Citrus Sinensis ID: 026056


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240----
MDLIFSHSPSSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSVTR
ccccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccEEccEEccccccccccEEccccEEEEEccccccccEEccccccccccccccccccccccccccccccccccccccEEEEEEccccccEEEcccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccEEEccccEEEEEcccccc
ccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccEEcccccccccccccEEcccccEEEEEcccccccEEEEEcccccccccccEEEEcccccccEEEEcccccccccEEEEEEEcccccEEEEEEccccEcccEEEEEccccccccccEEcccccccccHHHEcccccccccHHHHHccccccccccccccccccccHHHHHHHHHccccEccccccccccEEEEcccEEEEEcccccc
mdlifshspsSYITLILLLFCKGLSGATFTMVNRcsyavwpgilgnakldstgfeltpgssrsvqvpptwsgrfwgrtgctfdpttgqgscttgdcgsnqiecngltakppatlaefttgsgtqdfydvslvdgynlpmivepiggsgtclstgcvtdlnqrcpaelrdqsgegcksaceafgnpeyccsgayatpstckpsvysemfksacprsysyayddatstftctgadytitfcpsvtr
mdlifshsPSSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELtpgssrsvqvpptWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSVTR
MDLIFSHSPSSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSVTR
*********SSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELT******VQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELR***GEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCP****
***********YITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPS***
MDLIFSHSPSSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFEL**********PPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAE*********KSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSVTR
*DLIFSHSPSSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSV**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDLIFSHSPSSYITLILLLFCKGLSGATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCPSVTR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query244 2.2.26 [Sep-21-2011]
P50699243 Thaumatin-like protein OS no no 0.872 0.876 0.544 2e-64
P83332246 Thaumatin-like protein 1 N/A no 0.930 0.922 0.544 4e-63
P28493239 Pathogenesis-related prot no no 0.930 0.949 0.552 1e-62
O80327244 Thaumatin-like protein 1 N/A no 0.930 0.930 0.540 2e-62
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.926 0.918 0.535 9e-62
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.926 0.922 0.506 3e-58
P83336212 Thaumatin-like protein 1b N/A no 0.823 0.948 0.554 9e-57
P83335242 Thaumatin-like protein 2 N/A no 0.889 0.896 0.504 3e-56
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.930 0.934 0.487 4e-56
Q53MB8253 Thaumatin-like protein OS no no 0.860 0.830 0.493 9e-52
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function desciption
 Score =  245 bits (626), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/224 (54%), Positives = 152/224 (67%), Gaps = 11/224 (4%)

Query: 25  SGATFTMVNRCSYAVWPGI---LGNAKLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCT 81
           S +T    N+C + VWPGI    G   L   GF+L    + S+Q+PP WSGRFWGR GCT
Sbjct: 19  SASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCT 78

Query: 82  FDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFTTGSGTQDFYDVSLVDGYNLPMIV 141
           FD  +G+G C TGDCG + + CNG   +PPATLAE T G    DFYDVSLVDGYNL M +
Sbjct: 79  FD-RSGRGHCATGDCGGS-LSCNGAGGEPPATLAEITLGP-ELDFYDVSLVDGYNLAMSI 135

Query: 142 EPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEG-----CKSACEAFGNPEYCCSGAYATP 196
            P+ GSG C   GCV+DLNQ CP  L+ +S  G     CKSAC AF +P+YCC+G +  P
Sbjct: 136 MPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNP 195

Query: 197 STCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTITFCP 240
            +CKP+ YS++FK ACP++YSYAYDD TS  TC+ A+Y +TFCP
Sbjct: 196 QSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCP 239





