Citrus Sinensis ID: 026252

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
Protein Sequence
MASTTFSLSLSTLASSTAYNSGNHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCCG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHccccccccccEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEHHHHccccccccccccccEEcccccccccccccccccccccccccccccccccHHccccccccccccccEEEEEccccEcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHccccHHHHcEEEEccccccccccccccc
Coil and Loop (DISEMBL)
MASTTFSLSLSTLASstaynsgnhiptiscksneksslclssssflgsrlnvsrrtssanpmsmrnVRVTCsasvlpsallfdcdgvlvdtekdghrisfndtfkekelgvtwDVDLYGELLkigggkerMTAYFnktgwpekapsdeEERKQFIASLHKRKTELFMVLIEkkllplrpGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIfagdvvprkkpdplccg
Flexible Loop (DISEMBL)
MASTTFSLSLSTLASSTAYNSGNHIPTISCKSNEKSSLCLSsssflgsrlnvsrrtssanpmsmrNVRVTCSASVLPSALLFDCDGVLVDTEKDghrisfndtfkekelgvtwdVDLYGELLKIGGGKERMTAYFNKtgwpekapsdeEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAvcstsnekAVTAIVSFLLGPERAEKIQifagdvvprkkpdplccg
Low Complexity Region (SEG)
MasttfslslstlasstaYNSGNHIPTIscksneksslclssssflgsrlnvsRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCCG
Disordered region (IsUnstruct)
******************************************************************VRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGW*************FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV***********
Disordered Region (DISOPRED)
**********ST*****************************************************************SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCCG
Disordered Region (DISEMBL)
*********LSTLASSTAYNSGNHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWP**********KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK********
Disordered Region (DISPRO)
*****FSLSLSTLASSTAYNS*NH*P*ISC*******************************************SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP***C**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASTTFSLSLSTLASSTAYNSGNHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCCG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	241	2.2.26 [Sep-21-2011]
O33513	227	Protein CbbY OS=Rhodobact	yes	no	0.622	0.660	0.375	1e-20
P95649	230	Protein CbbY OS=Rhodobact	yes	no	0.618	0.647	0.391	2e-20
P40119	254	Protein CbbY, chromosomal	yes	no	0.630	0.598	0.369	2e-19
Q04541	254	Protein CbbY, plasmid OS=	yes	no	0.630	0.598	0.363	1e-18

>sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 10/160 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL+FD DG L +TE + HR +FN+TF  + L   W  + Y  LL+  GGKERM  +    
Sbjct: 5   ALIFDVDGTLAETE-EVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHRENL 63

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
           G     PSD +     IA LHK KT+ ++ +I    + L PGVA+LID+A   G+++A+ 
Sbjct: 64  G---SGPSDAK-----IADLHKAKTQRYVEIIASGQVGLLPGVAELIDRAKASGLRLAIA 115

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIF-AGDVVPRKKPDP 237
           +T+    V A+++        +  ++  AGD V +KKP P
Sbjct: 116 TTTTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAP 155

Rhodobacter capsulatus (taxid: 1061)

>sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 12/161 (7%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NK 137
           A+LFD DG L +TE + HR +FN+TF    +   WD + Y ELL   GGKER+  +  ++
Sbjct: 4   AILFDVDGTLAETE-ELHRRAFNETFAALGVDWFWDREEYRELLTTTGGKERIARFLRHQ 62

Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
            G P   P         IA +H+ KTE F+ L+ +  + LRPG+A LI +A   G+++AV
Sbjct: 63  KGDPAPLP---------IADIHRAKTERFVALMAEGEIALRPGIADLIAEAKRAGIRLAV 113

Query: 198 CSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPRKKPDP 237
            +T++   V A+     G P R     I AGD+V  KKP P
Sbjct: 114 ATTTSLPNVEALCRACFGHPAREIFDVIAAGDMVAEKKPSP 154

Rhodobacter sphaeroides (taxid: 1063)

>sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 13/165 (7%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
            AL+FD DG L DTE   H  +FN  F E  L   WD  LY  LLK+ GGKER+  Y+  
Sbjct: 2   QALIFDVDGTLADTES-AHLQAFNAAFAEVGLDWYWDAPLYTRLLKVAGGKERLMHYWRM 60

Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                     EE R    K+ I ++H  KT  +   +    LPLRPG+A+LID+A E G+
Sbjct: 61  V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIDEAGEAGL 113

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDP 237
            +A+ +T+    + A++   LG + R     I        KKP P
Sbjct: 114 PLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKPAP 158

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

>sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1

 Score = 93.6 bits (231), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
            AL+FD DG L DTE   H  +FN  F E  L   WD  LY  LLK+ GGKER+  Y+  
Sbjct: 2   QALIFDVDGTLADTET-AHLQAFNAAFAEVGLDWHWDAPLYTRLLKVAGGKERLMHYWRM 60

Query: 138 TGWPEKAPSDEEER----KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                     EE R    K+ I ++H  KT  +   +    LPLRPG+A+LI +A E G+
Sbjct: 61  V-------DPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPLRPGIARLIAEAGEAGL 113

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKPDP 237
            +A+ +T+    + A++   LG + R     I        KKP P
Sbjct: 114 PLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIKKPAP 158

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
255540407	321	2-deoxyglucose-6-phosphate phosphatase,	0.966	0.725	0.735	8e-90
118488927	328	unknown [Populus trichocarpa x Populus d	0.813	0.597	0.82	6e-88
224136009	328	predicted protein [Populus trichocarpa]	0.813	0.597	0.815	4e-87
225456794	324	PREDICTED: protein CbbY [Vitis vinifera]	0.804	0.598	0.789	2e-86
449440594	319	PREDICTED: protein CbbY-like [Cucumis sa	0.809	0.611	0.798	2e-85
21554817	319	unknown [Arabidopsis thaliana]	0.784	0.592	0.811	2e-85
18408627	319	haloacid dehalogenase-like hydrolase dom	0.784	0.592	0.811	2e-85
388512915	329	unknown [Lotus japonicus]	0.838	0.613	0.738	4e-85
51970096	319	unknown protein [Arabidopsis thaliana]	0.784	0.592	0.811	5e-85
4678346	686	putative protein [Arabidopsis thaliana]	0.784	0.275	0.811	1e-84

>gi|255540407|ref|XP_002511268.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223550383|gb|EEF51870.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]

 Score =  335 bits (860), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 178/242 (73%), Positives = 198/242 (81%), Gaps = 9/242 (3%)

Query: 1   MASTTFSLSLSTLASSTAYNSG---NHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTS 57
           MAS + SLSL+T + S++ +      + P IS   + KS L   SS+  G+++ V +  +
Sbjct: 1   MASNSISLSLATFSISSSPSFSSSQKNTP-ISILKSCKSKL---SSTLFGTKVCVDKTKA 56

Query: 58  SA--NPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV 115
           S   N  S  +   TC AS LPSALLFDCDGVLVDTEKDGHRISFNDTF E+ELGVTWDV
Sbjct: 57  SKAINKRSTTSTGFTCLASALPSALLFDCDGVLVDTEKDGHRISFNDTFNERELGVTWDV 116

Query: 116 DLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLL 175
           DLYGELLKIGGGKERMTAYFNKTGWPEKAP +EEERK+FIASLHKRKTELFM LIEKKLL
Sbjct: 117 DLYGELLKIGGGKERMTAYFNKTGWPEKAPKNEEERKEFIASLHKRKTELFMALIEKKLL 176

Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
           PLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVS LLGPERAEKI+IFAGDVVPRKKP
Sbjct: 177 PLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVPRKKP 236

Query: 236 DP 237
           DP
Sbjct: 237 DP 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488927|gb|ABK96272.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 164/200 (82%), Positives = 175/200 (87%), Gaps = 4/200 (2%)

Query: 42  SSSFLGSRLNVSRRTSSANPMSMRNVR--VTC--SASVLPSALLFDCDGVLVDTEKDGHR 97
           SSS LG+R+ V  +T+    +   +     TC  S+SVLPSALLFDCDGVLVDTEKDGHR
Sbjct: 46  SSSLLGTRIRVYNKTARTRVVEKSSTSNGTTCLASSSVLPSALLFDCDGVLVDTEKDGHR 105

Query: 98  ISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
           ISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKT WPEKAP  EEERK+FIAS
Sbjct: 106 ISFNDTFNERELGVTWDVDLYGELLKIGGGKERMTAYFNKTRWPEKAPKSEEERKEFIAS 165

Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
           LHKRKTELFM LIEKKLLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG E
Sbjct: 166 LHKRKTELFMALIEKKLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGAE 225

Query: 218 RAEKIQIFAGDVVPRKKPDP 237
           RAEKI+IFAGDVVPRKKPDP
Sbjct: 226 RAEKIKIFAGDVVPRKKPDP 245

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136009|ref|XP_002322216.1| predicted protein [Populus trichocarpa] gi|222869212|gb|EEF06343.1| predicted protein [Populus trichocarpa]

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 163/200 (81%), Positives = 174/200 (87%), Gaps = 4/200 (2%)

Query: 42  SSSFLGSRLNVSRRTSSANPMSMRNVR--VTC--SASVLPSALLFDCDGVLVDTEKDGHR 97
           SSS LG+R+ V  +T+    +   +     TC  S+SVLPSALLFDCDGVLVDTEKDGHR
Sbjct: 46  SSSLLGTRIRVYNKTTRTRVVEKSSTSNGTTCLASSSVLPSALLFDCDGVLVDTEKDGHR 105

Query: 98  ISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIAS 157
           ISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKT WPEKAP  E ERK+FIAS
Sbjct: 106 ISFNDTFNERELGVTWDVDLYGELLKIGGGKERMTAYFNKTRWPEKAPKSEVERKEFIAS 165

Query: 158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE 217
           LHKRKTELFM LIEKKLLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG E
Sbjct: 166 LHKRKTELFMALIEKKLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGAE 225

Query: 218 RAEKIQIFAGDVVPRKKPDP 237
           RAEKI+IFAGDVVPRKKPDP
Sbjct: 226 RAEKIKIFAGDVVPRKKPDP 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456794|ref|XP_002277650.1| PREDICTED: protein CbbY [Vitis vinifera] gi|297733644|emb|CBI14891.3| unnamed protein product [Vitis vinifera]

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 165/209 (78%), Positives = 176/209 (84%), Gaps = 15/209 (7%)

Query: 42  SSSFLGSRLNVSRRT-------SSANPMSMRNVRVT------CSASVLPSALLFDCDGVL 88
           SSS  G+R  ++RR        ++  P+  R  R +      CSA  LPSALLFDCDGVL
Sbjct: 35  SSSLFGTRPGITRRAITTTTTTTTTRPVIRRGARHSGVRFSVCSA--LPSALLFDCDGVL 92

Query: 89  VDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDE 148
           VDTEKDGHRISFNDTF E+ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAP  E
Sbjct: 93  VDTEKDGHRISFNDTFAERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPKSE 152

Query: 149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA 208
           EERK+FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL KGV VAVCSTSNEKAV+A
Sbjct: 153 EERKEFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALGKGVNVAVCSTSNEKAVSA 212

Query: 209 IVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           IVS LLGPERAEKI+IFAGDVVPRKKPDP
Sbjct: 213 IVSCLLGPERAEKIKIFAGDVVPRKKPDP 241

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440594|ref|XP_004138069.1| PREDICTED: protein CbbY-like [Cucumis sativus] gi|449501370|ref|XP_004161349.1| PREDICTED: protein CbbY-like [Cucumis sativus]

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/199 (79%), Positives = 174/199 (87%), Gaps = 4/199 (2%)

Query: 42  SSSFLGSRLNVSRRTSSANPMSMRNVR--VTCSAS-VLPSALLFDCDGVLVDTEKDGHRI 98
           S+S LG  L++   TS   P   +N    +TC AS +LPSALLFDCDGVLVDTEKDGHRI
Sbjct: 39  STSLLGKSLSL-YPTSRIRPTDAKNASNGITCQASSILPSALLFDCDGVLVDTEKDGHRI 97

Query: 99  SFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL 158
           SFN+TF+EKELGVTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE+ERK FIA L
Sbjct: 98  SFNETFEEKELGVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEDERKAFIAGL 157

Query: 159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
           HKRKT+LFM LIEK+LLPLRPGVAKLIDQAL KGVKVAVCSTSNEKAV+AIVSFLLG +R
Sbjct: 158 HKRKTDLFMALIEKQLLPLRPGVAKLIDQALGKGVKVAVCSTSNEKAVSAIVSFLLGSQR 217

Query: 219 AEKIQIFAGDVVPRKKPDP 237
           AE+I+IFAGDVVPRKKPDP
Sbjct: 218 AEQIKIFAGDVVPRKKPDP 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554817|gb|AAM63700.1| unknown [Arabidopsis thaliana]

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 172/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408627|ref|NP_566903.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|13877975|gb|AAK44065.1|AF370250_1 unknown protein [Arabidopsis thaliana] gi|17104703|gb|AAL34240.1| unknown protein [Arabidopsis thaliana] gi|26451286|dbj|BAC42744.1| unknown protein [Arabidopsis thaliana] gi|51969874|dbj|BAD43629.1| unknown protein [Arabidopsis thaliana] gi|51971787|dbj|BAD44558.1| unknown protein [Arabidopsis thaliana] gi|332644893|gb|AEE78414.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 172/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512915|gb|AFK44519.1| unknown [Lotus japonicus]

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 164/222 (73%), Positives = 181/222 (81%), Gaps = 20/222 (9%)

Query: 23  NHIPTISCKSNEKSSLCLSSSSFLGSRLNVSRRTSSANPMSMRNV---RVTCSASV---- 75
           +H+PT S          L+ +S L S L +S  +S A   SMR     R++CSAS     
Sbjct: 38  HHVPTSS----------LTGTSTLAS-LKIS--SSPATTTSMRTATRRRLSCSASASPST 84

Query: 76  LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
           LPSALLFDCDGVLVDTEKDGHRISFN TF+E+ELGVTWDVDLYGELLKIGGGKERMTAYF
Sbjct: 85  LPSALLFDCDGVLVDTEKDGHRISFNQTFQERELGVTWDVDLYGELLKIGGGKERMTAYF 144

Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
           NKTGWP  APS E+ERK+F+ASLHK+KTELFM LIEKKLLPLRPGVAKL+DQAL +GV V
Sbjct: 145 NKTGWPANAPSGEQERKEFVASLHKQKTELFMALIEKKLLPLRPGVAKLVDQALTQGVNV 204

Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           AVCSTSNE AV+AIVSFLLGPERAEKIQIFAGDVV RKKPDP
Sbjct: 205 AVCSTSNENAVSAIVSFLLGPERAEKIQIFAGDVVHRKKPDP 246

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51970096|dbj|BAD43740.1| unknown protein [Arabidopsis thaliana]

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 171/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE +L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKEGDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana]

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 172/196 (87%), Gaps = 7/196 (3%)

Query: 49  RLNVSRRTSSANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFN 101
           +L  + ++  A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFN
Sbjct: 41  KLRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFN 100

Query: 102 DTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKR 161
           DTFKE++L VTWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+
Sbjct: 101 DTFKERDLNVTWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQ 160

Query: 162 KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK 221
           KTELFMVLIEKKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEK
Sbjct: 161 KTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEK 220

Query: 222 IQIFAGDVVPRKKPDP 237
           I+IFAGDVVP+KKPDP
Sbjct: 221 IKIFAGDVVPKKKPDP 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	241
TAIR|locus:2101165	319	AT3G48420 [Arabidopsis thalian	0.742	0.561	0.849	4.2e-79
TAIR|locus:2140050	316	AT4G39970 [Arabidopsis thalian	0.755	0.575	0.345	3.3e-24
TAIR|locus:2153348	372	AT5G45170 "AT5G45170" [Arabido	0.655	0.424	0.317	6.7e-15
TIGR_CMR|GSU_1839	228	GSU_1839 "hydrolase, haloacid	0.589	0.622	0.294	4.5e-05
UNIPROTKB|Q88A30	272	PSPTO_0567 "Phosphoglycolate p	0.605	0.536	0.286	0.00091

TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)]

 Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
 Identities = 158/186 (84%), Positives = 167/186 (89%)

Query:    59 ANPM---SMRNVRVTCSAS----VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV 111
             A PM   S R+V VTCSAS     LPSALLFDCDGVLVDTEKDGHRISFNDTFKE++L V
Sbjct:    51 AKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFNDTFKERDLNV 110

Query:   112 TWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
             TWDVDLYGELLKIGGGKERMTAYFNK GWPEKAP DE ERK+FIA LHK+KTELFMVLIE
Sbjct:   111 TWDVDLYGELLKIGGGKERMTAYFNKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIE 170

Query:   172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231
             KKLLPLRPGVAKL+DQAL  GVKVAVCSTSNEKAV+AIVS LLGPERAEKI+IFAGDVVP
Sbjct:   171 KKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVP 230

Query:   232 RKKPDP 237
             +KKPDP
Sbjct:   231 KKKPDP 236

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 69/200 (34%), Positives = 109/200 (54%)

Query:    55 RTSSANPMSMRNVRVTCSASVLPS--ALLFDCDGVLVDTEKDGHRISFNDTFKEKEL--- 109
             R  S +  S   V    SA  L S  AL+FDCDGV++++E + HR ++ND F   ++   
Sbjct:    39 RFKSRSVYSKSRVSSPVSALPLRSLEALIFDCDGVILESE-NLHRQAYNDAFSHFDVRCP 97

Query:   110 -----GVTWDVDLYGELLK-IGGGKERMTAYFNKTGWP-----EKAPSDEEERKQFIASL 158
                   + W ++ Y +    +GGGK +M  YF + GWP     +  P ++++R + I +L
Sbjct:    98 PSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQNDDDRAKLIDTL 157

Query:   159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER 218
                KTE +  +I+   +  RPGV +L+D+A   G K+AVCS + + +V   +  L+  ER
Sbjct:   158 QDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVILCLENLIDIER 217

Query:   219 AEKIQIF-AGDVVPRKKPDP 237
              + +  F AGD V  KKPDP
Sbjct:   218 FQGLDCFLAGDDVKEKKPDP 237

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 6.7e-15, P = 6.7e-15
 Identities = 54/170 (31%), Positives = 86/170 (50%)

Query:    79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGGGKER--MTAYF 135
             A++ + D V++DT    +R +FN  F++  L    W   +Y +LL+ G   E   +  YF
Sbjct:    80 AVILEVDRVMIDTWSS-NRQAFNVAFQKLGLDCANWPEPVYSDLLRKGAADEEKMLLLYF 138

Query:   136 NKTGWPEKAPSDEEERKQFIAS-LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
             N+ GWP   P+ E  +  F+ S L ++K  +   LI K L PLR GV + ID A  + V 
Sbjct:   139 NQIGWPSSLPTSE--KASFVKSVLREKKNAMDEFLISKSL-PLRSGVQEFIDNAYAEKVP 195

Query:   195 VAVCST---SNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCCG 241
             VA+ +    S +K   +IV  +LG ER   +++   + V +     L  G
Sbjct:   196 VAIVTAYCKSGDKVALSIVE-MLGQERLPNVKVIGDNEVEQSMYGQLVLG 244

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0015979 "photosynthesis" evidence=RCA

TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 115 (45.5 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 48/163 (29%), Positives = 77/163 (47%)

Query:    78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD--VDLYGELLKIG-GGKERMTAY 134
             SA++FD DG++VDTE   +R +F    +    G +W+  VD+Y     +G   ++     
Sbjct:     3 SAVIFDFDGIIVDTEPLHYR-AFQAILEPIGFGYSWEAYVDVY-----MGYDDRDAFREA 56

Query:   135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
             F   G      +D E+R+  +  L  RK   F  +I   + P  PGV +LI + ++    
Sbjct:    57 FRVRG------ADLEDRE--LEGLIARKAAAFQEIIASGVTPY-PGVVELI-RNIKANHP 106

Query:   195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             VA+CS +    +  I+  L G      + + A D V   KPDP
Sbjct:   107 VALCSGALRSDILPILEGL-GLSGIFDVMVTA-DEVSASKPDP 147

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|Q88A30 PSPTO_0567 "Phosphoglycolate phosphatase" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)]

 Score = 106 (42.4 bits), Expect = 0.00091, P = 0.00091
 Identities = 49/171 (28%), Positives = 79/171 (46%)

Query:    73 ASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMT 132
             A  LP  ++FD DG LVD+  D              L V  D  L  EL +   G E + 
Sbjct:     9 AGKLPKLIMFDLDGTLVDSVPD--------------LAVAVDTML-AELGRPTAGLESVR 53

Query:   133 AYFNKTGWP---EKAPSDEEERKQFIASLHKRKTELFM-VLIEK-KLLPLRPGVAKLIDQ 187
             A+    G P    +A ++  +      +L +R  ++FM    EK +   + PGV + +  
Sbjct:    54 AWVGN-GAPVLVRRALANNLDHSGVDEALAERGLDIFMRAYAEKHEFTVVYPGVRETLKW 112

Query:   188 ALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDP 237
               + GV++A+ +   E+ V  ++  + LG  R  +  I  GD +P+KKPDP
Sbjct:   113 LQKMGVEMALITNKPERFVAPLLDEMKLG--RFFR-WIIGGDTMPQKKPDP 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       199   0.00085  111 3  11 22  0.49    32
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  159 KB (2095 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.01u 0.11s 20.12t   Elapsed:  00:00:01
  Total cpu time:  20.01u 0.11s 20.12t   Elapsed:  00:00:01
  Start:  Fri May 10 04:34:38 2013   End:  Fri May 10 04:34:39 2013

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_XV0627	haloacid dehalogenase-like hydrolase family protein (EC-2.7.7.2) (329 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIX.851.1	hypothetical protein (317 aa)				•			•		0.423

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	241
PLN02779	286	PLN02779, PLN02779, haloacid dehalogenase-like hyd	1e-109
COG0637	221	COG0637, COG0637, Predicted phosphatase/phosphohex	7e-18
TIGR01509	177	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup	5e-16
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	5e-13
TIGR02009	185	TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f	4e-11
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	7e-11
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	2e-09
TIGR01990	185	TIGR01990, bPGM, beta-phosphoglucomutase	2e-07
PLN02919	1057	PLN02919, PLN02919, haloacid dehalogenase-like hyd	7e-04
PRK13222	226	PRK13222, PRK13222, phosphoglycolate phosphatase;	0.001
TIGR01549	162	TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup	0.001

>gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein

 Score =  315 bits (808), Expect = e-109
 Identities = 125/203 (61%), Positives = 145/203 (71%), Gaps = 5/203 (2%)

Query: 41  SSSSFLGSRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISF 100
           SSS+ L S                     + SAS LP ALLFDCDGVLV+TE+DGHR++F
Sbjct: 4   SSSARLASASRTRAGRRRRRRSRSTARVASASASALPEALLFDCDGVLVETERDGHRVAF 63

Query: 101 NDTFKEKEL-GVTWDVDLYGELLKIGGGKERMTAYFNKTGWP----EKAPSDEEERKQFI 155
           ND FKE  L  V WDV+LY ELL IGGGKERMT YFN+ GWP    EKAP DEEERK+ +
Sbjct: 64  NDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDEEERKELV 123

Query: 156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG 215
            SLH RKTELF  LIE   LPLRPGV +L+D+AL  G+KVAVCSTSNEKAV+ IV+ LLG
Sbjct: 124 DSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLG 183

Query: 216 PERAEKIQIFAGDVVPRKKPDPL 238
           PERA+ + +FAGD VP+KKPDP 
Sbjct: 184 PERAQGLDVFAGDDVPKKKPDPD 206

Length = 286

>gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]

 Score = 79.0 bits (195), Expect = 7e-18
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A++FD DG LVD+E   H  ++ +    KE G+    +   EL   GGG  R+     K 
Sbjct: 4   AVIFDMDGTLVDSE-PLHARAWLEAL--KEYGIEISDEEIREL--HGGGIARIIDLLRKL 58

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
               + P+D  E ++          E   + +E   L   PGV +L++Q   +G+ +AV 
Sbjct: 59  -AAGEDPADLAELER-------LLYEAEALELEG--LKPIPGVVELLEQLKARGIPLAVA 108

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           S+S  +A   +++ L   +  + I + A D V R KP P
Sbjct: 109 SSSPRRAAERVLARLGLLDYFDVI-VTADD-VARGKPAP 145

Length = 221

>gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

 Score = 72.8 bits (179), Expect = 5e-16
 Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGVLVDT                E  +    +L    +        +     + 
Sbjct: 1   AVLFDLDGVLVDTAHAIA-----KLVDRAEFPLV-PDELGVSEV------GSLELALRRW 48

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                     E+ +           +LF   +EK+ L   PGV  L++    +G K+A+ 
Sbjct: 49  KAKYGRTMSAEDAQLLY-------KQLFYEALEKEGLKPLPGVRALLEALRARGKKLALL 101

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S      A +   LG      + I + DV    KPDP
Sbjct: 102 TNSP--RADAKLVLELGLRALFDVVIDSSDVG-LGKPDP 137

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 65.9 bits (161), Expect = 5e-13
 Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 18/160 (11%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DG LVD+  +    +FN    E  L     +D       IG G + +       
Sbjct: 6   AILFDLDGTLVDSA-EDILRAFNAALAELGLP---PLDEEEIRQLIGLGLDELIERLLGE 61

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                  +DEE   + +  L +     +    E     L PGV +L+      G K+ + 
Sbjct: 62  -------ADEEAAAELVERLREEFLTAYA---ELLESRLFPGVKELLAALKSAGYKLGIV 111

Query: 199 STSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDP 237
           +   E+ +  ++  L L         I  GD VP  KPDP
Sbjct: 112 TNKPERELDILLKALGLADYFDV---IVGGDDVPPPKPDP 148

Length = 220

>gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase

 Score = 59.7 bits (145), Expect = 4e-11
 Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 24/165 (14%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
             A++FD DGV+ DT    H  ++     +   G+++D   Y E LK G  +E +     
Sbjct: 1   YKAVIFDMDGVITDTAP-LHAQAWKHIAAK--YGISFDKQ-YNESLK-GLSREDILRAIL 55

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           K           EE  Q    L +RK EL+  L+    + + PG+  L+ +   KG+ V 
Sbjct: 56  K---LRGDGLSLEEIHQ----LAERKNELYRELLRLTGVAVLPGIRNLLKRLKAKGIAVG 108

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDP 237
           + S+S           +L   +      F        V   KP P
Sbjct: 109 LGSSS------KNAPRIL--AKLGLRDYFDAIVDASEVKNGKPHP 145

This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 59.2 bits (143), Expect = 7e-11
 Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 16/163 (9%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYGELLKIGGGKERMTAYFN 136
           A++FD DG L D E     +   +   E    LGV   V   GE L   G +E +     
Sbjct: 3   AVVFDLDGTLTDGE---PVVPEAEALLEAAAALGVAI-VIAAGENLTKEGREELV----R 54

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           +      A  +  E      +      +L ++ +     PL PG  + + +  E G+K+A
Sbjct: 55  RLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLA 114

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPRKKPDP 237
           + +  N     AI   L   +      + A     V   KPDP
Sbjct: 115 ILTGDNRLTANAIARLLGLFDAL----VSADLYGLVGVGKPDP 153

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 22/158 (13%)

Query: 80  LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
           ++FD DG L+D +      +  D   E  LG+    +   E     GG     A      
Sbjct: 1   IIFDLDGTLIDFD-PVIFEALRDLAAE-RLGLDISAEELREA----GGLPFDEAL---AD 51

Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
              + P D +E             E  +    +  L   P V +L+ +   KGVK+ + S
Sbjct: 52  LLREHPIDPDE-----------ILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILS 100

Query: 200 TSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             + +AV  ++  L   +  +   +F  D V  +KPDP
Sbjct: 101 NGSREAVERLLEKLGLLDLFD--AVFTSDDVGARKPDP 136

Length = 176

>gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 35/169 (20%)

Query: 79  ALLFDCDGVLVDTEK----DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY 134
           A++FD DGV+ DT +        ++        ELG+ +D +   E LK    +E +   
Sbjct: 1   AVIFDLDGVITDTAEYHYLAWKHLA-------DELGIPFDEEF-NESLKGVSREESLERI 52

Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP--LRPGVAKLIDQALEKG 192
            +  G        EEE+++    L +RK + ++ L+ K+L P  + PG+  L+    +  
Sbjct: 53  LDLGG----KKYSEEEKEE----LAERKNDYYVELL-KELTPADVLPGIKSLLADLKKNN 103

Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK----KPDP 237
           +K+A+ S S           +L  E+ E I  F   V P +    KPDP
Sbjct: 104 IKIALASASKN------APTIL--EKLELIDYFDAIVDPAELKKGKPDP 144

This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185

>gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 33/141 (23%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLY------GELLKIGGGKERM 131
           SA+LFD DGVL ++E +  R +  D F   E+GV   V+ +      GE   +GG     
Sbjct: 76  SAVLFDMDGVLCNSE-EPSRRAAVDVF--AEMGVEVTVEDFVPFMGTGEANFLGG----- 127

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLR----PGVAKLIDQ 187
               +  G     P   ++R              F + +EK   P      PG  +LI Q
Sbjct: 128 --VASVKGVKGFDPDAAKKR-------------FFEIYLEKYAKPNSGIGFPGALELITQ 172

Query: 188 ALEKGVKVAVCSTSNEKAVTA 208
              KG+KVAV S+++   V A
Sbjct: 173 CKNKGLKVAVASSADRIKVDA 193

Length = 1057

>gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 37/174 (21%), Positives = 58/174 (33%), Gaps = 42/174 (24%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-------TWDVDLYGELLKIGGGKERM 131
           A+ FD DG LVD+  D    + N       L         TW          +G G + +
Sbjct: 8   AVAFDLDGTLVDSAPDLAA-AVNAALAALGLPPAGEERVRTW----------VGNGADVL 56

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKR-------KTELFMVLIEKKLLPLRPGVAKL 184
                   W  + P DEE  ++      +         + L+            PGV + 
Sbjct: 57  VE--RALTWAGREP-DEELLEKLRELFDRHYAENVAGGSRLY------------PGVKET 101

Query: 185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
           +      G  +AV +      V  ++  L   +      +  GD +P KKPDP 
Sbjct: 102 LAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS--VVIGGDSLPNKKPDPA 153

Length = 226

>gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 32/160 (20%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DG LVD  K   R +F  TF+E       +   +  L  + G  E +       
Sbjct: 1   AILFDIDGTLVDI-KFAIRRAFAQTFEE----FGLNPAAFKRLKALRGLAEEL------- 48

Query: 139 GWPEKAPS-DEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
                A    EE +        +                  PG A L+ +  E G+K+ +
Sbjct: 49  -LWRIATEALEELQGHIGYDAEE---------------AYIPGAADLLPRLKEAGIKLGI 92

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            S  + +A   ++      +     ++  G      KP+P
Sbjct: 93  ISNGSLRAQKLLLRKHGLGDY---FELILGSDEIGSKPEP 129

This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	241
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.9
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.88
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.87
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.87
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.87
PRK13288	214	pyrophosphatase PpaX; Provisional	99.86
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.86
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.86
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.85
PLN02575	381	haloacid dehalogenase-like hydrolase	99.85
COG0546	220	Gph Predicted phosphatases [General function predi	99.85
PRK11587	218	putative phosphatase; Provisional	99.84
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.84
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.84
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.84
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.82
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.82
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.81
PLN02940	382	riboflavin kinase	99.81
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.8
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.8
PRK09449	224	dUMP phosphatase; Provisional	99.8
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.8
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.8
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.79
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.78
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.77
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.77
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.77
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.76
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.75
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.74
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.74
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.73
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.73
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.72
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.7
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.69
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.68
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.66
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.64
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.62
PLN02811	220	hydrolase	99.6
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.56
PHA02597	197	30.2 hypothetical protein; Provisional	99.54
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.51
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.42
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.38
PLN02954	224	phosphoserine phosphatase	99.38
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.35
PRK11590	211	hypothetical protein; Provisional	99.29
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.25
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.23
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.19
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.19
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.17
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.16
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.11
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.08
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.07
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.07
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.03
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.03
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.02
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	98.94
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	98.93
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	98.92
PRK08238	479	hypothetical protein; Validated	98.89
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	98.89
PHA03398	303	viral phosphatase superfamily protein; Provisional	98.8
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.79
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	98.77
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.66
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	98.62
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	98.6
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	98.57
PRK06769	173	hypothetical protein; Validated	98.55
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.52
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	98.51
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	98.51
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	98.48
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	98.47
COG4359	220	Uncharacterized conserved protein [Function unknow	98.46
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	98.44
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.44
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	98.41
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.38
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	98.35
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	98.26
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.21
PHA02530	300	pseT polynucleotide kinase; Provisional	98.06
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.02
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	98.0
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	97.93
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.86
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.86
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.86
PRK01158	230	phosphoglycolate phosphatase; Provisional	97.76
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.74
PRK10513	270	sugar phosphate phosphatase; Provisional	97.67
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	97.58
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	97.58
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	97.57
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	97.56
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.56
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.54
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	97.51
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	97.5
PRK10976	266	putative hydrolase; Provisional	97.47
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	97.33
COG4229	229	Predicted enolase-phosphatase [Energy production a	97.29
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	97.28
PTZ00445	219	p36-lilke protein; Provisional	97.22
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	97.18
PTZ00174	247	phosphomannomutase; Provisional	97.11
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.09
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.99
PLN02887	580	hydrolase family protein	96.97
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	96.93
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	96.85
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	96.84
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	96.82
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	96.81
PLN02645	311	phosphoglycolate phosphatase	96.69
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	96.56
PLN02177	497	glycerol-3-phosphate acyltransferase	96.54
PLN02645	311	phosphoglycolate phosphatase	96.45
COG4996	164	Predicted phosphatase [General function prediction	96.26
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	96.24
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	96.23
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	96.23
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	96.09
COG2503	274	Predicted secreted acid phosphatase [General funct	96.06
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	95.93
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	95.93
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	95.76
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	95.72
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	95.56
COG0241	181	HisB Histidinol phosphatase and related phosphatas	95.47
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	95.04
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	94.98
PRK10444	248	UMP phosphatase; Provisional	94.86
PLN02499	498	glycerol-3-phosphate acyltransferase	94.85
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	94.69
PLN02423	245	phosphomannomutase	94.66
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	94.04
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	93.83
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	93.52
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	93.48
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	93.26
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	93.21
PRK10671	834	copA copper exporting ATPase; Provisional	93.12
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	93.07
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	92.99
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	92.95
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	92.93
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	92.68
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	92.65
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	92.59
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	92.48
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	92.46
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	92.17
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	92.13
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	92.11
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	92.08
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	92.02
PRK14010	673	potassium-transporting ATPase subunit B; Provision	91.96
PRK01122	679	potassium-transporting ATPase subunit B; Provision	91.84
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	91.55
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	91.48
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	91.37
PRK10444	248	UMP phosphatase; Provisional	90.86
COG0731	296	Fe-S oxidoreductases [Energy production and conver	90.65
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	90.56
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	90.34
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	90.16
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	89.98
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	89.96
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	89.81
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	89.78
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	89.4
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	89.23
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	88.62
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	88.39
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	88.36
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	88.28
PRK13762	322	tRNA-modifying enzyme; Provisional	88.24
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	88.19
KOG4549	144	consensus Magnesium-dependent phosphatase [General	88.09
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	88.03
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	87.81
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	87.49
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	87.19
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	86.96
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	86.42
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	86.13
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	86.04
PRK15122	903	magnesium-transporting ATPase; Provisional	85.79
PRK06769	173	hypothetical protein; Validated	85.72
KOG2116	738	consensus Protein involved in plasmid maintenance/	85.42
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	85.31
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	85.06
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	84.93
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	84.7
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	84.53
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	84.32
COG4030	315	Uncharacterized protein conserved in archaea [Func	84.21
smart00540	44	LEM in nuclear membrane-associated proteins. LEM,	84.11
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	84.06
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	84.0
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	83.34
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	82.97
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	82.24
COG5663	194	Uncharacterized conserved protein [Function unknow	81.21
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	80.92
TIGR02495	191	NrdG2 anaerobic ribonucleoside-triphosphate reduct	80.52
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	80.01

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.90  E-value=5.9e-23  Score=174.04  Aligned_cols=165  Identities=70%  Similarity=1.141  Sum_probs=122.6

Q ss_pred             CCCcEEEEecCcccccCc-cchHHHHHHHHHHhhcC-CCCCCHHHHHHHHHhCCchHHHHHHHHhcCCC----CCCCCCH
Q 026252           75 VLPSALLFDCDGVLVDTE-KDGHRISFNDTFKEKEL-GVTWDVDLYGELLKIGGGKERMTAYFNKTGWP----EKAPSDE  148 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~-~~~~~~a~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  148 (241)
                      ..+++|||||||||+|+. .. +..+|+++++++|. ...++.+.+..+...+.+...+..++...+|+    ...+..+
T Consensus        38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (286)
T PLN02779         38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDE  116 (286)
T ss_pred             cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCccc
Confidence            457999999999999999 75 88899999999998 43455555544434666666666666555554    2122234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecC
Q 026252          149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      +..++..+.+...+.+.|...+....++++||+.++|+.|+++|++++|+||+....+..+++.+++..+|+...+++++
T Consensus       117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~  196 (286)
T PLN02779        117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGD  196 (286)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecc
Confidence            44455566666666677777665554689999999999999999999999999999999999877544555422355888


Q ss_pred             CCCCCCCCCCCC
Q 026252          229 VVPRKKPDPLCC  240 (241)
Q Consensus       229 ~~~~~KP~p~~f  240 (241)
                      +++..||+|++|
T Consensus       197 ~~~~~KP~p~~~  208 (286)
T PLN02779        197 DVPKKKPDPDIY  208 (286)
T ss_pred             ccCCCCCCHHHH
Confidence            888999999876

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.88  E-value=1.2e-21  Score=162.89  Aligned_cols=149  Identities=23%  Similarity=0.295  Sum_probs=109.5

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCC--CCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG--VTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK  152 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (241)
                      .++++|||||||||+|+... +..+|+++++++|..  .+...+.+... ..|.........+...        ..+...
T Consensus        20 ~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~-~~G~~~~~~~~~~~~~--------~~~~~~   89 (248)
T PLN02770         20 APLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVEN-IAGKHNEDIALGLFPD--------DLERGL   89 (248)
T ss_pred             CccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHH-cCCCCHHHHHHHHcCc--------chhhHH
Confidence            56899999999999999985 888999999999764  23334433222 2455555544332211        111111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                          ++...+.+.|...... ...++||+.++|+.|+++|++++|+||+.+..++..++++++.++|+  .++++++++.
T Consensus        90 ----~~~~~~~~~y~~~~~~-~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd--~iv~~~~~~~  162 (248)
T PLN02770         90 ----KFTDDKEALFRKLASE-QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ--AVIIGSECEH  162 (248)
T ss_pred             ----HHHHHHHHHHHHHHHh-cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc--EEEecCcCCC
Confidence                1222333444443332 37899999999999999999999999999999999999999999999  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       163 ~KP~p~~~  170 (248)
T PLN02770        163 AKPHPDPY  170 (248)
T ss_pred             CCCChHHH
Confidence            99999886

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.87  E-value=1e-21  Score=160.58  Aligned_cols=147  Identities=29%  Similarity=0.413  Sum_probs=106.4

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  154 (241)
                      ++++|||||||||+|+++. +..+|.++++++|...+  .+.....  .|.........+. ..+...  .......+..
T Consensus         1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   73 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIEIS--DEEIREL--HGGGIARIIDLLRKLAAGED--PADLAELERL   73 (221)
T ss_pred             CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCCCC--HHHHHHH--HCCChHHHHHHHHHHhcCCc--ccCHHHHHHH
Confidence            4799999999999999995 99999999999988754  3444443  4444333333322 221100  0011111111


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ..       +.+.  .......+.||+.++|+.|+++|+++++.||+.+..+...|+.+|+.++|+  .+++++++...|
T Consensus        74 ~~-------~~~~--~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~--~~v~~~dv~~~K  142 (221)
T COG0637          74 LY-------EAEA--LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD--VIVTADDVARGK  142 (221)
T ss_pred             HH-------HHHH--hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc--hhccHHHHhcCC
Confidence            11       1111  122347999999999999999999999999999999999999999999999  789999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       143 P~Pd~y  148 (221)
T COG0637         143 PAPDIY  148 (221)
T ss_pred             CCCHHH
Confidence            999998

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.87  E-value=2.3e-21  Score=162.05  Aligned_cols=150  Identities=19%  Similarity=0.210  Sum_probs=111.0

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      ..+|+|||||||||+|+....+..+|+++++++|..... .+.....  .|.+.......+....      ...+..+++
T Consensus        22 ~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~-~e~~~~~--~G~~~~~~~~~l~~~~------~~~~~~~~l   92 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP-AFLLKRA--EGMKNEQAISEVLCWS------RDFLQMKRL   92 (260)
T ss_pred             CCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH-HHHHHHh--cCCCHHHHHHHHhccC------CCHHHHHHH
Confidence            458999999999999997544677999999999886542 2233333  6777666655543211      122222222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .    ..+.+.+. ........++||+.++|+.|+++|++++|+||+....+..+++++|+..+|+  .++++++++..|
T Consensus        93 ~----~~~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd--~ii~~~d~~~~K  165 (260)
T PLN03243         93 A----IRKEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS--VVLAAEDVYRGK  165 (260)
T ss_pred             H----HHHHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc--EEEecccCCCCC
Confidence            2    22233332 2233347899999999999999999999999999999999999999999999  899999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       166 P~Pe~~  171 (260)
T PLN03243        166 PDPEMF  171 (260)
T ss_pred             CCHHHH
Confidence            999887

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.87  E-value=3.2e-21  Score=158.56  Aligned_cols=148  Identities=22%  Similarity=0.310  Sum_probs=109.7

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      .|+++|||||||||+|+.+. +..+|+.+++++|... ++.+.+...  .|.+..........       .......++.
T Consensus        10 ~~~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~-~~~~~~~~~--~g~~~~~~~~~~~~-------~~~~~~~~~~   78 (229)
T PRK13226         10 RFPRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP-ITLAQLRPV--VSKGARAMLAVAFP-------ELDAAARDAL   78 (229)
T ss_pred             ccCCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hhhHHHHHHHHHhc-------cCChHHHHHH
Confidence            45799999999999999995 8889999999998863 344555443  44444444333211       1123333444


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+..    .|.+.... ..+++||+.++|+.|+++|++++|+||+....+...++.+++..+|+  .++++++++..|
T Consensus        79 ~~~~~~----~~~~~~~~-~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~K  151 (229)
T PRK13226         79 IPEFLQ----RYEALIGT-QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA--VLIGGDTLAERK  151 (229)
T ss_pred             HHHHHH----HHHHhhhh-cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc--EEEecCcCCCCC
Confidence            444333    33332222 36899999999999999999999999999999999999999999998  788888888999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       152 P~p~~~  157 (229)
T PRK13226        152 PHPLPL  157 (229)
T ss_pred             CCHHHH
Confidence            999876

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.86  E-value=9.3e-21  Score=154.13  Aligned_cols=144  Identities=21%  Similarity=0.208  Sum_probs=106.6

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++++||||+||||+|+... +..+|++++++++... ...+.+...  .|.+.......+           .+...+++
T Consensus         1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~~-~~~~~~~~~--~G~~~~~~~~~~-----------~~~~~~~~   65 (214)
T PRK13288          1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPNQ-YKREDVLPF--IGPSLHDTFSKI-----------DESKVEEM   65 (214)
T ss_pred             CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCCC-CCHHHHHHH--hCcCHHHHHHhc-----------CHHHHHHH
Confidence            35899999999999999985 8889999999987643 234444443  455544333221           12222333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ...+.    +.+..... ....++||+.++|+.|+++|++++|+||+.+..+...++.+|+..+|+  .++++++++..|
T Consensus        66 ~~~~~----~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~K  138 (214)
T PRK13288         66 ITTYR----EFNHEHHD-ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD--VVITLDDVEHAK  138 (214)
T ss_pred             HHHHH----HHHHHhhh-hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee--EEEecCcCCCCC
Confidence            33222    22222222 236899999999999999999999999999999999999999999999  899999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       139 p~p~~~  144 (214)
T PRK13288        139 PDPEPV  144 (214)
T ss_pred             CCcHHH
Confidence            999876

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.86  E-value=1e-20  Score=154.47  Aligned_cols=148  Identities=17%  Similarity=0.166  Sum_probs=111.4

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  155 (241)
                      +|+||||+||||+|+.+. +..+|+++++++|....  .+++... ..|.....+.+.+. ..+.      ..+..+++.
T Consensus         1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~------~~~~~~~~~   70 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLSPT--PEEVQSA-WMGQSKIEAIRALLALDGA------DEAEAQAAF   70 (220)
T ss_pred             CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCCCC--HHHHHHh-hcCCCHHHHHHHHHhccCC------CHHHHHHHH
Confidence            589999999999999995 88999999999887643  3444432 25666666555433 2222      223333333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC--CCcccceEEecCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~--~~f~~~~iv~s~~~~~~  233 (241)
                      ..+    .+.+.+.+.....+++||+.++|+.|+++|++++|+||+....+...++.+++.  .+|+  .++++++++..
T Consensus        71 ~~~----~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~--~i~~~~~~~~~  144 (220)
T TIGR03351        71 ADF----EERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD--AVVCPSDVAAG  144 (220)
T ss_pred             HHH----HHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC--EEEcCCcCCCC
Confidence            333    333433334344689999999999999999999999999999999999999988  8998  89999999999


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       145 KP~p~~~  151 (220)
T TIGR03351       145 RPAPDLI  151 (220)
T ss_pred             CCCHHHH
Confidence            9999876

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.86  E-value=2.3e-20  Score=156.89  Aligned_cols=152  Identities=18%  Similarity=0.265  Sum_probs=105.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-----------HhcCCCC
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-----------NKTGWPE  142 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  142 (241)
                      |+++|+||||+||||+|+....+..+|+++++++|.+.  +.+.+...  .|.+.......+           ...+.  
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~g~--   74 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEI--TLEEARGP--MGLGKWDHIRALLKMPRVAARWQAVFGR--   74 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCC--CHHHHHHh--cCCCHHHHHHHHHhcHHHHHHHHHHhCC--
Confidence            46789999999999999975334679999999998753  33444333  444433222111           11111  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc-cc
Q 026252          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EK  221 (241)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f-~~  221 (241)
                        ....+..+++...+.    +.+.+.... ...++||+.++|+.|+++|++++|+||+.+..+..+++.+++..+| + 
T Consensus        75 --~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d-  146 (267)
T PRK13478         75 --LPTEADVDALYAAFE----PLQIAKLAD-YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPD-  146 (267)
T ss_pred             --CCCHHHHHHHHHHHH----HHHHHHHhh-cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCce-
Confidence              112333333333333    333332322 3689999999999999999999999999999999999998888875 5 


Q ss_pred             ceEEecCCCCCCCCCCCCC
Q 026252          222 IQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       222 ~~iv~s~~~~~~KP~p~~f  240 (241)
                       .++++++++..||+|++|
T Consensus       147 -~i~~~~~~~~~KP~p~~~  164 (267)
T PRK13478        147 -HVVTTDDVPAGRPYPWMA  164 (267)
T ss_pred             -EEEcCCcCCCCCCChHHH
Confidence             789999999999999876

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.85  E-value=2.3e-20  Score=155.59  Aligned_cols=149  Identities=18%  Similarity=0.234  Sum_probs=104.8

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-----------HhcCCCCCCC
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-----------NKTGWPEKAP  145 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~  145 (241)
                      +++||||+||||+|+....+..+|++++.++|...  ..+.+...  .|.+.......+           ...+.    .
T Consensus         2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~   73 (253)
T TIGR01422         2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQI--TLEEARGP--MGLGKWDHIRALLKMPAVAERWRAKFGR----L   73 (253)
T ss_pred             ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCc--cHHHHHHh--cCccHHHHHHHHhcCHHHHHHHHHHhCC----C
Confidence            68999999999999975335679999999988753  34444433  444433222211           11121    1


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc-ccceE
Q 026252          146 SDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQI  224 (241)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f-~~~~i  224 (241)
                      ...+..+++.+.+    .+.+.+.... ...++||+.++|+.|+++|++++|+||+....++.+++.+|+..+| +  .|
T Consensus        74 ~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d--~i  146 (253)
T TIGR01422        74 PTEADIEAIYEAF----EPLQLAKLAE-YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPD--YN  146 (253)
T ss_pred             CCHHHHHHHHHHH----HHHHHHHHHh-cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCc--eE
Confidence            1223333333333    3333333322 3789999999999999999999999999999999999999999986 6  78


Q ss_pred             EecCCCCCCCCCCCCC
Q 026252          225 FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       225 v~s~~~~~~KP~p~~f  240 (241)
                      +++++++..||+|++|
T Consensus       147 i~~~~~~~~KP~p~~~  162 (253)
T TIGR01422       147 VTTDDVPAGRPAPWMA  162 (253)
T ss_pred             EccccCCCCCCCHHHH
Confidence            9999999999999886

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.85  E-value=1.6e-20  Score=162.97  Aligned_cols=149  Identities=19%  Similarity=0.216  Sum_probs=113.3

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      ..++|||||||||+|+.+..+..+|+++++++|.... ..+....+  .|.+.......+....      ......+   
T Consensus       130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~-~~e~~~~~--~G~~~~~~l~~ll~~~------~~~~~~e---  197 (381)
T PLN02575        130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPP-PAFILRRV--EGMKNEQAISEVLCWS------RDPAELR---  197 (381)
T ss_pred             CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCC-HHHHHHHh--cCCCHHHHHHHHhhcc------CCHHHHH---
Confidence            6899999999999999875466799999999988643 23333443  6777666655443221      1222333   


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP  235 (241)
                       ++...+.+.|.+... ....++||+.++|+.|+++|++++|+||+.+..++.+++.+|+..||+  .|+++++++..||
T Consensus       198 -~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd--~Iv~sddv~~~KP  273 (381)
T PLN02575        198 -RMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS--VIVAAEDVYRGKP  273 (381)
T ss_pred             -HHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce--EEEecCcCCCCCC
Confidence             333334444544333 336899999999999999999999999999999999999999999999  8999999999999


Q ss_pred             CCCCC
Q 026252          236 DPLCC  240 (241)
Q Consensus       236 ~p~~f  240 (241)
                      +|++|
T Consensus       274 ~Peif  278 (381)
T PLN02575        274 DPEMF  278 (381)
T ss_pred             CHHHH
Confidence            99987

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.85  E-value=5.2e-20  Score=150.49  Aligned_cols=149  Identities=28%  Similarity=0.409  Sum_probs=113.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      +++++|+||+||||+|+... +..+++.+++++|.+. ...+.....  .|.+............       ..+...+.
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--ig~~~~~~~~~~~~~~-------~~~~~~~~   70 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP-LDEEEIRQL--IGLGLDELIERLLGEA-------DEEAAAEL   70 (220)
T ss_pred             CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC-CCHHHHHHH--hcCCHHHHHHHHhccc-------cchhHHHH
Confidence            57899999999999999996 7789999999999884 344555554  6677666655433221       11111133


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+...+.+.+.+..   ...++||+.++|+.|+++|++++|+||..+..++.+++.+|+.++|+  .++++++....|
T Consensus        71 ~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~~~~K  145 (220)
T COG0546          71 VERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDVPPPK  145 (220)
T ss_pred             HHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCCCCCC
Confidence            4444444444443322   25799999999999999999999999999999999999999999999  788878889999


Q ss_pred             CCCCC
Q 026252          235 PDPLC  239 (241)
Q Consensus       235 P~p~~  239 (241)
                      |+|+.
T Consensus       146 P~P~~  150 (220)
T COG0546         146 PDPEP  150 (220)
T ss_pred             cCHHH
Confidence            99975

>PRK11587 putative phosphatase; Provisional

Probab=99.84  E-value=3.2e-20  Score=151.50  Aligned_cols=144  Identities=19%  Similarity=0.199  Sum_probs=100.6

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++++|||||||||+|+.+. +..+|+++++++|.+.    .++... ..|.......+.+.. +      ...+..   
T Consensus         1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~----~~~~~~-~~g~~~~~~~~~~~~-~------~~~~~~---   64 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP----DEVLNF-IHGKQAITSLRHFMA-G------ASEAEI---   64 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH----HHHHHH-HcCCCHHHHHHHHhc-c------CCcHHH---
Confidence            35899999999999999985 8889999999998752    233222 246555554444321 1      112221   


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+.. . ..+.... .....++||+.++|+.|+++|++++|+||+....+...++..++ .+|+  .++++++++..|
T Consensus        65 ~~~~~~-~-~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~--~i~~~~~~~~~K  138 (218)
T PRK11587         65 QAEFTR-L-EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPE--VFVTAERVKRGK  138 (218)
T ss_pred             HHHHHH-H-HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCcc--EEEEHHHhcCCC
Confidence            122211 1 1111111 23478999999999999999999999999988888888888876 5566  688888888999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       139 P~p~~~  144 (218)
T PRK11587        139 PEPDAY  144 (218)
T ss_pred             CCcHHH
Confidence            999876

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.84  E-value=3.5e-20  Score=150.35  Aligned_cols=146  Identities=21%  Similarity=0.278  Sum_probs=107.1

Q ss_pred             EEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHHHHH
Q 026252           80 LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFIASL  158 (241)
Q Consensus        80 ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  158 (241)
                      ||||+||||+|+.+. +..+|+.+++++|... .+.+.+...  .|.+.......+. ..+.    ....+..    +++
T Consensus         1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~----~~~   68 (213)
T TIGR01449         1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP-ATLARVIGF--IGNGVPVLMERVLAWAGQ----EPDAQRV----AEL   68 (213)
T ss_pred             CeecCCCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hcccHHHHHHHHhhcccc----ccChHHH----HHH
Confidence            689999999999985 7779999999988753 344555443  4555544444332 2221    1122222    333


Q ss_pred             HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCC
Q 026252          159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                      ...+.+.|.+.... ...++||+.++|+.|+++|++++|+||+....++..++++|+..+|+  .++++++++..||+|+
T Consensus        69 ~~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~p~  145 (213)
T TIGR01449        69 RKLFDRHYEEVAGE-LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS--VLIGGDSLAQRKPHPD  145 (213)
T ss_pred             HHHHHHHHHHhccc-cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc--EEEecCCCCCCCCChH
Confidence            33344444443322 36899999999999999999999999999999999999999999998  7899999999999998


Q ss_pred             CC
Q 026252          239 CC  240 (241)
Q Consensus       239 ~f  240 (241)
                      +|
T Consensus       146 ~~  147 (213)
T TIGR01449       146 PL  147 (213)
T ss_pred             HH
Confidence            76

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.84  E-value=4.1e-20  Score=146.67  Aligned_cols=147  Identities=25%  Similarity=0.298  Sum_probs=106.4

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  155 (241)
                      +++|+||+||||+|+.+. +..+|+++++++|.+.  +. .+... ..|.........+. ..+.    ....+..+++ 
T Consensus         1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~--~~-~~~~~-~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~-   70 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIEF--DK-QYNTS-LGGLSREDILRAILKLRKP----GLSLETIHQL-   70 (185)
T ss_pred             CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCCC--CH-HHHHH-cCCCCHHHHHHHHHHhcCC----CCCHHHHHHH-
Confidence            589999999999999985 8889999999998763  32 22222 24555555444333 2211    1233333333 


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP  235 (241)
                         ...+.+.|.+..+.....++||+.++|+.|+++|++++++||+  ..++.+++.+++..+|+  .++++++++..||
T Consensus        71 ---~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~--~v~~~~~~~~~kp  143 (185)
T TIGR02009        71 ---AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD--AIVDADEVKEGKP  143 (185)
T ss_pred             ---HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC--EeeehhhCCCCCC
Confidence               3333344444443344789999999999999999999999998  66889999999999998  7999999999999


Q ss_pred             CCCCC
Q 026252          236 DPLCC  240 (241)
Q Consensus       236 ~p~~f  240 (241)
                      +|++|
T Consensus       144 ~~~~~  148 (185)
T TIGR02009       144 HPETF  148 (185)
T ss_pred             ChHHH
Confidence            99876

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.84  E-value=6.1e-20  Score=150.18  Aligned_cols=149  Identities=20%  Similarity=0.343  Sum_probs=107.5

