Citrus Sinensis ID: 026238

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHEEEEEEEEcc
Coil and Loop (DISEMBL)
mnwnapinswwRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAdlgvdapvtQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNflvnkayqfssitsvtlLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLlsdaggdggggsrpllGDVLVIAGTIFFatsnvgeeffvkkkdRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Flexible Loop (DISEMBL)
mnwnapinswwRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFatsnvgeeffvkkkdrVEVVCMIGVYGLLVSAVQLSILELkslesvewstnivsnlllnnl
Low Complexity Region (SEG)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQllgaalcvlglglvllsdaggdggggsrpllgdvLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Disordered region (IsUnstruct)
***NAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLL***
Disordered Region (DISOPRED)
********SWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA******GSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Disordered Region (DISEMBL)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Disordered Region (DISPRO)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLLLNNL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	241	2.2.26 [Sep-21-2011]
Q5T1Q4	408	Solute carrier family 35	yes	no	0.850	0.502	0.383	6e-35
Q8BGK5	408	Solute carrier family 35	yes	no	0.850	0.502	0.392	2e-34
Q8IXU6	374	Solute carrier family 35	no	no	0.850	0.548	0.373	5e-34
Q7TML3	375	Solute carrier family 35	no	no	0.850	0.546	0.373	7e-33
Q0V9U2	391	Solute carrier family 35	no	no	0.850	0.524	0.353	6e-31
O59785	505	Uncharacterized solute ca	yes	no	0.867	0.413	0.292	1e-19

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  147 bits (371), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 124/214 (57%), Gaps = 9/214 (4%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  ++ D   + PV QS   Y  L LVY   L  R+        L
Sbjct: 66  LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y++LG +D++ N+LV KAYQ++++TS+ LLDC  I   I+L+W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 138 LLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +G  +C+LG+G ++ +D   G   G G   L+GD+LV+ G   +  SNV EE+ ++   
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWS 229
           RVE + MIG++G   S +QL+I+E K L  V W 
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWD 279

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  146 bits (368), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 123/214 (57%), Gaps = 9/214 (4%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  +A D   + PV QS   Y  L LVY   L  R+        L
Sbjct: 66  LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y++LG +D++ N+LV KAYQ++++TSV LLDC  I   I+L+W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 138 LLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +G  +C+LG+G ++ +D   G   G G   L+GD+LV+ G   +  SNV EE  ++   
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWS 229
           RVE + MIG++G   S +QL+I+E K L  V W 
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWD 279

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  144 bits (363), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 129/214 (60%), Gaps = 9/214 (4%)

Query: 25  LGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L L+Y  +L +R         L
Sbjct: 45  LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           +  W+ Y+LLG  DV+ N+++ +AYQ++++TSV LLDC  I   + L+W  L  RY +  
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164

Query: 138 LLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +  A+C+LG+G ++ +D  AG +   GS  L+GD+LV+ G   +A SNV EE+ VKK  
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWS 229
           R E + M+G++G ++S +QL I+E K + S+ W 
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWD 258

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  140 bits (354), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 128/214 (59%), Gaps = 9/214 (4%)

Query: 25  LGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVLLYRR------QRL 77
           LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L LVY  +L ++       + L
Sbjct: 45  LGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLMLAFQSGSDNLLEIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y LLG  DV+ N+L+ +AYQ++++TSV LLDC  I   + L+W  L  RY +  
Sbjct: 105 RRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIH 164

Query: 138 LLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +   +C+LG+G ++ +D  AG +   GS  L+GD+LV+ G   +A SNV EE+ VKK  
Sbjct: 165 FIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLS 224

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWS 229
           R E + M+G++G ++S +QL I+E K +  ++W 
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWD 258

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  134 bits (337), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 13/218 (5%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  ++ D   + P+ QS   Y  L LVY   L  R+        L
Sbjct: 45  LGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           +  W+ Y+ LG +D++  +LV KA+Q+++  S+ LL+C  I   I+L+W FL  RY +  
Sbjct: 105 KRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKVLH 164

Query: 138 LLGAALCVLGLGLVLLSD------AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFV 191
            +GA  C+LG+G +  +D        GD   G   L+GDVLV+ G   +  S+V +E+ V
Sbjct: 165 FIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEYIV 224

Query: 192 KKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWS 229
           +   RVE++ MIG++G   S +QL+I+E K L  V W 
Sbjct: 225 RNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWD 262

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 10/219 (4%)

Query: 22  LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-------R 74
           + FLGQ++S  +   +  +  ++ +  + P  Q+   Y  L LVY    ++R        
Sbjct: 144 VFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALLTLVYTPYTVFRMGFKKYFE 202

Query: 75  QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYS 134
              R  W  Y++  F DV+GN+ V  AYQ++++ S +LLD       ++L+++FL  RY 
Sbjct: 203 MIFRHGW-KYIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSWATVAVVILSFIFLKVRYH 261

Query: 135 LWQLLGAALCVLGLGLVLLSDAGGDGG-GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK 193
             Q+LG   C+ GL L+++SD    G      P LGD  +I G   +  SN  EE+F  K
Sbjct: 262 WSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMIIGATCYGVSNTLEEYFASK 321

Query: 194 KDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNI 232
                V+  + +YG ++S +Q  I +   L ++ W++ +
Sbjct: 322 LPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEM 360

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
297740093	337	unnamed protein product [Vitis vinifera]	0.941	0.673	0.780	5e-98
359481996	352	PREDICTED: solute carrier family 35 memb	0.941	0.644	0.769	2e-96
297740094	337	unnamed protein product [Vitis vinifera]	0.941	0.673	0.723	8e-89
359481998	673	PREDICTED: solute carrier family 35 memb	0.954	0.341	0.714	1e-88
255575633	340	conserved hypothetical protein [Ricinus	0.962	0.682	0.761	6e-83
357511003	363	Solute carrier family 35 member F1 [Medi	0.962	0.639	0.677	1e-74
357511005	349	Solute carrier family 35 member F2 [Medi	0.962	0.664	0.679	2e-74
224134462	267	predicted protein [Populus trichocarpa]	0.775	0.700	0.792	3e-73
297740095	356	unnamed protein product [Vitis vinifera]	0.954	0.646	0.621	1e-70
242088093	347	hypothetical protein SORBIDRAFT_09g02187	0.850	0.590	0.657	1e-68

>gi|297740093|emb|CBI30275.3| unnamed protein product [Vitis vinifera]

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 178/228 (78%), Positives = 205/228 (89%), Gaps = 1/228 (0%)

Query: 7   INSWWRSH-VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALV 65
           ++SWWRSH + LRTLY+LFLGQ+VSF LA+ SF+SS IADLGVDAP+TQS F Y SLALV
Sbjct: 1   MSSWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLALV 60

Query: 66  YGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT 125
           YG +LLYRRQ+LR++WYWYL LGFVDVQGN+LVNKAYQ+SSITSVTLLDC TI W I+LT
Sbjct: 61  YGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVIILT 120

Query: 126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNV 185
           W+FLGTRYSLWQ  GAALC++GLGLVLLSDAG  GG GSRPLLGD+LVIAGT+FFA SNV
Sbjct: 121 WIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180

Query: 186 GEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           GEEF VKKKDRVEVV MIG++GLLVS  ++SI+ELKSLESVEWST+I+
Sbjct: 181 GEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDII 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481996|ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 177/230 (76%), Positives = 205/230 (89%), Gaps = 3/230 (1%)

Query: 5   APINSWWRSH-VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLA 63
           A +++WWRSH + LRTLY+LFLGQ+VSF LA+ SF+SS IADLGVDAP+TQS F Y SLA
Sbjct: 16  ADLDAWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLA 75

Query: 64  LVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIV 123
           LVYG +LLYRRQ+LR++WYWYL LGFVDVQGN+LVNKAYQ+SSITSVTLLDC TI W I+
Sbjct: 76  LVYGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVII 135

Query: 124 LTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATS 183
           LTW+FLGTRYSLWQ  GAALC++GLGLVLLSDAG   G GSRPLLGD+LVIAGT+FFA S
Sbjct: 136 LTWIFLGTRYSLWQFFGAALCIVGLGLVLLSDAG--VGDGSRPLLGDILVIAGTLFFALS 193

Query: 184 NVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           NVGEEF VKKKDRVEVV MIG++GLLVS  ++SI+ELKSLESVEWST+I+
Sbjct: 194 NVGEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDII 243

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740094|emb|CBI30276.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (851), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 165/228 (72%), Positives = 194/228 (85%), Gaps = 1/228 (0%)

Query: 7   INSWWR-SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALV 65
           +NSWWR +  +LRTL++L LGQ+VSF LA+  FTSS IADLGVDAP+TQS F Y  LALV
Sbjct: 1   MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 60

Query: 66  YGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT 125
            G +LLYRRQRL+V+WYWYL LGF+DVQGN+LVNKA+Q+SS+TSV LLDC TI W I+LT
Sbjct: 61  NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 120

Query: 126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNV 185
           W+FLGTRYS+WQ  GAALCV GLGLVLLSDAG  G GGSRPLLGD LVIAGT+  A SNV
Sbjct: 121 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180

Query: 186 GEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           GEEF VKKKDRVE++ M+G++GLLVS  ++SI+ELKSLES+EWST IV
Sbjct: 181 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIV 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481998|ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 165/231 (71%), Positives = 194/231 (83%), Gaps = 1/231 (0%)

Query: 4   NAPINSWWR-SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSL 62
              +NSWWR +  +LRTL++L LGQ+VSF LA+  FTSS IADLGVDAP+TQS F Y  L
Sbjct: 334 ECAMNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCL 393

Query: 63  ALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAI 122
           ALV G +LLYRRQRL+V+WYWYL LGF+DVQGN+LVNKA+Q+SS+TSV LLDC TI W I
Sbjct: 394 ALVNGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVI 453

Query: 123 VLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFAT 182
           +LTW+FLGTRYS+WQ  GAALCV GLGLVLLSDAG  G GGSRPLLGD LVIAGT+  A 
Sbjct: 454 ILTWIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAM 513

Query: 183 SNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           SNVGEEF VKKKDRVE++ M+G++GLLVS  ++SI+ELKSLES+EWST IV
Sbjct: 514 SNVGEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIV 564

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575633|ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis] gi|223531810|gb|EEF33628.1| conserved hypothetical protein [Ricinus communis]

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 179/235 (76%), Positives = 208/235 (88%), Gaps = 3/235 (1%)

Query: 1   MNWNAPINS--WWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFA 58
           MNW    NS  WW+SH TL+ LYLL LGQ+VSF LA+ S TSSL+ DLG+DAP+TQS+F 
Sbjct: 1   MNWYGN-NSCRWWKSHATLKILYLLLLGQVVSFILAVCSLTSSLVVDLGIDAPITQSSFN 59

Query: 59  YFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTI 118
           YF+LALV+G +LLYRRQ+LRV+WYWYLLLGFVDVQGN+LVN+AYQ++SITSVTLLDC TI
Sbjct: 60  YFALALVFGSILLYRRQKLRVSWYWYLLLGFVDVQGNYLVNRAYQYTSITSVTLLDCWTI 119

Query: 119 AWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTI 178
            WAIVLTW FLGTRYS+WQL GAALCVLGLGLVLLSDAG  GGGGSRPLLGD+LVIAGTI
Sbjct: 120 VWAIVLTWFFLGTRYSIWQLFGAALCVLGLGLVLLSDAGVGGGGGSRPLLGDLLVIAGTI 179

Query: 179 FFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           FFA SNVGEEFFVK KDRVEVV M+G++GLLVS VQLS+LELK+L+S+ W+ +I+
Sbjct: 180 FFALSNVGEEFFVKNKDRVEVVAMLGIFGLLVSVVQLSVLELKTLKSINWTADII 234

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511003|ref|XP_003625790.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355500805|gb|AES82008.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 160/236 (67%), Positives = 192/236 (81%), Gaps = 4/236 (1%)

Query: 1   MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF 60
           M+W   I++WW    TL+ L +L LGQLVSF LALMS TSSLIA  GVDAP+TQS F Y 
Sbjct: 1   MDWTT-ISTWWSRTATLQILGILLLGQLVSFLLALMSITSSLIAQFGVDAPLTQSLFTYG 59

Query: 61  SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW 120
           SLALVYG +LLYR Q+  V+WYWYLLLGF D QG +LV KAYQ++S+TSVTLLDC T+ W
Sbjct: 60  SLALVYGSILLYRHQKPLVSWYWYLLLGFADAQGCYLVIKAYQYTSVTSVTLLDCWTVPW 119

Query: 121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA---GGDGGGGSRPLLGDVLVIAGT 177
           AI+LTW+FLGTRYSLWQL G  LCVLGL LVL SD    GG GGGGS+P+LGDVLVI GT
Sbjct: 120 AILLTWIFLGTRYSLWQLCGGTLCVLGLSLVLFSDTWDGGGGGGGGSKPVLGDVLVIVGT 179

Query: 178 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           +F+A SNV EEF VKKKDRVE V M+GVYG LV+A+++S+LELK+L+S++WS++IV
Sbjct: 180 VFYAISNVVEEFCVKKKDRVETVTMLGVYGFLVTAIEVSVLELKTLKSIKWSSDIV 235

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511005|ref|XP_003625791.1| Solute carrier family 35 member F2 [Medicago truncatula] gi|355500806|gb|AES82009.1| Solute carrier family 35 member F2 [Medicago truncatula]

 Score =  285 bits (728), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/237 (67%), Positives = 191/237 (80%), Gaps = 5/237 (2%)

Query: 1   MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF 60
           M+W   I++WW    TL+ L +L LGQLVSF LALMS TSSLIA  GVDAP+TQS F Y 
Sbjct: 1   MDWTT-ISTWWSRTATLQILGILLLGQLVSFLLALMSITSSLIAQFGVDAPLTQSLFTYG 59

Query: 61  SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW 120
           SLALVYG +LLYR Q+  V+WYWYLLLGF D QG +LV KAYQ++S+TSVTLLDC T+ W
Sbjct: 60  SLALVYGSILLYRHQKPLVSWYWYLLLGFADAQGCYLVIKAYQYTSVTSVTLLDCWTVPW 119

Query: 121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA----GGDGGGGSRPLLGDVLVIAG 176
           AI+LTW+FLGTRYSLWQL G  LCVLGL LVL SD     GG GGGGS+P+LGDVLVI G
Sbjct: 120 AILLTWIFLGTRYSLWQLCGGTLCVLGLSLVLFSDTWDGGGGGGGGGSKPILGDVLVIVG 179

Query: 177 TIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           T+FFA SNV EEF VKKKDRVE V M+GVYG LV+A+++S+LELK+L+S++WS +IV
Sbjct: 180 TVFFAVSNVVEEFCVKKKDRVEAVTMLGVYGFLVTAIEVSVLELKTLKSIKWSGDIV 236

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134462|ref|XP_002327411.1| predicted protein [Populus trichocarpa] gi|222835965|gb|EEE74386.1| predicted protein [Populus trichocarpa]

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 149/188 (79%), Positives = 167/188 (88%), Gaps = 1/188 (0%)

Query: 47  GVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSS 106
           GVDAP+TQS+F Y +LAL+YG +LLYRRQ+L+V+WYWYLLLGFVDVQGN+LVNKAYQFSS
Sbjct: 1   GVDAPLTQSSFNYLALALIYGSILLYRRQKLQVSWYWYLLLGFVDVQGNYLVNKAYQFSS 60

Query: 107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-GDGGGGSR 165
           ITSVTLLDC T+AW I LTW FLGTRY+LWQLLGAA+CVLGLGLVLLSDAG     GGS+
Sbjct: 61  ITSVTLLDCWTVAWVIALTWFFLGTRYTLWQLLGAAVCVLGLGLVLLSDAGVAHITGGSK 120

Query: 166 PLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLES 225
           P+LGD LVI GTIFFA SNVGEEF VKKK RVEVV MIGVYG LVSAV+LSI+ELKSLE+
Sbjct: 121 PVLGDFLVITGTIFFALSNVGEEFCVKKKGRVEVVTMIGVYGFLVSAVELSIVELKSLEA 180

Query: 226 VEWSTNIV 233
           V WS +IV
Sbjct: 181 VAWSKDIV 188

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740095|emb|CBI30277.3| unnamed protein product [Vitis vinifera]

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/230 (62%), Positives = 176/230 (76%)

Query: 4   NAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLA 63
           N  +  W R+   LR  Y LFLGQ+VSF +A  SF +S + DLGV+ P+TQS FAY  L 
Sbjct: 20  NEFVLRWIRNERLLRNAYALFLGQVVSFLVAFSSFFTSSVIDLGVNVPLTQSFFAYLCLV 79

Query: 64  LVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIV 123
           LV+G + L RRQ +RV+W WYL LGFVDVQGN+LV KAYQ+SS TSVTLLDC TI WA++
Sbjct: 80  LVFGTIRLGRRQNIRVSWIWYLFLGFVDVQGNYLVKKAYQYSSATSVTLLDCWTIPWAMI 139

Query: 124 LTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATS 183
            TW+ LGTRYS+ Q  GAALCV GL  V LSDAG  GGGGS+P+LGD LV+AGT+F A S
Sbjct: 140 FTWIVLGTRYSIRQFFGAALCVAGLASVFLSDAGAGGGGGSKPILGDTLVVAGTLFLAMS 199

Query: 184 NVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
           NVGEEF VKKKD VEVV MIG +GLLVSA ++ I+E ++L+S++WS +I+
Sbjct: 200 NVGEEFCVKKKDSVEVVAMIGAFGLLVSACEIYIMEFETLKSIKWSPDII 249