Arabidopsis thaliana (taxid: 3702)
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
255538968325 Zeamatin precursor, putative [Ricinus co 0.987 0.741 0.792 1e-106
224083065236 predicted protein [Populus trichocarpa] 0.905 0.936 0.808 1e-102
224065813227 predicted protein [Populus trichocarpa] 0.909 0.977 0.813 1e-102
255577560316 Zeamatin precursor, putative [Ricinus co 0.942 0.727 0.753 4e-99
449469881226 PREDICTED: thaumatin-like protein 1a-lik 0.913 0.986 0.751 2e-97
5051760255 thaumatin-like protein [Arabidopsis thal 1.0 0.956 0.701 3e-95
356544806 346 PREDICTED: thaumatin-like protein-like [ 0.934 0.658 0.737 3e-94
79484988260 thaumatin-like protein 1 [Arabidopsis th 1.0 0.938 0.686 4e-94
118481123344 unknown [Populus trichocarpa] gi|4293266 0.963 0.683 0.715 5e-94
2262099262 thaumatin isolog [Arabidopsis thaliana] 1.0 0.931 0.680 6e-94
>gi|255538968|ref|XP_002510549.1| Zeamatin precursor, putative [Ricinus communis] gi|223551250|gb|EEF52736.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/246 (79%), Positives = 209/246 (84%), Gaps = 5/246 (2%)

Query: 1   MDLIFSHSPSSYITLI-LLLFCKGLSGATFTMVNRCSYAVWPGILGNA---KLDSTGFEL 56
           MD  FS S + YITLI L+ FC+G+SGATFT++NRC Y VWPGIL NA    L+STGFEL
Sbjct: 1   MDSFFSTS-ALYITLITLIAFCRGVSGATFTLINRCGYTVWPGILANAGSPALESTGFEL 59

Query: 57  TPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLAE 116
             G S+S Q PP WSGRFWGRTGCTFDP TGQG+C TGDCGSN I CNG  AKPPATLAE
Sbjct: 60  PSGGSQSFQSPPNWSGRFWGRTGCTFDPVTGQGTCLTGDCGSNLIACNGQNAKPPATLAE 119

Query: 117 FTTGSGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSGEGCK 176
           FT  SGTQDFYDVSLVDGYNLPMIVEP GGSGTCLSTGCVTDLNQ+CP ELR  SGE CK
Sbjct: 120 FTIRSGTQDFYDVSLVDGYNLPMIVEPNGGSGTCLSTGCVTDLNQQCPNELRVGSGEACK 179

Query: 177 SACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGADYTI 236
           SACEAFG PEYCCSGAYATP TCKPS+YS+MFK+ACPRSYSYAYDD TSTFTCTGADY I
Sbjct: 180 SACEAFGTPEYCCSGAYATPDTCKPSIYSQMFKAACPRSYSYAYDDPTSTFTCTGADYVI 239

Query: 237 TFCPSV 242
           TFCPS+
Sbjct: 240 TFCPSL 245




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083065|ref|XP_002306940.1| predicted protein [Populus trichocarpa] gi|222856389|gb|EEE93936.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224065813|ref|XP_002301966.1| predicted protein [Populus trichocarpa] gi|222843692|gb|EEE81239.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255577560|ref|XP_002529658.1| Zeamatin precursor, putative [Ricinus communis] gi|223530884|gb|EEF32745.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449469881|ref|XP_004152647.1| PREDICTED: thaumatin-like protein 1a-like, partial [Cucumis sativus] gi|449528383|ref|XP_004171184.1| PREDICTED: thaumatin-like protein 1a-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|5051760|emb|CAB45053.1| thaumatin-like protein [Arabidopsis thaliana] gi|7269268|emb|CAB79328.1| thaumatin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356544806|ref|XP_003540838.1| PREDICTED: thaumatin-like protein-like [Glycine max] Back     alignment and taxonomy information
>gi|79484988|ref|NP_194149.2| thaumatin-like protein 1 [Arabidopsis thaliana] gi|332659460|gb|AEE84860.1| thaumatin-like protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|118481123|gb|ABK92515.1| unknown [Populus trichocarpa] gi|429326650|gb|AFZ78665.1| thaumatin [Populus tomentosa] Back     alignment and taxonomy information
>gi|2262099|gb|AAB63607.1| thaumatin isolog [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query244
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.991 0.930 0.691 3.3e-95
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.963 0.681 0.698 1.3e-91
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.959 0.777 0.604 2.9e-80
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.942 0.727 0.598 3.5e-75
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.959 0.924 0.574 3.5e-75
TAIR|locus:2005549330 AT1G75800 "AT1G75800" [Arabido 0.950 0.703 0.599 4.5e-75
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.959 0.947 0.560 6.1e-71
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.938 0.930 0.563 1.3e-70
TAIR|locus:2121204281 AT4G38670 [Arabidopsis thalian 0.922 0.800 0.559 5.5e-70
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.938 0.930 0.580 1.1e-69
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
 Identities = 177/256 (69%), Positives = 200/256 (78%)

