Citrus Sinensis ID: 026211

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIHIHKHNSKRQQQAICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLKGL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccEcccccHHHHHHHHHHHHHcccccccccccHHHHEcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcHHHHHccc
Coil and Loop (DISEMBL)
MATQFLSTANSflsstlpssssspssssslsnptlihiHKHNSKRQQQAICKAftqsptpaplpsitkrnlsISFITGFVfsslagggngkgcfDANAAILEAEDDEELLEKVKKDRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSvlgrstetDWVQKANQAFTklssspeemtevDAFNSSLASLISSVtkndiessKVAFVASASAFEKWTSLTGLVEQLKGL
Flexible Loop (DISEMBL)
MATQFLSTANSFlsstlpssssspsssssLSNPTLIHIHKHNSKRQQQAICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKdrkkrlekqsalsssmkekgylQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTklssspeeMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLKGL
Low Complexity Region (SEG)
MATQFLSTAnsflsstlpssssspssssslsnptlIHIHKHNSKRQQQAICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFdanaaileaeddeellekvkkdrkkrlekQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIesskvafvasasafekWTSLTGLVEQLKGL
Disordered region (IsUnstruct)
*****************************************************************ITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAIL**********************************YLQDLVYKLSKVGEAIEK*************************************************************KVAFVASASAFEKWTSLTGLV******
Disordered Region (DISOPRED)
*******TANSFL******************************************************KRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLE************************YLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQ********************SLAS***************AFVASASAFEKWTSLTGLVEQLKGL
Disordered Region (DISEMBL)
********************************PTLIHIHK********AICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKK****************KEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLKGL
Disordered Region (DISPRO)
*******************************NPTLIHIHKHNSKRQQQAICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSS*********AFNS*L*SLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLKGL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIHIHKHNSKRQQQAICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDxxxxxxxxxxxxxxxxxxxxxRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLKGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	241	2.2.26 [Sep-21-2011]
O22773	216	Thylakoid lumenal 16.5 kD	yes	no	0.713	0.796	0.695	3e-63

>sp|O22773|TL16_ARATH Thylakoid lumenal 16.5 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At4g02530 PE=1 SV=3

 Score =  241 bits (615), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 121/174 (69%), Positives = 146/174 (83%), Gaps = 2/174 (1%)

Query: 68  KRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDRKKRLEKQSAL 127
           +R LS+ F++  V   L    N +   DANAAILEA+DDEELLEKVK+DRKKR+E+Q+ L
Sbjct: 45  RRELSLGFMSSLVAIGLVS--NDRRRHDANAAILEADDDEELLEKVKQDRKKRIERQAVL 102

Query: 128 SSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSSSPE 187
           +S++KEKGYLQDLVYKLSKVG+AIE NDL AA  VLG+  +T+WV+  N AFTKLS+SPE
Sbjct: 103 NSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKLSTSPE 162

Query: 188 EMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLKGL 241
           E TEV+AFNSSLASLI+SV KNDIESSK+AFV+SA AFEKWT+LTGL+EQLKGL
Sbjct: 163 ENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
225445561	234	PREDICTED: thylakoid lumenal 16.5 kDa pr	0.966	0.995	0.698	2e-75
449443065	238	PREDICTED: thylakoid lumenal 16.5 kDa pr	0.966	0.978	0.670	8e-74
356517028	229	PREDICTED: thylakoid lumenal 16.5 kDa pr	0.937	0.986	0.635	2e-71
224087120	236	predicted protein [Populus trichocarpa]	0.958	0.978	0.650	1e-68
255572525	238	Thylakoid lumenal 16.5 kDa protein, chlo	0.813	0.823	0.689	2e-68
356567684	227	PREDICTED: thylakoid lumenal 16.5 kDa pr	0.929	0.986	0.647	1e-67
255638118	227	unknown [Glycine max]	0.929	0.986	0.647	1e-67
388503586	223	unknown [Medicago truncatula]	0.921	0.995	0.619	1e-64
357478143	223	Thylakoid lumenal 16.5 kDa protein [Medi	0.921	0.995	0.619	1e-64
224142609	235	predicted protein [Populus trichocarpa]	0.954	0.978	0.642	6e-63