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088093|ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor] gi|241945164|gb|EES18309.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 136/207 (65%), Positives = 161/207 (77%), Gaps = 2/207 (0%)

Query: 30  SFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGF 89
           +F +A  SFTSSLIA+LGVDAP+TQS FAY  L LVY  ++L RRQ+L++AWYWYL L F
Sbjct: 21  AFAMAASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAF 80

Query: 90  VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLG 149
            DVQGN+LV KAYQ+S ITSVTLLDC T+ W I+LTW  LGTRYSLWQ +GA  CV GL 
Sbjct: 81  FDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLA 140

Query: 150 LVLLSDAGG--DGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYG 207
           LVLLSDA    +   G  PLLGDVLVIAGT+ FA SNVGEE+ VKKKDRVEVV M+G++G
Sbjct: 141 LVLLSDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFG 200

Query: 208 LLVSAVQLSILELKSLESVEWSTNIVS 234
           LL+S VQ+ I E K LE+V WS  ++S
Sbjct: 201 LLISIVQILIFERKGLEAVTWSPTMIS 227

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.497	0.330	0.508	8.5e-43
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.497	0.353	0.516	5.9e-42
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.904	0.654	0.401	2.9e-39
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.481	0.270	0.393	4.2e-29
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.452	0.267	0.396	4.7e-27
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.452	0.267	0.413	7.2e-27
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.489	0.315	0.352	1e-26
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.514	0.330	0.358	1.3e-26
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.460	0.266	0.405	2.6e-26
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.477	0.288	0.272	7.5e-17

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 61/120 (50%), Positives = 80/120 (66%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQL+S       FTSS +A  G++ P +Q    Y  LA+VYG ++LYRR 
Sbjct:    10 TKKTLIGLGLGQLLSLLATSNGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIMLYRRS 69

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++  WY+Y LL FVDV+ NFLV KAYQ++S+TSV LLDC  I   +VLTW +L T+Y L
Sbjct:    70 DIKAKWYYYFLLAFVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKTKYRL 129

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
 Identities = 62/120 (51%), Positives = 83/120 (69%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQ++S    L++  +S IA  G+ AP +Q+   Y SLA+VYGG++LYRR 
Sbjct:    11 TKKTLIGLGLGQIISLLSTLIASIASEIARKGISAPTSQTFLGYVSLAIVYGGIMLYRRS 70

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++V WY Y LL  VDV+ NFLV KA+Q +S+TS+ LLDC  I   +VLTW+FL TRY L
Sbjct:    71 AIKVKWYHYFLLAVVDVEANFLVVKAFQNTSMTSIMLLDCWAIPCVLVLTWVFLKTRYRL 130

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 88/219 (40%), Positives = 127/219 (57%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQ++S      +FTSS +A  G++AP +Q+  +Y  LA+VYGG++LYRR 
Sbjct:    13 TKKTLIGLGLGQILSLLCTSNAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRP 72

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++  WY Y LL  VDV+GNFLV KA Q++SITS+ LLDC  I   +VLTW+FL T+Y L
Sbjct:    73 TIKGKWYHYFLLALVDVEGNFLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRL 132

Query:   136 WQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXLVIAGTIFFATSNVGEEFFVKKK 194
              +                                   LV+AG   +A SN  EEF VK  
Sbjct:   133 MKISGVFICIAGVVMVLFSDVHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNA 192

Query:   195 DRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIV 233
             D VE++  +G++G ++SA+Q++I E   L+++ WS + V
Sbjct:   193 DTVELMTFMGLFGAIISAIQVAIFEQGELKAIHWSADAV 231

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 215 (80.7 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
 Identities = 48/122 (39%), Positives = 69/122 (56%)

Query:    18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR- 76
             RT   L LGQ++S  L     +S L+ +  V+AP  Q+   YF L  VY   L  +    
Sbjct:    59 RTFKALILGQILSLCLCGTGVSSQLLVNQNVNAPAAQAFSNYFLLCFVYCISLACKNDEN 118

Query:    77 -----LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGT 131
                  LR   + YL+L  +DV+ N+++ KAYQ++++TSV LLDC TI   + L+WLFL  
Sbjct:   119 GLVVVLRKRGWRYLILAIIDVEANYMIVKAYQYTNLTSVQLLDCATIPTVLFLSWLFLSV 178

Query:   132 RY 133
             RY
Sbjct:   179 RY 180

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 205 (77.2 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
 Identities = 46/116 (39%), Positives = 68/116 (58%)

Query:    25 LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
             LGQ++S  +  +  TS  ++ D   + PV QS   Y  L LVY   L  R+        L
Sbjct:    66 LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query:    78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRY 133
             R  W+ Y++LG +D++ N+LV KAYQ++++TS+ LLDC  I   I+L+W FL  RY
Sbjct:   126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRY 181

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 208 (78.3 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
 Identities = 48/116 (41%), Positives = 68/116 (58%)

Query:    25 LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
             LGQ++S  +  +  TS  +A D   + PV QS   Y  L LVY   L  R+        L
Sbjct:    66 LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query:    78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRY 133
             R  W+ Y++LG +D++ N+LV KAYQ++++TSV LLDC  I   I+L+W FL  RY
Sbjct:   126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRY 181

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 189 (71.6 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
 Identities = 44/125 (35%), Positives = 70/125 (56%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVLLYRR 74
             T   L  + LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L L+Y  +L +R 
Sbjct:    36 TWNILKTIALGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRS 95

Query:    75 QR------LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF 128
                     L+  W+ Y+LLG  DV+ N+++ +AYQ++++TSV LLDC  I   + L+W  
Sbjct:    96 GSDNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFI 155

Query:   129 LGTRY 133
             L  RY
Sbjct:   156 LHARY 160

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 190 (71.9 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
 Identities = 47/131 (35%), Positives = 72/131 (54%)

Query:    12 RSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVL 70
             R   T   L  + LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L LVY  +L
Sbjct:    32 RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91

Query:    71 LYRR------QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVL 124
              ++       + LR  W+ Y LLG  DV+ N+L+ +AYQ++++TSV LLDC  I   + L
Sbjct:    92 AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151

Query:   125 TWLFLGTRYSL 135
             +W  L  RY +
Sbjct:   152 SWFILRARYKV 162

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 185 (70.2 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
 Identities = 47/116 (40%), Positives = 70/116 (60%)

Query:    23 LFLGQLVSFTLALMS-FTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR---QRLR 78
             L LGQL+S  +A    F+  L+   GV+ P TQS   Y  L  VY  VL+ R    + ++
Sbjct:    31 LALGQLLSVMIAGTGIFSQLLVKKYGVNIPTTQSLLNYILLC-VYLLVLVKRGVLWETIK 89

Query:    79 VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYS 134
                 ++  L  VD++ N++V KAYQ+++ITSV LLDC TI   +VL+ +FL TR++
Sbjct:    90 TKSIYFAPLALVDLEANYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFT 145

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 143 (55.4 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
 Identities = 33/121 (27%), Positives = 66/121 (54%)

Query:    23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR---RQRLRV 79
             L LGQ ++      +  ++L+A+   + P  Q+ F Y  L +++    +Y+   +    +
Sbjct:    64 LLLGQFLAIANTGTNTFNTLLANKNTNIPAFQTFFNYSLLNIIFTSYTIYKYGIKGWFEM 123

Query:    80 AWY--W-YLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLW 136
              W   W Y++L F DV+GN+ +  AY+++++ S  L++   I   +V+++LFL  RY + 
Sbjct:   124 LWKRGWKYIILSFCDVEGNYFMVLAYEYTTMMSAQLINFWAIVVVVVVSFLFLRVRYHIS 183

Query:   137 Q 137
             Q
Sbjct:   184 Q 184

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00021639001 SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (323 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	241
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	5e-67
pfam08449	303	pfam08449, UAA, UAA transporter family	1e-05

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  209 bits (535), Expect = 5e-67
 Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 8/227 (3%)

Query: 16  TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR- 74
           T RTL  L LGQ++S  +   + TS  +A+ GV+AP  Q+   Y  L LVY G+L +RR 
Sbjct: 9   TKRTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRG 68

Query: 75  -----QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFL 129
                  ++  W+ Y++L  +DV+ N+LV KAYQ++++TSV LLDC  I   +VL+W FL
Sbjct: 69  EKNLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFL 128

Query: 130 GTRYSLWQLLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGE 187
             RY    +LG  +C+LG+  V+ SD  AG    GGS P+LGD+LV+AG   +A SNV E
Sbjct: 129 KVRYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTE 188

Query: 188 EFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVS 234
           EF VKK  R E + M+G++G ++S +Q +I E K+L  + W   I  
Sbjct: 189 EFLVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGL 235

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 10/162 (6%)

Query: 57  FAYFSLALVYGGVLLYRRQRLR---VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL 113
           FA F    + G + L   ++L+   +    Y+L+       + L N+A ++ S  +  + 
Sbjct: 37  FAQFLFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIF 96

Query: 114 DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGS---RPLLGD 170
             C +   ++L  L  G RYS  Q L A L  LG+ +  L+ A              +G 
Sbjct: 97  KSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVG- 155

Query: 171 VLVIAGTIFF--ATSNVGEEFFVK-KKDRVEVVCMIGVYGLL 209
           + ++ G +     T N  E+ + K  K   E++    +  L 
Sbjct: 156 IALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLP 197

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.88
PRK11272	292	putative DMT superfamily transporter inner membran	99.87
KOG2766	336	consensus Predicted membrane protein [Function unk	99.87
PRK11689	295	aromatic amino acid exporter; Provisional	99.86
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.86
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.84
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.84
PRK15430	296	putative chloramphenical resistance permease RarD;	99.84
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.82
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.81
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.78
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.76
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.69
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.64
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.52
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.51
COG2962	293	RarD Predicted permeases [General function predict	99.5
KOG2765	416	consensus Predicted membrane protein [Function unk	99.46
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.46
COG2510	140	Predicted membrane protein [Function unknown]	99.46
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.43
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.35
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.35
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.33
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.25
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.25
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.16
PRK11272	292	putative DMT superfamily transporter inner membran	99.09
PLN00411	358	nodulin MtN21 family protein; Provisional	98.99
PRK11689	295	aromatic amino acid exporter; Provisional	98.94
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.93
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.89
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.85
PRK15430	296	putative chloramphenical resistance permease RarD;	98.78
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.78
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.74
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.69
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.68
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.67
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.63
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.61
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.51
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.44
KOG1581	327	consensus UDP-galactose transporter related protei	98.31
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.28
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.21
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.07
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.07
KOG1580	337	consensus UDP-galactose transporter related protei	98.05
PRK13499	345	rhamnose-proton symporter; Provisional	98.03
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.97
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.9
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.87
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.85
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.8
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.77
COG2076	106	EmrE Membrane transporters of cations and cationic	97.76
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.7
PRK11431	105	multidrug efflux system protein; Provisional	97.7
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	97.69
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.66
KOG1582	367	consensus UDP-galactose transporter related protei	97.6
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.39
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.26
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.15
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.1
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.08
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.91
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.69
COG2962	293	RarD Predicted permeases [General function predict	96.63
PRK13499	345	rhamnose-proton symporter; Provisional	96.59
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.53
KOG1580	337	consensus UDP-galactose transporter related protei	96.33
KOG2765	416	consensus Predicted membrane protein [Function unk	96.04
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.0
KOG1581	327	consensus UDP-galactose transporter related protei	95.91
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.81
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.72
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.03
PRK02237	109	hypothetical protein; Provisional	94.44
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.81
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	93.64
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	93.32
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	93.08
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.75
KOG1582	367	consensus UDP-galactose transporter related protei	91.97
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	91.63
KOG1443	349	consensus Predicted integral membrane protein [Fun	89.03
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	88.96
COG1742	109	Uncharacterized conserved protein [Function unknow	88.59
KOG4831	125	consensus Unnamed protein [Function unknown]	88.47
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	88.18
COG2510	140	Predicted membrane protein [Function unknown]	88.02
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	85.16

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.97  E-value=1.8e-28  Score=210.67  Aligned_cols=227  Identities=44%  Similarity=0.773  Sum_probs=201.2

Q ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh------hhhhHHHH
Q 026238           11 WRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------LRVAWYWY   84 (241)
Q Consensus        11 ~~~~~~~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~------~~~~~~~~   84 (241)
                      |+..+++++++++++||+++++.++++..++.+.+.+..-|..+++.-|..-.++..+...+|++.      .+++++++
T Consensus         3 ~~~~~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y   82 (334)
T PF06027_consen    3 KSFLFTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKY   82 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHH
Confidence            455688999999999999999999999999999988777799999999988888777766555432      46778999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCC--CCCCC
Q 026238           85 LLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG--GDGGG  162 (241)
Q Consensus        85 l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~--~~~~~  162 (241)
                      ++.+++.+.+|++...|++||+.+.++++.++.-+++++++++++|||.++.|++|++++++|+.++...|..  +.++.
T Consensus        83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~  162 (334)
T PF06027_consen   83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSS  162 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999877641  12223


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHhh
Q 026238          163 GSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVSNLL  237 (241)
Q Consensus       163 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l  237 (241)
                      +.++.+||++++.|++.||++++..|+..++.++.++.++.+++|.++..+...++|+.+.++.+|++..+..++
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v  237 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLV  237 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHH
Confidence            567789999999999999999999999999999999999999999999988888899998888899988766544

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.88  E-value=2.6e-20  Score=162.88  Aligned_cols=201  Identities=16%  Similarity=0.132  Sum_probs=153.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh--h-h---hhhHHHHHHHHHHHH
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--R-L---RVAWYWYLLLGFVDV   92 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~--~-~---~~~~~~~l~~~~~~~   92 (241)
                      ..+...--+.+-.++.+....+|...+ .+.+|....++|+.+++++++++...+++  + .   ++++.++.+.|+++.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~   89 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS   89 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence            344555555566678888989998885 46778999999999999999888764322  1 1   233566777788774


Q ss_pred             HHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHH------hcccchHHHHHHHHHHHHHhHhhcccCCCCC-------
Q 026238           93 QGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF------LGTRYSLWQLLGAALCVLGLGLVLLSDAGGD-------  159 (241)
Q Consensus        93 ~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~------l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~-------  159 (241)
                      ..+.+++.|++|+++++++++.++.|+++.++++++      +|||+++++++|++++++|+.++..+++...       
T Consensus        90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~  169 (358)
T PLN00411         90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP  169 (358)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence            337789999999999999999999999999999999      6999999999999999999998875431000       


Q ss_pred             ----------C-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCCh-HHHHHHHHHHHHHHHHHHHHHhhh
Q 026238          160 ----------G-GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDR-VEVVCMIGVYGLLVSAVQLSILEL  220 (241)
Q Consensus       160 ----------~-~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  220 (241)
                                . ..+.+...|+.+.+.|+++||.|+++.||..+++++ ...+++++.++.+...++....|+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~  242 (358)
T PLN00411        170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK  242 (358)
T ss_pred             cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence                      0 011122459999999999999999999999888765 456677777777666555555554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.87  E-value=1e-19  Score=155.61  Aligned_cols=185  Identities=15%  Similarity=0.114  Sum_probs=140.8

Q ss_pred             HHHHHHH-HHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh--hhhhHHHHHHHHHHHHHH-HHH
Q 026238           22 LLFLGQL-VSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR--LRVAWYWYLLLGFVDVQG-NFL   97 (241)
Q Consensus        22 g~~l~~~-~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~--~~~~~~~~l~~~~~~~~~-~~~   97 (241)
                      .+++..+ ..+.|+.+....|...  ++.+|...++.|+.++++++++++..++++  .+++++.....|.++... +.+
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~--~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   85 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGV--ESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGM   85 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444 5555666556666555  368999999999999999988877654432  344566667777776555 778


Q ss_pred             HHHHh-hccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHH
Q 026238           98 VNKAY-QFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAG  176 (241)
Q Consensus        98 ~~~al-~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a  176 (241)
                      ++.+. ++++++.++++.++.|+++++++.+ +|||+++++++|++++++|+.++..++.     .+ ....|++++++|
T Consensus        86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-----~~-~~~~G~l~~l~a  158 (292)
T PRK11272         86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-----LS-GNPWGAILILIA  158 (292)
T ss_pred             HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-----cc-cchHHHHHHHHH
Confidence            88888 9999999999999999999999986 6999999999999999999998864431     12 234799999999


Q ss_pred             HHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHH
Q 026238          177 TIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSI  217 (241)
Q Consensus       177 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  217 (241)
                      +++||.|.+..||..++ ++...+.++...+.+.+. +...
T Consensus       159 ~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~  197 (292)
T PRK11272        159 SASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLL-IASL  197 (292)
T ss_pred             HHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHH-HHHH
Confidence            99999999999997543 345566777777777664 4443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.87  E-value=1.9e-23  Score=168.56  Aligned_cols=218  Identities=44%  Similarity=0.828  Sum_probs=198.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Q 026238           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGN   95 (241)
Q Consensus        16 ~~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~   95 (241)
                      ++++++|+.+||++++|.++.++.++++++.+...|..++|..|.+-+++.-|...+|++..+.+|+.+++.++..+-+|
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaN   92 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEAN   92 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeeccc
Confidence            88999999999999999999999999999888888999999999999999999988888777888888999999999999