Query:     3 LIFSHSPSSYITLILLLF----CKGLSGATFTMVNRCSYAVWPGILGNA---KLDSTGFE 55
             ++ SH    +I L  L F      G  GAT T+VNRCS+ VWPGIL N+    + +TGFE
Sbjct:     5 VLHSHVSFYFIILSFLFFHALHLVGSDGATITIVNRCSFTVWPGILSNSGSGDIGTTGFE 64

Query:    56 LTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECNGLTAKPPATLA 115
             L PG SRS Q P +WSGRFW RTGC F+  TGQG+C TGDCGSNQ+ECNG  AKPPATLA
Sbjct:    65 LVPGGSRSFQAPASWSGRFWARTGCNFNSDTGQGTCLTGDCGSNQVECNGAGAKPPATLA 124

Query:   116 EFTTGSGT------QDFYDVSLVDGYNLPMIVEPIGGS-GTCLSTGCVTDLNQRCPAELR 168
             EFT GSG       QDFYDVSLVDGYN+PM+VE  GGS GTCL+TGCVTDLNQ+CP ELR
Sbjct:   125 EFTIGSGPADPARKQDFYDVSLVDGYNVPMLVEASGGSEGTCLTTGCVTDLNQKCPTELR 184

Query:   169 DQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFT 228
               SG  CKSACEAFG+PEYCCSGAYA+P+ CKPS+YSE+FKSACPRSYSYA+DDATSTFT
Sbjct:   185 FGSGSACKSACEAFGSPEYCCSGAYASPTECKPSMYSEIFKSACPRSYSYAFDDATSTFT 244

Query:   229 CTGADYTITFCPSVTR 244
             CT ADYTITFCPS+ R
Sbjct:   245 CTDADYTITFCPSLPR 260




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
GO:0009617 "response to bacterium" evidence=IDA
GO:0009682 "induced systemic resistance" evidence=IMP
GO:0009723 "response to ethylene stimulus" evidence=IDA
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121204 AT4G38670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80327TLP1_PYRPYNo assigned EC number0.54000.93030.9303N/Ano
P83332TLP1_PRUPENo assigned EC number0.54430.93030.9227N/Ano
P83335TLP2_PRUPENo assigned EC number0.50440.88930.8966N/Ano
P83336TP1B_MALDONo assigned EC number0.55450.82370.9481N/Ano
Q9FSG7TP1A_MALDONo assigned EC number0.53580.92620.9186N/Ano
P50694TLP_PRUAV3, ., 2, ., 1, ., 3, 90.50630.92620.9224N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pm.C_LG_V000656
hypothetical protein (236 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-113
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-106
smart00205218 smart00205, THN, Thaumatin family 1e-88
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 2e-45
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 8e-45
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 3e-38
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 6e-34
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  322 bits (827), Expect = e-113
 Identities = 142/221 (64%), Positives = 165/221 (74%), Gaps = 11/221 (4%)

Query: 28  TFTMVNRCSYAVWPGILGNAK---LDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDP 84
           TFT+ N+C + VWPGILGNA    L   GFEL PG SR++  P  WSGRFWGRTGC+FD 
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFD- 59

Query: 85  TTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFT-TGSGTQDFYDVSLVDGYNLPMIVEP 143
           ++G+GSC TGDCG   +ECNG    PPATLAEFT  GSG QDFYDVSLVDGYNLP+ + P
Sbjct: 60  SSGKGSCATGDCGGG-LECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITP 118

Query: 144 IGGSGTCLSTGCVTDLNQRCPAELRDQSGEG----CKSACEAFGNPEYCCSGAYATPSTC 199
            GGSG C + GCV DLN  CPAEL+ ++  G    CKSAC AF   EYCC GAY TP TC
Sbjct: 119 QGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETC 178

Query: 200 KPSVYSEMFKSACPRSYSYAYDDATSTFTC-TGADYTITFC 239
           KP+ YS +FK+ACP++YSYAYDD TSTFTC +GA+Y ITFC
Sbjct: 179 KPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 244
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 97.58
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.1
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 91.3
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=6.1e-83  Score=559.94  Aligned_cols=210  Identities=67%  Similarity=1.334  Sum_probs=198.4