>gi|225445561|ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic isoform 1 [Vitis vinifera] gi|297738978|emb|CBI28223.3| unnamed protein product [Vitis vinifera]

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/242 (69%), Positives = 198/242 (81%), Gaps = 9/242 (3%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIHIHKHNSKRQQQAICKAFTQSPTP 60
           MAT FLSTAN+FL S+  SSSSS SSSSS    T I+ H+HN KRQ   + KA ++ P P
Sbjct: 1   MATTFLSTANTFLPSSSSSSSSSSSSSSSSLAATHIYPHRHNVKRQL-TLSKAVSE-PRP 58

Query: 61  APLPSITKRNLSISFITGFVFSSLAGGGNGKGCF-DANAAILEAEDDEELLEKVKKDRKK 119
           +  P ITKR+LSI+ +T  VFS LAG    KG + DANAAILEA+DDEELLEKVKKDRKK
Sbjct: 59  SS-PIITKRSLSITLLTSLVFS-LAG----KGYYSDANAAILEADDDEELLEKVKKDRKK 112

Query: 120 RLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAF 179
           R+EKQ  +SSS KE GYLQ+LVYKLSKVG+AI+ NDL+AASS LG +T+ DWVQKAN AF
Sbjct: 113 RIEKQGVISSSNKETGYLQELVYKLSKVGQAIDNNDLSAASSFLGSNTDADWVQKANIAF 172

Query: 180 TKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLK 239
           TKLSSSPEE +EVDAFNSSLASLISSV +ND+ESSK+AFV+SA+AFEKWT+LTGLV +LK
Sbjct: 173 TKLSSSPEEKSEVDAFNSSLASLISSVVRNDMESSKIAFVSSATAFEKWTTLTGLVGRLK 232

Query: 240 GL 241
           GL
Sbjct: 233 GL 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443065|ref|XP_004139301.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Cucumis sativus] gi|449493633|ref|XP_004159385.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Cucumis sativus]

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 165/246 (67%), Positives = 193/246 (78%), Gaps = 13/246 (5%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIH-----IHKHNSKRQQQAICKAFT 55
           MAT FLSTAN+F SST  S SSS SSSSS   P LI      ++ HN+ ++   ICK  +
Sbjct: 1   MATAFLSTANTFHSSTPSSPSSSSSSSSSYFTPPLIRSRFGCLYCHNNTKRL-VICK--S 57

Query: 56  QSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKK 115
            S  P+ +P++TKR LSI FI+ F+F  +     G+G  DANAAILEA+DDEELLEKVKK
Sbjct: 58  SSDPPSKIPALTKRTLSICFISSFIFPLV-----GQGFSDANAAILEADDDEELLEKVKK 112

Query: 116 DRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKA 175
           DRKKRLEKQ  +SS+ KEKGYLQ+LVYKLSKVG+AI+ ND + ASSVLG S++ DWV+KA
Sbjct: 113 DRKKRLEKQGVISSANKEKGYLQELVYKLSKVGQAIDNNDFSTASSVLGGSSDADWVKKA 172

Query: 176 NQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLV 235
           N AF KLSSSPEE +EVDAFNSSLASLISSVTKND+ESSK AFVASASAFEKWT+L GLV
Sbjct: 173 NSAFNKLSSSPEEKSEVDAFNSSLASLISSVTKNDVESSKTAFVASASAFEKWTALAGLV 232

Query: 236 EQLKGL 241
            QLKGL
Sbjct: 233 GQLKGL 238

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517028|ref|XP_003527192.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like isoform 1 [Glycine max]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 155/244 (63%), Positives = 180/244 (73%), Gaps = 18/244 (7%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIH---IHKHNSKRQQQAICKAFTQS 57
           MAT  LST+N FL +       +  SSSS   PT ++   I K   KR+   +CKA  Q 
Sbjct: 1   MATNILSTSNPFLLT-------NSFSSSSFVTPTYVYYNPIMKCTVKREL-TLCKAANQP 52