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHh-cCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK-TGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  153 (241)
                      .++++|+||+||||+|+.+. +..++.++++++|..... .+.+...  .|.........+.. .+|.      ....++
T Consensus         5 ~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~------~~~~~~   74 (222)
T PRK10826          5 RQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISR-REELPDT--LGLRIDQVVDLWYARQPWN------GPSRQE   74 (222)
T ss_pred             ccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCCCH-HHHHHHh--hCCCHHHHHHHHHHhcCCC------CCCHHH
Confidence            46899999999999999985 778999999999876432 1333332  45555444443322 2221      111122


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      ..+.+.+.    +.+... ....++||+.++|+.|+++|++++|+||+....++.+++.+++.++|+  .++++++++..
T Consensus        75 ~~~~~~~~----~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  147 (222)
T PRK10826         75 VVQRIIAR----VISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKLPYS  147 (222)
T ss_pred             HHHHHHHH----HHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccCCCC
Confidence            22222222    222222 236899999999999999999999999999999999999999999999  78999999999


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       148 Kp~~~~~  154 (222)
T PRK10826        148 KPHPEVY  154 (222)
T ss_pred             CCCHHHH
Confidence            9999876

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.82  E-value=1.2e-19  Score=144.51  Aligned_cols=146  Identities=21%  Similarity=0.226  Sum_probs=103.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHh-cCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK-TGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  152 (241)
                      |.++++||||+||||+|+.+. +..+|+++++++|...  +.+.....  .|.........+.. .+.    ....+   
T Consensus         2 ~~~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~---   69 (188)
T PRK10725          2 YDRYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQF--DEQAMVAL--NGSPTWRIAQAIIELNQA----DLDPH---   69 (188)
T ss_pred             CCcceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCC--CHHHHHHh--cCCCHHHHHHHHHHHhCC----CCCHH---
Confidence            356899999999999999995 8889999999998753  33444332  55555444343322 221    11111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      ++..    .+.+++..... ....++|| .++|+.|+++ ++++|+||+.+..++..++.+++.+||+  .|+++++++.
T Consensus        70 ~~~~----~~~~~~~~~~~-~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd--~i~~~~~~~~  140 (188)
T PRK10725         70 ALAR----EKTEAVKSMLL-DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD--AVVAADDVQH  140 (188)
T ss_pred             HHHH----HHHHHHHHHHh-ccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce--EEEehhhccC
Confidence            1111    12222322222 23577887 5999999875 8999999999999999999999999999  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       141 ~KP~p~~~  148 (188)
T PRK10725        141 HKPAPDTF  148 (188)
T ss_pred             CCCChHHH
Confidence            99999886

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.82  E-value=2.9e-19  Score=141.78  Aligned_cols=145  Identities=23%  Similarity=0.372  Sum_probs=103.9

Q ss_pred             EEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHH-HHhcCCCCCCCCCHHHHHHHHHH
Q 026252           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFIAS  157 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  157 (241)
                      +||||+||||+|+.+. +..+|+++++++|++.  ..+.....  .+.+....... +...++    +..++..+++.+.
T Consensus         1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~   71 (185)
T TIGR01990         1 AVIFDLDGVITDTAEY-HYLAWKALADELGIPF--DEEFNESL--KGVSREDSLERILDLGGK----KYSEEEKEELAER   71 (185)
T ss_pred             CeEEcCCCccccChHH-HHHHHHHHHHHcCCCC--CHHHHHHh--cCCChHHHHHHHHHhcCC----CCCHHHHHHHHHH
Confidence            5899999999999995 8889999999998863  33433333  45555554443 333333    2233444444443


Q ss_pred             HHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCC
Q 026252          158 LHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD  236 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~-~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~  236 (241)
                      +..    .|.+.... ....++||+.++|+.|+++|++++|+||+..  ....++++++..+|+  .++++++++..||+
T Consensus        72 ~~~----~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~  143 (185)
T TIGR01990        72 KND----YYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD--AIVDPAEIKKGKPD  143 (185)
T ss_pred             HHH----HHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc--EEEehhhcCCCCCC
Confidence            333    33333222 2247899999999999999999999999753  467899999999999  78999999999999


Q ss_pred             CCCC
Q 026252          237 PLCC  240 (241)
Q Consensus       237 p~~f  240 (241)
                      |++|
T Consensus       144 p~~~  147 (185)
T TIGR01990       144 PEIF  147 (185)
T ss_pred             hHHH
Confidence            9876

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.81  E-value=3e-19  Score=145.74  Aligned_cols=64  Identities=16%  Similarity=0.174  Sum_probs=60.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+  .++++++++..||+|++|
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~~~  156 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD--AVITSEEEGVEKPHPKIF  156 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc--EEEEeccCCCCCCCHHHH
Confidence            6899999999999999999999999999899999999999999998  799999999999999876

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN02940 riboflavin kinase

Probab=99.81  E-value=3.3e-19  Score=156.69  Aligned_cols=146  Identities=23%  Similarity=0.289  Sum_probs=107.8

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHH-HHhcCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  153 (241)
                      ..+++||||+||||+|+... +..+|+.+++++|..  ++.+.+...  .|......... +...+.+    ..   .++
T Consensus         9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~--~~~~~~~~~--~G~~~~~~~~~~~~~~~~~----~~---~~~   76 (382)
T PLN02940          9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ--WDGREAQKI--VGKTPLEAAATVVEDYGLP----CS---TDE   76 (382)
T ss_pred             ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC--CCHHHHHHh--cCCCHHHHHHHHHHHhCCC----CC---HHH
Confidence            45899999999999999995 888999999999865  334444443  56555554433 3333321    11   222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHH-HhcCCCCcccceEEecCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVS-FLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~-~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      +...+.+    .+.+.+.  ...++||+.++|+.|+++|++++|+||+.+..+...++ .+++.++|+  .++++++++.
T Consensus        77 ~~~~~~~----~~~~~~~--~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd--~ii~~d~v~~  148 (382)
T PLN02940         77 FNSEITP----LLSEQWC--NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS--VIVGGDEVEK  148 (382)
T ss_pred             HHHHHHH----HHHHHHc--cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC--EEEehhhcCC
Confidence            2222222    2222222  26899999999999999999999999999999998887 678889999  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       149 ~KP~p~~~  156 (382)
T PLN02940        149 GKPSPDIF  156 (382)
T ss_pred             CCCCHHHH
Confidence            99999886

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.80  E-value=8.5e-19  Score=147.70  Aligned_cols=153  Identities=24%  Similarity=0.326  Sum_probs=108.2

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      .++|+|||||||||+|+.+. +..+++++++++|.... ..+.+...  .+.+...+...+....+. .....+...+++
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~   85 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPPA-GLEAVRHW--VGNGAPVLVRRALAGSID-HDGVDDELAEQA   85 (272)
T ss_pred             ccCCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hChhHHHHHHHHhccccc-ccCCCHHHHHHH
Confidence            46899999999999999996 88899999999998643 23433332  555554443332211010 011122333333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+    .+.|....  ....++||+.++|+.|+++|++++|+||+....++.+++.+++..+|+  .++++++++..|
T Consensus        86 ~~~~----~~~~~~~~--~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~--~i~~~d~~~~~K  157 (272)
T PRK13223         86 LALF----MEAYADSH--ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR--WIIGGDTLPQKK  157 (272)
T ss_pred             HHHH----HHHHHhcC--cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe--EEEecCCCCCCC
Confidence            3332    33332211  225789999999999999999999999999999999999999989998  789999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       158 p~p~~~  163 (272)
T PRK13223        158 PDPAAL  163 (272)
T ss_pred             CCcHHH
Confidence            999875

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.80  E-value=5e-19  Score=144.58  Aligned_cols=146  Identities=20%  Similarity=0.232  Sum_probs=103.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  153 (241)
                      +++++|+||+||||+|+.+. +..+|.+++.++|....  .+++... ..+.....+...+. ..+.+    ...   ++
T Consensus         2 ~~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~~----~~~---~~   70 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGITLS--LEEVFKR-FKGVKLYEIIDIISKEHGVT----LAK---AE   70 (221)
T ss_pred             CCCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCCCC--HHHHHHH-hcCCCHHHHHHHHHHHhCCC----CCH---HH
Confidence            46899999999999999985 77899999999987643  3333322 24555555544433 33322    112   22


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      +...+.....+.+     .....++||+.++|+.|   +++++|+||+....+...++.+++.++|+. .++++++++..
T Consensus        71 ~~~~~~~~~~~~~-----~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~~~  141 (221)
T PRK10563         71 LEPVYRAEVARLF-----DSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQRW  141 (221)
T ss_pred             HHHHHHHHHHHHH-----HccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcCCC
Confidence            2222222222211     12378999999999999   489999999999999999999999999963 57788888999


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       142 KP~p~~~  148 (221)
T PRK10563        142 KPDPALM  148 (221)
T ss_pred             CCChHHH
Confidence            9999987

>PRK09449 dUMP phosphatase; Provisional

Probab=99.80  E-value=1.2e-18  Score=142.63  Aligned_cols=147  Identities=12%  Similarity=0.135  Sum_probs=97.4

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHH----
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER----  151 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  151 (241)
                      ++|+|+||+||||+|+.   ...+++++++.+|...  ..+.+..+...+.  . ....+....      ....+.    
T Consensus         2 ~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~--~-~~~~~~~~~------~~~~~~~~~~   67 (224)
T PRK09449          2 KYDWILFDADETLFHFD---AFAGLQRMFSRYGVDF--TAEDFQDYQAVNK--P-LWVDYQNGA------ITALQLQHTR   67 (224)
T ss_pred             CccEEEEcCCCchhcch---hhHHHHHHHHHhCCCC--cHHHHHHHHHHHH--H-HHHHHHcCC------CCHHHHHHHH
Confidence            58999999999999854   3457889999888764  2333333211111  1 111111110      111111    


Q ss_pred             -HHHHHHH---HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEec
Q 026252          152 -KQFIASL---HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       152 -~~~~~~~---~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                       +++.+.+   ...+.+.|...+... ..++||+.++|+.|+ +|++++|+||+....++..++.+|+.++|+  .++++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~v~~~  143 (224)
T PRK09449         68 FESWAEKLNVTPGELNSAFLNAMAEI-CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD--LLVIS  143 (224)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHhhc-CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC--EEEEE
Confidence             1111110   112223333333332 679999999999999 579999999999999999999999999999  89999


Q ss_pred             CCCCCCCCCCCCC
Q 026252          228 DVVPRKKPDPLCC  240 (241)
Q Consensus       228 ~~~~~~KP~p~~f  240 (241)
                      ++++..||+|++|
T Consensus       144 ~~~~~~KP~p~~~  156 (224)
T PRK09449        144 EQVGVAKPDVAIF  156 (224)
T ss_pred             CccCCCCCCHHHH
Confidence            9999999999887

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.80  E-value=9.6e-19  Score=157.63  Aligned_cols=150  Identities=21%  Similarity=0.214  Sum_probs=105.4

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCC----CCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG----VTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEE  149 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (241)
                      ++|+++|||||||||+|+.+. +..+|++++++++..    .....+.+...  .|.........+...       ...+
T Consensus       238 ~~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~~~~~l~~~-------~~~~  307 (459)
T PRK06698        238 NEMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREI--MGVPLPKVWEALLPD-------HSLE  307 (459)
T ss_pred             HHhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHH--cCCChHHHHHHHhhh-------cchh
Confidence            456899999999999999996 888999999987421    11123444443  566655554443211       1111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCC
Q 026252          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (241)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~  229 (241)
                      ..    ++....+.+.+.+.......+++||+.++|+.|+++|++++|+||+.+..++..++.+++.++|+  .++++++
T Consensus       308 ~~----~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~--~i~~~d~  381 (459)
T PRK06698        308 IR----EQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT--ETFSIEQ  381 (459)
T ss_pred             HH----HHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc--eeEecCC
Confidence            11    22222233333333333447899999999999999999999999999999999999999999999  7899988


Q ss_pred             CCCCCCCCCCC
Q 026252          230 VPRKKPDPLCC  240 (241)
Q Consensus       230 ~~~~KP~p~~f  240 (241)
                      +. .||+|++|
T Consensus       382 v~-~~~kP~~~  391 (459)
T PRK06698        382 IN-SLNKSDLV  391 (459)
T ss_pred             CC-CCCCcHHH
Confidence            64 46666654

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.80  E-value=6.6e-19  Score=142.00  Aligned_cols=145  Identities=19%  Similarity=0.262  Sum_probs=96.4

Q ss_pred             cEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHH----HHHH------------hCCchHHH-----HHHHH
Q 026252           78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYG----ELLK------------IGGGKERM-----TAYFN  136 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~----~~~~------------~~~~~~~~-----~~~~~  136 (241)
                      |+|+||+||||+|+... +..+++++++++|.+...  +++.    ..+.            .+.....+     ...+.
T Consensus         1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~   77 (203)
T TIGR02252         1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVEVSP--DELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFG   77 (203)
T ss_pred             CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCCCCH--HHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            58999999999999986 778999999999887532  2211    1110            02222111     11122


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ..+.     ...+...+..+       +++..+.......++||+.++|+.|+++|++++|+||+... +...++.+|+.
T Consensus        78 ~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~  144 (203)
T TIGR02252        78 RAGV-----PDPESFEKIFE-------ELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL  144 (203)
T ss_pred             hcCC-----CCchhHHHHHH-------HHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH
Confidence            1111     01111111111       12211111223578999999999999999999999999865 57888999999


Q ss_pred             CCcccceEEecCCCCCCCCCCCCC
Q 026252          217 ERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       217 ~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .+|+  .++++++++..||+|++|
T Consensus       145 ~~fd--~i~~s~~~~~~KP~~~~~  166 (203)
T TIGR02252       145 EYFD--FVVTSYEVGAEKPDPKIF  166 (203)
T ss_pred             Hhcc--eEEeecccCCCCCCHHHH
Confidence            9999  899999999999999876

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.79  E-value=3.1e-18  Score=140.08  Aligned_cols=151  Identities=23%  Similarity=0.274  Sum_probs=109.8

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-HhcCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  153 (241)
                      +++++|+||+||||+|+... +..+|..+++++|.... +.+.+...  .+.+...+.... ...+    .....+..++
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~--~g~~~~~~~~~~~~~~~----~~~~~~~~~~   75 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPPA-GEERVRTW--VGNGADVLVERALTWAG----REPDEELLEK   75 (226)
T ss_pred             CcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHH--hCccHHHHHHHHHhhcc----CCccHHHHHH
Confidence            56899999999999999885 77899999999887643 34444443  555554443332 2211    1123333333


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      ...    .+.+.|..... ....++||+.++|+.|+++|++++++||+....++.+++.+++..+|+  .++++++++..
T Consensus        76 ~~~----~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  148 (226)
T PRK13222         76 LRE----LFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS--VVIGGDSLPNK  148 (226)
T ss_pred             HHH----HHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc--EEEcCCCCCCC
Confidence            333    33334443322 236899999999999999999999999999999999999999988998  78999998999


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       149 kp~~~~~  155 (226)
T PRK13222        149 KPDPAPL  155 (226)
T ss_pred             CcChHHH
Confidence            9999865

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.78  E-value=1.2e-18  Score=139.98  Aligned_cols=64  Identities=22%  Similarity=0.345  Sum_probs=61.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||++...+...++.+|+..+|+  .++++++++..||+|++|
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~  154 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD--AVLSADAVRAYKPAPQVY  154 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh--eeEehhhcCCCCCCHHHH
Confidence            6899999999999999999999999999999999999999989999  899999999999999887

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.77  E-value=3e-18  Score=138.44  Aligned_cols=136  Identities=24%  Similarity=0.346  Sum_probs=99.7

Q ss_pred             EEEecCcccccCccchHHHHHHHHHHhh-cCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 026252           80 LLFDCDGVLVDTEKDGHRISFNDTFKEK-ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL  158 (241)
Q Consensus        80 ViFD~DGTLvd~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (241)
                      |||||||||+|+.+. +..+|+++++++ |.+. ...+.+...  .|.......+.   .+.+      ....++    +
T Consensus         1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~~~~~~~~~---~~~~------~~~~~~----~   63 (205)
T TIGR01454         1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDGP-APFEEYRRH--LGRYFPDIMRI---MGLP------LEMEEP----F   63 (205)
T ss_pred             CeecCcCccccCHHH-HHHHHHHHHHHhcCCCC-CCHHHHHHH--hCccHHHHHHH---cCCC------HHHHHH----H
Confidence            689999999999995 888999999884 6542 344555543  45555444332   2221      111111    1


Q ss_pred             HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCC
Q 026252          159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                      ..   +.+ . . ....+++||+.++|++|+++|++++|+||+....+...++.+|+.++|+  .++++++.+..||+|+
T Consensus        64 ~~---~~~-~-~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~KP~~~  135 (205)
T TIGR01454        64 VR---ESY-R-L-AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD--HVIGSDEVPRPKPAPD  135 (205)
T ss_pred             HH---HHH-H-h-hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee--eEEecCcCCCCCCChH
Confidence            11   111 1 1 1237899999999999999999999999999999999999999999998  7899999899999998


Q ss_pred             CC
Q 026252          239 CC  240 (241)
Q Consensus       239 ~f  240 (241)
                      +|
T Consensus       136 ~~  137 (205)
T TIGR01454       136 IV  137 (205)
T ss_pred             HH
Confidence            76

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.77  E-value=5.8e-18  Score=138.20  Aligned_cols=148  Identities=16%  Similarity=0.251  Sum_probs=99.4

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHH-----H
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEE-----R  151 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  151 (241)
                      +|+|+||+||||+|+.+. +..++.++++++|+...  ......+...  .. .....+. .+.     .....     .
T Consensus         1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~--~~-~~~~~~~-~~~-----~~~~~~~~~~~   68 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIPLT--EDMFAQYKEI--NQ-GLWRAYE-EGK-----ITKDEVVNTRF   68 (224)
T ss_pred             CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCCcc--HHHHHHHHHH--hH-HHHHHHH-cCC-----CCHHHHHHHHH
Confidence            589999999999999995 77789999999887643  2222221111  11 1111111 110     11111     0


Q ss_pred             HHHHHHHH-----HHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe
Q 026252          152 KQFIASLH-----KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       152 ~~~~~~~~-----~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      ..+...+.     +.+.+.|...... ..+++||+.++|+.|+++ ++++|+||+....+...++.+++..+|+  .+++
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd--~i~~  144 (224)
T TIGR02254        69 SALLKEYNTEADEALLNQKYLRFLEE-GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD--DIFV  144 (224)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHhc-cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC--EEEE
Confidence            00111000     1223333333322 368999999999999999 9999999999999999999999999999  8999


Q ss_pred             cCCCCCCCCCCCCC
Q 026252          227 GDVVPRKKPDPLCC  240 (241)
Q Consensus       227 s~~~~~~KP~p~~f  240 (241)
                      +++++..||+|++|
T Consensus       145 ~~~~~~~KP~~~~~  158 (224)
T TIGR02254       145 SEDAGIQKPDKEIF  158 (224)
T ss_pred             cCccCCCCCCHHHH
Confidence            99999999999886

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.77  E-value=5.2e-18  Score=136.29  Aligned_cols=156  Identities=15%  Similarity=0.038  Sum_probs=99.3

Q ss_pred             cEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCch-------HHHHHHHHhcCCCCCCCCCHHH
Q 026252           78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGK-------ERMTAYFNKTGWPEKAPSDEEE  150 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  150 (241)
                      ++|||||||||+|+.+. +..+|+++++++|.. ....+.+..+...+...       ..+..++.......  ......
T Consensus         1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   76 (197)
T TIGR01548         1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV-SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSER--VRDAPT   76 (197)
T ss_pred             CceEEecCceEEechHH-HHHHHHHHHHHHcCC-CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchh--ccCCcc
Confidence            47999999999999995 888999999999753 33445555552222211       12223222110000  001112


Q ss_pred             HHHHHHHHHHHHHHH--HHHHH--HhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe
Q 026252          151 RKQFIASLHKRKTEL--FMVLI--EKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       151 ~~~~~~~~~~~~~~~--~~~~~--~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      .+++.+.+.+.+.+.  +....  ......+.+++.++|+.|+++|++++|+||+.+..++.+++.+|+..+|+  .+++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~~~~  154 (197)
T TIGR01548        77 LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP--VQIW  154 (197)
T ss_pred             HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC--EEEe
Confidence            222222222221110  00000  00012455677999999999999999999999999999999999999998  7899


Q ss_pred             cCCCCCCCCCCCCC
Q 026252          227 GDVVPRKKPDPLCC  240 (241)
Q Consensus       227 s~~~~~~KP~p~~f  240 (241)
                      ++++.. ||+|++|
T Consensus       155 ~~~~~~-KP~p~~~  167 (197)
T TIGR01548       155 MEDCPP-KPNPEPL  167 (197)
T ss_pred             ecCCCC-CcCHHHH
Confidence            999877 9999875

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.76  E-value=2.7e-18  Score=140.67  Aligned_cols=64  Identities=8%  Similarity=0.075  Sum_probs=60.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+  .++++++++..||+|++|
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~iv~s~~~~~~KP~p~~~  155 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD--LLLSTHTFGYPKEDQRLW  155 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC--EEEEeeeCCCCCCCHHHH
Confidence            7899999999999999999999999999999999999999999999  899999999999999887

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.75  E-value=2.7e-17  Score=138.37  Aligned_cols=139  Identities=19%  Similarity=0.192  Sum_probs=99.6

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      ..+++|||||||||+|+.+. +..+|+++++++|... ...+.+..+  .+.....+.+.   .++      ..+..+++
T Consensus        60 ~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~-~~~~~~~~~--~g~~~~~i~~~---~~~------~~~~~~~~  126 (273)
T PRK13225         60 QTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDP-IDERDYAQL--RQWSSRTIVRR---AGL------SPWQQARL  126 (273)
T ss_pred             hhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCC-CCHHHHHHH--hCccHHHHHHH---cCC------CHHHHHHH
Confidence            35899999999999999986 7789999999998863 344555544  44444443332   221      22233333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+.    +.+....  ...+++||+.++|+.|+++|++++|+||+....+..+++.+|+.++|+  .+++++++ ..|
T Consensus       127 ~~~~~----~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~~-~~k  197 (273)
T PRK13225        127 LQRVQ----RQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTPI-LSK  197 (273)
T ss_pred             HHHHH----HHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCCC-CCC
Confidence            33333    2333322  236899999999999999999999999999999999999999999998  67777664 345


Q ss_pred             C
Q 026252          235 P  235 (241)
Q Consensus       235 P  235 (241)
                      |
T Consensus       198 ~  198 (273)
T PRK13225        198 R  198 (273)
T ss_pred             H
Confidence            4

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.74  E-value=9.7e-18  Score=136.03  Aligned_cols=145  Identities=19%  Similarity=0.152  Sum_probs=89.6

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA  156 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (241)
                      +|+||||+||||+|+..  ...+|...+...|..   ..+....  ..+.......+.+. .+.     .+.+   ++.+
T Consensus         2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~---~~~~~~~--~~~~~~~~~~~~~~-~g~-----~~~~---~~~~   65 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLK---DFIVTVN--ITGPDFNPWARTFE-RGE-----LTAE---AFDG   65 (211)
T ss_pred             ceEEEEecCCceecCHH--HHHHHHHHcCCCCCc---cHHHHHH--hcCCCCChHHHHHH-cCC-----CCHH---HHHH
Confidence            68999999999999865  444666665555543   1222222  24444444333222 110     1111   1222


Q ss_pred             HHHHHH----------HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHH--HHHHHHHhcCCCCcccceE
Q 026252          157 SLHKRK----------TELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKA--VTAIVSFLLGPERAEKIQI  224 (241)
Q Consensus       157 ~~~~~~----------~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~--~~~~l~~l~~~~~f~~~~i  224 (241)
                      .+.+..          .+.+ ..+......++||+.++|+.|+++|++++|+||+....  ....+...++.++|+  .+
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd--~v  142 (211)
T TIGR02247        66 LFRHEYGLRLGHDVRIAPVF-PLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFD--AV  142 (211)
T ss_pred             HHHHHhccccCCCcCchhhH-HHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCC--EE
Confidence            222111          1122 22222347899999999999999999999999986443  223334456778998  88


Q ss_pred             EecCCCCCCCCCCCCC
Q 026252          225 FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       225 v~s~~~~~~KP~p~~f  240 (241)
                      +++++++..||+|++|
T Consensus       143 ~~s~~~~~~KP~p~~~  158 (211)
T TIGR02247       143 VESCLEGLRKPDPRIY  158 (211)
T ss_pred             EEeeecCCCCCCHHHH
Confidence            9999999999999887

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.74  E-value=2e-17  Score=133.70  Aligned_cols=149  Identities=26%  Similarity=0.313  Sum_probs=113.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      +..+.+++||+||||+|++.. +..+|+..+.++|...++  +....  ..|....++.+.+....      ......++
T Consensus         7 ~~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~~~~--~~~~~--~mG~~~~eaa~~~~~~~------~dp~s~ee   75 (222)
T KOG2914|consen    7 SLKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKPYPW--DVKVK--SMGKRTSEAARLFVKKL------PDPVSREE   75 (222)
T ss_pred             ccceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCCChH--HHHHH--HcCCCHHHHHHHHHhhc------CCCCCHHH
Confidence            356899999999999999996 888999999999985554  33332  37777777777665221      12223455


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhc-CCCCcccceEEe--cCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL-GPERAEKIQIFA--GDVV  230 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~-~~~~f~~~~iv~--s~~~  230 (241)
                      +..+..+...+.+..      ..+.||+.++++.|+.+|++++++|+.++...+..+++++ +...|+  .++.  +.++
T Consensus        76 ~~~e~~~~~~~~~~~------~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~--~~v~~d~~~v  147 (222)
T KOG2914|consen   76 FNKEEEEILDRLFMN------SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFS--HVVLGDDPEV  147 (222)
T ss_pred             HHHHHHHHHHHhccc------cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcC--CCeecCCccc
Confidence            555555555555533      6889999999999999999999999999999999999886 556677  4555  6678


Q ss_pred             CCCCCCCCCCC
Q 026252          231 PRKKPDPLCCG  241 (241)
Q Consensus       231 ~~~KP~p~~f~  241 (241)
                      ..+||+|++|.
T Consensus       148 ~~gKP~Pdi~l  158 (222)
T KOG2914|consen  148 KNGKPDPDIYL  158 (222)
T ss_pred             cCCCCCchHHH
Confidence            99999999983

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.73  E-value=8.7e-18  Score=131.14  Aligned_cols=137  Identities=25%  Similarity=0.353  Sum_probs=96.7

Q ss_pred             EEEecCcccccCccchHHHHHHHH-HHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHHHH
Q 026252           80 LLFDCDGVLVDTEKDGHRISFNDT-FKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFIAS  157 (241)
Q Consensus        80 ViFD~DGTLvd~~~~~~~~a~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  157 (241)
                      |+||+||||+|+... +..++... ++.++.+  .+.+.++..  .+.........+. ..+         ..       
T Consensus         1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~-------   59 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE--ISAEELREL--FGKSYEEALERLLERFG---------ID-------   59 (176)
T ss_dssp             EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH--HHHHHHHHH--TTSHHHHHHHHHHHHHH---------HH-------
T ss_pred             cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC--CCHHHHHHH--hCCCHHHHHHHhhhccc---------hh-------
Confidence            799999999999984 77788874 6666554  222333332  3333333332222 110         00       


Q ss_pred             HHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCC
Q 026252          158 LHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP  237 (241)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p  237 (241)
                       .....+.+.+.......+++||+.++|+.|+++|++++++||+....+...++++|+.++|+  .++++++.+..||+|
T Consensus        60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~--~i~~~~~~~~~Kp~~  136 (176)
T PF13419_consen   60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD--EIISSDDVGSRKPDP  136 (176)
T ss_dssp             -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS--EEEEGGGSSSSTTSH
T ss_pred             -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc--cccccchhhhhhhHH
Confidence             11222233332222347999999999999999999999999999999999999999999999  899999999999999


Q ss_pred             CCC
Q 026252          238 LCC  240 (241)
Q Consensus       238 ~~f  240 (241)
                      ++|
T Consensus       137 ~~~  139 (176)
T PF13419_consen  137 DAY  139 (176)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            876

...

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.73  E-value=4.1e-17  Score=159.07  Aligned_cols=150  Identities=27%  Similarity=0.295  Sum_probs=108.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHh-cCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK-TGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  153 (241)
                      .++++|||||||||+|+.+. +..+|+++++++|.+.  +.+.+...  .+.....+...+.. .+.+   ....   ++
T Consensus        73 ~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~i--t~e~~~~~--~G~~~~~~~~~~~~~~~l~---~~~~---~~  141 (1057)
T PLN02919         73 GKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVEV--TVEDFVPF--MGTGEANFLGGVASVKGVK---GFDP---DA  141 (1057)
T ss_pred             CCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCCC--CHHHHHHH--hCCCHHHHHHHHHHhcCCC---CCCH---HH
Confidence            46899999999999999995 8889999999998763  44555444  56665555443322 2221   1111   12


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC-CCcccceEEecCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDVVPR  232 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~-~~f~~~~iv~s~~~~~  232 (241)
                      ..+.+.+.+.+.|..   .....++||+.++|+.|+++|++++|+||.....++..++.+++. .+|+  .++++++++.
T Consensus       142 ~~~~~~~~~~~~~~~---~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd--~iv~~~~~~~  216 (1057)
T PLN02919        142 AKKRFFEIYLEKYAK---PNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD--AIVSADAFEN  216 (1057)
T ss_pred             HHHHHHHHHHHHhhh---cccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC--EEEECccccc
Confidence            222222222222211   112357999999999999999999999999999999999999885 7898  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       217 ~KP~Pe~~  224 (1057)
T PLN02919        217 LKPAPDIF  224 (1057)
T ss_pred             CCCCHHHH
Confidence            99999987

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.72  E-value=7.3e-17  Score=133.44  Aligned_cols=145  Identities=14%  Similarity=0.033  Sum_probs=88.9

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCC----CCCHHHHHHHHH---hCC----------chHHHHHHHHh
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV----TWDVDLYGELLK---IGG----------GKERMTAYFNK  137 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~----~~~~~~~~~~~~---~~~----------~~~~~~~~~~~  137 (241)
                      .++|+|+||+||||+|+.+. +..+++++++.++...    .+....+..+..   ...          ....+...+..
T Consensus         8 ~~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   86 (238)
T PRK10748          8 GRISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD   86 (238)
T ss_pred             CCceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence            35799999999999999985 7778888776653211    122222221111   000          00111222222


Q ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      .+.+      .+..+...    +...+.+.. +.. ...++||+.++|+.|+++ ++++++||++..     ++.+|+..
T Consensus        87 ~g~~------~~~~~~~~----~~~~~~~~~-~~~-~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~  148 (238)
T PRK10748         87 AGLS------AEEASAGA----DAAMINFAK-WRS-RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGD  148 (238)
T ss_pred             cCCC------HHHHHHHH----HHHHHHHHH-Hhh-cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHH
Confidence            2211      11111111    111122221 111 268999999999999875 999999998754     37788889


Q ss_pred             CcccceEEecCCCCCCCCCCCCC
Q 026252          218 RAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       218 ~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      +|+  .++++++++..||+|++|
T Consensus       149 ~fd--~i~~~~~~~~~KP~p~~~  169 (238)
T PRK10748        149 YFE--FVLRAGPHGRSKPFSDMY  169 (238)
T ss_pred             hhc--eeEecccCCcCCCcHHHH
Confidence            999  789999999999999987

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.70  E-value=1.1e-16  Score=123.42  Aligned_cols=124  Identities=24%  Similarity=0.331  Sum_probs=89.1

Q ss_pred             EEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Q 026252           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASL  158 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (241)
                      +|+||+||||+|+.+. +..+|+++++++|.    +.+.+...  .|.....+.....             ..+++.   
T Consensus         1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~----~~~~~~~~--~g~~~~~~~~~~~-------------~~~~~~---   57 (154)
T TIGR01549         1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGE----DFQALKAL--RGLAEELLYRIAT-------------SFEELL---   57 (154)
T ss_pred             CeEecCCCcccccHHH-HHHHHHHHHHHhcc----cHHHHHHH--HccChHHHHHHHH-------------HHHHHh---
Confidence            4899999999999885 78899999999874    22333222  2222222211110             111111   


Q ss_pred             HHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCC
Q 026252          159 HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                           . |    .. ....+||+.++|+.|+++|++++|+||+.+..+...++.+ +..+|+  .++++++++ .||+|+
T Consensus        58 -----~-~----~~-~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~--~i~~~~~~~-~Kp~~~  122 (154)
T TIGR01549        58 -----G-Y----DA-EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFD--LILGSDEFG-AKPEPE  122 (154)
T ss_pred             -----C-c----ch-hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCc--EEEecCCCC-CCcCHH
Confidence                 1 1    11 2467799999999999999999999999999999999987 778888  788898888 999998


Q ss_pred             CC
Q 026252          239 CC  240 (241)
Q Consensus       239 ~f  240 (241)
                      +|
T Consensus       123 ~~  124 (154)
T TIGR01549       123 IF  124 (154)
T ss_pred             HH
Confidence            76

HAD subfamilies caused by an overly broad single model.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.69  E-value=1.7e-16  Score=129.93  Aligned_cols=63  Identities=19%  Similarity=0.205  Sum_probs=60.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .+++|++.+.|+.|+++ ++++++||+....+...++.+|+.++||  .+++|+++|..||+|++|
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd--~v~~s~~~g~~KP~~~~f  160 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD--AVFISEDVGVAKPDPEIF  160 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh--eEEEecccccCCCCcHHH
Confidence            78999999999999999 9999999999899999999999999999  899999999999999988

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.68  E-value=8.4e-17  Score=127.82  Aligned_cols=136  Identities=13%  Similarity=0.169  Sum_probs=87.7

Q ss_pred             cEEEEecCcccccCccchHHHHHHHHHH-----hhcCCCCCCHHHHHHH-H-HhCCchHHHHHHHHhcCCCCCCCCCHHH
Q 026252           78 SALLFDCDGVLVDTEKDGHRISFNDTFK-----EKELGVTWDVDLYGEL-L-KIGGGKERMTAYFNKTGWPEKAPSDEEE  150 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (241)
                      ++||||+||||+|+... +..++++.+.     ++|+... +...+... + ..|.....+.   ...      ....  
T Consensus         1 ~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~~-~~~~l~~~~~~~~g~~~~~~~---~~~------~~~~--   67 (184)
T TIGR01993         1 DVWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSEE-EARVLRKDYYREYGTTLAGLM---ILH------EIDA--   67 (184)
T ss_pred             CeEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCHH-HHHHHHHHHHHHHchHHHHHH---Hhh------CCCH--
Confidence            47999999999999885 6667877654     3444321 11111111 0 1222222221   111      1111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCC
Q 026252          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (241)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~  230 (241)
                       +++.+.+.+        .......+++||+.++|+.|+   ++++|+||+.+..+...++.+|+.++|+  .+++++++
T Consensus        68 -~~~~~~~~~--------~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd--~i~~~~~~  133 (184)
T TIGR01993        68 -DEYLRYVHG--------RLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD--GIFCFDTA  133 (184)
T ss_pred             -HHHHHHHhc--------cCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC--eEEEeecc
Confidence             112222211        001112679999999999997   4799999999999999999999999999  89999998


Q ss_pred             CC----CCCCCCCC
Q 026252          231 PR----KKPDPLCC  240 (241)
Q Consensus       231 ~~----~KP~p~~f  240 (241)
                      +.    .||+|++|
T Consensus       134 ~~~~~~~KP~p~~~  147 (184)
T TIGR01993       134 NPDYLLPKPSPQAY  147 (184)
T ss_pred             cCccCCCCCCHHHH
Confidence            77    59999887

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.66  E-value=1.3e-15  Score=120.24  Aligned_cols=63  Identities=27%  Similarity=0.317  Sum_probs=57.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .+++||+.++|+.|+++|++++|+||+.... ..++.++|+..+|+  .++++++++..||+|++|
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~--~i~~~~~~~~~KP~~~~~  146 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD--VVIFSGDVGRGKPDPDIY  146 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC--EEEEcCCCCCCCCCHHHH
Confidence            5889999999999999999999999999887 66666688999998  789999999999999876

HAD subfamilies caused by an overly broad single model.

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.64  E-value=1.2e-15  Score=122.78  Aligned_cols=64  Identities=23%  Similarity=0.281  Sum_probs=56.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-hcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~-l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||+....+...+.. .++..+|+  .++++++++..||+|++|
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~KP~p~~~  147 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAAD--HIYLSQDLGMRKPEARIY  147 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcC--EEEEecccCCCCCCHHHH
Confidence            46899999999999999999999999988777666554 35678898  899999999999999987

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.62  E-value=1.9e-16  Score=124.68  Aligned_cols=57  Identities=28%  Similarity=0.333  Sum_probs=52.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+       +++|+||+....+...++++++..+|+  .++++++++..||+|++|
T Consensus        89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~v~~~~~~~~~KP~p~~f  145 (175)
T TIGR01493        89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFD--RAFSVDTVRAYKPDPVVY  145 (175)
T ss_pred             CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHh--hhccHhhcCCCCCCHHHH
Confidence            679999999998       389999999999999999999999998  789999999999999987

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PLN02811 hydrolase

Probab=99.60  E-value=9.1e-15  Score=119.46  Aligned_cols=139  Identities=21%  Similarity=0.298  Sum_probs=93.7

Q ss_pred             cCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHHHHHHHHH
Q 026252           84 CDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFIASLHKRK  162 (241)
Q Consensus        84 ~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (241)
                      |||||+|++.. +..+|.++++++|...  ..+.+..+  .|.....+...+. ..+.+.  ....+.   +.+.    .
T Consensus         1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~--~G~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~----~   66 (220)
T PLN02811          1 MDGLLLDTEKF-YTEVQEKILARYGKTF--DWSLKAKM--MGKKAIEAARIFVEESGLSD--SLSPED---FLVE----R   66 (220)
T ss_pred             CCCcceecHHH-HHHHHHHHHHHcCCCC--CHHHHHHc--cCCCHHHHHHHHHHHhCCCC--CCCHHH---HHHH----H
Confidence            79999999985 8889999999999863  33444333  5666655544433 233321  011111   2221    1


Q ss_pred             HHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH-HHHHhcCCCCcccceEEecC--CCCCCCCCCCC
Q 026252          163 TELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA-IVSFLLGPERAEKIQIFAGD--VVPRKKPDPLC  239 (241)
Q Consensus       163 ~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~-~l~~l~~~~~f~~~~iv~s~--~~~~~KP~p~~  239 (241)
                      ..++.....  ...++||+.++|+.|+++|++++|+||+.+..... .++..++.++|+  .+++++  +++..||+|++
T Consensus        67 ~~~~~~~~~--~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~--~i~~~~~~~~~~~KP~p~~  142 (220)
T PLN02811         67 EAMLQDLFP--TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMH--HVVTGDDPEVKQGKPAPDI  142 (220)
T ss_pred             HHHHHHHHh--hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCC--EEEECChhhccCCCCCcHH
Confidence            122222111  26889999999999999999999999998765544 333446678898  789999  88899999998


Q ss_pred             C
Q 026252          240 C  240 (241)
Q Consensus       240 f  240 (241)
                      |
T Consensus       143 ~  143 (220)
T PLN02811        143 F  143 (220)
T ss_pred             H
Confidence            7

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.56  E-value=1.1e-14  Score=118.31  Aligned_cols=157  Identities=15%  Similarity=0.121  Sum_probs=96.5

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      +.+|+|+||++|||+...+. ....|..+.+.+|+..+-  ......+  ......+.......+.....-...+.+...
T Consensus         5 ~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~--~~~~~~~--~~~~~~~~~~~p~~~~~~g~l~~~~ww~~l   79 (237)
T KOG3085|consen    5 MRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDD--SLIETIF--RKDFKKMSEKGPFFGLYSGELTLSQWWPKL   79 (237)
T ss_pred             cceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCH--HHHhHhh--hHHHHhhcccCCcccccCCcccHHHHHHHH
Confidence            56899999999999996664 556899999999988432  2222211  010000000000000000000011111111


Q ss_pred             HHH--------HHHHHH-----HHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCccc
Q 026252          155 IAS--------LHKRKT-----ELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK  221 (241)
Q Consensus       155 ~~~--------~~~~~~-----~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~  221 (241)
                      +..        ..+...     ..|.... ...+.+.+|+.++++.||++|+.++++||.+ ...+.++..+++..||| 
T Consensus        80 v~~~f~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d-~r~~~~l~~~~l~~~fD-  156 (237)
T KOG3085|consen   80 VESTFGKAGIDYEEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFD-DRLRLLLLPLGLSAYFD-  156 (237)
T ss_pred             HHHHhccccchhHHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCc-HHHHHHhhccCHHHhhh-
Confidence            110        111111     1111111 1247888999999999999999999999999 44558888899999999 


Q ss_pred             ceEEecCCCCCCCCCCCCC
Q 026252          222 IQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       222 ~~iv~s~~~~~~KP~p~~f  240 (241)
                       .++.|+++|..||+|.||
T Consensus       157 -~vv~S~e~g~~KPDp~If  174 (237)
T KOG3085|consen  157 -FVVESCEVGLEKPDPRIF  174 (237)
T ss_pred             -hhhhhhhhccCCCChHHH
Confidence             899999999999999998

>PHA02597 30

Probab=99.54  E-value=3.8e-14  Score=113.73  Aligned_cols=134  Identities=12%  Similarity=0.087  Sum_probs=78.7

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      |+|+||||+||||+|+..     ++..+++++|++.    +.+...  .+..........  .      +...+..+++.
T Consensus         1 m~k~viFDlDGTLiD~~~-----~~~~~~~~~g~~~----~~~~~~--~g~~~~~~~~~~--~------~~~~~~~~~~~   61 (197)
T PHA02597          1 MKPTILTDVDGVLLSWQS-----GLPYFAQKYNIPT----DHILKM--IQDERFRDPGEL--F------GCDQELAKKLI   61 (197)
T ss_pred             CCcEEEEecCCceEchhh-----ccHHHHHhcCCCH----HHHHHH--HhHhhhcCHHHH--h------cccHHHHHHHh
Confidence            479999999999999654     4677888877642    333322  222211111111  1      01222233333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCccc--ceEEecCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK--IQIFAGDVVPRK  233 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~--~~iv~s~~~~~~  233 (241)
                      +.+..       ..+. ....++||+.++|+.|+++ ++++++||.........++.+++..+|+.  +.++++++.   
T Consensus        62 ~~~~~-------~~~~-~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---  129 (197)
T PHA02597         62 EKYNN-------SDFI-RYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---  129 (197)
T ss_pred             hhhhH-------HHHH-HhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---
Confidence            33321       1111 1267999999999999987 57889999876766667777766554421  156666662   


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       130 ~~kp~~~  136 (197)
T PHA02597        130 ESKEKLF  136 (197)
T ss_pred             cccHHHH
Confidence            5556654

2 hypothetical protein; Provisional

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.51  E-value=1.8e-13  Score=109.79  Aligned_cols=61  Identities=21%  Similarity=0.107  Sum_probs=52.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP  237 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p  237 (241)
                      ..++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|.  ..+..++.+..||++
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~g~~~p~~  139 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS--NELVFDEKGFIQPDG  139 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE--EEEEEcCCCeEecce
Confidence            6899999999999999999999999999999999999999877776  455565556666654

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.42  E-value=1.3e-12  Score=106.45  Aligned_cols=46  Identities=30%  Similarity=0.268  Sum_probs=43.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+++..+|.
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~  129 (219)
T TIGR00338        84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA  129 (219)
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe
Confidence            6799999999999999999999999999999999999999888875

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.38  E-value=5.4e-12  Score=103.04  Aligned_cols=64  Identities=19%  Similarity=0.201  Sum_probs=51.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC--CcccceEEecCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--RAEKIQIFAGDVVPRKKPDPLC  239 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~--~f~~~~iv~s~~~~~~KP~p~~  239 (241)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+ +..  .+.+...+.++.+...||+|.+
T Consensus        73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~  138 (219)
T PRK09552         73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCD  138 (219)
T ss_pred             CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcc
Confidence            689999999999999999999999999999999999987 543  2211134566677778998875

>PLN02954 phosphoserine phosphatase

Probab=99.38  E-value=3.3e-12  Score=104.43  Aligned_cols=118  Identities=17%  Similarity=0.189  Sum_probs=73.5

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHH-HHhcCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  153 (241)
                      +.+|+|+|||||||++++      .+..+++.+|....+ .+....+........+.... +...  .    ...+    
T Consensus        10 ~~~k~viFDfDGTL~~~~------~~~~~~~~~g~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~--~----~~~~----   72 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDE------GIDELAEFCGAGEAV-AEWTAKAMGGSVPFEEALAARLSLF--K----PSLS----   72 (224)
T ss_pred             ccCCEEEEeCCCcccchH------HHHHHHHHcCChHHH-HHHHHHHHCCCCCHHHHHHHHHHHc--C----CCHH----
Confidence            458999999999999974      357777777764222 12222221111222222221 2111  0    0111    


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC--CCcc
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAE  220 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~--~~f~  220 (241)
                             ...+.    ++.....++||+.++|+.|+++|++++|+||+....++.+++.+|+.  .+|.
T Consensus        73 -------~~~~~----~~~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~  130 (224)
T PLN02954         73 -------QVEEF----LEKRPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA  130 (224)
T ss_pred             -------HHHHH----HHHccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE
Confidence                   11111    11122578999999999999999999999999999999999999886  3553

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.35  E-value=6.9e-12  Score=103.11  Aligned_cols=62  Identities=16%  Similarity=0.149  Sum_probs=53.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC----cHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~----~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                      ..+++++.++|+.|+++|++++++||.    ....++.+++.+|+.++|+  .++++++....||+|.
T Consensus       113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~--~i~~~d~~~~~Kp~~~  178 (237)
T TIGR01672       113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNP--VIFAGDKPGQYQYTKT  178 (237)
T ss_pred             CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhee--EEECCCCCCCCCCCHH
Confidence            467778999999999999999999998    6678888999999999998  7888888777788764

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK11590 hypothetical protein; Provisional

Probab=99.29  E-value=3.2e-11  Score=97.97  Aligned_cols=126  Identities=17%  Similarity=0.078  Sum_probs=73.4

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHH-HhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-h---cCCCCCCCCCHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTF-KEKELGVTWDVDLYGELLKIGGGKERMTAYFN-K---TGWPEKAPSDEEE  150 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~  150 (241)
                      ..|+++||+||||++.+   ...+|...+ +++|+... ..+.....  .|.+......... .   .-|.......+++
T Consensus         5 ~~k~~iFD~DGTL~~~d---~~~~~~~~~~~~~g~~~~-~~~~~~~~--ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~   78 (211)
T PRK11590          5 ERRVVFFDLDGTLHQQD---MFGSFLRYLLRRQPLNLL-LVLPLLPV--IGLGLLVKGRAARWPMSLLLWGCTFGHSEAR   78 (211)
T ss_pred             cceEEEEecCCCCcccc---hHHHHHHHHHHhcchhhH-HHhHHHHH--hccCcccchhhhhhhHHHHHHHHHcCCCHHH
Confidence            34799999999999444   334666666 77775532 22333332  3333322111100 0   0000000123333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHH-HHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLI-DQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL-~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+++.+.+.    +.|..    . ..++||+.++| +.|+++|++++|+||+....++.+++.+++.
T Consensus        79 ~~~~~~~f~----~~~~~----~-~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~  136 (211)
T PRK11590         79 LQALEADFV----RWFRD----N-VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWL  136 (211)
T ss_pred             HHHHHHHHH----HHHHH----h-CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccc
Confidence            333333332    22322    1 46799999999 5788899999999999999999999998753

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.25  E-value=7.8e-11  Score=93.35  Aligned_cols=52  Identities=19%  Similarity=0.330  Sum_probs=47.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      .+++||+.++|+.|+++|++++|+||+....++..++.+++.++|+  .+++++
T Consensus        71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~~~~  122 (188)
T TIGR01489        71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI--EIYSNP  122 (188)
T ss_pred             CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee--EEeccC
Confidence            6899999999999999999999999999999999999999999998  677654

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.23  E-value=1.4e-10  Score=93.47  Aligned_cols=46  Identities=20%  Similarity=0.181  Sum_probs=42.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCccc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK  221 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~  221 (241)
                      .+++||+.++|+.|+++ ++++|+||+....++..++.+|+..+|..
T Consensus        67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~  112 (205)
T PRK13582         67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH  112 (205)
T ss_pred             CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc
Confidence            68899999999999999 99999999999999999999998888863

>TIGR01684 viral_ppase viral phosphatase

Probab=99.19  E-value=1.1e-10  Score=97.47  Aligned_cols=59  Identities=10%  Similarity=0.098  Sum_probs=56.0

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLC  239 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~  239 (241)
                      ||+.|+|++|+++|++++|+||+.+..+...++.+|+..+|+  .|++++++...||+|+.
T Consensus       149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd--vIIs~Gdv~~~kp~~e~  207 (301)
T TIGR01684       149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD--IIISGGHKAEEYSTMST  207 (301)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC--EEEECCccccCCCCccc
Confidence            899999999999999999999999999999999999999998  89999999999999963

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.19  E-value=2.3e-10  Score=91.99  Aligned_cols=46  Identities=20%  Similarity=0.122  Sum_probs=42.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      ..++||+.++|+.++++|++++|+|++....++.+++.+|+..+|.
T Consensus        86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~  131 (202)
T TIGR01490        86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIG  131 (202)
T ss_pred             HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEe
Confidence            4689999999999999999999999999999999999998887775

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.17  E-value=1.4e-10  Score=94.60  Aligned_cols=62  Identities=19%  Similarity=0.178  Sum_probs=50.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh---cCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l---~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .+++||+.++|++|+++|++++|+||++...+..+++..   ++.++|+  .++. ..++ .||+|++|
T Consensus        94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~--~~fd-~~~g-~KP~p~~y  158 (220)
T TIGR01691        94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFS--GYFD-TTVG-LKTEAQSY  158 (220)
T ss_pred             cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcc--eEEE-eCcc-cCCCHHHH
Confidence            579999999999999999999999999999888888875   4566776  4443 3333 79999887

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.16  E-value=5e-10  Score=91.08  Aligned_cols=66  Identities=17%  Similarity=0.199  Sum_probs=52.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc-cceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE-KIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~-~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .+++||+.++|+.|+++|++++|+|++....++.+++.++...++. .+.++.++.+...||+|..|
T Consensus        69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~  135 (214)
T TIGR03333        69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDG  135 (214)
T ss_pred             CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCcc
Confidence            6899999999999999999999999999999999999875444442 12455556667788988765

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.11  E-value=1.1e-11  Score=97.15  Aligned_cols=63  Identities=11%  Similarity=-0.001  Sum_probs=56.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC-cHHHHHHHHHHhcCC---------CCcccceEEecCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLLGP---------ERAEKIQIFAGDVVPRKKPDPLC  239 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~-~~~~~~~~l~~l~~~---------~~f~~~~iv~s~~~~~~KP~p~~  239 (241)
                      .+++||+.++|+.|+++|++++|+||+ ....++..++.+++.         ++|+  .++++++....||.|++
T Consensus        44 ~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd--~iv~~~~~~~~kp~~~i  116 (174)
T TIGR01685        44 VTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFD--DRIEIYKPNKAKQLEMI  116 (174)
T ss_pred             EEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhce--eeeeccCCchHHHHHHH
Confidence            689999999999999999999999998 888899999999988         8998  78998887777777654

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.08  E-value=9.9e-11  Score=89.68  Aligned_cols=66  Identities=20%  Similarity=0.180  Sum_probs=48.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCcccceE-EecCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQI-FAGDVVPRKKPDPL  238 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---------------~~~~~~l~~l~~~~~f~~~~i-v~s~~~~~~KP~p~  238 (241)
                      ++++||+.++|+.|+++|++++|+||..+               ..+...++.+++...+....+ ..+++.+..||+|+
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~  105 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPG  105 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHH
Confidence            46789999999999999999999999873               466777888876521110011 12455677899998


Q ss_pred             CC
Q 026252          239 CC  240 (241)
Q Consensus       239 ~f  240 (241)
                      +|
T Consensus       106 ~~  107 (147)
T TIGR01656       106 LI  107 (147)
T ss_pred             HH
Confidence            76

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.07  E-value=6e-10  Score=95.84  Aligned_cols=45  Identities=27%  Similarity=0.254  Sum_probs=40.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      .+++||+.++|+.|++.|++++|+|++.....+.+++.+++...+
T Consensus       180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~  224 (322)
T PRK11133        180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAV  224 (322)
T ss_pred             CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEE
Confidence            689999999999999999999999999988889999988776543

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.07  E-value=5.6e-10  Score=87.22  Aligned_cols=60  Identities=17%  Similarity=0.203  Sum_probs=49.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHH------------HHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEK------------AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~------------~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++||+.++|+.|+++|++++|+||+...            .+..+++.+|+. + +  .++++++...+||+|++|
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~-~-~--~ii~~~~~~~~KP~p~~~  114 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP-I-Q--VLAATHAGLYRKPMTGMW  114 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC-E-E--EEEecCCCCCCCCccHHH
Confidence            7899999999999999999999998753            467888988874 3 3  466666666789999875

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.03  E-value=4.5e-10  Score=88.99  Aligned_cols=62  Identities=21%  Similarity=0.240  Sum_probs=47.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCcccceEEec-----CCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKK  234 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---------------~~~~~~l~~l~~~~~f~~~~iv~s-----~~~~~~K  234 (241)
                      +.++||+.++|++|+++|++++|+||+..               ..+...++.+|+  +|+  .++.+     ++.+..|
T Consensus        28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~--~i~~~~~~~~~~~~~~K  103 (181)
T PRK08942         28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLD--GIYYCPHHPEDGCDCRK  103 (181)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccc--eEEECCCCCCCCCcCCC
Confidence            46889999999999999999999999863               334455666654  355  45543     4567899


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       104 P~p~~~  109 (181)
T PRK08942        104 PKPGML  109 (181)
T ss_pred             CCHHHH
Confidence            999876

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.03  E-value=4.1e-10  Score=83.71  Aligned_cols=57  Identities=21%  Similarity=0.325  Sum_probs=49.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      ..++||+.++|+.|+++|++++++||+....+...++.+++..+++  .+++++.....
T Consensus        23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~   79 (139)
T cd01427          23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD--PVITSNGAAIY   79 (139)
T ss_pred             CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh--heeccchhhhh
Confidence            6899999999999999999999999999999999999998877777  67777664444

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.02  E-value=3.2e-09  Score=86.16  Aligned_cols=46  Identities=26%  Similarity=0.212  Sum_probs=43.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      ..++||+.++++.|+++|++++|+|++....++.+.+.+|+...+.
T Consensus        76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~a  121 (212)
T COG0560          76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVA  121 (212)
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchhee
Confidence            6899999999999999999999999999999999999999887776

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=98.94  E-value=6.5e-09  Score=83.87  Aligned_cols=46  Identities=17%  Similarity=0.086  Sum_probs=42.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCccc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK  221 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~  221 (241)
                      .+++||+.++|+.|+++| +++|+||+....+..+++.+|+..+|..
T Consensus        67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an  112 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH  112 (203)
T ss_pred             CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce
Confidence            689999999999999975 9999999999999999999998877763

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=98.93  E-value=6.8e-09  Score=84.23  Aligned_cols=43  Identities=14%  Similarity=-0.052  Sum_probs=37.3

Q ss_pred             CCCChhHHHHHH-HHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          175 LPLRPGVAKLID-QALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       175 ~~l~pgv~elL~-~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ..++||+.++|+ .|+++|++++|+||+....++.+.+..++..
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~  136 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH  136 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc
Confidence            368999999996 7888999999999999999999998765544

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=98.92  E-value=1e-08  Score=83.97  Aligned_cols=51  Identities=20%  Similarity=0.364  Sum_probs=46.5

Q ss_pred             CCCChhHHHHHHHH--HHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEec
Q 026252          175 LPLRPGVAKLIDQA--LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       175 ~~l~pgv~elL~~L--k~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                      +++.||+.++++.+  ++.|+.+.|+|+++..+++.+|+..|+...|+  .|++-
T Consensus        70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~--~I~TN  122 (234)
T PF06888_consen   70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFS--EIFTN  122 (234)
T ss_pred             CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccc--eEEeC
Confidence            89999999999999  45799999999999999999999999999987  66664

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>PRK08238 hypothetical protein; Validated

Probab=98.89  E-value=3.8e-08  Score=88.96  Aligned_cols=59  Identities=22%  Similarity=0.284  Sum_probs=52.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                      .+++||+.++|++++++|++++++||+.+..++.+++++|+   |+  .++++++....||++.
T Consensus        71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd--~Vigsd~~~~~kg~~K  129 (479)
T PRK08238         71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FD--GVFASDGTTNLKGAAK  129 (479)
T ss_pred             CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CC--EEEeCCCccccCCchH
Confidence            67889999999999999999999999999999999999876   77  7999988777777653

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=98.89  E-value=5e-08  Score=76.54  Aligned_cols=46  Identities=24%  Similarity=0.291  Sum_probs=42.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      ..++||+.++|+.|+++|++++|+|++....++.+++.+|+..++.
T Consensus        72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~  117 (177)
T TIGR01488        72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFA  117 (177)
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchhee
Confidence            6789999999999999999999999999999999999998877665

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=98.80  E-value=2.6e-08  Score=83.49  Aligned_cols=50  Identities=20%  Similarity=0.149  Sum_probs=46.1

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~  230 (241)
                      ||+.++|++|+++|++++|+||+.++.+...++.+|+..+|+  .++++++.
T Consensus       151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFD--vII~~g~i  200 (303)
T PHA03398        151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFD--IIICGGRK  200 (303)
T ss_pred             hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcccc--EEEECCCc
Confidence            888999999999999999999999999999999999999998  77777763

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.79  E-value=3.1e-08  Score=81.48  Aligned_cols=59  Identities=17%  Similarity=0.149  Sum_probs=48.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC----cHHHHHHHHHHhcC--CCCcccceEEecCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLG--PERAEKIQIFAGDVVPRKKPDP  237 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~----~~~~~~~~l~~l~~--~~~f~~~~iv~s~~~~~~KP~p  237 (241)
                      ..++||+.++|+.|+++|++++++||.    .....+.+++.+|+  .++|+  .++++++.  .||++
T Consensus       113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~--vil~gd~~--~K~~K  177 (237)
T PRK11009        113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNP--VIFAGDKP--GQYTK  177 (237)
T ss_pred             CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCccccee--EEEcCCCC--CCCCH
Confidence            678999999999999999999999995    45577777777888  67887  67777653  66665

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.77  E-value=2.8e-08  Score=78.98  Aligned_cols=142  Identities=15%  Similarity=0.130  Sum_probs=85.5

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHH----HH-HHhhcCCCCCCHHHHHHHHH-hCCchHHHHHHHHhcCCCCCCCCCH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFN----DT-FKEKELGVTWDVDLYGELLK-IGGGKERMTAYFNKTGWPEKAPSDE  148 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~----~~-~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  148 (241)
                      ..+++++||+|+||+..... ...+.+    +. ..++|.+.+-.......+++ .|....   . +...+.    ... 
T Consensus        13 ~~~~~l~FDiDdtLYp~St~-i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~a---G-L~~~~~----~~d-   82 (244)
T KOG3109|consen   13 PNYKCLFFDIDDTLYPLSTG-IQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMA---G-LKAVGY----IFD-   82 (244)
T ss_pred             ccceEEEEecccccccCchh-HHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHH---H-HHHhcc----cCC-
Confidence            46899999999999998764 444444    32 33466654322222222211 111111   1 111111    011 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecC
Q 026252          149 EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                        .+++..-.+.+.  .+      ..+.+.+...++|-.|++++  ..+.||+.+.++..+|+.+|+.+.|+  .|++-+
T Consensus        83 --~deY~~~V~~~L--Pl------q~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFe--gii~~e  148 (244)
T KOG3109|consen   83 --ADEYHRFVHGRL--PL------QDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFE--GIICFE  148 (244)
T ss_pred             --HHHHHHHhhccC--cH------hhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhcc--ceeEee
Confidence              122222111110  01      11688899999999999874  78999999999999999999999999  666654


Q ss_pred             CCC------CCCCCCCCC
Q 026252          229 VVP------RKKPDPLCC  240 (241)
Q Consensus       229 ~~~------~~KP~p~~f  240 (241)
                      -..      -.||.+..|
T Consensus       149 ~~np~~~~~vcKP~~~af  166 (244)
T KOG3109|consen  149 TLNPIEKTVVCKPSEEAF  166 (244)
T ss_pred             ccCCCCCceeecCCHHHH
Confidence            322      358988766

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.66  E-value=4.7e-08  Score=78.77  Aligned_cols=57  Identities=35%  Similarity=0.510  Sum_probs=46.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                      .+++||+.++|+.|+++|++++++||.+...+..+.+.+|+.+     .++.++..  .||+|.
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-----~~v~a~~~--~kP~~k  182 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-----SIVFARVI--GKPEPK  182 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-----EEEEESHE--TTTHHH
T ss_pred             CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-----cccccccc--ccccch
Confidence            3789999999999999999999999999999999999998733     23333322  777765

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=98.62  E-value=1.1e-07  Score=86.45  Aligned_cols=60  Identities=18%  Similarity=0.191  Sum_probs=50.5

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcH------------HHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNE------------KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~------------~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++|||.+.|+.|+++|++++|+||...            ..+..+++.+|+.  |+  .+++.++...+||+|.++
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fd--viia~~~~~~RKP~pGm~  269 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQ--VFIAIGAGFYRKPLTGMW  269 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eE--EEEeCCCCCCCCCCHHHH
Confidence            689999999999999999999999865            4577888888764  66  677777778899999875

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=98.60  E-value=6.2e-08  Score=75.28  Aligned_cols=62  Identities=15%  Similarity=0.125  Sum_probs=51.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC---------------cHHHHHHHHHHhcCCCCcccceEE-e----cCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIF-A----GDVVPRKK  234 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~---------------~~~~~~~~l~~l~~~~~f~~~~iv-~----s~~~~~~K  234 (241)
                      ++++||+.++|++|+++|++++|+||.               ....+..+++.+|+.  |+  .++ +    +++.+..|
T Consensus        28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd--~ii~~~~~~~~~~~~~K  103 (161)
T TIGR01261        28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FD--DVLICPHFPDDNCDCRK  103 (161)
T ss_pred             eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--ee--EEEECCCCCCCCCCCCC
Confidence            578999999999999999999999997               355778888888875  65  344 4    57888999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       104 P~~~~~  109 (161)
T TIGR01261       104 PKIKLL  109 (161)
T ss_pred             CCHHHH
Confidence            999875

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=98.57  E-value=1.8e-06  Score=72.48  Aligned_cols=69  Identities=14%  Similarity=0.195  Sum_probs=54.9

Q ss_pred             HHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceE------EecCCCCCCCCCCC
Q 026252          168 VLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI------FAGDVVPRKKPDPL  238 (241)
Q Consensus       168 ~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~i------v~s~~~~~~KP~p~  238 (241)
                      +...+..+.+.||+.++++.|+++|++++|+|++....++..++.+|+.+.+.  .+      +..+.+-.+||.|-
T Consensus       113 ~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~--~IvSN~L~f~~dGvltG~~~P~  187 (277)
T TIGR01544       113 EIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV--KVVSNFMDFDEDGVLKGFKGPL  187 (277)
T ss_pred             HHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc--eEEeeeEEECCCCeEeCCCCCc
Confidence            33443458999999999999999999999999999999999999998765554  44      54555555688773

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>PRK06769 hypothetical protein; Validated

Probab=98.55  E-value=6e-08  Score=76.30  Aligned_cols=64  Identities=11%  Similarity=-0.042  Sum_probs=46.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHH--------HHHHHHHHhcCCCCcccceE-EecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK--------AVTAIVSFLLGPERAEKIQI-FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~--------~~~~~l~~l~~~~~f~~~~i-v~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|++|+++|++++|+||+...        .....++.+|+..+|.  .+ .++++++..||+|++|
T Consensus        27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~~~~KP~p~~~   99 (173)
T PRK06769         27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL--CPHKHGDGCECRKPSTGML   99 (173)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE--CcCCCCCCCCCCCCCHHHH
Confidence            568999999999999999999999998742        1333355555444432  12 2466678899999886

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.52  E-value=7.4e-07  Score=74.54  Aligned_cols=59  Identities=19%  Similarity=0.176  Sum_probs=44.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCCCCcccceEEecCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP  235 (241)
                      ..++||+.++|+.|+++|++++++||..   +......|+.+|+...+.. .++..++ ...||
T Consensus       117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-~lllr~~-~~~K~  178 (266)
T TIGR01533       117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-HLLLKKD-KSSKE  178 (266)
T ss_pred             CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-eEEeCCC-CCCcH
Confidence            6789999999999999999999999986   4445577888877654432 5665543 34454

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=98.51  E-value=1.9e-07  Score=81.08  Aligned_cols=62  Identities=16%  Similarity=0.219  Sum_probs=48.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC---------------cHHHHHHHHHHhcCCCCcccceEE-e----cCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIF-A----GDVVPRKK  234 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~---------------~~~~~~~~l~~l~~~~~f~~~~iv-~----s~~~~~~K  234 (241)
                      ..++||+.++|++|+++|++++|+||.               .......+++.+++.  |+  .++ +    +++.+.+|
T Consensus        29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd--~i~i~~~~~sd~~~~rK  104 (354)
T PRK05446         29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FD--EVLICPHFPEDNCSCRK  104 (354)
T ss_pred             ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--ee--eEEEeCCcCcccCCCCC
Confidence            478999999999999999999999995               245566777877663  55  444 3    35667899


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       105 P~p~~l  110 (354)
T PRK05446        105 PKTGLV  110 (354)
T ss_pred             CCHHHH
Confidence            999765

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=98.51  E-value=1.8e-06  Score=74.68  Aligned_cols=53  Identities=11%  Similarity=0.125  Sum_probs=47.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh-c-------CCCCcccceEEecCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-L-------GPERAEKIQIFAGDV  229 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l-~-------~~~~f~~~~iv~s~~  229 (241)
                      +...||+.++|++|+++|++++|+||+....++.+++.+ |       +.++||  .|+++..
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD--~IIt~a~  243 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFD--VVIVDAR  243 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCc--EEEeCCC
Confidence            577999999999999999999999999999999999997 6       789998  6777653

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=98.48  E-value=6.2e-07  Score=71.49  Aligned_cols=50  Identities=24%  Similarity=0.398  Sum_probs=45.9

Q ss_pred             CCCChhHHHHHHHHHHCCC-eEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe
Q 026252          175 LPLRPGVAKLIDQALEKGV-KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi-~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      +++.||+.++|+.+++.|- -+.|+|+.+..+++.+|+++++.+.|.  .|++
T Consensus        83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~--~IfT  133 (256)
T KOG3120|consen   83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS--EIFT  133 (256)
T ss_pred             CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH--HHhc
Confidence            7999999999999999985 899999999999999999999998887  5655

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=98.47  E-value=2.2e-07  Score=73.23  Aligned_cols=62  Identities=13%  Similarity=0.136  Sum_probs=46.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCcccceEEec-----------C
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIFAG-----------D  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---------------~~~~~~l~~l~~~~~f~~~~iv~s-----------~  228 (241)
                      +.++||+.++|++|+++|++++|+||+..               ..+...+..+++.  |+  .++.+           +
T Consensus        25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~--~i~~~~~~~~~~~~~~~  100 (176)
T TIGR00213        25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LD--GIYYCPHHPEGVEEFRQ  100 (176)
T ss_pred             eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--cc--EEEECCCCCcccccccC
Confidence            57899999999999999999999999984               3344555555443  54  34432           3


Q ss_pred             CCCCCCCCCCCC
Q 026252          229 VVPRKKPDPLCC  240 (241)
Q Consensus       229 ~~~~~KP~p~~f  240 (241)
                      +...+||+|++|
T Consensus       101 ~~~~~KP~p~~~  112 (176)
T TIGR00213       101 VCDCRKPKPGML  112 (176)
T ss_pred             CCCCCCCCHHHH
Confidence            456789999886

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=98.46  E-value=4.1e-06  Score=65.05  Aligned_cols=52  Identities=19%  Similarity=0.356  Sum_probs=44.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      +.+.||.+|+++..+++++++.|+|++....+..+++.+++.+..+.+.+++
T Consensus        72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~s  123 (220)
T COG4359          72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS  123 (220)
T ss_pred             cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEee
Confidence            6889999999999999999999999999999999999997766655433333

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=98.44  E-value=5.6e-06  Score=64.86  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=40.9

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      .+++-||+.|+...|+++|..++++|++-+..+..+-..+|+.-
T Consensus        86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~  129 (227)
T KOG1615|consen   86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPK  129 (227)
T ss_pred             CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence            48999999999999999999999999999999999999997764

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.44  E-value=4.2e-07  Score=68.04  Aligned_cols=60  Identities=23%  Similarity=0.287  Sum_probs=49.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc--------HHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN--------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~--------~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+.        ...+...++.+++.  ++  .++.+.  +..||+|++|
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~--~~~~~~--~~~KP~~~~~   91 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--ID--VLYACP--HCRKPKPGMF   91 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EE--EEEECC--CCCCCChHHH
Confidence            4688999999999999999999999998        88899999998775  33  233333  5789999876

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01686 FkbH FkbH-like domain

Probab=98.41  E-value=2.5e-07  Score=79.81  Aligned_cols=56  Identities=18%  Similarity=0.243  Sum_probs=47.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH----hcCCCCcccceEEecCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF----LLGPERAEKIQIFAGDVVPRKKPDPL  238 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~----l~~~~~f~~~~iv~s~~~~~~KP~p~  238 (241)
                      .+++|+.++|+.|+++|++++|+||++...+...++.    ++..++|+  .+.++     .||+|+
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~--~~~~~-----~~pk~~   90 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD--ARSIN-----WGPKSE   90 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee--EEEEe-----cCchHH
Confidence            3579999999999999999999999999999999999    88888887  45443     356654

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.38  E-value=1.6e-07  Score=70.16  Aligned_cols=59  Identities=10%  Similarity=0.079  Sum_probs=48.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCC-cHHHHHHHHHHhc-------CCCCcccceEEecCCCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLL-------GPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~-~~~~~~~~l~~l~-------~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .++||+.++|+.|+++|++++++||+ ....+...++.++       +.++|+  .++++++    ||+|++|
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~--~~~~~~~----~pkp~~~   95 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFD--PLTIGYW----LPKSPRL   95 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhh--hhhhcCC----CcHHHHH
Confidence            36799999999999999999999999 8888888889887       678888  6777754    4666544

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=98.35  E-value=1e-06  Score=67.46  Aligned_cols=59  Identities=15%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCC-cccceEEecCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER-AEKIQIFAGDVVPRKKPD  236 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~-f~~~~iv~s~~~~~~KP~  236 (241)
                      ..++||+.|+|+.|+ ++++++|+||+.+..++.+++.+++..+ |+  .+++++++...||+
T Consensus        44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~--~i~~~~d~~~~KP~  103 (148)
T smart00577       44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGY--RRLFRDECVFVKGK  103 (148)
T ss_pred             EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEee--eEEECccccccCCe
Confidence            578999999999998 5799999999999999999999987554 46  78999999999986

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=98.26  E-value=7.6e-06  Score=64.80  Aligned_cols=39  Identities=26%  Similarity=0.381  Sum_probs=35.0

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      |++.++|+.++++|++++|+|++....++.+++.+|+..
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~  130 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD  130 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence            555599999999999999999999999999999887654

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.21  E-value=9.4e-07  Score=68.90  Aligned_cols=42  Identities=26%  Similarity=0.413  Sum_probs=32.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeC-CcHHHHHHHHHHhcCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCST-SNEKAVTAIVSFLLGP  216 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn-~~~~~~~~~l~~l~~~  216 (241)
                      +.+||+|.++|+.|+++|+++++.|- ...+.++.+|+.+++.
T Consensus        44 v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~   86 (169)
T PF12689_consen   44 VSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID   86 (169)
T ss_dssp             E---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred             EEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence            78999999999999999999999994 5667999999999988

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=98.06  E-value=4.1e-06  Score=71.45  Aligned_cols=64  Identities=17%  Similarity=0.205  Sum_probs=56.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC-CcccceEEecC-------CCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGD-------VVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~-~f~~~~iv~s~-------~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||......+..++.+++.+ +|+  .+++.+       +.+..||+|+++
T Consensus       186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~~~~~~~~~~~~kp~p~~~  257 (300)
T PHA02530        186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPPDMHFQREQGDKRPDDVVK  257 (300)
T ss_pred             CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcchhhhcccCCCCCCcHHHH
Confidence            5789999999999999999999999999999999999999886 888  677777       456789998764

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.02  E-value=2e-06  Score=72.74  Aligned_cols=61  Identities=11%  Similarity=-0.024  Sum_probs=39.9

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHH-HHHHHhcCCCCcccceEE---ecCCCCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVT-AIVSFLLGPERAEKIQIF---AGDVVPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~-~~l~~l~~~~~f~~~~iv---~s~~~~~~KP~p~~f  240 (241)
                      -|+|+.++++.|+++|+ ++|+||.+..... ..+...+...+|+  .+.   ..+....+||+|.+|
T Consensus       144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~--~i~~~~g~~~~~~gKP~p~~~  208 (279)
T TIGR01452       144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVA--AIETASGRQPLVVGKPSPYMF  208 (279)
T ss_pred             CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHH--HHHHHhCCceeccCCCCHHHH
Confidence            48899999999998887 7899998754321 1122333334454  232   234456789999876

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=98.00  E-value=1.8e-05  Score=60.71  Aligned_cols=38  Identities=29%  Similarity=0.368  Sum_probs=32.3

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      |.+.+.++.++++|+++.|+||+.+..+....+.+|+.
T Consensus        49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~   86 (175)
T COG2179          49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP   86 (175)
T ss_pred             HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence            44557777899999999999999999999999988653

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=97.93  E-value=1.3e-06  Score=73.11  Aligned_cols=62  Identities=6%  Similarity=-0.158  Sum_probs=46.9

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC---CCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR---KKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~---~KP~p~~f  240 (241)
                      .|+++.+.++.|++.+++++++||.+.......+..+|...+|+  .+..+.....   .||+|++|
T Consensus       121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~--~i~~~~~~~~~~~gKP~p~~~  185 (257)
T TIGR01458       121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVT--ALEYATDTKATVVGKPSKTFF  185 (257)
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHH--HHHHHhCCCceeecCCCHHHH
Confidence            47899999999999999999999998776666666666667776  4554444333   79999876

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.86  E-value=2.4e-05  Score=61.35  Aligned_cols=55  Identities=20%  Similarity=0.199  Sum_probs=43.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc-HHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~-~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+. ...+..+++.+++..       +    .+..||+|++|
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~-------~----~~~~KP~p~~~   97 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV-------L----PHAVKPPGCAF   97 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------E----cCCCCCChHHH
Confidence            4788999999999999999999999998 566777766664321       1    13469999876

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.86  E-value=5.6e-05  Score=63.73  Aligned_cols=41  Identities=17%  Similarity=0.178  Sum_probs=34.6

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      +++.++|++|+++|++++++||.....+...++.+++..++
T Consensus        24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~   64 (273)
T PRK00192         24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF   64 (273)
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence            34557888999999999999999999999999999876554

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.86  E-value=2.4e-05  Score=64.81  Aligned_cols=53  Identities=17%  Similarity=0.159  Sum_probs=46.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH--HHHHHhcCCC-CcccceEEecCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVT--AIVSFLLGPE-RAEKIQIFAGDV  229 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~--~~l~~l~~~~-~f~~~~iv~s~~  229 (241)
                      ..++||+.|+|++|+++|++++++||+.+....  ..++.+|+.. +|+  .|+++.+
T Consensus        23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~--~Ii~s~~   78 (242)
T TIGR01459        23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPE--MIISSGE   78 (242)
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccc--eEEccHH
Confidence            468999999999999999999999999877666  7889999887 888  7888774

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=97.76  E-value=0.0001  Score=60.29  Aligned_cols=35  Identities=14%  Similarity=0.103  Sum_probs=23.1

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+.|++|+++|++++++|+.+...+..+++.+++.
T Consensus        26 ~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (230)
T PRK01158         26 VEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS   60 (230)
T ss_pred             HHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            35556666777777777777766666666666543

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.74  E-value=0.00021  Score=58.38  Aligned_cols=44  Identities=20%  Similarity=0.093  Sum_probs=37.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHH---HHHHHHHhcCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSFLLGPER  218 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~---~~~~l~~l~~~~~  218 (241)
                      .+..||+.++++.|+++|++|.++||-....   ....|...|...+
T Consensus       119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~  165 (229)
T TIGR01675       119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW  165 (229)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence            6889999999999999999999999998655   6667777776544

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=97.67  E-value=0.00024  Score=59.56  Aligned_cols=35  Identities=23%  Similarity=0.164  Sum_probs=29.7

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+.|++|+++|++++++|+.....+..+++.+++.
T Consensus        26 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~   60 (270)
T PRK10513         26 KQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME   60 (270)
T ss_pred             HHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence            36677889999999999999988888888888764

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=97.58  E-value=0.00028  Score=59.14  Aligned_cols=18  Identities=28%  Similarity=0.444  Sum_probs=15.5

Q ss_pred             CCcEEEEecCcccccCcc
Q 026252           76 LPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~   93 (241)
                      ++|+|+||+||||++...
T Consensus         2 ~~kli~~DlDGTLl~~~~   19 (272)
T PRK10530          2 TYRVIALDLDGTLLTPKK   19 (272)
T ss_pred             CccEEEEeCCCceECCCC
Confidence            479999999999997654

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=97.58  E-value=0.00016  Score=51.58  Aligned_cols=52  Identities=17%  Similarity=0.225  Sum_probs=37.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCCCCcccceEEecC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      -.++||+.|+|++|+++|.++.++||+.   +......|+.+|+.--.+  .|+++-
T Consensus        13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~--~i~ts~   67 (101)
T PF13344_consen   13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDED--EIITSG   67 (101)
T ss_dssp             TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GG--GEEEHH
T ss_pred             CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcC--EEEChH
Confidence            3678999999999999999999999994   345555667777663333  677764

...

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=97.57  E-value=0.00029  Score=57.14  Aligned_cols=38  Identities=16%  Similarity=0.206  Sum_probs=30.0

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      |+..+.|++|+++|++++++|+.....+..+++.++..
T Consensus        21 ~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~   58 (215)
T TIGR01487        21 ERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS   58 (215)
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence            44457778888889999999999888888888877654

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=97.56  E-value=0.00029  Score=59.24  Aligned_cols=18  Identities=28%  Similarity=0.512  Sum_probs=15.1

Q ss_pred             CCcEEEEecCcccccCcc
Q 026252           76 LPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~   93 (241)
                      |+|+|+||+||||++.+.
T Consensus         1 m~kli~~DlDGTLl~~~~   18 (272)
T PRK15126          1 MARLAAFDMDGTLLMPDH   18 (272)
T ss_pred             CccEEEEeCCCcCcCCCC
Confidence            379999999999997554

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.56  E-value=0.00014  Score=62.83  Aligned_cols=28  Identities=29%  Similarity=0.456  Sum_probs=20.9

Q ss_pred             EEEEecCcccccCccchHHHHHHHHHHhhc
Q 026252           79 ALLFDCDGVLVDTEKDGHRISFNDTFKEKE  108 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g  108 (241)
                      +|+||+||||+++... + ..+.++++.++
T Consensus         2 ~~ifD~DGvL~~g~~~-i-~ga~eal~~L~   29 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKP-I-AGASDALRRLN   29 (321)
T ss_pred             EEEEeCcCceECCccc-c-HHHHHHHHHHh
Confidence            6899999999999985 4 35566655543

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.54  E-value=7.3e-05  Score=59.66  Aligned_cols=28  Identities=21%  Similarity=0.484  Sum_probs=20.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN  202 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~  202 (241)
                      +++.||+.|+|++|.++|..+.++|...
T Consensus        72 l~p~~gA~e~l~~L~~~g~~~~~Itar~   99 (191)
T PF06941_consen   72 LPPIPGAVEALKKLRDKGHEIVIITARP   99 (191)
T ss_dssp             --B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred             CCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence            6899999999999999997777777664

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=97.51  E-value=0.00031  Score=57.77  Aligned_cols=44  Identities=25%  Similarity=0.231  Sum_probs=35.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPER  218 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~~~  218 (241)
                      .+..||+.++++.++++|++|..+||-.   +.....-|+..|...+
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~  160 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW  160 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc
Confidence            4788999999999999999999999984   4456666777775543

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=97.50  E-value=0.00035  Score=58.41  Aligned_cols=35  Identities=26%  Similarity=0.202  Sum_probs=27.1

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.|++++++|++++++|+.....+..+++.++...
T Consensus        27 ~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~   61 (264)
T COG0561          27 EALARLREKGVKVVLATGRPLPDVLSILEELGLDG   61 (264)
T ss_pred             HHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence            56667778888888888888788888888776654

>PRK10976 putative hydrolase; Provisional

Probab=97.47  E-value=0.00041  Score=58.04  Aligned_cols=17  Identities=24%  Similarity=0.378  Sum_probs=14.9

Q ss_pred             CcEEEEecCcccccCcc
Q 026252           77 PSALLFDCDGVLVDTEK   93 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~   93 (241)
                      +|+|++|+||||++...
T Consensus         2 ikli~~DlDGTLl~~~~   18 (266)
T PRK10976          2 YQVVASDLDGTLLSPDH   18 (266)
T ss_pred             ceEEEEeCCCCCcCCCC
Confidence            79999999999997654

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=97.33  E-value=0.0012  Score=55.19  Aligned_cols=44  Identities=16%  Similarity=0.053  Sum_probs=34.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHHhcCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPER  218 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~---~~~~~l~~l~~~~~  218 (241)
                      .+..||++++.+.|+++|++|.++||-...   ....-|+..|...+
T Consensus       144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~  190 (275)
T TIGR01680       144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW  190 (275)
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence            688999999999999999999999999753   34455555565443

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=97.29  E-value=0.00082  Score=52.39  Aligned_cols=38  Identities=21%  Similarity=0.252  Sum_probs=34.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF  212 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~  212 (241)
                      .++||++.+.|++-++.|++++|-|.++...+..+..+
T Consensus       102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fgh  139 (229)
T COG4229         102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGH  139 (229)
T ss_pred             cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcc
Confidence            68999999999999999999999999998888777664

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=97.28  E-value=0.0011  Score=56.00  Aligned_cols=39  Identities=5%  Similarity=0.031  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       181 v~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      +.+.|++|+++|++++++|+.....+..+.+.+++..+|
T Consensus        23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~   61 (302)
T PRK12702         23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPF   61 (302)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeE
Confidence            346778999999999999999999999999999876544

>PTZ00445 p36-lilke protein; Provisional

Probab=97.22  E-value=0.0015  Score=52.52  Aligned_cols=62  Identities=18%  Similarity=0.199  Sum_probs=42.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHH---------------HHHHHHHHhcCCCCcccceEEecC-----------C
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEK---------------AVTAIVSFLLGPERAEKIQIFAGD-----------V  229 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~---------------~~~~~l~~l~~~~~f~~~~iv~s~-----------~  229 (241)
                      .+.|+..+++.+|++.|++++|||=++..               .++..|+.-+..-...  .+++-.           .
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~--~~~~yyp~~w~~p~~y~~  152 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIK--KVYAYYPKFWQEPSDYRP  152 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceee--eeeeeCCcccCChhhhhh
Confidence            45688889999999999999999998764               4666676442221111  233211           1


Q ss_pred             CCCCCCCCCC
Q 026252          230 VPRKKPDPLC  239 (241)
Q Consensus       230 ~~~~KP~p~~  239 (241)
                      ++..||+|++
T Consensus       153 ~gl~KPdp~i  162 (219)
T PTZ00445        153 LGLDAPMPLD  162 (219)
T ss_pred             hcccCCCccc
Confidence            4778999998

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=97.18  E-value=0.0016  Score=48.27  Aligned_cols=30  Identities=13%  Similarity=0.176  Sum_probs=24.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHH
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKA  205 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~  205 (241)
                      .+.+++.+.|++|+++|+.++++|+.....
T Consensus        24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~   53 (126)
T TIGR01689        24 APILAVIEKLRHYKALGFEIVISSSRNMRT   53 (126)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence            355778889999999999999999886543

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PTZ00174 phosphomannomutase; Provisional

Probab=97.11  E-value=0.0018  Score=53.80  Aligned_cols=19  Identities=37%  Similarity=0.639  Sum_probs=16.4

Q ss_pred             CCCcEEEEecCcccccCcc
Q 026252           75 VLPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~   93 (241)
                      |.+|.|+||+||||++...
T Consensus         3 ~~~klia~DlDGTLL~~~~   21 (247)
T PTZ00174          3 MKKTILLFDVDGTLTKPRN   21 (247)
T ss_pred             CCCeEEEEECcCCCcCCCC
Confidence            5689999999999997665

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.09  E-value=0.0011  Score=51.23  Aligned_cols=53  Identities=17%  Similarity=0.207  Sum_probs=45.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC-CCcccceEEecCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGDV  229 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~-~~f~~~~iv~s~~  229 (241)
                      ..++||+.++|+.|++. +.++|+|++.+..+..+++.++.. .+|.. .+++.++
T Consensus        57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~-ri~~rd~  110 (156)
T TIGR02250        57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGD-RIISRDE  110 (156)
T ss_pred             EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeecc-EEEEecc
Confidence            67899999999999865 999999999999999999999877 47731 5666665

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.99  E-value=0.0029  Score=53.19  Aligned_cols=34  Identities=18%  Similarity=0.191  Sum_probs=29.4

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      +.|++|+++|++++++|+.....+..+++.+++.
T Consensus        31 ~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~   64 (271)
T PRK03669         31 PWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ   64 (271)
T ss_pred             HHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence            6677888999999999999989999999988764

>PLN02887 hydrolase family protein

Probab=96.97  E-value=0.0027  Score=59.00  Aligned_cols=35  Identities=31%  Similarity=0.431  Sum_probs=29.2

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+.|++|+++|+.++++|+.....+...++.+++.
T Consensus       331 ~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~  365 (580)
T PLN02887        331 AKALKEALSRGVKVVIATGKARPAVIDILKMVDLA  365 (580)
T ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence            36778889999999999999888888888887653

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=96.93  E-value=0.0043  Score=48.37  Aligned_cols=21  Identities=33%  Similarity=0.340  Sum_probs=17.4

Q ss_pred             CCCCcEEEEecCcccccCccc
Q 026252           74 SVLPSALLFDCDGVLVDTEKD   94 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~   94 (241)
                      ...+|+||||.|+||+.+...
T Consensus        38 ~~Gik~li~DkDNTL~~~~~~   58 (168)
T PF09419_consen   38 KKGIKALIFDKDNTLTPPYED   58 (168)
T ss_pred             hcCceEEEEcCCCCCCCCCcC
Confidence            357999999999999876653

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=96.85  E-value=0.0027  Score=49.32  Aligned_cols=58  Identities=10%  Similarity=0.110  Sum_probs=48.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC-CcccceEEecCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~-~f~~~~iv~s~~~~~~KP  235 (241)
                      ...+||+.|+|+.|.+. +.++|.|++.+..++.+++.++... +|+  .+++.+.....||
T Consensus        41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~--~~l~r~~~~~~~~   99 (162)
T TIGR02251        41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS--RRLYRESCVFTNG   99 (162)
T ss_pred             EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe--EEEEccccEEeCC
Confidence            57889999999999987 9999999999999999999998665 777  6777766443343

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=96.84  E-value=0.00027  Score=58.78  Aligned_cols=61  Identities=13%  Similarity=-0.078  Sum_probs=33.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH--HH-HHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA--IV-SFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~--~l-~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .-|+...+.+..|+ +|.+ .++||.+......  .+ ..-.+...+.  ...+.+.+...||+|++|
T Consensus       121 ~~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~--~~~~~~~~~~gKP~~~~~  184 (249)
T TIGR01457       121 IDYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLE--VATGVKPVYIGKPNAIIM  184 (249)
T ss_pred             CCHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHH--HHhCCCccccCCChHHHH
Confidence            34566666677774 5777 7889986433211  00 0000111222  344555666789999876

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=96.82  E-value=0.00081  Score=52.61  Aligned_cols=37  Identities=19%  Similarity=0.017  Sum_probs=33.1

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      -|+.|+++|++++|+||.....++..++.+++..+|+
T Consensus        42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~   78 (169)
T TIGR02726        42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHE   78 (169)
T ss_pred             HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEe
Confidence            4567889999999999999999999999998887775

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=96.81  E-value=0.005  Score=57.73  Aligned_cols=34  Identities=12%  Similarity=0.033  Sum_probs=28.8

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      +.|++|+++|++++++|+.....+..+++.+++.
T Consensus       440 eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~  473 (694)
T PRK14502        440 DALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK  473 (694)
T ss_pred             HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            5677888999999999999988888888888654

>PLN02645 phosphoglycolate phosphatase

Probab=96.69  E-value=0.00059  Score=58.68  Aligned_cols=55  Identities=9%  Similarity=-0.036  Sum_probs=31.1

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHH-HHHHHHHhcCCCCcccceEEecCCCC---CCCCCCCCC
Q 026252          184 LIDQALEKGVKVAVCSTSNEKA-VTAIVSFLLGPERAEKIQIFAGDVVP---RKKPDPLCC  240 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~-~~~~l~~l~~~~~f~~~~iv~s~~~~---~~KP~p~~f  240 (241)
                      ....|++++-.++|+||.+... ....+...|...+|+  .+..+....   .+||+|.+|
T Consensus       178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~--~i~~~~~~~~~~~gKP~p~~~  236 (311)
T PLN02645        178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVG--AIKGSTEREPLVVGKPSTFMM  236 (311)
T ss_pred             HHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHH--HHHHHhCCCcccCCCChHHHH
Confidence            4455544333688999988533 223333444545666  455544432   259999876

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=96.56  E-value=0.003  Score=48.09  Aligned_cols=36  Identities=22%  Similarity=0.162  Sum_probs=29.9

Q ss_pred             HHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          185 IDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       185 L~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      |+.|.+.|++++|+|+.+...++...+.+|+..++.
T Consensus        44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~q   79 (170)
T COG1778          44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQ   79 (170)
T ss_pred             HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeee
Confidence            456677799999999999999999999998876654

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=96.54  E-value=0.087  Score=48.25  Aligned_cols=36  Identities=17%  Similarity=0.175  Sum_probs=26.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-hcCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGP  216 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~-l~~~  216 (241)
                      ++|.+.+.+   +++|.. +|+|.+.+..++.+.+. +|..
T Consensus       111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid  147 (497)
T PLN02177        111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGAD  147 (497)
T ss_pred             cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCC
Confidence            667666544   566754 99999999999999976 5544

>PLN02645 phosphoglycolate phosphatase

Probab=96.45  E-value=0.0073  Score=51.97  Aligned_cols=51  Identities=20%  Similarity=0.195  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCCCCcccceEEecC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      .++||+.|+|+.|+++|++++++||+.   .......|+.+|+...++  .|+++.
T Consensus        44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~--~I~ts~   97 (311)
T PLN02645         44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEE--EIFSSS   97 (311)
T ss_pred             ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChh--hEeehH
Confidence            356999999999999999999999987   444444556777765555  677764

>COG4996 Predicted phosphatase [General function prediction only]

Probab=96.26  E-value=0.0076  Score=44.54  Aligned_cols=50  Identities=18%  Similarity=0.086  Sum_probs=46.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      +.++|.|+++++.+|..|+-++..|=+...-+...|+.+++.+||+  .++.
T Consensus        40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFh--y~Vi   89 (164)
T COG4996          40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFH--YIVI   89 (164)
T ss_pred             EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEE--EEEe
Confidence            7899999999999999999999999999899999999999999998  4554

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=96.24  E-value=0.0077  Score=56.01  Aligned_cols=46  Identities=24%  Similarity=0.231  Sum_probs=43.2

Q ss_pred             CCCChhHHHHHHHHHHCC-CeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~g-i~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      -+++||+.++|++|+++| ++++++||.....++.+++.+|+.++|.
T Consensus       383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~  429 (556)
T TIGR01525       383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHA  429 (556)
T ss_pred             ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeec
Confidence            479999999999999999 9999999999999999999999987775

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=96.23  E-value=0.00044  Score=57.25  Aligned_cols=62  Identities=16%  Similarity=0.186  Sum_probs=46.5

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       178 ~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++++.++++.|+++|+++ |+||.+.......+..++...+|.....++.+....+||+|++|
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~  201 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIF  201 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHH
Confidence            689999999999999997 88999877776666666655566511114555556899999876

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=96.23  E-value=0.011  Score=49.52  Aligned_cols=53  Identities=21%  Similarity=0.221  Sum_probs=38.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHhcCC-CCcccceEEecCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGP-ERAEKIQIFAGDV  229 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---~~~~~~l~~l~~~-~~f~~~~iv~s~~  229 (241)
                      ..++||+.|+|++|+++|+++.++||++.   +.+...|+.+++. ...+  .|++|-+
T Consensus        23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~--~i~TS~~   79 (269)
T COG0647          23 NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPD--DIVTSGD   79 (269)
T ss_pred             CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHH--HeecHHH
Confidence            46889999999999999999999999943   3344555553333 3444  5777654

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=96.09  E-value=0.0088  Score=55.38  Aligned_cols=46  Identities=20%  Similarity=0.144  Sum_probs=43.1

Q ss_pred             CCCChhHHHHHHHHHHCCC-eEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGV-KVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi-~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      -+++||+.++|++|+++|+ +++++||.....++.+++.+|+.++|.
T Consensus       361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~  407 (536)
T TIGR01512       361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHA  407 (536)
T ss_pred             ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhh
Confidence            4789999999999999999 999999999999999999999988775

.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=96.06  E-value=0.026  Score=46.20  Aligned_cols=45  Identities=13%  Similarity=0.118  Sum_probs=35.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHH----HHHHHHHhcCCCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA----VTAIVSFLLGPERA  219 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~----~~~~l~~l~~~~~f  219 (241)
                      ..+.||+.|+|.+.-++|.+|.-+||...+.    ...-|++.|+...-
T Consensus       121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~  169 (274)
T COG2503         121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL  169 (274)
T ss_pred             cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc
Confidence            5788999999999999999999999996655    34445555555433

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=95.93  E-value=0.011  Score=45.42  Aligned_cols=37  Identities=24%  Similarity=0.161  Sum_probs=33.8

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +|++|+++|++++|+||.....+...++.+|+..+|+
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~   72 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQ   72 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEe
Confidence            7899999999999999999999999999998877665

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=95.93  E-value=0.01  Score=45.87  Aligned_cols=59  Identities=25%  Similarity=0.456  Sum_probs=39.4

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCC---cH-----------HHHHHHHHHhcCCCCcccceEEecCC-CCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTS---NE-----------KAVTAIVSFLLGPERAEKIQIFAGDV-VPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~---~~-----------~~~~~~l~~l~~~~~f~~~~iv~s~~-~~~~KP~p~~f  240 (241)
                      ++|+|.+.|++|.+.||.++|+||-   .+           ..+..+++.+++.  +   .++.+.. -..+||.|-|+
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~---~~~~a~~~d~~RKP~~GM~  103 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I---QVYAAPHKDPCRKPNPGMW  103 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E---EEEECGCSSTTSTTSSHHH
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e---EEEecCCCCCCCCCchhHH
Confidence            4568999999999999999999997   22           3445555555443  2   3444433 37899998653

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=95.76  E-value=0.024  Score=47.16  Aligned_cols=50  Identities=10%  Similarity=0.254  Sum_probs=39.6

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHHhcCCCCcccceEEecC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~---~~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      +.||+.++|++|+++|++++++||+   ....+...++.+|+....+  .|+++.
T Consensus        18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~--~iit~~   70 (249)
T TIGR01457        18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLE--TVFTAS   70 (249)
T ss_pred             eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEeeHH
Confidence            4579999999999999999999995   4667777788887765444  566664

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=95.72  E-value=0.024  Score=47.96  Aligned_cols=51  Identities=20%  Similarity=0.244  Sum_probs=38.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCCCCcccceEEecC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      .++||+.|+|++|+++|++++++||+.   +......++.+|+....+  .++++.
T Consensus        18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~--~i~ts~   71 (279)
T TIGR01452        18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAE--QLFSSA   71 (279)
T ss_pred             eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChh--hEecHH
Confidence            356999999999999999999999974   334445667777654444  577654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=95.56  E-value=0.03  Score=46.80  Aligned_cols=50  Identities=14%  Similarity=0.183  Sum_probs=37.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHHhcCCCCcccceEEecC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEK---AVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~---~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      +.||+.+.|++|+++|++++++||+...   .....++.+|+.--.+  .|+++.
T Consensus        22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~--~i~ts~   74 (257)
T TIGR01458        22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISED--EVFTPA   74 (257)
T ss_pred             cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHH--HeEcHH
Confidence            6799999999999999999999998444   4666677776542222  566653

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=95.47  E-value=0.036  Score=43.72  Aligned_cols=63  Identities=16%  Similarity=0.219  Sum_probs=42.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC---------------cHHHHHHHHHHhcCCCCcccceEEecC----CCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIFAGD----VVPRKKP  235 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~---------------~~~~~~~~l~~l~~~~~f~~~~iv~s~----~~~~~KP  235 (241)
                      +.+.||+.+.|..|++.|++++++||.               .+......|+..|+  .|+. ..++..    ....+||
T Consensus        30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~-i~~Cph~p~~~c~cRKP  106 (181)
T COG0241          30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDG-ILYCPHHPEDNCDCRKP  106 (181)
T ss_pred             hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccce-EEECCCCCCCCCcccCC
Confidence            577899999999999999999999993               12233444554444  3442 233332    1356899


Q ss_pred             CCCCC
Q 026252          236 DPLCC  240 (241)
Q Consensus       236 ~p~~f  240 (241)
                      .|.+|
T Consensus       107 ~~gm~  111 (181)
T COG0241         107 KPGML  111 (181)
T ss_pred             ChHHH
Confidence            98765

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=95.04  E-value=0.04  Score=54.10  Aligned_cols=53  Identities=23%  Similarity=0.456  Sum_probs=47.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~  230 (241)
                      +++||+.+.|+.|++.|+++.++||.....+..+.+.+|+...++  .+++++++
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~v~g~~l  580 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS--QSVSGEKL  580 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC--ceeEhHHh
Confidence            789999999999999999999999999999999999999887766  56666554

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=94.98  E-value=0.043  Score=51.18  Aligned_cols=42  Identities=21%  Similarity=0.263  Sum_probs=39.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+++||+.++|++|+++|++++++||..+..++.+++.+|+.
T Consensus       404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~  445 (562)
T TIGR01511       404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN  445 (562)
T ss_pred             ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence            478999999999999999999999999999999999999874

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>PRK10444 UMP phosphatase; Provisional

Probab=94.86  E-value=0.065  Score=44.57  Aligned_cols=51  Identities=12%  Similarity=0.206  Sum_probs=35.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH---HHHhcCCCCcccceEEecC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAI---VSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~---l~~l~~~~~f~~~~iv~s~  228 (241)
                      ++.||+.++|+.|+++|+++.++||+.......+   |+.+|+.--.+  .++++.
T Consensus        17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~--~i~ts~   70 (248)
T PRK10444         17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDS--VFYTSA   70 (248)
T ss_pred             eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHh--hEecHH
Confidence            4579999999999999999999999965444444   44455432222  566653

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=94.85  E-value=0.38  Score=43.79  Aligned_cols=28  Identities=11%  Similarity=-0.107  Sum_probs=24.1

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSF  212 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~  212 (241)
                      .++..++.| +++|+|.+.+-.++..++.
T Consensus       101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake  128 (498)
T PLN02499        101 AWKVFSSCD-KRVVVTRMPRVMVERFAKE  128 (498)
T ss_pred             HHHHHHcCC-eEEEEeCCHHHHHHHHHHH
Confidence            455666778 9999999999999999998

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=94.69  E-value=0.063  Score=48.46  Aligned_cols=52  Identities=15%  Similarity=0.241  Sum_probs=38.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhc---------CCCCcccceEEecC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL---------GPERAEKIQIFAGD  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~---------~~~~f~~~~iv~s~  228 (241)
                      +..-|....+|+.||+.|.++.++||+.-..+...++.+-         +.++||  .||+..
T Consensus       182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFD--vVIv~A  242 (448)
T PF05761_consen  182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFD--VVIVDA  242 (448)
T ss_dssp             EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCEC--EEEES-
T ss_pred             ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhhee--EEEEcC
Confidence            3446899999999999999999999999999999999873         446788  666643

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PLN02423 phosphomannomutase

Probab=94.66  E-value=0.028  Score=46.67  Aligned_cols=30  Identities=30%  Similarity=0.499  Sum_probs=19.6

Q ss_pred             CCcEEE-EecCcccccCccchHHHHHHHHHHh
Q 026252           76 LPSALL-FDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        76 ~~k~Vi-FD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      +++.++ ||+||||++.... +.....+++++
T Consensus         5 ~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~   35 (245)
T PLN02423          5 KPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE   35 (245)
T ss_pred             ccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence            456666 9999999998764 33334444443

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=94.04  E-value=0.23  Score=41.43  Aligned_cols=38  Identities=16%  Similarity=0.214  Sum_probs=31.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l  213 (241)
                      ..-+++.++|+.|.++|+++..+|..........++.+
T Consensus        81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~L  118 (252)
T PF11019_consen   81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLREL  118 (252)
T ss_pred             EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHH
Confidence            45689999999999999999999999777666666655

The function is not known.

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=93.83  E-value=0.15  Score=44.02  Aligned_cols=50  Identities=14%  Similarity=0.172  Sum_probs=40.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh---cCCCCcccceEEe
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFA  226 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l---~~~~~f~~~~iv~  226 (241)
                      +.-.|....+|++|+++|.++.++||++-.++..-+..+   .+.++||  .|+.
T Consensus       239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFD--VVIv  291 (510)
T KOG2470|consen  239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFD--VVIV  291 (510)
T ss_pred             hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhh--eeEE
Confidence            345578889999999999999999999999999888766   3456677  4544

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=93.52  E-value=0.043  Score=44.43  Aligned_cols=26  Identities=23%  Similarity=0.339  Sum_probs=18.0

Q ss_pred             EEEecCcccccCccchHHHHHHHHHHh
Q 026252           80 LLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        80 ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      |+||+||||++.... +.....+++++
T Consensus         1 i~~DlDGTLl~~~~~-i~~~~~~al~~   26 (225)
T TIGR01482         1 IASDIDGTLTDPNRA-INESALEAIRK   26 (225)
T ss_pred             CeEeccCccCCCCcc-cCHHHHHHHHH
Confidence            579999999998764 33344555554

catalyze the same reaction as SPP.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=93.48  E-value=0.2  Score=41.25  Aligned_cols=51  Identities=22%  Similarity=0.239  Sum_probs=35.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHH-hcCCCCcccceEEecC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSF-LLGPERAEKIQIFAGD  228 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~-l~~~~~f~~~~iv~s~  228 (241)
                      .++||+.+.|+.|+++|+++.++||+.   .......|.. +|+.--.+  .++++.
T Consensus        14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~--~iits~   68 (236)
T TIGR01460        14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPD--QIITSG   68 (236)
T ss_pred             ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHH--HeeeHH
Confidence            568999999999999999999999884   3334344444 45433333  566653

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=93.26  E-value=0.16  Score=48.98  Aligned_cols=44  Identities=27%  Similarity=0.231  Sum_probs=40.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      +++||+.+.|++|+++|++++++|+.+...++.+.+.+|+..++
T Consensus       568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~  611 (741)
T PRK11033        568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA  611 (741)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec
Confidence            88999999999999999999999999999999999999885333

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=93.21  E-value=0.047  Score=40.41  Aligned_cols=14  Identities=36%  Similarity=0.700  Sum_probs=12.5

Q ss_pred             cEEEEecCcccccC
Q 026252           78 SALLFDCDGVLVDT   91 (241)
Q Consensus        78 k~ViFD~DGTLvd~   91 (241)
                      |+|+||+||||++.
T Consensus         1 k~~~~D~dgtL~~~   14 (132)
T TIGR01662         1 KGVVLDLDGTLTDD   14 (132)
T ss_pred             CEEEEeCCCceecC
Confidence            68999999999974

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>PRK10671 copA copper exporting ATPase; Provisional

Probab=93.12  E-value=0.15  Score=49.95  Aligned_cols=45  Identities=18%  Similarity=0.192  Sum_probs=41.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +++||+.+.|++|+++|++++++|+.+...++.+.+.+|+.++|.
T Consensus       650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~  694 (834)
T PRK10671        650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIA  694 (834)
T ss_pred             cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEe
Confidence            789999999999999999999999999999999999998876554

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=93.07  E-value=0.15  Score=38.28  Aligned_cols=51  Identities=12%  Similarity=0.146  Sum_probs=34.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC--c----HHHHHHHHHHhcCCCCcccceEEecC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS--N----EKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~--~----~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      +.+.|++.+.+++|.+. +.++|+|..  .    ..-.+.+.+.+...++-.  .|+|+.
T Consensus        67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn--~vfCgn  123 (180)
T COG4502          67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQN--IVFCGN  123 (180)
T ss_pred             cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhh--EEEecC
Confidence            68899999999999987 999999988  2    223334444444434333  466654

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=92.99  E-value=0.18  Score=39.76  Aligned_cols=37  Identities=22%  Similarity=0.146  Sum_probs=31.9

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .|+.|+++|++++|+||.....+..+++.+|+..+|.
T Consensus        56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~   92 (183)
T PRK09484         56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ   92 (183)
T ss_pred             HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec
Confidence            5567788999999999999999999999998776664

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=92.95  E-value=0.86  Score=37.75  Aligned_cols=46  Identities=15%  Similarity=0.238  Sum_probs=35.3

Q ss_pred             HHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          170 IEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       170 ~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      ..+....+++|+.++++.|.++++|+.|+|.+--..++..|++.+.
T Consensus        84 V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~  129 (246)
T PF05822_consen   84 VKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGV  129 (246)
T ss_dssp             HHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT-
T ss_pred             HHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCC
Confidence            3444589999999999999999999999999999999999998843

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=92.93  E-value=0.049  Score=41.76  Aligned_cols=15  Identities=47%  Similarity=0.707  Sum_probs=13.5

Q ss_pred             CcEEEEecCcccccC
Q 026252           77 PSALLFDCDGVLVDT   91 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~   91 (241)
                      +|+|+||+||||++.
T Consensus         1 ~~~~~~D~Dgtl~~~   15 (154)
T TIGR01670         1 IRLLILDVDGVLTDG   15 (154)
T ss_pred             CeEEEEeCceeEEcC
Confidence            589999999999993

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=92.68  E-value=0.059  Score=42.57  Aligned_cols=16  Identities=38%  Similarity=0.480  Sum_probs=14.8

Q ss_pred             CCcEEEEecCcccccC
Q 026252           76 LPSALLFDCDGVLVDT   91 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~   91 (241)
                      .+|+|+||+||||++.
T Consensus        20 ~ikli~~D~Dgtl~~~   35 (183)
T PRK09484         20 NIRLLICDVDGVFSDG   35 (183)
T ss_pred             CceEEEEcCCeeeecC
Confidence            4899999999999986

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=92.65  E-value=0.3  Score=39.44  Aligned_cols=38  Identities=18%  Similarity=0.246  Sum_probs=34.5

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      +.+.++|++|+++|++++++||.....+..+++.+++.
T Consensus        19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~   56 (221)
T TIGR02463        19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT   56 (221)
T ss_pred             HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            44789999999999999999999999999999998764

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=92.59  E-value=0.33  Score=39.69  Aligned_cols=41  Identities=7%  Similarity=-0.031  Sum_probs=36.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ..+++.+.|++|+++|++++++|+.+...+..+++.+|+..
T Consensus        16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461        16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP   56 (225)
T ss_pred             CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            44678999999999999999999999898999999887644

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=92.48  E-value=0.066  Score=41.86  Aligned_cols=16  Identities=31%  Similarity=0.536  Sum_probs=14.8

Q ss_pred             CCcEEEEecCcccccC
Q 026252           76 LPSALLFDCDGVLVDT   91 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~   91 (241)
                      .+|+++||+||||.|.
T Consensus         6 ~i~~~v~d~dGv~tdg   21 (169)
T TIGR02726         6 NIKLVILDVDGVMTDG   21 (169)
T ss_pred             cCeEEEEeCceeeECC
Confidence            4899999999999997

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=92.46  E-value=0.33  Score=46.78  Aligned_cols=37  Identities=14%  Similarity=0.150  Sum_probs=29.3

Q ss_pred             CChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHh
Q 026252          177 LRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFL  213 (241)
Q Consensus       177 l~pgv~elL~~Lk~~-gi~v~ivTn~~~~~~~~~l~~l  213 (241)
                      +.+++.+.|++|.+. |+.++|+|+.....++..+..+
T Consensus       515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~  552 (726)
T PRK14501        515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL  552 (726)
T ss_pred             CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC
Confidence            446777889999984 9999999999888777666543

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=92.17  E-value=0.086  Score=39.09  Aligned_cols=15  Identities=33%  Similarity=0.534  Sum_probs=13.4

Q ss_pred             cEEEEecCcccccCc
Q 026252           78 SALLFDCDGVLVDTE   92 (241)
Q Consensus        78 k~ViFD~DGTLvd~~   92 (241)
                      |+++||+||||++..
T Consensus         1 kli~~DlD~Tl~~~~   15 (128)
T TIGR01681         1 KVIVFDLDNTLWTGE   15 (128)
T ss_pred             CEEEEeCCCCCCCCC
Confidence            679999999999884

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=92.13  E-value=0.36  Score=36.88  Aligned_cols=52  Identities=15%  Similarity=0.287  Sum_probs=40.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC-CCCcccceEEecCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDV  229 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~-~~~f~~~~iv~s~~  229 (241)
                      ..++||+.++|+.|.+. +.++|.|.+.+..++.+++.+.- ..+|+  .++..+.
T Consensus        35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~--~~~~r~~   87 (159)
T PF03031_consen   35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFS--RRLYRDD   87 (159)
T ss_dssp             EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEE--EEEEGGG
T ss_pred             EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccc--ccccccc
Confidence            56789999999999765 99999999999999999999965 45676  5665543

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>smart00775 LNS2 LNS2 domain

Probab=92.11  E-value=0.1  Score=40.22  Aligned_cols=14  Identities=21%  Similarity=0.558  Sum_probs=12.6

Q ss_pred             EEEEecCcccccCc
Q 026252           79 ALLFDCDGVLVDTE   92 (241)
Q Consensus        79 ~ViFD~DGTLvd~~   92 (241)
                      .|+||+||||++++
T Consensus         1 iVisDIDGTL~~sd   14 (157)
T smart00775        1 IVISDIDGTITKSD   14 (157)
T ss_pred             CEEEecCCCCcccc
Confidence            38999999999987

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=92.08  E-value=0.25  Score=47.18  Aligned_cols=44  Identities=27%  Similarity=0.280  Sum_probs=41.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.|++.+.+++||++|+++.++|+.++..++.+-+.+|+.+++
T Consensus       537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~  580 (713)
T COG2217         537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVR  580 (713)
T ss_pred             CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhe
Confidence            78999999999999999999999999999999999999886655

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=92.02  E-value=0.24  Score=47.03  Aligned_cols=44  Identities=16%  Similarity=0.139  Sum_probs=40.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.||+.+.+++|++.|+++.++|+.+...+..+.+.+|+.+++
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~  489 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI  489 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE
Confidence            78999999999999999999999999999999999999876543

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=91.96  E-value=0.29  Score=46.58  Aligned_cols=44  Identities=16%  Similarity=0.243  Sum_probs=41.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.||+.+.+++||+.|+++.++|+.+...+..+-+.+|+.++|
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~  484 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFV  484 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEE
Confidence            78999999999999999999999999999999999999887654

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=91.84  E-value=0.28  Score=46.66  Aligned_cols=44  Identities=16%  Similarity=0.198  Sum_probs=40.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.||+.|.+++||+.|+++.++|+.+...+..+-+.+|+.++|
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~  488 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFL  488 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEE
Confidence            67899999999999999999999999999999999999886544

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=91.55  E-value=0.59  Score=39.38  Aligned_cols=50  Identities=20%  Similarity=0.187  Sum_probs=45.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD  228 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~  228 (241)
                      ..|.+.+-|.+|+++|-.+++=|-++++.+...++.+++.++|+  .++++.
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd--~ii~~G  192 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFD--IIICGG  192 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccE--EEEeCC
Confidence            56899999999999999999999999999999999999999998  566544

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=91.48  E-value=0.13  Score=41.71  Aligned_cols=15  Identities=27%  Similarity=0.625  Sum_probs=12.9

Q ss_pred             EEEecCcccccCccc
Q 026252           80 LLFDCDGVLVDTEKD   94 (241)
Q Consensus        80 ViFD~DGTLvd~~~~   94 (241)
                      |+||+||||++....
T Consensus         1 i~~DlDGTLl~~~~~   15 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGK   15 (254)
T ss_dssp             EEEECCTTTCSTTSS
T ss_pred             cEEEECCceecCCCe
Confidence            689999999997665

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=91.37  E-value=0.52  Score=39.00  Aligned_cols=41  Identities=24%  Similarity=0.293  Sum_probs=35.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+.+.+.+.|++|+++|++++++|+.....+...++.++..
T Consensus        16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   56 (256)
T TIGR00099        16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD   56 (256)
T ss_pred             ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            35577889999999999999999999999898888888654

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PRK10444 UMP phosphatase; Provisional

Probab=90.86  E-value=0.14  Score=42.60  Aligned_cols=17  Identities=29%  Similarity=0.481  Sum_probs=15.2

Q ss_pred             CcEEEEecCcccccCcc
Q 026252           77 PSALLFDCDGVLVDTEK   93 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~   93 (241)
                      |++|+||+||||++...
T Consensus         1 ~~~v~~DlDGtL~~~~~   17 (248)
T PRK10444          1 IKNVICDIDGVLMHDNV   17 (248)
T ss_pred             CcEEEEeCCCceEeCCe
Confidence            58999999999999865

>COG0731 Fe-S oxidoreductases [Energy production and conversion]

Probab=90.65  E-value=0.46  Score=40.42  Aligned_cols=40  Identities=15%  Similarity=0.223  Sum_probs=32.9

Q ss_pred             hcCCCCChhHHHHHHHHHHCC-CeEEEEeCCcHHHHHHHHH
Q 026252          172 KKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVS  211 (241)
Q Consensus       172 ~~~~~l~pgv~elL~~Lk~~g-i~v~ivTn~~~~~~~~~l~  211 (241)
                      .+++.|||..-|+|+.+|+.| ++++||||+..+.+...|.
T Consensus        88 ~GEPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~  128 (296)
T COG0731          88 SGEPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELK  128 (296)
T ss_pred             CCCcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhc
Confidence            355899999999999999999 7999999999744444433

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=90.56  E-value=0.64  Score=37.47  Aligned_cols=41  Identities=15%  Similarity=0.259  Sum_probs=36.1

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+.+.+.+.|++|+++|++++++|+.+...+..+++.++..
T Consensus        15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~   55 (225)
T TIGR01482        15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP   55 (225)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence            46688899999999999999999999988888888888643

catalyze the same reaction as SPP.

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=90.34  E-value=0.19  Score=41.62  Aligned_cols=15  Identities=27%  Similarity=0.676  Sum_probs=12.7

Q ss_pred             EEEEecCcccccCcc
Q 026252           79 ALLFDCDGVLVDTEK   93 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~   93 (241)
                      .|+||+||||++...
T Consensus         1 li~~DlDGTLl~~~~   15 (256)
T TIGR00099         1 LIFIDLDGTLLNDDH   15 (256)
T ss_pred             CEEEeCCCCCCCCCC
Confidence            378999999999765

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=90.16  E-value=0.77  Score=38.09  Aligned_cols=38  Identities=16%  Similarity=0.200  Sum_probs=34.1

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      +...+.|++|+++|++++++|+.....+..+++.+++.
T Consensus        19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~   56 (256)
T TIGR01486        19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE   56 (256)
T ss_pred             hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999988764

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=89.98  E-value=0.19  Score=35.71  Aligned_cols=15  Identities=47%  Similarity=0.806  Sum_probs=13.0

Q ss_pred             EEEecCcccccCccc
Q 026252           80 LLFDCDGVLVDTEKD   94 (241)
Q Consensus        80 ViFD~DGTLvd~~~~   94 (241)
                      ++||+||||++....
T Consensus         1 ~l~D~dGvl~~g~~~   15 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEP   15 (101)
T ss_dssp             EEEESTTTSEETTEE
T ss_pred             CEEeCccEeEeCCCc
Confidence            689999999997764

...

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=89.96  E-value=0.22  Score=39.73  Aligned_cols=14  Identities=50%  Similarity=0.899  Sum_probs=12.0

Q ss_pred             EEEEecCcccccCc
Q 026252           79 ALLFDCDGVLVDTE   92 (241)
Q Consensus        79 ~ViFD~DGTLvd~~   92 (241)
                      .|+||+||||++..
T Consensus         1 li~~D~DgTL~~~~   14 (204)
T TIGR01484         1 LLFFDLDGTLLDPN   14 (204)
T ss_pred             CEEEeCcCCCcCCC
Confidence            37899999999875

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=89.81  E-value=0.22  Score=41.89  Aligned_cols=21  Identities=33%  Similarity=0.409  Sum_probs=18.4

Q ss_pred             CCCCcEEEEecCcccccCccc
Q 026252           74 SVLPSALLFDCDGVLVDTEKD   94 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~   94 (241)
                      +..+++++||+||||++....
T Consensus         5 ~~~y~~~l~DlDGvl~~G~~~   25 (269)
T COG0647           5 MDKYDGFLFDLDGVLYRGNEA   25 (269)
T ss_pred             hhhcCEEEEcCcCceEeCCcc
Confidence            467999999999999998764

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=89.78  E-value=0.59  Score=39.63  Aligned_cols=37  Identities=11%  Similarity=0.170  Sum_probs=30.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF  212 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~  212 (241)
                      .+.||+.|+|+.|++.|-.+.++||++....+...++
T Consensus        38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK   74 (306)
T KOG2882|consen   38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKK   74 (306)
T ss_pred             CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHH
Confidence            6779999999999999999999999965555555443

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=89.40  E-value=0.77  Score=45.61  Aligned_cols=52  Identities=23%  Similarity=0.301  Sum_probs=43.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~  229 (241)
                      ++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+..--.  .++.+++
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~  630 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKE  630 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHH
Confidence            788999999999999999999999999999999999998764322  3555544

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=89.23  E-value=0.76  Score=44.53  Aligned_cols=42  Identities=19%  Similarity=0.152  Sum_probs=39.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.+
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~  483 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT  483 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999999999999998854

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=88.62  E-value=0.91  Score=45.00  Aligned_cols=42  Identities=26%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +++||+.+.|+.|++.|+++.++|+.....+..+.+.+|+..
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~  578 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFS  578 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999999998754

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=88.39  E-value=0.22  Score=38.16  Aligned_cols=17  Identities=35%  Similarity=0.649  Sum_probs=13.6

Q ss_pred             cEEEEecCcccccCccc
Q 026252           78 SALLFDCDGVLVDTEKD   94 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~~   94 (241)
                      |++|||+||||+.....
T Consensus         1 k~LVlDLD~TLv~~~~~   17 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSK   17 (159)
T ss_dssp             EEEEEE-CTTTEEEESS
T ss_pred             CEEEEeCCCcEEEEeec
Confidence            57999999999997753

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=88.36  E-value=1.1  Score=43.52  Aligned_cols=39  Identities=21%  Similarity=0.329  Sum_probs=37.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL  214 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~  214 (241)
                      ++.||+...+..||+.|++++++|+.+...++..-+.+|
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG  761 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG  761 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC
Confidence            788999999999999999999999999999999999997

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=88.28  E-value=0.46  Score=38.38  Aligned_cols=14  Identities=36%  Similarity=0.667  Sum_probs=12.3

Q ss_pred             EEEecCcccccCcc
Q 026252           80 LLFDCDGVLVDTEK   93 (241)
Q Consensus        80 ViFD~DGTLvd~~~   93 (241)
                      |++|+||||++...
T Consensus         2 i~~DlDGTLL~~~~   15 (221)
T TIGR02463         2 VFSDLDGTLLDSHS   15 (221)
T ss_pred             EEEeCCCCCcCCCC
Confidence            78999999999765

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK13762 tRNA-modifying enzyme; Provisional

Probab=88.24  E-value=1.2  Score=38.56  Aligned_cols=32  Identities=16%  Similarity=0.253  Sum_probs=28.6

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHH
Q 026252          173 KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEK  204 (241)
Q Consensus       173 ~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~  204 (241)
                      +++.++|...++++.++++|+.+.|.||+...
T Consensus       139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~  170 (322)
T PRK13762        139 GEPTLYPYLPELIEEFHKRGFTTFLVTNGTRP  170 (322)
T ss_pred             ccccchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence            55778999999999999999999999999653

>smart00775 LNS2 LNS2 domain

Probab=88.19  E-value=1.3  Score=34.08  Aligned_cols=37  Identities=24%  Similarity=0.250  Sum_probs=31.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH---HHHHH
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVT---AIVSF  212 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~---~~l~~  212 (241)
                      ...||+.+++++|+++|+++.++|+.+.....   ..++.
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~   66 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ   66 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence            56799999999999999999999999766653   55555

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=88.09  E-value=1.5  Score=32.42  Aligned_cols=43  Identities=7%  Similarity=0.094  Sum_probs=36.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC-cHHHHHHHHHHhcCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS-NEKAVTAIVSFLLGPE  217 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~-~~~~~~~~l~~l~~~~  217 (241)
                      +-.|+++...|..|+++|+.+++.|++ ....+...|+.+.+..
T Consensus        43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~   86 (144)
T KOG4549|consen   43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQ   86 (144)
T ss_pred             eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCc
Confidence            678999999999999999999999999 5677788888775443

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=88.03  E-value=1  Score=36.43  Aligned_cols=41  Identities=15%  Similarity=0.268  Sum_probs=37.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      .+.|...+.|+.|+++|++++++|+.....+..+++.++..
T Consensus        15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~   55 (254)
T PF08282_consen   15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID   55 (254)
T ss_dssp             SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred             eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence            47799999999999999999999999999999999987655

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=87.81  E-value=0.38  Score=39.31  Aligned_cols=15  Identities=27%  Similarity=0.434  Sum_probs=12.2

Q ss_pred             EEEEecCcccccCcc
Q 026252           79 ALLFDCDGVLVDTEK   93 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~   93 (241)
                      .|+||+||||++...
T Consensus         1 li~~DlDGTLl~~~~   15 (225)
T TIGR02461         1 VIFTDLDGTLLPPGY   15 (225)
T ss_pred             CEEEeCCCCCcCCCC
Confidence            378999999999544

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=87.49  E-value=0.29  Score=40.24  Aligned_cols=15  Identities=53%  Similarity=0.678  Sum_probs=13.4

Q ss_pred             EEEecCcccccCccc
Q 026252           80 LLFDCDGVLVDTEKD   94 (241)
Q Consensus        80 ViFD~DGTLvd~~~~   94 (241)
                      |+||+||||+++...
T Consensus         1 ~lfD~DGvL~~~~~~   15 (236)
T TIGR01460         1 FLFDIDGVLWLGHKP   15 (236)
T ss_pred             CEEeCcCccCcCCcc
Confidence            589999999999875

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=87.19  E-value=2.7  Score=35.70  Aligned_cols=19  Identities=47%  Similarity=0.669  Sum_probs=16.3

Q ss_pred             CCCcEEEEecCcccccCcc
Q 026252           75 VLPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~   93 (241)
                      ..++.+|||+||||...+.
T Consensus        20 ~~~DtfifDcDGVlW~g~~   38 (306)
T KOG2882|consen   20 DSFDTFIFDCDGVLWLGEK   38 (306)
T ss_pred             hhcCEEEEcCCcceeecCC
Confidence            4689999999999998655

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=86.96  E-value=1.5  Score=34.88  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=34.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l  213 (241)
                      .++.+.+.+.|++|+++|++++++|+.....+..+++.+
T Consensus        16 ~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~   54 (204)
T TIGR01484        16 HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL   54 (204)
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence            357799999999999999999999999999999888863

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=86.42  E-value=1.3  Score=43.54  Aligned_cols=41  Identities=20%  Similarity=0.229  Sum_probs=38.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~  555 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGID  555 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999999999885

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=86.13  E-value=1.3  Score=43.81  Aligned_cols=41  Identities=15%  Similarity=0.137  Sum_probs=38.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~  590 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD  590 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999999999884

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=86.04  E-value=1.6  Score=43.34  Aligned_cols=56  Identities=23%  Similarity=0.224  Sum_probs=45.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV  230 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~  230 (241)
                      -++.+++.+.++.|++.|+++.++|+.....+..+-+..|+...-+...++.+.++
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el  601 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAEL  601 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHh
Confidence            38899999999999999999999999999999999999986544320036667653

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=85.79  E-value=1.4  Score=43.66  Aligned_cols=41  Identities=24%  Similarity=0.184  Sum_probs=39.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.+++|++.|+++.++|+.+...+..+.+.+|+.
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~  590 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE  590 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            78899999999999999999999999999999999999884

>PRK06769 hypothetical protein; Validated

Probab=85.72  E-value=0.52  Score=36.79  Aligned_cols=18  Identities=22%  Similarity=0.276  Sum_probs=15.2

Q ss_pred             CCCCcEEEEecCcccccC
Q 026252           74 SVLPSALLFDCDGVLVDT   91 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~   91 (241)
                      |..|++|+||.||||.-+
T Consensus         1 ~~~~~~~~~d~d~~~~~~   18 (173)
T PRK06769          1 MTNIQAIFIDRDGTIGGD   18 (173)
T ss_pred             CCCCcEEEEeCCCcccCC
Confidence            367999999999999654

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=85.42  E-value=2.3  Score=39.82  Aligned_cols=18  Identities=17%  Similarity=0.337  Sum_probs=14.8

Q ss_pred             CCcEEEEecCcccccCcc
Q 026252           76 LPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~   93 (241)
                      .-|.||=|+||||..++.
T Consensus       529 n~kIVISDIDGTITKSDv  546 (738)
T KOG2116|consen  529 NDKIVISDIDGTITKSDV  546 (738)
T ss_pred             CCcEEEecCCCceEhhhh
Confidence            347899999999988774

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=85.31  E-value=0.51  Score=36.43  Aligned_cols=16  Identities=38%  Similarity=0.688  Sum_probs=11.8

Q ss_pred             cEEEEecCcccccCcc
Q 026252           78 SALLFDCDGVLVDTEK   93 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~   93 (241)
                      |.+.||+||||+.+..
T Consensus         1 Kia~fD~DgTLi~~~s   16 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKS   16 (159)
T ss_dssp             SEEEE-SCTTTEE-ST
T ss_pred             CEEEEeCCCCccCCCC
Confidence            5678999999998765

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=85.06  E-value=1.9  Score=41.63  Aligned_cols=55  Identities=24%  Similarity=0.311  Sum_probs=45.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCccc--ceEEecCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK--IQIFAGDVV  230 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~--~~iv~s~~~  230 (241)
                      +++|++.+.++.+++.|+++.++|+.....+..+.+.+|+...-+.  ...+++.|+
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~ef  640 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEF  640 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhh
Confidence            7899999999999999999999999999999999999986554431  134555543

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=84.93  E-value=0.73  Score=38.67  Aligned_cols=14  Identities=43%  Similarity=0.703  Sum_probs=12.2

Q ss_pred             cEEEEecCcccccC
Q 026252           78 SALLFDCDGVLVDT   91 (241)
Q Consensus        78 k~ViFD~DGTLvd~   91 (241)
                      .+|+||+||||++.
T Consensus        15 ~li~~D~DGTLl~~   28 (266)
T PRK10187         15 YAWFFDLDGTLAEI   28 (266)
T ss_pred             EEEEEecCCCCCCC
Confidence            57888999999984

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=84.70  E-value=1.9  Score=43.38  Aligned_cols=42  Identities=17%  Similarity=0.158  Sum_probs=39.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ++.||+.+.|+.|++.|+++.++|+.....+..+.+.+|+..
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~  687 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIP  687 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999999999999998853

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=84.53  E-value=0.98  Score=35.11  Aligned_cols=19  Identities=26%  Similarity=0.310  Sum_probs=16.3

Q ss_pred             CCCcEEEEecCcccccCcc
Q 026252           75 VLPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~   93 (241)
                      ..+++|++|+||||.....
T Consensus        23 ~~v~~vv~D~Dgtl~~~~~   41 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPDH   41 (170)
T ss_pred             CCCCEEEEecCCccccCCC
Confidence            4689999999999997654

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR00685 T6PP trehalose-phosphatase

Probab=84.32  E-value=0.61  Score=38.52  Aligned_cols=16  Identities=38%  Similarity=0.652  Sum_probs=13.4

Q ss_pred             CcEEEEecCcccccCc
Q 026252           77 PSALLFDCDGVLVDTE   92 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~   92 (241)
                      -.+++||+||||++..
T Consensus         3 ~~~l~lD~DGTL~~~~   18 (244)
T TIGR00685         3 KRAFFFDYDGTLSEIV   18 (244)
T ss_pred             cEEEEEecCccccCCc
Confidence            3688999999999853

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=84.21  E-value=7.2  Score=32.04  Aligned_cols=41  Identities=22%  Similarity=0.166  Sum_probs=34.0

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      ..++.||+.|.++.|.+. .+=+|+|.+....+..+...+|+
T Consensus        81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~  121 (315)
T COG4030          81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV  121 (315)
T ss_pred             hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence            368999999999999876 56667888877888888888876

>smart00540 LEM in nuclear membrane-associated proteins

Probab=84.11  E-value=1.2  Score=26.43  Aligned_cols=32  Identities=16%  Similarity=0.117  Sum_probs=28.8

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l  213 (241)
                      .|+.++|++.|++.|-||.+++...+..|..+
T Consensus         9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~~   40 (44)
T smart00540        9 AELRAELKQYGLPPGPITDTTRKLYEKKLRKL   40 (44)
T ss_pred             HHHHHHHHHcCCCCCCcCcchHHHHHHHHHHH
Confidence            38889999999999999999999998888765

LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=84.06  E-value=1.2  Score=38.42  Aligned_cols=40  Identities=15%  Similarity=0.137  Sum_probs=31.4

Q ss_pred             CCChhHHHHHHHHHHC----CCeEEEEeCCc---HHH-HHHHHHHhcC
Q 026252          176 PLRPGVAKLIDQALEK----GVKVAVCSTSN---EKA-VTAIVSFLLG  215 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~----gi~v~ivTn~~---~~~-~~~~l~~l~~  215 (241)
                      .+.||+.|+|+.|+++    |+++.++||+.   ... ++.+.+.+|.
T Consensus        16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~   63 (321)
T TIGR01456        16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV   63 (321)
T ss_pred             cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence            5689999999999998    99999999995   343 4444466654

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=84.00  E-value=0.76  Score=38.10  Aligned_cols=15  Identities=33%  Similarity=0.521  Sum_probs=12.9

Q ss_pred             EEEEecCcccccCcc
Q 026252           79 ALLFDCDGVLVDTEK   93 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~   93 (241)
                      .|+||+||||++...
T Consensus         1 li~~DlDGTll~~~~   15 (256)
T TIGR01486         1 WIFTDLDGTLLDPHG   15 (256)
T ss_pred             CEEEcCCCCCcCCCC
Confidence            378999999999875

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=83.34  E-value=2.6  Score=34.08  Aligned_cols=37  Identities=16%  Similarity=0.292  Sum_probs=31.2

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l  213 (241)
                      ..||+.|.++.|+++++++=.|||...+.-+.+.+++
T Consensus        24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL   60 (262)
T KOG3040|consen   24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL   60 (262)
T ss_pred             cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence            5699999999999999999999999766666666655

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=82.97  E-value=2.4  Score=42.52  Aligned_cols=41  Identities=20%  Similarity=0.211  Sum_probs=38.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.|++|+++|+++.++|+.....+..+.+.+|+.
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~  608 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  608 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            77999999999999999999999999999999999999875

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=82.24  E-value=3.7  Score=41.46  Aligned_cols=42  Identities=12%  Similarity=0.193  Sum_probs=39.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ++.|++.+.|+.|++.|+++.++|+.+...+..+.+..|+..
T Consensus       656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~  697 (1054)
T TIGR01657       656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVN  697 (1054)
T ss_pred             CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999999999999998764

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=81.21  E-value=7.2  Score=30.41  Aligned_cols=31  Identities=10%  Similarity=0.087  Sum_probs=22.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHH
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVT  207 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~  207 (241)
                      .+..+|...|..+++. .+++-+|.......+
T Consensus        72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~  102 (194)
T COG5663          72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTR  102 (194)
T ss_pred             HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHH
Confidence            3457788889999887 688888887544443

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=80.92  E-value=1.7  Score=35.79  Aligned_cols=27  Identities=26%  Similarity=0.436  Sum_probs=16.5

Q ss_pred             EEEEecCccccc---CccchHHHHHHHHHHh
Q 026252           79 ALLFDCDGVLVD---TEKDGHRISFNDTFKE  106 (241)
Q Consensus        79 ~ViFD~DGTLvd---~~~~~~~~a~~~~~~~  106 (241)
                      .|+.|+||||++   .+.. ....+.+++++
T Consensus         3 li~tDlDGTLl~~~~~~~~-~~~~~~~~i~~   32 (249)
T TIGR01485         3 LLVSDLDNTLVDHTDGDNQ-ALLRLNALLED   32 (249)
T ss_pred             EEEEcCCCcCcCCCCCChH-HHHHHHHHHHH
Confidence            466799999997   4432 33444444443

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein

Probab=80.52  E-value=4.1  Score=31.99  Aligned_cols=31  Identities=16%  Similarity=0.308  Sum_probs=26.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHH
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEK  204 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~  204 (241)
                      ++.+++++.++++.+++.|+.+.+.||+...
T Consensus        72 EPll~~~l~~li~~~~~~g~~v~i~TNg~~~  102 (191)
T TIGR02495        72 EPTLQAGLPDFLRKVRELGFEVKLDTNGSNP  102 (191)
T ss_pred             cccCcHhHHHHHHHHHHCCCeEEEEeCCCCH
Confidence            3667788899999999999999999999643

This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=80.01  E-value=2.8  Score=42.27  Aligned_cols=43  Identities=21%  Similarity=0.182  Sum_probs=38.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~  218 (241)
                      ++.|||.+.|+.|++.|+++.++|+...+.+..+.+..|+...
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~  673 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSR  673 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCC
Confidence            7899999999999999999999999998999998888876543

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	241
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	7e-26
1te2_A	226	Putative phosphatase; structural genomics, phospha	3e-24
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	3e-23
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	2e-22
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	3e-22
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	8e-22
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	2e-21
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	6e-21
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	6e-21
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	4e-19
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	1e-18
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	3e-18
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	5e-18
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	1e-16
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	8e-16
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	8e-16
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	9e-14
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	7e-13
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	2e-12
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	8e-12
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	1e-11
2hsz_A	243	Novel predicted phosphatase; structural genomics,	2e-10
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	3e-10
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	1e-09
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	4e-09
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	3e-08
2zg6_A	220	Putative uncharacterized protein ST2620, probable	2e-07
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	2e-07
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	5e-07
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	2e-06
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	4e-06
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	1e-05
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	3e-05
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	2e-04
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	3e-04
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	4e-04
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	4e-04
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	6e-04
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	7e-04
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	8e-04
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	8e-04

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233

 Score =  100 bits (250), Expect = 7e-26
 Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 26/176 (14%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL 121
           MS+R             + +FD DG L D+    +  ++ +        +   +      
Sbjct: 1   MSLRPQT----------SFIFDLDGTLTDSVYQ-NVAAWKEAL--DAENIPLAMWRIHRK 47

Query: 122 LKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGV 181
             IG     M    ++      + +DE+        L ++  + +  L  +  +   PG 
Sbjct: 48  --IGMSGGLMLKSLSR--ETGMSITDEQ-----AERLSEKHAQAYERLQHQ--IIALPGA 96

Query: 182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            +L++   ++ +K  + ++      T  +  L          I   D V   KPDP
Sbjct: 97  VELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSYGKPDP 150

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226

 Score = 95.4 bits (238), Expect = 3e-24
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 72  SASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM 131
           S      A +FD DG+L+D+E      +  D      LGV         L    G +  M
Sbjct: 4   STPRQILAAIFDMDGLLIDSEPL-WDRAELDVM--ASLGVDISRRNE--LPDTLGLRIDM 58

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK 191
                    P   PS +E        + +R     + L+E+   PL PGV + +    E+
Sbjct: 59  VVDLWYARQPWNGPSRQE--------VVERVIARAISLVEET-RPLLPGVREAVALCKEQ 109

Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----IFAGDVVPRKKPDP 237
           G+ V + S S    +  ++         +       + + + +P  KP P
Sbjct: 110 GLLVGLASASPLHMLEKVL------TMFDLRDSFDALASAEKLPYSKPHP 153

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243

 Score = 93.5 bits (233), Expect = 3e-23
 Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 23/164 (14%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
            ++FD DGV+ DT    H  ++       E+G++ D      L   G  ++       + 
Sbjct: 7   GVIFDLDGVITDTAH-LHFQAWQQIA--AEIGISIDAQFNESL--KGISRDESLRRILQH 61

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKK-LLPLRPGVAKLIDQALEKGVKVAV 197
           G  E   + +E      A L  RK  L++  + +  +  + PG+  L+     + + V +
Sbjct: 62  GGKEGDFNSQE-----RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDP 237
            S S           +L     E  + F        +   KPDP
Sbjct: 117 ASVS------LNAPTIL--AALELREFFTFCADASQLKNSKPDP 152

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243

 Score = 90.8 bits (226), Expect = 2e-22
 Identities = 29/159 (18%), Positives = 59/159 (37%), Gaps = 15/159 (9%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGVL ++    H  +++     K  G+    +        G           + 
Sbjct: 26  AVLFDMDGVLFNSMP-YHSEAWHQVM--KTHGLDLSREEAYMH--EGRTGASTINIVFQR 80

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
              ++A  +E E       ++  K+ LF    E       PG  +L+ +   +G+   V 
Sbjct: 81  ELGKEATQEEIES------IYHEKSILFNSYPE---AERMPGAWELLQKVKSEGLTPMVV 131

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S + ++   +         +++ +     V   KP+P
Sbjct: 132 TGSGQLSLLERLEHNFPGMFHKEL-MVTAFDVKYGKPNP 169

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233

 Score = 90.4 bits (225), Expect = 3e-22
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 23/164 (14%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A++FD DGV+ DT +  H +++      +++ + +D D+   L   G  +E         
Sbjct: 4   AVIFDLDGVITDTAE-YHFLAWKHIA--EQIDIPFDRDMNERL--KGISREESLESILIF 58

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-LPLRPGVAKLIDQALEKGVKVAV 197
           G  E   ++ E        L  RK   + +LI K     L PG+ +L+ Q   + +K+ +
Sbjct: 59  GGAETKYTNAE-----KQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGL 113

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIF----AGDVVPRKKPDP 237
            S+S           +L   R   I  F        + + KPDP
Sbjct: 114 ASSS------RNAPKIL--RRLAIIDDFHAIVDPTTLAKGKPDP 149

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247

 Score = 89.7 bits (223), Expect = 8e-22
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 17/160 (10%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGVL D+    H  S++     K  G     +        G          ++ 
Sbjct: 25  AVLFDMDGVLFDSMP-NHAESWHKIM--KRFGFGLSREEAYMH--EGRTGASTINIVSRR 79

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                A  +E +       +++ KTE F    +       PG  +++ +   +G+   V 
Sbjct: 80  ERGHDATEEEIKA------IYQAKTEEFNKCPK---AERMPGALEVLTKIKSEGLTPMVV 130

Query: 199 STS-NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + S     +  +     G  +A    +     V   KP+P
Sbjct: 131 TGSGQTSLLDRLNHNFPGIFQAN--LMVTAFDVKYGKPNP 168

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214

 Score = 86.5 bits (215), Expect = 6e-21
 Identities = 28/166 (16%), Positives = 63/166 (37%), Gaps = 31/166 (18%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A++FD DGVL DTEK  +         +   G++ D         IGG  +++     + 
Sbjct: 7   AIIFDMDGVLFDTEKY-YYDRRASFLGQ--KGISIDHLPPSFF--IGGNTKQVWENILRD 61

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
            + +             ++L +                + P V K++++   +G+++ + 
Sbjct: 62  EYDKWDV----------STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLA 111

Query: 199 STSNEKAVTAIVSFLLGPERAEKIQIF-------AGDVVPRKKPDP 237
           S+S +  +   +         E+ ++        +G+     KP+P
Sbjct: 112 SSSVKADIFRAL---------EENRLQGFFDIVLSGEEFKESKPNP 148

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221

 Score = 86.5 bits (215), Expect = 6e-21
 Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 38/171 (22%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGV+ DT +  H  ++      +E+G+      + E LK G  +E         
Sbjct: 4   AVLFDLDGVITDTAE-YHFRAWKALA--EEIGINGVDRQFNEQLK-GVSREDSLQKILDL 59

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL-LPLRPGVAKLIDQALEKGVKVAV 197
              +   S EE        L KRK + ++ +I+      + PG+ +L+       +K+A+
Sbjct: 60  ADKK--VSAEE-----FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIAL 112

Query: 198 CSTS-NEKAV----------TAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            S S N   +           AI                    V   KP P
Sbjct: 113 ASASKNGPFLLERMNLTGYFDAIAD---------------PAEVAASKPAP 148

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250

 Score = 82.4 bits (204), Expect = 4e-19
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 20/184 (10%)

Query: 57  SSANPMSMRNVRVTCSASVLP--SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
           SS   +   N+     A+     + L+FD DG+L+DTE+  + + F +          + 
Sbjct: 8   SSGVDLGTENLYFQSMAAPPQPVTHLIFDMDGLLLDTERL-YSVVFQEIC--NRYDKKYS 64

Query: 115 VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL 174
            D+   +  +G                 + P  +EE       L +        +     
Sbjct: 65  WDVKSLV--MGKKALEAAQIIIDVL---QLPMSKEE-------LVEESQTKLKEVFPT-- 110

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-VPRK 233
             L PG  KLI    + G+  A+ ++S   +     S            +   D  V   
Sbjct: 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHG 170

Query: 234 KPDP 237
           KPDP
Sbjct: 171 KPDP 174

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259

 Score = 81.3 bits (201), Expect = 1e-18
 Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 19/185 (10%)

Query: 54  RRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW 113
              SS   +   N+           A+LFD DGVLV++E       +       E G+  
Sbjct: 5   HHHSSGVDLGTENLYFQSMPDAPFDAVLFDLDGVLVESEGI-IAQVWQSVL--AERGLHL 61

Query: 114 DVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKK 173
           D+         G   + + AY            D      F+  L  R            
Sbjct: 62  DLTEIAMYF-TGQRFDGVLAYL-------AQQHDFVPPPDFLDVLETRFNAAM------T 107

Query: 174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG-PERAEKIQIFAGDVVPR 232
            +    G A+ +      GV  A+ S S    +   +  + G  E A +       V  R
Sbjct: 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR-VAGLTELAGEHIYDPSWVGGR 166

Query: 233 KKPDP 237
            KP P
Sbjct: 167 GKPHP 171

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277

 Score = 80.4 bits (198), Expect = 3e-18
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 13/167 (7%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL+ D  G  +D        +F + F  K+ G+        E   +G  K          
Sbjct: 16  ALILDWAGTTIDFGSLAPVYAFMELF--KQEGIEVTQAEAREP--MGTEKSEHIRRMLGN 71

Query: 139 G-----WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                 W         E  + I  L+     +   ++ ++   + PG  ++ D+ + +G+
Sbjct: 72  SRIANAWLSIKGQASNE--EDIKRLYDLFAPIQTRIVAQRSQLI-PGWKEVFDKLIAQGI 128

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC 240
           KV    T     + A        +            V R +P P   
Sbjct: 129 KVGGN-TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMA 174

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267

 Score = 79.6 bits (196), Expect = 5e-18
 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 33/186 (17%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD------- 114
           M    +           A++F   G  VD         F + F ++ + +T +       
Sbjct: 1   MDRMKIE----------AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMG 50

Query: 115 ---VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
              +D    L ++          F +           EE ++ + ++  R          
Sbjct: 51  LLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPI----- 105

Query: 172 KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP 231
                   GV ++I    E+G+K+   +    + +  +       +  +   +   D VP
Sbjct: 106 -------NGVKEVIASLRERGIKIGSTTGYTREMMDIVAK-EAALQGYKPDFLVTPDDVP 157

Query: 232 RKKPDP 237
             +P P
Sbjct: 158 AGRPYP 163

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275

 Score = 76.3 bits (188), Expect = 1e-16
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 28/187 (14%)

Query: 52  VSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV 111
            ++       M +     T   S+  +A LFD DG ++ ++       + D    K+   
Sbjct: 14  TTKANIQTIAMPLT----TKPLSLKINAALFDVDGTIIISQP-AIAAFWRDFG--KDKPY 66

Query: 112 TWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
                +       G       A F     P+ A  +   +      L     E +     
Sbjct: 67  FDAEHVIHIS--HGWRTYDAIAKFA----PDFADEEYVNK------LEGEIPEKY----- 109

Query: 172 KKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
            +     PG  KL +        K AV ++             L  +R E       + V
Sbjct: 110 GEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI-LKIKRPE--YFITANDV 166

Query: 231 PRKKPDP 237
            + KP P
Sbjct: 167 KQGKPHP 173

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229

 Score = 73.1 bits (180), Expect = 8e-16
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 24/162 (14%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNK 137
            ++FDCDGVLVD+E        +      E G    V+  GE    G   + +     ++
Sbjct: 6   LIIFDCDGVLVDSEII-AAQVESRLL--TEAGYPISVEEMGERF-AGMTWKNILLQVESE 61

Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
              P    +   ++ +          +L  + +E+  + +  GV   + +         +
Sbjct: 62  ASIPL--SASLLDKSE----------KLLDMRLERD-VKIIDGVKFALSRL---TTPRCI 105

Query: 198 CSTSNEKAVTAIVSFLLGPERAEKIQIFAGD--VVPRKKPDP 237
           CS S+   +  +++  +G +      I++       R KP P
Sbjct: 106 CSNSSSHRLDMMLT-KVGLKPYFAPHIYSAKDLGADRVKPKP 146

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231

 Score = 73.1 bits (180), Expect = 8e-16
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 33/183 (18%)

Query: 55  RTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
              +  P SM+             A++FD    L+DT  +  R +F       ++G    
Sbjct: 13  EAQTQGPGSMKQPT----------AVIFDWYNTLIDTSINIDRTTFYQVL--DQMGYKN- 59

Query: 115 VDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL 174
           +DL  + +      + +     K          +E    +  SL K          +   
Sbjct: 60  IDL--DSIPNSTIPKYLITLLGK--------RWKEATILYENSLEKS--------QKSDN 101

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234
             L  G  +L+D   E  + +A+ S  N + + + +         +   I         K
Sbjct: 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGTIK 159

Query: 235 PDP 237
           P P
Sbjct: 160 PSP 162

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209

 Score = 66.8 bits (164), Expect = 9e-14
 Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 27/161 (16%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL+FD DG L +++         +         +               ++ MT    + 
Sbjct: 6   ALMFDIDGTLTNSQPAYTT-VMREVLATYGKPFS-PAQAQKTF--PMAAEQAMT----EL 57

Query: 139 GWPEKAPSDEEERKQFIASL--HKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           G        +  + Q+   +  H  + EL+            PG+  L +  L   +++ 
Sbjct: 58  GIAA--SEFDHFQAQYEDVMASHYDQIELY------------PGITSLFE-QLPSELRLG 102

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           + ++     + + +       R       + D  P++KPDP
Sbjct: 103 IVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRKPDP 141

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190

 Score = 64.1 bits (157), Expect = 7e-13
 Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 30/162 (18%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
             ++D  G L+D  +     +F +T      G+T D D   +   +          F   
Sbjct: 8   DYIWDLGGTLLDNYETSTA-AFVETL--ALYGITQDHDSVYQA--LKVSTPFAIETF--- 59

Query: 139 GWPEKAPSDEEERKQFIA--SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
                AP+ E   +++    +       LF             GV+ L++    +G +  
Sbjct: 60  -----APNLENFLEKYKENEARELEHPILF------------EGVSDLLEDISNQGGRHF 102

Query: 197 VCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
           + S  N++ +  +    +        ++       ++KP+P 
Sbjct: 103 LVSHRNDQVLEILEKTSIAA-YFT--EVVTSSSGFKRKPNPE 141

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 29/163 (17%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK--IGGGKERMTAYFN 136
           A ++D DG L+D+  +       +TF +    + +D +   ++ +       + +     
Sbjct: 6   AFIWDLDGTLLDS-YEAILSGIEETFAQ--FSIPYDKE---KVREFIFKYSVQDLLVRV- 58

Query: 137 KTGWPEKAPSDE--EERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
                ++    E   + +    +    +  L             PG  +++  A E G++
Sbjct: 59  ---AEDRNLDVEVLNQVRAQSLAEKNAQVVLM------------PGAREVLAWADESGIQ 103

Query: 195 VAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             + +     A T +    +     E   I        +KP P
Sbjct: 104 QFIYTHKGNNAFTILKDLGVESYFTE---ILTSQSGFVRKPSP 143

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225

 Score = 61.8 bits (151), Expect = 8e-12
 Identities = 28/165 (16%), Positives = 49/165 (29%), Gaps = 28/165 (16%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-TWDVDLYGELLKIGGGKERMTAYFNK 137
             LFD D  L D+ +      F      +  G      D+      IG   E        
Sbjct: 8   VYLFDFDYTLADSSRGIVT-CFRSVL--ERHGYTGITDDMIKRT--IGKTLEESF----S 58

Query: 138 TGWPEKAPSDEEE-RKQFIA---SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
                      E  R+++           T LF            P     +    ++G+
Sbjct: 59  ILTGITDADQLESFRQEYSKEADIYMNANTILF------------PDTLPTLTHLKKQGI 106

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
           ++ + ST     + + +   +  +  +   I  G+ V   KPDP 
Sbjct: 107 RIGIISTKYRFRILSFLRNHMPDDWFD--IIIGGEDVTHHKPDPE 149

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222

 Score = 61.0 bits (149), Expect = 1e-11
 Identities = 40/163 (24%), Positives = 59/163 (36%), Gaps = 27/163 (16%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
            +LFD DG L+D+ KD    +   T KE  L   +  D   +   IGGG   +     + 
Sbjct: 5   VILFDLDGTLIDSAKDIAL-ALEKTLKELGLE-EYYPDNVTKY--IGGGVRALL----EK 56

Query: 139 GWPEKAPSDEEERKQFI---ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
              +K    EE  + F           T+ +            P +   ++    KG K+
Sbjct: 57  VLKDKF--REEYVEVFRKHYLENPVVYTKPY------------PEIPYTLEALKSKGFKL 102

Query: 196 AVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
           AV S   E+    I+  L      +   I  GD    KKP P 
Sbjct: 103 AVVSNKLEELSKKILDILNLSGYFD--LIVGGDTFGEKKPSPT 143

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 30/172 (17%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM--TAY 134
              + FD DG LV++  D    S N   K+  L      +L      IG G + +   A 
Sbjct: 23  FKLIGFDLDGTLVNSLPDLAL-SINSALKDVNLP-QASENLVMTW--IGNGADVLSQRAV 78

Query: 135 FNKTGWPEKAPSDEEE---RKQFIASLHK---RKTELFMVLIEKKLLPLRPGVAKLIDQA 188
                  EK  +++E    ++QF     +     + L+            P V + ++  
Sbjct: 79  DWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLY------------PNVKETLEAL 126

Query: 189 LEKGVKVAVCSTSN--EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
             +G  +AV   +N   K V  I++           ++  G  +P  KP P 
Sbjct: 127 KAQGYILAVV--TNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPEIKPHPA 174

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 16/169 (9%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM------- 131
           A +FD DG ++DT  D    + N  F++      + V+        G G           
Sbjct: 6   AAIFDMDGTILDTSADLTS-ALNYAFEQTGHRHDFTVEDIKNF--FGSGVVVAVTRALAY 62

Query: 132 TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLP---LRPGVAKLIDQA 188
            A  ++         DE+  +    +   R  E+F               PG+  L+   
Sbjct: 63  EAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNL 122

Query: 189 LEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            +KGVK+AV S    +AV  +V  L  P   +           R+KP P
Sbjct: 123 RQKGVKLAVVSNKPNEAVQVLVEELF-PGSFD--FALGEKSGIRRKPAP 168

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 24/177 (13%), Positives = 47/177 (26%), Gaps = 46/177 (25%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGEL 121
           MS+  ++            +FD DG L     D   I        + L +  + D+   L
Sbjct: 1   MSLSEIK----------HWVFDMDGTLTIAVHDFAAI-------REALSIPAEDDILTHL 43

Query: 122 LKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGV 181
                              P    + +            + +               PG 
Sbjct: 44  ----------------AALPADESAAKHAWLLEHERDLAQGSRPA------------PGA 75

Query: 182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
            +L+ +   +G ++ +  T N + +  +    +G           G      KP P 
Sbjct: 76  VELVRELAGRGYRLGIL-TRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPG 131

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234

 Score = 54.3 bits (131), Expect = 4e-09
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 17/164 (10%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYGELLKIGGGKERMTAY 134
            + +LFD DG L+  E    R    D   E     G T   D  G++   G     +   
Sbjct: 4   RTLVLFDIDGTLLKVESMNRR-VLADALIEVYGTEGSTGSHDFSGKM--DGAIIYEV--- 57

Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-V 193
            +  G          E         +    LF     ++ + L  GV +L+D    +  V
Sbjct: 58  LSNVGLE------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDV 111

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
            + + + + E +    +  L G +       FA D    +   P
Sbjct: 112 LLGLLTGNFEASGRHKLK-LPGIDHYFPFGAFA-DDALDRNELP 153

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 51.8 bits (125), Expect = 3e-08
 Identities = 23/170 (13%), Positives = 47/170 (27%), Gaps = 41/170 (24%)

Query: 79  ALLFDCDGVLVDTEKDGHRI--SFNDTFKEKELGV-TWDVDLYGELLKIGGG-KERMTAY 134
            +LFD DG L D+ +    I  S   +    +  +   D+    +   +G   K     Y
Sbjct: 6   YVLFDLDGTLTDSAEG---ITKSVKYSL--NKFDIQVEDLSSLNKF--VGPPLKTSFMEY 58

Query: 135 FNKTGWPEKAPSDEEERKQFIASLHKR-------KTELFMVLIEKKLLPLRPGVAKLIDQ 187
           +           DEE     I             + +++             G+  L+  
Sbjct: 59  Y---------NFDEETATVAIDYYRDYFKAKGMFENKVY------------DGIEALLSS 97

Query: 188 ALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
             + G  + V ++        I+         +   I    +  +     
Sbjct: 98  LKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKLSTKE 145

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 25/175 (14%), Positives = 46/175 (26%), Gaps = 42/175 (24%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+L D    LV  +              K+ G   D+                       
Sbjct: 5   AVLVDFGNTLVGFKPV-FYEKVYQVL--KDNGYDLDLRKV---------FRAYAKAMGMI 52

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTE-----LFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
            +P++   +  + K F+  L    +E     L    I      L     + ++     G 
Sbjct: 53  NYPDEDGLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGY 112

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKI-----------QIFAGDVVPRKKPDP 237
           K+A+   SN               R + +            +     +   KP+P
Sbjct: 113 KLALV--SN------------ASPRVKTLLEKFDLKKYFDALALSYEIKAVKPNP 153

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 23/188 (12%), Positives = 56/188 (29%), Gaps = 51/188 (27%)

Query: 60  NPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRI--SFNDTFKEKELGVTWDVDL 117
           N M                 +LFD DG L D ++    I  S   +      G+  D++ 
Sbjct: 23  NAMKKN-----------YEIVLFDLDGTLTDPKEG---ITKSIQYSLNS--FGIKEDLE- 65

Query: 118 YGELLK-IGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA-------SLHKRKTELFMVL 169
              L + IG         +           ++++ K+ +             + +++   
Sbjct: 66  --NLDQFIGPPLHDTFKEY--------YKFEDKKAKEAVEKYREYFADKGIFENKIY--- 112

Query: 170 IEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV 229
                      + ++++   + G  + V ++        I+      +R  K  I   ++
Sbjct: 113 ---------ENMKEILEMLYKNGKILLVATSKPTVFAETILR-YFDIDRYFKY-IAGSNL 161

Query: 230 VPRKKPDP 237
              +    
Sbjct: 162 DGTRVNKN 169

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 47.9 bits (115), Expect = 5e-07
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 40/169 (23%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGV-TWDVDLYGELLKIGGG-KERMTAYFN 136
           A+ FD DG LVD+    H  +F  TFKE  LGV + D         +G   +        
Sbjct: 6   AIFFDLDGTLVDSSIGIHN-AFTYTFKE--LGVPSPDAKTIRGF--MGPPLESSFATCL- 59

Query: 137 KTGWPEKAPSDEEERKQFIA-------SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
                      +++  + +        +    + +LF            P +  L++  L
Sbjct: 60  ----------SKDQISEAVQIYRSYYKAKGIYEAQLF------------PQIIDLLE-EL 96

Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPL 238
                + + +T +      +   L      +   I+        K D +
Sbjct: 97  SSSYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPEAPHKADVI 143

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 26/201 (12%), Positives = 55/201 (27%), Gaps = 44/201 (21%)

Query: 48  SRLNVSRRTSSANPMSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK 107
           S +++         M  + ++           LL D  GVL++                 
Sbjct: 9   SGVDLGTENLYFQSMKSKGIK----------NLLIDLGGVLIN----------------- 41

Query: 108 ELGVTWDVD-LYGELLKIGGG--KERMTAYFNKTGWPE---KAPSDEEERKQFIASLHKR 161
                 D +       KIG    +E+   +     + +      +  E R      + K 
Sbjct: 42  -----LDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKM 96

Query: 162 KT-ELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE 220
            + +         L+ +      L+   L +   V + S +N+     +          +
Sbjct: 97  VSDKQIDAAWNSFLVDIPTYKLDLL-LKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFK 155

Query: 221 KIQIFAGDV----VPRKKPDP 237
               F        +   KP+P
Sbjct: 156 VEDYFEKTYLSYEMKMAKPEP 176

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 35/183 (19%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKE--KELGVTWDVDLYG 119
           M + + +          AL FDC G L+D E         +  +   K  G T+  D   
Sbjct: 1   MQLTDFK----------ALTFDCYGTLIDWET-----GIVNALQPLAKRTGKTFTSDELL 45

Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK-----KL 174
           E+       ++             A   +  R  +     +   E      E+     K 
Sbjct: 46  EVFGRNESPQQ--------TETPGALYQDILRAVYDRIAKEWGLEPDAAEREEFGTSVKN 97

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK 234
            P  P   + + Q L+K  K+ + S  +        + L          I     V   K
Sbjct: 98  WPAFPDTVEAL-QYLKKHYKLVILSNIDRNEFKLSNAKLGVEFDH----IITAQDVGSYK 152

Query: 235 PDP 237
           P+P
Sbjct: 153 PNP 155

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 25/173 (14%), Positives = 47/173 (27%), Gaps = 31/173 (17%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK---------IGGGKE 129
            + FD    L+D          +   K   L +    +   E+               ++
Sbjct: 6   LVTFDVWNTLLDLNIMLDEF-SHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRK 64

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
            +T          K   +  +R    A L+  ++ +              G  + +    
Sbjct: 65  VLTGSQEALAGKLKVDVELVKRATARAILNVDESLVL------------EGTKEALQFVK 112

Query: 190 EKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IFAGDVVPRKKPDP 237
           E+G+K AV    N   +    S+         +       F  D V   KP  
Sbjct: 113 ERGLKTAVI--GN--VMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRK 161

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 20/178 (11%), Positives = 44/178 (24%), Gaps = 35/178 (19%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVT-------------------WDVDLYG 119
            L +D    L+          +    +   L V                     +  L  
Sbjct: 3   LLTWDVKDTLLRLRHPLGEA-YATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSH 61

Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRP 179
            L       + +   F+  G  +         + +    H    ++              
Sbjct: 62  GLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVL------------D 109

Query: 180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDP 237
           G    + +   +G+++AV S  + +    +    L         +   +     KPDP
Sbjct: 110 GAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDF---VLTSEAAGWPKPDP 164

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231

 Score = 40.6 bits (94), Expect = 2e-04
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 15/125 (12%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
               LFDCD  L+D +     +      +E     +       E L+   G         
Sbjct: 11  DIVFLFDCDNTLLDNDHVLADL-RAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQ 69

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA 196
           +     + P D          +                  + PG    +     +G    
Sbjct: 70  RYR--LEQPRDTRLLLMSSFLIDYPFAS-----------RVYPGALNALRHLGARG-PTV 115

Query: 197 VCSTS 201
           + S  
Sbjct: 116 ILSDG 120

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384

 Score = 40.5 bits (94), Expect = 3e-04
 Identities = 29/179 (16%), Positives = 51/179 (28%), Gaps = 39/179 (21%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERM----- 131
               L   D V V      +  +  + F   EL V+ D  L+     +    + +     
Sbjct: 130 EQLPLQFLDNVKVGKN---NIYAALEEFATTELHVS-DATLFSLKGALWTLAQEVYQEWY 185

Query: 132 --TAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQAL 189
             +  +      EK  +    +  +I               E  L P+   V  L++   
Sbjct: 186 LGSKLYEDV---EKKIARTTFKTGYIYQ-------------EIILRPV-DEVKVLLNDLK 228

Query: 190 EKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVV----------PRKKPDP 237
             G ++ + +             L L P         A DV+          P  KP+P
Sbjct: 229 GAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNP 287

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 23/127 (18%)

Query: 77  PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
               +FD   V+VD       I FN                + +L +I     +  ++  
Sbjct: 7   KMLYIFDLGNVIVD-------IDFNRVLGA-----------WSDLTRIPLASLK-KSFHM 47

Query: 137 KTGWPEK---APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEKG 192
              + +      SDE   +     +    + E F    +   + LRP V  ++ +  E+G
Sbjct: 48  GEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQG 107

Query: 193 VKVAVCS 199
            +V V S
Sbjct: 108 HRVVVLS 114

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 41/175 (23%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKE---KELGVTWDVDLYGELLKIGGGKERMTAYF 135
            + FD D  LVDT K    I+  +  +      L V ++   Y EL+++           
Sbjct: 4   VIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFE-TAYSELIEL----------- 50

Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLPLRPGVAKLIDQALEKG 192
            K          +   ++     + +     ++         L   PG  K++ +  E G
Sbjct: 51  IKEYGSNFPYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELG 110

Query: 193 VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ----------IFAGDVVPRKKPDP 237
            ++ + +  N                 EKI           +   D    KKP P
Sbjct: 111 YELGIITDGNPVKQW------------EKILRLELDDFFEHVIISDFEGVKKPHP 153

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 34/170 (20%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVD-LYGELLKIGGGK-ERMTAYFN 136
            ++FD  GVL+                        + +        IG    E M   + 
Sbjct: 7   NIVFDLGGVLIH----------------------LNREESIRRFKAIGVADIEEMLDPYL 44

Query: 137 KTGWPEK----APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEK 191
           + G          S+EE R +    + K  T +     +   L  +       I  +L  
Sbjct: 45  QKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYI-DSLRP 103

Query: 192 GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV----VPRKKPDP 237
             ++ + S +N   +   +S    P        F        + + KP+ 
Sbjct: 104 DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNE 153

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196

 Score = 38.4 bits (89), Expect = 7e-04
 Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 7/62 (11%)

Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
            L PG    +    ++G+  A      E   T + + +   +      + A        P
Sbjct: 36  QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV--NDW-----MIAAPRPTAGWP 88

Query: 236 DP 237
            P
Sbjct: 89  QP 90

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 26/125 (20%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           AL +D  GVL+                       WD +   ++ +  G         ++ 
Sbjct: 6   ALFWDIGGVLLTNG--------------------WDREQRADVAQRFGLDTDDFTERHRL 45

Query: 139 GWPEK---APSDEEERKQFIASLHKRKT-ELFMVLIEKKLLPLRPGVAKLIDQALEKGVK 194
             PE      +  E  +Q +    +  T E F  ++E++  P RP V  L    L +  +
Sbjct: 46  AAPELELGRMTLAEYLEQVVFYQPRDFTPEDFRAVMEEQSQP-RPEVLALARD-LGQRYR 103

Query: 195 VAVCS 199
           +   +
Sbjct: 104 MYSLN 108

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 36/182 (19%)

Query: 64  MRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK--ELGVTWDVDL--YG 119
           M  ++           + FD  G L D          ++ F  +  E+   W      Y 
Sbjct: 1   MDYIK----------GIAFDLYGTLFDV--HSVVGRCDEAFPGRGREISALWRQKQLEYT 48

Query: 120 ELLKIGGG---KERMTAY-FNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLL 175
            L  +       ++ T      T        D   R     +  +              L
Sbjct: 49  WLRSLMNRYVNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLR--------------L 94

Query: 176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP 235
                V   + +   +G+K+A+ S  + +++ A+VS     +  +   + + D V   KP
Sbjct: 95  APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKP 152

Query: 236 DP 237
           D 
Sbjct: 153 DN 154

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	241
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.89
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.86
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.84
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.83
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.81
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.81
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.78
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.78
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.77
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.77
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.76
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.76
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.76
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.76
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.75
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.75
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.75
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.75
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.75
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.75
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.75
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.74
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.73
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.73
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.73
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.71
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.7
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.69
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.69
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.68
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.68
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.67
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.67
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.67
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.66
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.66
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.66
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.66
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.64
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.64
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.64
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.64
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.64
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.63
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.61
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.61
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.61
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.6
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.59
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.59
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.59
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.58
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.57
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.57
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.57
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.56
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.54
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.53
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.53
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.52
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.52
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.5
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.5
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.5
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.47
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.44
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.43
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.43
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.43
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.37
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.34
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.33
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.33
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.3
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.3
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.29
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.23
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.21
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.18
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.17
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.16
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.12
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.06
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.03
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.02
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.01
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	98.93
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.93
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.85
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.82
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.81
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.78
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.77
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.75
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.71
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	98.14
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	98.62
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.62
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	98.61
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.58
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	98.56
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.55
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.53
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	98.53
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.49
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	98.49
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.48
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.39
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.38
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	98.34
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.33
4gxt_A	385	A conserved functionally unknown protein; structur	98.33
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	98.29
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.25
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	98.19
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.15
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	98.14
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.14
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.12
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	98.04
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.97
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	97.96
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	97.94
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	97.92
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.82
3dao_A	283	Putative phosphatse; structural genomics, joint ce	97.79
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	97.79
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	97.76
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	97.71
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	97.68
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	97.66
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	97.61
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	97.6
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.58
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	97.53
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.43
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	97.38
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	97.31
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	97.29
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	97.26
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	97.17
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	97.13
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	97.09
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	96.9
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	96.4
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	96.39
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	96.3
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	96.1
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	95.05
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	94.98
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	94.53
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	94.44
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	94.14
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	93.86
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	93.2
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	93.06
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	91.48
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	90.88
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	90.61
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	90.51
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	89.73
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	88.62
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	87.97
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	87.29
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	86.34
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	85.48
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	85.03
2o2x_A	218	Hypothetical protein; structural genomics, joint c	84.03
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	83.99
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	82.48
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	81.68
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	80.01

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.89  E-value=1.4e-22  Score=162.59  Aligned_cols=145  Identities=23%  Similarity=0.275  Sum_probs=109.8

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  155 (241)
                      ||+||||+||||+|+.+. +..+|+++++++|.+..  .+.+...  .+........... .....    .   ..+++.
T Consensus         1 IkAViFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~----~---~~~~~~   68 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPL-YFEAYRRVAESYGKPYT--EDLHRRI--MGVPEREGLPILMEALEIK----D---SLENFK   68 (216)
T ss_dssp             CCEEEEESBTTTBCCGGG-HHHHHHHHHHHTTCCCC--HHHHHHH--TTSCHHHHHHHHHHHTTCC----S---CHHHHH
T ss_pred             CeEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hccchhhhhhhhhhcccch----h---hHHHHH
Confidence            689999999999999985 88899999999987643  4555544  5565555544333 22221    1   122333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP  235 (241)
                      ..+.+...+.+..    . ..++||+.++|+.|+++|++++++||+.+..+...++.+|+.++|+  .++++++++..||
T Consensus        69 ~~~~~~~~~~~~~----~-~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd--~~~~~~~~~~~KP  141 (216)
T 3kbb_A           69 KRVHEEKKRVFSE----L-LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD--VMVFGDQVKNGKP  141 (216)
T ss_dssp             HHHHHHHHHHHHH----H-CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECGGGSSSCTT
T ss_pred             HHHHHHHHHHHHH----h-cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccc--ccccccccCCCcc
Confidence            3333333332222    2 6889999999999999999999999999999999999999999999  8999999999999


Q ss_pred             CCCCC
Q 026252          236 DPLCC  240 (241)
Q Consensus       236 ~p~~f  240 (241)
                      +|++|
T Consensus       142 ~p~~~  146 (216)
T 3kbb_A          142 DPEIY  146 (216)
T ss_dssp             STHHH
T ss_pred             cHHHH
Confidence            99886

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.86  E-value=1.2e-21  Score=160.90  Aligned_cols=152  Identities=20%  Similarity=0.254  Sum_probs=107.9

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (241)
                      +|+||+||||+||||+|+++. +..+|+++++++|.+.+.  +....+  .|.+.....+.+. ..+...  ........
T Consensus         2 ~MkiKaViFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~~~--~~~~~~~~   74 (243)
T 4g9b_A            2 VMKLQGVIFDLDGVITDTAHL-HFQAWQQIAAEIGISIDA--QFNESL--KGISRDESLRRILQHGGKEG--DFNSQERA   74 (243)
T ss_dssp             CCCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCCT--TGGGGG--TTCCHHHHHHHHHHHTTCGG--GCCHHHHH
T ss_pred             CccCcEEEEcCCCcccCCHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--cCCCHHHHHHHHHHHhhccc--chhHHHHH
Confidence            467999999999999999985 888999999999987553  333332  4555555544443 322211  11222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~-~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~  231 (241)
                          ....+....+...... ....++||+.++++.|+++|++++++||+.  ....+++.+|+.++|+  .++++++++
T Consensus        75 ----~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd--~i~~~~~~~  146 (243)
T 4g9b_A           75 ----QLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFT--FCADASQLK  146 (243)
T ss_dssp             ----HHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCS--EECCGGGCS
T ss_pred             ----HHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccc--ccccccccc
Confidence                2222333333333332 224689999999999999999999999986  3567899999999999  899999999


Q ss_pred             CCCCCCCCC
Q 026252          232 RKKPDPLCC  240 (241)
Q Consensus       232 ~~KP~p~~f  240 (241)
                      ..||+|++|
T Consensus       147 ~~KP~p~~~  155 (243)
T 4g9b_A          147 NSKPDPEIF  155 (243)
T ss_dssp             SCTTSTHHH
T ss_pred             CCCCcHHHH
Confidence            999999987

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.84  E-value=5.3e-21  Score=157.54  Aligned_cols=152  Identities=20%  Similarity=0.302  Sum_probs=107.9

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      .|+|+||||+||||+|+.+. +..+|+++++++|.+.+.  +....+  .+.......+.+...... .....+.....+
T Consensus        24 ~MIKaViFDlDGTLvDs~~~-~~~a~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   97 (250)
T 4gib_A           24 AMIEAFIFDLDGVITDTAYY-HYMAWRKLAHKVGIDIDT--KFNESL--KGISRMESLDRILEFGNK-KYSFSEEEKVRM   97 (250)
T ss_dssp             CCCCEEEECTBTTTBCCHHH-HHHHHHHHHHTTTCCCCT--TGGGGT--TTCCHHHHHHHHHHHTTC-TTTSCHHHHHHH
T ss_pred             chhheeeecCCCcccCCHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--hCcchHHHHHHhhhhhcC-CCCCCHHHHHHH
Confidence            67999999999999999985 888999999999987653  222222  445554444444332211 112233333333


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~-~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                          .+...+.|...... ....++||+.++++.|+++|++++++|+..  .+...++.+|+.++|+  .++++++++..
T Consensus        98 ----~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd--~i~~~~~~~~~  169 (250)
T 4gib_A           98 ----AEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFD--FIADAGKCKNN  169 (250)
T ss_dssp             ----HHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCS--EECCGGGCCSC
T ss_pred             ----HHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccc--eeecccccCCC
Confidence                33334444444332 224689999999999999999999887764  4567899999999999  89999999999


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       170 KP~p~~~  176 (250)
T 4gib_A          170 KPHPEIF  176 (250)
T ss_dssp             TTSSHHH
T ss_pred             CCcHHHH
Confidence            9999886

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.83  E-value=3.3e-20  Score=151.52  Aligned_cols=154  Identities=21%  Similarity=0.234  Sum_probs=107.6

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHh--------------cCCC
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK--------------TGWP  141 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~  141 (241)
                      ++|+|+||+||||+|+.+. +..+++++++++|.......+.+...  .+.+.......+..              ..+.
T Consensus         3 ~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (240)
T 2hi0_A            3 KYKAAIFDMDGTILDTSAD-LTSALNYAFEQTGHRHDFTVEDIKNF--FGSGVVVAVTRALAYEAGSSRESLVAFGTKDE   79 (240)
T ss_dssp             SCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTSCCCCCHHHHHHH--CSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTC
T ss_pred             cccEEEEecCCCCccCHHH-HHHHHHHHHHHcCCCCCCCHHHHHHh--cCccHHHHHHHHHHhccccccccccccccccc
Confidence            5899999999999999985 77899999999987612234555443  56555444433320              0000


Q ss_pred             C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          142 E-KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       142 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      . ......+..+++    .+.+.+.|..... ....++||+.++|+.|+++|++++|+||+....++..++.+++. +|+
T Consensus        80 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~  153 (240)
T 2hi0_A           80 QIPEAVTQTEVNRV----LEVFKPYYADHCQ-IKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD  153 (240)
T ss_dssp             CCCTTCCHHHHHHH----HHHHHHHHHHTSS-SSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS
T ss_pred             ccCCCCCHHHHHHH----HHHHHHHHHHhhh-hcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee
Confidence            0 001123333322    2333333333211 23678999999999999999999999999999999999999887 898


Q ss_pred             cceEEecCCCCCCCCCCCCC
Q 026252          221 KIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       221 ~~~iv~s~~~~~~KP~p~~f  240 (241)
                        .++++++++..||+|++|
T Consensus       154 --~~~~~~~~~~~Kp~p~~~  171 (240)
T 2hi0_A          154 --FALGEKSGIRRKPAPDMT  171 (240)
T ss_dssp             --EEEEECTTSCCTTSSHHH
T ss_pred             --EEEecCCCCCCCCCHHHH
Confidence              789999999999999875

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.81  E-value=4.3e-19  Score=143.73  Aligned_cols=150  Identities=19%  Similarity=0.175  Sum_probs=113.0

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      ..++|+|+||+||||+|+... +..++.++++++|  .....+.+...  .+.........+....      ......++
T Consensus        16 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g--~~~~~~~~~~~--~g~~~~~~~~~~~~~~------~~~~~~~~   84 (237)
T 4ex6_A           16 AAADRGVILDLDGTLADTPAA-IATITAEVLAAMG--TAVSRGAILST--VGRPLPASLAGLLGVP------VEDPRVAE   84 (237)
T ss_dssp             -CCCEEEEECSBTTTBCCHHH-HHHHHHHHHHHTT--CCCCHHHHHHH--TTSCHHHHHHHHHTSC------TTSHHHHH
T ss_pred             cccCCEEEEcCCCCCcCCHHH-HHHHHHHHHHHcC--CCCCHHHHHHh--cCccHHHHHHHHhCCC------CCHHHHHH
Confidence            367999999999999999985 7789999999998  34445555544  5666666655544321      12333333


Q ss_pred             HHHHHHHHHHHHHHHHHH-hcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          154 FIASLHKRKTELFMVLIE-KKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~-~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      +...+.    +.+.+.+. .....++||+.++|+.|+++|++++++||+....++..++.+|+..+|+  .++++++++.
T Consensus        85 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~  158 (237)
T 4ex6_A           85 ATEEYG----RRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT--VIAGDDSVER  158 (237)
T ss_dssp             HHHHHH----HHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS--EEECTTTSSS
T ss_pred             HHHHHH----HHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee--eEEeCCCCCC
Confidence            333333    33433332 0236899999999999999999999999999999999999999999998  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       159 ~kp~~~~~  166 (237)
T 4ex6_A          159 GKPHPDMA  166 (237)
T ss_dssp             CTTSSHHH
T ss_pred             CCCCHHHH
Confidence            99999765

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.81  E-value=4e-20  Score=148.13  Aligned_cols=142  Identities=16%  Similarity=0.192  Sum_probs=100.2

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++|+|+||+||||+|+.+. +..+++++++++|.... ..+.+...  .|.......   ... +      ..+..+++
T Consensus         2 M~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~---~~~-~------~~~~~~~~   67 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSP-DAKTIRGF--MGPPLESSF---ATC-L------SKDQISEA   67 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCCC-CHHHHHHT--SSSCHHHHH---HTT-S------CGGGHHHH
T ss_pred             CCCCEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--cCccHHHHH---HHH-c------CHHHHHHH
Confidence            56899999999999999985 77899999999987643 23444332  444433222   211 1      11222333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+.    +.+.... .....++||+.++|+.|++ |++++|+||+.+..++..++.+|+..+|+  .+++++  +..|
T Consensus        68 ~~~~~----~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~--~~~K  137 (210)
T 2ah5_A           68 VQIYR----SYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSS--PEAP  137 (210)
T ss_dssp             HHHHH----HHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEEC--SSCC
T ss_pred             HHHHH----HHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee--eeecCC--CCCC
Confidence            33222    2222211 1225789999999999999 99999999999999999999999999998  788876  7899


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       138 p~p~~~  143 (210)
T 2ah5_A          138 HKADVI  143 (210)
T ss_dssp             SHHHHH
T ss_pred             CChHHH
Confidence            999876

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.78  E-value=2.3e-18  Score=140.98  Aligned_cols=156  Identities=21%  Similarity=0.250  Sum_probs=108.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-HhcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (241)
                      ..++|+|+||+||||+|+... +..++.++++++|.... ..+.+...  .+.+........ .............+..+
T Consensus        20 ~~~~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (243)
T 2hsz_A           20 MTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQA-SENLVMTW--IGNGADVLSQRAVDWACKQAEKELTEDEFK   95 (243)
T ss_dssp             CSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHHH--CSSCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             CccCCEEEEcCCCcCCCCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hCchHHHHHHHHhhhhhccccccCCHHHHH
Confidence            356899999999999999985 77889999999887643 33444443  555544433322 11000000012333333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      ++.+    .+.+.|..... ....++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|+  .++++++++.
T Consensus        96 ~~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~  168 (243)
T 2hsz_A           96 YFKR----QFGFYYGENLC-NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPE  168 (243)
T ss_dssp             HHHH----HHHHHHHHHTT-SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSSS
T ss_pred             HHHH----HHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE--EEEecccCCC
Confidence            3322    23333433222 236889999999999999999999999999999999999999989998  7899999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       169 ~Kp~~~~~  176 (243)
T 2hsz_A          169 IKPHPAPF  176 (243)
T ss_dssp             CTTSSHHH
T ss_pred             CCcCHHHH
Confidence            99998765

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.77  E-value=3.3e-18  Score=137.68  Aligned_cols=150  Identities=17%  Similarity=0.238  Sum_probs=109.5

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (241)
                      |+++|+|+||+||||+++... +..++.++++++|....  .+.+...  .+.........+. ..+.    ....+...
T Consensus         3 ~~~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~----~~~~~~~~   73 (233)
T 3s6j_A            3 LRPQTSFIFDLDGTLTDSVYQ-NVAAWKEALDAENIPLA--MWRIHRK--IGMSGGLMLKSLSRETGM----SITDEQAE   73 (233)
T ss_dssp             --CCCEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--TTSCHHHHHHHHHHC--------CCHHHHH
T ss_pred             CCcCcEEEEcCCCccccChHH-HHHHHHHHHHHcCCCCC--HHHHHHH--cCCcHHHHHHHHHHhcCC----CCCHHHHH
Confidence            356899999999999999885 77889999999887653  3444443  5666555544433 2222    12344433


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      ++.+.    ..+.|....  ....++||+.++|+.|+++|++++++||+....++..++.+++..+|+  .++++++++.
T Consensus        74 ~~~~~----~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~  145 (233)
T 3s6j_A           74 RLSEK----HAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI--NIVTRDDVSY  145 (233)
T ss_dssp             HHHHH----HHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS--CEECGGGSSC
T ss_pred             HHHHH----HHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh--eeeccccCCC
Confidence            33333    333333322  236899999999999999999999999999999999999999999998  7999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       146 ~kp~~~~~  153 (233)
T 3s6j_A          146 GKPDPDLF  153 (233)
T ss_dssp             CTTSTHHH
T ss_pred             CCCChHHH
Confidence            99999765

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.77  E-value=3.2e-19  Score=141.39  Aligned_cols=148  Identities=17%  Similarity=0.163  Sum_probs=104.9

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhc-CCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT-GWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  153 (241)
                      +|+|+|+||+||||+++... +..++.++++++|.....  +.+...  .+.........+... +.       ....++
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~--~g~~~~~~~~~~~~~~~~-------~~~~~~   70 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKY-YYDRRASFLGQKGISIDH--LPPSFF--IGGNTKQVWENILRDEYD-------KWDVST   70 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCCTT--SCHHHH--TTSCGGGCHHHHHGGGGG-------GSCHHH
T ss_pred             ccccEEEEcCCCCccccHHH-HHHHHHHHHHHcCCCCCH--HHHHHH--cCCCHHHHHHHHHHhhcC-------CCCHHH
Confidence            56899999999999999985 778899999998886443  333333  455555544443322 11       111122


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      +...+    .+.+..........++||+.++|+.|+++|++++++||+....++..++.+++..+|+  .++++++++..
T Consensus        71 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~  144 (214)
T 3e58_A           71 LQEEY----NTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD--IVLSGEEFKES  144 (214)
T ss_dssp             HHHHH----HHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGCSSC
T ss_pred             HHHHH----HHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee--eEeecccccCC
Confidence            22222    2222221110113688999999999999999999999999999999999999999999  89999999999


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       145 kp~~~~~  151 (214)
T 3e58_A          145 KPNPEIY  151 (214)
T ss_dssp             TTSSHHH
T ss_pred             CCChHHH
Confidence            9999765

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.76  E-value=4.4e-19  Score=143.19  Aligned_cols=144  Identities=26%  Similarity=0.315  Sum_probs=102.5

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      ++|+|+||+||||+|+... +..++.++++++|.... ..+.+...  .+.+.......+...      ...+    ++.
T Consensus         2 ~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~------~~~~----~~~   67 (222)
T 2nyv_A            2 SLRVILFDLDGTLIDSAKD-IALALEKTLKELGLEEY-YPDNVTKY--IGGGVRALLEKVLKD------KFRE----EYV   67 (222)
T ss_dssp             EECEEEECTBTTTEECHHH-HHHHHHHHHHHTTCGGG-CCSCGGGG--CSSCHHHHHHHHHGG------GCCT----HHH
T ss_pred             CCCEEEECCCCcCCCCHHH-HHHHHHHHHHHcCCCCC-CHHHHHHH--hCcCHHHHHHHHhCh------HHHH----HHH
Confidence            4799999999999999985 77789999999887521 11222222  455544444433210      0111    111


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP  235 (241)
                      ..    +.+.|.... .....++||+.++|+.|+++|++++++||+....++..++.+|+..+|+  .++++++++..||
T Consensus        68 ~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~Kp  140 (222)
T 2nyv_A           68 EV----FRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD--LIVGGDTFGEKKP  140 (222)
T ss_dssp             HH----HHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTSSCTTCC
T ss_pred             HH----HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe--EEEecCcCCCCCC
Confidence            21    222222211 1236889999999999999999999999999999999999999989998  8999999999999


Q ss_pred             CCCCC
Q 026252          236 DPLCC  240 (241)
Q Consensus       236 ~p~~f  240 (241)
                      +|++|
T Consensus       141 ~~~~~  145 (222)
T 2nyv_A          141 SPTPV  145 (222)
T ss_dssp             TTHHH
T ss_pred             ChHHH
Confidence            99865

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.76  E-value=1e-17  Score=138.83  Aligned_cols=63  Identities=13%  Similarity=0.196  Sum_probs=58.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|++ +++++|+||+....+...++.+|+..+|+  .++++++++..||+|++|
T Consensus       120 ~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~~KP~p~~~  182 (260)
T 2gfh_A          120 MILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD--AIVIGGEQKEEKPAPSIF  182 (260)
T ss_dssp             CCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS--EEEEGGGSSSCTTCHHHH
T ss_pred             CCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh--eEEecCCCCCCCCCHHHH
Confidence            7899999999999998 59999999999999999999999999999  789999999999999876

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.76  E-value=3.8e-18  Score=139.00  Aligned_cols=148  Identities=20%  Similarity=0.209  Sum_probs=105.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHH-HHHh-cCCCCCCCCCHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNK-TGWPEKAPSDEEER  151 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~  151 (241)
                      |+++|+|+||+||||+|+... +..++.++++++|....  .+.....  .+........ .+.. .+.    ....+..
T Consensus        21 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~   91 (243)
T 3qxg_A           21 RKKLKAVLFDMDGVLFNSMPY-HSEAWHQVMKTHGLDLS--REEAYMH--EGRTGASTINIVFQRELGK----EATQEEI   91 (243)
T ss_dssp             -CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCC--HHHHHHT--TTSCHHHHHHHHHHHHHSS----CCCHHHH
T ss_pred             cccCCEEEEcCCCCCCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHH--hCCCHHHHHHHHHHHHhCC----CCCHHHH
Confidence            467999999999999999985 77899999999887643  2333322  3444433322 3222 222    1233333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc--ccceEEecCC
Q 026252          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDV  229 (241)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f--~~~~iv~s~~  229 (241)
                      .+....+    .+.+..   .....++||+.++|+.|+++|++++++||+....+...++. ++..+|  +  .++++++
T Consensus        92 ~~~~~~~----~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d--~i~~~~~  161 (243)
T 3qxg_A           92 ESIYHEK----SILFNS---YPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKE--LMVTAFD  161 (243)
T ss_dssp             HHHHHHH----HHHHHT---SSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGG--GEECTTT
T ss_pred             HHHHHHH----HHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcc--eEEeHHh
Confidence            3333322    222211   13468999999999999999999999999998888888998 999999  7  7999999


Q ss_pred             CCCCCCCCCCC
Q 026252          230 VPRKKPDPLCC  240 (241)
Q Consensus       230 ~~~~KP~p~~f  240 (241)
                      ++..||+|++|
T Consensus       162 ~~~~kp~~~~~  172 (243)
T 3qxg_A          162 VKYGKPNPEPY  172 (243)
T ss_dssp             CSSCTTSSHHH
T ss_pred             CCCCCCChHHH
Confidence            99999999865

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.76  E-value=3.4e-18  Score=139.91  Aligned_cols=147  Identities=22%  Similarity=0.278  Sum_probs=105.5

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-HhcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  152 (241)
                      ++++|+|+||+||||+|+... +..++.++++++|....  .+.+...  .+.........+ ...+.+    ...+   
T Consensus        27 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~---   94 (250)
T 3l5k_A           27 PQPVTHLIFDMDGLLLDTERL-YSVVFQEICNRYDKKYS--WDVKSLV--MGKKALEAAQIIIDVLQLP----MSKE---   94 (250)
T ss_dssp             CCCCSEEEEETBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--TTCCHHHHHHHHHHHHTCS----SCHH---
T ss_pred             ccCCcEEEEcCCCCcCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHh--cCCCHHHHHHHHHHHhCCC----CCHH---
Confidence            367999999999999999885 77899999999887643  3444443  566655544433 333331    1222   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-hcCCCCcccceEEecC--C
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGD--V  229 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~-l~~~~~f~~~~iv~s~--~  229 (241)
                      ++...+.    +.+.....  ...++||+.++|+.|+++|++++|+||+....+...+.. +++..+|+  .+++++  +
T Consensus        95 ~~~~~~~----~~~~~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~--~~~~~~~~~  166 (250)
T 3l5k_A           95 ELVEESQ----TKLKEVFP--TAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFS--HIVLGDDPE  166 (250)
T ss_dssp             HHHHHHH----HHHHHHGG--GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSS--CEECTTCTT
T ss_pred             HHHHHHH----HHHHHHhc--cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhee--eEEecchhh
Confidence            2222222    22322222  278999999999999999999999999998877777754 57788998  789999  8


Q ss_pred             CCCCCCCCCCC
Q 026252          230 VPRKKPDPLCC  240 (241)
Q Consensus       230 ~~~~KP~p~~f  240 (241)
                      ++..||+|++|
T Consensus       167 ~~~~Kp~~~~~  177 (250)
T 3l5k_A          167 VQHGKPDPDIF  177 (250)
T ss_dssp             CCSCTTSTHHH
T ss_pred             ccCCCCChHHH
Confidence            99999999865

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.75  E-value=7.1e-18  Score=136.15  Aligned_cols=149  Identities=23%  Similarity=0.340  Sum_probs=99.0

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  155 (241)
                      +|+|+||+||||+|+... +..++.++++++|...  ..+.+...  .+.........+. ..+...  ....+...++.
T Consensus         2 ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   74 (233)
T 3nas_A            2 LKAVIFDLDGVITDTAEY-HFLAWKHIAEQIDIPF--DRDMNERL--KGISREESLESILIFGGAET--KYTNAEKQELM   74 (233)
T ss_dssp             CCEEEECSBTTTBCHHHH-HHHHHHHHHHHTTCCC--CHHHHHHT--TTCCHHHHHHHHHHHTTCTT--TSCHHHHHHHH
T ss_pred             CcEEEECCCCCcCCCHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--cCCCHHHHHHHHHHHhCCCC--CCCHHHHHHHH
Confidence            699999999999999985 7789999999988874  34444443  5666655544443 332210  12334444333


Q ss_pred             HHHHHHHHHHHHHHHHhc-CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKK-LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~-~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ..    +.+.+....... ...++||+.++|+.|+++|++++|+||+..  +...++.+|+..+|+  .++++++++..|
T Consensus        75 ~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~--~i~~~~~~~~~K  146 (233)
T 3nas_A           75 HR----KNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH--AIVDPTTLAKGK  146 (233)
T ss_dssp             HH----HHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS--EECCC-------
T ss_pred             HH----HHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC--EEeeHhhCCCCC
Confidence            33    333444443332 123899999999999999999999999864  888899999999999  889999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       147 p~~~~~  152 (233)
T 3nas_A          147 PDPDIF  152 (233)
T ss_dssp             --CCHH
T ss_pred             CChHHH
Confidence            999876

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.75  E-value=9.9e-18  Score=135.30  Aligned_cols=152  Identities=15%  Similarity=0.146  Sum_probs=102.9

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      ||++|+|+||+||||+|+... +..++.++++++|.....  .....+...+   ......+. .+.    ....+...+
T Consensus         4 mm~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~~~~~---~~~~~~~~-~~~----~~~~~~~~~   72 (238)
T 3ed5_A            4 MKRYRTLLFDVDDTILDFQAA-EALALRLLFEDQNIPLTN--DMKAQYKTIN---QGLWRAFE-EGK----MTRDEVVNT   72 (238)
T ss_dssp             CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCCH--HHHHHHHHHH---HHHHHHHH-TTS----SCHHHHHHH
T ss_pred             cccCCEEEEcCcCcCcCCchh-HHHHHHHHHHHcCCCcch--HHHHHHHHHH---HHHHHHHH-hcc----CCHHHHHHH
Confidence            467999999999999999985 778999999998877542  2222221110   01111111 110    001111111


Q ss_pred             HHHHHH---------HHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceE
Q 026252          154 FIASLH---------KRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI  224 (241)
Q Consensus       154 ~~~~~~---------~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~i  224 (241)
                      .+..+.         ....+.|...... ...++||+.++|+.|+++ ++++++||+....+...++.+|+..+|+  .+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~  148 (238)
T 3ed5_A           73 RFSALLKEYGYEADGALLEQKYRRFLEE-GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK--DI  148 (238)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHTT-CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS--EE
T ss_pred             HHHHHHHHcCCCCcHHHHHHHHHHHHHh-cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh--eE
Confidence            111111         2233444444333 368999999999999999 9999999999999999999999999998  89


Q ss_pred             EecCCCCCCCCCCCCC
Q 026252          225 FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       225 v~s~~~~~~KP~p~~f  240 (241)
                      +++++++..||+|++|
T Consensus       149 ~~~~~~~~~kp~~~~~  164 (238)
T 3ed5_A          149 FVSEDTGFQKPMKEYF  164 (238)
T ss_dssp             EEGGGTTSCTTCHHHH
T ss_pred             EEecccCCCCCChHHH
Confidence            9999999999998765

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.75  E-value=1.9e-18  Score=138.71  Aligned_cols=147  Identities=15%  Similarity=0.139  Sum_probs=105.9

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      .++|+|+||+||||+|+... +..++.++++++|..... .+.+...  .|.........+.  +      .......+.
T Consensus         2 ~m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~--~------~~~~~~~~~   69 (226)
T 3mc1_A            2 SLYNYVLFDLDGTLTDSAEG-ITKSVKYSLNKFDIQVED-LSSLNKF--VGPPLKTSFMEYY--N------FDEETATVA   69 (226)
T ss_dssp             CCCCEEEECSBTTTBCCHHH-HHHHHHHHHHTTTCCCSC-GGGGGGG--SSSCHHHHHHHHH--C------CCHHHHHHH
T ss_pred             CCCCEEEEeCCCccccCHHH-HHHHHHHHHHHcCCCCCC-HHHHHHH--hCcCHHHHHHHHh--C------CCHHHHHHH
Confidence            46899999999999999985 778899999998876432 2333322  4554444433322  2      223333333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ...+.    +.+.... .....++||+.++|+.|+++|++++++||+....++..++.+++..+|+  .++++++++..|
T Consensus        70 ~~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~k  142 (226)
T 3mc1_A           70 IDYYR----DYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD--AIVGSSLDGKLS  142 (226)
T ss_dssp             HHHHH----HHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSSSC
T ss_pred             HHHHH----HHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee--eeeccCCCCCCC
Confidence            32222    2222111 1236899999999999999999999999999999999999999999999  899999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       143 p~~~~~  148 (226)
T 3mc1_A          143 TKEDVI  148 (226)
T ss_dssp             SHHHHH
T ss_pred             CCHHHH
Confidence            998764

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.75  E-value=4e-18  Score=140.18  Aligned_cols=147  Identities=20%  Similarity=0.215  Sum_probs=108.6

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (241)
                      ++++|+|+||+||||+|+... +..++.++++++|....  .+.+... ..+.........+. ..+..    ...+..+
T Consensus        25 ~~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~~----~~~~~~~   96 (259)
T 4eek_A           25 DAPFDAVLFDLDGVLVESEGI-IAQVWQSVLAERGLHLD--LTEIAMY-FTGQRFDGVLAYLAQQHDFV----PPPDFLD   96 (259)
T ss_dssp             CCCCSEEEEESBTTTEECHHH-HHHHHHHHHHHTTCCCC--HHHHHHH-TTTCCHHHHHHHHHHHHCCC----CCTTHHH
T ss_pred             hcCCCEEEECCCCCcccCHHH-HHHHHHHHHHHhCCCCC--HHHHHHH-HhCCCHHHHHHHHHHHcCCC----CCHHHHH
Confidence            467999999999999999985 77889999999887643  2332222 24556555555433 33332    1222333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccce-EEecCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-IFAGDVVP  231 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~-iv~s~~~~  231 (241)
                      ++.+.+    .+.+      ....++||+.++|+.|+++|++++|+||.....++..++.+|+..+|+  . ++++++++
T Consensus        97 ~~~~~~----~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~i~~~~~~~  164 (259)
T 4eek_A           97 VLETRF----NAAM------TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAG--EHIYDPSWVG  164 (259)
T ss_dssp             HHHHHH----HHHH------TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHC--SCEECGGGGT
T ss_pred             HHHHHH----HHHh------ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhcc--ceEEeHhhcC
Confidence            222222    2222      337899999999999999999999999999999999999999989998  7 89999999


Q ss_pred             -CCCCCCCCC
Q 026252          232 -RKKPDPLCC  240 (241)
Q Consensus       232 -~~KP~p~~f  240 (241)
                       ..||+|++|
T Consensus       165 ~~~Kp~~~~~  174 (259)
T 4eek_A          165 GRGKPHPDLY  174 (259)
T ss_dssp             TCCTTSSHHH
T ss_pred             cCCCCChHHH
Confidence             999999765

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.75  E-value=1.7e-18  Score=139.41  Aligned_cols=144  Identities=15%  Similarity=0.109  Sum_probs=87.5

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHH-HHHHH-hCCch---------HHHHHHHHhcCCCCCC
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLY-GELLK-IGGGK---------ERMTAYFNKTGWPEKA  144 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~-~~~~~-~~~~~---------~~~~~~~~~~~~~~~~  144 (241)
                      ++|+|+||+||||+|+.+. +..++.+++.++|....  .+.+ ..+.. .|...         ..+...+...+..   
T Consensus         2 ~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~---   75 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPV-FYEKVYQVLKDNGYDLD--LRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY---   75 (220)
T ss_dssp             CCCEEEECSBTTTEEEEET-THHHHHHHHHHTTCCCC--HHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC---
T ss_pred             CceEEEEcCCCceeccccc-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCC---
Confidence            5799999999999999986 66789999999887643  2332 22211 12110         0012222222221   


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceE
Q 026252          145 PSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI  224 (241)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~i  224 (241)
                       ..++..    +.+.+    .+   .......++||+.++|+.|+++|++++|+||+.. .++..++.+|+.++|+  .+
T Consensus        76 -~~~~~~----~~~~~----~~---~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~--~~  140 (220)
T 2zg6_A           76 -PSERLV----KELKE----AD---IRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFD--AL  140 (220)
T ss_dssp             -CCHHHH----HHHHH----TT---TTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCS--EE
T ss_pred             -CcHHHH----HHHHH----Hh---hcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHee--EE
Confidence             111111    11111    11   1112357899999999999999999999999976 5888999999999998  89


Q ss_pred             EecCCCCCCCCCCCCC
Q 026252          225 FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       225 v~s~~~~~~KP~p~~f  240 (241)
                      +++++++..||+|++|
T Consensus       141 ~~~~~~~~~Kp~~~~~  156 (220)
T 2zg6_A          141 ALSYEIKAVKPNPKIF  156 (220)
T ss_dssp             C-----------CCHH
T ss_pred             EeccccCCCCCCHHHH
Confidence            9999999999999876

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.75  E-value=4.1e-17  Score=134.73  Aligned_cols=152  Identities=18%  Similarity=0.219  Sum_probs=106.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-----------HhcCCCC
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-----------NKTGWPE  142 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~  142 (241)
                      |+++|+|+||+||||+|+.......++.++++++|...  ..+.+...  .+.........+           ...+.  
T Consensus        11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   84 (277)
T 3iru_A           11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEV--TQAEAREP--MGTEKSEHIRRMLGNSRIANAWLSIKGQ--   84 (277)
T ss_dssp             CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCC--CHHHHHTT--TTSCHHHHHHHHTTSHHHHHHHHHHHSS--
T ss_pred             hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCC--CHHHHHHH--hcCchHHHHHHhccchHHHHHHHHHhcc--
Confidence            45689999999999999987532678999999988864  33444332  333322222111           11121  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCC-ccc
Q 026252          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER-AEK  221 (241)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~-f~~  221 (241)
                        ....+...++...+..    .+....... ..++||+.++|+.|+++|++++++||.....+...++.+++..+ |+ 
T Consensus        85 --~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~-  156 (277)
T 3iru_A           85 --ASNEEDIKRLYDLFAP----IQTRIVAQR-SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA-  156 (277)
T ss_dssp             --CCCHHHHHHHHHHHHH----HHHHHHHHT-CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS-
T ss_pred             --CCCHHHHHHHHHHHHH----HHHHHhhcc-CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc-
Confidence              2233444443333333    333333332 68999999999999999999999999999999999999988888 77 


Q ss_pred             ceEEecCCCCCCCCCCCCC
Q 026252          222 IQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       222 ~~iv~s~~~~~~KP~p~~f  240 (241)
                       .++++++++..||+|++|
T Consensus       157 -~~~~~~~~~~~kp~~~~~  174 (277)
T 3iru_A          157 -STVFATDVVRGRPFPDMA  174 (277)
T ss_dssp             -EEECGGGSSSCTTSSHHH
T ss_pred             -eEecHHhcCCCCCCHHHH
Confidence             889999999999999765

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.75  E-value=1.9e-18  Score=139.51  Aligned_cols=143  Identities=14%  Similarity=0.113  Sum_probs=100.4

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHH-HHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISF-NDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (241)
                      |+++|+|+||+||||+|+... +..++ .++++++|.....    +...  .+.........+...           ..+
T Consensus        22 m~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~~----~~~~--~g~~~~~~~~~~~~~-----------~~~   83 (231)
T 3kzx_A           22 MKQPTAVIFDWYNTLIDTSIN-IDRTTFYQVLDQMGYKNID----LDSI--PNSTIPKYLITLLGK-----------RWK   83 (231)
T ss_dssp             CCCCSEEEECTBTTTEETTSS-CCHHHHHHHHHHTTCCCCC----CTTS--CTTTHHHHHHHHHGG-----------GHH
T ss_pred             cCCCCEEEECCCCCCcCCchh-HHHHHHHHHHHHcCCCHHH----HHHH--hCccHHHHHHHHhCc-----------hHH
Confidence            567999999999999999986 55677 9999998876421    1110  222222222222211           111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      +    ....+.+.+..........++||+.++|+.|+++|++++++||+....++..++.+|+..+|+  .++++++++.
T Consensus        84 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~i~~~~~~~~  157 (231)
T 3kzx_A           84 E----ATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD--SIIGSGDTGT  157 (231)
T ss_dssp             H----HHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEETSSSC
T ss_pred             H----HHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee--eEEcccccCC
Confidence            1    111112222100012346899999999999999999999999999999999999999999998  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       158 ~Kp~~~~~  165 (231)
T 3kzx_A          158 IKPSPEPV  165 (231)
T ss_dssp             CTTSSHHH
T ss_pred             CCCChHHH
Confidence            99999765

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.74  E-value=2.3e-18  Score=137.02  Aligned_cols=143  Identities=17%  Similarity=0.273  Sum_probs=103.7

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++|+|+||+||||+|+.+. +..++.++++++|..  ...+.+...  .|.....+.+.+   ++.      .....+.
T Consensus         2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~--~~~~~~~~~--~g~~~~~~~~~~---~~~------~~~~~~~   67 (209)
T 2hdo_A            2 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKP--FSPAQAQKT--FPMAAEQAMTEL---GIA------ASEFDHF   67 (209)
T ss_dssp             CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCC--CCHHHHHHH--TTSCHHHHHHHT---TCC------GGGHHHH
T ss_pred             CcccEEEEcCCCCCcCCHHH-HHHHHHHHHHHhCCC--CCHHHHHHH--cCCcHHHHHHHc---CCC------HHHHHHH
Confidence            45899999999999999985 778899999998874  344555543  555554444432   221      1122222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ...+.    +.+...  .....++||+.++|+.|+++ ++++++||+....++..++.+|+..+|+  .++++++.+..|
T Consensus        68 ~~~~~----~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~K  138 (209)
T 2hdo_A           68 QAQYE----DVMASH--YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRK  138 (209)
T ss_dssp             HHHHH----HHHTTC--GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSSCCT
T ss_pred             HHHHH----HHHhhh--cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhcc--EEEecCcCCCCC
Confidence            22111    111110  12367899999999999999 9999999999999999999999888998  789999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       139 P~~~~~  144 (209)
T 2hdo_A          139 PDPLPL  144 (209)
T ss_dssp             TSSHHH
T ss_pred             CCcHHH
Confidence            999765

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.73  E-value=1.4e-17  Score=135.37  Aligned_cols=148  Identities=22%  Similarity=0.230  Sum_probs=103.1

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHH-HHHh-cCCCCCCCCCHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTA-YFNK-TGWPEKAPSDEEER  151 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~  151 (241)
                      ++++|+|+||+||||+|+... +..++.++++++|....  .+.....  .+........ .+.. .+.    ....+..
T Consensus        20 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~   90 (247)
T 3dv9_A           20 SIDLKAVLFDMDGVLFDSMPN-HAESWHKIMKRFGFGLS--REEAYMH--EGRTGASTINIVSRRERGH----DATEEEI   90 (247)
T ss_dssp             CCCCCEEEEESBTTTBCCHHH-HHHHHHHHHHHTTCCCC--HHHHHHT--TTSCHHHHHHHHHHHHHSS----CCCHHHH
T ss_pred             CCCCCEEEECCCCccCcCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hCCChHHHHHHHHHHhcCC----CCCHHHH
Confidence            467899999999999999985 77889999999887643  2333222  3444433322 2222 222    1233333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc--ccceEEecCC
Q 026252          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA--EKIQIFAGDV  229 (241)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f--~~~~iv~s~~  229 (241)
                      .+....+    .+.+..   .....++||+.++|+.|+++|++++++||+....+...++. ++.++|  +  .++++++
T Consensus        91 ~~~~~~~----~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~--~~~~~~~  160 (247)
T 3dv9_A           91 KAIYQAK----TEEFNK---CPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQAN--LMVTAFD  160 (247)
T ss_dssp             HHHHHHH----HHHHTT---SCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGG--GEECGGG
T ss_pred             HHHHHHH----HHHHHh---cccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCC--eEEeccc
Confidence            3332222    222211   12368899999999999999999999999998889999998 999999  7  7999999


Q ss_pred             CCCCCCCCCCC
Q 026252          230 VPRKKPDPLCC  240 (241)
Q Consensus       230 ~~~~KP~p~~f  240 (241)
                      ++..||+|++|
T Consensus       161 ~~~~kp~~~~~  171 (247)
T 3dv9_A          161 VKYGKPNPEPY  171 (247)
T ss_dssp             CSSCTTSSHHH
T ss_pred             CCCCCCCCHHH
Confidence            99999999765

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.73  E-value=1.5e-17  Score=135.41  Aligned_cols=148  Identities=17%  Similarity=0.055  Sum_probs=98.2

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCC-CCCCHHHHHHHHHhCC------chHHHHHHHHhc-CCCCCCCCC
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELG-VTWDVDLYGELLKIGG------GKERMTAYFNKT-GWPEKAPSD  147 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~  147 (241)
                      |+|+|+||+||||+|+.+. +..++.+++++++.. .....+.+...+..+.      ....+...+... +..     .
T Consensus         1 m~k~iiFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~   74 (241)
T 2hoq_A            1 MVKVIFFDLDDTLVDTSKL-AEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY-----N   74 (241)
T ss_dssp             CCCEEEECSBTTTBCHHHH-HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC-----C
T ss_pred             CccEEEEcCCCCCCCChhh-HHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc-----c
Confidence            3799999999999999985 767888888877422 1222222222111110      111122222222 221     1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEec
Q 026252          148 EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                      ....+++        .+.|.+.+... ..++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+  .++++
T Consensus        75 ~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~  143 (241)
T 2hoq_A           75 PKWISAG--------VIAYHNTKFAY-LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE--HVIIS  143 (241)
T ss_dssp             HHHHHHH--------HHHHHHHHHHH-CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS--EEEEG
T ss_pred             chHHHHH--------HHHHHHHHHhh-CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc--EEEEe
Confidence            1111111        12222222222 5789999999999999999999999999999999999999999998  89999


Q ss_pred             CCCCCCCCCCCCC
Q 026252          228 DVVPRKKPDPLCC  240 (241)
Q Consensus       228 ~~~~~~KP~p~~f  240 (241)
                      ++++..||+|++|
T Consensus       144 ~~~~~~Kp~~~~~  156 (241)
T 2hoq_A          144 DFEGVKKPHPKIF  156 (241)
T ss_dssp             GGGTCCTTCHHHH
T ss_pred             CCCCCCCCCHHHH
Confidence            9999999999765

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.73  E-value=5.7e-18  Score=137.60  Aligned_cols=145  Identities=12%  Similarity=0.115  Sum_probs=105.9

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      ++|+|+||+||||+|+... +..++.++++++|..  ...+.+...  .+..........  .+      .......+..
T Consensus        28 mik~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~--~~~~~~~~~--~g~~~~~~~~~~--~~------~~~~~~~~~~   94 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEG-ITKSIQYSLNSFGIK--EDLENLDQF--IGPPLHDTFKEY--YK------FEDKKAKEAV   94 (240)
T ss_dssp             CCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCC--CCGGGGGGG--SSSCHHHHHHHT--SC------CCHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHH-HHHHHHHHHHHcCCC--CCHHHHHHH--hCccHHHHHHHH--hC------CCHHHHHHHH
Confidence            5899999999999999985 778999999998887  333444332  344443332221  11      2333333333


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKP  235 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP  235 (241)
                      ..+.+    .+.... .....++||+.++|+.|+++|++++++||+....++..++.+|+..+|+  .++++++++..||
T Consensus        95 ~~~~~----~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp  167 (240)
T 3sd7_A           95 EKYRE----YFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK--YIAGSNLDGTRVN  167 (240)
T ss_dssp             HHHHH----HHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECTTSCCCC
T ss_pred             HHHHH----HHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE--EEEeccccCCCCC
Confidence            33332    232211 1236899999999999999999999999999999999999999999999  8999999999999


Q ss_pred             CCCCC
Q 026252          236 DPLCC  240 (241)
Q Consensus       236 ~p~~f  240 (241)
                      +|++|
T Consensus       168 ~~~~~  172 (240)
T 3sd7_A          168 KNEVI  172 (240)
T ss_dssp             HHHHH
T ss_pred             CHHHH
Confidence            98764

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.71  E-value=4.4e-17  Score=134.79  Aligned_cols=146  Identities=15%  Similarity=0.205  Sum_probs=98.6

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHH----------------hCCchHH-----HHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK----------------IGGGKER-----MTAYF  135 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~~~~-----~~~~~  135 (241)
                      +|+|+||+||||+++... +..++.+++.++|....  .+.+...+.                .|.....     +...+
T Consensus         1 ik~iiFDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   77 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHP-LGEAYATKARAHGLEVE--PSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTF   77 (263)
T ss_dssp             CCEEEECCBTTTEEESSC-HHHHHHHHHHHTTCCCC--HHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeCCCCC-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHH
Confidence            589999999999999885 67789999999988743  333322211                0111111     11111


Q ss_pred             HhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      ...+.     ...       ..+.....+.+..+.....+.++||+.++|+.|+++|++++|+||.... +...++.+|+
T Consensus        78 ~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl  144 (263)
T 3k1z_A           78 HLAGV-----QDA-------QAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGL  144 (263)
T ss_dssp             HHTTC-----CCH-------HHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTC
T ss_pred             HHcCC-----CCH-------HHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCc
Confidence            11111     011       1111122233333332233579999999999999999999999998864 6889999999


Q ss_pred             CCCcccceEEecCCCCCCCCCCCCC
Q 026252          216 PERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       216 ~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..+|+  .++++++++..||+|++|
T Consensus       145 ~~~f~--~~~~~~~~~~~Kp~~~~~  167 (263)
T 3k1z_A          145 REHFD--FVLTSEAAGWPKPDPRIF  167 (263)
T ss_dssp             GGGCS--CEEEHHHHSSCTTSHHHH
T ss_pred             HHhhh--EEEeecccCCCCCCHHHH
Confidence            99999  899999999999999765

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.70  E-value=9.7e-17  Score=129.46  Aligned_cols=147  Identities=17%  Similarity=0.184  Sum_probs=100.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCC-CCHHHHHHHHHhCCchHH------------------HHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVT-WDVDLYGELLKIGGGKER------------------MTAYF  135 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~------------------~~~~~  135 (241)
                      |++|+|+||+||||+|+... +..++.++++++|.... ...+.+...+. +.....                  +...+
T Consensus         3 m~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRN-ARDTFEEVYQKYSFDRYFDSFDHYYTLYQ-RRNTELWLEYGEGKVTKEELNRQRFFYPL   80 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHH-HHHHHHHHHHHTTGGGTSSSHHHHHHHHH-HHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhh-HHHHHHHHHHHcCCCcccCCHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence            46899999999999999985 77889999999887641 02233322211 100000                  11111


Q ss_pred             HhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      ...+++     ..        .......+.|...... ...++||+.++|+.|+ +|++++++||+....++..++.+++
T Consensus        81 ~~~~~~-----~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l  145 (240)
T 3qnm_A           81 QAVGVE-----DE--------ALAERFSEDFFAIIPT-KSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGV  145 (240)
T ss_dssp             HHTTCC-----CH--------HHHHHHHHHHHHHGGG-CCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTC
T ss_pred             HHcCCC-----cH--------HHHHHHHHHHHHHhhh-cCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcCh
Confidence            122211     11        1112222233332222 3789999999999999 8999999999999999999999999


Q ss_pred             CCCcccceEEecCCCCCCCCCCCCC
Q 026252          216 PERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       216 ~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..+|+  .++++++++..||+|++|
T Consensus       146 ~~~f~--~~~~~~~~~~~kp~~~~~  168 (240)
T 3qnm_A          146 DRYFK--KIILSEDLGVLKPRPEIF  168 (240)
T ss_dssp             GGGCS--EEEEGGGTTCCTTSHHHH
T ss_pred             Hhhce--eEEEeccCCCCCCCHHHH
Confidence            99998  899999999999998765

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.69  E-value=1.8e-16  Score=126.46  Aligned_cols=148  Identities=17%  Similarity=0.249  Sum_probs=105.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++|+|+||+||||+|+... +..++.++++++|.... ..+.+...  .|.........+...       .......++
T Consensus         4 M~~k~v~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~--~g~~~~~~~~~~~~~-------~~~~~~~~~   72 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRG-IVTCFRSVLERHGYTGI-TDDMIKRT--IGKTLEESFSILTGI-------TDADQLESF   72 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHTT--TTSCHHHHHHHHHCC-------CCHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHH-HHHHHHHHHHHhCCCCC-CHHHHHHH--hCCcHHHHHHHHcCC-------CCHHHHHHH
Confidence            45899999999999999885 77789999999887632 23343332  455555554443321       122222222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                          .....+.+...+.. ...++||+.++|+.|+++|++++++||.....+...++.+++..+|+  .++++++++..|
T Consensus        73 ----~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~k  145 (225)
T 3d6j_A           73 ----RQEYSKEADIYMNA-NTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD--IIIGGEDVTHHK  145 (225)
T ss_dssp             ----HHHHHHHHHHHTGG-GCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS--EEECGGGCSSCT
T ss_pred             ----HHHHHHHHHHhccc-cCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee--eeeehhhcCCCC
Confidence                22233334333333 26788999999999999999999999999999999999999888898  788888889999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       146 ~~~~~~  151 (225)
T 3d6j_A          146 PDPEGL  151 (225)
T ss_dssp             TSTHHH
T ss_pred             CChHHH
Confidence            998754

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.69  E-value=9.1e-18  Score=139.35  Aligned_cols=63  Identities=16%  Similarity=0.091  Sum_probs=56.5

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh---cCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---LGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l---~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ...++||+.++|+.|+++|++++|+||++...++.+++.+   ++.++|+  .++++ +++ .||+|++|
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd--~i~~~-~~~-~KP~p~~~  193 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD--GHFDT-KIG-HKVESESY  193 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS--EEECG-GGC-CTTCHHHH
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhcc--EEEec-CCC-CCCCHHHH
Confidence            3689999999999999999999999999999899998854   5888998  78888 888 99999876

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.68  E-value=1.4e-16  Score=124.60  Aligned_cols=140  Identities=17%  Similarity=0.172  Sum_probs=96.7

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++|+|+||+||||+|+... +..++.++++++|....  .+.+.... .+.........   .+ .     ...    +
T Consensus         4 M~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~-~~~~~~~~~~~---~~-~-----~~~----~   66 (190)
T 2fi1_A            4 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQD--HDSVYQAL-KVSTPFAIETF---AP-N-----LEN----F   66 (190)
T ss_dssp             CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHHH-HHCHHHHHHHH---CT-T-----CTT----H
T ss_pred             CcccEEEEeCCCCcCCCHHH-HHHHHHHHHHHhCCCCC--HHHHHHHH-ccccHHHHHHH---hh-h-----HHH----H
Confidence            35899999999999999885 77789999999887643  34333321 22222222222   11 0     011    1


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ...+    .+.+..... . ..++||+.++|+.|+++|++++++||.. ..++..++.+++..+|+  .++++++++..|
T Consensus        67 ~~~~----~~~~~~~~~-~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~--~~~~~~~~~~~k  137 (190)
T 2fi1_A           67 LEKY----KENEARELE-H-PILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFT--EVVTSSSGFKRK  137 (190)
T ss_dssp             HHHH----HHHHHHHTT-S-CCBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEE--EEECGGGCCCCT
T ss_pred             HHHH----HHHHHHhcC-c-CccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhhee--eeeeccccCCCC
Confidence            1111    122222222 2 3489999999999999999999999987 46888899999989998  789999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       138 p~~~~~  143 (190)
T 2fi1_A          138 PNPESM  143 (190)
T ss_dssp             TSCHHH
T ss_pred             CCHHHH
Confidence            999765

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.68  E-value=2.5e-16  Score=123.79  Aligned_cols=143  Identities=19%  Similarity=0.229  Sum_probs=99.1

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhC-CchHHHHHHHH-hcCCCCCCCCCHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIG-GGKERMTAYFN-KTGWPEKAPSDEEERK  152 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (241)
                      |++|+|+||+||||+|+... +..++.++++++|...  ....+...  .+ .+.......+. ...+      ...   
T Consensus         2 M~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~--~~~~~~~~--~g~~~~~~~~~~~~~~~~~------~~~---   67 (207)
T 2go7_A            2 MQKTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPY--DKEKVREF--IFKYSVQDLLVRVAEDRNL------DVE---   67 (207)
T ss_dssp             --CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCC--CHHHHHHH--HHHSCHHHHHHHHHHHHTC------CHH---
T ss_pred             CcccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCCC--CHHHHHHH--HccccHHHHHHHhhchhhc------cHH---
Confidence            35899999999999999985 7778899999988743  33444443  33 33444433332 1110      111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                       ...    ...+.+.+.+. ....++||+.++|+.|+++|++++++||+....+. .++.+++.++|+  .++++++.+.
T Consensus        68 -~~~----~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~--~~~~~~~~~~  138 (207)
T 2go7_A           68 -VLN----QVRAQSLAEKN-AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT--EILTSQSGFV  138 (207)
T ss_dssp             -HHH----HHHHHHHTTCG-GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE--EEECGGGCCC
T ss_pred             -HHH----HHHHHHHHhcc-ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee--eEEecCcCCC
Confidence             111    11122222111 22678999999999999999999999999988888 999998888898  7899999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       139 ~Kp~~~~~  146 (207)
T 2go7_A          139 RKPSPEAA  146 (207)
T ss_dssp             CTTSSHHH
T ss_pred             CCCCcHHH
Confidence            99998764

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.67  E-value=9.3e-17  Score=129.37  Aligned_cols=151  Identities=16%  Similarity=0.118  Sum_probs=99.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHh-hcCCCCCCHHHHHHHHHhCCchHH-HHHHHHhcCCCCCCCCCHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKE-KELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERK  152 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  152 (241)
                      |++|+|+||+||||+|+... +..++.+++.+ +|....   +.+..  ..|..... +...+...+.      ......
T Consensus         2 M~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~---~~~~~--~~g~~~~~~~~~~~~~~~~------~~~~~~   69 (234)
T 2hcf_A            2 MSRTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGS---TGSHD--FSGKMDGAIIYEVLSNVGL------ERAEIA   69 (234)
T ss_dssp             -CCEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCC---C---C--CTTCCHHHHHHHHHHTTTC------CHHHHH
T ss_pred             CcceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCCc---cchhh--hcCCChHHHHHHHHHHcCC------Ccccch
Confidence            35899999999999999985 77789998888 677643   12211  24555544 3334443332      111001


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~-gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~  231 (241)
                      +....+...+.+.+.+........++||+.++|+.|+++ |++++|+||+....+...++.+++..+|+  .++++++..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~  147 (234)
T 2hcf_A           70 DKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDAL  147 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCS
T ss_pred             hHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC--cceecCCCc
Confidence            122233333333333322112357899999999999999 99999999999999999999999999998  677777764


Q ss_pred             -CCCCCCCC
Q 026252          232 -RKKPDPLC  239 (241)
Q Consensus       232 -~~KP~p~~  239 (241)
                       ..||.|++
T Consensus       148 ~~~k~~~~~  156 (234)
T 2hcf_A          148 DRNELPHIA  156 (234)
T ss_dssp             SGGGHHHHH
T ss_pred             CccchHHHH
Confidence             34566544

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.67  E-value=5.6e-17  Score=130.72  Aligned_cols=141  Identities=21%  Similarity=0.183  Sum_probs=95.7

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHh----------CCchH-----HHHHHHHhc
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKI----------GGGKE-----RMTAYFNKT  138 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~  138 (241)
                      ++++|+|+||+||||+|+... +..++.++++++|....  .+.+...+..          +....     .+.......
T Consensus         3 ~~~~k~i~fD~DGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (240)
T 3smv_A            3 LTDFKALTFDCYGTLIDWETG-IVNALQPLAKRTGKTFT--SDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEW   79 (240)
T ss_dssp             GGGCSEEEECCBTTTBCHHHH-HHHHTHHHHHHHTCCCC--HHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHT
T ss_pred             CccceEEEEeCCCcCcCCchh-HHHHHHHHHHHhCCCCC--HHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHh
Confidence            356899999999999999985 77889999999887753  3333332110          00111     111112222


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026252          139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (241)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~  218 (241)
                      +.+    ...+.            .+.|....  ....++||+.++|+.|++ |++++++||+....+...++.+  ..+
T Consensus        80 ~~~----~~~~~------------~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l--~~~  138 (240)
T 3smv_A           80 GLE----PDAAE------------REEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKL--GVE  138 (240)
T ss_dssp             TCC----CCHHH------------HHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTT--CSC
T ss_pred             CCC----CCHHH------------HHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhc--CCc
Confidence            221    11111            11121111  226899999999999999 8999999999998888888874  468


Q ss_pred             cccceEEecCCCCCCCCCCCCC
Q 026252          219 AEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       219 f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      |+  .++++++++..||+|++|
T Consensus       139 fd--~i~~~~~~~~~KP~~~~~  158 (240)
T 3smv_A          139 FD--HIITAQDVGSYKPNPNNF  158 (240)
T ss_dssp             CS--EEEEHHHHTSCTTSHHHH
T ss_pred             cC--EEEEccccCCCCCCHHHH
Confidence            88  899999999999999865

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.67  E-value=1.2e-16  Score=128.58  Aligned_cols=146  Identities=16%  Similarity=0.038  Sum_probs=96.0

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCH-HHHHHH--------HHhCCchH---HHHHHHH-hcCCCC
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV-DLYGEL--------LKIGGGKE---RMTAYFN-KTGWPE  142 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~--------~~~~~~~~---~~~~~~~-~~~~~~  142 (241)
                      ++|+|+||+||||+|+.+. +..++.++++++|....... ..+...        ...|....   .....+. ..+.  
T Consensus         3 m~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--   79 (235)
T 2om6_A            3 EVKLVTFDVWNTLLDLNIM-LDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV--   79 (235)
T ss_dssp             CCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTC--
T ss_pred             CceEEEEeCCCCCCCcchh-HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCC--
Confidence            5899999999999999885 77788999998876532100 111110        00022222   1222211 1111  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCCCCc
Q 026252          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGPERA  219 (241)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~~~f  219 (241)
                          ......+.        .+.+...+..  ..++||+.++|+.|+++|++++++||+.   ...+...++.+++..+|
T Consensus        80 ----~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f  145 (235)
T 2om6_A           80 ----DVELVKRA--------TARAILNVDE--SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI  145 (235)
T ss_dssp             ----CHHHHHHH--------HHHHHHHCCG--GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC
T ss_pred             ----CHHHHHHH--------HHHHHHhccc--cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh
Confidence                11111111        1112222222  2359999999999999999999999999   99999999999999999


Q ss_pred             ccceEEecCCCCCCCCCCCCC
Q 026252          220 EKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       220 ~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      +  .++++++++..||+|++|
T Consensus       146 ~--~~~~~~~~~~~kp~~~~~  164 (235)
T 2om6_A          146 D--KTFFADEVLSYKPRKEMF  164 (235)
T ss_dssp             S--EEEEHHHHTCCTTCHHHH
T ss_pred             h--hheeccccCCCCCCHHHH
Confidence            8  789999999999998765

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.66  E-value=2.5e-16  Score=125.62  Aligned_cols=148  Identities=21%  Similarity=0.242  Sum_probs=101.3

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHH-HHhcCCCCCCCCCHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAY-FNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      +|+|+||+||||+|+... +..++.++++++|... .....+..  ..|......... +...+.    ....+...++.
T Consensus         2 ~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~-~~~~~~~~--~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~   73 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEY-HFRAWKALAEEIGING-VDRQFNEQ--LKGVSREDSLQKILDLADK----KVSAEEFKELA   73 (221)
T ss_dssp             CCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCC-CSHHHHTT--TTTCCHHHHHHHHHHHTTC----CCCHHHHHHHH
T ss_pred             CcEEEECCCCcccCChHH-HHHHHHHHHHHcCCCC-CCHHHHHH--hCCCCHHHHHHHHHHHhCC----CCChHHHHHHH
Confidence            799999999999999885 7778999999987651 22233322  244444444333 333332    12333333333


Q ss_pred             HHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~-~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ..+    .+.+...... ....++||+.++|+.|+++|++++++||.  ..+...++.+++..+|+  .++++++++..|
T Consensus        74 ~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~--~~~~~~~~~~~K  145 (221)
T 2wf7_A           74 KRK----NDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD--AIADPAEVAASK  145 (221)
T ss_dssp             HHH----HHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS--EECCTTTSSSCT
T ss_pred             HHH----HHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc--eEeccccCCCCC
Confidence            322    2333332222 12568899999999999999999999998  45677888889888998  788999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       146 p~~~~~  151 (221)
T 2wf7_A          146 PAPDIF  151 (221)
T ss_dssp             TSSHHH
T ss_pred             CChHHH
Confidence            999765

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.66  E-value=1.1e-16  Score=126.46  Aligned_cols=141  Identities=17%  Similarity=0.109  Sum_probs=92.9

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHH----HhC-CchHHHHHHHHhcCCCCCCCCCHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELL----KIG-GGKERMTAYFNKTGWPEKAPSDEE  149 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~  149 (241)
                      |++|+|+||+||||+|+..  ...++..+++++|..... ........    ..+ .........+... ..  .....+
T Consensus         2 M~~k~viFDlDGTL~d~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~   75 (200)
T 3cnh_A            2 MTIKALFWDIGGVLLTNGW--DREQRADVAQRFGLDTDD-FTERHRLAAPELELGRMTLAEYLEQVVFY-QP--RDFTPE   75 (200)
T ss_dssp             CCCCEEEECCBTTTBCCSS--CHHHHHHHHHHHTCCHHH-HHHHHHHHHHHHHTTSSCHHHHHHHHTTT-SC--CSSCHH
T ss_pred             CCceEEEEeCCCeeECCCc--chHHHHHHHHHcCCCHHH-HHHHHHhhchHHHcCCcCHHHHHHHHHHH-cC--CCCCHH
Confidence            3589999999999999885  345788888888765321 11111110    011 1112212211110 00  000110


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCC
Q 026252          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (241)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~  229 (241)
                                     .+.+.+... ..++||+.++|+.|+++| +++++||+....+...++.+|+..+|+  .++++++
T Consensus        76 ---------------~~~~~~~~~-~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~--~~~~~~~  136 (200)
T 3cnh_A           76 ---------------DFRAVMEEQ-SQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLL--AFFTSSA  136 (200)
T ss_dssp             ---------------HHHHHHHHT-CCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCS--CEEEHHH
T ss_pred             ---------------HHHHHHHhc-CccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcc--eEEeecc
Confidence                           111111122 569999999999999999 999999999999999999999999998  7899999


Q ss_pred             CCCCCCCCCCC
Q 026252          230 VPRKKPDPLCC  240 (241)
Q Consensus       230 ~~~~KP~p~~f  240 (241)
                      ++..||+|++|
T Consensus       137 ~~~~Kp~~~~~  147 (200)
T 3cnh_A          137 LGVMKPNPAMY  147 (200)
T ss_dssp             HSCCTTCHHHH
T ss_pred             cCCCCCCHHHH
Confidence            99999998765

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.66  E-value=5e-16  Score=125.12  Aligned_cols=64  Identities=19%  Similarity=0.183  Sum_probs=60.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+....+...++.+|+..+|+  .++++++++..||+|++|
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~  161 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD--HVLSVDAVRLYKTAPAAY  161 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS--EEEEGGGTTCCTTSHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC--EEEEecccCCCCcCHHHH
Confidence            6889999999999999999999999999999999999999999998  899999999999999765

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.66  E-value=7.4e-16  Score=122.98  Aligned_cols=148  Identities=20%  Similarity=0.344  Sum_probs=101.3

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  154 (241)
                      ++|+|+||+||||+++... +..++.++++++|..... .+.+..  ..|.........+. ..++.   ...   .+++
T Consensus         8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~---~~~---~~~~   77 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISR-RNELPD--TLGLRIDMVVDLWYARQPWN---GPS---RQEV   77 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGG-GGGSCC--CTTCCHHHHHHHHHHHSCCS---SSC---HHHH
T ss_pred             CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCCCh-HHHHHH--HhCCCHHHHHHHHHHHcCCC---ccC---HHHH
Confidence            5899999999999999885 667888999988775321 111111  13444444333322 22221   111   2222


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ...+...    +.+.+... ..++||+.++|+.|++.|++++++||.....++..++.+++..+|+  .++++++++..|
T Consensus        78 ~~~~~~~----~~~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~k  150 (226)
T 1te2_A           78 VERVIAR----AISLVEET-RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKLPYSK  150 (226)
T ss_dssp             HHHHHHH----HHHHHHHH-CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTSSCCT
T ss_pred             HHHHHHH----HHHHHhcc-CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc--EEEeccccCCCC
Confidence            2222222    22222222 6789999999999999999999999999999999999999988998  789999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       151 p~~~~~  156 (226)
T 1te2_A          151 PHPQVY  156 (226)
T ss_dssp             TSTHHH
T ss_pred             CChHHH
Confidence            998654

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.64  E-value=6e-16  Score=124.25  Aligned_cols=65  Identities=18%  Similarity=0.171  Sum_probs=60.6

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ...++||+.++|+.|+++|++++++||+....+...++.+++..+|+  .++++++++..||+|++|
T Consensus        94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~kp~~~~~  158 (230)
T 3um9_A           94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD--HLISVDEVRLFKPHQKVY  158 (230)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEGGGTTCCTTCHHHH
T ss_pred             cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc--eeEehhhcccCCCChHHH
Confidence            37899999999999999999999999999999999999999999998  899999999999998765

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.64  E-value=5.7e-16  Score=122.96  Aligned_cols=131  Identities=14%  Similarity=0.134  Sum_probs=89.1

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      ++++|+|+||+||||+|+...     |.++++++|.....  +....+              ...        .... .+
T Consensus         3 ~~~~k~iifDlDGTL~d~~~~-----~~~~~~~~g~~~~~--~~~~~~--------------~~~--------~~~~-~~   52 (205)
T 3m9l_A            3 LSEIKHWVFDMDGTLTIAVHD-----FAAIREALSIPAED--DILTHL--------------AAL--------PADE-SA   52 (205)
T ss_dssp             GGGCCEEEECTBTTTEEEEEC-----HHHHHHHTTCCTTS--CHHHHH--------------HHS--------CHHH-HH
T ss_pred             cccCCEEEEeCCCcCcccHHH-----HHHHHHHhCCCchH--HHHHHH--------------hcC--------ChHH-HH
Confidence            456899999999999998764     45677777776542  111111              110        0110 11


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      ....+.    +.+...+. ....++||+.++|+.|+++|++++++||+....++..++.+|+..+|+.+.+++++. +..
T Consensus        53 ~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~  126 (205)
T 3m9l_A           53 AKHAWL----LEHERDLA-QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APP  126 (205)
T ss_dssp             HHHHHH----HHTHHHHE-EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCC
T ss_pred             HHHHHH----HHHHHHHh-hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCC
Confidence            111111    11112122 236889999999999999999999999999999999999999999993216777666 899


Q ss_pred             CCCCCCC
Q 026252          234 KPDPLCC  240 (241)
Q Consensus       234 KP~p~~f  240 (241)
                      ||+|++|
T Consensus       127 kp~~~~~  133 (205)
T 3m9l_A          127 KPHPGGL  133 (205)
T ss_dssp             TTSSHHH
T ss_pred             CCCHHHH
Confidence            9999765

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.64  E-value=1.8e-15  Score=124.68  Aligned_cols=150  Identities=16%  Similarity=0.235  Sum_probs=100.5

Q ss_pred             CCCcEEEEecCcccccCcc-chHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-----------hcCCCC
Q 026252           75 VLPSALLFDCDGVLVDTEK-DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-----------KTGWPE  142 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  142 (241)
                      |++|+|+||+||||+|+.. . +..++.++++++|....  .+.+...  .|.........+.           ..+.  
T Consensus         4 m~ik~i~fDlDGTLld~~~~~-~~~~~~~~l~~~G~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~--   76 (267)
T 1swv_A            4 MKIEAVIFAWAGTTVDYGCFA-PLEVFMEIFHKRGVAIT--AEEARKP--MGLLKIDHVRALTEMPRIASEWNRVFRQ--   76 (267)
T ss_dssp             -CCCEEEECSBTTTBSTTCCT-THHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHHHSHHHHHHHHHHHSS--
T ss_pred             CCceEEEEecCCCEEeCCCcc-HHHHHHHHHHHcCCCCC--HHHHHHH--hccchHHHHHHhcccHHHHHHHHHHhCC--
Confidence            4589999999999999987 4 56789999999887642  3333322  3333322222111           1111  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc-cc
Q 026252          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EK  221 (241)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f-~~  221 (241)
                        ....+...++...+    .+.+...... ...++||+.++|+.|+++|++++++||.....+...++.+++..+| + 
T Consensus        77 --~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~-  148 (267)
T 1swv_A           77 --LPTEADIQEMYEEF----EEILFAILPR-YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-  148 (267)
T ss_dssp             --CCCHHHHHHHHHHH----HHHHHHHGGG-GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-
T ss_pred             --CCCHHHHHHHHHHH----HHHHHHhhcc-ccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChH-
Confidence              11222222222222    2222222222 3678999999999999999999999999989999999998887776 6 


Q ss_pred             ceEEecCCCCCCCCCCCCC
Q 026252          222 IQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       222 ~~iv~s~~~~~~KP~p~~f  240 (241)
                       .++++++++..||+|++|
T Consensus       149 -~~~~~~~~~~~kp~~~~~  166 (267)
T 1swv_A          149 -FLVTPDDVPAGRPYPWMC  166 (267)
T ss_dssp             -CCBCGGGSSCCTTSSHHH
T ss_pred             -heecCCccCCCCCCHHHH
Confidence             788888889999998754

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.64  E-value=4.6e-16  Score=139.65  Aligned_cols=146  Identities=16%  Similarity=0.135  Sum_probs=88.7

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHH-H
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERK-Q  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  153 (241)
                      |++|+|+||+||||++...   ..++.......+....    .....+...........+....       ...+... .
T Consensus         1 M~~k~viFD~DGTL~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~   66 (555)
T 3i28_A            1 MTLRAAVFDLDGVLALPAV---FGVLGRTEEALALPRG----LLNDAFQKGGPEGATTRLMKGE-------ITLSQWIPL   66 (555)
T ss_dssp             ---CEEEECTBTTTEESCT---HHHHHHHHHHTTCCTT----HHHHHHHTTGGGSHHHHHHTTS-------SCHHHHHHH
T ss_pred             CceEEEEEecCCeeecchh---HHHHHHHHHHhCCcHH----HHHHHHhccCcccchhHHhcCC-------CCHHHHHHH
Confidence            3589999999999997774   3467777777766532    2222222222222222222211       1111111 1


Q ss_pred             HHHHHHHH-------------HHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCC------cHHHHHHHHHHhc
Q 026252          154 FIASLHKR-------------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTS------NEKAVTAIVSFLL  214 (241)
Q Consensus       154 ~~~~~~~~-------------~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~------~~~~~~~~l~~l~  214 (241)
                      +...+...             ..+.+......  ..++||+.++|+.|+++|++++|+||+      ....+...+.  +
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~  142 (555)
T 3i28_A           67 MEENCRKCSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--E  142 (555)
T ss_dssp             HHHHHHHHHHHTTCCCCTTCCHHHHHHHHHHH--CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--H
T ss_pred             HHHHHHHhhhccCCCCCccccHHHHHHHhHhh--cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--h
Confidence            11111110             23333333333  689999999999999999999999998      4444444333  5


Q ss_pred             CCCCcccceEEecCCCCCCCCCCCCC
Q 026252          215 GPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       215 ~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      +..+|+  .++++++++..||+|++|
T Consensus       143 l~~~fd--~i~~~~~~~~~KP~p~~~  166 (555)
T 3i28_A          143 LKMHFD--FLIESCQVGMVKPEPQIY  166 (555)
T ss_dssp             HHTTSS--EEEEHHHHTCCTTCHHHH
T ss_pred             hhhhee--EEEeccccCCCCCCHHHH
Confidence            667898  899999999999999887

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.64  E-value=5.5e-16  Score=125.03  Aligned_cols=64  Identities=22%  Similarity=0.267  Sum_probs=59.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+....+...++.+++..+|+  .++++++++..||+|++|
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~  157 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVY  157 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh--eEEEecccCCCCCCHHHH
Confidence            6789999999999999999999999999999999999999999998  789999999999998765

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.63  E-value=1.1e-15  Score=124.11  Aligned_cols=64  Identities=22%  Similarity=0.262  Sum_probs=60.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+....+...++.+|+..+|+  .++++++++..||+|++|
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~  167 (240)
T 2no4_A          104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD--SCLSADDLKIYKPDPRIY  167 (240)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGTTCCTTSHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC--EEEEccccCCCCCCHHHH
Confidence            6899999999999999999999999999999999999999999998  899999999999998765

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.61  E-value=6.9e-16  Score=124.63  Aligned_cols=146  Identities=15%  Similarity=0.108  Sum_probs=88.4

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHH-HH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEER-KQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  153 (241)
                      +++|+|+||+||||+|+...    .+.+.+.++|....  .+.+..+.  +   ......+. .+.     ...... +.
T Consensus        26 ~~ik~viFD~DGTL~d~~~~----~~~~~~~~~g~~~~--~~~~~~~~--~---~~~~~~~~-~g~-----~~~~~~~~~   88 (229)
T 4dcc_A           26 KGIKNLLIDLGGVLINLDRE----RCIENFKKIGFQNI--EEKFCTHQ--L---DGIFLQQE-KGL-----ITPAEFRDG   88 (229)
T ss_dssp             CCCCEEEECSBTTTBCBCHH----HHHHHHHHHTCTTH--HHHHHHTH--H---HHHHHHHH-TTC-----SCHHHHHHH
T ss_pred             CCCCEEEEeCCCeEEeCChH----HHHHHHHHhCCCcH--HHHHHHhc--C---cHHHHHHH-CCC-----CCHHHHHHH
Confidence            45899999999999998742    56677777776521  22222210  0   01111111 010     011111 11


Q ss_pred             HHHHHHH-HHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH------HHhcCCCCcccceEEe
Q 026252          154 FIASLHK-RKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV------SFLLGPERAEKIQIFA  226 (241)
Q Consensus       154 ~~~~~~~-~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l------~~l~~~~~f~~~~iv~  226 (241)
                      +.+.+.. ...+.+.+.+......++||+.++|+.|+++ ++++|+||+....+..++      +.+++..+|+  .+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd--~i~~  165 (229)
T 4dcc_A           89 IREMMGKMVSDKQIDAAWNSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFE--KTYL  165 (229)
T ss_dssp             HHHHHTSCCCHHHHHHHHHTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCS--EEEE
T ss_pred             HHHHhCCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCC--EEEe
Confidence            1111000 0001111222222246789999999999998 999999999988888665      6667777898  8999


Q ss_pred             cCCCCCCCCCCCCC
Q 026252          227 GDVVPRKKPDPLCC  240 (241)
Q Consensus       227 s~~~~~~KP~p~~f  240 (241)
                      +++++..||+|++|
T Consensus       166 ~~~~~~~KP~~~~~  179 (229)
T 4dcc_A          166 SYEMKMAKPEPEIF  179 (229)
T ss_dssp             HHHHTCCTTCHHHH
T ss_pred             ecccCCCCCCHHHH
Confidence            99999999999875

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.61  E-value=2.1e-16  Score=125.63  Aligned_cols=63  Identities=13%  Similarity=0.060  Sum_probs=57.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH------hcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF------LLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~------l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|++ |++++++||+....+..+++.      +++..+|+  .++++++++..||+|++|
T Consensus        88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~  156 (211)
T 2i6x_A           88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFD--KVYASCQMGKYKPNEDIF  156 (211)
T ss_dssp             EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSS--EEEEHHHHTCCTTSHHHH
T ss_pred             cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcC--eEEeecccCCCCCCHHHH
Confidence            4788999999999999 999999999999999999888      78888898  889999999999998765

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.61  E-value=2.3e-15  Score=123.06  Aligned_cols=143  Identities=14%  Similarity=0.014  Sum_probs=92.5

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHH---HhhcCCC--CCC----HHHHHHHHHhCCchHHHHHHHHh-----cCCC
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTF---KEKELGV--TWD----VDLYGELLKIGGGKERMTAYFNK-----TGWP  141 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~---~~~g~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  141 (241)
                      ++|+|+||+||||+|+... +..++.+++   .++|...  ...    ...+......|.+...+...+..     .+. 
T Consensus        12 ~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-   89 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA-   89 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT-
T ss_pred             ceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC-
Confidence            5899999999999999985 767888777   4566654  111    11222212346655554443321     111 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCccc
Q 026252          142 EKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEK  221 (241)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~  221 (241)
                         ........    .+    .+.|.+... ....++||+.++|+.|+ +|++++++||+....+...++.+++..+|+ 
T Consensus        90 ---~~~~~~~~----~~----~~~~~~~~~-~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~-  155 (251)
T 2pke_A           90 ---RIEARDIQ----RI----VEIGRATLQ-HPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP-  155 (251)
T ss_dssp             ---CCCHHHHH----HH----HHHHHHHHT-CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-
T ss_pred             ---CCChHHHH----HH----HHHHHHHHh-ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-
Confidence               11122222    22    222222222 33688999999999999 899999999999999999999999989998 


Q ss_pred             ceEEecCCCCCCCCCCCCC
Q 026252          222 IQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       222 ~~iv~s~~~~~~KP~p~~f  240 (241)
                       .++++     .||+|++|
T Consensus       156 -~i~~~-----~kp~~~~~  168 (251)
T 2pke_A          156 -RIEVV-----SEKDPQTY  168 (251)
T ss_dssp             -CEEEE-----SCCSHHHH
T ss_pred             -eeeee-----CCCCHHHH
Confidence             56663     57887654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.60  E-value=3.1e-16  Score=127.99  Aligned_cols=153  Identities=18%  Similarity=0.082  Sum_probs=97.4

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      .|++|+|+||+||||+|+... +..++.++++++|.....  +.+...+ .+............. ..  .........+
T Consensus        19 ~m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~--~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~   91 (254)
T 3umc_A           19 FQGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGTLPC--VELTDRW-RQQYKPAMDRVRNGQ-AP--WQHLDQLHRQ   91 (254)
T ss_dssp             SSSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSCCCH--HHHHHHH-HHHTHHHHHHHHTTS-SC--CCCHHHHHHH
T ss_pred             ccCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCCCCH--HHHHHHH-HHHHHHHHHHHhccc-CC--cccHHHHHHH
Confidence            367999999999999999885 778899999999876542  3222221 222222222222111 00  0111111111


Q ss_pred             HHHHHHHH--------HHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEE
Q 026252          154 FIASLHKR--------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF  225 (241)
Q Consensus       154 ~~~~~~~~--------~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv  225 (241)
                      .+..+...        ..+.+...+  ....++||+.++|+.|+++ ++++++||.....+..+++.+|+.  |+  .++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~--~~~  164 (254)
T 3umc_A           92 SLEALAGEFGLALDEALLQRITGFW--HRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WD--MLL  164 (254)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHGGG--GSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CS--EEC
T ss_pred             HHHHHHHHhCCCCCHHHHHHHHHHH--hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cc--eEE
Confidence            11111111        011111111  2367899999999999986 999999999999999999999774  77  788


Q ss_pred             ecCCCCCCCCCCCCC
Q 026252          226 AGDVVPRKKPDPLCC  240 (241)
Q Consensus       226 ~s~~~~~~KP~p~~f  240 (241)
                      ++++++..||+|++|
T Consensus       165 ~~~~~~~~kp~~~~~  179 (254)
T 3umc_A          165 CADLFGHYKPDPQVY  179 (254)
T ss_dssp             CHHHHTCCTTSHHHH
T ss_pred             eecccccCCCCHHHH
Confidence            999999999998765

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.59  E-value=1.7e-15  Score=126.06  Aligned_cols=142  Identities=22%  Similarity=0.172  Sum_probs=98.3

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      ++|+|+||+||||+|+... +..++.++++++|.   ...+.+... ..|.........+....      ...+..    
T Consensus        34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~---~~~~~~~~~-~~G~~~~~~~~~~~~~~------~~~~~~----   98 (275)
T 2qlt_A           34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPY---FDAEHVIHI-SHGWRTYDAIAKFAPDF------ADEEYV----   98 (275)
T ss_dssp             EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTT---CCHHHHHHH-CTTCCHHHHHHHHCGGG------CCHHHH----
T ss_pred             cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCC---CCHHHHHHH-hcCCCHHHHHHHHhccC------CcHHHH----
Confidence            4899999999999999985 77788999888773   222332221 24555544444432211      112222    


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~-gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ..+..    .+.+... ....++||+.++|+.|+++ |++++++||+....+...++.+++. +|+  .++++++++..|
T Consensus        99 ~~~~~----~~~~~~~-~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~--~i~~~~~~~~~k  170 (275)
T 2qlt_A           99 NKLEG----EIPEKYG-EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPE--YFITANDVKQGK  170 (275)
T ss_dssp             HHHHH----THHHHHC-TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCS--SEECGGGCSSCT
T ss_pred             HHHHH----HHHHHHh-cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccC--EEEEcccCCCCC
Confidence            22222    2222221 2367899999999999999 9999999999999999999999775 576  788999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       171 p~~~~~  176 (275)
T 2qlt_A          171 PHPEPY  176 (275)
T ss_dssp             TSSHHH
T ss_pred             CChHHH
Confidence            999765

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.59  E-value=1.1e-15  Score=124.18  Aligned_cols=153  Identities=16%  Similarity=0.132  Sum_probs=98.2

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      ++++|+|+||+||||+|+... +..++.++++++|....  ...+... +.+.............  .. .........+
T Consensus        12 ~~~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~--~~~~~~~-~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~   84 (254)
T 3umg_A           12 GRNVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLEVD--AVAFADR-WRARYQPSMDAILSGA--RE-FVTLDILHRE   84 (254)
T ss_dssp             CSBCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHH-HHTTHHHHHHHHHTTS--SC-CCCHHHHHHH
T ss_pred             CCCceEEEEeCCCceecCchH-HHHHHHHHHHHhcCCCC--HHHHHHH-HHHhHHHHHHHHHhcC--CC-CCCHHHHHHH
Confidence            457899999999999999885 77889999999987654  2333222 1332222222222111  00 0011111111


Q ss_pred             HHHHHHHH-----------HHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccc
Q 026252          154 FIASLHKR-----------KTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI  222 (241)
Q Consensus       154 ~~~~~~~~-----------~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~  222 (241)
                      .+..+...           ..+.+...+  ....++||+.++|+.|+++ ++++++||+....+..+++.+|+.  |+  
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~--  157 (254)
T 3umg_A           85 NLDFVLRESGIDPTNHDSGELDELARAW--HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WD--  157 (254)
T ss_dssp             HHHHHHHHTTCCGGGSCHHHHHHHHGGG--GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CS--
T ss_pred             HHHHHHHHhCCCcCcCCHHHHHHHHHHH--hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--ee--
Confidence            11111110           011111111  2368899999999999997 999999999999999999999875  77  


Q ss_pred             eEEecCCCCCCCCCCCCC
Q 026252          223 QIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       223 ~iv~s~~~~~~KP~p~~f  240 (241)
                      .++++++++..||+|++|
T Consensus       158 ~~~~~~~~~~~kp~~~~~  175 (254)
T 3umg_A          158 VIIGSDINRKYKPDPQAY  175 (254)
T ss_dssp             CCCCHHHHTCCTTSHHHH
T ss_pred             EEEEcCcCCCCCCCHHHH
Confidence            788999999999998765

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.59  E-value=5.8e-15  Score=118.36  Aligned_cols=144  Identities=17%  Similarity=0.204  Sum_probs=98.7

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-HhcCCCCCCCCCHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  153 (241)
                      +++|+|+||+||||+|+... +..++.++++++|..... .+.+...  .+.........+ ...+..    ........
T Consensus         2 ~~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~----~~~~~~~~   73 (229)
T 2fdr_A            2 SGFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYPISV-EEMGERF--AGMTWKNILLQVESEASIP----LSASLLDK   73 (229)
T ss_dssp             -CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCCH-HHHHHHH--TTCCHHHHHHHHHHHHCCC----CCTHHHHH
T ss_pred             CCccEEEEcCCCCcCccHHH-HHHHHHHHHHHhCCCCCH-HHHHHHH--hCCCHHHHHHHHHHHcCCC----CCHHHHHH
Confidence            45899999999999999985 677889999998876431 2333332  455555544433 233322    11222222


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc-ccceEEecCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA-EKIQIFAGDVVPR  232 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f-~~~~iv~s~~~~~  232 (241)
                          +...    +...... ...++||+.++|+.|+.   +++++||+....+...++.+++..+| +  .++++++++.
T Consensus        74 ----~~~~----~~~~~~~-~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~--~~~~~~~~~~  139 (229)
T 2fdr_A           74 ----SEKL----LDMRLER-DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP--HIYSAKDLGA  139 (229)
T ss_dssp             ----HHHH----HHHHHHH-HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT--CEEEHHHHCT
T ss_pred             ----HHHH----HHHHhhc-CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccc--eEEecccccc
Confidence                2221    2111111 16789999999998874   89999999999999999999998889 7  7889888888


Q ss_pred             C--CCCCCCC
Q 026252          233 K--KPDPLCC  240 (241)
Q Consensus       233 ~--KP~p~~f  240 (241)
                      .  ||+|++|
T Consensus       140 ~~~kpk~~~~  149 (229)
T 2fdr_A          140 DRVKPKPDIF  149 (229)
T ss_dssp             TCCTTSSHHH
T ss_pred             CCCCcCHHHH
Confidence            8  9998764

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.58  E-value=1.9e-16  Score=125.41  Aligned_cols=64  Identities=23%  Similarity=0.289  Sum_probs=55.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-hcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~-l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+....+...++. +|+..+|+  .++++++++..||+|++|
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~  154 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIY  154 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHH
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhee--eEEEecccCCCCCCHHHH
Confidence            57899999999999999999999999987776666666 67777888  789999999999998765

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.57  E-value=3e-15  Score=120.43  Aligned_cols=63  Identities=19%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++ ++++++||+....+...++.+|+..+|+  .++++++++..||+|++|
T Consensus        99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~--~~~~~~~~~~~kp~~~~~  161 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD--SITTSEEAGFFKPHPRIF  161 (234)
T ss_dssp             CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEHHHHTBCTTSHHHH
T ss_pred             CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc--eeEeccccCCCCcCHHHH
Confidence            68899999999999999 9999999999999999999999999998  899999999999998764

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.57  E-value=4.3e-16  Score=123.27  Aligned_cols=62  Identities=18%  Similarity=0.101  Sum_probs=57.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.+ |+.|+++ ++++|+||+....++..++.+|+..+|+  .++++++++..||+|++|
T Consensus        73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~~~~Kp~~~~~  134 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK--GIFSAESVKEYKPSPKVY  134 (201)
T ss_dssp             CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTCHHHH
T ss_pred             cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc--EEEehhhcCCCCCCHHHH
Confidence            688999999 9999999 9999999999999999999999999998  789999999999998765

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.57  E-value=8.6e-15  Score=121.91  Aligned_cols=145  Identities=10%  Similarity=0.017  Sum_probs=90.1

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhh---cCCCCCCHHHHHHHHH--hCCchHHHHHHHHhcCCCCCCCCCHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK---ELGVTWDVDLYGELLK--IGGGKERMTAYFNKTGWPEKAPSDEE  149 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (241)
                      .++|+|+||+||||+++... +..++..++.++   +....  .........  .......+...+...++      ...
T Consensus        55 ~~~k~i~FDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~  125 (282)
T 3nuq_A           55 PNLKVFFFDIDNCLYKSSTR-IHDLMQQSILRFFQTHLKLS--PEDAHVLNNSYYKEYGLAIRGLVMFHKV------NAL  125 (282)
T ss_dssp             CCCCEEEECCTTTTSCCCHH-HHHHHHHHHHHHHHHCTTSC--HHHHHHHHHHHHHHTHHHHHHHHHTTSS------CHH
T ss_pred             CCCCEEEEecCCCcccCCcc-HHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHhhhHHHHHHHcCC------CHH
Confidence            46899999999999999874 555566665553   12222  222221110  00001112222222221      111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCC--eEEEEeCCcHHHHHHHHHHhcCCCCcccceEEec
Q 026252          150 ERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV--KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi--~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                      .   +...+.    +.. .  ......++||+.++|+.|+++|+  +++|+||+....+...++.+|+..+|+  .++++
T Consensus       126 ~---~~~~~~----~~~-~--~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd--~v~~~  193 (282)
T 3nuq_A          126 E---YNRLVD----DSL-P--LQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFD--GLTYC  193 (282)
T ss_dssp             H---HHHHHT----TTS-C--GGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCS--EEECC
T ss_pred             H---HHHHHh----hhh-h--hhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccc--eEEEe
Confidence            1   111111    000 0  01237899999999999999999  999999999999999999999999999  78877


Q ss_pred             CCC----CCCCCCCCCC
Q 026252          228 DVV----PRKKPDPLCC  240 (241)
Q Consensus       228 ~~~----~~~KP~p~~f  240 (241)
                      ++.    ...||+|++|
T Consensus       194 ~~~~~~~~~~Kp~~~~~  210 (282)
T 3nuq_A          194 DYSRTDTLVCKPHVKAF  210 (282)
T ss_dssp             CCSSCSSCCCTTSHHHH
T ss_pred             ccCCCcccCCCcCHHHH
Confidence            765    4569998765

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.56  E-value=5.5e-15  Score=121.17  Aligned_cols=62  Identities=19%  Similarity=0.184  Sum_probs=57.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+  |++++|+||+....+...++.+|+..+|+  .++++++++..||+|++|
T Consensus        92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~Kp~~~~~  153 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSY  153 (253)
T ss_dssp             CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHH
T ss_pred             CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhcc--EEEEccccCCCCCCHHHH
Confidence            688999999999998  89999999999999999999999999998  899999999999998765

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.54  E-value=8.6e-14  Score=113.15  Aligned_cols=60  Identities=13%  Similarity=0.096  Sum_probs=51.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC--------CCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR--------KKPDPLC  239 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~--------~KP~p~~  239 (241)
                      .+++||+.++|+.|+++|++++|+||+....++.+++  ++.++ +  .++++++...        .||+|.+
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~--~v~~~~~~~~~~~~~~~~~kp~p~~  143 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-D--RIYCNHASFDNDYIHIDWPHSCKGT  143 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-G--GEEEEEEECSSSBCEEECTTCCCTT
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-C--eEEeeeeEEcCCceEEecCCCCccc
Confidence            6899999999999999999999999999988888888  56565 5  6888877554        8999983

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.53  E-value=4.6e-16  Score=126.16  Aligned_cols=128  Identities=13%  Similarity=0.097  Sum_probs=79.8

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCH-HHHHHHHH-hCCc-hHHHHHHHHhcCCCCCCCCCHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDV-DLYGELLK-IGGG-KERMTAYFNKTGWPEKAPSDEEER  151 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  151 (241)
                      .++|+|+||+||||+|+.+. +..+|+++++++|....... ..+..+.. .|.. .......+.... .     .+.  
T Consensus         9 ~~~k~viFDlDGTL~ds~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-----~~~--   79 (231)
T 2p11_A            9 PHDIVFLFDCDNTLLDNDHV-LADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQ-P-----RDT--   79 (231)
T ss_dssp             CCSEEEEECCBTTTBCHHHH-HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHC-T-----TCT--
T ss_pred             CCCeEEEEcCCCCCEecHHH-HHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhcc-c-----cch--
Confidence            46799999999999999985 77899999999875421100 00111111 2221 111111111100 0     000  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                            ..+.+.+.|....  ....++||+.++|+.|+++| +++|+||+....++..++.+|+.++|+
T Consensus        80 ------~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~  139 (231)
T 2p11_A           80 ------RLLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE  139 (231)
T ss_dssp             ------GGGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT
T ss_pred             ------HHHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC
Confidence                  0011112222211  12578999999999999999 999999999999999999999888887

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.53  E-value=7.3e-15  Score=118.18  Aligned_cols=116  Identities=20%  Similarity=0.224  Sum_probs=73.0

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCC--chHHHHH-HHHhcCCCCCCCCCHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGG--GKERMTA-YFNKTGWPEKAPSDEEER  151 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~  151 (241)
                      +++|+|+||+||||+|++.      +..+++.+|...... +.+...  .+.  ....... .+...      ...    
T Consensus        12 ~~~k~viFD~DGTLvd~~~------~~~~~~~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~------~~~----   72 (225)
T 1nnl_A           12 YSADAVCFDVDSTVIREEG------IDELAKICGVEDAVS-EMTRRA--MGGAVPFKAALTERLALI------QPS----   72 (225)
T ss_dssp             HHCSEEEEETBTTTBSSCH------HHHHHHHTTCTTTC---------------CHHHHHHHHHHHH------CCC----
T ss_pred             hhCCEEEEeCccccccccc------HHHHHHHhCCcHHHH-HHHHHH--HcCCccHHHHHHHHHHHh------cCC----
Confidence            4589999999999999874      346677777754322 222222  111  1111111 11100      000    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC--Ccc
Q 026252          152 KQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE--RAE  220 (241)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~--~f~  220 (241)
                                 .+.+.+++.....+++||+.++|+.|+++|++++|+||+....++.+++.+|+..  +|+
T Consensus        73 -----------~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~  132 (225)
T 1nnl_A           73 -----------REQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFA  132 (225)
T ss_dssp             -----------HHHHHHHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE
T ss_pred             -----------HHHHHHHHHhccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEe
Confidence                       1112222333346899999999999999999999999999999999999998873  665

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.52  E-value=4.1e-15  Score=119.47  Aligned_cols=144  Identities=17%  Similarity=0.113  Sum_probs=88.3

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhh---cCCCC-CCHHHHHHHHH----hC----CchHH-----HHHHHHhc
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEK---ELGVT-WDVDLYGELLK----IG----GGKER-----MTAYFNKT  138 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~---g~~~~-~~~~~~~~~~~----~~----~~~~~-----~~~~~~~~  138 (241)
                      |+|+|+||+||||+++... +..+...+.+.+   +.... .....+..+..    ..    .....     ....+...
T Consensus         1 mik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (230)
T 3vay_A            1 MIKLVTFDLDDTLWDTAPA-IVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDA   79 (230)
T ss_dssp             CCCEEEECCBTTTBCSHHH-HHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTT
T ss_pred             CeeEEEecCcccCcCCchH-HHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHh
Confidence            4799999999999999874 555555544433   32211 11222222111    00    00011     11122222


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026252          139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (241)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~  218 (241)
                      +      .......+..+...    +.|....  ....++||+.++|+.|+++ ++++++||+...     ++.+|+..+
T Consensus        80 ~------~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~  141 (230)
T 3vay_A           80 G------YDSDEAQQLADESF----EVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY  141 (230)
T ss_dssp             T------CCHHHHHHHHHHHH----HHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG
T ss_pred             C------CChhhhHHHHHHHH----HHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH
Confidence            2      22333333333333    2333322  2378999999999999998 999999999755     677888899


Q ss_pred             cccceEEecCCCCCCCCCCCCC
Q 026252          219 AEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       219 f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      |+  .++++++++..||+|++|
T Consensus       142 f~--~~~~~~~~~~~kp~~~~~  161 (230)
T 3vay_A          142 FA--FALCAEDLGIGKPDPAPF  161 (230)
T ss_dssp             CS--EEEEHHHHTCCTTSHHHH
T ss_pred             ee--eeEEccccCCCCcCHHHH
Confidence            99  899999999999999765

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.52  E-value=5.3e-15  Score=122.23  Aligned_cols=147  Identities=12%  Similarity=0.052  Sum_probs=81.9

Q ss_pred             CCCcEEEEecCcccccCccc------hHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhc-CCCCCCCCC
Q 026252           75 VLPSALLFDCDGVLVDTEKD------GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT-GWPEKAPSD  147 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~------~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  147 (241)
                      +++++||||+||||+|++..      .+...+...+..+|..... .+.+..+  .+.....+.+.+... +..    ..
T Consensus        29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~--~g~~~~~~~~~l~~~~~~~----~~  101 (253)
T 2g80_A           29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPV-SNILSQF--HIDNKEQLQAHILELVAKD----VK  101 (253)
T ss_dssp             CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHH-HHHHHTT--CCCCHHHHHHHHHHHHHTT----CC
T ss_pred             CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHH-HHHHHHh--hhccHHHHHHHHHHHHhcc----cc
Confidence            35899999999999999752      1223444445544432110 1111111  223344444443321 100    01


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh--c---------CC
Q 026252          148 EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL--L---------GP  216 (241)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l--~---------~~  216 (241)
                      ....+++.   ...+.+.|...  ....+++||+.++|+.    |++++|+||+++..++..++.+  |         +.
T Consensus       102 ~~~~~~~~---~~~~~~~~~~~--~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~  172 (253)
T 2g80_A          102 DPILKQLQ---GYVWAHGYESG--QIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN  172 (253)
T ss_dssp             CHHHHHHH---HHHHHHHHHTT--SCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG
T ss_pred             hHHHHHHH---HHHHHHHHHhC--cccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchH
Confidence            11111111   11122222210  1136889999999988    8999999999999999999876  3         55


Q ss_pred             CCcccceEEecCCCCCCCCCCCCC
Q 026252          217 ERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       217 ~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++|+  .++.+ .+...||+|++|
T Consensus       173 ~~~~--~~f~~-~~~g~KP~p~~~  193 (253)
T 2g80_A          173 SYID--GYFDI-NTSGKKTETQSY  193 (253)
T ss_dssp             GGCC--EEECH-HHHCCTTCHHHH
T ss_pred             hhcc--eEEee-eccCCCCCHHHH
Confidence            6666  44544 331259999887

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.50  E-value=5.4e-14  Score=112.48  Aligned_cols=141  Identities=15%  Similarity=0.054  Sum_probs=87.9

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHH---------HHHhCCchHHHHHH-----HHhcCCCC
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGE---------LLKIGGGKERMTAY-----FNKTGWPE  142 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~-----~~~~~~~~  142 (241)
                      +|+|+||+||||+|+... +..++..+.+.+...-  ....+..         ....+.+.......     ....+.  
T Consensus         8 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   82 (234)
T 3ddh_A            8 IKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYG--TSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNG--   82 (234)
T ss_dssp             CCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGS--CHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTT--
T ss_pred             ccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcC--
Confidence            899999999999999985 6666665655432211  1111111         11233333332111     111111  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCC-CeEEEEeCCcHHHHHHHHHHhcCCCCccc
Q 026252          143 KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEK  221 (241)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~g-i~v~ivTn~~~~~~~~~l~~l~~~~~f~~  221 (241)
                        ....+..+++.+        .+.+.+. ....++||+.++|+.|+++| ++++++||+....+...++.+++.++|+ 
T Consensus        83 --~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~-  150 (234)
T 3ddh_A           83 --KIAADIIRQIVD--------LGKSLLK-MPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD-  150 (234)
T ss_dssp             --CCCHHHHHHHHH--------HHHHHTT-CCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS-
T ss_pred             --CCCHHHHHHHHH--------HHHHHhh-ccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh-
Confidence              122333332222        2222222 34689999999999999999 9999999999999999999999999998 


Q ss_pred             ceEEecCCCCCCCCCCCCC
Q 026252          222 IQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       222 ~~iv~s~~~~~~KP~p~~f  240 (241)
                       .++++     .||+|++|
T Consensus       151 -~~~~~-----~kpk~~~~  163 (234)
T 3ddh_A          151 -HIEVM-----SDKTEKEY  163 (234)
T ss_dssp             -EEEEE-----SCCSHHHH
T ss_pred             -eeeec-----CCCCHHHH
Confidence             56654     47777654

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.50  E-value=5.6e-14  Score=113.35  Aligned_cols=45  Identities=13%  Similarity=0.096  Sum_probs=41.9

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .++||+.++|+.|+++|++++|+||+....++.+++.+|+..++.
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~  136 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIA  136 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEE
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE
Confidence            579999999999999999999999999999999999998876665

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.50  E-value=6.1e-15  Score=117.54  Aligned_cols=64  Identities=19%  Similarity=0.106  Sum_probs=55.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEE----------ecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIF----------AGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv----------~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+....++..++.+|+..+|+  .++          .+.++...||+|++|
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~~~~~~~~~~~~k~k~~~~  147 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFS--NTLIVENDALNGLVTGHMMFSHSKGEML  147 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE--EEEEEETTEEEEEEEESCCSTTHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcc--ceeEEeCCEEEeeeccCCCCCCChHHHH
Confidence            6899999999999999999999999999999999999999998998  555          334556788887654

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.47  E-value=2.5e-14  Score=113.68  Aligned_cols=59  Identities=19%  Similarity=0.262  Sum_probs=49.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||..+..+..+   .+  .+|+  .++++++++..||+|++|
T Consensus        35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~---~~--~~~d--~v~~~~~~~~~KP~p~~~   93 (196)
T 2oda_A           35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL---AA--PVND--WMIAAPRPTAGWPQPDAC   93 (196)
T ss_dssp             GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH---HT--TTTT--TCEECCCCSSCTTSTHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh---cC--ccCC--EEEECCcCCCCCCChHHH
Confidence            57899999999999999999999999987766333   22  4677  789999999999999875

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.44  E-value=3.5e-13  Score=106.78  Aligned_cols=64  Identities=14%  Similarity=0.025  Sum_probs=53.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCC--C-CCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP--R-KKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~--~-~KP~p~~f  240 (241)
                      .+++||+.++|+.|+++ ++++|+||+....++.+++.+|+..+|+. .++++++..  . .||+|++|
T Consensus        68 ~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~-~~~~~~~~~~~~~~~p~p~~~  134 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH-KLEIDDSDRVVGYQLRQKDPK  134 (206)
T ss_dssp             CCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE-EEEECTTSCEEEEECCSSSHH
T ss_pred             cCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc-eeEEcCCceEEeeecCCCchH
Confidence            78999999999999999 99999999999999999999999988832 566666643  2 24887754

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.43  E-value=7.1e-14  Score=119.10  Aligned_cols=64  Identities=13%  Similarity=0.063  Sum_probs=53.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe----------cCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA----------GDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~----------s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|+  .++.          +.++...||+|++|
T Consensus       178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~--~~l~~~dg~~tg~i~~~~~~~kpkp~~~  251 (317)
T 4eze_A          178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS--NTVEIRDNVLTDNITLPIMNAANKKQTL  251 (317)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE--ECEEEETTEEEEEECSSCCCHHHHHHHH
T ss_pred             CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE--EEEEeeCCeeeeeEecccCCCCCCHHHH
Confidence            6899999999999999999999999999999999999999998887  4443          23345667877654

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.43  E-value=2.4e-14  Score=113.48  Aligned_cols=117  Identities=15%  Similarity=0.071  Sum_probs=75.6

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      ++++|+|||||||+|+.+. +..+|++++.+++   ..+.+.+     .+.+.......+           .++..+++.
T Consensus         3 ~~k~viFDlDGTL~Ds~~~-~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~-----------~~~~~~~~~   62 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGG-FLRKFRARFPDQP---FIALEDR-----RGFWVSEQYGRL-----------RPGLSEKAI   62 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHH-HHHHHHHHCTTSC---CCCGGGC-----CSSCHHHHHHHH-----------STTHHHHHH
T ss_pred             CceEEEEeCCCCCccCcHH-HHHHHHHHHhcCC---CCCHHHh-----cCCcHHHHHHhc-----------CHHHHHHHH
Confidence            4689999999999999985 7788999988762   1222222     122222221111           011122221


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHhcCCC-Ccc
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLGPE-RAE  220 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~-gi~v~ivTn~~~~~~~~~l~~l~~~~-~f~  220 (241)
                              +.|.+........++||+.++|+.|+++ |++++|+||+....++..++.+++.+ +|+
T Consensus        63 --------~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~  121 (197)
T 1q92_A           63 --------SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG  121 (197)
T ss_dssp             --------HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC
T ss_pred             --------HHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch
Confidence                    1221110112368999999999999999 99999999998877777888777766 664

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.43  E-value=5.3e-14  Score=110.84  Aligned_cols=64  Identities=17%  Similarity=0.247  Sum_probs=59.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHhcCCCCcccceEEecCCC----CCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAGDVV----PRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---~~~~~~l~~l~~~~~f~~~~iv~s~~~----~~~KP~p~~f  240 (241)
                      .+++||+.++|+.|+++|++++|+||+..   ..+...++.+|+..+|+  .++++++.    +..||+|++|
T Consensus        33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~~~~~KP~p~~~  103 (189)
T 3ib6_A           33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD--FIYASNSELQPGKMEKPDKTIF  103 (189)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE--EEEECCTTSSTTCCCTTSHHHH
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE--EEEEccccccccCCCCcCHHHH
Confidence            68999999999999999999999999986   88999999999999999  88999886    7899999876

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.37  E-value=7.1e-13  Score=104.98  Aligned_cols=65  Identities=15%  Similarity=0.193  Sum_probs=50.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC--CCcccceEEecCC----CCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP--ERAEKIQIFAGDV----VPRKKPDPLC  239 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~--~~f~~~~iv~s~~----~~~~KP~p~~  239 (241)
                      ..++||+.++|+.|+++|++++++||+....++..++.+|+.  .+|....++.++.    +...||+|..
T Consensus        81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (219)
T 3kd3_A           81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDS  151 (219)
T ss_dssp             TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTC
T ss_pred             ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCccc
Confidence            468899999999999999999999999999999999999884  3454222233333    2557887764

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.34  E-value=1.2e-13  Score=108.93  Aligned_cols=111  Identities=16%  Similarity=0.114  Sum_probs=71.2

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIA  156 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (241)
                      .++|+||+||||+|+.+. +..+|+++++  |.+. .+.+.+..+     ........+    ++       +.      
T Consensus         2 ~k~viFDlDGTL~Ds~~~-~~~~~~~~~~--g~~~-~~~~~~~~~-----~~~~~~~~~----~~-------~~------   55 (193)
T 2i7d_A            2 SVRVLVDMDGVLADFEAG-LLRGFRRRFP--EEPH-VPLEQRRGF-----LAREQYRAL----RP-------DL------   55 (193)
T ss_dssp             CEEEEECSBTTTBCHHHH-HHHHHHHHST--TSCC-CCGGGCCSS-----CHHHHHHHH----CT-------TH------
T ss_pred             CcEEEEECCCcCccchhH-HHHHHHHHhc--CCCC-CCHHHHHHh-----hHHHHHHHH----hH-------HH------
Confidence            479999999999999985 7778888876  5541 222332211     011111111    10       01      


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEK-GVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~-gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                        .+.+.+.|.+.......+++||+.++|+.|+++ |++++|+||+....++..++.+|+
T Consensus        56 --~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl  113 (193)
T 2i7d_A           56 --ADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW  113 (193)
T ss_dssp             --HHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred             --HHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence              111222232210112368999999999999999 999999999988888888888876

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.33  E-value=5e-13  Score=110.56  Aligned_cols=63  Identities=13%  Similarity=0.096  Sum_probs=56.8

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .++||+.++|+.|+++|++++++||.....++.+++.+|+.++|+  .++.++.....||.|+.|
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~--~~~~~~k~~~~k~~~~~~  206 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFA--EVLPHEKAEKVKEVQQKY  206 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC--SCCGGGHHHHHHHHHTTS
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhH--hcCHHHHHHHHHHHHhcC
Confidence            688999999999999999999999999999999999999999998  677777777778887765

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.33  E-value=2.5e-12  Score=100.15  Aligned_cols=117  Identities=16%  Similarity=0.174  Sum_probs=67.5

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      ++++||||+||||+|+++. +..+|++   .+|...+  .+.+     .+.+....   +         +...+   ++.
T Consensus         3 m~~~viFD~DGtL~Ds~~~-~~~~~~~---~~g~~~~--~~~~-----~g~~~~~~---~---------~~~~~---~~~   56 (180)
T 3bwv_A            3 TRQRIAIDMDEVLADTLGA-VVKAVNE---RADLNIK--MESL-----NGKKLKHM---I---------PEHEG---LVM   56 (180)
T ss_dssp             CCCEEEEETBTTTBCHHHH-HHHHHHH---HSCCCCC--GGGC-----TTCCC--------------------C---HHH
T ss_pred             cccEEEEeCCCcccccHHH-HHHHHHH---HhCCCCC--HHHH-----cCccHHHH---C---------CchHH---HHH
Confidence            4599999999999999985 6667765   4555432  2222     12221111   0         00000   111


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCC---cH--HHHHHHHHH-hcCCCCcccceEEecCC
Q 026252          156 ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTS---NE--KAVTAIVSF-LLGPERAEKIQIFAGDV  229 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~---~~--~~~~~~l~~-l~~~~~f~~~~iv~s~~  229 (241)
                      +.+       +..... ...+++||+.++|+.|+++ ++++|+||+   ..  ......+.. ++...+|+  .++++++
T Consensus        57 ~~~-------~~~~~~-~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~--~i~~~~~  125 (180)
T 3bwv_A           57 DIL-------KEPGFF-RNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQH--FVFCGRK  125 (180)
T ss_dssp             HHH-------HSTTGG-GSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGG--EEECSCG
T ss_pred             HHH-------hCcchh-ccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCccc--EEEeCCc
Confidence            100       101111 2368999999999999985 999999998   32  222444554 45666666  6777765

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.30  E-value=6e-13  Score=106.88  Aligned_cols=61  Identities=10%  Similarity=0.065  Sum_probs=45.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecC---CCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGD---VVPRKKPDPLCC  240 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~---~~~~~KP~p~~f  240 (241)
                      .++||+.++|+.|+++|++++|+||+....+...++.  +.++|+  .++.+.   +++..||+|++|
T Consensus        88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~--~i~~~~~~~~~~~~KP~p~~~  151 (211)
T 2b82_A           88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFH--IPATNMNPVIFAGDKPGQNTK  151 (211)
T ss_dssp             EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTT--CCTTTBCCCEECCCCTTCCCS
T ss_pred             CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcC--ccccccchhhhcCCCCCHHHH
Confidence            4578999999999999999999999976656566655  235666  332222   346689999987

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.30  E-value=1.2e-12  Score=115.28  Aligned_cols=66  Identities=15%  Similarity=0.157  Sum_probs=53.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccc-----eEEec---CCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-----QIFAG---DVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~-----~iv~s---~~~~~~KP~p~~f  240 (241)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|...     .++++   .++...||+|++|
T Consensus       255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~  328 (415)
T 3p96_A          255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATAL  328 (415)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHH
T ss_pred             CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHH
Confidence            689999999999999999999999999999999999999998777521     12322   2455678877654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.29  E-value=5.4e-11  Score=103.61  Aligned_cols=66  Identities=17%  Similarity=0.077  Sum_probs=58.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCC-----------CCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP-----------RKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~-----------~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+.+.++++++++           ..||+|++|
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~  290 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY  290 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHH
Confidence            478999999999999999999999999999999999999999999722478888764           489999876

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.23  E-value=8.5e-12  Score=96.84  Aligned_cols=62  Identities=16%  Similarity=0.195  Sum_probs=51.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCcccceEE-----ecCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQIF-----AGDVVPRKK  234 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---------------~~~~~~l~~l~~~~~f~~~~iv-----~s~~~~~~K  234 (241)
                      .+++||+.++|+.|+++|++++|+||+..               ..+...++.+|  .+|+  .++     .+++++..|
T Consensus        26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~--~~~~~~~~~~~~~~~~K  101 (179)
T 3l8h_A           26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVD--AIFMCPHGPDDGCACRK  101 (179)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCC--EEEEECCCTTSCCSSST
T ss_pred             ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--Ccee--EEEEcCCCCCCCCCCCC
Confidence            57899999999999999999999999986               66778888886  4555  344     357888999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       102 P~~~~~  107 (179)
T 3l8h_A          102 PLPGMY  107 (179)
T ss_dssp             TSSHHH
T ss_pred             CCHHHH
Confidence            999876

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.21  E-value=2.7e-11  Score=96.93  Aligned_cols=62  Identities=15%  Similarity=0.155  Sum_probs=51.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---------------HHHHHHHHHHhcCCCCcccceEEe------------c
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFA------------G  227 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---------------~~~~~~~l~~l~~~~~f~~~~iv~------------s  227 (241)
                      .+++||+.++|++|+++|++++|+||+.               ...+...++.+|+.  |+  .++.            +
T Consensus        49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~--~~~~~~~~~~~~~~~~~  124 (211)
T 2gmw_A           49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LD--GIYYCPHHPQGSVEEFR  124 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CS--EEEEECCBTTCSSGGGB
T ss_pred             CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eE--EEEECCcCCCCcccccC
Confidence            5789999999999999999999999998               47888899998875  65  4443            3


Q ss_pred             CCCCCCCCCCCCC
Q 026252          228 DVVPRKKPDPLCC  240 (241)
Q Consensus       228 ~~~~~~KP~p~~f  240 (241)
                      ++++..||+|++|
T Consensus       125 ~~~~~~KP~p~~~  137 (211)
T 2gmw_A          125 QVCDCRKPHPGML  137 (211)
T ss_dssp             SCCSSSTTSCHHH
T ss_pred             ccCcCCCCCHHHH
Confidence            4577899999875

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.18  E-value=3e-11  Score=106.53  Aligned_cols=60  Identities=20%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCc------------HHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSN------------EKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~------------~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++||+.++|+.|+++|++++|+||..            ...+..+++.+|+.  |+  .+++++++...||+|++|
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd--~i~~~~~~~~~KP~p~~~  159 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMW  159 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSTTSTTSSHHH
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EE--EEEECCCCCCCCCCHHHH
Confidence            78999999999999999999999965            23377888888773  77  789999999999999876

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.17  E-value=9.7e-12  Score=97.27  Aligned_cols=52  Identities=25%  Similarity=0.249  Sum_probs=43.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV  229 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~  229 (241)
                      ..++||+.++|+.|+++|++++++||+....++.. +.+|+..+++  .++..++
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~--~~~~~~~  129 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMAN--RAIFEDG  129 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEE--EEEEETT
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhhee--eEEeeCC
Confidence            68999999999999999999999999988888888 8888776654  4444443

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.16  E-value=5.9e-12  Score=105.50  Aligned_cols=46  Identities=17%  Similarity=0.112  Sum_probs=43.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .+++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|+
T Consensus       162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~  207 (287)
T 3a1c_A          162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIA  207 (287)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEEC
T ss_pred             cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeee
Confidence            5799999999999999999999999999999999999999888886

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.12  E-value=1.3e-10  Score=95.96  Aligned_cols=59  Identities=15%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCC--CCcccceEEecCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGP--ERAEKIQIFAGDVVPRKKPDP  237 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~--~~f~~~~iv~s~~~~~~KP~p  237 (241)
                      .+++||+.++|+.|+++|++++|+||..   ...+...|+.+|+.  .+|+  .++++++.  .||.+
T Consensus       100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~--vi~~~~~~--~K~~~  163 (258)
T 2i33_A          100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEH--ILLQDPKE--KGKEK  163 (258)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTT--EEEECTTC--CSSHH
T ss_pred             CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCce--EEECCCCC--CCcHH
Confidence            6789999999999999999999999997   66778888888887  6666  55655542  45543

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.06  E-value=5.4e-13  Score=107.80  Aligned_cols=145  Identities=15%  Similarity=0.107  Sum_probs=83.5

Q ss_pred             CCcEEEEecCcccccCccchHHHH--HHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRIS--FNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      ++|+|+||+||||+|+... +..+  +.+.+++.|........      ..|.....+...+...++...   .......
T Consensus         2 ~~k~i~fDlDGTLl~~~~~-~~~~~~~~~~l~~~g~~~~~~t~------~~g~~~~~~~~~~~~~g~~~~---~~~~~~~   71 (250)
T 2c4n_A            2 TIKNVICDIDGVLMHDNVA-VPGAAEFLHGIMDKGLPLVLLTN------YPSQTGQDLANRFATAGVDVP---DSVFYTS   71 (250)
T ss_dssp             CCCEEEEECBTTTEETTEE-CTTHHHHHHHHHHTTCCEEEEES------CCSCCHHHHHHHHHHTTCCCC---GGGEEEH
T ss_pred             CccEEEEcCcceEEeCCEe-CcCHHHHHHHHHHcCCcEEEEEC------CCCCCHHHHHHHHHHcCCCCC---HHHeEcH
Confidence            5899999999999999875 4444  44556666765421000      024445555555555444211   0100000


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEE---------------------------------EEeC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVA---------------------------------VCST  200 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~---------------------------------ivTn  200 (241)
                        ....    ..+.+.. .....++||+.++++.|++.|++++                                 ++||
T Consensus        72 --~~~~----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~  144 (250)
T 2c4n_A           72 --AMAT----ADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN  144 (250)
T ss_dssp             --HHHH----HHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESC
T ss_pred             --HHHH----HHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence              0000    1111111 1235678999999999999999999                                 9998


Q ss_pred             CcHHHHHHHHHHhc-CCCCcccceEEecCCCCCCCCCCCCC
Q 026252          201 SNEKAVTAIVSFLL-GPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       201 ~~~~~~~~~l~~l~-~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      .. ......++.++ +..+|+  .+++.+.+...||+|++|
T Consensus       145 ~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~kpk~~~~  182 (250)
T 2c4n_A          145 PD-THGRGFYPACGALCAGIE--KISGRKPFYVGKPSPWII  182 (250)
T ss_dssp             CC-SBSSTTCBCHHHHHHHHH--HHHCCCCEECSTTSTHHH
T ss_pred             CC-CCCCCeeecchHHHHHHH--HHhCCCceEeCCCCHHHH
Confidence            76 33333333333 334454  455666678889988754

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.03  E-value=5.6e-10  Score=87.79  Aligned_cols=46  Identities=24%  Similarity=0.140  Sum_probs=40.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      ..++||+.++|+.|+++|++++++||.....+...++.+++..+|.
T Consensus        75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~  120 (211)
T 1l7m_A           75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA  120 (211)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEE
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEE
Confidence            5678999999999999999999999998888888889888776665

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.02  E-value=6.6e-12  Score=103.42  Aligned_cols=62  Identities=11%  Similarity=-0.067  Sum_probs=45.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHH--HHH-HHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA--VTA-IVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~--~~~-~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+ +|+++ |+||.+...  ... +++..++..+|+  .++++++++..||+|++|
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~  189 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVE--TATQTKPVYIGKPKAIIM  189 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHTCCCEECSTTSHHHH
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHH--HHhCCCccccCCCCHHHH
Confidence            468999999999997 89998 999987532  111 122223456677  678888888999999876

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.01  E-value=5.8e-11  Score=101.54  Aligned_cols=66  Identities=18%  Similarity=0.068  Sum_probs=53.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccce-----EE---ecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQ-----IF---AGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~-----iv---~s~~~~~~KP~p~~f  240 (241)
                      .+++||+.++|+.|+++|++++++||+....++.+++.+|+..+|+...     .+   .++++...||+|++|
T Consensus       177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~  250 (335)
T 3n28_A          177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADIL  250 (335)
T ss_dssp             CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHH
T ss_pred             CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHH
Confidence            6899999999999999999999999999999999999999987776311     11   223556678877654

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=98.93  E-value=6.5e-12  Score=102.72  Aligned_cols=63  Identities=8%  Similarity=-0.103  Sum_probs=46.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccc-eEEecCCCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKI-QIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~-~iv~s~~~~~~KP~p~~f  240 (241)
                      .++||+.++++.|+ +|+++ ++||.........+..+++..+|+.. .++++++++..||+|++|
T Consensus       122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~  185 (259)
T 2ho4_A          122 FHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFF  185 (259)
T ss_dssp             CBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHH
T ss_pred             CCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHH
Confidence            37899999999999 89999 99998765555555555666666411 346677788899998765

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.93  E-value=6.2e-10  Score=87.12  Aligned_cols=50  Identities=14%  Similarity=0.100  Sum_probs=45.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc-HHHHHHHHHHhcCCCCcccceEEe
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN-EKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~-~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      ..++||+.++|+.|+++|++++|+||+. ...++.+++.+|+..+|+  .++.
T Consensus        67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~--~~~~  117 (187)
T 2wm8_A           67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV--HREI  117 (187)
T ss_dssp             ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE--EEEE
T ss_pred             cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc--eeEE
Confidence            5789999999999999999999999998 799999999999999998  4533

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.85  E-value=2e-10  Score=87.69  Aligned_cols=44  Identities=16%  Similarity=-0.007  Sum_probs=38.8

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +.|++.++|+.|+++|++++++||+....++..++.+|+..+|+
T Consensus        37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~   80 (162)
T 2p9j_A           37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYT   80 (162)
T ss_dssp             EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEE
T ss_pred             ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhcc
Confidence            34667899999999999999999999999999999998776665

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.82  E-value=4.5e-09  Score=81.61  Aligned_cols=62  Identities=16%  Similarity=0.211  Sum_probs=54.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC---------------cHHHHHHHHHHhcCCCCcccceEEec-----CCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS---------------NEKAVTAIVSFLLGPERAEKIQIFAG-----DVVPRKK  234 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~---------------~~~~~~~~l~~l~~~~~f~~~~iv~s-----~~~~~~K  234 (241)
                      ..++||+.++|+.|+++|++++|+||+               ....+..+++.+|+.  |+  .++.+     ++++..|
T Consensus        41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd--~v~~s~~~~~~~~~~~K  116 (176)
T 2fpr_A           41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FD--EVLICPHLPADECDCRK  116 (176)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EE--EEEEECCCGGGCCSSST
T ss_pred             CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--ee--EEEEcCCCCcccccccC
Confidence            578999999999999999999999999               678889999999875  76  56544     7889999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       117 P~p~~~  122 (176)
T 2fpr_A          117 PKVKLV  122 (176)
T ss_dssp             TSCGGG
T ss_pred             CCHHHH
Confidence            999987

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.81  E-value=6.6e-11  Score=90.58  Aligned_cols=37  Identities=19%  Similarity=0.029  Sum_probs=34.2

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +|+.|+++|++++++||.....++..++.+|+..+|+
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~   75 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQ   75 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEEC
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeec
Confidence            7899999999999999999999999999998877776

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.78  E-value=6.9e-10  Score=81.65  Aligned_cols=62  Identities=15%  Similarity=0.119  Sum_probs=56.6

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++||+.++|+.|+++|++++++||+....++..++.+++..+|+  .++++++++..||+|++|
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~Kp~~~~~   80 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD--KVLLSGELGVEKPEEAAF   80 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSS--EEEEHHHHSCCTTSHHHH
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhcc--EEEEeccCCCCCCCHHHH
Confidence            35899999999999999999999999888899999999989998  789999989999999765

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.77  E-value=6.6e-11  Score=94.95  Aligned_cols=37  Identities=14%  Similarity=0.031  Sum_probs=34.7

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +|+.|+++|++++|+||.....++.+++.+|+..+|+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~  120 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQ  120 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEEC
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhc
Confidence            8899999999999999999999999999999887776

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.75  E-value=9.6e-11  Score=91.18  Aligned_cols=36  Identities=22%  Similarity=0.153  Sum_probs=32.7

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +|+.|+++|++++|+||.....++.+++.+|+. +|.
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~~   82 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VLH   82 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EEE
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eEe
Confidence            889999999999999999999999999999876 543

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.71  E-value=2.1e-10  Score=90.20  Aligned_cols=37  Identities=19%  Similarity=0.053  Sum_probs=34.9

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +|+.|+++|++++|+||.....++.+++.+|+.++|+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~   90 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQ   90 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEEC
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhc
Confidence            8899999999999999999999999999999888886

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=98.14  E-value=2.1e-09  Score=88.93  Aligned_cols=46  Identities=20%  Similarity=0.230  Sum_probs=43.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .+++||+.++|+.|+++|++++++||.....++.+++.+|+.++|+
T Consensus       135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~  180 (263)
T 2yj3_A          135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYS  180 (263)
Confidence            4789999999999999999999999999999999999999988887

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=98.62  E-value=4.6e-10  Score=92.56  Aligned_cols=62  Identities=6%  Similarity=-0.144  Sum_probs=46.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHH--HHHHHH-hcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV--TAIVSF-LLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~--~~~l~~-l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++++.|+ +|+++ ++||.+....  ...+.. .++..+|+  .+++++++..+||+|++|
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~--~~~~~~~~~~~KP~~~~~  193 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALK--VATNVEPIIIGKPNEPMY  193 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHH--HHHCCCCEECSTTSHHHH
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHH--HHhCCCccEecCCCHHHH
Confidence            467899999999999 89998 9999976433  222222 33445677  678888888999999876

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.62  E-value=6.1e-10  Score=92.70  Aligned_cols=59  Identities=12%  Similarity=0.147  Sum_probs=45.9

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHH--H--HHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAV--T--AIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~--~--~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      +...++++.|+++|++ +|+||.+....  .  .+++..++..+|+  .++++++++..||+|++|
T Consensus       148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~--~~~~~~~~~~~KP~p~~~  210 (284)
T 2hx1_A          148 HDLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIE--SILGRRFIRFGKPDSQMF  210 (284)
T ss_dssp             HHHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHH--HHHCSCEEEESTTSSHHH
T ss_pred             ccHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHH--HHhCCceeEecCCCHHHH
Confidence            3677777899999999 99999976544  2  2234556667888  788888889999999876

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=98.61  E-value=1e-09  Score=90.38  Aligned_cols=62  Identities=13%  Similarity=0.009  Sum_probs=42.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH---HHHHhcCCCCcccceEEecCC-CCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA---IVSFLLGPERAEKIQIFAGDV-VPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~---~l~~l~~~~~f~~~~iv~s~~-~~~~KP~p~~f  240 (241)
                      ..++||+.++++.| +.|+++ ++||........   .++..++..+|+  .++++++ ++..||+|++|
T Consensus       136 ~~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~kpk~~~~  201 (271)
T 1vjr_A          136 TLTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIE--ASTGRKPDLIAGKPNPLVV  201 (271)
T ss_dssp             TCCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHH--HHHSCCCSEECSTTSTHHH
T ss_pred             CcCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHH--HHhCCCCcccCCCCCHHHH
Confidence            35689999999999 789998 999986432211   122223445666  5667777 88999998765

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.58  E-value=4.1e-09  Score=83.39  Aligned_cols=37  Identities=11%  Similarity=0.099  Sum_probs=33.6

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .|+.|+++|++++|+||+....++.+++.+|+..+|+
T Consensus        60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~   96 (195)
T 3n07_A           60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQ   96 (195)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEEC
T ss_pred             HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEee
Confidence            4789999999999999999999999999998877665

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.55  E-value=8.7e-09  Score=81.10  Aligned_cols=37  Identities=16%  Similarity=0.147  Sum_probs=33.9

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .|+.|+++|++++|+||+....+...++.+|+..+|+
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~   90 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYK   90 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEEC
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcccee
Confidence            4789999999999999999999999999999887776

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.53  E-value=2.8e-07  Score=75.86  Aligned_cols=52  Identities=12%  Similarity=0.035  Sum_probs=43.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH----HHHHHHHHHhcCCCCcccceEEec
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE----KAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~----~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                      .+++||+.++|+.|+++|+++++|||...    ..+...|+.+|+..+++. .++..
T Consensus       100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-~Lilr  155 (262)
T 3ocu_A          100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEES-AFYLK  155 (262)
T ss_dssp             CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGG-GEEEE
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccccc-ceecc
Confidence            68999999999999999999999999854    588899999988766632 24443

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=98.53  E-value=2.9e-08  Score=82.68  Aligned_cols=45  Identities=18%  Similarity=0.054  Sum_probs=37.2

Q ss_pred             CCChhHHHHHHHHHHC-CCeEEEEeCC---------------------cHHHHHHHHHHhcCCCCcc
Q 026252          176 PLRPGVAKLIDQALEK-GVKVAVCSTS---------------------NEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~-gi~v~ivTn~---------------------~~~~~~~~l~~l~~~~~f~  220 (241)
                      ..++++.++++.|+++ |+++++.|+.                     ....+...++.+|+..+|.
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~  188 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNIN  188 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEE
Confidence            5679999999999998 9999999987                     5667777888887766664

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.49  E-value=4.7e-07  Score=74.39  Aligned_cols=46  Identities=11%  Similarity=0.044  Sum_probs=40.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH----HHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE----KAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~----~~~~~~l~~l~~~~~f~  220 (241)
                      .+++||+.++|+.|+++|++++++||...    ..+...|+.+|+..+++
T Consensus       100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~  149 (260)
T 3pct_A          100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND  149 (260)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST
T ss_pred             CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc
Confidence            68999999999999999999999999954    58899999998876663

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=98.49  E-value=3.1e-07  Score=75.33  Aligned_cols=48  Identities=13%  Similarity=0.108  Sum_probs=36.8

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHhcCCCCcccceEEec
Q 026252          178 RPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       178 ~pgv~elL~~Lk~~gi~v~ivTn---~~~~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                      .|++.+.|++|+++|++++++||   .....+...++.+|+....+  .++++
T Consensus        26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~--~ii~~   76 (268)
T 3qgm_A           26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGED--EILVA   76 (268)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGG--GEEEH
T ss_pred             CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHH--HeeCH
Confidence            37788999999999999999999   46666777788887654444  45543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.48  E-value=4.5e-08  Score=76.05  Aligned_cols=43  Identities=14%  Similarity=-0.057  Sum_probs=37.2

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          178 RPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       178 ~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .++..++|+.|+++|++++++||.....+..+++.+++..+|+
T Consensus        37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~   79 (180)
T 1k1e_A           37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFL   79 (180)
T ss_dssp             EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEE
T ss_pred             ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeec
Confidence            3455589999999999999999999999999999998876664

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.39  E-value=1.2e-08  Score=85.90  Aligned_cols=63  Identities=8%  Similarity=-0.068  Sum_probs=46.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHH--H-HHHHHhc-CCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAV--T-AIVSFLL-GPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~--~-~~l~~l~-~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++++.|+++|+ ++++||.+....  . ..+..+| +..+|+  .++++++++..||+|++|
T Consensus       155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~--~~~~~~~~~~~KP~~~~~  221 (306)
T 2oyc_A          155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVE--TASGRQALVVGKPSPYMF  221 (306)
T ss_dssp             TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHH--HHHTCCCEECSTTSTHHH
T ss_pred             CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHH--HHhCCCceeeCCCCHHHH
Confidence            3568999999999999999 999999975433  1 2233333 445676  677788888999999765

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.38  E-value=2.1e-07  Score=72.77  Aligned_cols=37  Identities=22%  Similarity=0.100  Sum_probs=33.2

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      +|+.|+++|++++|+||.....++.+++.+|+..+|+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~   97 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQ   97 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEEC
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeec
Confidence            7889999999999999999999999999998776654

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=98.34  E-value=5.9e-09  Score=85.15  Aligned_cols=19  Identities=32%  Similarity=0.392  Sum_probs=16.5

Q ss_pred             CCCCcEEEEecCcccccCc
Q 026252           74 SVLPSALLFDCDGVLVDTE   92 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~   92 (241)
                      |+++|+|+||+||||++++
T Consensus         9 m~~~k~i~fDlDGTLl~s~   27 (271)
T 2x4d_A            9 LAGVRGVLLDISGVLYDSG   27 (271)
T ss_dssp             TTTCCEEEECCBTTTEECC
T ss_pred             HhcCCEEEEeCCCeEEecC
Confidence            3568999999999999964

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.33  E-value=3.9e-07  Score=72.75  Aligned_cols=62  Identities=21%  Similarity=0.234  Sum_probs=51.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH---------------HHHHHHHHHhcCCCCcccceE-Eec-----------
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE---------------KAVTAIVSFLLGPERAEKIQI-FAG-----------  227 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~---------------~~~~~~l~~l~~~~~f~~~~i-v~s-----------  227 (241)
                      .+++||+.++|+.|+++|++++++||+..               ..+...++.+|+.  |+  .+ ++.           
T Consensus        55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~--~~~~~~~~~~g~~~~~~  130 (218)
T 2o2x_A           55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VD--MVLACAYHEAGVGPLAI  130 (218)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CS--EEEEECCCTTCCSTTCC
T ss_pred             CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--ee--eEEEeecCCCCceeecc
Confidence            57899999999999999999999999987               6888899988764  54  33 333           


Q ss_pred             CCCCCCCCCCCCC
Q 026252          228 DVVPRKKPDPLCC  240 (241)
Q Consensus       228 ~~~~~~KP~p~~f  240 (241)
                      +++...||+|++|
T Consensus       131 ~~~~~~KP~~~~~  143 (218)
T 2o2x_A          131 PDHPMRKPNPGML  143 (218)
T ss_dssp             SSCTTSTTSCHHH
T ss_pred             cCCccCCCCHHHH
Confidence            6678899999875

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=98.33  E-value=2e-05  Score=68.47  Aligned_cols=51  Identities=14%  Similarity=0.100  Sum_probs=41.7

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEe
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      +++||+.|+++.|+++|++++|||++....++.+.+.+|.....+.+.|++
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig  271 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLG  271 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEE
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEE
Confidence            479999999999999999999999999999999999886543333224444

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.29  E-value=9.3e-07  Score=72.43  Aligned_cols=40  Identities=13%  Similarity=0.168  Sum_probs=31.1

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHhcCCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGPER  218 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn---~~~~~~~~~l~~l~~~~~  218 (241)
                      |++.+.|++|+++|++++++||   .....+...++.+|+...
T Consensus        25 ~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~   67 (266)
T 3pdw_A           25 EEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT   67 (266)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred             ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence            5667889999999999999999   455666777777776433

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.25  E-value=7.7e-06  Score=69.55  Aligned_cols=39  Identities=23%  Similarity=0.323  Sum_probs=36.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL  213 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l  213 (241)
                      +.++|++.++++.|+++|+.++|||.+....++.+.+.+
T Consensus       142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~  180 (327)
T 4as2_A          142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP  180 (327)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence            368999999999999999999999999999999998865

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=98.19  E-value=3.2e-06  Score=69.26  Aligned_cols=46  Identities=17%  Similarity=0.325  Sum_probs=33.5

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHHhcCCCCcccceEEe
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~---~~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      |++.+.|++|+++|++++++||+   ....+...++.+|+....+  .+++
T Consensus        24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~--~ii~   72 (264)
T 3epr_A           24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLE--TIYT   72 (264)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGG--GEEE
T ss_pred             cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh--heec
Confidence            67788999999999999999964   5556667777776654333  4444

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.15  E-value=1.3e-05  Score=59.85  Aligned_cols=39  Identities=5%  Similarity=-0.106  Sum_probs=29.7

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHhcC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLG  215 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~---~~~~~~l~~l~~  215 (241)
                      +.|++.++|++|+++|+.++++|+...   ..+...++.+|+
T Consensus        25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi   66 (142)
T 2obb_A           25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL   66 (142)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence            347899999999999999999999863   344444555554

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=98.14  E-value=2.8e-06  Score=72.21  Aligned_cols=40  Identities=20%  Similarity=0.104  Sum_probs=33.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      ..+.+++.++|+.|++ |++++++|+.....+....+.+++
T Consensus       102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~  141 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV  141 (332)
T ss_dssp             CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence            3678999999999999 999999999886667766666544

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.14  E-value=6.5e-06  Score=67.72  Aligned_cols=39  Identities=15%  Similarity=0.233  Sum_probs=32.8

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.+.+.|++|+++|++++++|+.....+..+++.+++..
T Consensus        25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   63 (279)
T 3mpo_A           25 QATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG   63 (279)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence            444577888999999999999999999999999887654

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.12  E-value=8.8e-06  Score=66.92  Aligned_cols=37  Identities=11%  Similarity=0.148  Sum_probs=32.2

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      +.+.+.|++|+++|+.++++|+.....+..+++.+++
T Consensus        25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~   61 (279)
T 4dw8_A           25 SRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRM   61 (279)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTG
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCC
Confidence            5556888899999999999999998889999888865

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=98.04  E-value=4.5e-05  Score=63.65  Aligned_cols=47  Identities=11%  Similarity=0.135  Sum_probs=42.1

Q ss_pred             HhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          171 EKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       171 ~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      .....++.||+.++++.|+++|+++.++|++....++.+++.+|...
T Consensus       136 ~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~  182 (297)
T 4fe3_A          136 ADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH  182 (297)
T ss_dssp             HTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCC
T ss_pred             HhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCc
Confidence            33457999999999999999999999999999999999999997653

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.97  E-value=1.5e-05  Score=68.45  Aligned_cols=50  Identities=16%  Similarity=0.108  Sum_probs=37.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHH-HhcCCCCcccceEEecC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVS-FLLGPERAEKIQIFAGD  228 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~-~l~~~~~f~~~~iv~s~  228 (241)
                      +.||+.++|+.|+++|+++.++||+.   .......|. .+|+.-..+  .|++|.
T Consensus        30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~--~i~ts~   83 (352)
T 3kc2_A           30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPL--QIIQSH   83 (352)
T ss_dssp             ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGG--GEECTT
T ss_pred             eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChh--hEeehH
Confidence            45899999999999999999999984   334444444 687754444  677765

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=97.96  E-value=2.6e-06  Score=71.25  Aligned_cols=61  Identities=13%  Similarity=0.004  Sum_probs=47.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHH---HHHHHHH--------hcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKA---VTAIVSF--------LLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~---~~~~l~~--------l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||.....   +...|+.        +|+  +|+  .++++++. ..||+|++|
T Consensus       187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~--~~~~~~~~-~~kp~p~~~  258 (301)
T 1ltq_A          187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLV--MQCQREQG-DTRKDDVVK  258 (301)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCS--EEEECCTT-CCSCHHHHH
T ss_pred             cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cch--heeeccCC-CCcHHHHHH
Confidence            3569999999999999999999999997443   4566777        777  476  67777664 578998754

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=97.94  E-value=2.6e-05  Score=62.64  Aligned_cols=33  Identities=12%  Similarity=0.137  Sum_probs=22.8

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      +.|++|+++|++++++|+.....+..+++.+++
T Consensus        27 ~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~   59 (231)
T 1wr8_A           27 EAIRRAESLGIPIMLVTGNTVQFAEAASILIGT   59 (231)
T ss_dssp             HHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCC
Confidence            555666777777777777776666666666654

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=97.92  E-value=1.4e-05  Score=66.13  Aligned_cols=107  Identities=9%  Similarity=0.019  Sum_probs=54.2

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhh---cCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK---ELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEE  150 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (241)
                      +|++|+|+||+||||+++... +...+.++++++   |..+..         ..|.........+...+++.........
T Consensus         3 ~M~~kli~fDlDGTLl~~~~~-i~~~~~~al~~l~~~G~~~~i---------aTGR~~~~~~~~~~~~~~~~~~i~~nGa   72 (290)
T 3dnp_A            3 AMSKQLLALNIDGALLRSNGK-IHQATKDAIEYVKKKGIYVTL---------VTNRHFRSAQKIAKSLKLDAKLITHSGA   72 (290)
T ss_dssp             ---CCEEEECCCCCCSCTTSC-CCHHHHHHHHHHHHTTCEEEE---------BCSSCHHHHHHHHHHTTCCSCEEEGGGT
T ss_pred             CCcceEEEEcCCCCCCCCCCc-cCHHHHHHHHHHHHCCCEEEE---------ECCCChHHHHHHHHHcCCCCeEEEcCCe
Confidence            356899999999999999875 555666666554   322110         0123333333333333322000000000


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCC
Q 026252          151 RKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTS  201 (241)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~  201 (241)
                         .+.....       +.+. ...-..+++.++++.+++.|+.+.+.|+.
T Consensus        73 ---~i~~~~~-------~~~~-~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  112 (290)
T 3dnp_A           73 ---YIAEKID-------APFF-EKRISDDHTFNIVQVLESYQCNIRLLHEK  112 (290)
T ss_dssp             ---EEESSTT-------SCSE-ECCCCHHHHHHHHHHHHTSSCEEEEECSS
T ss_pred             ---EEEcCCC-------CEEE-ecCCCHHHHHHHHHHHHHcCceEEEEECC
Confidence               0000000       0000 11234578899999999999999988875

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.82  E-value=3.6e-05  Score=56.10  Aligned_cols=28  Identities=14%  Similarity=0.214  Sum_probs=23.5

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcH
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNE  203 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~  203 (241)
                      .+.+++.++|++|+++|++++++||...
T Consensus        24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~   51 (126)
T 1xpj_A           24 LPRLDVIEQLREYHQLGFEIVISTARNM   51 (126)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred             CCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence            4557888999999999999999999864

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=97.79  E-value=3.7e-05  Score=63.59  Aligned_cols=20  Identities=25%  Similarity=0.293  Sum_probs=16.9

Q ss_pred             CCCCcEEEEecCcccccCcc
Q 026252           74 SVLPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~   93 (241)
                      .+++|+|+||+||||+++..
T Consensus        18 ~~~~kli~~DlDGTLl~~~~   37 (283)
T 3dao_A           18 QGMIKLIATDIDGTLVKDGS   37 (283)
T ss_dssp             -CCCCEEEECCBTTTBSTTC
T ss_pred             ccCceEEEEeCcCCCCCCCC
Confidence            36789999999999998764

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=97.79  E-value=4e-05  Score=61.54  Aligned_cols=37  Identities=27%  Similarity=0.180  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       181 v~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.+.|++|+++|++++++|+.....+..+++.+++..
T Consensus        27 ~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~   63 (227)
T 1l6r_A           27 AIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   63 (227)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence            4477889999999999999999999999999887643

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=97.76  E-value=8e-05  Score=61.61  Aligned_cols=35  Identities=20%  Similarity=0.175  Sum_probs=29.8

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.|++|+++|++++++|+.....+..+++.+++..
T Consensus        29 ~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~   63 (282)
T 1rkq_A           29 NAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ   63 (282)
T ss_dssp             HHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred             HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence            67788899999999999998888888888886643

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=97.71  E-value=5.4e-05  Score=62.61  Aligned_cols=19  Identities=21%  Similarity=0.329  Sum_probs=15.6

Q ss_pred             CCCcEEEEecCcccccCcc
Q 026252           75 VLPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~   93 (241)
                      +++|+|+||+||||+++..
T Consensus        19 ~~~kli~~DlDGTLl~~~~   37 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDH   37 (285)
T ss_dssp             --CCEEEEECCCCCSCTTS
T ss_pred             CcceEEEEeCcCCCCCCCC
Confidence            5689999999999998765

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=97.68  E-value=0.00012  Score=61.36  Aligned_cols=38  Identities=21%  Similarity=0.310  Sum_probs=31.4

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH--HHhc-CC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV--SFLL-GP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l--~~l~-~~  216 (241)
                      +.+.+.|++|+++|++++++|+.....+..++  +.++ +.
T Consensus        48 ~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~   88 (301)
T 2b30_A           48 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN   88 (301)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence            44557788889999999999999988888888  8776 54

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=97.66  E-value=0.0001  Score=61.03  Aligned_cols=19  Identities=21%  Similarity=0.433  Sum_probs=16.0

Q ss_pred             CCcEEEEecCcccccCccc
Q 026252           76 LPSALLFDCDGVLVDTEKD   94 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~   94 (241)
                      |+|+|+||+||||++++..
T Consensus         3 mikli~~DlDGTLl~~~~~   21 (288)
T 1nrw_A            3 AMKLIAIDLDGTLLNSKHQ   21 (288)
T ss_dssp             -CCEEEEECCCCCSCTTSC
T ss_pred             ceEEEEEeCCCCCCCCCCc
Confidence            4799999999999997753

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=97.61  E-value=1.2e-05  Score=69.45  Aligned_cols=55  Identities=9%  Similarity=0.236  Sum_probs=46.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC-CcccceEEecCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVVP  231 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~-~f~~~~iv~s~~~~  231 (241)
                      +.++||+.++|+++. +++.++|.|++....+..+++.++... +|.. .+++.++.+
T Consensus        74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~-ri~sr~~~g  129 (372)
T 3ef0_A           74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRDDSG  129 (372)
T ss_dssp             EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSS-CEECTTTSS
T ss_pred             EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeee-EEEEecCCC
Confidence            678999999999998 679999999999999999999998776 6753 466555543

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=97.60  E-value=0.00014  Score=59.05  Aligned_cols=29  Identities=21%  Similarity=0.156  Sum_probs=22.7

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHH
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVT  207 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~  207 (241)
                      +.+.++|++|+++|++++++|+.....+.
T Consensus        24 ~~~~~~l~~l~~~g~~~~iaTGR~~~~~~   52 (246)
T 3f9r_A           24 DEMRALIKRARGAGFCVGTVGGSDFAKQV   52 (246)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence            34446688999999999999999866443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.58  E-value=5.7e-05  Score=59.39  Aligned_cols=57  Identities=11%  Similarity=0.064  Sum_probs=50.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ..++||+.++|++|++. ++++|+|++.+..++.+++.++...+|+  .+++.+++...|
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~--~~l~rd~~~~~k  123 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFR--ARLFRESCVFHR  123 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEE--EEECGGGCEEET
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEE--EEEEcccceecC
Confidence            46789999999999998 9999999999999999999999999998  788887765444

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=97.53  E-value=0.00019  Score=59.12  Aligned_cols=36  Identities=19%  Similarity=0.186  Sum_probs=31.1

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      .+.|++|+++|++++++|+.....+..+++.+++..
T Consensus        32 ~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~   67 (275)
T 1xvi_A           32 APWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   67 (275)
T ss_dssp             HHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence            477888999999999999999999999999887643

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.43  E-value=0.00012  Score=56.81  Aligned_cols=54  Identities=13%  Similarity=0.086  Sum_probs=48.6

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVP  231 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~  231 (241)
                      ..++||+.++|++|++. +.++|+|++.+..++.+++.++...+|+  .+++.++..
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~--~~~~rd~~~  107 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFR--ARLFRESCV  107 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEE--EEECGGGSE
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEE--EEEeccCce
Confidence            46789999999999998 9999999999999999999999988888  677777654

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=97.38  E-value=7.3e-05  Score=61.00  Aligned_cols=33  Identities=24%  Similarity=0.175  Sum_probs=24.7

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhh
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEK  107 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~  107 (241)
                      |.|+|+|+||+||||+|+... +...+.++++++
T Consensus         2 M~M~kli~fDlDGTLl~~~~~-i~~~~~~al~~l   34 (274)
T 3fzq_A            2 MKLYKLLILDIDGTLRDEVYG-IPESAKHAIRLC   34 (274)
T ss_dssp             --CCCEEEECSBTTTBBTTTB-CCHHHHHHHHHH
T ss_pred             CCcceEEEEECCCCCCCCCCc-CCHHHHHHHHHH
Confidence            346899999999999999875 445666666554

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=97.31  E-value=0.00011  Score=59.87  Aligned_cols=16  Identities=56%  Similarity=0.829  Sum_probs=14.6

Q ss_pred             cEEEEecCcccccCcc
Q 026252           78 SALLFDCDGVLVDTEK   93 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~   93 (241)
                      |+|+||+||||++++.
T Consensus         3 kli~~DlDGTLl~~~~   18 (261)
T 2rbk_A            3 KALFFDIDGTLVSFET   18 (261)
T ss_dssp             CEEEECSBTTTBCTTT
T ss_pred             cEEEEeCCCCCcCCCC
Confidence            9999999999998765

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=97.29  E-value=0.00069  Score=55.41  Aligned_cols=18  Identities=28%  Similarity=0.587  Sum_probs=15.2

Q ss_pred             CCcEEEEecCcccccCcc
Q 026252           76 LPSALLFDCDGVLVDTEK   93 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~   93 (241)
                      |+|+|+||+||||++...
T Consensus         1 mikli~~DlDGTLl~~~~   18 (268)
T 1nf2_A            1 MYRVFVFDLDGTLLNDNL   18 (268)
T ss_dssp             CBCEEEEECCCCCSCTTS
T ss_pred             CccEEEEeCCCcCCCCCC
Confidence            379999999999998653

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=97.26  E-value=3.4e-05  Score=59.23  Aligned_cols=30  Identities=20%  Similarity=0.112  Sum_probs=24.6

Q ss_pred             HHHHHHHCCCeEEEEeCCcHHHHHHHHH--HhcC
Q 026252          184 LIDQALEKGVKVAVCSTSNEKAVTAIVS--FLLG  215 (241)
Q Consensus       184 lL~~Lk~~gi~v~ivTn~~~~~~~~~l~--~l~~  215 (241)
                      .|+.|+++|++++|+||.  ..++.+++  .+++
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi   75 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDC   75 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCC
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCc
Confidence            578899999999999999  67788888  4544

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=97.17  E-value=0.00065  Score=54.99  Aligned_cols=34  Identities=12%  Similarity=0.086  Sum_probs=29.0

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      +.|++|+++|++++++|+.....+..+++.+++.
T Consensus        24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~   57 (249)
T 2zos_A           24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE   57 (249)
T ss_dssp             HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence            5667788999999999999988888888888654

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=97.13  E-value=0.00019  Score=59.93  Aligned_cols=32  Identities=16%  Similarity=0.296  Sum_probs=24.0

Q ss_pred             CCCcEEEEecCcccccCccchHHHH-HHHHHHhh
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRIS-FNDTFKEK  107 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a-~~~~~~~~  107 (241)
                      |++|+|+||+||||+|+... +... +.++++++
T Consensus        35 M~iKli~fDlDGTLld~~~~-i~~~~~~~al~~l   67 (304)
T 3l7y_A           35 MSVKVIATDMDGTFLNSKGS-YDHNRFQRILKQL   67 (304)
T ss_dssp             -CCSEEEECCCCCCSCTTSC-CCHHHHHHHHHHH
T ss_pred             eeeEEEEEeCCCCCCCCCCc-cCHHHHHHHHHHH
Confidence            57999999999999999875 3334 66666554

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.09  E-value=0.00031  Score=57.20  Aligned_cols=32  Identities=28%  Similarity=0.357  Sum_probs=23.1

Q ss_pred             CCCcEEEEecCccccc-CccchHHHHHHHHHHhh
Q 026252           75 VLPSALLFDCDGVLVD-TEKDGHRISFNDTFKEK  107 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd-~~~~~~~~a~~~~~~~~  107 (241)
                      +|+|+|+||+||||++ .... +.....++++++
T Consensus        10 ~miKli~~DlDGTLl~~~~~~-i~~~~~~al~~l   42 (268)
T 3r4c_A           10 HMIKVLLLDVDGTLLSFETHK-VSQSSIDALKKV   42 (268)
T ss_dssp             SCCCEEEECSBTTTBCTTTCS-CCHHHHHHHHHH
T ss_pred             CceEEEEEeCCCCCcCCCCCc-CCHHHHHHHHHH
Confidence            5699999999999999 4443 444556665554

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=96.90  E-value=0.00041  Score=56.20  Aligned_cols=31  Identities=26%  Similarity=0.404  Sum_probs=22.9

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhh
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEK  107 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~  107 (241)
                      ++|+|+||+||||+++... +...+.++++++
T Consensus         2 ~~kli~~DlDGTLl~~~~~-i~~~~~~al~~l   32 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQKQ-LPLSTIEAVRRL   32 (258)
T ss_dssp             CCCEEEECTBTTTBCTTSC-CCHHHHHHHHHH
T ss_pred             CceEEEEeCCCCCcCCCCc-cCHHHHHHHHHH
Confidence            4799999999999998875 444555555543

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=96.40  E-value=0.0019  Score=52.72  Aligned_cols=31  Identities=19%  Similarity=0.372  Sum_probs=21.0

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHh
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      ++|+|+||+||||++.........+.+++++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~~al~~   32 (271)
T 1rlm_A            2 AVKVIVTDMDGTFLNDAKTYNQPRFMAQYQE   32 (271)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHHHHH
T ss_pred             CccEEEEeCCCCCCCCCCcCCHHHHHHHHHH
Confidence            5799999999999998764222223444443

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=96.39  E-value=0.0033  Score=50.51  Aligned_cols=35  Identities=11%  Similarity=0.246  Sum_probs=27.0

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSF  212 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~  212 (241)
                      +.+.+.+.|++|+++| +++++|+.....+..+++.
T Consensus        24 i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~   58 (239)
T 1u02_A           24 ADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPL   58 (239)
T ss_dssp             CCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCS
T ss_pred             CCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhcc
Confidence            4466678888999999 9999999987766666543

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=96.30  E-value=0.01  Score=53.31  Aligned_cols=50  Identities=20%  Similarity=0.213  Sum_probs=42.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh-c-------------CCCCcccceEEec
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-L-------------GPERAEKIQIFAG  227 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l-~-------------~~~~f~~~~iv~s  227 (241)
                      +...|++.++|++||+.| ++.++||+....+...++.+ |             +.++||  .||+.
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD--~vI~~  308 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFD--LILVD  308 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCS--EEEES
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCC--EEEEe
Confidence            566789999999999999 99999999999999999988 5             346787  55653

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=96.10  E-value=0.0028  Score=51.02  Aligned_cols=32  Identities=25%  Similarity=0.426  Sum_probs=21.9

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHh
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      .+++|+|+||+||||++.... +.....+++++
T Consensus         3 ~~~~kli~~DlDGTLl~~~~~-i~~~~~~al~~   34 (246)
T 2amy_A            3 APGPALCLFDVDGTLTAPRQK-ITKEMDDFLQK   34 (246)
T ss_dssp             -CCSEEEEEESBTTTBCTTSC-CCHHHHHHHHH
T ss_pred             CCCceEEEEECCCCcCCCCcc-cCHHHHHHHHH
Confidence            356899999999999997654 32334444444

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=95.05  E-value=0.037  Score=48.94  Aligned_cols=52  Identities=12%  Similarity=0.084  Sum_probs=43.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhc---------CCCCcccceEEecC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLL---------GPERAEKIQIFAGD  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~---------~~~~f~~~~iv~s~  228 (241)
                      +..-|....+|++||+.|.++.++||+.-..+...+..+-         +.++||  .||+..
T Consensus       185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFD--vVIv~A  245 (470)
T 4g63_A          185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFE--FVITLA  245 (470)
T ss_dssp             EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCS--EEEESC
T ss_pred             hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcC--EEEECC
Confidence            3446899999999999999999999999999999998763         567888  667643

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=94.98  E-value=0.011  Score=48.05  Aligned_cols=31  Identities=19%  Similarity=0.231  Sum_probs=20.5

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHh
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      .++|+|+||+||||++.... +.....+++++
T Consensus        11 ~~~kli~~DlDGTLl~~~~~-is~~~~~al~~   41 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQK-IDPEVAAFLQK   41 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSC-CCHHHHHHHHH
T ss_pred             cCeEEEEEeCccCCCCCCCc-CCHHHHHHHHH
Confidence            46899999999999997754 32334444444

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=94.53  E-value=0.0083  Score=48.50  Aligned_cols=14  Identities=36%  Similarity=0.622  Sum_probs=12.9

Q ss_pred             EEEEecCcccccCc
Q 026252           79 ALLFDCDGVLVDTE   92 (241)
Q Consensus        79 ~ViFD~DGTLvd~~   92 (241)
                      +|+||+||||+++.
T Consensus         2 li~~DlDGTLl~~~   15 (259)
T 3zx4_A            2 IVFTDLDGTLLDER   15 (259)
T ss_dssp             EEEECCCCCCSCSS
T ss_pred             EEEEeCCCCCcCCC
Confidence            68999999999987

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=94.44  E-value=0.028  Score=39.99  Aligned_cols=42  Identities=19%  Similarity=0.112  Sum_probs=27.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ...+...=++..++.|++.+.++ ........+.+.+++.++|
T Consensus        96 ~vgD~~~di~~a~~~G~~~i~~~-~~~~~~~~l~~~~~~~~~f  137 (137)
T 2pr7_A           96 LVDDSILNVRGAVEAGLVGVYYQ-QFDRAVVEIVGLFGLEGEF  137 (137)
T ss_dssp             EEESCHHHHHHHHHHTCEEEECS-CHHHHHHHHHHHHTCCSCC
T ss_pred             EEcCCHHHHHHHHHCCCEEEEeC-ChHHHHHHHHHHhCCccCC
Confidence            34444555788888899655554 4445566677777777665

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=94.14  E-value=0.071  Score=41.87  Aligned_cols=51  Identities=12%  Similarity=0.016  Sum_probs=42.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC-CCcccceEEecC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP-ERAEKIQIFAGD  228 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~-~~f~~~~iv~s~  228 (241)
                      ....||+.++|+.|. +++.++|.|.+....+..+++.++.. .+|.  ..+..+
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~--~rl~R~  109 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVS--YNLFKE  109 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEE--EEECGG
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEE--EEEEec
Confidence            467899999999998 67999999999999999999999876 4776  444443

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=93.86  E-value=0.11  Score=42.18  Aligned_cols=48  Identities=15%  Similarity=0.160  Sum_probs=38.1

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHHhcCC-CCcccceEEec
Q 026252          178 RPGVAKLIDQALEKGVKVAVCST---SNEKAVTAIVSFLLGP-ERAEKIQIFAG  227 (241)
Q Consensus       178 ~pgv~elL~~Lk~~gi~v~ivTn---~~~~~~~~~l~~l~~~-~~f~~~~iv~s  227 (241)
                      +|++.+.|++|+++|++++++||   .....+...++.+|+. ..++  .++++
T Consensus        32 ~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~--~ii~~   83 (284)
T 2hx1_A           32 LPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITAD--KIISS   83 (284)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGG--GEEEH
T ss_pred             ChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHh--hEEcH
Confidence            48899999999999999999998   3566777788888776 5554  45554

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=93.20  E-value=0.11  Score=48.04  Aligned_cols=44  Identities=18%  Similarity=0.147  Sum_probs=40.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.|++.+.|+.|+++|++++++|+.+...++.+.+.+|+..++
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~  500 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI  500 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEE
Confidence            58899999999999999999999999999999999999876544

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=93.06  E-value=0.046  Score=43.78  Aligned_cols=26  Identities=15%  Similarity=0.247  Sum_probs=17.9

Q ss_pred             EEEEecCcccccCccchHHHHHHHHHHh
Q 026252           79 ALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        79 ~ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      .|+||+||||++.... . ....+++++
T Consensus         5 li~~DlDGTLl~~~~~-~-~~~~~~l~~   30 (244)
T 1s2o_A            5 LLISDLDNTWVGDQQA-L-EHLQEYLGD   30 (244)
T ss_dssp             EEEECTBTTTBSCHHH-H-HHHHHHHHT
T ss_pred             EEEEeCCCCCcCCHHH-H-HHHHHHHHH
Confidence            8999999999997642 2 344444443

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=91.48  E-value=0.23  Score=46.50  Aligned_cols=44  Identities=18%  Similarity=0.147  Sum_probs=40.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.|++.+.|+.|+++|+++.++|+.+...+..+.+.+|+..++
T Consensus       535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~  578 (723)
T 3j09_A          535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI  578 (723)
T ss_dssp             CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEE
Confidence            68899999999999999999999999999999999999876444

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=90.88  E-value=0.27  Score=39.41  Aligned_cols=48  Identities=19%  Similarity=0.216  Sum_probs=33.1

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHhcCCCCcccceEEec
Q 026252          178 RPGVAKLIDQALEKGVKVAVCSTSNE---KAVTAIVSFLLGPERAEKIQIFAG  227 (241)
Q Consensus       178 ~pgv~elL~~Lk~~gi~v~ivTn~~~---~~~~~~l~~l~~~~~f~~~~iv~s  227 (241)
                      .|++.+.|++|+++|++++++||...   ......++.+|+....+  .++++
T Consensus        19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~--~i~~~   69 (263)
T 1zjj_A           19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSS--IIITS   69 (263)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGG--GEEEH
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChh--hEEec
Confidence            37899999999999999999999864   33334444556543333  45543

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=90.61  E-value=0.49  Score=38.84  Aligned_cols=39  Identities=15%  Similarity=0.161  Sum_probs=31.7

Q ss_pred             ChhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHHhcCC
Q 026252          178 RPGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGP  216 (241)
Q Consensus       178 ~pgv~elL~~Lk~~gi~v~ivTn~---~~~~~~~~l~~l~~~  216 (241)
                      .|++.+.|+.|+++|++++++||+   ........++.+|+.
T Consensus        39 ~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           39 VPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG   80 (306)
T ss_dssp             CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred             CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence            478889999999999999999984   556666777777664

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=90.51  E-value=0.26  Score=46.16  Aligned_cols=44  Identities=11%  Similarity=0.251  Sum_probs=40.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.|++.+.|++|+++|+++.++|+.+...+..+.+.+|+.+++
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~  597 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVV  597 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEE
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEE
Confidence            67899999999999999999999999999999999999876544

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=89.73  E-value=0.48  Score=45.96  Aligned_cols=43  Identities=21%  Similarity=0.196  Sum_probs=40.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPER  218 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~  218 (241)
                      ++.||+.+.|+.|++.|+++.++|+.....+..+.+.+|+...
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~  645 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE  645 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCT
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCC
Confidence            6789999999999999999999999999999999999988654

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=88.62  E-value=0.71  Score=40.46  Aligned_cols=54  Identities=9%  Similarity=0.250  Sum_probs=44.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC-CcccceEEecCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE-RAEKIQIFAGDVV  230 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~-~f~~~~iv~s~~~  230 (241)
                      +.+.||+.++|++|. +.|.++|.|.+.+..+..+++.++... +|.. .+++.++.
T Consensus        82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~-Rl~sRd~c  136 (442)
T 3ef1_A           82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQD-RVLSRDDS  136 (442)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTTSTTTTT-CEECTTTS
T ss_pred             EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccCCccccc-eEEEecCC
Confidence            678899999999998 569999999999999999999997766 6763 36655543

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=87.97  E-value=1  Score=35.81  Aligned_cols=40  Identities=13%  Similarity=0.173  Sum_probs=31.7

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHHhcCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGP  216 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~---~~~~~~~~l~~l~~~  216 (241)
                      +.|++.+.|++|+++|++++++||.   ........++.+|+.
T Consensus        34 ~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~   76 (271)
T 1vjr_A           34 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD   76 (271)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred             ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence            3478889999999999999999965   556666677777654

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=87.29  E-value=0.76  Score=44.72  Aligned_cols=41  Identities=20%  Similarity=0.211  Sum_probs=38.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.|++|++.|+++.++|+.....+..+.+.+|+.
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~  639 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  639 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999999875

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=86.34  E-value=0.84  Score=43.87  Aligned_cols=42  Identities=14%  Similarity=0.046  Sum_probs=39.2

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+..
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~  576 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGT  576 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCc
Confidence            588999999999999999999999999999999999998753

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=85.48  E-value=0.33  Score=36.61  Aligned_cols=18  Identities=28%  Similarity=0.416  Sum_probs=15.1

Q ss_pred             CCCcEEEEecCcccccCc
Q 026252           75 VLPSALLFDCDGVLVDTE   92 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~   92 (241)
                      ..+|+++||+||||++..
T Consensus        12 ~~~k~~~~D~Dgtl~~~~   29 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEP   29 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC
T ss_pred             CcCcEEEEeCCCCeEcCC
Confidence            468999999999998763

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=85.03  E-value=0.79  Score=43.86  Aligned_cols=41  Identities=24%  Similarity=0.137  Sum_probs=38.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+.
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~  528 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG  528 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence            57899999999999999999999999999999999999875

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=84.03  E-value=0.38  Score=37.38  Aligned_cols=17  Identities=29%  Similarity=0.321  Sum_probs=15.0

Q ss_pred             CCCcEEEEecCcccccC
Q 026252           75 VLPSALLFDCDGVLVDT   91 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~   91 (241)
                      .++++++||+||||++.
T Consensus        29 ~~~k~i~~D~DGtl~~~   45 (218)
T 2o2x_A           29 PHLPALFLDRDGTINVD   45 (218)
T ss_dssp             SSCCCEEECSBTTTBCC
T ss_pred             hcCCEEEEeCCCCcCCC
Confidence            45799999999999986

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=83.99  E-value=1.4  Score=42.94  Aligned_cols=41  Identities=17%  Similarity=0.186  Sum_probs=38.3

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ++.|++.+.|++|+++|+++.++|+.....+..+.+.+|+.
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII  644 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            68899999999999999999999999999999999988774

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=82.48  E-value=0.54  Score=36.36  Aligned_cols=18  Identities=22%  Similarity=0.292  Sum_probs=15.5

Q ss_pred             CCCcEEEEecCcccccCc
Q 026252           75 VLPSALLFDCDGVLVDTE   92 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~   92 (241)
                      ...+++|+|+||||+++.
T Consensus        26 ~~k~~LVLDLD~TLvhs~   43 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSS   43 (195)
T ss_dssp             TTCCEEEECCBTTTEEEE
T ss_pred             CCCeEEEEccccceEccc
Confidence            456899999999999975

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=81.68  E-value=1.8  Score=36.25  Aligned_cols=42  Identities=14%  Similarity=0.260  Sum_probs=37.3

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      .+||+.++|+++.+ .|.++|.|.+....+..+++.++....+
T Consensus       165 ~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vld~Ld~~~~~  206 (320)
T 3shq_A          165 MRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKMRLLGVASND  206 (320)
T ss_dssp             BCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHHHHTTCTTCS
T ss_pred             eCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHhCCCCCc
Confidence            56999999999996 5999999999999999999999766553

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=80.01  E-value=3.1  Score=33.41  Aligned_cols=42  Identities=14%  Similarity=0.154  Sum_probs=37.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ..+.+.+.+.|++|+++|+.++++|+.....+..+++.+++.
T Consensus        22 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~   63 (290)
T 3dnp_A           22 GKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD   63 (290)
T ss_dssp             SCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred             CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence            357788999999999999999999999988888888888665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	241
d1cr6a1	222	c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal	2e-11
d1swva_	257	c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba	5e-11
d1te2a_	218	c.108.1.6 (A:) Phosphatase YniC {Escherichia coli	8e-09
d2fdra1	222	c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {	2e-08
d2go7a1	204	c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S	2e-08
d1zd3a1	225	c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal	5e-08
d1o08a_	221	c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu	9e-08
d1x42a1	230	c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A	2e-07
d2gfha1	247	c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas	2e-07
d2b0ca1	197	c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc	3e-07
d2hdoa1	207	c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {	4e-07
d2hcfa1	228	c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C	6e-07
d2hsza1	224	c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G	1e-06
d2fi1a1	187	c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str	2e-06
d2ah5a1	210	c.108.1.6 (A:1-210) predicted phosphatase SP0104 {	3e-06
d1qq5a_	245	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan	1e-05
d1zrna_	220	c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse	1e-05
d1zs9a1	253	c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien	5e-04
d2g80a1	225	c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast	7e-04
d1u7pa_	164	c.108.1.17 (A:) Magnesium-dependent phosphatase-1,	0.001
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	0.002
d1qyia_	380	c.108.1.13 (A:) Hypothetical protein MW1667 (SA154	0.004

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.8 bits (143), Expect = 2e-11
 Identities = 23/165 (13%), Positives = 45/165 (27%), Gaps = 6/165 (3%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
              FD DGVL      G   +F  + +   L   + +  Y      G  ++ M      +
Sbjct: 2   VAAFDLDGVLALPSIAG---AFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFS 58

Query: 139 GWPEKAPSD-EEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAV 197
            W         +  K   A+L +  +   +         +   + +      +KG    +
Sbjct: 59  QWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCI 118

Query: 198 CSTSNEKAVTAIVSFLL--GPERAEKIQIFAGDVVPRKKPDPLCC 240
            + +         S              +     V   KP+P   
Sbjct: 119 VTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIY 163

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

 Score = 58.6 bits (140), Expect = 5e-11
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 8/128 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE---RMTAYF 135
           A++F   G  VD         F + F   + GV    +   +   +G  K    R     
Sbjct: 4   AVIFAWAGTTVDYGCFAPLEVFMEIF--HKRGVAITAEEARKP--MGLLKIDHVRALTEM 59

Query: 136 NKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
            +          +   +  I  +++   E+   ++ +   P+  GV ++I    E+G+K+
Sbjct: 60  PRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPI-NGVKEVIASLRERGIKI 118

Query: 196 AVCSTSNE 203
              +    
Sbjct: 119 GSTTGYTR 126

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

 Score = 52.1 bits (123), Expect = 8e-09
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A +FD DG+L+D+E      +  D      LGV        EL    G +  M       
Sbjct: 5   AAIFDMDGLLIDSEPL-WDRAELDVM--ASLGVDISRR--NELPDTLGLRIDMVVDLWYA 59

Query: 139 GWPEKAPSDEEERKQFIA 156
             P   PS +E  ++ IA
Sbjct: 60  RQPWNGPSRQEVVERVIA 77

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 51.4 bits (121), Expect = 2e-08
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLK 123
            ++FDCDGVLVD+E        +      E G    V+  GE   
Sbjct: 4   LIIFDCDGVLVDSEII-AAQVESRLL--TEAGYPISVEEMGERFA 45

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 50.6 bits (119), Expect = 2e-08
 Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 6/94 (6%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNK 137
           +A ++D DG L+D+ +        +TF   +  + +D +   ++ +              
Sbjct: 2   TAFIWDLDGTLLDSYEA-ILSGIEETF--AQFSIPYDKE---KVREFIFKYSVQDLLVRV 55

Query: 138 TGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE 171
                       + +    +    +  L     E
Sbjct: 56  AEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGARE 89

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 5e-08
 Identities = 23/168 (13%), Positives = 42/168 (25%), Gaps = 11/168 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A +FD DGVL              T +   L      D + +    G     M      +
Sbjct: 4   AAVFDLDGVLALPAVF---GVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLS 60

Query: 139 GWPE---KAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKV 195
            W     +      E  +     +    E+F   I      +   + +      +KG   
Sbjct: 61  QWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISA--RKINRPMLQAALMLRKKGFTT 118

Query: 196 AVCSTSNEKAVTAIVSFLL---GPERAEKIQIFAGDVVPRKKPDPLCC 240
           A+ + +                  +      I +  V   K    +  
Sbjct: 119 AILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYK 166

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

 Score = 49.1 bits (115), Expect = 9e-08
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+LFD DGV+ DT +  H  ++      +E+G+      + E LK    ++ +    +  
Sbjct: 4   AVLFDLDGVITDTAEY-HFRAWKALA--EEIGINGVDRQFNEQLKGVSREDSLQKILDLA 60

Query: 139 GW 140
             
Sbjct: 61  DK 62

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 47.9 bits (112), Expect = 2e-07
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 79  ALLFDCDGVLVDTEKDG--HRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN 136
           A+ FD  G L+  E +   H     +   +  L     +D Y +L      +E  + Y  
Sbjct: 4   AVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLT-----REAFSNYAG 58

Query: 137 KTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIE--KKLLPLRPGVAKLIDQALEKGVK 194
           K   P +   +E  RK       K     + + +   ++   L P V +++     K   
Sbjct: 59  KPYRPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHV 118