Q ss_pred             EEEEEcCCCCccccceecCC---cCCCCCeeeCCCCeeEEEcCCCCceeeeecccCCCCCCCCCCCccCCCCCCcccccC
Q 026056           28 TFTMVNRCSYAVWPGILGNA---KLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECN  104 (244)
Q Consensus        28 t~ti~N~C~~tVwp~~~~~~---~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~~~~~g~~~C~TGdCg~g~~~C~  104 (244)
                      +|||+|||+||||||+++++   ++..+||+|+||++++|++|++|+|||||||+|++|+ .|+++|+||||+ |+|+|+
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~-~g~~~C~TGDCg-g~l~C~   78 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS-SGKGSCATGDCG-GGLECN   78 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCC-CCccccccCCCC-CeeecC
Confidence            59999999999999999876   4567999999999999999999999999999999997 899999999999 889999


Q ss_pred             CCCCCCCcceEEEEec-CCCcceeeeccccCcCCCceEeecCCCCCCCCccccCCCCCCCCccccCCCC----CCccchh
Q 026056          105 GLTAKPPATLAEFTTG-SGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQSG----EGCKSAC  179 (244)
Q Consensus       105 g~g~~ppaTlaEftl~-~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~~----~~C~SaC  179 (244)
                      +.+++||+|||||||. .+++|||||||||||||||+|+|+++...|+.++|.+|||+.||.||||++.    +||||||
T Consensus        79 g~~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC  158 (219)
T cd09218          79 GAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSAC  158 (219)
T ss_pred             CCCCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHH
Confidence            9888999999999994 4678999999999999999999987667899999999999999999999743    6999999


Q ss_pred             hhcCCCcccccCCCCCCCCCCCccchHHhhhcCCCcccccCCCCCCceeecC-CceEEEec
Q 026056          180 EAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTG-ADYTITFC  239 (244)
Q Consensus       180 ~a~~~~~yCC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~-~~y~VtFC  239 (244)
                      .+|++|||||+|+|++|++|+|+.||++||++||+||+|||||++|+|+|++ ++|+||||
T Consensus       159 ~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         159 LAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             HhhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            9999999999999999999999999999999999999999999999999984 89999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 2e-60
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 5e-58
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 1e-41
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 1e-38
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 3e-37
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 4e-37
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 8e-37
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 1e-36
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 1e-36
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 1e-36
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 3e-36
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 6e-35
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 7e-35
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 2e-34
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 3e-34
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 6e-17
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 228 bits (582), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 122/223 (54%), Positives = 149/223 (66%), Gaps = 10/223 (4%) Query: 27 ATFTMVNRCSYAVWPGIL-GNAK--LDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFD 83 A T N C VWPG L G+ K L TGFEL +SRSV P WSGRFWGRT C+ D Sbjct: 1 AKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTD 60 Query: 84 PTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFT-TGSGTQDFYDVSLVDGYNLPMIVE 142 G+ +C T DCGS Q+ CNG A PPATL E T +G QD+YDVSLVDG+NLPM V Sbjct: 61 -AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVA 119 Query: 143 PIGGSGTCLSTGCVTDLNQRCPAELRDQSGEG----CKSACEAFGNPEYCCSGAYATPST 198 P GG+G C + C ++N+ CPA L+ ++ +G CKSAC AFG+ +YCC+ TP T Sbjct: 120 PQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPET 179 Query: 199 CKPSVYSEMFKSACPRSYSYAYDDATSTFTCTGA-DYTITFCP 240 C P+ YSE+F+ CP++YSYAYDD STFTC+G DY ITFCP Sbjct: 180 CPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query244
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 2e-70
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 2e-64
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 2e-61
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 5e-54
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 2e-53
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 6e-41
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  214 bits (545), Expect = 2e-70
 Identities = 116/223 (52%), Positives = 143/223 (64%), Gaps = 10/223 (4%)

Query: 27  ATFTMVNRCSYAVWPGILGNAK---LDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFD 83
           AT +  N C Y VWPG L + +   L +TGFEL   +S  +  P  W+GRFW RTGC+ D
Sbjct: 1   ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD 60