Query: 58  PTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDR 117
             P     +TKR LSISFIT FV S LA   N      ANAAILEA+DDEELLEKVK+DR
Sbjct: 53  APPHSPIVVTKRGLSISFITSFVLS-LASKKN------ANAAILEADDDEELLEKVKRDR 105

Query: 118 KKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQ 177
           KKRLEKQ  +SSS +E GYLQDLVYKLS VG+A+EKNDL+AA SVLG + + DWVQ+AN 
Sbjct: 106 KKRLEKQGVISSSKQETGYLQDLVYKLSTVGQALEKNDLSAAGSVLGGNADADWVQRANI 165

Query: 178 AFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQ 237
           AF KLSSSPEE TEVD+FNSSLASLISSV+KND+ESSK+AFV+SA+AFEKWTS+TGL  Q
Sbjct: 166 AFNKLSSSPEEKTEVDSFNSSLASLISSVSKNDVESSKIAFVSSATAFEKWTSMTGLAAQ 225

Query: 238 LKGL 241
           LKGL
Sbjct: 226 LKGL 229

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087120|ref|XP_002308073.1| predicted protein [Populus trichocarpa] gi|222854049|gb|EEE91596.1| predicted protein [Populus trichocarpa]

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/246 (65%), Positives = 190/246 (77%), Gaps = 15/246 (6%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIHI--HKHNSKRQQQAICKAFT-QS 57
           MAT FL TA  FLSS    SS+  S SS  + P L+     K  +  +   +CK  + +S
Sbjct: 1   MATAFLLTAKPFLSS----SSTPSSLSSLTNTPVLLSCAQQKKCNATRPLTLCKTLSDES 56

Query: 58  P--TPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKK 115
           P  T +P+  ITKR+LSI F+T FVFS LA  G+      ANAAILEA+DDEEL+EKVK+
Sbjct: 57  PPVTHSPVI-ITKRSLSICFLTSFVFS-LASRGDSS----ANAAILEADDDEELMEKVKR 110

Query: 116 DRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKA 175
           DRKKRLEKQ  +SS+ +EKGYLQDLVYKLSKVG+AI+KNDL+ ASSVLG ST+TDWV+KA
Sbjct: 111 DRKKRLEKQGVISSANQEKGYLQDLVYKLSKVGQAIDKNDLSTASSVLGGSTDTDWVRKA 170

Query: 176 NQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLV 235
           N AFTKLSSSP+E T+VD+FNSSLASLISSVT NDIESSK AFV+SA+AFEKWT+LTGLV
Sbjct: 171 NIAFTKLSSSPDEKTQVDSFNSSLASLISSVTGNDIESSKTAFVSSATAFEKWTALTGLV 230

Query: 236 EQLKGL 241
            QLKGL
Sbjct: 231 GQLKGL 236

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572525|ref|XP_002527197.1| Thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative [Ricinus communis] gi|223533462|gb|EEF35210.1| Thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative [Ricinus communis]

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 140/203 (68%), Positives = 162/203 (79%), Gaps = 7/203 (3%)

Query: 39  HKHNSKRQQQAICKAFTQSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANA 98
            K+N+KR    +CKA ++S  P   P I+KR+LS+ FIT FVFS L   GN      ANA
Sbjct: 43  QKNNAKRPI-ILCKALSESAPPTS-PIISKRSLSVCFITSFVFS-LTSRGNS----SANA 95

Query: 99  AILEAEDDEELLEKVKKDRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAA 158
           AILEA+DDEELLEKVKKDRKKR+E+Q  +SSS KEKGYLQD+VYKLSKVG+AIE NDL  
Sbjct: 96  AILEADDDEELLEKVKKDRKKRIERQGVISSSNKEKGYLQDVVYKLSKVGQAIENNDLTT 155

Query: 159 ASSVLGRSTETDWVQKANQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAF 218
           A+SVLG +T+TDWVQKAN AF KLSSSP E  +VD FNSSLASLISSV +NDIESSK AF
Sbjct: 156 ANSVLGGTTDTDWVQKANLAFDKLSSSPAEKNQVDTFNSSLASLISSVVRNDIESSKTAF 215