Q ss_pred             HHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCC-CCCCCcchhHHHHHH
Q 026238           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGD-GGGGSRPLLGDVLVI  174 (241)
Q Consensus        96 ~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~-~~~~~~~~~G~~l~l  174 (241)
                      ++...|+||++-..++++.+-....+.+++|+++|.|.++.++.|+.++++|+.++...|.... ...+.++.+||.+.+
T Consensus        93 y~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi  172 (336)
T KOG2766|consen   93 YFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI  172 (336)
T ss_pred             EEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence            9999999999999999999999999999999999999999999999999999999988775322 223567889999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHH
Q 026238          175 AGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIVS  234 (241)
Q Consensus       175 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  234 (241)
                      +++-+||+.++..+...++.|..+.+...+++|.++..|. .++|.......+|++....
T Consensus       173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~  231 (336)
T KOG2766|consen  173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFL  231 (336)
T ss_pred             ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHH
Confidence            9999999999999999999999999999999999999877 7888888888899865543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.86  E-value=4.7e-20  Score=157.93  Aligned_cols=174  Identities=18%  Similarity=0.170  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH-HHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNK  100 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~  100 (241)
                      +...+.+..++|+.+....|...  +..||...++.|+.++++++.++..  +++.+++.++..+.+.++... ..+++.
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~--~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~   80 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVS--ESLGPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLAL   80 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH--ccCChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHHH
Confidence            55666667777777766777655  4689999999999999988876542  222233333444555555555 666777


Q ss_pred             Hhhc----cchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCC-CCC---CCCCcchhHHHH
Q 026238          101 AYQF----SSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-GDG---GGGSRPLLGDVL  172 (241)
Q Consensus       101 al~~----~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~-~~~---~~~~~~~~G~~l  172 (241)
                      ++++    .++++++++.++.|+++.+++++++|||++++++.|++++++|+.++..++.. +..   +...+...|+.+
T Consensus        81 a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~  160 (295)
T PRK11689         81 SLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGL  160 (295)
T ss_pred             HHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHH
Confidence            7754    67888999999999999999999999999999999999999999998865420 000   011123469999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCChHHH
Q 026238          173 VIAGTIFFATSNVGEEFFVKKKDRVEV  199 (241)
Q Consensus       173 ~l~a~~~~a~~~v~~~~~~~~~~~~~~  199 (241)
                      +++|+++||.|+++.||..++.++...
T Consensus       161 ~l~aa~~~A~~~v~~k~~~~~~~~~~~  187 (295)
T PRK11689        161 AFIGAFIWAAYCNVTRKYARGKNGITL  187 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCchhH
Confidence            999999999999999998777777654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.86  E-value=1.3e-19  Score=152.11  Aligned_cols=176  Identities=19%  Similarity=0.086  Sum_probs=140.4

Q ss_pred             HHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchhhhhh
Q 026238           34 ALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKAYQFSSITSVTL  112 (241)
Q Consensus        34 ~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~al~~~~~~~a~~  112 (241)
                      +.+....|...+ +..||....+.|+..+.+++.+...++  +.++++++....|.++... +.+++.|++|++++++++
T Consensus         2 g~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~i   78 (260)
T TIGR00950         2 GTTGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAAL   78 (260)
T ss_pred             cchHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHH
Confidence            445556666443 468899999999999888887765544  3445566777888777777 888999999999999999


Q ss_pred             hhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 026238          113 LDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK  192 (241)
Q Consensus       113 l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~  192 (241)
                      +.++.|+++++++++++|||++++++.|+.++++|+.++..++.      ++....|+.+++.|+++|+.+.++.||..+
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~  152 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN------LSINPAGLLLGLGSGISFALGTVLYKRLVK  152 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc------ccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence            99999999999999999999999999999999999999875431      234468999999999999999999999877


Q ss_pred             cCCh--HHHHHHHHHHHHHHHHHHHHHhh
Q 026238          193 KKDR--VEVVCMIGVYGLLVSAVQLSILE  219 (241)
Q Consensus       193 ~~~~--~~~~~~~~~~~~~~~~i~~~~~~  219 (241)
                      +.|+  .....+.+..+.+... +....+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~-~~~~~~  180 (260)
T TIGR00950       153 KEGPELLQFTGWVLLLGALLLL-PFAWFL  180 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHH-HHHHhc
Confidence            7664  3455566777777775 554443

>TIGR00688 rarD rarD protein

Probab=99.84  E-value=1.1e-18  Score=146.39  Aligned_cols=158  Identities=18%  Similarity=0.100  Sum_probs=125.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhh--h----hh----hhh-HHHHHHHHH
Q 026238           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR--Q----RL----RVA-WYWYLLLGF   89 (241)
Q Consensus        21 ~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~--~----~~----~~~-~~~~l~~~~   89 (241)
                      +|+....+++++|+.++...|.+.   +.+|.++.++|+.++++++.+++..++  +    +.    +++ +......|.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~---~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLK---PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            388888999999999999999743   489999999999999988776653221  1    11    111 122444555


Q ss_pred             HHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhH
Q 026238           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLG  169 (241)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G  169 (241)
                      +....+.+++.|++++++++++++.++.|+++++++++++|||++++++++++++++|+.++..++.       +..   
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------~~~---  148 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-------SLP---  148 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------Cch---
Confidence            5444488999999999999999999999999999999999999999999999999999998865431       111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Q 026238          170 DVLVIAGTIFFATSNVGEEFFVK  192 (241)
Q Consensus       170 ~~l~l~a~~~~a~~~v~~~~~~~  192 (241)
                       .++++++++||.|.+..||..+
T Consensus       149 -~~~l~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       149 -WEALVLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             -HHHHHHHHHHHHHHHHHhhcCC
Confidence             4678999999999999999744

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.84  E-value=1.6e-18  Score=148.77  Aligned_cols=176  Identities=19%  Similarity=0.196  Sum_probs=130.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH-HHHHHHHh
Q 026238           24 FLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKAY  102 (241)
Q Consensus        24 ~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~al  102 (241)
                      ....+++++|+.+....|...  ++.+|..+.++|+.++++.+.++..+++    ++++.....|...... ..+++.++
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~--~~~~p~~~~~~R~~~a~~~l~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~   80 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGL--HNMPPLMLAGLRFMLVAFPAIFFVARPK----VPLNLLLGYGLTISFGQFAFLFCAI   80 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHhcCCC----CchHHHHHHHHHHHHHHHHHHHHHH
Confidence            345667788888888888766  3589999999999998776665543222    2233444555554445 55677899


Q ss_pred             hc-cchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 026238          103 QF-SSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFA  181 (241)
Q Consensus       103 ~~-~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a  181 (241)
                      ++ .++++++++.++.|+++.+++++++|||+++++++|++++++|+.++..++.    +.+.....|+.+++.++++||
T Consensus        81 ~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~----~~~~~~~~G~~l~l~aal~~a  156 (299)
T PRK11453         81 NFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL----NGQHVAMLGFMLTLAAAFSWA  156 (299)
T ss_pred             HhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC----CCcchhHHHHHHHHHHHHHHH
Confidence            88 5889999999999999999999999999999999999999999998885431    112223479999999999999


Q ss_pred             HHHHHHHHHhccCCh---HHHHHHHHHHHHH
Q 026238          182 TSNVGEEFFVKKKDR---VEVVCMIGVYGLL  209 (241)
Q Consensus       182 ~~~v~~~~~~~~~~~---~~~~~~~~~~~~~  209 (241)
                      .|+++.||..++.++   .....++...+.+
T Consensus       157 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (299)
T PRK11453        157 CGNIFNKKIMSHSTRPAVMSLVVWSALIPII  187 (299)
T ss_pred             HHHHHHHHHhcccCccchhHHHHHHHHHHHH
Confidence            999999998655433   2334444444433

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.84  E-value=1.5e-18  Score=148.65  Aligned_cols=162  Identities=18%  Similarity=0.090  Sum_probs=128.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh--hhh---hhHH--HHHHHHH
Q 026238           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--RLR---VAWY--WYLLLGF   89 (241)
Q Consensus        17 ~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~--~~~---~~~~--~~l~~~~   89 (241)
                      +++.+|.....+++++|+..+...|..   +..||..+.++|+.++.+++.+....+++  ..+   ++++  .....+.
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~---~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI---YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSA   80 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHH
Confidence            355679999999999999999888764   24889999999999998877766543221  111   1122  2234555


Q ss_pred             HHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchh
Q 026238           90 VDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLL  168 (241)
Q Consensus        90 ~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~  168 (241)
                      ++... +.+++.|++++++++++++.++.|+++++++++++|||++++++.|++++++|+.++..+++       ..   
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~---  150 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL---  150 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc---
Confidence            65665 88999999999999999999999999999999999999999999999999999999875431       11   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Q 026238          169 GDVLVIAGTIFFATSNVGEEFFVK  192 (241)
Q Consensus       169 G~~l~l~a~~~~a~~~v~~~~~~~  192 (241)
                       ..++++++++||.|.+..||..+
T Consensus       151 -~~~~l~aa~~~a~~~i~~r~~~~  173 (296)
T PRK15430        151 -PIIALGLAFSFAFYGLVRKKIAV  173 (296)
T ss_pred             -cHHHHHHHHHHHHHHHHHHhcCC
Confidence             15688899999999999999743

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.82  E-value=7.3e-18  Score=144.27  Aligned_cols=193  Identities=14%  Similarity=0.069  Sum_probs=146.7

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHH
Q 026238           13 SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR-LRVAWYWYLLLGFVD   91 (241)
Q Consensus        13 ~~~~~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~-~~~~~~~~l~~~~~~   91 (241)
                      ++++.++..|+.+..+...+++.++...|...+  ..||..+.++|+.++++++.++..+++++ .+++++..+..|.+.
T Consensus         4 ~~~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~   81 (293)
T PRK10532          4 SLRKLPVWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSL   81 (293)
T ss_pred             cccccccchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHH
Confidence            455667788999999999999999998888774  48899999999999999888776443322 345566677777765


Q ss_pred             HHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHH
Q 026238           92 VQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDV  171 (241)
Q Consensus        92 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~  171 (241)
                      ...+.+++.+++|+|++.++++.++.|+++.+++    +||+++.  .++.++++|+.++..++. +   .+.....|++
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~-~---~~~~~~~G~l  151 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQ-D---VSHVDLTGAA  151 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCC-C---cccCChHHHH
Confidence            4448888999999999999999999999998886    3666554  456778999988774432 1   1223347999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 026238          172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILE  219 (241)
Q Consensus       172 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  219 (241)
                      ++++|+++||.|.+..||..+++++... .++.+.+.+... +....+
T Consensus       152 l~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~  197 (293)
T PRK10532        152 LALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFV-PIGALQ  197 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHH-HHHHHc
Confidence            9999999999999999998777777665 455566665554 554443

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.81  E-value=4.8e-18  Score=145.93  Aligned_cols=171  Identities=14%  Similarity=0.125  Sum_probs=137.8

Q ss_pred             HHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH---Hhhhh-hhhhHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhh
Q 026238           38 FTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL---YRRQR-LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL  113 (241)
Q Consensus        38 ~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~---~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l  113 (241)
                      ..+|.+.+ +..+|..+++.|+..+.+...+...   +++++ .+++++..+..|++......+.+.|++|++++.++++
T Consensus        19 ~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li   97 (302)
T TIGR00817        19 IYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTI   97 (302)
T ss_pred             HHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence            34455443 3577999999999998776655421   11212 2456888888898875558889999999999999999


Q ss_pred             hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc-
Q 026238          114 DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK-  192 (241)
Q Consensus       114 ~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~-  192 (241)
                      .++.|+++++++++++|||++++++.|++++++|+.+....+       ......|++++++|+++||.|.++.||..+ 
T Consensus        98 ~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~  170 (302)
T TIGR00817        98 KAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGFLSAMISNITFVSRNIFSKKAMTI  170 (302)
T ss_pred             HhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999998754222       122347999999999999999999999877 


Q ss_pred             -cCChHHHHHHHHHHHHHHHHHHHHH
Q 026238          193 -KKDRVEVVCMIGVYGLLVSAVQLSI  217 (241)
Q Consensus       193 -~~~~~~~~~~~~~~~~~~~~i~~~~  217 (241)
                       +.|+.+.+.++...+.+.+. |...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~-p~~~  195 (302)
T TIGR00817       171 KSLDKTNLYAYISIMSLFLLS-PPAF  195 (302)
T ss_pred             CCCCcccHHHHHHHHHHHHHH-HHHH
Confidence             78899999999999888875 6544

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.78  E-value=9.8e-17  Score=140.48  Aligned_cols=170  Identities=15%  Similarity=0.150  Sum_probs=134.1

Q ss_pred             HHHHHHhhcCCCC-hHHHHHHHHHHHHHHHHHHHHH--hh-hhh---hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhh
Q 026238           38 FTSSLIADLGVDA-PVTQSAFAYFSLALVYGGVLLY--RR-QRL---RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSV  110 (241)
Q Consensus        38 ~~~~~l~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~--~~-~~~---~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a  110 (241)
                      ..+|.+.  +..| |..++.+|+.++.+++..+...  ++ ++.   +++++.++..|+++...+...+.|+++++++.+
T Consensus        66 ~~nK~vl--~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~  143 (350)
T PTZ00343         66 VDNKLAL--NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFT  143 (350)
T ss_pred             HHHHHHH--HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence            3444444  3477 9999999999997765544321  11 112   234778889999988876667799999999999


Q ss_pred             hhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 026238          111 TLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFF  190 (241)
Q Consensus       111 ~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~  190 (241)
                      +++.++.|+++++++++++|||++++++.+++++++|+.+....+.      + ....|++++++|+++||.++++.||.
T Consensus       144 ~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~------~-~~~~G~~~~l~s~~~~a~~~i~~k~~  216 (350)
T PTZ00343        144 HVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL------H-FTWLAFWCAMLSNLGSSLRSIFAKKT  216 (350)
T ss_pred             HHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc------h-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999875331      2 23579999999999999999999998


Q ss_pred             hccC-------ChHHHHHHHHHHHHHHHHHHHHH
Q 026238          191 VKKK-------DRVEVVCMIGVYGLLVSAVQLSI  217 (241)
Q Consensus       191 ~~~~-------~~~~~~~~~~~~~~~~~~i~~~~  217 (241)
                      .++.       ++.+...++...+.+++. |...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-p~~~  249 (350)
T PTZ00343        217 MKNKSEIGENLTASNIYMLLTLIASLISL-PLVL  249 (350)
T ss_pred             hcccccccccCCHHHHHHHHHHHHHHHHH-HHHH
Confidence            7653       355566666778887775 6654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.76  E-value=1.4e-16  Score=135.54  Aligned_cols=164  Identities=17%  Similarity=0.117  Sum_probs=125.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHh-----hhhhhhhHHHHHHHHHHHHHH-HH
Q 026238           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-----RQRLRVAWYWYLLLGFVDVQG-NF   96 (241)
Q Consensus        23 ~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~-~~   96 (241)
                      +.+.+.++++++.....+|...++  .++.  .+.++....+++.|+..++     +++.+++++.....+.++... +.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            567788899999999998866633  2332  4677777777777776543     122233344444555544444 88


Q ss_pred             HHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHH
Q 026238           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAG  176 (241)
Q Consensus        97 ~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a  176 (241)
                      +++.|+++.++++++.+.++.|+++.+++++++|||++++++.|+.+++.|+.++..++.      +.....|+.+++++
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~------~~~~~~g~~~~l~a  152 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF------AQHRRKAYAWALAA  152 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc------cccchhHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999998875442      11223688999999


Q ss_pred             HHHHHHHHHHHHHHhccCCh
Q 026238          177 TIFFATSNVGEEFFVKKKDR  196 (241)
Q Consensus       177 ~~~~a~~~v~~~~~~~~~~~  196 (241)
                      +++|+.|.+..|+..++.++
T Consensus       153 al~~a~~~i~~k~~~~~~~~  172 (281)
T TIGR03340       153 ALGTAIYSLSDKAAALGVPA  172 (281)
T ss_pred             HHHHHHhhhhccccccchhc
Confidence            99999999999886444443

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.69  E-value=1.2e-14  Score=122.92  Aligned_cols=181  Identities=24%  Similarity=0.307  Sum_probs=135.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhh---hhhhhhHHHHHHHHHHHHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR---QRLRVAWYWYLLLGFVDVQG   94 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~---~~~~~~~~~~l~~~~~~~~~   94 (241)
                      +...+.....+.++.+.......+...+. ..++....+.|...+.++..+...+++   .+.++++++..+.+.+....
T Consensus         4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (292)
T COG0697           4 ALLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLAL   82 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHH
Confidence            33445666666666677776666666543 466677777799988887444443332   11122234566666666666


Q ss_pred             -HHHHHHHhhccchhhhhhhhhchHHHHHHHHH-HHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCc-chhHHH
Q 026238           95 -NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTW-LFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSR-PLLGDV  171 (241)
Q Consensus        95 -~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~-~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~-~~~G~~  171 (241)
                       ..+++.++++++++.++.+.++.|+++.+++. +++|||++++++.+++++++|+.++..++..     +.+ ...|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~-----~~~~~~~g~~  157 (292)
T COG0697          83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG-----GGILSLLGLL  157 (292)
T ss_pred             HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc-----chhHHHHHHH
Confidence             88899999999999999999999999999997 6679999999999999999999999987631     111 568999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCChHHHHH-HHHH
Q 026238          172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVC-MIGV  205 (241)
Q Consensus       172 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~  205 (241)
                      +++.++++||.+.+..|+.. +.++..... ++..
T Consensus       158 ~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~  191 (292)
T COG0697         158 LALAAALLWALYTALVKRLS-RLGPVTLALLLQLL  191 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHH
Confidence            99999999999999999986 666655555 4444

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.64  E-value=4.7e-17  Score=132.58  Aligned_cols=197  Identities=19%  Similarity=0.332  Sum_probs=152.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhh---hhhHHHHHHHHHHHHHHH
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQGN   95 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~   95 (241)
                      -.+|+.+..+. ++.-.+.++++...   ..+|..+.-.|++.--++..|-..+++...   +.+.+++++.|+.|+.+.
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgv  111 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGV  111 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHH
Confidence            34788888777 55555556666555   356888888996665555555444443322   223556788899999999


Q ss_pred             HHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCC--CCCCC----CC-Ccchh
Q 026238           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA--GGDGG----GG-SRPLL  168 (241)
Q Consensus        96 ~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~--~~~~~----~~-~~~~~  168 (241)
                      ++.|+|++|.+.++|+++.+..|+++.++++.++|||.++.+.++..+.+.|++++..|..  ++.+.    .+ +..++
T Consensus       112 mlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~  191 (346)
T KOG4510|consen  112 MLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIP  191 (346)
T ss_pred             HHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCC
Confidence            9999999999999999999999999999999999999999999999999999999987754  11111    11 23457


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 026238          169 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILE  219 (241)
Q Consensus       169 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  219 (241)
                      |...++.+++.-|.-.++.|+..++.|....+.+...++.+...|......
T Consensus       192 gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig  242 (346)
T KOG4510|consen  192 GTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIG  242 (346)
T ss_pred             chHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcc
Confidence            899999999999999999999988899888888888888888876665554

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.52  E-value=1.4e-12  Score=111.40  Aligned_cols=175  Identities=14%  Similarity=0.075  Sum_probs=126.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhh--hh-HHHHHHHHHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLR--VA-WYWYLLLGFVDVQGNFLV   98 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~--~~-~~~~l~~~~~~~~~~~~~   98 (241)
                      ++.+..+.+++|+..+...|...   ..++.+..  |..++.+++.......+++.+  .+ +..-.+.|..-..++.++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~   76 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQ   76 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhH
Confidence            56778889999999999988765   35554443  777777766554433222111  11 222233333333448999


Q ss_pred             HHHhhccchhhhhhhhh-chHHHHHHHHHHHhcccchHHH----HHHHHHHHHHhHhhcccCCCCCCCCC-CcchhHHHH
Q 026238           99 NKAYQFSSITSVTLLDC-CTIAWAIVLTWLFLGTRYSLWQ----LLGAALCVLGLGLVLLSDAGGDGGGG-SRPLLGDVL  172 (241)
Q Consensus        99 ~~al~~~~~~~a~~l~~-~~Pv~~~l~~~~~l~ek~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~-~~~~~G~~l  172 (241)
                      +.|.++++++.+..+.+ +.|+++++.+.+++|||.++++    ..|++++++|++++...+..+.++.+ .+..+|..+
T Consensus        77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~  156 (290)
T TIGR00776        77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL  156 (290)
T ss_pred             HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence            99999999999998888 8999999999999999999999    99999999999988765421111011 233589999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCChHHHHHHH
Q 026238          173 VIAGTIFFATSNVGEEFFVKKKDRVEVVCMI  203 (241)
Q Consensus       173 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~  203 (241)
                      ++.|+++|+.|.+..|+.  +++|.+.++.+
T Consensus       157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~  185 (290)
T TIGR00776       157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQ  185 (290)
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCcceehhHH
Confidence            999999999999999986  47777774443

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.51  E-value=3.4e-12  Score=109.77  Aligned_cols=182  Identities=21%  Similarity=0.255  Sum_probs=144.7

Q ss_pred             HHHHHHHHhhcCCCC--hHHHHHHHHHHHHHHHHHHHHHhh--hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhhhh
Q 026238           36 MSFTSSLIADLGVDA--PVTQSAFAYFSLALVYGGVLLYRR--QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVT  111 (241)
Q Consensus        36 ~~~~~~~l~~~~~~~--p~~~~~~R~~~a~i~l~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~  111 (241)
                      .+.....+.+.+...  |..+++..+....+...+.....+  ++.+.+++.+...+++......+-+.|++|.|.+.-.
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~   94 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQI   94 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence            344555555444444  899999988888877766655333  3445668888899988888899999999999999999


Q ss_pred             hhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCC---CcchhHHHHHHHHHHHHHHHHHHHH
Q 026238          112 LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGG---SRPLLGDVLVIAGTIFFATSNVGEE  188 (241)
Q Consensus       112 ~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~---~~~~~G~~l~l~a~~~~a~~~v~~~  188 (241)
                      +..+..|+.+++++.+++|||.+++++.++++..+|+++....+..+....+   .+...|+.+.+.+.++.|...+++|
T Consensus        95 ~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe  174 (303)
T PF08449_consen   95 VFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQE  174 (303)
T ss_pred             HHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998766541111111   1123499999999999999999999


Q ss_pred             HHhcc--CChHHHHHHHHHHHHHHHHHHHHH
Q 026238          189 FFVKK--KDRVEVVCMIGVYGLLVSAVQLSI  217 (241)
Q Consensus       189 ~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~  217 (241)
                      |..++  .++.+.+++..+++.+...+....
T Consensus       175 ~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~  205 (303)
T PF08449_consen  175 KLFKKYGKSPWELMFYTNLFSLPFLLILLFL  205 (303)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            98765  567899999999999888755444

; GO: 0055085 transmembrane transport

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.50  E-value=1.1e-11  Score=103.01  Aligned_cols=184  Identities=17%  Similarity=0.096  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH--Hhhhhh---hhhHHHHHHHHH--HHH
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL--YRRQRL---RVAWYWYLLLGF--VDV   92 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~--~~~~~~---~~~~~~~l~~~~--~~~   92 (241)
                      -+|++++..+.+.|+......+.+.   ..|+.++...|.+-+.+++..+..  ++++..   .++.+.+....+  ...
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            4599999999999988888888877   578899999999988887766654  333322   222333333333  233


Q ss_pred             HHHHH-HHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHH
Q 026238           93 QGNFL-VNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDV  171 (241)
Q Consensus        93 ~~~~~-~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~  171 (241)
                      ..|+. |.+|.++..+-++++=++..|++..+++.+++|||+++.|++++.++.+||.......       +.-+    .
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~-------g~lp----w  151 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL-------GSLP----W  151 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-------CCCc----H
Confidence            33554 7789999999999999999999999999999999999999999999999999887655       2344    4


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 026238          172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILE  219 (241)
Q Consensus       172 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  219 (241)
                      .++.=+++|+.|...-|+.  +.|+.+..+..+..-++...+-....+
T Consensus       152 val~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~  197 (293)
T COG2962         152 VALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLA  197 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHh
Confidence            5666788999999887774  688888888888887777763333333

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.46  E-value=2.2e-12  Score=110.00  Aligned_cols=131  Identities=24%  Similarity=0.365  Sum_probs=107.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCC
Q 026238           82 YWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGG  161 (241)
Q Consensus        82 ~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~  161 (241)
                      +.-+..+.+-+.+++.+..|+++++++..+++.++.-+|+..++.++.+||.++.+.+++++.+.|++++..++..+.++
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~  239 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence            44566677778889999999999999999999999999999999999999999999999999999999998776421112


Q ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC----ChHHHHHHHHHHHHHHHH
Q 026238          162 -GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK----DRVEVVCMIGVYGLLVSA  212 (241)
Q Consensus       162 -~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~  212 (241)
                       ...++..|+++++++++.||+|.++.||...++    +-..+.++.+++..++..
T Consensus       240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllw  295 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLW  295 (416)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHh
Confidence             344668999999999999999999999986665    334455555666666664

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.46  E-value=2.4e-11  Score=98.76  Aligned_cols=178  Identities=15%  Similarity=0.065  Sum_probs=134.8

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 026238           29 VSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSI  107 (241)
Q Consensus        29 ~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~  107 (241)
                      .........-+.|.+.  +.++|..++..|..++++++..+.. ++++..++++......|..-...|.+||.+++..|-
T Consensus        20 amvsiq~Gas~Ak~LF--P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPl   97 (292)
T COG5006          20 AMVSIQSGASFAKSLF--PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPL   97 (292)
T ss_pred             HHHHHHhhHHHHHHHc--cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            3333333444566666  5688999999999999999987775 333444667888888887655559999999999999


Q ss_pred             hhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 026238          108 TSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGE  187 (241)
Q Consensus       108 ~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~  187 (241)
                      +.+..+.++.|+.+++++    .+|  .+....+.+++.|+.++.-.+.   + .+.....|..+++.++.||+.|.+..
T Consensus        98 GiAVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~---~-~~~lDp~Gv~~Al~AG~~Wa~YIv~G  167 (292)
T COG5006          98 GIAVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQ---S-VWSLDPVGVALALGAGACWALYIVLG  167 (292)
T ss_pred             hhhhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccC---C-cCcCCHHHHHHHHHHhHHHHHHHHHc
Confidence            999999999999988775    333  3455566678889888765442   1 12333489999999999999999999


Q ss_pred             HHHhccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 026238          188 EFFVKKKDRVEVVCMIGVYGLLVSAVQLSILE  219 (241)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  219 (241)
                      +|..+..|...-+...+.++.++.. |.-.-+
T Consensus       168 ~r~g~~~~g~~g~a~gm~vAaviv~-Pig~~~  198 (292)
T COG5006         168 QRAGRAEHGTAGVAVGMLVAALIVL-PIGAAQ  198 (292)
T ss_pred             chhcccCCCchHHHHHHHHHHHHHh-hhhhhh
Confidence            9997777777888888888888875 766543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.46  E-value=1.7e-12  Score=94.87  Aligned_cols=129  Identities=22%  Similarity=0.269  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhh------hhhHHHHHHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL------RVAWYWYLLLGFVDVQGN   95 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~------~~~~~~~l~~~~~~~~~~   95 (241)
                      -++.+.+.|++++....+.|.--  ++.+|...++.|.....+++..++...++..      ++.+..+.+.|+.+....
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl--~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGL--EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHH
Confidence            35677888888887777766644  4678899999999999888888887655422      233555555565444448


Q ss_pred             HHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhc
Q 026238           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (241)
Q Consensus        96 ~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~  152 (241)
                      .+||.|++..+++.++.+..++|+++.+++++++|||++..+|+|+.+..+|++++.
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            889999999999999999999999999999999999999999999999999998875

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.43  E-value=1.1e-12  Score=97.37  Aligned_cols=118  Identities=27%  Similarity=0.477  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHh-hh---hh-hhhHHHHHHHHHHHHHH-HHHHHHHhhcc
Q 026238           32 TLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-RQ---RL-RVAWYWYLLLGFVDVQG-NFLVNKAYQFS  105 (241)
Q Consensus        32 ~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~-~~---~~-~~~~~~~l~~~~~~~~~-~~~~~~al~~~  105 (241)
                      +|+......|...++  .||....++|+..+++ +.+..... ++   .. ++++......+.++... +.+++.+++++
T Consensus         2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            466677777877743  8899999999999987 44444322 21   11 23355666777775444 89999999999


Q ss_pred             chhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhc
Q 026238          106 SITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (241)
Q Consensus       106 ~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~  152 (241)
                      +++.++.+.++.|+++.+++++++||+++++++.|+.++++|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.35  E-value=1.1e-10  Score=97.11  Aligned_cols=162  Identities=20%  Similarity=0.201  Sum_probs=123.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCC
Q 026238           78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG  157 (241)
Q Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~  157 (241)
                      +++..++.+.+++....|.+.+.++++.+++.-.++..+..++|++++.+++|+|++++||.++.+.++|+.++..++..
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            34466788888887777999999999999999999999999999999999999999999999999999999998655431


Q ss_pred             C--C-C--C-----CCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC--ChHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 026238          158 G--D-G--G-----GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK--DRVEVVCMIGVYGLLVSAVQLSILELKSLES  225 (241)
Q Consensus       158 ~--~-~--~-----~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  225 (241)
                      +  . +  +     .+.+...|.++.++++++-|...++.+|..|+.  +....+....+.|.++..+.....+++...+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~  173 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE  173 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence            1  0 0  0     123456899999999999999999999998875  4455566667777777764433333332221


Q ss_pred             ----cccchhhHHHhhhc
Q 026238          226 ----VEWSTNIVSNLLLN  239 (241)
Q Consensus       226 ----~~~~~~~~~~~l~~  239 (241)
                          ..|++..+..++.|
T Consensus       174 ~g~f~G~~~~~~~~i~~~  191 (244)
T PF04142_consen  174 SGFFHGYSWWVWIVIFLQ  191 (244)
T ss_pred             CCchhhcchHHHHHHHHH
Confidence                24666666655543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.35  E-value=3.9e-11  Score=100.57  Aligned_cols=131  Identities=21%  Similarity=0.229  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhh---hhhHHHHHHHHHHHHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQG   94 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~---~~~~~~~l~~~~~~~~~   94 (241)
                      ...+|..++.+++++++......|+..++...++.....+++..+.+++.+.....++..   ++++...+..+.++...
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            346799999999999999999999887442323444555788888888888766443222   23355566677776655


Q ss_pred             -HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHh
Q 026238           95 -NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGL  148 (241)
Q Consensus        95 -~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv  148 (241)
                       +.+++.++++.+++.++.+.++.|+++++++++++|||++..++.|..+.+.|+
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence             888999999999999999999999999999999999999999999999999986

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.33  E-value=2.1e-11  Score=89.71  Aligned_cols=99  Identities=28%  Similarity=0.483  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhh------hhh-hhHHHHHHHHHHHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHH
Q 026238           56 AFAYFSLALVYGGVLLYRRQ------RLR-VAWYWYLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWL  127 (241)
Q Consensus        56 ~~R~~~a~i~l~~~~~~~~~------~~~-~~~~~~l~~~~~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~  127 (241)
                      .+|+..+.+++..+...+++      ..+ +++.+....|.++... +.+++.|+++.+ +.++.+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            47898888888777654322      112 2355566667777744 888999999999 58889999999999999999


Q ss_pred             HhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238          128 FLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus       128 ~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ++|||++++++.++.++++|++++..++
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~  108 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSD  108 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence            9999999999999999999999998776

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.25  E-value=1.7e-08  Score=86.34  Aligned_cols=212  Identities=15%  Similarity=0.119  Sum_probs=149.9

Q ss_pred             HHHHHHHHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHHHhh----hhh-----------hhhHHHHHHHHHHH
Q 026238           29 VSFTLALMSFTSSLIADLG--VDAPVTQSAFAYFSLALVYGGVLLYRR----QRL-----------RVAWYWYLLLGFVD   91 (241)
Q Consensus        29 ~a~~~~~~~~~~~~l~~~~--~~~p~~~~~~R~~~a~i~l~~~~~~~~----~~~-----------~~~~~~~l~~~~~~   91 (241)
                      .....++.....++..+.+  ...|...++.--++-.+++...+.++.    ++.           +++..+..+.+++.
T Consensus        23 ~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iY  102 (345)
T KOG2234|consen   23 LTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIY  102 (345)
T ss_pred             HHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHH
Confidence            4444555666666665443  344666676666666666666655442    111           11234555666665


Q ss_pred             HHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCC---CCC-CCCCCcch
Q 026238           92 VQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA---GGD-GGGGSRPL  167 (241)
Q Consensus        92 ~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~---~~~-~~~~~~~~  167 (241)
                      ..-|.+++.++.+.++++.++...+-.+.|+++..++++||++++||.+.++.++|+.++..+..   .+. ......+.
T Consensus       103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~  182 (345)
T KOG2234|consen  103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF  182 (345)
T ss_pred             HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence            55566999999999999999999999999999999999999999999999999999999973322   111 12345677


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHHHHHhhhcccc--c--cccchhhHHHhhhcC
Q 026238          168 LGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGLLVSAVQLSILELKSLE--S--VEWSTNIVSNLLLNN  240 (241)
Q Consensus       168 ~G~~l~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~--~~~~~~~~~~~l~~~  240 (241)
                      .|....+.+++.-+...++.+|..++  .+-...+-...++|.++..+....-+.....  .  ..|++..+..++.|.
T Consensus       183 ~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a  261 (345)
T KOG2234|consen  183 LGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNA  261 (345)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHh
Confidence            89999999999999999999999865  3445556666777877776444333333321  1  368888888888774

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.25  E-value=9.2e-10  Score=90.91  Aligned_cols=165  Identities=25%  Similarity=0.304  Sum_probs=132.7

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhhhh------------h---hhh--HHHHHHHHHHHHHHHHHHHHHhhccchhhh
Q 026238           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQR------------L---RVA--WYWYLLLGFVDVQGNFLVNKAYQFSSITSV  110 (241)
Q Consensus        48 ~~~p~~~~~~R~~~a~i~l~~~~~~~~~~------------~---~~~--~~~~l~~~~~~~~~~~~~~~al~~~~~~~a  110 (241)
                      .-+|+.++...|+.-..++..+...+.+.            .   +.+  ...++..+++...+..+++.++.+++++.-
T Consensus        36 fqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsf  115 (372)
T KOG3912|consen   36 FQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSF  115 (372)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHHH
Confidence            45689999777777767776665543321            0   111  234556789999999999999999999999


Q ss_pred             hhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCC---CCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 026238          111 TLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA---GGDGGGGSRPLLGDVLVIAGTIFFATSNVGE  187 (241)
Q Consensus       111 ~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~---~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~  187 (241)
                      .++.....+++.+++.-+++++++.+||+|+.....|++.+...|.   .++.++..+...|+++.+++-+.-|++.++.
T Consensus       116 QMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~E  195 (372)
T KOG3912|consen  116 QMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCE  195 (372)
T ss_pred             HHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998866533   1222333567799999999999999999999


Q ss_pred             HHHhcc--CChHHHHHHHHHHHHHHHH
Q 026238          188 EFFVKK--KDRVEVVCMIGVYGLLVSA  212 (241)
Q Consensus       188 ~~~~~~--~~~~~~~~~~~~~~~~~~~  212 (241)
                      +|..++  ++|.+.+++.+.+|.....
T Consensus       196 ek~l~~~nV~pl~avg~eGlfG~v~~s  222 (372)
T KOG3912|consen  196 EKQLKKSNVAPLQAVGWEGLFGLVILS  222 (372)
T ss_pred             HhhhhhccCCHHHHhhhhhhHHHHHHH
Confidence            998776  6799999999999965443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.16  E-value=3.2e-09  Score=90.91  Aligned_cols=133  Identities=17%  Similarity=0.018  Sum_probs=103.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh-h--hhhHHHHHHHHHHHHHH-H
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR-L--RVAWYWYLLLGFVDVQG-N   95 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~-~--~~~~~~~l~~~~~~~~~-~   95 (241)
                      ..|..++..++++++.....++...+  ..+|...... ..++++.+.++....... .  ...+...+..++++... +
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            45999999999999999999888763  3455555544 355556666655443221 1  11233345677777666 7


Q ss_pred             HHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        96 ~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      .+++.++++.+++.++.+.+++|+++.++++++++|+++..+++|..+.+.|++......
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            789999999999999999999999999999999999999999999999999999886554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.09  E-value=4.8e-09  Score=89.78  Aligned_cols=133  Identities=16%  Similarity=-0.018  Sum_probs=105.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh-----hhhhHHHHHHHHHHHHHH
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR-----LRVAWYWYLLLGFVDVQG   94 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~   94 (241)
                      ..|..++.+++++++......+...+.   ++.....+.+..+++++.++.......     ..+.+......++++...
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            468899999999999998888776532   234455677778877777665433211     123355667777776666


Q ss_pred             -HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           95 -NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        95 -~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                       +.+++.++++.++++++.+.++.|+++++++++++||+++..+++|.++.+.|+.+....+
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence             8899999999999999999999999999999999999999999999999999999886543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.99  E-value=2.3e-08  Score=87.82  Aligned_cols=137  Identities=15%  Similarity=0.100  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHH-hhhhh-------hhhHHHHHHHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY-RRQRL-------RVAWYWYLLLGF   89 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~-~~~~~-------~~~~~~~l~~~~   89 (241)
                      +...|..+....+++|+......+...+. ..++...+++....+.+.+.+.... .+...       .......+..++
T Consensus       186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i  264 (358)
T PLN00411        186 DWLIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAI  264 (358)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHH
Confidence            34568899999999999998888876532 3344455555555555444333322 21111       011122333343


Q ss_pred             HHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ....++.+.+.++++.+++.+++..++.|++++++++++++|++++.+++|.++.+.|+.+...++
T Consensus       265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            332237778889999999999999999999999999999999999999999999999999987543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.94  E-value=3.2e-08  Score=84.81  Aligned_cols=131  Identities=19%  Similarity=0.042  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh---h-hhhHHHHHHHHHHHHHHH
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR---L-RVAWYWYLLLGFVDVQGN   95 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~---~-~~~~~~~l~~~~~~~~~~   95 (241)
                      ..|..++..++++++......|...++  .+|....   +..+.+.+.+........   . .+.+...+..++....++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITLF---FILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhHH---HHHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHH
Confidence            358889999999999999999887632  3444432   222233333322222111   1 122444455554433338


Q ss_pred             HHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        96 ~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      .+++.++++.+++.++.+.+..|++..++++++++|+++..+++|.++.+.|+.+....+
T Consensus       230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            899999999999999999999999999999999999999999999999999998876544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.93  E-value=9e-08  Score=82.17  Aligned_cols=136  Identities=15%  Similarity=0.084  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHH-Hhhh--------hh-hhhHHHHHHHH
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLG-VDAPVTQSAFAYFSLALVYGGVLL-YRRQ--------RL-RVAWYWYLLLG   88 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~-~~~p~~~~~~R~~~a~i~l~~~~~-~~~~--------~~-~~~~~~~l~~~   88 (241)
                      ..|..++..++++++.....++...++. ..+......+-...+.+.+..... ....        .. ...+...+..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4699999999999999999999876432 222233333333443332222211 1111        11 12356667777


Q ss_pred             HHHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           89 FVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        89 ~~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +++... +.+++.++++.++++++.+.++.|++..++++++++|+++..+++|..+.++|+.+...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            777766 8889999999999999999999999999999999999999999999999999998876544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.89  E-value=3.5e-08  Score=83.93  Aligned_cols=130  Identities=19%  Similarity=0.187  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc-C-CCChHHHHHHHHHHHHHHHHHHHHH-hhhhh---hhhHHHHHHHHHHHHHH
Q 026238           21 YLLFLGQLVSFTLALMSFTSSLIADL-G-VDAPVTQSAFAYFSLALVYGGVLLY-RRQRL---RVAWYWYLLLGFVDVQG   94 (241)
Q Consensus        21 ~g~~l~~~~a~~~~~~~~~~~~l~~~-~-~~~p~~~~~~R~~~a~i~l~~~~~~-~~~~~---~~~~~~~l~~~~~~~~~   94 (241)
                      .|..++.+++++++......|...++ + ..+........+...++.+...... +++..   ..+.......+.+....
T Consensus       144 ~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       144 KAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGG  223 (281)
T ss_pred             hHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHH
Confidence            57777888888888777766654321 1 1111222222333321222222221 22111   12233334444444444


Q ss_pred             -HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHh
Q 026238           95 -NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGL  150 (241)
Q Consensus        95 -~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~l  150 (241)
                       +.+++.++++.+++.++.+.++.|++..+++++++||++++.+++|..+.++|+.+
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence             88999999999999999999999999999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.85  E-value=7.4e-08  Score=82.75  Aligned_cols=136  Identities=13%  Similarity=0.076  Sum_probs=101.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh-hh-hhh------------HHH-H
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ-RL-RVA------------WYW-Y   84 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~-~~-~~~------------~~~-~   84 (241)
                      ..|..++.+++++++.....++...+++..+|..+..+....+++.+.|+...... .. ..+            ... .
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            45888899899999988888887764335678888888888888888887653221 11 100            011 1


Q ss_pred             HHHHHHHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           85 LLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        85 l~~~~~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ...+...... +.+.+.+++++++..+++..+..|++++++++++++|+++..+++|.+++++|+.+....+
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            1112212222 4566689999999999999999999999999999999999999999999999999887544

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.78  E-value=1.6e-07  Score=80.50  Aligned_cols=70  Identities=11%  Similarity=0.153  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           86 LLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        86 ~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ..+......+.+++.++++.+++.++.+.+..|++..++++++++|+++..++.|..+.++|+.++..++
T Consensus       218 ~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        218 AAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444449999999999999999999999999999999999999999999999999999988876543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.78  E-value=4.3e-08  Score=84.00  Aligned_cols=173  Identities=17%  Similarity=0.227  Sum_probs=136.2

Q ss_pred             HHHhhc-CCCChHHHHHHHHHHHHHHHHHHHHHhh---hh--hhhhHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhh
Q 026238           41 SLIADL-GVDAPVTQSAFAYFSLALVYGGVLLYRR---QR--LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLD  114 (241)
Q Consensus        41 ~~l~~~-~~~~p~~~~~~R~~~a~i~l~~~~~~~~---~~--~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~  114 (241)
                      |.+.+. +..-|..++..++..+.+.....-..+-   ++  .+..++..+-.|++...+..+-+.|+++.+++...++-
T Consensus        37 K~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iK  116 (316)
T KOG1441|consen   37 KYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIK  116 (316)
T ss_pred             HhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHH
Confidence            444432 4555888888877776665544433221   11  12347778888888877799999999999999999999


Q ss_pred             hchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhc--
Q 026238          115 CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK--  192 (241)
Q Consensus       115 ~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~--  192 (241)
                      .+.|+++.++++++.+|+.+...+..++....|+.+....+       ..-.+.|...++++.+..+..+++.|+..+  
T Consensus       117 a~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~  189 (316)
T KOG1441|consen  117 ALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------LSFNLFGFISAMISNLAFALRNILSKKLLTSK  189 (316)
T ss_pred             hhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999999999999999999999999999999998877644       233468999999999999999999999873  


Q ss_pred             c--CChHHHHHHHHHHHHHHHHHHHHHhhh
Q 026238          193 K--KDRVEVVCMIGVYGLLVSAVQLSILEL  220 (241)
Q Consensus       193 ~--~~~~~~~~~~~~~~~~~~~i~~~~~~~  220 (241)
                      +  .|+.+...++.-++...+.+|....++
T Consensus       190 ~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~  219 (316)
T KOG1441|consen  190 GESLNSMNLLYYTAPISLIFLLIPFLDYVE  219 (316)
T ss_pred             ccccCchHHHHHhhhHHHHHHhcchHhhhc
Confidence            2  678888888888888888657765543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.78  E-value=6.1e-07  Score=69.07  Aligned_cols=130  Identities=15%  Similarity=0.140  Sum_probs=104.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHHHHh-hhh-------h-h-------hh
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADL-----GVDAPVTQSAFAYFSLALVYGGVLLYR-RQR-------L-R-------VA   80 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~-----~~~~p~~~~~~R~~~a~i~l~~~~~~~-~~~-------~-~-------~~   80 (241)
                      |.+++....++.+...+..+.+.+.     ...+|..+.......+.+++.|..... +..       . +       +.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5677888888888888888877655     577889999888888888888876532 211       0 1       11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhh
Q 026238           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (241)
Q Consensus        81 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li  151 (241)
                      ...++..|++++..+...+..++++++-..++......+.+.++++++++|+++..++.|+.++++|+.+-
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            34455556666666999999999999999999999999999999999999999999999999999998753

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.74  E-value=2.9e-07  Score=78.77  Aligned_cols=130  Identities=12%  Similarity=0.076  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHH---HH-HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFA---YF-SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG   94 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R---~~-~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~   94 (241)
                      ..+|+..+++++++++......+...    .+|....+..   .. .+.++..+. .+.++...+..+..++.|++-..+
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~ia  224 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGIG  224 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHH
Confidence            46799999999999999888888652    4556553333   33 333333322 111111122233344577775444


Q ss_pred             HHHHHHHhh-ccchhhhhhhhhchHHHHHHHHHHHhcccchHHHH----HHHHHHHHHhHhhcc
Q 026238           95 NFLVNKAYQ-FSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQL----LGAALCVLGLGLVLL  153 (241)
Q Consensus        95 ~~~~~~al~-~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~----~g~~l~~~Gv~li~~  153 (241)
                      +.+++.+.+ +.+++.+.++.+..|+...+.+.+++||+.+++++    +|.++.+.|+.++..
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            888989999 99999999999999999999999999999999999    999999999988753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.69  E-value=2.7e-07  Score=72.88  Aligned_cols=122  Identities=18%  Similarity=0.317  Sum_probs=100.1

Q ss_pred             HHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHH
Q 026238           91 DVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGD  170 (241)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~  170 (241)
                      ....++.|..|++..++++++.+....-.++.+++++.+|+|....++++..+++.|++++...|.     ...+.+.|.
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN-----~~a~e~iGi  137 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN-----EHADEIIGI  137 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-----hhhhhhhhH
Confidence            344499999999999999999999999999999999999999999999999999999999987763     245667999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCC---hHHHHHHHHHHHHHHHHHHHHH
Q 026238          171 VLVIAGTIFFATSNVGEEFFVKKKD---RVEVVCMIGVYGLLVSAVQLSI  217 (241)
Q Consensus       171 ~l~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~  217 (241)
                      .+++.|+..-|+|-+..|+...+.+   ...++.-.++.-..+...|..+
T Consensus       138 ~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lI  187 (290)
T KOG4314|consen  138 ACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALI  187 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHH
Confidence            9999999999999999999876533   4445554455555444444443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.68  E-value=1.5e-06  Score=73.32  Aligned_cols=133  Identities=29%  Similarity=0.283  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHH-HHHHHHHHHHHHHHHHhhh--hhhhhHHHHHHHHHHHHHH-
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSA-FAYFSLALVYGGVLLYRRQ--RLRVAWYWYLLLGFVDVQG-   94 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~-~R~~~a~i~l~~~~~~~~~--~~~~~~~~~l~~~~~~~~~-   94 (241)
                      ...|...+..++++++......+...   ..++..... ..+........+.......  .....+......++++... 
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence            46799999999999998888887666   234444444 3333222222222222221  2234466677777777754 


Q ss_pred             HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhccc
Q 026238           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (241)
Q Consensus        95 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~  154 (241)
                      +.+++.++++.+++.++.+.++.|++.+++++++++|+++.+++.|.++.+.|+.+....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            899999999999999999999999999999999999999999999999999999887654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.67  E-value=2e-07  Score=68.22  Aligned_cols=66  Identities=11%  Similarity=0.015  Sum_probs=59.3

Q ss_pred             HHHHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           88 GFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        88 ~~~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      +++++.. ..+...++++.|.+.+..+.++.|+++.+.+++++|||+++++++|+.++++|++++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3355555 88888999999999999999999999999999999999999999999999999988753

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.63  E-value=2.4e-06  Score=75.02  Aligned_cols=133  Identities=13%  Similarity=0.045  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCChHHHHHHHHHHHHHHHHHHHH-Hhhh---hhh--------h-hH
Q 026238           20 LYLLFLGQLVSFTLALMSFTSSLIADLG-----VDAPVTQSAFAYFSLALVYGGVLL-YRRQ---RLR--------V-AW   81 (241)
Q Consensus        20 ~~g~~l~~~~a~~~~~~~~~~~~l~~~~-----~~~p~~~~~~R~~~a~i~l~~~~~-~~~~---~~~--------~-~~   81 (241)
                      +.|.+.+.+.+++++..+..+|.+.++.     ..++..+...-...++++++|+.. ....   ...        . .+
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            5699999999999999999998876432     245555555556788888888765 2211   100        0 01


Q ss_pred             HHHHHHHHHH---HHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhc
Q 026238           82 YWYLLLGFVD---VQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (241)
Q Consensus        82 ~~~l~~~~~~---~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~  152 (241)
                      ...+...+..   ... +.+.+.+++++++.++++..+..|+++.++++++++|+++..+++|..++++|+.+..
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            1111111111   112 4445569999999999999999999999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.61  E-value=7.4e-06  Score=68.66  Aligned_cols=160  Identities=17%  Similarity=0.161  Sum_probs=113.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhh-hchHHHHHHHH
Q 026238           50 APVTQSAFAYFSLALVYGGVLLYRRQRLR---VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLD-CCTIAWAIVLT  125 (241)
Q Consensus        50 ~p~~~~~~R~~~a~i~l~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~-~~~Pv~~~l~~  125 (241)
                      +|..+.+.-..-+.++.+.....+++...   ..+..-++.|.+-..++...+.|+++.+++.+..+. ..+-+.+.+.+
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            46666644444444444444444444443   346666777777777799999999999999999775 66677799999


Q ss_pred             HHHhcccchHHHHH----HHHHHHHHhHhhcccCCCCCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCChHHHH
Q 026238          126 WLFLGTRYSLWQLL----GAALCVLGLGLVLLSDAGGDG-GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVV  200 (241)
Q Consensus       126 ~~~l~ek~~~~~~~----g~~l~~~Gv~li~~~~~~~~~-~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~  200 (241)
                      .++++|-.+..+++    ++++.++|+++....|..+.. +.+.+..+|....+++.+.|-.|.+..|..  +.++....
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~  168 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAF  168 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhH
Confidence            99999988876644    888899999998877642221 123445689999999999999999998873  56666665


Q ss_pred             HHHHHHHHHHHH
Q 026238          201 CMIGVYGLLVSA  212 (241)
Q Consensus       201 ~~~~~~~~~~~~  212 (241)
                      .-+ .+|.++..
T Consensus       169 lPq-aiGm~i~a  179 (269)
T PF06800_consen  169 LPQ-AIGMLIGA  179 (269)
T ss_pred             HHH-HHHHHHHH
Confidence            544 34444444

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.51  E-value=1.4e-05  Score=67.77  Aligned_cols=190  Identities=16%  Similarity=0.070  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-hHHHHHHHHHHHHHHHHHHHHHhh----hhh-hhhHHHHHHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDA-PVTQSAFAYFSLALVYGGVLLYRR----QRL-RVAWYWYLLLGFVDVQGN   95 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~-p~~~~~~R~~~a~i~l~~~~~~~~----~~~-~~~~~~~l~~~~~~~~~~   95 (241)
                      ++.-+..=++....+.+..|..-.....| -.......+....+.+. ++.+-+    +++ ++..++++-..++.+...
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~-~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i   91 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVL-VLKRLGLVNFRPLDLRTAKKWFPVSLLFVGML   91 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH-HHHHhceeecCCcChHHHHHHccHHHHHHHHH
Confidence            34444433334444455666554333333 33333355555444332 222211    222 344566666666555545


Q ss_pred             HHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHH
Q 026238           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIA  175 (241)
Q Consensus        96 ~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~  175 (241)
                      +.-..+++|.++...+++....|+.+++....++|.|+++..+.++....+|......++.      ..+ ..|+.+++.
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~------sf~-~~gY~w~~~  164 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL------SFN-LRGYSWALA  164 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc------eec-chhHHHHHH
Confidence            5566799999999999999999999999999999999999999999999999887776552      222 359999999


Q ss_pred             HHHHHHHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHHHHHhh
Q 026238          176 GTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGLLVSAVQLSILE  219 (241)
Q Consensus       176 a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~  219 (241)
                      ..+.-+.+.++.||..+.  .+....+++-.+...+...+...+.+
T Consensus       165 n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~g  210 (314)
T KOG1444|consen  165 NCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITG  210 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhc
Confidence            999999999999998654  34567788888888777764444443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.44  E-value=6.7e-06  Score=67.42  Aligned_cols=129  Identities=15%  Similarity=-0.023  Sum_probs=102.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhh--hhh-HHHHHHHHHHHHHH-HH
Q 026238           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL--RVA-WYWYLLLGFVDVQG-NF   96 (241)
Q Consensus        21 ~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~--~~~-~~~~l~~~~~~~~~-~~   96 (241)
                      .|..++...+.||++..+..+...+. ... ..-...-+..++++.+|+-..+..+-  ..+ ...-+..++++... +.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g-~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGRA-EHG-TAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhccc-CCC-chHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchH
Confidence            78999999999999998888887742 223 33344778999999999877554322  122 23344556677777 88


Q ss_pred             HHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhh
Q 026238           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (241)
Q Consensus        97 ~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li  151 (241)
                      +...++++.|....++++++.|.+.++.++++++|+++..||+++...+++..=.
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999888876643

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.31  E-value=0.00023  Score=60.05  Aligned_cols=165  Identities=18%  Similarity=0.272  Sum_probs=131.0

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHh--hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHH
Q 026238           48 VDAPVTQSAFAYFSLALVYGGVLLYR--RQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT  125 (241)
Q Consensus        48 ~~~p~~~~~~R~~~a~i~l~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~  125 (241)
                      .-+|..+++..-+.+.+.-...+...  +...+.+++.+...++.......+.+.|++|.+-.+-.+--+.--+-+++++
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            45677777777777666554333322  2233556888999999888889999999999999999888888889999999


Q ss_pred             HHHhcccchHHHHHHHHHHHHHhHhhcccCCCC-CCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc--CChHHHHH
Q 026238          126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG-DGG-GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVC  201 (241)
Q Consensus       126 ~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~-~~~-~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~  201 (241)
                      .+..|+|.+.++.+..++.-.|+.+-...+..+ ... ..++...|..+....-+.-+.-+..+++..++  .++..+++
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            999999999999999999999988776543212 111 22456689999999999999999999998776  57899999


Q ss_pred             HHHHHHHHHHH
Q 026238          202 MIGVYGLLVSA  212 (241)
Q Consensus       202 ~~~~~~~~~~~  212 (241)
                      +.++++.+...
T Consensus       208 ~vNLf~~i~~~  218 (327)
T KOG1581|consen  208 GVNLFSAILNG  218 (327)
T ss_pred             HHHHHHHHHHH
Confidence            99999998886

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.28  E-value=5.7e-06  Score=62.09  Aligned_cols=72  Identities=24%  Similarity=0.285  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHH--HhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           84 YLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWL--FLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        84 ~l~~~~~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~--~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +++.|+..... ..+...++++.|++.+..+.+..++.+.+.++.  ++||+++.++++|+++.++|++++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            45667766766 888999999999999999999999888888885  8999999999999999999999987544

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.21  E-value=8.6e-05  Score=62.61  Aligned_cols=166  Identities=12%  Similarity=0.127  Sum_probs=112.7

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHH-Hhhhhhh-h---hH----HHHHHHHHHHHHH-HHHHHHHhhccchhhhhhhhhch
Q 026238           48 VDAPVTQSAFAYFSLALVYGGVLL-YRRQRLR-V---AW----YWYLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCT  117 (241)
Q Consensus        48 ~~~p~~~~~~R~~~a~i~l~~~~~-~~~~~~~-~---~~----~~~l~~~~~~~~~-~~~~~~al~~~~~~~a~~l~~~~  117 (241)
                      ..=|..++...++.-..+...... ++++..+ +   .|    ++....+++ ... -.+-+++++|++.+.-++.-+..
T Consensus        42 f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSs  120 (349)
T KOG1443|consen   42 FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSS  120 (349)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccH
Confidence            333788777777665554443332 2222111 1   13    333233332 333 55678899999999999999999


Q ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc----
Q 026238          118 IAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK----  193 (241)
Q Consensus       118 Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~----  193 (241)
                      ++++.+++.+|.-||+++.-..-+.++.+|+.+.+..+.       +-...|..+.++|.++-++--.+.++..++    
T Consensus       121 i~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~  193 (349)
T KOG1443|consen  121 ILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSA  193 (349)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccc
Confidence            999999999999999999999999999999999887662       233579999888888877777777766554    


Q ss_pred             -CChHHHHHHHHHHHHHHHHHHHHHhhhc
Q 026238          194 -KDRVEVVCMIGVYGLLVSAVQLSILELK  221 (241)
Q Consensus       194 -~~~~~~~~~~~~~~~~~~~i~~~~~~~~  221 (241)
                       .||...+....-...+.+......+|+.
T Consensus       194 ~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~  222 (349)
T KOG1443|consen  194 KRNPIDTIFHLQPWMSIGLLPLSLLFEGL  222 (349)
T ss_pred             cCCCeeeHHHhhhHHHHHHHHHHHHHccc
Confidence             4566666655544444443234456654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.07  E-value=0.00024  Score=61.09  Aligned_cols=134  Identities=15%  Similarity=0.108  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHH--hhhhh---------hhhHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY--RRQRL---------RVAWYWYLLLGFV   90 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~--~~~~~---------~~~~~~~l~~~~~   90 (241)
                      |+++..+..++-+..+...+.+.++...++....++-..++.++..+....  .....         +......+..+++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            999999888888888888888876667788899888888888877766654  22110         1124566777778


Q ss_pred             HHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           91 DVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +..++.+.+.-.+..++-..+++..+.-+.+.+++.+++++++++.+|.|+.+.+.|..+-...+
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            88887777778899999999999999999999999999999999999999999999998876544

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.07  E-value=5.4e-05  Score=65.03  Aligned_cols=122  Identities=19%  Similarity=0.180  Sum_probs=86.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH-
Q 026238           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-   94 (241)
Q Consensus        16 ~~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~-   94 (241)
                      ++++..|+.++++.+++.+......|+-..+.....     .|--          ...++..+++.|   +.|+..... 
T Consensus         2 ~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~-----~~~~----------~~~~~~l~~~~W---~~G~~~~~~g   63 (300)
T PF05653_consen    2 NTDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGS-----LRAG----------SGGRSYLRRPLW---WIGLLLMVLG   63 (300)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cccc----------chhhHHHhhHHH---HHHHHHHhcc
Confidence            457788999999999998888777766542211100     0000          000111222222   344443334 


Q ss_pred             HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        95 ~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ..+.+.|+.+.|++..+.+....-++..+++..++|||++++.+.|+.++++|..++...+
T Consensus        64 ~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   64 EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            7788899999999999999999999999999999999999999999999999998776443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.05  E-value=4.1e-05  Score=62.30  Aligned_cols=131  Identities=15%  Similarity=0.179  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCC
Q 026238           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDG  160 (241)
Q Consensus        81 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~  160 (241)
                      -+.+...+.-...+...-+.|+||.|-.+..+=-+.-|+-+++++..+.+++.+|++..+++++++|+++-...+. +.+
T Consensus        85 ~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~-Kv~  163 (337)
T KOG1580|consen   85 TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN-KVG  163 (337)
T ss_pred             chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc-ccC
Confidence            4455555544344477888999999999999999999999999999999999999999999999999999988753 222


Q ss_pred             C-CCCcchhHHHHHHHHHHHHHHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHH
Q 026238          161 G-GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGLLVSA  212 (241)
Q Consensus       161 ~-~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~  212 (241)
                      + .+.....|.++.+.|--.-+.....+++....  .+...++.+.++++.+.+.
T Consensus       164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg  218 (337)
T KOG1580|consen  164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLG  218 (337)
T ss_pred             CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhh
Confidence            2 23455689999999999999998888887444  3457788888999888875

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.03  E-value=0.00097  Score=58.12  Aligned_cols=165  Identities=10%  Similarity=-0.041  Sum_probs=109.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH----H-h-----hhhhhhhHHHHHH
Q 026238           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL----Y-R-----RQRLRVAWYWYLL   86 (241)
Q Consensus        17 ~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~----~-~-----~~~~~~~~~~~l~   86 (241)
                      ++...|++.-.+.++|+++.....|+ .+......+..+ .- ++..+ +.|+..    . .     ++.....+..-++
T Consensus         3 ~~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~v-~g-i~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          3 NAIILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWSV-GG-IFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             chhHHHHHHHHHHHHHhhcccccccc-cCCCchhHHHHH-HH-HHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            35667999999999999999888877 432222222221 11 12111 122111    0 0     1111222444556


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccc-------hHHHHHHHHHHHHHhHhhcc----c
Q 026238           87 LGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRY-------SLWQLLGAALCVLGLGLVLL----S  154 (241)
Q Consensus        87 ~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~-------~~~~~~g~~l~~~Gv~li~~----~  154 (241)
                      .|.+-..++..+..++++.+.+.+..+ ..++-+...++..++++|=.       ...-..|+++.++|+++...    .
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k  158 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLK  158 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence            666666669999999999999999855 78888999999999998654       23468899999999999987    4


Q ss_pred             CCCCCC--CCCCcchhHHHHHHHHHHHHHHHHH
Q 026238          155 DAGGDG--GGGSRPLLGDVLVIAGTIFFATSNV  185 (241)
Q Consensus       155 ~~~~~~--~~~~~~~~G~~l~l~a~~~~a~~~v  185 (241)
                      +..+.+  +.+.+..+|...+++|++.++.|+.
T Consensus       159 ~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        159 ERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             ccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence            321111  1234556899999999999999993

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.97  E-value=3.5e-05  Score=63.99  Aligned_cols=168  Identities=17%  Similarity=0.178  Sum_probs=118.3

Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhhh--------hhhhh---HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhc
Q 026238           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQ--------RLRVA---WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCC  116 (241)
Q Consensus        48 ~~~p~~~~~~R~~~a~i~l~~~~~~~~~--------~~~~~---~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~  116 (241)
                      -..|..+++...+....+...+-....+        +.+.+   .++.+-..+.-...-.+-+.+++|.+++.-.+=.++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            3458888888887776655544321111        11111   233333343323223445578899999998899999


Q ss_pred             hHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccCC-
Q 026238          117 TIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD-  195 (241)
Q Consensus       117 ~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-  195 (241)
                      ..+|+.++..+++|||-+..-..+..+++.|-.+=...++    ..+...+.|.++++.|.++-|+..++.||.....+ 
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~----~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~  213 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG----STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD  213 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheecccccc----ccCccchhhhHHHHHHHHHHHHHHHhhheecccccC
Confidence            9999999999999999999998888888888665332221    12345668999999999999999999998755533 


Q ss_pred             -hHHHHHHHHHHHHHHHHHHHHHhhh
Q 026238          196 -RVEVVCMIGVYGLLVSAVQLSILEL  220 (241)
Q Consensus       196 -~~~~~~~~~~~~~~~~~i~~~~~~~  220 (241)
                       -.....+....+.++.. |..++.+
T Consensus       214 ~iw~lt~ynnv~a~lLfl-pll~lng  238 (347)
T KOG1442|consen  214 CIWRLTAYNNVNALLLFL-PLLILNG  238 (347)
T ss_pred             eehhhHHHHHHHHHHHHH-HHHHHcc
Confidence             46788888888888885 8877644

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.90  E-value=0.00047  Score=55.84  Aligned_cols=145  Identities=16%  Similarity=0.068  Sum_probs=109.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCC
Q 026238           80 AWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGD  159 (241)
Q Consensus        80 ~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~  159 (241)
                      +.+++...+++-...-+.--.+++|.++..-++.-++..+.++.....++|.|.+-.+..+..+.+..-+.-...|....
T Consensus        67 ~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~  146 (309)
T COG5070          67 KAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS  146 (309)
T ss_pred             hhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH
Confidence            34444455554444344445699999999999999999999999999999999999999999988888777666553111


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccC--ChHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 026238          160 GGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK--DRVEVVCMIGVYGLLVSAVQLSILELKSLE  224 (241)
Q Consensus       160 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  224 (241)
                      .......+.|++|....++.-|.+....||..+-.  .-.+-++|..+.+.+++.....++|+.+..
T Consensus       147 ~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~  213 (309)
T COG5070         147 AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG  213 (309)
T ss_pred             HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc
Confidence            11223456899999999999999999999986543  346778899999998887555666655443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.87  E-value=0.0003  Score=51.25  Aligned_cols=68  Identities=18%  Similarity=0.274  Sum_probs=58.5

Q ss_pred             HHHHHHHH-HHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhccc
Q 026238           87 LGFVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (241)
Q Consensus        87 ~~~~~~~~-~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~  154 (241)
                      ..+.++.. ..++..++++.|.+.+-.+ ....-+.+.+.+++++||++++.+++|+.+.++|++.+-..
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44555555 7778899999999999866 66888999999999999999999999999999999998543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.85  E-value=0.00021  Score=60.01  Aligned_cols=127  Identities=10%  Similarity=0.054  Sum_probs=87.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHH---HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH
Q 026238           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSA---FAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQ   93 (241)
Q Consensus        17 ~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~---~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~   93 (241)
                      ++..+|+....+..+.++......+...    .+|....+   .-++++++++..+.  +++..+++.++-++.|++...
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~~----~~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k~~~~nil~G~~w~i  207 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAFH----VSGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEKKSWKNILTGLIWGI  207 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhcC----CChhHhHHHHHHHHHHHHHHHhhcc--cccccccchHHhhHHHHHHHH
Confidence            4567899998889888888877766533    44444432   22233333222111  222222334455678888777


Q ss_pred             HHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHH----HHHHHHHHhH
Q 026238           94 GNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLL----GAALCVLGLG  149 (241)
Q Consensus        94 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~----g~~l~~~Gv~  149 (241)
                      ++.+++.|.+....+.+-.+..+.++.+.+.+.+++||+=+++++.    |.++.++|.+
T Consensus       208 gnl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  208 GNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            7999999999999999999999999999999999999999988764    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.80  E-value=0.00099  Score=48.39  Aligned_cols=63  Identities=17%  Similarity=0.275  Sum_probs=54.8

Q ss_pred             HHHHHH-HHHHHHHhhccchhhhh-hhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhh
Q 026238           89 FVDVQG-NFLVNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (241)
Q Consensus        89 ~~~~~~-~~~~~~al~~~~~~~a~-~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li  151 (241)
                      ..++.. .+++..++|+.|.+.+- +.....-+.+.+.+.+++||++++.++.|+.+.++|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344444 77888999999999998 4567888899999999999999999999999999999876

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.77  E-value=0.0014  Score=49.84  Aligned_cols=127  Identities=18%  Similarity=0.195  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh-hh---hhhHHHHHHHHHHHHHHHHHH
Q 026238           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ-RL---RVAWYWYLLLGFVDVQGNFLV   98 (241)
Q Consensus        23 ~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~~   98 (241)
                      ++++.+...+.+.....+..+.+. ..+|..-++.-+..+.+.+..+....++ ..   ++..++....|.++...-.+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~   81 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHH
Confidence            456666777777777777777754 2258999999999998888777654433 21   222445556888888887778


Q ss_pred             HHHhhccchhhhhhh-hhchHHHHHHHHHH----HhcccchHHHHHHHHHHHHHhHh
Q 026238           99 NKAYQFSSITSVTLL-DCCTIAWAIVLTWL----FLGTRYSLWQLLGAALCVLGLGL  150 (241)
Q Consensus        99 ~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~----~l~ek~~~~~~~g~~l~~~Gv~l  150 (241)
                      ..+....+++.+..+ ..-+-+..+++.++    .-|+++++++.+|+.+.++|+.+
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            888899999888854 55666667778876    45799999999999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.76  E-value=0.00069  Score=48.61  Aligned_cols=68  Identities=24%  Similarity=0.246  Sum_probs=58.2

Q ss_pred             HHHHHHHHH-HHHHHHHhhccchhhhh-hhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           86 LLGFVDVQG-NFLVNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        86 ~~~~~~~~~-~~~~~~al~~~~~~~a~-~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      +....++.. +.++..|+|+.|.+.|- +.....-+.+.+.+++++||+.+..+++|+.+.++|++.+-.
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            333444555 88888999999999998 558888999999999999999999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.70  E-value=0.00086  Score=49.58  Aligned_cols=69  Identities=17%  Similarity=0.197  Sum_probs=58.9

Q ss_pred             HHHHHHHH-HHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           87 LGFVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        87 ~~~~~~~~-~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ..+..+.. .+++..++++.|.+.+-.+ ....-+.+.+.+.+++||++++.+++|+.+.++|++.+-..+
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            34444544 8888899999999999866 578999999999999999999999999999999999885443

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.70  E-value=0.001  Score=48.01  Aligned_cols=64  Identities=19%  Similarity=0.064  Sum_probs=55.9

Q ss_pred             HHHHHH-HHHHHHHhhccchhhhh-hhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhc
Q 026238           89 FVDVQG-NFLVNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (241)
Q Consensus        89 ~~~~~~-~~~~~~al~~~~~~~a~-~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~  152 (241)
                      ..++.. .+++..++++.|.+.+- +.....-+.+.+.+.+++||++++.++.|+.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            444455 88888999999999998 45678889999999999999999999999999999999874

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=97.69  E-value=0.00015  Score=60.38  Aligned_cols=183  Identities=16%  Similarity=0.129  Sum_probs=124.3

Q ss_pred             HHHHHHHHHHH-HHHhhcCCCChHHHHHHHHHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-c
Q 026238           30 SFTLALMSFTS-SLIADLGVDAPVTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFS-S  106 (241)
Q Consensus        30 a~~~~~~~~~~-~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~-~  106 (241)
                      .+.=|++++.. ..+.+.+..+-..+++..+++-+.--+++.- ....+++.+.+.+...-...+..+.+-+.|+++- +
T Consensus        11 vf~GCcsnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~   90 (330)
T KOG1583|consen   11 VFGGCCSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIP   90 (330)
T ss_pred             HHHhhhchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeeccc
Confidence            33344455443 3444433333377787777766554443332 1122345556666665555455588889999984 5


Q ss_pred             hhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCC--------CC----CCCcchhHHHHHH
Q 026238          107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGD--------GG----GGSRPLLGDVLVI  174 (241)
Q Consensus       107 ~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~--------~~----~~~~~~~G~~l~l  174 (241)
                      ...-.++.+-.++.++.+++++.|+|.+.+|..++++.-+|+++....+..|.        .+    .......|..+..
T Consensus        91 ~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~  170 (330)
T KOG1583|consen   91 MPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLV  170 (330)
T ss_pred             ceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHH
Confidence            55666789999999999999999999999999999999999988865432110        01    1112346888888


Q ss_pred             HHHHHHHHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHH
Q 026238          175 AGTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGLLVSA  212 (241)
Q Consensus       175 ~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~  212 (241)
                      .|-+.-|.-.++++...++  .|+-+.++|.-+...+..+
T Consensus       171 ~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl  210 (330)
T KOG1583|consen  171 FALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL  210 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH
Confidence            8888888888888877666  5789999999877765554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.66  E-value=0.0019  Score=56.18  Aligned_cols=137  Identities=16%  Similarity=0.113  Sum_probs=93.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH-Hhhhhhh---hh---HHHHHHHHH
Q 026238           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL-YRRQRLR---VA---WYWYLLLGF   89 (241)
Q Consensus        17 ~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~-~~~~~~~---~~---~~~~l~~~~   89 (241)
                      .+..+|=++.+..+.+++.+++..+++.++  .|+......--+++.++..+.+. .++...+   .+   ...+...++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence            356789999999999999999998887743  34455443334555555544443 3332221   11   111111222


Q ss_pred             HHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +.+..+.+.-..++++++....+=.-+..+++++++.+++|+++++...+|.++.++|.++....+
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            222224445567888888877777788999999999999999999999999999999999886544

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.60  E-value=0.0003  Score=58.54  Aligned_cols=197  Identities=17%  Similarity=0.218  Sum_probs=132.5

Q ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCCCCh--HHHHHHHHHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHHHH
Q 026238           18 RTLYLLFLGQLVSF-TLALMSFTSSLIADLGVDAP--VTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQ   93 (241)
Q Consensus        18 ~~~~g~~l~~~~a~-~~~~~~~~~~~l~~~~~~~p--~~~~~~R~~~a~i~l~~~~~-~~~~~~~~~~~~~l~~~~~~~~   93 (241)
                      .+|...++-....+ .+-..+....+..+.....|  +.+++..+..-..+.+.-+. .+.++...+|+.+..++.+-..
T Consensus        39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~g  118 (367)
T KOG1582|consen   39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVG  118 (367)
T ss_pred             chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhh
Confidence            34444444333222 23334445555555545554  34455555443332222221 2223334568888888876555


Q ss_pred             HHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCCCCCCCCCCcchhHHHHH
Q 026238           94 GNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLV  173 (241)
Q Consensus        94 ~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~G~~l~  173 (241)
                      ..-+-..++.|.+-..-.+.-++--+-+++.+.++-++|..+....+..+..+|.++-...|.  .. ..+-...|+.+.
T Consensus       119 tmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs--~~-sPNF~~~Gv~mI  195 (367)
T KOG1582|consen  119 TMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS--QT-SPNFNLIGVMMI  195 (367)
T ss_pred             ccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc--cc-CCCcceeeHHHH
Confidence            566677788888888888888888888999999999999999999999999999999887773  11 223345899999


Q ss_pred             HHHHHHHHHHHHHHHHHhcc--CChHHHHHHHHHHHHHHHHHHHHH
Q 026238          174 IAGTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGLLVSAVQLSI  217 (241)
Q Consensus       174 l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~  217 (241)
                      -.|-++-|+-.-+++|..+.  .+..+++++...+|.+....|...
T Consensus       196 sgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvl  241 (367)
T KOG1582|consen  196 SGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVL  241 (367)
T ss_pred             HHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHh
Confidence            99999999887777777665  456788999988898888755443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.39  E-value=8.5e-05  Score=61.57  Aligned_cols=130  Identities=15%  Similarity=0.160  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH----HhhhhhhhhHHHHHHHHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL----YRRQRLRVAWYWYLLLGFVDVQGNFL   97 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~   97 (241)
                      |..-++..+.+.++...+-+++.+.  .+......+--.++.+..+..+.    .+.+.-+++++.+..+|+.|+.++.+
T Consensus       192 gt~aai~s~lf~asvyIilR~iGk~--~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgfigQIl  269 (346)
T KOG4510|consen  192 GTVAAISSVLFGASVYIILRYIGKN--AHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGFIGQIL  269 (346)
T ss_pred             chHHHHHhHhhhhhHHHHHHHhhcc--ccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhhHHHHH
Confidence            3445555555566666677777643  22222221222222222222221    23333456677778889999999999


Q ss_pred             HHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           98 VNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        98 ~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      ...++|.-.++..+++.++..++..+.-.+++|+-|+++.|.|+++.+...+....
T Consensus       270 lTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  270 LTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            99999999999999999999999999999999999999999999988777666653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.26  E-value=3.5e-05  Score=63.03  Aligned_cols=165  Identities=15%  Similarity=0.110  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL-RVAWYWYLLLGFVDVQGNFLVNK  100 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~  100 (241)
                      .++++.+=++.|+....+..+..    -+|..+......-+.++.+.+++...+.. .+.+..-++.|.+-..++...+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfk   78 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFK   78 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhh
Confidence            46677777788887776654443    35777774544444444444443322222 22244444556666666899999


Q ss_pred             Hhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHH----HHHHHHHHHHhHhhcccCCCCCCCCC-CcchhHHHHHH
Q 026238          101 AYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQ----LLGAALCVLGLGLVLLSDAGGDGGGG-SRPLLGDVLVI  174 (241)
Q Consensus       101 al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~-~~~~~G~~l~l  174 (241)
                      |.++.+++.+..+ ..++-+-+.+++.+.++|-.+..+    ..++++.++|+.+-...+.++.+.++ .+.-+|....+
T Consensus        79 a~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~  158 (288)
T COG4975          79 AIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILL  158 (288)
T ss_pred             heeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeee
Confidence            9999999999976 567777799999999999988876    45777888888888777642222222 23457999889


Q ss_pred             HHHHHHHHHHHHHHHH
Q 026238          175 AGTIFFATSNVGEEFF  190 (241)
Q Consensus       175 ~a~~~~a~~~v~~~~~  190 (241)
                      .|.+.|-.|.+..+-.
T Consensus       159 iSt~GYv~yvvl~~~f  174 (288)
T COG4975         159 ISTLGYVGYVVLFQLF  174 (288)
T ss_pred             eeccceeeeEeeeccc
Confidence            9999999998888775

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.15  E-value=0.0053  Score=43.31  Aligned_cols=57  Identities=18%  Similarity=0.176  Sum_probs=33.1

Q ss_pred             HHHHHHH-HHHHHHHhhccchhhhhh-hhhchHHHHHHHHHHHhcccchHHHHHHHHHH
Q 026238           88 GFVDVQG-NFLVNKAYQFSSITSVTL-LDCCTIAWAIVLTWLFLGTRYSLWQLLGAALC  144 (241)
Q Consensus        88 ~~~~~~~-~~~~~~al~~~~~~~a~~-l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~  144 (241)
                      .+..+.. ..++..++++.|.+.+-. ......+.+.+.+.+++||+++..++.|+.+.
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3334444 778889999999999975 46799999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR00688 rarD rarD protein

Probab=97.10  E-value=0.0098  Score=49.69  Aligned_cols=49  Identities=12%  Similarity=0.143  Sum_probs=41.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHH
Q 026238           80 AWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF  128 (241)
Q Consensus        80 ~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~  128 (241)
                      +|......|++...++.+++.++++.|++.++...|+.|+++.+++.+.
T Consensus       207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            5666667777655459999999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00803 nst UDP-galactose transporter

Probab=97.08  E-value=0.0071  Score=49.51  Aligned_cols=65  Identities=18%  Similarity=0.316  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHh
Q 026238           86 LLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGL  150 (241)
Q Consensus        86 ~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~l  150 (241)
                      ...+.......+....++|.++..-++...+.++.+.+++.++++|+++..++.|..+.+.|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            33344444477788899999999999999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.91  E-value=0.0029  Score=46.14  Aligned_cols=68  Identities=18%  Similarity=0.298  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhh
Q 026238           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (241)
Q Consensus        84 ~l~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li  151 (241)
                      +.+.=.+...++..|+..+...|.+.+..+ +++.=++|++.++++.+|..+++.++|+.+.+.|+.+.
T Consensus        44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            433333455558999999999999999977 68888999999998888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.69  E-value=0.0067  Score=52.32  Aligned_cols=137  Identities=16%  Similarity=0.145  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCChHHHHHHHHHHHHHHHH-HHHHHhhhhh---------hhhHHHHHH
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIAD--LGVDAPVTQSAFAYFSLALVYG-GVLLYRRQRL---------RVAWYWYLL   86 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~--~~~~~p~~~~~~R~~~a~i~l~-~~~~~~~~~~---------~~~~~~~l~   86 (241)
                      .+.|..-+....+..+.-...++.+.+  ....++......---.+.++++ |+.....+..         ..+......
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence            457888888888888888888877663  3455666666565567777777 8766433211         112333444


Q ss_pred             HHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           87 LGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        87 ~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ..++.+..|...+..+.++++-+-++....-=+.+...++.+++|+.+..+..|..+++.|+.+....+
T Consensus       241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            445656669999999999999999999988888899999999999999999999999999999886543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.63  E-value=0.13  Score=43.54  Aligned_cols=75  Identities=21%  Similarity=0.315  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        81 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +..+...|........++..|-+++|-+...++.|..|....+++.++++|+++..+..+-++.-.|+++...++
T Consensus       211 ~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         211 WLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            444444455444448889999999999999999999999999999999999999999999999999988876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.59  E-value=0.16  Score=44.49  Aligned_cols=138  Identities=14%  Similarity=0.040  Sum_probs=80.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHH-------HHHHHhhcCCCChHHHHHHHHH---HHHHHH-HHHHHH---hhhhh---
Q 026238           15 VTLRTLYLLFLGQLVSFTLALMSF-------TSSLIADLGVDAPVTQSAFAYF---SLALVY-GGVLLY---RRQRL---   77 (241)
Q Consensus        15 ~~~~~~~g~~l~~~~a~~~~~~~~-------~~~~l~~~~~~~p~~~~~~R~~---~a~i~l-~~~~~~---~~~~~---   77 (241)
                      +|+++.||+.+++++.+.+++.++       ..+...+ ...+|.....-.+.   ++..+. +.++..   ++++.   
T Consensus       168 ~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~  246 (345)
T PRK13499        168 EEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLK  246 (345)
T ss_pred             cccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc
Confidence            356788999999999999999883       2222212 23445544444443   443333 333331   21111   


Q ss_pred             ------hhh-HHHH---HHHHHHHHHHHHHHHHHhhccchhhhhh---hh-hchHHHHHHHHHHHhcccch------HHH
Q 026238           78 ------RVA-WYWY---LLLGFVDVQGNFLVNKAYQFSSITSVTL---LD-CCTIAWAIVLTWLFLGTRYS------LWQ  137 (241)
Q Consensus        78 ------~~~-~~~~---l~~~~~~~~~~~~~~~al~~~~~~~a~~---l~-~~~Pv~~~l~~~~~l~ek~~------~~~  137 (241)
                            |++ ++.+   .+.|+.-...+.++..+-+..+.+.+..   +. .+..++..+.+. ++||+=+      +..
T Consensus       247 ~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l  325 (345)
T PRK13499        247 ADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVL  325 (345)
T ss_pred             hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHH
Confidence                  111 2333   3334444444777777777776555544   55 555577777776 5888766      456


Q ss_pred             HHHHHHHHHHhHhhccc
Q 026238          138 LLGAALCVLGLGLVLLS  154 (241)
Q Consensus       138 ~~g~~l~~~Gv~li~~~  154 (241)
                      +.|.++.++|.+++...
T Consensus       326 ~~G~vliI~g~~lig~~  342 (345)
T PRK13499        326 SLGCVVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            88888888888887643

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.53  E-value=0.13  Score=39.41  Aligned_cols=129  Identities=16%  Similarity=0.178  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh--h---hhhHHHHHHHHHHHHHHHH
Q 026238           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR--L---RVAWYWYLLLGFVDVQGNF   96 (241)
Q Consensus        22 g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~--~---~~~~~~~l~~~~~~~~~~~   96 (241)
                      .++.+.....+....+.+...+++. ..+|..-++.-+..+.+.+..+...+.++  .   ++..++....|.+|...-.
T Consensus         6 ~ll~~i~aG~~l~~Q~~iN~qL~~~-~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt   84 (150)
T COG3238           6 YLLFAILAGALLPLQAAINGRLARY-LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVT   84 (150)
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhh
Confidence            4556666666666677777777654 33688888899999887777666543221  1   1224455566666655533


Q ss_pred             HHHHHhhccchhhh-hhhhhchHHHHHHHHHHHh----cccchHHHHHHHHHHHHHhHhh
Q 026238           97 LVNKAYQFSSITSV-TLLDCCTIAWAIVLTWLFL----GTRYSLWQLLGAALCVLGLGLV  151 (241)
Q Consensus        97 ~~~~al~~~~~~~a-~~l~~~~Pv~~~l~~~~~l----~ek~~~~~~~g~~l~~~Gv~li  151 (241)
                      .-........++.. .+...-+-+..+++..+=.    +++++..++.|+++.++|+.+.
T Consensus        85 ~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          85 SSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            33344455555444 4667777777777777654    4889999999999999994443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.33  E-value=0.066  Score=44.02  Aligned_cols=73  Identities=16%  Similarity=0.243  Sum_probs=66.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        81 ~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      ++.+.+.++++..++++.+.-..+-++-.-+++..+--.++.+.+.++++.+++.+||+|..+.+.|...=..
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            7788899999999999999999999999999999999999999999999999999999999999998765443

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.04  E-value=0.076  Score=46.42  Aligned_cols=138  Identities=19%  Similarity=0.139  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHH----Hhhhhh----hhhHHHHHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLG--VDAPVTQSAFAYFSLALVYGGVLL----YRRQRL----RVAWYWYLLL   87 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~--~~~p~~~~~~R~~~a~i~l~~~~~----~~~~~~----~~~~~~~l~~   87 (241)
                      +-..|-+++++.|+.++...+..+.-..++  .++--..-.+--++..+++.|.++    ..+.+.    ..+..-+++.
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            556899999999999999998887665332  344222222222444555554443    111111    1223345566


Q ss_pred             HHHHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           88 GFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        88 ~~~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ++.+... .++...|.-.+++-.+++=+..+....++...++.++++++...+|....++|-+.+...+
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~  392 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS  392 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence            6777777 8889999999999999988888888889999999999999999999999999999887665

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.00  E-value=0.0048  Score=52.66  Aligned_cols=121  Identities=19%  Similarity=0.209  Sum_probs=85.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Q 026238           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADL-GVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG   94 (241)
Q Consensus        16 ~~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~-~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~   94 (241)
                      .+|+.+|+.+++...++++.+--+.|+--++ +.      ...|.--+.          .+-++.   +..+.|.+-...
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------~~~ra~~gg----------~~yl~~---~~Ww~G~ltm~v   76 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------SGLRAGEGG----------YGYLKE---PLWWAGMLTMIV   76 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh------hcccccCCC----------cchhhh---HHHHHHHHHHHH
Confidence            3478899999998888777665554443221 10      101110000          001122   233455554555


Q ss_pred             -HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           95 -NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        95 -~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                       ...-+.|+.+.|++-.+.+-+++.+..++++..++|||+++...+|..++++|-..++...
T Consensus        77 Gei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   77 GEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence             8888999999999999999999999999999999999999999999999999988887654

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.91  E-value=0.093  Score=44.64  Aligned_cols=134  Identities=13%  Similarity=0.040  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhhh------h---hhhHHHHHHHHH
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L---RVAWYWYLLLGF   89 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~~------~---~~~~~~~l~~~~   89 (241)
                      ...|+.+-..--++=+..+.....+.+...+++..+.+.--+..+++-...+..++..      .   ++-++.+++.+.
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            3455555444333333444444455545566777777666666666655444433211      1   122788999999


