEQPS 384

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0030247 "polysaccharide binding" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LEJ6	FLA11_ARATH	No assigned EC number	0.6820	0.7909	0.7845	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00160813 SubName- Full=Putative uncharacterized protein; (240 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	244
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	1e-25
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	1e-18
COG2335	187	COG2335, COG2335, Secreted and surface protein con	5e-09

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 96.6 bits (241), Expect = 1e-25
 Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 17/138 (12%)

Query: 45  GQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL--SDQQKVQ 102
             F++F+ LL+       +   LN S    TVFAPTD AFA L +GT+N L    +Q   
Sbjct: 1   PGFSTFVALLKAAG----LVDTLNGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKN 56

Query: 103 LVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANT 162
           L+++H++P  +++S  +     L T  G+       L V  +G  V     VN A V  +
Sbjct: 57  LLKYHVVPGRLTSSDLKNGGT-LATLQGS------KLRVNVTGGTVT----VNGARVVQS 105

Query: 163 VFSGSNLAVYQVDQVLLP 180
               +N  ++ +D+VLLP
Sbjct: 106 DIEATNGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 77.8 bits (192), Expect = 1e-18
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 75  TVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSND 134
           TVFAPTD AF  L    +NSL   +   L+ +H++P  +S++        L T AG+   
Sbjct: 1   TVFAPTDEAFQKLPPD-LNSLLADKLKNLLLYHVVPGRLSSADLLN-GGTLPTLAGS--- 55

Query: 135 GEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL 181
               L +T SG    +T  VN A +     + +N  V+ +D+VLLP 
Sbjct: 56  ---KLRITRSGGSGTVT--VNGARIVEADIAATNGVVHVIDRVLLPP 97

Length = 97

>gnl|CDD|225214 COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

 Score = 53.9 bits (130), Expect = 5e-09
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 20/163 (12%)

Query: 22  TSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTD 81
           T     AA      +I         FT+ +  L+             N     TVFAPT+
Sbjct: 35  TLETGRAAVKGNRADIVESAANNPSFTTLVAALKAAGL-----VDTLNETGPFTVFAPTN 89

Query: 82  NAFANLKSGTINSL----SDQQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEF 137
            AFA L +GT+++L    +     +++ +H++   ++ +  +++ +        +     
Sbjct: 90  EAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKITAADLKSSGS--VKTVQGA----- 142

Query: 138 PLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
            L +  +G  V     VN+ATV     + SN  ++ +D+VL+P
Sbjct: 143 DLKIKVTGGGVY----VNDATVTIADINASNGVIHVIDKVLIP 181

Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	244
COG2335	187	Secreted and surface protein containing fasciclin-	99.94
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.9
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.84
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.29
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.16

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=6e-27  Score=197.00  Aligned_cols=136  Identities=25%  Similarity=0.447  Sum_probs=119.0

Q ss_pred             CccCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCCC----HHHHHhhcccce
Q 026047           33 GPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLS----DQQKVQLVQFHI  108 (244)
Q Consensus        33 ~~~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L~----~~~l~~lL~yHI  108 (244)
                      ...+|.+...++++|++|..+++.++|.++|++     .++||||||||+||.+++.++++.|.    .+.+.++|.|||
T Consensus        46 ~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~-----~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHV  120 (187)
T COG2335          46 NRADIVESAANNPSFTTLVAALKAAGLVDTLNE-----TGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHV  120 (187)
T ss_pred             chhHHHHHHccCcchHHHHHHHHhhhhHHHhcC-----CCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEE
Confidence            456788888889999999999999999999997     89999999999999999999998882    357899999999


Q ss_pred             eccccChhccccCCCceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECccccCCCCC
Q 026047          109 LPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLDLF  184 (244)
Q Consensus       109 v~~~~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP~~l~  184 (244)
                      ++|+++.+++... +.++|+.|.      .++|...++.++|+    +++|+..|+.++||+||+||+||+|+...
T Consensus       121 v~Gk~~~~~l~~~-~~v~t~~G~------~~~i~~~~~~~~Vn----~a~v~~~di~a~NgvIhvID~Vl~Pp~~~  185 (187)
T COG2335         121 VEGKITAADLKSS-GSVKTVQGA------DLKIKVTGGGVYVN----DATVTIADINASNGVIHVIDKVLIPPMDL  185 (187)
T ss_pred             EcCcccHHHhhcc-ccceeecCc------eEEEEEcCCcEEEe----eeEEEeccEeccCcEEEEEeeeccCCCcc
Confidence            9999999999973 578898862      45666655669997    79999999999999999999999998753

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.90  E-value=4e-24  Score=168.91  Aligned_cols=125  Identities=32%  Similarity=0.523  Sum_probs=96.6