Query: 219 VASASAFEKWTSLTGLVEQLKGL 241
           V+SA+AFE WT+LTGLV QLKGL
Sbjct: 216 VSSATAFETWTTLTGLVAQLKGL 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567684|ref|XP_003552047.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Glycine max]

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/244 (64%), Positives = 179/244 (73%), Gaps = 20/244 (8%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSL---SNPTLIHIHKHNSKRQQQAICKAFTQS 57
           MA   LST+N  L  +   SSSS S    +   SNP    I K  SKR+   +CKA   S
Sbjct: 1   MAKNILSTSNPILLPSSSPSSSSSSFVKPIHVCSNP----IIKSTSKREL-TLCKATPHS 55

Query: 58  PTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDR 117
           P       +TKR LSISFIT FV S LAG  N      ANAAILEA+DDEELLEKVK+DR
Sbjct: 56  PIV-----VTKRGLSISFITSFVLS-LAGKKN------ANAAILEADDDEELLEKVKRDR 103

Query: 118 KKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQ 177
           KKRLEKQ  +SSS +E GYLQDLVYKLS VG+A+EKNDL+AA SVLG ST+ DWVQ+AN 
Sbjct: 104 KKRLEKQGVISSSKQETGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANI 163

Query: 178 AFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQ 237
           AF KLSSS EE TEVDAFNSSLASLISSV+K D+ESSK+AFV+SA+AFEKWTS+TGL  Q
Sbjct: 164 AFNKLSSSSEEKTEVDAFNSSLASLISSVSKKDVESSKIAFVSSATAFEKWTSMTGLAAQ 223

Query: 238 LKGL 241
           LKGL
Sbjct: 224 LKGL 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638118|gb|ACU19373.1| unknown [Glycine max]

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/244 (64%), Positives = 179/244 (73%), Gaps = 20/244 (8%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSL---SNPTLIHIHKHNSKRQQQAICKAFTQS 57
           MA   LST+N  L  +   SSSS S    +   SNP    I K  SKR+   +CKA   S
Sbjct: 1   MAKNILSTSNPILLPSSSPSSSSSSFVKPIHVCSNP----IIKSTSKREL-TLCKAAPHS 55

Query: 58  PTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDR 117
           P       +TKR LSISFIT FV S LAG  N      ANAAILEA+DDEELLEKVK+DR
Sbjct: 56  PIV-----VTKRGLSISFITSFVLS-LAGKKN------ANAAILEADDDEELLEKVKRDR 103

Query: 118 KKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQ 177
           KKRLEKQ  +SSS +E GYLQDLVYKLS VG+A+EKNDL+AA SVLG ST+ DWVQ+AN 
Sbjct: 104 KKRLEKQGVISSSKQETGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANI 163

Query: 178 AFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQ 237
           AF KLSSS EE TEVDAFNSSLASLISSV+K D+ESSK+AFV+SA+AFEKWTS+TGL  Q
Sbjct: 164 AFNKLSSSSEEKTEVDAFNSSLASLISSVSKKDVESSKIAFVSSATAFEKWTSMTGLAAQ 223

Query: 238 LKGL 241
           LKGL
Sbjct: 224 LKGL 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503586|gb|AFK39859.1| unknown [Medicago truncatula]

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/242 (61%), Positives = 177/242 (73%), Gaps = 20/242 (8%)

Query: 1   MATQFLSTANSF-LSSTLPSSSSSPSSSSSLSNPTLIHIHKHNSKRQQQAICKAFTQSPT 59
           MA+ FLSTAN F L+S         SS SSL  PT  +     + ++Q   CK   Q   
Sbjct: 1   MASNFLSTANPFHLAS---------SSQSSLVTPTYAYNPIKCNLKRQLTPCKVVNQ--- 48

Query: 60  PAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDRKK 119
             P  S+TKR++SI F+T  V S      +GKG FDANAAILEA+DD ELLEKVKKDRKK
Sbjct: 49  --PSLSVTKRDISIGFMTSLVLSL-----SGKGLFDANAAILEADDDAELLEKVKKDRKK 101

Query: 120 RLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAF 179
           RLEKQ  +SSS KE GYLQDLVYKLS+VG+AIE+NDL +A SVLG+  + DWVQKAN A 
Sbjct: 102 RLEKQGVISSSTKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIAL 161

Query: 180 TKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLK 239
            KLSSSPEE +EVD FNSSLASL+SSV +ND+ESSK+AFV+SASA EKWTSLTGLV +LK
Sbjct: 162 NKLSSSPEEKSEVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLTGLVGKLK 221

Query: 240 GL 241
           G+
Sbjct: 222 GI 223

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478143|ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula] gi|355510412|gb|AES91554.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula]

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/242 (61%), Positives = 177/242 (73%), Gaps = 20/242 (8%)

Query: 1   MATQFLSTANSF-LSSTLPSSSSSPSSSSSLSNPTLIHIHKHNSKRQQQAICKAFTQSPT 59
           MA+ FLSTAN F L+S         SS SSL  PT  +     + ++Q   CK   Q   
Sbjct: 1   MASNFLSTANPFHLAS---------SSQSSLVTPTYAYNPIKCNLKRQLTPCKVVNQ--- 48

Query: 60  PAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKKDRKK 119
             P  S+TKR++SI F+T  V S      +GKG FDANAAILEA+DD ELLEKVKKDRKK
Sbjct: 49  --PSLSVTKRDISIGFMTSLVLSL-----SGKGLFDANAAILEADDDVELLEKVKKDRKK 101

Query: 120 RLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAF 179
           RLEKQ  +SSS KE GYLQDLVYKLS+VG+AIE+NDL +A SVLG+  + DWVQKAN A 
Sbjct: 102 RLEKQGVISSSTKETGYLQDLVYKLSEVGQAIEQNDLTSAGSVLGKGKDADWVQKANIAL 161

Query: 180 TKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLVEQLK 239
            KLSSSPEE +EVD FNSSLASL+SSV +ND+ESSK+AFV+SASA EKWTSLTGLV +LK
Sbjct: 162 NKLSSSPEEKSEVDTFNSSLASLVSSVAQNDVESSKIAFVSSASAIEKWTSLTGLVGKLK 221

Query: 240 GL 241
           G+
Sbjct: 222 GI 223

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142609|ref|XP_002324647.1| predicted protein [Populus trichocarpa] gi|222866081|gb|EEF03212.1| predicted protein [Populus trichocarpa]

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 158/246 (64%), Positives = 182/246 (73%), Gaps = 16/246 (6%)

Query: 1   MATQFLSTANSFLSSTLPSSSSSPSSSSSLSNPTLIHI--HKHNSKRQQQAICKAFTQSP 58
           MAT FLSTA  FLSS     S+  S SS  + P L      K N +R   + CKA +   
Sbjct: 1   MATTFLSTAKPFLSS-----STPSSLSSLTNRPLLFSCPQQKCNPRRPLPS-CKALSDES 54

Query: 59  TPAPLPS---ITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLEKVKK 115
            P P  S   ITKR+LSI F+T FVFS  + G +      +NAAILEA+DDEELLEKVK+
Sbjct: 55  LPVPAASPIIITKRSLSICFLTSFVFSLASRGSSS-----SNAAILEADDDEELLEKVKR 109

Query: 116 DRKKRLEKQSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKA 175
           DRKKRLE+Q  +SS+ KEKGYLQDLVYKLSKVG+AI+ NDL+ ASSVLG ST+TDWV+KA
Sbjct: 110 DRKKRLERQGVISSANKEKGYLQDLVYKLSKVGQAIDNNDLSTASSVLGGSTDTDWVKKA 169

Query: 176 NQAFTKLSSSPEEMTEVDAFNSSLASLISSVTKNDIESSKVAFVASASAFEKWTSLTGLV 235
           N AFTKLSSSPEE  EVD FNSSL+SLISSVT NDIESSK AFV+SA+AFEKWT+LTGL 
Sbjct: 170 NIAFTKLSSSPEEKIEVDTFNSSLSSLISSVTSNDIESSKTAFVSSATAFEKWTTLTGLF 229

Query: 236 EQLKGL 241
            QLKGL
Sbjct: 230 GQLKGL 235

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
TAIR|locus:2132323	216	AT4G02530 "AT4G02530" [Arabido	0.489	0.546	0.644	8.3e-35

TAIR|locus:2132323 AT4G02530 "AT4G02530" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 76/118 (64%), Positives = 90/118 (76%)

Query:   124 QSALSSSMKEKGYLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLS 183
             Q+ L+S++KEKGYLQDLVYKLSKVG+AIE NDL AA  VLG+  +T+WV+  N AFTKLS
Sbjct:    99 QAVLNSAVKEKGYLQDLVYKLSKVGQAIENNDLPAAGLVLGKGIDTEWVKTVNLAFTKLS 158

Query:   184 SSPEEMTEVDAFNSSLASLISSVTKNDIXXXXXXXXXXXXXXXXWTSLTGLVEQLKGL 241
             +SPEE TEV+AFNSSLASLI+SV KNDI                WT+LTGL+EQLKGL
Sbjct:   159 TSPEENTEVEAFNSSLASLITSVNKNDIESSKLAFVSSAGAFEKWTTLTGLLEQLKGL 216


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.125   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       170   0.00086  108 3  11 23  0.44    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  130 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.44u 0.09s 16.53t   Elapsed:  00:00:01
  Total cpu time:  16.44u 0.09s 16.53t   Elapsed:  00:00:01
  Start:  Fri May 10 03:10:15 2013   End:  Fri May 10 03:10:16 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009543 "chloroplast thylakoid lumen" evidence=IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22773	TL16_ARATH	No assigned EC number	0.6954	0.7136	0.7962	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
TIGR03042	142	PS_II_psbQ_bact photosystem II protein PsbQ. This	91.8

>TIGR03042 PS_II_psbQ_bact photosystem II protein PsbQ

Probab=91.80  E-value=6.8  Score=33.38  Aligned_cols=91  Identities=15%  Similarity=0.279  Sum_probs=68.1

Q ss_pred             hHHHHHHHHHhhhhhhhcCChhHhHhhhcCCCCchHHHHHHHHhhhccC--ChhhhhhH----HHHHhhHHHHHHhhccC
Q 026211          136 YLQDLVYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSS--SPEEMTEV----DAFNSSLASLISSVTKN  209 (241)
Q Consensus       136 yvQdaVYKLSKvGqAIe~gDL~~AasvLg~~~d~dWV~~~~~Af~klSs--s~eek~~~----dtF~sSlasL~ssv~~g  209 (241)
                      .+|.+--.|.+....|+++|....-+.+-+.     .+++..-.+.+..  .|++|+++    ..+...|..|=-+...+
T Consensus        44 ~i~~~~~r~~eLk~lI~kk~W~~vrn~irgp-----~g~Lr~dl~~l~~sl~p~dqk~a~~L~~~Lf~~L~~LD~AA~~k  118 (142)
T TIGR03042        44 GIEAAKDRLPELASLVAKEDWVFTRNLIHGP-----MGEVRREMTYLNQSLLPKDQKEALALAKELKDDLEKLDEAARLQ  118 (142)
T ss_pred             HHHHHHHhhHHHHHHHhhcchHHHHHHHhcc-----HHHHHHHHHHHHHccCHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3566778899999999999999988888653     3333333333333  35555554    56678888999999999


Q ss_pred             chhhhHHHHHhhhHHHHHHHHh
Q 026211          210 DIESSKVAFVASASAFEKWTSL  231 (241)
Q Consensus       210 D~~ssK~AFVsSA~ALe~Was~  231 (241)
                      |...+-.+|--.+.+|.++..+
T Consensus       119 d~~~a~k~Y~~av~~~dafl~~  140 (142)
T TIGR03042       119 DGPQAQKAYQKAAADFDAYLDL  140 (142)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999988653

This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	241
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 1e-05
 Identities = 43/254 (16%), Positives = 75/254 (29%), Gaps = 71/254 (27%)

Query: 10  NSFLSSTLPSSSSSPSSSSSLSNPTLIHIHKHNSKR----QQQAIC-------------K 52
              L    P+ +S    SS++     IH  +   +R    +    C              
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNI--KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 53  AFT-QSPTPAPLPSITKRNLSISFITGFVFSSLAGGGNGKGCFDANAAILEAEDDEELLE 111
           AF         L  +T R          V   L+         D ++  L  ++ + LL 
Sbjct: 261 AFNLSCKI---L--LTTRFKQ-------VTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 112 KVKKDRKKRLEKQ---------SALSSSMKE-----KGYLQDLVYKLSKVGEAIEKNDLA 157
           K    R + L ++         S ++ S+++       +         K+   IE   L 
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH---VNCDKLTTIIES-SLN 364

Query: 158 AASSVLGRSTETDWVQKANQAFTKLSSSPEE---MTEVDAFNSSLASLISSVTKNDIESS 214
                  R           + F +LS  P      T +      L+ +   V K+D+   
Sbjct: 365 VLEPAEYR-----------KMFDRLSVFPPSAHIPTIL------LSLIWFDVIKSDVMVV 407

Query: 215 KVAFVASASAFEKW 228
            V  +   S  EK 
Sbjct: 408 -VNKLHKYSLVEKQ 420

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 42.1 bits (98), Expect = 4e-05
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 15/85 (17%)

Query: 98  AAILEAEDDEELLEKVKKDRKKRLEKQSALSSSMKE------KGYLQDLVYKLSKVGEAI 151
           A       + E + K +++++KRL++  A S  M++      K  L++   +  +  E +
Sbjct: 75  AQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEW-NQ--RQSEQV 131

Query: 152 EKNDLAAASSVLGRSTETDWVQKAN 176
           EKN     ++   R  +  + Q+ +
Sbjct: 132 EKN---KINN---RIADKAFYQQPD 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	241
d1nzea_	112	Oxygen-evolving enhancer protein 3, {Spinach (Spin	88.83

>d1nzea_ a.24.18.1 (A:) Oxygen-evolving enhancer protein 3, {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: Oxygen-evolving enhancer protein 3,
family: Oxygen-evolving enhancer protein 3,
domain: Oxygen-evolving enhancer protein 3,
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=88.83  E-value=1.2  Score=32.68  Aligned_cols=88  Identities=11%  Similarity=0.100  Sum_probs=66.9

Q ss_pred             HHHHHhhhhhhhcCChhHhHhhhcCCCCchHHHHHHHHhhhccC--Chhhhhh----HHHHHhhHHHHHHhhccCchhhh
Q 026211          141 VYKLSKVGEAIEKNDLAAASSVLGRSTETDWVQKANQAFTKLSS--SPEEMTE----VDAFNSSLASLISSVTKNDIESS  214 (241)
Q Consensus       141 VYKLSKvGqAIe~gDL~~AasvLg~~~d~dWV~~~~~Af~klSs--s~eek~~----~dtF~sSlasL~ssv~~gD~~ss  214 (241)
                      -..|-.++..|++++...+-..|-.     =++++-.-++.+.+  .|++|.+    ...|..+|..|--++..+|...+
T Consensus        19 a~~L~~l~~lI~k~~W~~v~~~Lr~-----~~~~Lr~dl~~li~~~~~~~k~~~~~la~~lf~~le~LD~Aar~kd~~~a   93 (112)
T d1nzea_          19 ASEILNVKQFIDRKAWPSLQNDLRL-----RASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEA   93 (112)
T ss_dssp             HHHHHTTHHHHHTTCHHHHHHHHHH-----HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHH-----HHHHHHHHHHHHHHhCCHhhhHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            3456667777888888877777764     34555555666633  3444443    46899999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHhhc
Q 026211          215 KVAFVASASAFEKWTSLTG  233 (241)
Q Consensus       215 K~AFVsSA~ALe~Was~tG  233 (241)
                      ..+|--.+.+|.+|.+.-|
T Consensus        94 ~~~Y~~t~~~ld~~la~lg  112 (112)
T d1nzea_          94 EKYYGQTVSNINEVLAKLG  112 (112)
T ss_dssp             HHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHhcC
Confidence            9999999999999987654