Q ss_pred             HHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhc
Q 026238           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (241)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~  152 (241)
                      ++..++.+.+.-++.-++-.-++++.+--+++++++.+.++.++++.||.|+.+.+.|+.+=.
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHH
Confidence            999998888888888888888888889999999999999999999999999999998877654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.81  E-value=0.5  Score=41.07  Aligned_cols=168  Identities=12%  Similarity=0.134  Sum_probs=104.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHH--h--------hhhhhhhHHHHHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY--R--------RQRLRVAWYWYLLL   87 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~--~--------~~~~~~~~~~~l~~   87 (241)
                      ....|++.-.+.+++.++....-|+..+   .+ ++.-+.-..+...+.+|...-  .        +...........+.
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~---Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG---WS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC---cc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            4556788888888888877777666552   22 333333344444445555431  1        11112234445556


Q ss_pred             HHHHHHHHHHHHHHhhccchhhhh-hhhhchHHHHHHHHHHHhc-------ccchHHHHHHHHHHHHHhHhhcccCCC--
Q 026238           88 GFVDVQGNFLVNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFLG-------TRYSLWQLLGAALCVLGLGLVLLSDAG--  157 (241)
Q Consensus        88 ~~~~~~~~~~~~~al~~~~~~~a~-~l~~~~Pv~~~l~~~~~l~-------ek~~~~~~~g~~l~~~Gv~li~~~~~~--  157 (241)
                      |++--.+...|=.+++|+..+-.. +...+.-++-.++-.++.+       ++-....++|+++.++|+.++...+..  
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            665555577788899999887665 5566666666666555543       233456899999999999998655431  


Q ss_pred             -C--CCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 026238          158 -G--DGGGGSRPLLGDVLVIAGTIFFATSNVGEEF  189 (241)
Q Consensus       158 -~--~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~  189 (241)
                       +  .+..+.+.-+|.+.++.|++.-|.++.-.+.
T Consensus       160 ~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~a  194 (344)
T PF06379_consen  160 KELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDA  194 (344)
T ss_pred             hhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHc
Confidence             1  1112334558999999999998888876653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.72  E-value=0.29  Score=40.85  Aligned_cols=127  Identities=20%  Similarity=0.188  Sum_probs=86.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH-Hhhhhhhhh-----HHHHHHHHH-
Q 026238           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL-YRRQRLRVA-----WYWYLLLGF-   89 (241)
Q Consensus        17 ~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~-~~~~~~~~~-----~~~~l~~~~-   89 (241)
                      .+...|+..-.+.+++.+..++...++.+.+..+.......-+..+.++.+.... .++.+.+++     +-...+.-+ 
T Consensus       110 ~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~  189 (244)
T PF04142_consen  110 QNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIF  189 (244)
T ss_pred             chhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHH
Confidence            4567898888888888999999988887776677777776666666555554443 322222211     111112222 


Q ss_pred             HHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHH
Q 026238           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAAL  143 (241)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l  143 (241)
                      ....+-...-..+||.+.-.=..-....-+.+.+++..+++.+++....+|..+
T Consensus       190 ~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  190 LQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            222225556668899888777788888899999999999999999998887653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=95.03  E-value=0.32  Score=39.68  Aligned_cols=88  Identities=17%  Similarity=0.141  Sum_probs=59.0

Q ss_pred             hhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccCC--------------------CCCCCCCCcc
Q 026238          107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA--------------------GGDGGGGSRP  166 (241)
Q Consensus       107 ~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~~--------------------~~~~~~~~~~  166 (241)
                      ........+..|+++++.+....+||.++.++++.++...|++.-...+.                    .+......+.
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~   83 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNP   83 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccH
Confidence            34455667778888888888888888888888888888888764221110                    0000111244


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhccC
Q 026238          167 LLGDVLVIAGTIFFATSNVGEEFFVKKK  194 (241)
Q Consensus       167 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~  194 (241)
                      ..|..+.+.+..+-+...++.+|..++.
T Consensus        84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~  111 (222)
T TIGR00803        84 VVGLSAVLSALLSSGFAGVYFEKILKDG  111 (222)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence            5777778888888888899999875543

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK02237 hypothetical protein; Provisional

Probab=94.44  E-value=1.2  Score=32.06  Aligned_cols=50  Identities=22%  Similarity=0.571  Sum_probs=37.6

Q ss_pred             chhhhhh-hhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238          106 SITSVTL-LDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus       106 ~~~~a~~-l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +.+.+-. --....+.+.+..+..-|+||+++.++|..++++|+.++...+
T Consensus        57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            3444432 2334455667888999999999999999999999998886543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.81  E-value=0.0078  Score=49.59  Aligned_cols=130  Identities=16%  Similarity=0.166  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhHHHHHHHHHHHHHHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-RQRLRVAWYWYLLLGFVDVQGNF   96 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~   96 (241)
                      ++.+|+.......+.+....+..+...-+ ..++..=....++++++++-   ..+ .++..+.-+.-++.|+.-..+|.
T Consensus       149 n~kkgi~~L~iSt~GYv~yvvl~~~f~v~-g~saiLPqAiGMv~~ali~~---~~~~~~~~~K~t~~nii~G~~Wa~GNl  224 (288)
T COG4975         149 NLKKGIVILLISTLGYVGYVVLFQLFDVD-GLSAILPQAIGMVIGALILG---FFKMEKRFNKYTWLNIIPGLIWAIGNL  224 (288)
T ss_pred             hhhhheeeeeeeccceeeeEeeecccccc-chhhhhHHHHHHHHHHHHHh---hcccccchHHHHHHHHhhHHHHHhhHH
Confidence            35578888777777766665555544422 23333333355555555432   222 12222223345577877777799


Q ss_pred             HHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHH----HHHHHHHHhHhh
Q 026238           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLL----GAALCVLGLGLV  151 (241)
Q Consensus        97 ~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~----g~~l~~~Gv~li  151 (241)
                      +++.|-+....+++=-+..+..+.+.+-+.+++|||=+++++.    |+++.++|.+++
T Consensus       225 ~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l  283 (288)
T COG4975         225 FMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL  283 (288)
T ss_pred             HHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence            9999999988888888899999999999999999999998865    445555555544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=93.64  E-value=0.27  Score=37.26  Aligned_cols=54  Identities=20%  Similarity=0.221  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc-------CChHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026238          169 GDVLVIAGTIFFATSNVGEEFFVKK-------KDRVEVVCMIGVYGLLVSAVQLSILELKS  222 (241)
Q Consensus       169 G~~l~l~a~~~~a~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  222 (241)
                      |.++++.|.++.|++.++.|+..++       .++.+...+....+.+.+..+....|+..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~   61 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQ   61 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            6789999999999999999987544       46889999999999988874455556544

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=93.32  E-value=1  Score=32.30  Aligned_cols=54  Identities=26%  Similarity=0.556  Sum_probs=40.7

Q ss_pred             hhccchhhhh-hhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238          102 YQFSSITSVT-LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus       102 l~~~~~~~a~-~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ++-.+.+.+- .-=....+.+.+..+.+-|+||++..++|..++++|+.++...+
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            4444444443 23344566778889999999999999999999999999987654

; GO: 0016020 membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=93.08  E-value=1.6  Score=36.94  Aligned_cols=136  Identities=14%  Similarity=0.045  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHH---Hhhhhh-hh----------hHHH
Q 026238           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL---YRRQRL-RV----------AWYW   83 (241)
Q Consensus        18 ~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~---~~~~~~-~~----------~~~~   83 (241)
                      ....|+.+..++.+..+-++.......+..+-++-+..++-..+....++...-   -+++.. +.          ....
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~  240 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPS  240 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccH
Confidence            456888888888888888888877777665667788888888777766543321   111110 00          0111


Q ss_pred             HHHHHHHHHHHHHHHHHHh----hccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           84 YLLLGFVDVQGNFLVNKAY----QFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        84 ~l~~~~~~~~~~~~~~~al----~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      ..+.-++....++.-..+.    ..+++-++++....-=.++.+++.+.++.+.+++.|+|..+.++|.++-..
T Consensus       241 ~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  241 MWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            1111122222233322222    224556677778888999999999999999999999999999999988753

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.75  E-value=1.5  Score=37.60  Aligned_cols=135  Identities=10%  Similarity=-0.025  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh--hh---------hhhHHHHHHHHH
Q 026238           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--RL---------RVAWYWYLLLGF   89 (241)
Q Consensus        21 ~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~--~~---------~~~~~~~l~~~~   89 (241)
                      .|....+.-.+..+......|.-.+.....-+.+.++.-+++...+.........  ..         ...+-.+.+.|+
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            3555555555555555555444433333344556666666666655444322211  00         011456778888


Q ss_pred             HHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +++..+++..+..+..++..-++.-...-..+.+...++.+++.++....|+.+++.|-++-....
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            888889999999999998888877766667777788888889999999999999999988876544

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.97  E-value=2.1  Score=36.23  Aligned_cols=114  Identities=12%  Similarity=0.139  Sum_probs=78.9

Q ss_pred             HHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh----------hhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhhhh
Q 026238           42 LIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ----------RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVT  111 (241)
Q Consensus        42 ~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~  111 (241)
                      ...+....+...++++-+.++.++++........          .+.+......+.+..++.+..+...=++--++..++
T Consensus       211 k~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aa  290 (367)
T KOG1582|consen  211 KAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAA  290 (367)
T ss_pred             HHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHH
Confidence            3333334445666777777776666554443321          112224445555666666644444445556888899


Q ss_pred             hhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238          112 LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus       112 ~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      .+...---.|++++.+++.++.+-+...+.++.+.|+.+=..++
T Consensus       291 tvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  291 TVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999999999877765

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=91.63  E-value=0.37  Score=34.72  Aligned_cols=42  Identities=17%  Similarity=0.061  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHhhh
Q 026238          178 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL  220 (241)
Q Consensus       178 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  220 (241)
                      ++||.+.+..|+..++.|+...+.+....+.+ ..+.....+.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   42 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGR   42 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcc
Confidence            47899999999998999999999999999987 5433333433

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=89.03  E-value=14  Score=31.87  Aligned_cols=131  Identities=15%  Similarity=0.136  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHH-Hhhhh-------hhh-----hHHHH
Q 026238           21 YLLFLGQLVSFTLALMSFTSSLIADL---GVDAPVTQSAFAYFSLALVYGGVLL-YRRQR-------LRV-----AWYWY   84 (241)
Q Consensus        21 ~g~~l~~~~a~~~~~~~~~~~~l~~~---~~~~p~~~~~~R~~~a~i~l~~~~~-~~~~~-------~~~-----~~~~~   84 (241)
                      .|..+-...+.+.+.-+..++.+.++   +.-+|....+.-.-...+.++|... ..+..       .+.     .++.+
T Consensus       164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~  243 (349)
T KOG1443|consen  164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVI  243 (349)
T ss_pred             hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHH
Confidence            67777777777777777788877643   2234665554444444444444433 22211       111     12333


Q ss_pred             HHHHHHHHHH---HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhh
Q 026238           85 LLLGFVDVQG---NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (241)
Q Consensus        85 l~~~~~~~~~---~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li  151 (241)
                      -.++..+...   -...+.=+..++.-..++.--.-=+.+.+++....+|+++...|.|..++..|+.+-
T Consensus       244 g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  244 GLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            3333333333   344445556677666666666677889999999999999999999999999998876

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=88.96  E-value=0.64  Score=39.24  Aligned_cols=135  Identities=15%  Similarity=0.160  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHhhh--------hh-hhh-HHHHHHHH
Q 026238           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--------RL-RVA-WYWYLLLG   88 (241)
Q Consensus        19 ~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~~~--------~~-~~~-~~~~l~~~   88 (241)
                      -+.|+++|+..++.-+..+..+++.-..-...-+.++++.-+.+.++++|.+...+.        .. ..+ |..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            458999999999999999888874432212234667778889999999998864321        11 112 33334445


Q ss_pred             HHHHHHHHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      ++|+..++.-.+=+|.++|-+-.+=-..-...=.+++..+++|.-+...|.+-.+.+.|......
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            55554444333344455554333333333444567888999999999999999888888777654

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=88.59  E-value=7.1  Score=27.91  Aligned_cols=40  Identities=28%  Similarity=0.620  Sum_probs=33.6

Q ss_pred             chHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238          116 CTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus       116 ~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      ...+.+.+..++.-|.+|+++.+.|..++++|+.++...+
T Consensus        67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p  106 (109)
T COG1742          67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP  106 (109)
T ss_pred             hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence            3455667778888999999999999999999988887654

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.47  E-value=1.1  Score=32.09  Aligned_cols=70  Identities=20%  Similarity=0.229  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhc
Q 026238           83 WYLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (241)
Q Consensus        83 ~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~  152 (241)
                      .+++.=.+.-.++.+|+.-+++++.+.++.+ +++.-.++++.+..+-.|-..++.++|..+.+.|+.+.+
T Consensus        54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            3444444555568889999999999999955 566777788888876666677788999999999988754

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=88.18  E-value=17  Score=31.81  Aligned_cols=138  Identities=15%  Similarity=0.099  Sum_probs=86.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHh-hhhhh-hh----HHHHHHHHH
Q 026238           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-RQRLR-VA----WYWYLLLGF   89 (241)
Q Consensus        16 ~~~~~~g~~l~~~~a~~~~~~~~~~~~l~~~~~~~p~~~~~~R~~~a~i~l~~~~~~~-~~~~~-~~----~~~~l~~~~   89 (241)
                      +.+.+.|+......++..+..++...++.+.+..+-+.....-+.++.++.+.-+..+ ..+.. ..    +-+..+.-+
T Consensus       178 ~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vV  257 (345)
T KOG2234|consen  178 AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVV  257 (345)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHH
Confidence            4567788887777777777777777777766666666666444555555544444322 21111 11    112222222


Q ss_pred             HHHHH-HHHHHHHhhccchhhhhhhhhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238           90 VDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus        90 ~~~~~-~~~~~~al~~~~~~~a~~l~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      +.... -.+.-.-.+|.+--.=..-.....+++.+.+..+++.+|+....+|+.+.+..+.+-..
T Consensus       258 l~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~  322 (345)
T KOG2234|consen  258 LLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL  322 (345)
T ss_pred             HHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence            22222 33444455666554444555567788899999999999999999999999998888763

>COG2510 Predicted membrane protein [Function unknown]

Probab=88.02  E-value=2.8  Score=31.28  Aligned_cols=47  Identities=9%  Similarity=0.053  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHH
Q 026238          169 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQL  215 (241)
Q Consensus       169 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  215 (241)
                      ..+++++|++.+++..++.|--.++.||...+.....+..+.+.+..
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~   50 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVL   50 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999988889999999998888887776333

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=85.16  E-value=5.9  Score=32.61  Aligned_cols=107  Identities=8%  Similarity=0.045  Sum_probs=75.1

Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHH--hhhh------hhhh-HHHHHHHHHHHHHHHHHHHHHhhccchhhhhhhhhch
Q 026238           47 GVDAPVTQSAFAYFSLALVYGGVLLY--RRQR------LRVA-WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCT  117 (241)
Q Consensus        47 ~~~~p~~~~~~R~~~a~i~l~~~~~~--~~~~------~~~~-~~~~l~~~~~~~~~~~~~~~al~~~~~~~a~~l~~~~  117 (241)
                      ....-+...++.-+++..+++.+-..  +|.+      ++.+ .-++.+.|++.+...++--+.++-++...-+.+-.+.
T Consensus       181 tNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALN  260 (309)
T COG5070         181 TNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALN  260 (309)
T ss_pred             cccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhh
Confidence            33444666677777777766555332  2222      1222 3456677777777788888888888888888887777


Q ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcc
Q 026238          118 IAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (241)
Q Consensus       118 Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~  153 (241)
                      -.-.++.+.++++|+.+...+.++++++...++...
T Consensus       261 Klp~alaGlvffdap~nf~si~sillGflsg~iYav  296 (309)
T COG5070         261 KLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV  296 (309)
T ss_pred             hChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence            777788888889999888888888888877665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	241
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.71
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.65

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.71  E-value=2.9e-07  Score=66.25  Aligned_cols=70  Identities=17%  Similarity=0.282  Sum_probs=61.7

Q ss_pred             HHHHHHHHH-HHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           86 LLGFVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        86 ~~~~~~~~~-~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +.+...... ..++..++++.|.+.+..+ ..+.|+.+++.+++++||++++.+++|+.+.++|++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            455555555 7888889999999999988 899999999999999999999999999999999999986544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.65  E-value=8.1e-08  Score=71.78  Aligned_cols=70  Identities=17%  Similarity=0.282  Sum_probs=51.1

Q ss_pred             HHHHHHHHH-HHHHHHHhhccchhhhhhh-hhchHHHHHHHHHHHhcccchHHHHHHHHHHHHHhHhhcccC
Q 026238           86 LLGFVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (241)
Q Consensus        86 ~~~~~~~~~-~~~~~~al~~~~~~~a~~l-~~~~Pv~~~l~~~~~l~ek~~~~~~~g~~l~~~Gv~li~~~~  155 (241)
                      +.+++.... +.++..++++.|++.+..+ .++.|++++++++++++|++++.+++|++++++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            455555555 8889999999999999988 899999999999999999999999999999999999986543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00