Query: 195 VAVC 198
             + 
Sbjct: 119 GMIT 122

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.3 bits (113), Expect = 2e-07
 Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 16/131 (12%)

Query: 62  MSMRNVRVTCSASVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTW--DVDLYG 119
           M +  VR          A+ FD D  L+DT     R    +  K  +    +  + ++  
Sbjct: 1   MGLSRVR----------AVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKEEAEIIC 49

Query: 120 ELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEK---KLLP 176
           + +++   KE    Y         +  +E  ++    + +++  E    L +    + + 
Sbjct: 50  DKVQVKLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMI 109

Query: 177 LRPGVAKLIDQ 187
           L   V  ++ +
Sbjct: 110 LADDVKAMLTE 120

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

 Score = 47.5 bits (111), Expect = 3e-07
 Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 81  LFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGW 140
           +FD   V+VD + +    +++D  +     +     +     +   G+    A+      
Sbjct: 4   IFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCH 63

Query: 141 PEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCST 200
               P   E+               F    +   + LRP V  ++ +  E+G +V V S 
Sbjct: 64  EMALPLSYEQ---------------FSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSN 108

Query: 201 SNEKAVTAIVSFLLG 215
           +N    T        
Sbjct: 109 TNRLHTTFWPEEYPE 123

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

 Score = 46.8 bits (109), Expect = 4e-07
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELL 122
           AL+FD DG L +++   +     +       G  +      +  
Sbjct: 5   ALMFDIDGTLTNSQPA-YTTVMREVL--ATYGKPFSPAQAQKTF 45

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

 Score = 46.7 bits (109), Expect = 6e-07
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 10/123 (8%)

Query: 80  LLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTG 139
           +LFD DG L+  E   +R    D   E   G       +    K+ G    +    +  G
Sbjct: 5   VLFDIDGTLLKVESM-NRRVLADALIE-VYGTEGSTGSHDFSGKMDG--AIIYEVLSNVG 60

Query: 140 WPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCS 199
                     E         +    LF     ++ + L  GV +L+D    +   +    
Sbjct: 61  LE------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLL 114

Query: 200 TSN 202
           T N
Sbjct: 115 TGN 117

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

 Score = 45.3 bits (105), Expect = 1e-06
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
            + FD DG LV++  D   +S N   K+  L    +
Sbjct: 6   LIGFDLDGTLVNSLPD-LALSINSALKDVNLPQASE 40

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 44.3 bits (103), Expect = 2e-06
 Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 3/36 (8%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
             ++D  G L+D  +     +F +T      G+T D
Sbjct: 5   DYIWDLGGTLLDNYET-STAAFVETL--ALYGITQD 37

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 44.4 bits (103), Expect = 3e-06
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWD 114
           A+ FD DG LVD+       +F  TF  KELGV   
Sbjct: 6   AIFFDLDGTLVDSSIG-IHNAFTYTF--KELGVPSP 38

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

 Score = 43.2 bits (100), Expect = 1e-05
 Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 12/113 (10%)

Query: 79  ALLFDCDGVLVDTEK---------DGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE 129
           A++FD  G L D +           G        +++K+L  +W   L G          
Sbjct: 4   AVVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVA 182
              AY   T   E    DE        + ++            +L PL+  + 
Sbjct: 64  EALAYTLGTLGLEP---DESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAIL 113

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

 Score = 43.0 bits (99), Expect = 1e-05
 Identities = 13/90 (14%), Positives = 23/90 (25%), Gaps = 9/90 (10%)

Query: 79  ALLFDCDGVLVDTEKD---------GHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKE 129
            + FD  G L D             G     +  +++K+L  TW   L    +      E
Sbjct: 4   GIAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATE 63

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLH 159
               +  +    +               L 
Sbjct: 64  DALRFTCRHLGLDLDARTRSTLCDAYLRLA 93

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (87), Expect = 5e-04
 Identities = 21/191 (10%), Positives = 55/191 (28%), Gaps = 27/191 (14%)

Query: 76  LPS---ALLFDCDGVLVDTEKDGHRISFNDTFK--EKELGVTWDVDLYGELLK-IGGGKE 129
           +P+    +L D +G           I F    +  ++ L   W+ +   + +  +    E
Sbjct: 3   VPAEVTVILLDIEGTTTPIAFV-KDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAE 61

Query: 130 RMTAYFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKL--------------- 174
                      P  + +  ++ +Q I ++         +  +                  
Sbjct: 62  EDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTA 121

Query: 175 ----LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV 230
                     V   + +  E G+KV + S+ + +A   +       +  E +       +
Sbjct: 122 GRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKI 181

Query: 231 PRK-KPDPLCC 240
             K + +    
Sbjct: 182 GHKVESESYRK 192

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.5 bits (85), Expect = 7e-04
 Identities = 16/167 (9%), Positives = 44/167 (26%), Gaps = 9/167 (5%)

Query: 78  SALLFDCDGVLVDTEKDGHRISFNDTFK--EKELGVTWDVDLYGELLK--IGGGKERMTA 133
           S  L D +G +           F        + +           +L       KE++ A
Sbjct: 4   STYLLDIEGTVCPISFV-KETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQA 62

Query: 134 YFNKTGWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGV 193
           +  +    +      ++ + ++ +      ++   +    +  ++      I  +     
Sbjct: 63  HILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKA 122

Query: 194 KVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC 240
           +  +     +    A  S  L       I  +       KK +    
Sbjct: 123 QKLLFGYVQDPNAPAHDSLDL----NSYIDGYFDINTSGKKTETQSY 165

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (83), Expect = 0.001
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 5/66 (7%)

Query: 76  LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF 135
           LP   +FD D  L     D H    +  F +   G     D  G+ +++      +    
Sbjct: 4   LPKLAVFDLDYTLWPFWVDTH---VDPPFHKSSDGTV--RDRRGQNIQLYPEVPEVLGRL 58

Query: 136 NKTGWP 141
              G P
Sbjct: 59  QSLGVP 64

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (81), Expect = 0.002
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 27/125 (21%)

Query: 79  ALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKT 138
           A+ FD D  ++  E                     D     EL KI G ++ ++    + 
Sbjct: 12  AVCFDVDSTVIREE-------------------GID-----ELAKICGVEDAVSEMTRRA 47

Query: 139 GWPEKAPSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVC 198
                     +       +L +   E    LI ++   L PG+ +L+ +  E+ V+V + 
Sbjct: 48  MGGAV---PFKAALTERLALIQPSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLI 104

Query: 199 STSNE 203
           S    
Sbjct: 105 SGGFR 109

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

 Score = 35.6 bits (81), Expect = 0.004
 Identities = 12/74 (16%), Positives = 19/74 (25%), Gaps = 11/74 (14%)

Query: 175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVV---- 230
           L     V  L++     G ++ + +             L      E   I     V    
Sbjct: 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAE 273

Query: 231 -------PRKKPDP 237
                  P  KP+P
Sbjct: 274 NMYPQARPLGKPNP 287

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	241
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.88
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.85
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.85
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.84
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.84
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.83
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.8
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.77
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.76
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.75
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.72
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.7
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.63
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.63
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.59
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.59
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.54
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.31
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.3
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.22
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.22
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	98.96
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	98.95
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.71
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	98.64
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	98.63
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.47
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.42
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	98.28
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.22
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.05
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.04
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	97.84
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.81
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	97.72
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	97.72
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	97.65
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	97.62
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	97.56
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	97.52
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.46
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.42
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.26
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.21
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	97.18
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	96.94
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.5
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	96.45
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	96.27
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.93
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	95.23
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	95.16
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	94.76
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	93.97
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	93.04
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	92.04
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	91.37
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	91.02
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	90.56
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	82.88

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=9.4e-23  Score=162.16  Aligned_cols=148  Identities=20%  Similarity=0.337  Sum_probs=107.7

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  154 (241)
                      .|+|||||+||||+|+++. +..+|+++++++|.+.... +.+...  .+........... ...+.      ....++.
T Consensus         2 ~i~a~iFD~DGTL~dt~~~-~~~a~~~~~~~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~   71 (218)
T d1te2a_           2 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISRR-NELPDT--LGLRIDMVVDLWYARQPWN------GPSRQEV   71 (218)
T ss_dssp             CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGGG-GGSCCC--TTCCHHHHHHHHHHHSCCS------SSCHHHH
T ss_pred             cceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCCHH-HHHHHH--hCCCccchhhhhhhccccc------chhHHHH
Confidence            5899999999999999885 8889999999998875432 222221  3344444333322 33221      1122233


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+...+...+.+    ... .+++||+.++|+.|+++|++++|+||+.+..+..+++.+|+.++|+  .++++++++..|
T Consensus        72 ~~~~~~~~~~~~----~~~-~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~--~i~~~~~~~~~K  144 (218)
T d1te2a_          72 VERVIARAISLV----EET-RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD--ALASAEKLPYSK  144 (218)
T ss_dssp             HHHHHHHHHHHH----HHH-CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEECTTSSCCT
T ss_pred             HHHHHHHHHHhh----hcc-ccccchHHHHHHHhhhcccccccccccccccccccccccccccccc--ccccccccccch
Confidence            333333333322    222 5789999999999999999999999999999999999999999999  899999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       145 p~~~~~  150 (218)
T d1te2a_         145 PHPQVY  150 (218)
T ss_dssp             TSTHHH
T ss_pred             hhHHHH
Confidence            999876

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.85  E-value=9.2e-22  Score=156.45  Aligned_cols=156  Identities=21%  Similarity=0.228  Sum_probs=109.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERK  152 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (241)
                      |.++|+|+||+||||+|+.+. +..+++++++++|.... ..+.+...  .+........... ...............+
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPD-LALSINSALKDVNLPQA-SENLVMTW--IGNGADVLSQRAVDWACKQAEKELTEDEFK   76 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHH-HHHHHHHHHHHTTCCCC-CHHHHHHH--CSSCHHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHCCCCCC-cHHHHHHH--hhhhhhhhhhhhhhhhhhhhhhhhhHHHHH
Confidence            467999999999999999985 88899999999988754 34444443  4444433222211 1110111122222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCC
Q 026252          153 QFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPR  232 (241)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~  232 (241)
                      ....    .....+ .........++||+.++|..|+++|++++++||+.+..+..+++.+|+.++|+  .++++++.+.
T Consensus        77 ~~~~----~~~~~~-~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~--~~~~~~~~~~  149 (224)
T d2hsza1          77 YFKR----QFGFYY-GENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS--EMLGGQSLPE  149 (224)
T ss_dssp             HHHH----HHHHHH-HHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS--EEECTTTSSS
T ss_pred             HHHH----HHHHHH-HHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc--cccccccccc
Confidence            2211    111222 11223347899999999999999999999999999999999999999999999  8999999999


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       150 ~kp~p~~~  157 (224)
T d2hsza1         150 IKPHPAPF  157 (224)
T ss_dssp             CTTSSHHH
T ss_pred             ccccchhh
Confidence            99999875

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.85  E-value=1.3e-21  Score=152.44  Aligned_cols=140  Identities=16%  Similarity=0.169  Sum_probs=101.3

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++|+||||+||||+|+... +..+|+++++.+|...+  .+.....  .+.......+.+...        .+.    +
T Consensus         1 M~~k~viFD~DGTL~dt~~~-~~~~~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~~~~~~~~--------~~~----~   63 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYET-STAAFVETLALYGITQD--HDSVYQA--LKVSTPFAIETFAPN--------LEN----F   63 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHH-HHHHHHHHHHHTTCCCC--HHHHHHH--HHHCHHHHHHHHCTT--------CTT----H
T ss_pred             CCCCEEEEeCCCCcccCHHH-HHHHHHHHHHHcCCCcc--HHHHHhh--hhccchhhhhhhhHH--------HHH----H
Confidence            56999999999999999885 78899999999887653  4444443  233333333332211        111    1


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .+.+.    +.+...+  ....++||+.++|+.|+++|++++|+||+..... ..++.+++..+|+  .++++++++..|
T Consensus        64 ~~~~~----~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd--~i~~~~~~~~~K  134 (187)
T d2fi1a1          64 LEKYK----ENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFT--EVVTSSSGFKRK  134 (187)
T ss_dssp             HHHHH----HHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEE--EEECGGGCCCCT
T ss_pred             HHHHH----HHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccc--cccccccccccC
Confidence            12222    2222222  2368999999999999999999999999986655 5789999999999  899999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       135 P~p~~~  140 (187)
T d2fi1a1         135 PNPESM  140 (187)
T ss_dssp             TSCHHH
T ss_pred             CCHHHH
Confidence            999876

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.84  E-value=5.5e-22  Score=156.78  Aligned_cols=143  Identities=17%  Similarity=0.265  Sum_probs=106.1

Q ss_pred             CCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           75 VLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      |++|+|+||+||||+|+.+. +..+|+++++++|.+..  .++....  .+........   ..+.      .....+++
T Consensus         1 M~~k~viFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~--~~~~~~~~~~---~~~~------~~~~~~~~   66 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPA-YTTVMREVLATYGKPFS--PAQAQKT--FPMAAEQAMT---ELGI------AASEFDHF   66 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHH-HHHHHHHHHHTTTCCCC--HHHHHHH--TTSCHHHHHH---HTTC------CGGGHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH--hcchhhhhhh---cccc------chhhHHHH
Confidence            45899999999999999985 77899999999988643  3444443  4444443332   2221      12222333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      ...    +.+.+.+...  ..+++||+.++|+.|++ +++++|+||+....++..++.+++..+|+  .++++++.+..|
T Consensus        67 ~~~----~~~~~~~~~~--~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~--~i~~~~~~~~~K  137 (207)
T d2hdoa1          67 QAQ----YEDVMASHYD--QIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA--VTISADDTPKRK  137 (207)
T ss_dssp             HHH----HHHHHTTCGG--GCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEE--EEECGGGSSCCT
T ss_pred             HHH----hhhhhccccc--ccccccchhhhhhhhcc-ccccccccccccccccccccccccccccc--ccccccccccch
Confidence            332    2333333222  26899999999999975 69999999999999999999999999998  899999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       138 P~p~~~  143 (207)
T d2hdoa1         138 PDPLPL  143 (207)
T ss_dssp             TSSHHH
T ss_pred             hhhhhh
Confidence            999876

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.84  E-value=3.8e-21  Score=156.64  Aligned_cols=151  Identities=16%  Similarity=0.199  Sum_probs=105.6

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-----------hcCCCCCC
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-----------KTGWPEKA  144 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  144 (241)
                      +||+||||+||||+|+.......++.+++.++|.+..  .+++...  .|.......+.+.           ..+.    
T Consensus         1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~----   72 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAIT--AEEARKP--MGLLKIDHVRALTEMPRIASEWNRVFRQ----   72 (257)
T ss_dssp             CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCC--HHHHHTT--TTSCHHHHHHHHHHSHHHHHHHHHHHSS----
T ss_pred             CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCC--HHHHHHH--hCCcHHHHHHHHhhhhhhhHHHHHHhcc----
Confidence            5899999999999999875456789999999887643  3444332  2332222111111           0110    


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceE
Q 026252          145 PSDEEERKQFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQI  224 (241)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~i  224 (241)
                      .......    +.......+.+...+.. ...++||+.++|+.|+++|++++|+||+++..++..++.+|+.++|.. .+
T Consensus        73 ~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d-~~  146 (257)
T d1swva_          73 LPTEADI----QEMYEEFEEILFAILPR-YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD-FL  146 (257)
T ss_dssp             CCCHHHH----HHHHHHHHHHHHHHGGG-GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS-CC
T ss_pred             cCCHHHH----HHHHHHHHHHHHHHhhc-cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc-cc
Confidence            1122222    23333334444443333 368999999999999999999999999999999999999999988732 78


Q ss_pred             EecCCCCCCCCCCCCC
Q 026252          225 FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       225 v~s~~~~~~KP~p~~f  240 (241)
                      +++++++.+||+|++|
T Consensus       147 ~~~d~~~~~KP~p~~~  162 (257)
T d1swva_         147 VTPDDVPAGRPYPWMC  162 (257)
T ss_dssp             BCGGGSSCCTTSSHHH
T ss_pred             cccccccccccChHHH
Confidence            9999999999999876

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.83  E-value=1.3e-20  Score=148.39  Aligned_cols=141  Identities=16%  Similarity=0.216  Sum_probs=99.7

Q ss_pred             cEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHH-HhcCCCCCCCCCHHHHHHHHH
Q 026252           78 SALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYF-NKTGWPEKAPSDEEERKQFIA  156 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  156 (241)
                      +|||||+||||+|+.+. +..+|+++++++|.+..  .+...... .+.........+ ...+.      ..+..    .
T Consensus         2 ~a~iFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~----~   67 (204)
T d2go7a1           2 TAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPYD--KEKVREFI-FKYSVQDLLVRVAEDRNL------DVEVL----N   67 (204)
T ss_dssp             CEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCCC--HHHHHHHH-HHSCHHHHHHHHHHHHTC------CHHHH----H
T ss_pred             EEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCCCC--HHHHHHhh-cccccccccccccchhhh------hHHHH----H
Confidence            68999999999999985 77899999999988654  34443332 333444443332 22211      11111    1


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCC
Q 026252          157 SLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPD  236 (241)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~  236 (241)
                      .+.   ..++...  .....++||+.++|+.|+++|++++|+||+.. .+..+++++|+.+||+  .++++++.+..||+
T Consensus        68 ~~~---~~~~~~~--~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~--~i~~s~~~~~~Kp~  139 (204)
T d2go7a1          68 QVR---AQSLAEK--NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT--EILTSQSGFVRKPS  139 (204)
T ss_dssp             HHH---HHHHTTC--GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE--EEECGGGCCCCTTS
T ss_pred             HHH---HHHHHhh--cccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc--cccccccccccchh
Confidence            111   1111111  12368899999999999999999999999875 4567899999999999  89999999999999


Q ss_pred             CCCC
Q 026252          237 PLCC  240 (241)
Q Consensus       237 p~~f  240 (241)
                      |++|
T Consensus       140 ~~~~  143 (204)
T d2go7a1         140 PEAA  143 (204)
T ss_dssp             SHHH
T ss_pred             HHHH
Confidence            9876

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.80  E-value=4.2e-20  Score=146.88  Aligned_cols=150  Identities=21%  Similarity=0.242  Sum_probs=107.4

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQFI  155 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (241)
                      |||+||||+||||+|+... +..+|++++.++|.+...  +.+... ..+.........+....-   .....+...++.
T Consensus         1 MikaiiFD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   73 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEY-HFRAWKALAEEIGINGVD--RQFNEQ-LKGVSREDSLQKILDLAD---KKVSAEEFKELA   73 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHH-HHHHHHHHHHHTTCCCCC--HHHHTT-TTTCCHHHHHHHHHTTSS---SCCCHHHHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHH-HHHHHHHHHHHcCCCCCh--HHHHHH-Hhhccchhhhhhcccccc---ccchhhhhhhHH
Confidence            6899999999999999885 778999999999887543  333222 134444444444332211   123344444333


Q ss_pred             HHHHHHHHHHHHHHHHh-cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCC
Q 026252          156 ASLHKRKTELFMVLIEK-KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKK  234 (241)
Q Consensus       156 ~~~~~~~~~~~~~~~~~-~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~K  234 (241)
                      .    ...+.|.+.+.. ....++||+.++|+.|++.|++++++||+.  .....++.+++.++|+  .++++++.+.+|
T Consensus        74 ~----~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~--~i~~~~~~~~~K  145 (221)
T d1o08a_          74 K----RKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFD--AIADPAEVAASK  145 (221)
T ss_dssp             H----HHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCS--EECCTTTSSSCT
T ss_pred             H----HHHhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhccccccc--cccccccccccc
Confidence            3    333444443332 225789999999999999999999999985  4678899999999999  789999999999


Q ss_pred             CCCCCC
Q 026252          235 PDPLCC  240 (241)
Q Consensus       235 P~p~~f  240 (241)
                      |+|++|
T Consensus       146 P~~~~~  151 (221)
T d1o08a_         146 PAPDIF  151 (221)
T ss_dssp             TSTHHH
T ss_pred             cChHHH
Confidence            999876

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.4e-18  Score=138.75  Aligned_cols=155  Identities=14%  Similarity=0.133  Sum_probs=96.2

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      |.+||+|+||+||||+|+... ...++.++++.++............. .      .....+..................
T Consensus         3 m~~IKaviFD~dGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~   74 (247)
T d2gfha1           3 LSRVRAVFFDLDNTLIDTAGA-SRRGMLEVIKLLQSKYHYKEEAEIIC-D------KVQVKLSKECFHPYSTCITDVRTS   74 (247)
T ss_dssp             CCCCCEEEECCBTTTBCHHHH-HHHHHHHHHHHHHHTTCCCTHHHHHH-H------HHHHHHHTCCCC----CHHHHHHH
T ss_pred             CCCCcEEEEcCCCCcCcChHH-HHHHHHHHHHHhccccCcHHHHHHHH-H------HHHHHHhhhhhhhhhhhhhHHHHH
Confidence            578999999999999999875 66778887776654433321111000 0      000000000000000000000000


Q ss_pred             HH-------------HHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          154 FI-------------ASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       154 ~~-------------~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .+             ..+.+.....+..... ....++||+.++|+.|+ +|++++|+||+....+...++.+|+.++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd  152 (247)
T d2gfha1          75 HWEEAIQETKGGADNRKLAEECYFLWKSTRL-QHMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFD  152 (247)
T ss_dssp             HHHHHHHHHHCSSCCHHHHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS
T ss_pred             HHHHHHHHhccccchHHHHHHHHHHHHHhhh-ccCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhcccccccc
Confidence            00             0111111122222222 23789999999999998 579999999999999999999999999998


Q ss_pred             cceEEecCCCCCCCCCCCCC
Q 026252          221 KIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       221 ~~~iv~s~~~~~~KP~p~~f  240 (241)
                        .++++++++..||+|++|
T Consensus       153 --~i~~s~~~~~~KP~p~~~  170 (247)
T d2gfha1         153 --AIVIGGEQKEEKPAPSIF  170 (247)
T ss_dssp             --EEEEGGGSSSCTTCHHHH
T ss_pred             --ccccccccccchhhhhhH
Confidence              899999999999999887

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.76  E-value=3.9e-19  Score=142.03  Aligned_cols=149  Identities=16%  Similarity=0.129  Sum_probs=105.5

Q ss_pred             CcEEEEecCcccccCccchHHHHHHHHHHhh-cCCCCCCHHHHHHHHHhCCchHH-HHHHHHhcCCCCCCCCCHHHHHHH
Q 026252           77 PSALLFDCDGVLVDTEKDGHRISFNDTFKEK-ELGVTWDVDLYGELLKIGGGKER-MTAYFNKTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  154 (241)
                      .|.||||+||||+|+... +..++++++.+. |.........+     .+..... ....+...++      ......+.
T Consensus         2 ~klviFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~------~~~~~~~~   69 (228)
T d2hcfa1           2 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGSTGSHDF-----SGKMDGAIIYEVLSNVGL------ERAEIADK   69 (228)
T ss_dssp             CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCCC---CC-----TTCCHHHHHHHHHHTTTC------CHHHHHHH
T ss_pred             ceEEEEeCCCCcccCHHH-HHHHHHHHHHHHcCCCccHHHHHH-----hcCchHHHHHHHHHHhCC------ChHHHHHH
Confidence            378999999999999995 777888887764 33322211111     2222222 3334444432      23333334


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCC-CeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKG-VKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~g-i~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      ++...+.+.+.+.+........++||+.++|+.|+++| ++++|+||+....+...++.+|+.++|+  .++++++...+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd--~i~~~~~~~~~  147 (228)
T d2hcfa1          70 FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDALDR  147 (228)
T ss_dssp             HHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS--CEECTTTCSSG
T ss_pred             HHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc--ccccccccccc
Confidence            44555555555555544445688999999999999987 8999999999999999999999999999  89999999999


Q ss_pred             CCCCCC
Q 026252          234 KPDPLC  239 (241)
Q Consensus       234 KP~p~~  239 (241)
                      ||.|++
T Consensus       148 k~~p~~  153 (228)
T d2hcfa1         148 NELPHI  153 (228)
T ss_dssp             GGHHHH
T ss_pred             cchhHH
Confidence            998765

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.75  E-value=3.8e-19  Score=142.37  Aligned_cols=63  Identities=17%  Similarity=0.132  Sum_probs=59.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+ +|++++++||+....+..+++.+|+.++|+  .++++++++..||+|++|
T Consensus        99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~~~~KP~~~~~  161 (230)
T d1x42a1          99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD--SITTSEEAGFFKPHPRIF  161 (230)
T ss_dssp             CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS--EEEEHHHHTBCTTSHHHH
T ss_pred             CcccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc--cccccccccccchhhHHH
Confidence            688999999999997 479999999999999999999999999999  899999999999999876

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.72  E-value=3.7e-18  Score=134.35  Aligned_cols=140  Identities=17%  Similarity=0.179  Sum_probs=99.8

Q ss_pred             CCCCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHHhcCCCCCCCCCHHHHHH
Q 026252           74 SVLPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPEKAPSDEEERKQ  153 (241)
Q Consensus        74 ~~~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (241)
                      |..||+|+||+||||+|+... +..+|+++++++|.+.. ..+.+..+  .+..........          .......+
T Consensus         1 M~~ik~VifD~DGTL~ds~~~-~~~a~~~~~~~~g~~~~-~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~~   66 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIG-IHNAFTYTFKELGVPSP-DAKTIRGF--MGPPLESSFATC----------LSKDQISE   66 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHH-HHHHHHHHHHHHTCCCC-CHHHHHHT--SSSCHHHHHHTT----------SCGGGHHH
T ss_pred             CCCCCEEEEeCCCccccCHHH-HHHHHHHHHHHCCCCCC-CHHHHHHh--hhcchhhhcccc----------ccchhhHH
Confidence            467999999999999999985 78899999999988754 34555443  444443333221          12223333


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCC
Q 026252          154 FIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRK  233 (241)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~  233 (241)
                      ..+.+...    +.... .....++||+.++|+.|+.+ ++++++||+....++..++.+|+..+|+  .++++++.+.+
T Consensus        67 ~~~~~~~~----~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd--~v~~~~~~~~~  138 (210)
T d2ah5a1          67 AVQIYRSY----YKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFD--GIYGSSPEAPH  138 (210)
T ss_dssp             HHHHHHHH----HHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCS--EEEEECSSCCS
T ss_pred             HHHHHHHH----HHhhh-hhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccc--ccccccccccc
Confidence            33333322    22211 22468899999999999876 6999999999999999999999999999  78888886544


Q ss_pred             CC
Q 026252          234 KP  235 (241)
Q Consensus       234 KP  235 (241)
                      ||
T Consensus       139 ~p  140 (210)
T d2ah5a1         139 KA  140 (210)
T ss_dssp             HH
T ss_pred             cc
Confidence            44

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=1.7e-17  Score=131.65  Aligned_cols=144  Identities=20%  Similarity=0.252  Sum_probs=100.4

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHhhcCCCCCCHHHHHHHHHhCCchHHHHHHHH-hcCCCCCCCCCHHHHHHH
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKEKELGVTWDVDLYGELLKIGGGKERMTAYFN-KTGWPEKAPSDEEERKQF  154 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  154 (241)
                      .+|+||||+||||+|+++. +..+|+++++++|++.+  .+++... ..+.....+...+. ..+.+    ...+..   
T Consensus         1 ~~kaviFD~DGtL~dt~~~-~~~a~~~~~~~~g~~~~--~~~~~~~-~~g~~~~~~~~~~~~~~~~~----~~~~~~---   69 (222)
T d2fdra1           1 GFDLIIFDCDGVLVDSEII-AAQVESRLLTEAGYPIS--VEEMGER-FAGMTWKNILLQVESEASIP----LSASLL---   69 (222)
T ss_dssp             CCSEEEECSBTTTBCCHHH-HHHHHHHHHHHTTCCCC--HHHHHHH-HTTCCHHHHHHHHHHHHCCC----CCTHHH---
T ss_pred             CceEEEECCCCcccCCHHH-HHHHHHHHHHHcCCCCC--HHHHHHH-Hhhhcccccccccccccccc----ccccch---
Confidence            3799999999999999985 88899999999988754  3444333 35666666655433 33321    222222   


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCC--CCC
Q 026252          155 IASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV--VPR  232 (241)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~--~~~  232 (241)
                       +....    .+....... ..++||+.++|+.|+.   +.+++||+....+...++++++..+|+. .++++++  .+.
T Consensus        70 -~~~~~----~~~~~~~~~-~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~~~~  139 (222)
T d2fdra1          70 -DKSEK----LLDMRLERD-VKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLGADR  139 (222)
T ss_dssp             -HHHHH----HHHHHHHHH-CCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHCTTC
T ss_pred             -hHHHH----HHHHHhhhc-cchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccce-eecccccccccc
Confidence             22222    222222222 7899999999998864   5689999999999999999999999984 3455553  467


Q ss_pred             CCCCCCCC
Q 026252          233 KKPDPLCC  240 (241)
Q Consensus       233 ~KP~p~~f  240 (241)
                      .||+|++|
T Consensus       140 ~KP~~~~~  147 (222)
T d2fdra1         140 VKPKPDIF  147 (222)
T ss_dssp             CTTSSHHH
T ss_pred             cccCHHHH
Confidence            89999876

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.63  E-value=1.1e-16  Score=128.36  Aligned_cols=63  Identities=19%  Similarity=0.170  Sum_probs=58.4

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ...++||+.++|++|+  |+.++++||+....+...++.+++..+|+  .++++++++..||+|++|
T Consensus        91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd--~v~~s~~~~~~KP~p~~f  153 (245)
T d1qq5a_          91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFD--AVISVDAKRVFKPHPDSY  153 (245)
T ss_dssp             SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEEGGGGTCCTTSHHHH
T ss_pred             ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccc--cccccccccccCccHHHH
Confidence            3688999999999986  68999999999999999999999999999  899999999999999987

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.63  E-value=9.5e-16  Score=120.94  Aligned_cols=64  Identities=22%  Similarity=0.267  Sum_probs=60.9

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++|++.++++.|+++|++++++||+....++..++..++..+|+  .++++++++..||+|++|
T Consensus        92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd--~~~~s~~~~~~KP~p~~~  155 (220)
T d1zrna_          92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD--HLLSVDPVQVYKPDNRVY  155 (220)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS--EEEESGGGTCCTTSHHHH
T ss_pred             ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc--ceeeeeeeeccccHHHHH
Confidence            6789999999999999999999999999999999999999999999  899999999999999876

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=6.1e-16  Score=123.61  Aligned_cols=66  Identities=15%  Similarity=0.007  Sum_probs=56.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ...++||+.++|++|+++|++++|+||+....+...++..++.++|+. .+...++.+..||+|++|
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~KP~p~~~  190 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-VDGHFDTKIGHKVESESY  190 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-CSEEECGGGCCTTCHHHH
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhh-cceeeccccccCCCcHHH
Confidence            357899999999999999999999999999999999999998888874 234445667899999876

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.9e-15  Score=117.62  Aligned_cols=64  Identities=11%  Similarity=-0.016  Sum_probs=53.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHH----HHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEK----AVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~----~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|..|+++|++++++||....    .........++.++|+  .++++++++.+||+|++|
T Consensus        98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd--~i~~s~~~~~~KP~~~~~  165 (225)
T d1zd3a1          98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFD--FLIESCQVGMVKPEPQIY  165 (225)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSS--EEEEHHHHTCCTTCHHHH
T ss_pred             CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhcc--EEEeccccccchhHHHHH
Confidence            688999999999999999999999997443    3334444556778998  899999999999999876

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=2.1e-16  Score=124.87  Aligned_cols=64  Identities=11%  Similarity=0.092  Sum_probs=56.2

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCC----cHHHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTS----NEKAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~----~~~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++++||+    ........+...++.+||+  .++++++++..||+|++|
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd--~i~~s~~~~~~KP~p~~~  163 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFD--FLIESCQVGMIKPEPQIY  163 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCS--EEEEHHHHSCCTTCHHHH
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhc--eeeehhhccCCCCChHHH
Confidence            678999999999999999999999985    3445666677788899999  899999999999999876

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=1.2e-13  Score=105.68  Aligned_cols=65  Identities=23%  Similarity=0.307  Sum_probs=56.8

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh-cCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL-LGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l-~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ...+++|+.+++..++++|++++++||+........+..+ ++.++|+  .++++++.+..||+|++|
T Consensus        82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd--~v~~s~~~~~~Kp~~~~~  147 (197)
T d2b0ca1          82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAAD--HIYLSQDLGMRKPEARIY  147 (197)
T ss_dssp             EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCS--EEEEHHHHTCCTTCHHHH
T ss_pred             ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhcc--ceeecccccccccchHHH
Confidence            3578999999999999999999999999777777666765 6778898  899999999999999876

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=7.2e-12  Score=98.92  Aligned_cols=45  Identities=27%  Similarity=0.327  Sum_probs=41.6

Q ss_pred             cCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          173 KLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       173 ~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ..+.++||+.++|+.|+++|++++|+|++....++.+++.+|+..
T Consensus        79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~  123 (217)
T d1nnla_          79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPA  123 (217)
T ss_dssp             SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCG
T ss_pred             hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcc
Confidence            447899999999999999999999999999999999999998764

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=9.3e-13  Score=99.66  Aligned_cols=59  Identities=17%  Similarity=0.144  Sum_probs=46.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcH-HHHHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNE-KAVTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~-~~~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..++||+.++|+.|+++|++++|+||+.+ ......++.+++..+|.  .+..     ..||+|++|
T Consensus        45 ~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--~~~~-----~~kp~~~~~  104 (164)
T d1u7pa_          45 IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--QREI-----YPGSKVTHF  104 (164)
T ss_dssp             ECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--EEEE-----SSSCHHHHH
T ss_pred             cccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--eeec-----ccCCChHHH
Confidence            68999999999999999999999998765 45677788888887776  4433     356766543

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.22  E-value=4.9e-11  Score=93.84  Aligned_cols=45  Identities=16%  Similarity=0.184  Sum_probs=42.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      .+++||+.++|+.|+++|++++++||+.+..++.+++++++.++|
T Consensus        74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~  118 (226)
T d2feaa1          74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRI  118 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGE
T ss_pred             cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccce
Confidence            689999999999999999999999999999999999999887766

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=98.96  E-value=5.8e-10  Score=83.77  Aligned_cols=64  Identities=16%  Similarity=0.156  Sum_probs=44.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc--------H-------HHHHHHHHHhcCCC---CcccceEEecCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN--------E-------KAVTAIVSFLLGPE---RAEKIQIFAGDVVPRKKPD  236 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~--------~-------~~~~~~l~~l~~~~---~f~~~~iv~s~~~~~~KP~  236 (241)
                      +.++||+.++|+.|+++|++++++||.+        +       ......+...++..   +|.  ..+..++...+||+
T Consensus        29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~--~~~~~~~~~~~KP~  106 (161)
T d2fpwa1          29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLIC--PHLPADECDCRKPK  106 (161)
T ss_dssp             CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE--CCCGGGCCSSSTTS
T ss_pred             ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeec--cccccccccccccc
Confidence            6789999999999999999999999964        1       22334444444321   121  12344566788999


Q ss_pred             CCCC
Q 026252          237 PLCC  240 (241)
Q Consensus       237 p~~f  240 (241)
                      |.+|
T Consensus       107 p~~~  110 (161)
T d2fpwa1         107 VKLV  110 (161)
T ss_dssp             SGGG
T ss_pred             cHHH
Confidence            9986

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=3.7e-10  Score=87.99  Aligned_cols=59  Identities=17%  Similarity=0.174  Sum_probs=42.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-----------HHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIV-----------SFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l-----------~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ..+++++.+++.    .+..+++.|+........+.           +.+++.++|+  .++++++ ...||+|++|
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd--~v~~~~~-~~~KP~p~~f  165 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID--GYFDINT-SGKKTETQSY  165 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC--EEECHHH-HCCTTCHHHH
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccc--eeeeccc-cCCCCChhHh
Confidence            456777776654    35678899998766555443           4457778898  7787765 5579999887

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.71  E-value=1.9e-08  Score=76.93  Aligned_cols=46  Identities=24%  Similarity=0.140  Sum_probs=42.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      ..+++|+.++++.|+.+|..++++|+..........+..+...++.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA  119 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh
Confidence            6899999999999999999999999999999999999887777665

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=98.64  E-value=1.6e-08  Score=78.93  Aligned_cols=28  Identities=29%  Similarity=0.443  Sum_probs=25.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN  202 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~  202 (241)
                      ++++||+.|+|++|+++|++++|+||..
T Consensus        47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~   74 (209)
T d2o2xa1          47 IVLRPQMLPAIATANRAGIPVVVVTNQS   74 (209)
T ss_dssp             CCBCGGGHHHHHHHHHHTCCEEEEEECH
T ss_pred             eEecccHHHHHHHHHhhCCeEEEecccc
Confidence            5789999999999999999999999953

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=98.63  E-value=5.3e-08  Score=74.09  Aligned_cols=28  Identities=14%  Similarity=0.287  Sum_probs=26.4

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN  202 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~  202 (241)
                      ++++||+.++|+.|+++|++++++||..
T Consensus        26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~   53 (182)
T d2gmwa1          26 FEFIDGVIDAMRELKKMGFALVVVTNQS   53 (182)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             eeECCCHHHHHHHHhhcCchhhhhhccc
Confidence            5789999999999999999999999986

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.47  E-value=3.3e-08  Score=72.35  Aligned_cols=28  Identities=21%  Similarity=0.188  Sum_probs=26.1

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN  202 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~  202 (241)
                      ..++||+.++|+.|+++|++++++||..
T Consensus        35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~   62 (149)
T d1ltqa1          35 DVINPMVVELSKMYALMGYQIVVVSGRE   62 (149)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred             CccCHHHHHHHHHHHhccCeEEEEecCc
Confidence            4789999999999999999999999975

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.42  E-value=5e-08  Score=82.81  Aligned_cols=64  Identities=16%  Similarity=0.086  Sum_probs=56.4

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcccceEEecCC-----------CCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAEKIQIFAGDV-----------VPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~~~~iv~s~~-----------~~~~KP~p~~f  240 (241)
                      ++||+.++|+.|+++|++++++||.....++.+++.+|+.++|+...++++++           ....||+|++|
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~  290 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSY  290 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHH
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHH
Confidence            56799999999999999999999999999999999999999998666776654           36789999764

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=4.7e-06  Score=67.67  Aligned_cols=47  Identities=11%  Similarity=0.154  Sum_probs=42.0

Q ss_pred             HHhcCCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCC
Q 026252          170 IEKKLLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGP  216 (241)
Q Consensus       170 ~~~~~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~  216 (241)
                      ..+..+.+.||+.++++.|+++|++++|+|++-...++.+++.+|..
T Consensus       129 v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~  175 (291)
T d2bdua1         129 VADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY  175 (291)
T ss_dssp             HHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             HHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCC
Confidence            33445899999999999999999999999999999999999999754

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.22  E-value=1.7e-06  Score=68.62  Aligned_cols=38  Identities=13%  Similarity=0.253  Sum_probs=23.6

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHHhcCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIVSFLLGP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l~~l~~~  216 (241)
                      |++.++|+.|+++|+++.++||+.   +..+...+..+|+.
T Consensus        22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~   62 (250)
T d2c4na1          22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD   62 (250)
T ss_dssp             TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred             ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence            445566667777788888888763   34444445555543

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.05  E-value=5.4e-06  Score=65.76  Aligned_cols=38  Identities=11%  Similarity=0.166  Sum_probs=25.0

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCC---cHHHHHHHHHHhcCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTS---NEKAVTAIVSFLLGP  216 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~---~~~~~~~~l~~l~~~  216 (241)
                      |++.++|+.|+++|+++.++||+   +.......+..+|..
T Consensus        26 ~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~   66 (261)
T d1vjra_          26 PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD   66 (261)
T ss_dssp             TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred             chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccc
Confidence            56667777788888888888876   344444555555543

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=6.8e-06  Score=65.21  Aligned_cols=42  Identities=21%  Similarity=0.252  Sum_probs=34.0

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      |.+.++|++|+++|++++++|+.+...+..+++.+++...+.
T Consensus        24 ~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~   65 (271)
T d1rkqa_          24 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGD   65 (271)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTC
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCc
Confidence            444577888999999999999999888999999887655444

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.84  E-value=2.2e-05  Score=61.86  Aligned_cols=24  Identities=13%  Similarity=0.336  Sum_probs=18.8

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCc
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSN  202 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~  202 (241)
                      |++.++|++|++.|+++.++||+.
T Consensus        21 ~~a~~~i~~l~~~g~~~~~~Tn~s   44 (253)
T d1yv9a1          21 PAGKRFVERLQEKDLPFLFVTNNT   44 (253)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             ccHHHHHHHHHHCCCCEEEEeCCC
Confidence            455577788888899999999864

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.81  E-value=3e-05  Score=58.24  Aligned_cols=46  Identities=15%  Similarity=0.067  Sum_probs=37.2

Q ss_pred             CCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          174 LLPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       174 ~~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      .....++....+..++ .+++.+++|++...........++....+.
T Consensus        67 ~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  112 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLC  112 (206)
T ss_dssp             TCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEE
T ss_pred             hccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhc
Confidence            3788899988888765 679999999998888888888886665543

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.72  E-value=4.8e-05  Score=58.18  Aligned_cols=36  Identities=11%  Similarity=0.111  Sum_probs=28.0

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      .+.|++|+++|++++++|+.+...+...+...+...
T Consensus        25 ~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~   60 (230)
T d1wr8a_          25 LEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG   60 (230)
T ss_dssp             HHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCc
Confidence            366667888899999999998888888877775543

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.72  E-value=2.8e-05  Score=59.98  Aligned_cols=38  Identities=26%  Similarity=0.166  Sum_probs=29.3

Q ss_pred             hHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          180 GVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       180 gv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ++.+.|+.|+++|++++++|+.+...+..+...++...
T Consensus        24 ~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~   61 (225)
T d1l6ra_          24 KAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING   61 (225)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc
Confidence            34456678888999999999988887788877776543

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=97.65  E-value=5.2e-05  Score=59.72  Aligned_cols=23  Identities=9%  Similarity=0.276  Sum_probs=16.9

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTS  201 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~  201 (241)
                      |++.++|+.|+++|++++++||+
T Consensus        21 ~~a~e~l~~l~~~g~~~~~~TN~   43 (253)
T d1wvia_          21 PAGEDFVKRLQERQLPYILVTNN   43 (253)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ccHHHHHHHHHHCCCCEEEEeCC
Confidence            55556677777778888888876

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=6.3e-05  Score=57.59  Aligned_cols=42  Identities=14%  Similarity=0.177  Sum_probs=32.5

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHH-HHhcCC
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---EKAVTAIV-SFLLGP  216 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---~~~~~~~l-~~l~~~  216 (241)
                      ..+.||+.++++.++++|++|..|||..   ++.+...| +.+|+.
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p  130 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP  130 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCC
Confidence            4577999999999999999999999974   34444555 446654

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.56  E-value=8.3e-05  Score=59.01  Aligned_cols=39  Identities=21%  Similarity=0.127  Sum_probs=31.8

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.+.+.|++|+++|++++++|+.+...+..+++.+++..
T Consensus        21 ~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~   59 (285)
T d1nrwa_          21 LENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT   59 (285)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCc
Confidence            445577788889999999999998888888888886543

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=97.52  E-value=0.00021  Score=50.15  Aligned_cols=48  Identities=13%  Similarity=0.152  Sum_probs=36.8

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCc---------------HHHHHHHHHHhcCCCCcccceEEe
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSN---------------EKAVTAIVSFLLGPERAEKIQIFA  226 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~---------------~~~~~~~l~~l~~~~~f~~~~iv~  226 (241)
                      ..+.+++.+.|..|++.|+.+.+.|...               .+.+...|+..|+ .| +  .++.
T Consensus        23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI-~Y-d--~Li~   85 (124)
T d1xpja_          23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQV-PY-D--EILV   85 (124)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTC-CC-S--EEEE
T ss_pred             cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCC-Cc-e--EEEE
Confidence            3677999999999999999999999873               3456667777766 44 4  4554

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00026  Score=53.33  Aligned_cols=28  Identities=18%  Similarity=0.367  Sum_probs=23.6

Q ss_pred             CCCChhHHHHHHHHHHCC-CeEEEEeCCc
Q 026252          175 LPLRPGVAKLIDQALEKG-VKVAVCSTSN  202 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~g-i~v~ivTn~~  202 (241)
                      ++++||+.|+|++|++.| +.+.++|...
T Consensus        73 L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          73 LEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             CCcccCHHHHHHHHhhccCccceEEcccc
Confidence            789999999999999865 4677888863

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.42  E-value=0.00013  Score=56.19  Aligned_cols=35  Identities=11%  Similarity=0.082  Sum_probs=30.3

Q ss_pred             HHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          183 KLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       183 elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.|++|+++|++++++|+.+...+..+++.++...
T Consensus        24 ~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~   58 (243)
T d1wzca1          24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET   58 (243)
T ss_dssp             HHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence            55678889999999999999999999999987653

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00042  Score=52.64  Aligned_cols=37  Identities=19%  Similarity=0.182  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       181 v~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      +.++|++|+++|++++++|+.+...+...++.+++..
T Consensus        26 ~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~   62 (232)
T d1xvia_          26 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   62 (232)
T ss_dssp             THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence            3467788899999999999999999999999887643

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.21  E-value=0.00028  Score=55.54  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=29.9

Q ss_pred             hhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          179 PGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       179 pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      |.+.+.|++|+++|++++++|+.+...+..+++.++.
T Consensus        31 ~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~   67 (283)
T d2b30a1          31 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL   67 (283)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            4455777888889999999999998888888776643

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00012  Score=57.56  Aligned_cols=35  Identities=14%  Similarity=0.159  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcC
Q 026252          181 VAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLG  215 (241)
Q Consensus       181 v~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~  215 (241)
                      +.+.|++|+++|++++++|+.+...+...++.++.
T Consensus        25 ~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~   59 (269)
T d1rlma_          25 FMAQYQELKKRGIKFVVASGNQYYQLISFFPELKD   59 (269)
T ss_dssp             HHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTT
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence            44667777888888888888877777666665543

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=96.94  E-value=0.00034  Score=54.82  Aligned_cols=30  Identities=13%  Similarity=0.321  Sum_probs=21.4

Q ss_pred             HHHHHHHHHCCCeEEEEeCCcHHHHHHHHH
Q 026252          182 AKLIDQALEKGVKVAVCSTSNEKAVTAIVS  211 (241)
Q Consensus       182 ~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~  211 (241)
                      .+.|++|+++|++++++|+.+...+..+.+
T Consensus        25 ~~al~~l~~~gi~v~~~TGR~~~~~~~l~~   54 (260)
T d2rbka1          25 IEALEAAHAKGLKIFIATGRPKAIINNLSE   54 (260)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCGGGCCSCHH
T ss_pred             HHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence            366777888899999999876565554433

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.00058  Score=52.07  Aligned_cols=30  Identities=27%  Similarity=0.462  Sum_probs=20.6

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHh
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      .+|.|+||+||||++.... ..+...+++++
T Consensus         2 ~~kl~~fDlDGTLl~~~~~-i~~~~~~al~~   31 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQK-ITKEMDDFLQK   31 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSC-CCHHHHHHHHH
T ss_pred             CCEEEEEcCcCCeeCCCCc-CCHHHHHHHHH
Confidence            4699999999999987654 33334444444

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.45  E-value=0.0021  Score=45.55  Aligned_cols=44  Identities=18%  Similarity=0.147  Sum_probs=39.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCc
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERA  219 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f  219 (241)
                      ++.|++.+.|+.|++.|+++.++|+.....+..+-+.+|+..+|
T Consensus        21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~   64 (135)
T d2b8ea1          21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI   64 (135)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE
T ss_pred             CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc
Confidence            57899999999999999999999999999999999999875443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.27  E-value=0.002  Score=48.54  Aligned_cols=60  Identities=20%  Similarity=0.260  Sum_probs=42.7

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEeCC--------cHHH----HHHHHHHhcCCCCcccceEEecCCCCCCCCCCCCC
Q 026252          177 LRPGVAKLIDQALEKGVKVAVCSTS--------NEKA----VTAIVSFLLGPERAEKIQIFAGDVVPRKKPDPLCC  240 (241)
Q Consensus       177 l~pgv~elL~~Lk~~gi~v~ivTn~--------~~~~----~~~~l~~l~~~~~f~~~~iv~s~~~~~~KP~p~~f  240 (241)
                      ++|++.+.|+.|.++|+.++|+||.        +.+.    ...+++.++..  +.  ..++...-..+||.|.|+
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~--i~~~~~~~~~RKP~~GM~  122 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQ--VLVATHAGLNRKPVSGMW  122 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CE--EEEECSSSSSSTTSTHHH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--cc--EEEecCccccCCCccHHH
Confidence            5799999999999999999999996        3322    44555555432  22  345555557899998653

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.93  E-value=0.0017  Score=50.84  Aligned_cols=30  Identities=17%  Similarity=0.321  Sum_probs=20.9

Q ss_pred             CCcEEEEecCcccccCccchHHHHHHHHHHh
Q 026252           76 LPSALLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        76 ~~k~ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      |+|.|+||+||||++.... +.....+++++
T Consensus         1 m~Kli~~DlDGTL~~~~~~-i~~~~~~al~~   30 (267)
T d1nf2a_           1 MYRVFVFDLDGTLLNDNLE-ISEKDRRNIEK   30 (267)
T ss_dssp             CBCEEEEECCCCCSCTTSC-CCHHHHHHHHH
T ss_pred             CeEEEEEeCCccccCCcCc-cCHHHHHHHHH
Confidence            6899999999999987654 33334444444

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.23  E-value=0.017  Score=42.20  Aligned_cols=42  Identities=21%  Similarity=0.198  Sum_probs=39.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPE  217 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~  217 (241)
                      ++.||+.+.|+.|++.|+++.++|+.+...+..+-+.+|+..
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~   61 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG   61 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSC
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999999998754

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0043  Score=46.81  Aligned_cols=26  Identities=23%  Similarity=0.372  Sum_probs=16.9

Q ss_pred             EEEecCcccccCccchHHHHHHHHHHh
Q 026252           80 LLFDCDGVLVDTEKDGHRISFNDTFKE  106 (241)
Q Consensus        80 ViFD~DGTLvd~~~~~~~~a~~~~~~~  106 (241)
                      ++||+||||++.... +.....+++++
T Consensus         4 ~lFDlDGTLl~~~~~-is~~~~~~i~~   29 (244)
T d2fuea1           4 CLFDVDGTLTPARQK-IDPEVAAFLQK   29 (244)
T ss_dssp             EEEESBTTTBSTTSC-CCHHHHHHHHH
T ss_pred             EEEccccCccCCCCc-CCHHHHHHHHH
Confidence            468999999998764 33334444443

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=94.76  E-value=0.036  Score=38.09  Aligned_cols=61  Identities=7%  Similarity=-0.158  Sum_probs=40.6

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHH---HHHHhcCCCCcccceE-------EecCCCCCCCCCCCCC
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTA---IVSFLLGPERAEKIQI-------FAGDVVPRKKPDPLCC  240 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~---~l~~l~~~~~f~~~~i-------v~s~~~~~~KP~p~~f  240 (241)
                      ++.|++.+.|+.|+++|+.+.+.|.........   .|+..|+ ++ +  .+       +--.++..+||..++|
T Consensus        21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i-~y-d--~i~~~~~~~~~~~~~~~~Kp~ad~y   91 (122)
T d2obba1          21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL-EF-Y--AANKDYPEEERDHQGFSRKLKADLF   91 (122)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC-CC-S--EESSSSTTC---CCSCCSSCCCSEE
T ss_pred             cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCC-Cc-e--ehhccCccCccccceecCCccccEE
Confidence            567999999999999999999999986554443   4444433 22 2  11       1223456679988765

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=93.97  E-value=0.024  Score=47.83  Aligned_cols=50  Identities=10%  Similarity=0.038  Sum_probs=42.0

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHh---------cCCCCcccceEEec
Q 026252          176 PLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFL---------LGPERAEKIQIFAG  227 (241)
Q Consensus       176 ~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l---------~~~~~f~~~~iv~s  227 (241)
                      ..-|.+..+|.+||+.|.++.++||+.-..+...++.+         .+.++||  .||+.
T Consensus       185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFD--vVIv~  243 (458)
T d2bdea1         185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFE--FVITL  243 (458)
T ss_dssp             ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEE--EEEES
T ss_pred             cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhce--EEEeC
Confidence            44689999999999999999999999999999888864         3456888  66664

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.04  E-value=0.021  Score=42.55  Aligned_cols=12  Identities=42%  Similarity=0.772  Sum_probs=10.9

Q ss_pred             EEEEecCccccc
Q 026252           79 ALLFDCDGVLVD   90 (241)
Q Consensus        79 ~ViFD~DGTLvd   90 (241)
                      .|+||+||||++
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            689999999997

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=92.04  E-value=0.044  Score=41.52  Aligned_cols=16  Identities=25%  Similarity=0.314  Sum_probs=13.1

Q ss_pred             cEEEEecCcccccCcc
Q 026252           78 SALLFDCDGVLVDTEK   93 (241)
Q Consensus        78 k~ViFD~DGTLvd~~~   93 (241)
                      ..|+||+||||++...
T Consensus         4 ~li~~DlDGTL~~~~~   19 (244)
T d1s2oa1           4 LLLISDLDNTWVGDQQ   19 (244)
T ss_dssp             EEEEECTBTTTBSCHH
T ss_pred             eEEEEECcccCCCCCC
Confidence            4677899999998765

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=91.37  E-value=0.038  Score=40.55  Aligned_cols=17  Identities=35%  Similarity=0.388  Sum_probs=14.9

Q ss_pred             CCCcEEEEecCcccccC
Q 026252           75 VLPSALLFDCDGVLVDT   91 (241)
Q Consensus        75 ~~~k~ViFD~DGTLvd~   91 (241)
                      ..+|+++||+||||+|.
T Consensus         3 ~~ik~~i~DvDGVlTDG   19 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTDG   19 (177)
T ss_dssp             GGCCEEEEECTTTTSCS
T ss_pred             ccCeEEEEccCCcccCC
Confidence            35899999999999985

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.02  E-value=0.17  Score=36.94  Aligned_cols=45  Identities=16%  Similarity=0.132  Sum_probs=39.7

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhcCCCCcc
Q 026252          175 LPLRPGVAKLIDQALEKGVKVAVCSTSNEKAVTAIVSFLLGPERAE  220 (241)
Q Consensus       175 ~~l~pgv~elL~~Lk~~gi~v~ivTn~~~~~~~~~l~~l~~~~~f~  220 (241)
                      ...+||+.++|+.+.+. +.++|.|.+.+..+..+++.++-...+.
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~   98 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFR   98 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEE
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCcee
Confidence            46789999999999886 9999999999999999999997655554

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=90.56  E-value=0.075  Score=43.62  Aligned_cols=17  Identities=41%  Similarity=0.804  Sum_probs=15.5

Q ss_pred             CcEEEEecCcccccCcc
Q 026252           77 PSALLFDCDGVLVDTEK   93 (241)
Q Consensus        77 ~k~ViFD~DGTLvd~~~   93 (241)
                      +|.|+||+||||++.+.
T Consensus         1 ~~~i~fd~dGVll~~~~   17 (380)
T d1qyia_           1 MKKILFDVDGVFLSEER   17 (380)
T ss_dssp             CCEEEECSBTTTBCSHH
T ss_pred             CceEEEeCCcEEEccee
Confidence            48899999999999887

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=82.88  E-value=0.24  Score=33.70  Aligned_cols=14  Identities=29%  Similarity=0.631  Sum_probs=11.3

Q ss_pred             EEEEecCcccccCc
Q 026252           79 ALLFDCDGVLVDTE   92 (241)
Q Consensus        79 ~ViFD~DGTLvd~~   92 (241)
                      .|+||+||||....
T Consensus         2 ti~vDiDGTl~~~~   15 (122)
T d2obba1           2 TIAVDFDGTIVEHR   15 (122)
T ss_dssp             EEEECCBTTTBCSC
T ss_pred             EEEEEcCCCcCCCC
Confidence            47899999998643