Q ss_pred             CChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCC--CHHHHHhhcccceeccccChhccccCC
Q 026047           45 GQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL--SDQQKVQLVQFHILPTSMSTSQFQTAS  122 (244)
Q Consensus        45 ~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L--~~~~l~~lL~yHIv~~~~~~s~L~~~s  122 (244)
                      |+||+|.++|+++|+.+.|++    +.+.||||||+|+||++++.+..+.+  ..+++.++|+|||+++.++.+++....
T Consensus         1 ~~~s~f~~~l~~~~l~~~l~~----~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~   76 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLADLLND----SDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGK   76 (128)
T ss_dssp             -TTHHHHHHHHHTTCHHHHGC----SSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCHH
T ss_pred             CCHHHHHHHHHHcCCHHHHhc----CCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcccc
Confidence            689999999999999999942    26899999999999999865554444  467899999999999999999998752


Q ss_pred             Cceec-cCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECccccC
Q 026047          123 NPLRT-QAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP  180 (244)
Q Consensus       123 ~~l~T-lag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP  180 (244)
                      ..++| +.|    +.+.++...+++.++|++   .++|++.++.+.||+||+||+||+|
T Consensus        77 ~~~~t~~~g----~~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   77 QTLETLLNG----QPLRVSSSPSNGTIYVNG---KARIVKSDIEASNGVIHIIDDVLIP  128 (128)
T ss_dssp             EEEEBSSTT----CEEEEEEEGGTTEEEECC---EEEESEEEEEESSEEEEEESS-TSS
T ss_pred             ccceeccCC----CEEEEEEEecCCceEecC---ceEEEeCCEEeCCEEEEEECceECc
Confidence            36888 444    334444442378899973   4999999999999999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.84  E-value=2.9e-21  Score=146.74  Aligned_cols=96  Identities=39%  Similarity=0.595  Sum_probs=80.5

Q ss_pred             EEEecCcHHHHhCccccccCCCHH-HHHhhcccceeccccChhccccCCCceeccCCCCCCCeeeEEEEecC--cEEEEe
Q 026047           75 TVFAPTDNAFANLKSGTINSLSDQ-QKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSG--NQVNLT  151 (244)
Q Consensus        75 TVFAPtD~AF~~l~~~~l~~L~~~-~l~~lL~yHIv~~~~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g--~~v~v~  151 (244)
                      |||||+|+||+++..+.++.+..+ .++++|+|||++++++.++|... ..++|+.|    .  .+.++..+  +.++++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~~-~~~~Tl~g----~--~l~v~~~~~~~~i~in   73 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLNG-GTLPTLAG----S--KLRVTRSGDSGTVTVN   73 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhccC-CccccCCC----C--EEEEEEeCCCCeEEEc
Confidence            899999999999987655666433 88999999999999999999873 57889875    3  46666654  788886


Q ss_pred             cCccceEEeeeeccCCCeEEEEECccccCC
Q 026047          152 TGVNEATVANTVFSGSNLAVYQVDQVLLPL  181 (244)
Q Consensus       152 ~g~~~a~V~~~di~~~NGvIH~ID~VLlP~  181 (244)
                          +++|++.|+.++||+||+||+||+|+
T Consensus        74 ----~~~v~~~di~~~nGvih~Id~vL~P~   99 (99)
T smart00554       74 ----GARIVEADIAATNGVVHVIDRVLLPP   99 (99)
T ss_pred             ----ceEEEECCEecCCeEEEEECceeCCC
Confidence                58999999999999999999999985

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.29  E-value=1.8e-12  Score=127.88  Aligned_cols=135  Identities=21%  Similarity=0.291  Sum_probs=102.4

Q ss_pred             CCccCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCCCHHHHHhhcccceecc
Q 026047           32 SGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPT  111 (244)
Q Consensus        32 ~~~~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yHIv~~  111 (244)
                      ....+++++..++. -+++.+++.+-++.+.|..     ++.+|+|+|+|++|+.+.+.    +.+...+++|+||||+.
T Consensus       371 ~~~~~l~~La~e~~-~st~~rlv~elgll~~L~~-----n~e~t~~lp~n~~fd~~~~~----~~r~l~~qIL~~HII~~  440 (682)
T KOG1437|consen  371 DSLKNLMSLAREDE-ISTSMRLVAELGLLTALAP-----NDEATLLLPTNNLFDDLTPL----ESRRLAEQILYNHIIPE  440 (682)
T ss_pred             chHHHHHHHHhccc-ccHHHHHHHhccceEEEcC-----CCceEEeeehhhhccCCChh----hhHHHHHHHHHHhCcch
Confidence            34678899888875 4999999999999887765     45599999999999996552    12333789999999999


Q ss_pred             ccChhccccCCCceeccCCCCCCCeeeEEEEecC---cEEEEecCccceEEeeeeccCCCeEEEEECccccCC
Q 026047          112 SMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSG---NQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL  181 (244)
Q Consensus       112 ~~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g---~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP~  181 (244)
                      +.+.+++..+.+.++|+.+    .++..-+.+..   +...+.-|.. +.|...|+..+||+||.||+|+.|.
T Consensus       441 ~~~~~~~y~~~~~v~t~g~----~~l~~fv~r~~~s~~~t~i~~~~~-~~Ii~aDi~~~nGvvH~id~vl~p~  508 (682)
T KOG1437|consen  441 YLTSSSMYNGQTTVRTLGK----NKLLYFVYRHSVSANVTDILIGNE-ACIIEADISVKNGVVHIIDRVLDPV  508 (682)
T ss_pred             hhhhhhhhcccceeeccCC----eEEEEEEecccccccceeeeccce-eeEEecccceecCceEEeeEEcCcc
Confidence            9999999887667888765    23333333322   2222222333 8899999999999999999999993

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.16  E-value=9.9e-11  Score=115.69  Aligned_cols=131  Identities=20%  Similarity=0.335  Sum_probs=95.2

Q ss_pred             cCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCCC-HHHHHhhcccceecccc
Q 026047           35 PNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLS-DQQKVQLVQFHILPTSM  113 (244)
Q Consensus        35 ~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L~-~~~l~~lL~yHIv~~~~  113 (244)
                      .++++.|++++++|.|.++++..++.++++.     .+.||+|||||+||++...+... +. ...+..+++||++++.+
T Consensus       508 ~~l~~~l~~d~r~s~~~~~le~~~l~e~l~~-----~~~~t~fvPt~ka~~~~~~~~~~-~~~~~~l~~~l~yH~v~~~~  581 (682)
T KOG1437|consen  508 VSLMEDLKTDGRISGTVQGLEGVLLPEELTP-----EGNYTLFVPTNKAWQKSTKDEKS-LFHKKALQDFLKYHLVPGQS  581 (682)
T ss_pred             ccHHHHHhhccchhhhHHhhhhcCChhhhcc-----CCceEEEeecccccccCCcchhh-cchHHHHHHHHHhcccccee
Confidence            8999999999999999999999999999965     79999999999999997664322 43 46789999999999876


Q ss_pred             ChhccccCCCceeccCCCCCCCeeeEEEEecCcEEEEe----cCcc-ceEEeeeeccCCCeEEEEECccccCCCC
Q 026047          114 STSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLT----TGVN-EATVANTVFSGSNLAVYQVDQVLLPLDL  183 (244)
Q Consensus       114 ~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~----~g~~-~a~V~~~di~~~NGvIH~ID~VLlP~~l  183 (244)
                      .   +...+.+..+  .    + +.++  ..++.+.+.    .|.. ..++...++...||++|+||.||.|+++
T Consensus       582 ~---ls~~~~~~v~--~----~-~k~s--~~~~~~~~~~~~~~~~vn~e~~~~~~i~~~n~~~h~i~~vl~p~~l  644 (682)
T KOG1437|consen  582 R---LSLGSSPYVM--I----Q-VKLS--LRGDHLFFSLVNPRGDVNKERLVGIDIMGTNGVVHVIDLVLKPPDL  644 (682)
T ss_pred             e---eeccccccee--e----e-eeEE--EecccEEeeeeccccceeeeeeeccceeeecceeEEEEEEcccCcc
Confidence            5   2222222211  1    1 1222  223333222    2322 3456678899999999999999999865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	244
1w7d_A	137	Nmr Ensemble Of Fasciclin-Like Protein From Rhodoba		3e-05

>pdb|1W7D|A Chain A, Nmr Structure Of Fasciclin-Like Protein From Rhodobacter Sphaeroides Length = 137

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 40  ILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL---S 96
           I+E      SF  LL   +    ++T   +     TVFAPTD AFA L  GT+  L    
Sbjct: 5   IVETATGAGSFTTLLTAAEAAGLVDTLKGDGP--FTVFAPTDAAFAALPEGTVEDLLKPE 62
Query: 97  DQQKV-QLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVN 155
           +++K+ +++ +H++P  + +S           + G        L VT  G        VN
Sbjct: 63  NKEKLTEILTYHVVPGEVMSSDLTEGMTAETVEGGA-------LTVTLEGGPK-----VN 110
Query: 156 EATVANTVFSGSNLAVYQVDQVLLP 180
             +++      SN  ++ +D VL+P
Sbjct: 111 GVSISQPDVDASNGVIHVIDGVLMP 135

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	244
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	1e-12
2vxp_A	132	Transforming growth factor-beta-induced protein IG	8e-12
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	9e-12
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	6e-11
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	2e-08

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 62.4 bits (152), Expect = 1e-12
 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 21/149 (14%)

Query: 36  NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL 95
           +I       G FT+ +   E     D +           TVFAPTD AFA L  GT+  L
Sbjct: 4   DIVETATGAGSFTTLLTAAEAAGLVDTLKGD-----GPFTVFAPTDAAFAALPEGTVEDL 58

Query: 96  -SDQQKVQLV---QFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLT 151
              + K +L     +H++P  + +S          T  G        L VT  G      
Sbjct: 59  LKPENKEKLTEILTYHVVPGEVMSSDLTEGMT-AETVEGG------ALTVTLEGGPK--- 108

Query: 152 TGVNEATVANTVFSGSNLAVYQVDQVLLP 180
             VN  +++      SN  ++ +D VL+P
Sbjct: 109 --VNGVSISQPDVDASNGVIHVIDGVLMP 135

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 60.0 bits (146), Expect = 8e-12
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 18/146 (12%)

Query: 35  PNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINS 94
             +  +L+   +F+  +  +++    + +N          TVFAPT+ AF  L     + 
Sbjct: 2   GTVMDVLKGDNRFSMLVAAIQSAGLTETLN-----REGVYTVFAPTNEAFRALPPRERSR 56

Query: 95  LSDQQK--VQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTT 152
           L    K    ++++HI    + +     A   L++  G+       L V+   N V+   
Sbjct: 57  LLGDAKELANILKYHIGDEILVSGGI-GALVRLKSLQGD------KLEVSLKNNVVS--- 106

Query: 153 GVNEATVANTVFSGSNLAVYQVDQVL 178
            VN+  VA      +N  V+ +  VL
Sbjct: 107 -VNKEPVAEPDIMATNGVVHVITNVL 131

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 60.5 bits (147), Expect = 9e-12
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 18/162 (11%)

Query: 22  TSAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDD-QINTQLNNSNQGLTVFAPT 80
                 +        +        + T+    L         +   LN+     TVFAPT
Sbjct: 15  NPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ--YTVFAPT 72

Query: 81  DNAFANLKSGTINSLSDQQK--VQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFP 138
           + AF+ L + TI+ L         ++ +H++    S +         +T  G        
Sbjct: 73  NAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANV---VGTRQTLQGA------S 123

Query: 139 LNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
           + VT  GN +     V  A V     S +N  VY +D VL+P
Sbjct: 124 VTVTGQGNSLK----VGNADVVCGGVSTANATVYMIDSVLMP 161

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 60.4 bits (146), Expect = 6e-11
 Identities = 20/156 (12%), Positives = 41/156 (26%), Gaps = 13/156 (8%)

Query: 34  PPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANL----KS 89
              +   LE     +   ++ + +      N QLNN+ +  T F P D  +        S
Sbjct: 158 YTTVLGKLESDPMMSDTYKMGKFSH----FNDQLNNTQRRFTYFVPRDKGWQKTELDYPS 213

Query: 90  GTINSLSDQQKVQLVQ---FHILP--TSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTS 144
                               H+       +       S    +    +      + V   
Sbjct: 214 AHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEE 273

Query: 145 GNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
             +  +     +  V       +N  ++ +D  LL 
Sbjct: 274 AGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLE 309

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 53.0 bits (127), Expect = 2e-08
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 10/162 (6%)

Query: 23  SAQVPAAALSGPPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDN 82
           +A           +     E  G    F  ++ +            NS   +T+ AP++ 
Sbjct: 1   AAAADTTVTQFLQSFKENAE-NGALRKFYEVIMDNGGAV---LDDINSLTEVTILAPSNE 56

Query: 83  AFANLKSGTINSLSDQQK-VQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEF-PLN 140
           A+    S   N L D+ K  Q++  HI+   ++  + +  +  L  Q    N+  F   N
Sbjct: 57  AWN--SSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFN 114

Query: 141 VTTSGNQVNLTT--GVNEATVANTVFSGSNLAVYQVDQVLLP 180
           V   G+   +T   G   ATV     + +N  V+ +D VL  
Sbjct: 115 VRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGV 156

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	244
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.96
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.96
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.96
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.92
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.91

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.96  E-value=3.1e-31  Score=213.35  Aligned_cols=132  Identities=27%  Similarity=0.468  Sum_probs=117.2

Q ss_pred             ccCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCC----CHHHHHhhccccee
Q 026047           34 PPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL----SDQQKVQLVQFHIL  109 (244)
Q Consensus        34 ~~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L----~~~~l~~lL~yHIv  109 (244)
                      ++||+++|+++++||+|.++|+++|+.+.|++     .++||||||+|+||++++.+.++.|    +++.++++|+|||+
T Consensus         2 ~~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~-----~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv   76 (137)
T 1w7d_A            2 TGDIVETATGAGSFTTLLTAAEAAGLVDTLKG-----DGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVV   76 (137)
T ss_dssp             CSTTGGGGGSCSSSTTTTHHHHHTTTHHHHTS-----SSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEE
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHHcCCHHHHcC-----CCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEe
Confidence            57899999999999999999999999999986     6899999999999999988777777    34678999999999


Q ss_pred             ccccChhccccCCCceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECccccCCC
Q 026047          110 PTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLD  182 (244)
Q Consensus       110 ~~~~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP~~  182 (244)
                      +++++.++|... ..++|+.|    +  .|+|+..+| ++|+    +++|+..|+.++||+||+||+||+|+.
T Consensus        77 ~~~~~~~~l~~~-~~~~tl~G----~--~l~v~~~~g-v~vn----~a~v~~~di~~~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           77 PGEVMSSDLTEG-MTAETVEG----G--ALTVTLEGG-PKVN----GVSISQPDVDASNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             ESCCCTTTSCSS-EEEECTTS----C--EEEEECTTS-CEET----TEECSBCCCBCSSSEEEBCSSCCSSCC
T ss_pred             CcEEcHHHhcCC-CeeeccCC----c--eEEEEecCC-EEEe----CcEEEECCeecCCeEEEEECeeeCCCC
Confidence            999999999874 46888876    2  578888777 8886    589999999999999999999999973

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.96  E-value=7.7e-30  Score=204.01  Aligned_cols=129  Identities=21%  Similarity=0.345  Sum_probs=113.9

Q ss_pred             cCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCC--CHHHHHhhcccceeccc
Q 026047           35 PNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL--SDQQKVQLVQFHILPTS  112 (244)
Q Consensus        35 ~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L--~~~~l~~lL~yHIv~~~  112 (244)
                      +||+++|+++++||+|.++++++|+.+.|++     .++||||||+|+||++++.+.++.|  ++++++++|+|||+++.
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~-----~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~   76 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNR-----EGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEI   76 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHS-----SCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSC
T ss_pred             ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcC-----CCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCce
Confidence            6899999999999999999999999999986     7899999999999999988776665  57889999999999999


Q ss_pred             cChhccccCCCceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECcccc
Q 026047          113 MSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLL  179 (244)
Q Consensus       113 ~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLl  179 (244)
                      ++.+++... ..++|+.|    +  .++|+..++.++|+    +++|+..|+.++||+||+||+||+
T Consensus        77 ~~~~~l~~~-~~~~tl~G----~--~l~v~~~~~~v~vn----~a~v~~~di~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           77 LVSGGIGAL-VRLKSLQG----D--KLEVSLKNNVVSVN----KEPVAEPDIMATNGVVHVITNVLQ  132 (132)
T ss_dssp             CCSTTCSSC-EEEEBTTS----S--EEEEEEETTEEEES----SCBEEEEEEEETTEEEEEESSCC-
T ss_pred             eehhhccCC-ceEecCCC----C--EEEEEEeCCEEEEe----ccEEEEcceecCCEEEEEECcEeC
Confidence            988888753 46889876    2  57788888889996    589999999999999999999985

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.96  E-value=1.6e-29  Score=209.47  Aligned_cols=131  Identities=27%  Similarity=0.433  Sum_probs=116.1

Q ss_pred             CccCHHHHHHhCCChHHHHHHHH-----HCCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCC--CHHHHHhhcc
Q 026047           33 GPPNITAILEKGGQFTSFIRLLE-----NTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL--SDQQKVQLVQ  105 (244)
Q Consensus        33 ~~~ni~~iL~~~~~fS~F~~lL~-----~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L--~~~~l~~lL~  105 (244)
                      ...+|+++|+++++||+|.++|+     ++|+.+.|++     .+ ||||||+|+||++++.++++.|  +++.++++|+
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~-----~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~   99 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-----GQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILT   99 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-----SS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHH
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCC-----CC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHH
Confidence            56899999999999999999999     9999999986     56 9999999999999988777766  3478999999


Q ss_pred             cceeccccChhccccCCCceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECccccCCC
Q 026047          106 FHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLD  182 (244)
Q Consensus       106 yHIv~~~~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP~~  182 (244)
                      |||+++.++.++|.   +.++|+.|    +  .|+|+..++.++|+    +++|+..|+.++||+||+||+||+|+.
T Consensus       100 yHvv~g~~~~~~l~---g~~~Tl~G----~--~l~v~~~~~~v~vn----~a~V~~~di~a~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          100 YHVVAGQTSPANVV---GTRQTLQG----A--SVTVTGQGNSLKVG----NADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             HTEEESCCCTTTSC---EEEECTTS----S--EEEEEECSSCEEET----TEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hceECCEEcHHHhC---CccccCCC----C--EEEEEEECCEEEEe----ccEEEECceEcCCEEEEEECcEeCCCC
Confidence            99999999999997   37889875    2  57888888889986    589999999999999999999999973

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.92  E-value=1.4e-25  Score=203.20  Aligned_cols=143  Identities=14%  Similarity=0.163  Sum_probs=118.3

Q ss_pred             ccCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCc----cccccCCCH---HHHHhhccc
Q 026047           34 PPNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLK----SGTINSLSD---QQKVQLVQF  106 (244)
Q Consensus        34 ~~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~----~~~l~~L~~---~~l~~lL~y  106 (244)
                      ..++.++|+++++|++|.++++.+|+.+.|++    +.++||||||+|+||++++    .+..+.|.+   ++++++|+|
T Consensus       158 ~~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~----~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~y  233 (324)
T 1o70_A          158 YTTVLGKLESDPMMSDTYKMGKFSHFNDQLNN----TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILER  233 (324)
T ss_dssp             CSCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC----SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHT
T ss_pred             hhhHHHHhhcCchHHHHHHHHHhhCHHHHhCC----CCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHh
Confidence            46899999999999999999999999888863    3689999999999999984    334455543   489999999


Q ss_pred             ceecc--ccChhccccCCC-----ceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECcccc
Q 026047          107 HILPT--SMSTSQFQTASN-----PLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLL  179 (244)
Q Consensus       107 HIv~~--~~~~s~L~~~s~-----~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLl  179 (244)
                      ||+++  .|+.++|...++     .++|+. +    ++.++++..|+.++|+.+.++++|+..|+.+.||+||+||+||+
T Consensus       234 Hvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~-~----~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NGvIHvID~VL~  308 (324)
T 1o70_A          234 HLAISDKEYTMKDLVKFSQESGSVILPTFR-D----SLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLL  308 (324)
T ss_dssp             TEEEESSCCCHHHHHHHHHHSSSEEEECSS-S----EEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSC
T ss_pred             cEeCCcceEcHHHHhhhccCCCeeeeeccC-C----cEEEEEEecCCEEEEEecCceeEEEEcccccCCCeEEEeceeec
Confidence            99998  888899986422     378876 2    46676666788999986666899999999999999999999999


Q ss_pred             CCCCCC
Q 026047          180 PLDLFG  185 (244)
Q Consensus       180 P~~l~~  185 (244)
                      |++...
T Consensus       309 P~~~~~  314 (324)
T 1o70_A          309 EEKDVV  314 (324)
T ss_dssp             CTTTTC
T ss_pred             CCcccc
Confidence            998755

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.91  E-value=9.9e-25  Score=197.59  Aligned_cols=139  Identities=21%  Similarity=0.313  Sum_probs=107.3

Q ss_pred             CccCHHHHHH------hCCChHHHHHHHHHCC--ChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCC--CHHHHHh
Q 026047           33 GPPNITAILE------KGGQFTSFIRLLENTQ--QDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL--SDQQKVQ  102 (244)
Q Consensus        33 ~~~ni~~iL~------~~~~fS~F~~lL~~t~--l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L--~~~~l~~  102 (244)
                      -..||+++|+      ++++||+|.++|+++|  +.+.|++     .++||||||+|+||+++.   ++.|  +++.+++
T Consensus         4 ~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~-----~~~~TvFAPtn~Af~~~~---~~~l~~~~~~l~~   75 (324)
T 1o70_A            4 ADTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINS-----LTEVTILAPSNEAWNSSN---INNVLRDRNKMRQ   75 (324)
T ss_dssp             ---------------CCHHHHHHHHHHHHHTCSHHHHHHHT-----CSSEEEEEECHHHHHHTC---THHHHTCHHHHHH
T ss_pred             ehhhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcC-----CCCeEEEEEChHhhhccc---HhhhhCCHHHHHH
Confidence            3578999998      6789999999999999  9999987     789999999999998763   3333  5788999


Q ss_pred             hcccceeccccChhccccCCC----ceeccCCCCCCCeeeEEEEec--CcEEEEecCccceEEeeeeccCCCeEEEEECc
Q 026047          103 LVQFHILPTSMSTSQFQTASN----PLRTQAGNSNDGEFPLNVTTS--GNQVNLTTGVNEATVANTVFSGSNLAVYQVDQ  176 (244)
Q Consensus       103 lL~yHIv~~~~~~s~L~~~s~----~l~Tlag~~~~g~~~l~Vt~~--g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~  176 (244)
                      +|+|||++++++.++|....+    .++|+.|.   ..+.++++..  ++.+++++|..+++|+..|+.++||+||+||+
T Consensus        76 iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~---~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NGvIhvID~  152 (324)
T 1o70_A           76 ILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNN---TFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDH  152 (324)
T ss_dssp             HHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTT---CEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESS
T ss_pred             HHHhcEeCCeecHHHHhhccCCCceEEEcCCCC---ceEEEEEeecCCceEEEEcCCceeEEEEeccccccCcEEEEEch
Confidence            999999999999999987532    68898873   2245676643  35688887766799999999999999999999


Q ss_pred             cccCCC
Q 026047          177 VLLPLD  182 (244)
Q Consensus       177 VLlP~~  182 (244)
                      ||.|+.
T Consensus       153 VL~pp~  158 (324)
T 1o70_A          153 VLGVPY  158 (324)
T ss_dssp             CTTSCC
T ss_pred             hhhhch
Confidence            999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	244
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	2e-15
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	1e-14
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	6e-06

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 69.0 bits (168), Expect = 2e-15
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 45  GQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLV 104
           G    F  ++ +      +   +N S   +T+ AP++ A+ +     +      +  Q++
Sbjct: 4   GALRKFYEVIMDNGGA--VLDDIN-SLTEVTILAPSNEAWNSSNINNVLR-DRNKMRQIL 59

Query: 105 QFHILPTSMSTSQFQTASNPLRTQAGNSNDGEF-PLNVTTSGNQVNLTT--GVNEATVAN 161
             HI+   ++  + +  +  L  Q    N+  F   NV   G+   +T   G   ATV  
Sbjct: 60  NMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQ 119

Query: 162 TVFSGSNLAVYQVDQVLLP 180
              + +N  V+ +D VL  
Sbjct: 120 ADVAQTNGYVHIIDHVLGV 138

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 67.2 bits (163), Expect = 1e-14
 Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 13/153 (8%)

Query: 37  ITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLS 96
           +   LE     +   ++ + +      N QLNN+ +  T F P D  +   +    ++  
Sbjct: 3   VLGKLESDPMMSDTYKMGKFSH----FNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHK 58

Query: 97  D-------QQKVQLVQFHILPTS--MSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQ 147
                        +++ H+  +    +       S    +    +      + V     +
Sbjct: 59  KLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGR 118

Query: 148 VNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP 180
             +     +  V       +N  ++ +D  LL 
Sbjct: 119 YVIIWNYKKINVYRPDVECTNGIIHVIDYPLLE 151

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.8 bits (100), Expect = 6e-06
 Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 16/147 (10%)

Query: 36  NITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSL 95
            +        + T+    L   Q + Q+N     ++   TVFAPT+ AF+ L + TI+ L
Sbjct: 29  PVAVAASNNPELTTLTAALS-GQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDEL 87

Query: 96  SD--QQKVQLVQFHILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTG 153
                    ++ +H++    S +        L+            + VT  GN +     
Sbjct: 88  KTNSSLLTSILTYHVVAGQTSPANVVGTRQTLQGA---------SVTVTGQGNSLK---- 134

Query: 154 VNEATVANTVFSGSNLAVYQVDQVLLP 180
           V  A V     S +N  VY +D VL+P
Sbjct: 135 VGNADVVCGGVSTANATVYMIDSVLMP 161

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	244
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.94
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.92
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.9

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=2.5e-28  Score=200.67  Aligned_cols=130  Identities=26%  Similarity=0.414  Sum_probs=113.2

Q ss_pred             ccCHHHHHHhCCChHHHHHHHHH-----CCChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCCC--HHHHHhhccc
Q 026047           34 PPNITAILEKGGQFTSFIRLLEN-----TQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLS--DQQKVQLVQF  106 (244)
Q Consensus        34 ~~ni~~iL~~~~~fS~F~~lL~~-----t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L~--~~~l~~lL~y  106 (244)
                      ..++.+.+.++++||+|.++++.     ++|.+.|+      .++||||||+|+||++++.+.++.|.  ++.++++|+|
T Consensus        27 ~~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~------~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~y  100 (163)
T d1nyoa_          27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN------SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTY  100 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT------SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHH
T ss_pred             cchHHHHHhcCCchHHHHHHHhhccccccchhHhhc------CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhh
Confidence            46899999999999999999984     79999986      38899999999999999887776663  4679999999


Q ss_pred             ceeccccChhccccCCCceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECccccCCC
Q 026047          107 HILPTSMSTSQFQTASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPLD  182 (244)
Q Consensus       107 HIv~~~~~~s~L~~~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP~~  182 (244)
                      ||+++++..+++..   .++|+.|    +  .+.|+.+++.++|+    +++|+..|+.++||+||+||+||+||.
T Consensus       101 HVv~g~~~~~~l~~---~~~Tl~G----~--~l~v~~~~~~i~v~----~a~Vv~~di~a~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         101 HVVAGQTSPANVVG---TRQTLQG----A--SVTVTGQGNSLKVG----NADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             TEEESCCCTTTSCE---EEECTTS----S--EEEEEECSSCEEET----TEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hhhhhhhhhhhhhh---hhhhccC----c--ceeEEecCCEEEEe----ceEEEECCeecCCcEEEEECccccCCC
Confidence            99999999998864   4788876    2  57788888889986    689999999999999999999999974

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.92  E-value=2.8e-25  Score=179.19  Aligned_cols=139  Identities=14%  Similarity=0.161  Sum_probs=106.0

Q ss_pred             cCHHHHHHhCCChHHHHHHHHHCCChHHHhhhccCCCCCeEEEecCcHHHHhCcccc----ccCC---CHHHHHhhcccc
Q 026047           35 PNITAILEKGGQFTSFIRLLENTQQDDQINTQLNNSNQGLTVFAPTDNAFANLKSGT----INSL---SDQQKVQLVQFH  107 (244)
Q Consensus        35 ~ni~~iL~~~~~fS~F~~lL~~t~l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~----l~~L---~~~~l~~lL~yH  107 (244)
                      .+|+++|+.+|+|+.|.++++.+|+.+.|++    +.++||||||+|+||+++....    .+.+   .++.++++|+||
T Consensus         1 ~Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~----~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~H   76 (157)
T d1o70a2           1 TTVLGKLESDPMMSDTYKMGKFSHFNDQLNN----TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERH   76 (157)
T ss_dssp             SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGC----SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTT
T ss_pred             CcHHHHHHhCccHHHHHHHHHhCCHHHHHhC----CCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeE
Confidence            3799999999999999999999999998875    4678999999999999985432    1222   246789999999


Q ss_pred             eeccccChhc--ccc-----CCCceeccCCCCCCCeeeEEEEecCcEEEEecCccceEEeeeeccCCCeEEEEECccccC
Q 026047          108 ILPTSMSTSQ--FQT-----ASNPLRTQAGNSNDGEFPLNVTTSGNQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLP  180 (244)
Q Consensus       108 Iv~~~~~~s~--L~~-----~s~~l~Tlag~~~~g~~~l~Vt~~g~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP  180 (244)
                      |+++.....+  +..     .....+|+.     +++.+++...++.+.+....++++|++.|+.++||+||+||+||+|
T Consensus        77 iv~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a~NGviHvID~VLlp  151 (157)
T d1o70a2          77 LAISDKEYTMKDLVKFSQESGSVILPTFR-----DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLE  151 (157)
T ss_dssp             EEEESSCCCHHHHHHHHHHSSSEEEECSS-----SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCC
T ss_pred             EecccccchhhhhhhhhccCCceeEEecC-----CcEEEEEEcCCcEEEEecCCccceEEECCEecCCeEEEEECceecC
Confidence            9998654332  221     111233332     3456777777777777655567999999999999999999999999


Q ss_pred             CC
Q 026047          181 LD  182 (244)
Q Consensus       181 ~~  182 (244)
                      +.
T Consensus       152 ~~  153 (157)
T d1o70a2         152 EK  153 (157)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.90  E-value=1.5e-24  Score=171.34  Aligned_cols=130  Identities=20%  Similarity=0.292  Sum_probs=100.0

Q ss_pred             hCCChHHHHHHHHHCC--ChHHHhhhccCCCCCeEEEecCcHHHHhCccccccCCCHHHHHhhcccceeccccChhcccc
Q 026047           43 KGGQFTSFIRLLENTQ--QDDQINTQLNNSNQGLTVFAPTDNAFANLKSGTINSLSDQQKVQLVQFHILPTSMSTSQFQT  120 (244)
Q Consensus        43 ~~~~fS~F~~lL~~t~--l~~~L~~~ln~s~~~~TVFAPtD~AF~~l~~~~l~~L~~~~l~~lL~yHIv~~~~~~s~L~~  120 (244)
                      ++++|++|.++|+.+|  +.+.|++     .++||||||+|+||+++....+. .+.++++++|+|||+++.++.++|..
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~-----~~~~TvFAPtn~Af~~~~~~~~~-~~~~~l~~~l~yHiv~~~~~~~~l~~   75 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINS-----LTEVTILAPSNEAWNSSNINNVL-RDRNKMRQILNMHIIKDRLNVDKIRQ   75 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHT-----CSSEEEEEECHHHHHHTCTHHHH-TCHHHHHHHHHHTEESSCCCHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEEECHHHHhcCChhhhc-CCHHHHHHHHHhhccCCeEEHHHHhc
Confidence            4567999999999987  5566765     68899999999999987654321 25678999999999999999999976


Q ss_pred             CC----CceeccCCCCCCCeeeEEEEecC--cEEEEecCccceEEeeeeccCCCeEEEEECccccCC
Q 026047          121 AS----NPLRTQAGNSNDGEFPLNVTTSG--NQVNLTTGVNEATVANTVFSGSNLAVYQVDQVLLPL  181 (244)
Q Consensus       121 ~s----~~l~Tlag~~~~g~~~l~Vt~~g--~~v~v~~g~~~a~V~~~di~~~NGvIH~ID~VLlP~  181 (244)
                      ..    ..++|+.++   ..+..+++.++  ..+.+.++..+++|+..|+.+.|||||+||+||.||
T Consensus        76 ~~~~~~~~~~t~~g~---~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          76 KNANLIAQVPTVNNN---TFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVP  139 (140)
T ss_dssp             HTSSSCCCEEBSSTT---CEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSC
T ss_pred             CcccCceEeeecCCC---ceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCeEEEEECCccCCc
Confidence            42    236677653   22344555433  345555566789999999999999999999999987