Query: 84  PTTGQGSCTTGDCGSNQIECNGLTAKPPATLAEFT-TGSGTQDFYDVSLVDGYNLPMIVE 142
             +G+  C T DC S Q+ CNG  A PPATLAEF     G QDFYDVSLVDG+NLPM V 
Sbjct: 61  -ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVT 119

Query: 143 PIGGSGTCLSTGCVTDLNQRCPAELRDQSGEG----CKSACEAFGNPEYCCSGAYATPST 198
           P GG+G C +  C  ++N  CP+EL+ +  +G    C SAC  FG P+YCC+    TP T
Sbjct: 120 PQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPET 179

Query: 199 CKPSVYSEMFKSACPRSYSYAYDDATSTFTC-TGADYTITFCP 240
           C P+ YSE+F +ACP +YSYAYDD   TFTC  G +Y ITFCP
Sbjct: 180 CPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 92.9
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=4.7e-87  Score=585.99  Aligned_cols=213  Identities=54%  Similarity=1.106  Sum_probs=201.4

Q ss_pred             eEEEEEcCCCCccccceecCC---cCCCCCeeeCCCCeeEEEcCCCCceeeeecccCCCCCCCCCCCccCCCCCCccccc
Q 026056           27 ATFTMVNRCSYAVWPGILGNA---KLDSTGFELTPGSSRSVQVPPTWSGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIEC  103 (244)
Q Consensus        27 ~t~ti~N~C~~tVwp~~~~~~---~~~~~g~~L~~G~s~s~~vp~~WsGriWaRtgCs~~~~~g~~~C~TGdCg~g~~~C  103 (244)
                      ++|||+|+|+||||||+++++   ++..+||+|++|++++|++|++|+|||||||+|++|+ .|+++|+|||||+|+|+|
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~-~g~~~C~TGdCgsg~l~C   79 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDA-SGKFVCATADCASGQVMC   79 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECT-TSCEEEEESCCCSSSSSC
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCC-CCCcccccCCccCCceec
Confidence            589999999999999999876   4568899999999999999999999999999999998 899999999999999999


Q ss_pred             CCCCCCCCcceEEEEec-CCCcceeeeccccCcCCCceEeecCCCCCCCCccccCCCCCCCCccccCCC----CCCccch
Q 026056          104 NGLTAKPPATLAEFTTG-SGTQDFYDVSLVDGYNLPMIVEPIGGSGTCLSTGCVTDLNQRCPAELRDQS----GEGCKSA  178 (244)
Q Consensus       104 ~g~g~~ppaTlaEftl~-~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~----~~~C~Sa  178 (244)
                      ++.+++||+|||||+|+ .+++|||||||||||||||+|+|++|.+.|+.++|.+|||..||.||||++    .+||+||
T Consensus        80 ~g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~sa  159 (222)
T 2ahn_A           80 NGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSA  159 (222)
T ss_dssp             TTCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCH
T ss_pred             CCCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEeccccc
Confidence            99888999999999994 557999999999999999999999876789999999999999999999963    2599999


Q ss_pred             hhhcCCCcccccCCCCCCCCCCCccchHHhhhcCCCcccccCCCCCCceeecC-CceEEEecC
Q 026056          179 CEAFGNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTG-ADYTITFCP  240 (244)
Q Consensus       179 C~a~~~~~yCC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~-~~y~VtFCP  240 (244)
                      |.+|++|||||+|+|++|++|+|+.||++||++||+||||||||++|+|+|++ ++|+|||||
T Consensus       160 C~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          160 CVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             ccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            99999999999999999999999999999999999999999999999999985 699999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 244
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 2e-77
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 1e-75
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 2e-73
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  230 bits (587), Expect = 2e-77
 Identities = 97/217 (44%), Positives = 123/217 (56%), Gaps = 14/217 (6%)

Query: 27  ATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPP-TWSGRFWGRTGCTFDPT 85
           A FT+VN+C + VW   +        G +L  G S  +  P  T + R W RTGC FD  
Sbjct: 1   AVFTVVNQCPFTVWAASVPVG----GGRQLNRGESWRITAPAGTTAARIWARTGCKFD-A 55

Query: 86  TGQGSCTTGDCGSNQIECNGLTAKPPATLAEFT-TGSGTQDFYDVSLVDGYNLPMIVEPI 144
           +G+GSC TGDCG   ++C G   + P TLAE+        DF+D+SL+DG+N+PM   P 
Sbjct: 56  SGRGSCRTGDCG-GVLQCTG-YGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPD 113

Query: 145 GGSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAFGNPEYCCSGAYATPSTCKPSVY 204
           GGSG      C  D+N RCPAELR      C +AC  F   EYCC G+    + C P+ Y
Sbjct: 114 GGSGCSRGPRCAVDVNARCPAELR--QDGVCNNACPVFKKDEYCCVGSA--ANDCHPTNY 169

Query: 205 SEMFKSACPRSYSYAYDDATSTFTC-TGADYTITFCP 240
           S  FK  CP +YSY  DDATSTFTC  G +Y + FCP
Sbjct: 170 SRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206


>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query244
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=1.2e-80  Score=538.57  Aligned_cols=203  Identities=44%  Similarity=0.962  Sum_probs=189.2

Q ss_pred             ceEEEEEcCCCCccccceecCCcCCCCCeeeCCCCeeEEEcCCCC-ceeeeecccCCCCCCCCCCCccCCCCCCcccccC
Q 026056           26 GATFTMVNRCSYAVWPGILGNAKLDSTGFELTPGSSRSVQVPPTW-SGRFWGRTGCTFDPTTGQGSCTTGDCGSNQIECN  104 (244)
Q Consensus        26 ~~t~ti~N~C~~tVwp~~~~~~~~~~~g~~L~~G~s~s~~vp~~W-sGriWaRtgCs~~~~~g~~~C~TGdCg~g~~~C~  104 (244)
                      +++|||+|||+|||||+++++    .+||+|+||++++|.+|++| +|||||||||++|+ .|+++|+||||| |+|+|+
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~----~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~-~G~~~C~TGdCg-g~l~C~   74 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPV----GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDG-AGRGWCQTGDCG-GVLECK   74 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETT----TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECT-TSBEEEEESCCT-TBSSCS
T ss_pred             CCEEEEEeCCCCCcccccccC----CCCcccCCCCceEEECCCCCcccceeecCCCCcCC-CCccceeccCcC-CeEecC
Confidence            468999999999999999865    57999999999999999998 59999999999998 899999999998 899999


Q ss_pred             CCCCCCCcceEEEEe-cCCCcceeeeccccCcCCCceEeecC-CCCCCCCccccCCCCCCCCccccCCCCCCccchhhhc
Q 026056          105 GLTAKPPATLAEFTT-GSGTQDFYDVSLVDGYNLPMIVEPIG-GSGTCLSTGCVTDLNQRCPAELRDQSGEGCKSACEAF  182 (244)
Q Consensus       105 g~g~~ppaTlaEftl-~~~~~d~YDVSlVdG~NlP~~i~p~~-g~~~C~~~~C~~dln~~CP~~l~v~~~~~C~SaC~a~  182 (244)
                      +.| +||+||||||| +.+++|||||||||||||||+|+|.+ +...|+.++|.+|||..||.||||++  +|+|||.+|
T Consensus        75 ~~G-~pP~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~--~C~saC~~~  151 (208)
T d1auna_          75 GWG-KPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG--GCNNPCTTF  151 (208)
T ss_dssp             SCC-CSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT--EECCHHHHT
T ss_pred             CCC-CCCcceEEEEeccCCCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC--CCccceeec
Confidence            874 79999999999 45679999999999999999999986 45689999999999999999999976  699999999


Q ss_pred             CCCcccccCCCCCCCCCCCccchHHhhhcCCCcccccCCCCCCceeecC--CceEEEecCCC
Q 026056          183 GNPEYCCSGAYATPSTCKPSVYSEMFKSACPRSYSYAYDDATSTFTCTG--ADYTITFCPSV  242 (244)
Q Consensus       183 ~~~~yCC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~DD~ts~ftC~~--~~y~VtFCP~~  242 (244)
                      ++|||||+     +++|+|++|+++||++||+||||||||++|+|+|++  ++|+|||||.+
T Consensus       152 ~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~g  208 (208)
T d1auna_         152 GGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG  208 (208)
T ss_dssp             CSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred             CCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCCC
Confidence            99999997     578999999999999999999999999999999974  78999999975



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure