Citrus Sinensis ID: 026297

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MAFVQNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSDP
Secondary Structure (PSIPRED)
ccccccccccccccEEEEEEEEccEEEEccccccccccEEEEEEEEccccccccccEEEEEEEEccccccccEEEEccccEEEEccEEEEEEEEEEEEEcccccccEEEEEEEEccccccccccccccccEEEEccEEEcccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEEEEEEEEEEcEEEEcccccccccccEEEEEEEccccccHHHHEEEEEEEEccccccccEEEEcccEEEEEcccEEEEEEEEEEEEcccccccEEEEEEEEEccccccccccccccEEEEEEEEEEcccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccc
Coil and Loop (DISEMBL)
MAFVQNLNKKLKDVEISIPIVYGNVAFWLGKKaseyqshkwTVYVRGATNEDLGVVIKRAVFQLhssfnnptravesppfelsesgwgEFEIAITLYFHadvcdkplnlyhhlklypedesgsmstkkpvvvesydeivfpepsdsflarvqnhpavtlprlpvgftlpppvpiedtskrkrgdtkdhplaQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISlidgqqqqlrstsdp
Flexible Loop (DISEMBL)
MAFVQNLnkklkdveisIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHssfnnptravesppFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLypedesgsmstKKPVVVESYDEIVFPEPSDSFLARVQNHPAvtlprlpvgftlpppvpiedtskrkrgdtKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQIslidgqqqqlrstsdp
Low Complexity Region (SEG)
MAFVQNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADEllqlaaarqqvqaHIAKLKRQISLIDGQQQQLRSTSDP
Disordered region (IsUnstruct)
******LNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN***********ELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP************VVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTL*********************LAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISL**************
Disordered Region (DISOPRED)
*************VEISIPIVYGNVAFWL******YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPED************VESYDEIVFPEPSDSFL********************************************************QLA*********************************
Disordered Region (DISEMBL)
MAFVQNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPE**********PVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLID************
Disordered Region (DISPRO)
******LNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTL***************************DHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQ********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFVQNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADExxxxxxxxxxxxxxxxxxxxxISLIDGQQQQLRSTSDP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	240	2.2.26 [Sep-21-2011]
Q755P0	208	Protein AF-9 homolog OS=A	yes	no	0.633	0.730	0.439	1e-33
P53930	226	Protein AF-9 homolog OS=S	yes	no	0.641	0.681	0.397	4e-31
Q6FXM4	221	Protein AF-9 homolog OS=C	yes	no	0.637	0.692	0.370	1e-29
Q6CIV8	220	Protein AF-9 homolog OS=K	yes	no	0.637	0.695	0.408	3e-29
Q10319	217	Protein AF-9 homolog OS=S	yes	no	0.837	0.926	0.350	4e-29
Q9CR11	227	YEATS domain-containing p	yes	no	0.554	0.585	0.463	2e-26
O95619	227	YEATS domain-containing p	yes	no	0.554	0.585	0.463	2e-26
Q5BC71	275	Protein AF-9 homolog OS=E	yes	no	0.579	0.505	0.417	2e-25
Q4WPM8	252	Protein AF-9 homolog OS=N	yes	no	0.616	0.587	0.374	4e-23
Q6CF24	202	Protein AF-9 homolog OS=Y	yes	no	0.675	0.801	0.325	1e-21

>sp|Q755P0|AF9_ASHGO Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=YAF9 PE=3 SV=1

 Score =  143 bits (360), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 100/157 (63%), Gaps = 5/157 (3%)

Query: 9   KKLKDVEISIPIVYGNVAFWLGKK----ASEYQSHKWTVYVRGATNEDLGVVIKRAVFQL 64
           K++K + ++ PIVYGN A  +G      A    +H WT++VRG   ED+   IK+ VF+L
Sbjct: 7   KRIKTLSVARPIVYGNTAKKMGDVRPAIAPSEHTHMWTIFVRGPQGEDISYFIKKVVFKL 66

Query: 65  HSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP-EDESGS 123
           H ++ NP R V++PPFEL+E+GWGEFEI + ++F  +  +K LN YHHL+L+P  +E G 
Sbjct: 67  HETYPNPVRVVDAPPFELTETGWGEFEINVKVHFVDEANEKMLNFYHHLRLHPYTEEDGR 126

Query: 124 MSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLP 160
            S    V    YDEIVF EP+++F A++   P   LP
Sbjct: 127 RSDGDEVSSVFYDEIVFNEPNEAFFAKMIEQPGNLLP 163

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.
Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|P53930|AF9_YEAST Protein AF-9 homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAF9 PE=1 SV=1

 Score =  134 bits (338), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 17/171 (9%)

Query: 7   LNKKLKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVF 62
           ++K++K + +S PI+YGN A  +G      A    +H WT++VRG  NED+   IK+ VF
Sbjct: 5   ISKRIKTLSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVF 64

Query: 63  QLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP----- 117
           +LH ++ NP R++E+PPFEL+E+GWGEF+I I +YF  +  +K LN YH L+L+P     
Sbjct: 65  KLHDTYPNPVRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPV 124

Query: 118 -------EDESGSMSTKKPVVVESY-DEIVFPEPSDSFLARVQNHPAVTLP 160
                  E  +   ++K   V   Y DEIVF EP++ F   + + P   LP
Sbjct: 125 PNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFFKILMSRPGNLLP 175

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q6FXM4|AF9_CANGA Protein AF-9 homolog OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YAF9 PE=3 SV=1

 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 17/170 (10%)

Query: 8   NKKLKDVEISIPIVYGNVAFWLGKK----ASEYQSHKWTVYVRGATNEDLGVVIKRAVFQ 63
           +K++K + +S  ++YGN A  +G+     A    +H WT++VR  T +D+   IK+ VF+
Sbjct: 6   SKRIKTLSVSRAVIYGNTAKKIGENRPPNAPSEHTHLWTIFVRSPTGDDISYFIKKVVFK 65

Query: 64  LHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP------ 117
           LH ++ NP R +E+PPFEL+E+GWGEF+I I +YF  +  +K +N YH L+L+P      
Sbjct: 66  LHETYPNPVRTIEAPPFELTETGWGEFDINIKIYFVEESNEKFINFYHRLRLHPYVNVNP 125

Query: 118 -------EDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLP 160
                  ++E+G+ +T   +    YDEIVF EP + F   + + P   LP
Sbjct: 126 PMSTEVKKEETGNATTSDEISSIFYDEIVFNEPYEDFFKILVSKPGNLLP 175

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q6CIV8|AF9_KLULA Protein AF-9 homolog OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=YAF9 PE=3 SV=1

 Score =  128 bits (322), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 16/169 (9%)

Query: 7   LNKKLKDVEISIPIVYGNVAFWLGKK----ASEYQSHKWTVYVRGATNEDLGVVIKRAVF 62
           + K++K + ++ PI+YGN A  +G      A +  +H WT++VR    ED+   IK+ VF
Sbjct: 6   VTKRIKTLSVTRPIIYGNTAKKMGDNIPPNAPKDHTHLWTIFVRDPRGEDISYFIKKVVF 65

Query: 63  QLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCD-KPLNLYHHLKLYP---- 117
           +LH ++ NP R +E+PPFEL+E+GWGEFEI I +YF ADV + K LN YHHL+L+P    
Sbjct: 66  KLHETYPNPVRVIEAPPFELTETGWGEFEINIKIYF-ADVSNEKMLNFYHHLRLHPYINP 124

Query: 118 ---EDESGSMSTKKP---VVVESYDEIVFPEPSDSFLARVQNHPAVTLP 160
              E E  +  ++ P   V    +DEIVF EP + F   + + P    P
Sbjct: 125 ETKEIERSNDESEVPEDEVKAVYFDEIVFNEPVEQFFQLLMSKPGNLFP 173

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q10319|AF9_SCHPO Protein AF-9 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yaf9 PE=3 SV=1

 Score =  128 bits (322), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 118/231 (51%), Gaps = 30/231 (12%)

Query: 8   NKKLKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVFQ 63
           N ++   +IS PI+ GN A  L K    KA    +H W ++V G   ED+   +++ VF+
Sbjct: 4   NTRVSKCQISRPILVGNDAKPLTKEEKEKAPTDHTHTWRIFVEGVDGEDISKWVRKVVFK 63

Query: 64  LHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGS 123
           LH ++NNPTR +ESPPFE+ E+GWGEF+I + ++F  +  +K L  YHHLKL+P      
Sbjct: 64  LHDTYNNPTRTIESPPFEVIETGWGEFDIMVRIFFAPEAHEKALTFYHHLKLHPYGPRME 123

Query: 124 MSTKKPVVVES--YDEIVFPEPSD-SFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKR 180
                  +VES  Y+EIVF EP + ++    QN                   PI D    
Sbjct: 124 EMKASGGLVESVQYEEIVFNEPFEYTYKLLSQN-------------------PIGDGHGL 164

Query: 181 KRGDTKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQ 231
                 DHP +Q      E DE  +L  A Q+V+  I   K+Q+  + GQ+
Sbjct: 165 AVESEPDHPFSQQL----EQDEADKLDFAIQEVKKTIEMYKQQVQSLQGQK 211

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9CR11|YETS4_MOUSE YEATS domain-containing protein 4 OS=Mus musculus GN=Yeats4 PE=2 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 3/136 (2%)

Query: 10  KLKDVEISIPIVYGNVAFWLGKKASE-YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
           ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct: 15  RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query: 69  NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
            NP R V  PP+E++E+GWGE    I   F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct: 75  GNPLRVVTKPPYEITETGWGE-FEIIIKIFFIDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query: 129 PVVVESYDEIVFPEPS 144
            VV E YDE++F +P+
Sbjct: 133 TVVSEFYDEMIFQDPT 148

Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage.

Mus musculus (taxid: 10090)

>sp|O95619|YETS4_HUMAN YEATS domain-containing protein 4 OS=Homo sapiens GN=YEATS4 PE=1 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 88/136 (64%), Gaps = 3/136 (2%)

Query: 10  KLKDVEISIPIVYGNVAFWLGKKASE-YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
           ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct: 15  RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query: 69  NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
            NP R V  PP+E++E+GWGE    I   F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct: 75  GNPLRVVTKPPYEITETGWGE-FEIIIKIFFIDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query: 129 PVVVESYDEIVFPEPS 144
            VV E YDE++F +P+
Sbjct: 133 TVVSEFYDEMIFQDPT 148

Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage.

Homo sapiens (taxid: 9606)

>sp|Q5BC71|AF9_EMENI Protein AF-9 homolog OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yaf9 PE=3 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 7/146 (4%)

Query: 9   KKLKDVEISIPIVYGNVA--FWLGKKASEYQS---HKWTVYVRGATNEDLGVVIKRAVFQ 63
           K+++ V I  P V+G+ A  F    K S   S   H+W VYVRG   ED+   IK+  F+
Sbjct: 8   KRVRGVSIFRPFVFGSEAQPFDPATKPSNVSSDHTHQWRVYVRGVNGEDISYWIKKVQFK 67

Query: 64  LHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP--EDES 121
           LH ++    R VE PP+E++E+GWGEFEI I +YF  +  +KP  L+H LKL+P   D  
Sbjct: 68  LHETYVQNVRTVEHPPYEVTETGWGEFEIQIKIYFVPESMEKPQTLWHSLKLHPYGPDAE 127

Query: 122 GSMSTKKPVVVESYDEIVFPEPSDSF 147
           G    ++ VV ++Y+E+VF EP + F
Sbjct: 128 GKKERREVVVSQNYEEVVFNEPVEQF 153

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

>sp|Q4WPM8|AF9_ASPFU Protein AF-9 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=yaf9 PE=3 SV=2

 Score =  108 bits (269), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 90/155 (58%), Gaps = 7/155 (4%)

Query: 9   KKLKDVEISIPIVYGNVA--FWLGKKASEY---QSHKWTVYVRGATNEDLGVVIKRAVFQ 63
           K+++ V I  P V+G+ A  F   KK        +H+W V+V+G  +ED+   +K+  F+
Sbjct: 8   KRVRGVSIFRPFVFGSEARPFDPEKKPPHVPADHTHQWRVFVKGVNDEDISYWLKKVQFK 67

Query: 64  LHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGS 123
           LH ++    R +E PPFE++E+GWGEFEI I LYF  +  +KP  L+H LKL+P      
Sbjct: 68  LHETYAQNVRTIEQPPFEVTETGWGEFEIQIKLYFVPESGEKPQTLWHSLKLHPFGPGAE 127

Query: 124 MSTKKPVVV--ESYDEIVFPEPSDSFLARVQNHPA 156
           +  ++  VV  ++Y+EIVF EP + F   +   P 
Sbjct: 128 VKKERREVVISQNYEEIVFNEPMEPFYDLLTGGPT 162

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q6CF24|AF9_YARLI Protein AF-9 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YAF9 PE=3 SV=1

 Score =  103 bits (257), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 44/206 (21%)

Query: 49  TNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLN 108
           TN +LG  IK+ VF+LH ++ N TR +E PPFE++E+GWGEFEI+I ++F  ++ +K + 
Sbjct: 19  TNHELGF-IKKVVFKLHDTYANSTRTIEEPPFEVTETGWGEFEISIRIFFPTEMGEKNIL 77

Query: 109 LYHHLKLYP--------------------EDESGSMSTKKPVVVESYDEIVFPEPSDSFL 148
           LYHHLKL+P                    EDE  + +  +PV    YDE+VF EPS+   
Sbjct: 78  LYHHLKLHPYKKDNIPAQIGAPGGAPNANEDEENT-NVPQPVDSYVYDELVFNEPSEQMF 136

Query: 149 ARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADELLQLAA 208
             + + P   LP                     + D  D P   + +  +EA+EL +L A
Sbjct: 137 ELLTSRPGALLP--------------------AKSDPND-PSKSYSLQ-TEAEELDRLTA 174

Query: 209 ARQQVQAHIAKLKRQISLIDGQQQQL 234
             + V   + K K  I  ++ +++ L
Sbjct: 175 GLETVYQQVQKTKEYILQLEKEKETL 200

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
224080520	271	predicted protein [Populus trichocarpa]	0.962	0.852	0.904	1e-124
356545002	273	PREDICTED: protein AF-9 homolog [Glycine	0.979	0.860	0.868	1e-121
297744708	246	unnamed protein product [Vitis vinifera]	0.979	0.955	0.851	1e-117
225427812	273	PREDICTED: protein AF-9 homolog [Vitis v	0.979	0.860	0.851	1e-117
224103299	282	predicted protein [Populus trichocarpa]	0.979	0.833	0.764	1e-116
357473621	245	YEATS domain-containing protein [Medicag	0.979	0.959	0.808	1e-115
297794703	268	hypothetical protein ARALYDRAFT_494425 [	0.962	0.861	0.800	1e-112
15242448	268	YEATS family protein [Arabidopsis thalia	0.962	0.861	0.800	1e-112
334188213	267	YEATS family protein [Arabidopsis thalia	0.962	0.865	0.800	1e-112
255543907	227	YEATS domain-containing protein, putativ	0.858	0.907	0.907	1e-110

>gi|224080520|ref|XP_002306148.1| predicted protein [Populus trichocarpa] gi|222849112|gb|EEE86659.1| predicted protein [Populus trichocarpa]

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 209/231 (90%), Positives = 224/231 (96%)

Query: 9   KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
           KKLKDVEIS+PIVYGN+AFWLGKKA+EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF
Sbjct: 41  KKLKDVEISVPIVYGNIAFWLGKKANEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 100

Query: 69  NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
           NNPTR +E+PPFELSE+GWGEFEIAITLYFH+DVCDKPLNLYHHLKLYPEDESGS+S KK
Sbjct: 101 NNPTRVIEAPPFELSEAGWGEFEIAITLYFHSDVCDKPLNLYHHLKLYPEDESGSLSMKK 160

Query: 129 PVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDH 188
           PVVVESYDEIVFPEPS+ FLAR+Q+HPAV LPRLP GFTLPPPVP+EDTSKRKRGDTKDH
Sbjct: 161 PVVVESYDEIVFPEPSEGFLARIQSHPAVNLPRLPSGFTLPPPVPVEDTSKRKRGDTKDH 220

Query: 189 PLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
           PL+QWFMNFSEADELLQLAAARQQVQAHIAKL+RQISLIDGQ QQL+S SD
Sbjct: 221 PLSQWFMNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQNQQLKSPSD 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545002|ref|XP_003540935.1| PREDICTED: protein AF-9 homolog [Glycine max]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/235 (86%), Positives = 221/235 (94%)

Query: 5   QNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQL 64
           +NL KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLG +IK AVFQL
Sbjct: 38  KNLGKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGTIIKHAVFQL 97

Query: 65  HSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSM 124
           HSSFNNPTR VESPPFELSESGWGEFE++ITLYFH+DVCDKPLNLYHHLKLYPEDE+ SM
Sbjct: 98  HSSFNNPTRVVESPPFELSESGWGEFEVSITLYFHSDVCDKPLNLYHHLKLYPEDENSSM 157

Query: 125 STKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGD 184
           STKKPVVVE YDEIVFP+PS++FLARVQNHPAV LPRLP G TLPP +P+ED SKR++GD
Sbjct: 158 STKKPVVVEFYDEIVFPDPSEAFLARVQNHPAVNLPRLPAGLTLPPSIPVEDASKRRKGD 217

Query: 185 TKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
           TKDH L+QWFMNFSEADELLQLAAARQQVQAHIAKL+RQISLIDGQ QQ +S+SD
Sbjct: 218 TKDHSLSQWFMNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSSSD 272

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744708|emb|CBI37970.3| unnamed protein product [Vitis vinifera]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/235 (85%), Positives = 218/235 (92%)

Query: 5   QNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQL 64
           +NLNK+LKDVEIS+PIVYGN+AFWLGKKASEYQSHKWTVYVR  TNEDLGVVIKRAVFQL
Sbjct: 11  KNLNKRLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTVYVRSPTNEDLGVVIKRAVFQL 70

Query: 65  HSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSM 124
           HSSFNNPTR VESPPFELSE+GWGEFEIAITLYF +DVCDKPLNLYHHLKLYPEDESG M
Sbjct: 71  HSSFNNPTRVVESPPFELSEAGWGEFEIAITLYFQSDVCDKPLNLYHHLKLYPEDESGPM 130

Query: 125 STKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGD 184
           S KKPVVVESYDEIVF EPS+ F ARVQNHPAV +PRLP GF+LPPPVP+ED +++KR D
Sbjct: 131 SAKKPVVVESYDEIVFSEPSEGFFARVQNHPAVIVPRLPAGFSLPPPVPLEDVNEKKRFD 190

Query: 185 TKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
           +KD+PL QWF NFSEADELLQLAAARQQVQAHIAKL+RQIS+IDGQ QQL+ TSD
Sbjct: 191 SKDNPLNQWFKNFSEADELLQLAAARQQVQAHIAKLRRQISVIDGQHQQLKPTSD 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427812|ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinifera]

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 200/235 (85%), Positives = 218/235 (92%)

Query: 5   QNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQL 64
           +NLNK+LKDVEIS+PIVYGN+AFWLGKKASEYQSHKWTVYVR  TNEDLGVVIKRAVFQL
Sbjct: 38  KNLNKRLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTVYVRSPTNEDLGVVIKRAVFQL 97

Query: 65  HSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSM 124
           HSSFNNPTR VESPPFELSE+GWGEFEIAITLYF +DVCDKPLNLYHHLKLYPEDESG M
Sbjct: 98  HSSFNNPTRVVESPPFELSEAGWGEFEIAITLYFQSDVCDKPLNLYHHLKLYPEDESGPM 157

Query: 125 STKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGD 184
           S KKPVVVESYDEIVF EPS+ F ARVQNHPAV +PRLP GF+LPPPVP+ED +++KR D
Sbjct: 158 SAKKPVVVESYDEIVFSEPSEGFFARVQNHPAVIVPRLPAGFSLPPPVPLEDVNEKKRFD 217

Query: 185 TKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
           +KD+PL QWF NFSEADELLQLAAARQQVQAHIAKL+RQIS+IDGQ QQL+ TSD
Sbjct: 218 SKDNPLNQWFKNFSEADELLQLAAARQQVQAHIAKLRRQISVIDGQHQQLKPTSD 272

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103299|ref|XP_002313001.1| predicted protein [Populus trichocarpa] gi|222849409|gb|EEE86956.1| predicted protein [Populus trichocarpa]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 204/267 (76%), Positives = 223/267 (83%), Gaps = 32/267 (11%)

Query: 5   QNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQL 64
           Q LNKKLKDVEISIPIVYGN+AFWLGKK++EYQSHKWT+YVRGATNEDLGVVIKRAVFQL
Sbjct: 15  QILNKKLKDVEISIPIVYGNIAFWLGKKSNEYQSHKWTIYVRGATNEDLGVVIKRAVFQL 74

Query: 65  HSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNL--------------- 109
           HSSFNNPTR +E+PPFELSE+GWGEFEIAITLYFH+DVCDKPLNL               
Sbjct: 75  HSSFNNPTRVIEAPPFELSEAGWGEFEIAITLYFHSDVCDKPLNLKILLSFIFFSSLCMI 134

Query: 110 -----------------YHHLKLYPEDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQ 152
                            YHHLKLYPEDE G +S KKPVVVESYDEIVFPEPS+ FLARVQ
Sbjct: 135 VIYMLCSLDMVDSSAARYHHLKLYPEDEPGPVSMKKPVVVESYDEIVFPEPSEGFLARVQ 194

Query: 153 NHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADELLQLAAARQQ 212
           +HPAV LPRLP GFTLPPP+P+EDTSKRKRGDTKD+PLAQWFM FSEAD+LLQLAAARQQ
Sbjct: 195 SHPAVNLPRLPAGFTLPPPMPVEDTSKRKRGDTKDNPLAQWFMKFSEADKLLQLAAARQQ 254

Query: 213 VQAHIAKLKRQISLIDGQQQQLRSTSD 239
           VQAHIAKL+RQISLI+GQ Q L+S S+
Sbjct: 255 VQAHIAKLRRQISLINGQDQHLKSPSN 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473621|ref|XP_003607095.1| YEATS domain-containing protein [Medicago truncatula] gi|355508150|gb|AES89292.1| YEATS domain-containing protein [Medicago truncatula]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 190/235 (80%), Positives = 220/235 (93%)

Query: 5   QNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQL 64
           +N  KKLKDVEIS+PIVYGNV+FWLGKKASEYQSHKWT+YVRGA+NEDLGV++KR VFQL
Sbjct: 10  KNSGKKLKDVEISVPIVYGNVSFWLGKKASEYQSHKWTIYVRGASNEDLGVIVKRVVFQL 69

Query: 65  HSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSM 124
           H+SFNNPTR V++PPFELSE+GWGEFEIAITLYFH+DVCDKP+NLYH L+LYP+DES S 
Sbjct: 70  HTSFNNPTRIVDAPPFELSEAGWGEFEIAITLYFHSDVCDKPVNLYHQLRLYPDDESSSY 129

Query: 125 STKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGD 184
           STKKPVVVE YDE+VFP+PS++FLAR+QNHP V +PRLP G TLPPP+PIED SKR+RGD
Sbjct: 130 STKKPVVVEFYDEVVFPDPSEAFLARLQNHPVVNMPRLPAGLTLPPPIPIEDASKRRRGD 189

Query: 185 TKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
           TKD+PL+QWF+NFSEADELLQLAAARQQVQAHI+KLKRQISLIDGQ +QL+S+ D
Sbjct: 190 TKDNPLSQWFLNFSEADELLQLAAARQQVQAHISKLKRQISLIDGQHKQLKSSPD 244

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794703|ref|XP_002865236.1| hypothetical protein ARALYDRAFT_494425 [Arabidopsis lyrata subsp. lyrata] gi|297311071|gb|EFH41495.1| hypothetical protein ARALYDRAFT_494425 [Arabidopsis lyrata subsp. lyrata]

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/231 (80%), Positives = 213/231 (92%)

Query: 9   KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
           KKLKD+EIS+PIVYGNVAFWLGKKASEYQSHKW VYVRGATNED+ VV+K+ VFQLHSSF
Sbjct: 37  KKLKDIEISVPIVYGNVAFWLGKKASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSF 96

Query: 69  NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
           NNPTR +E PPFE+SESGWGEFEIA+TL+FH+DVCDKPL+LYHHLKLYPEDESG ++ KK
Sbjct: 97  NNPTRVIEEPPFEVSESGWGEFEIAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKK 156

Query: 129 PVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDH 188
           PVVVESYDEIVFP+PS+SFL+RVQNHPA+T PRLP G+ LP P+ +EDT K+KRGDTKDH
Sbjct: 157 PVVVESYDEIVFPDPSESFLSRVQNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDH 216

Query: 189 PLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
            L QWFM+FSEADELLQLAAARQQVQAHIAKL+RQISL++GQ Q +++ SD
Sbjct: 217 SLGQWFMSFSEADELLQLAAARQQVQAHIAKLRRQISLLEGQNQTVKTGSD 267

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242448|ref|NP_199373.1| YEATS family protein [Arabidopsis thaliana] gi|10177934|dbj|BAB11199.1| unnamed protein product [Arabidopsis thaliana] gi|18175886|gb|AAL59945.1| unknown protein [Arabidopsis thaliana] gi|20465403|gb|AAM20126.1| unknown protein [Arabidopsis thaliana] gi|39545912|gb|AAR28019.1| TAF14b [Arabidopsis thaliana] gi|332007890|gb|AED95273.1| YEATS family protein [Arabidopsis thaliana]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/231 (80%), Positives = 213/231 (92%)

Query: 9   KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
           KKLKD+EIS+PIVYGNVAFWLGKKASEYQSHKW VYVRGATNED+ VV+K+ VFQLHSSF
Sbjct: 37  KKLKDIEISVPIVYGNVAFWLGKKASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSF 96

Query: 69  NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
           N+PTR +E PPFE+SESGWGEFEIA+TL+FH+DVCDKPL+LYHHLKLYPEDESG ++ KK
Sbjct: 97  NSPTRVIEEPPFEVSESGWGEFEIAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKK 156

Query: 129 PVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDH 188
           PVVVESYDEIVFP+PS+SFLARVQNHPA+T PRLP G+ LP P+ +EDT K+KRGDTKDH
Sbjct: 157 PVVVESYDEIVFPDPSESFLARVQNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDH 216

Query: 189 PLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
            L QWFM+FSEADELLQLAAARQQVQAHIAKL+RQISL++GQ Q +++ SD
Sbjct: 217 SLGQWFMSFSEADELLQLAAARQQVQAHIAKLRRQISLLEGQNQTVKTGSD 267

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188213|ref|NP_001190475.1| YEATS family protein [Arabidopsis thaliana] gi|332007891|gb|AED95274.1| YEATS family protein [Arabidopsis thaliana]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/231 (80%), Positives = 213/231 (92%)

Query: 9   KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
           KKLKD+EIS+PIVYGNVAFWLGKKASEYQSHKW VYVRGATNED+ VV+K+ VFQLHSSF
Sbjct: 36  KKLKDIEISVPIVYGNVAFWLGKKASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSF 95

Query: 69  NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
           N+PTR +E PPFE+SESGWGEFEIA+TL+FH+DVCDKPL+LYHHLKLYPEDESG ++ KK
Sbjct: 96  NSPTRVIEEPPFEVSESGWGEFEIAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKK 155

Query: 129 PVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDH 188
           PVVVESYDEIVFP+PS+SFLARVQNHPA+T PRLP G+ LP P+ +EDT K+KRGDTKDH
Sbjct: 156 PVVVESYDEIVFPDPSESFLARVQNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDH 215

Query: 189 PLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLRSTSD 239
            L QWFM+FSEADELLQLAAARQQVQAHIAKL+RQISL++GQ Q +++ SD
Sbjct: 216 SLGQWFMSFSEADELLQLAAARQQVQAHIAKLRRQISLLEGQNQTVKTGSD 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543907|ref|XP_002513016.1| YEATS domain-containing protein, putative [Ricinus communis] gi|223548027|gb|EEF49519.1| YEATS domain-containing protein, putative [Ricinus communis]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/206 (90%), Positives = 198/206 (96%)

Query: 7   LNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHS 66
           LNKKLKDVEIS+PIVYGN++FWLGKKA+EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHS
Sbjct: 12  LNKKLKDVEISVPIVYGNISFWLGKKANEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHS 71

Query: 67  SFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMST 126
           SFNNPTR +ESPPFELSE+GWGEFEIAITLYFH DVCDKPLNLYHHLKLYPEDESG MS 
Sbjct: 72  SFNNPTRVIESPPFELSEAGWGEFEIAITLYFHHDVCDKPLNLYHHLKLYPEDESGPMSI 131

Query: 127 KKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTK 186
           KKPVVVESYDEIVFPEPS+ F ARVQ+HPAVTLPRLP GF+LPPPVP+ED SKRKRGDTK
Sbjct: 132 KKPVVVESYDEIVFPEPSEGFFARVQSHPAVTLPRLPAGFSLPPPVPVEDASKRKRGDTK 191

Query: 187 DHPLAQWFMNFSEADELLQLAAARQQ 212
           DHPL+QWFMNFSEADELLQLAAARQQ
Sbjct: 192 DHPLSQWFMNFSEADELLQLAAARQQ 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2157156	268	GAS41 "GLIOMAS 41" [Arabidopsi	0.962	0.861	0.744	6.6e-97
UNIPROTKB|Q32LE1	227	YEATS4 "Uncharacterized protei	0.554	0.585	0.485	3.3e-31
UNIPROTKB|E2QSI2	227	YEATS4 "Uncharacterized protei	0.554	0.585	0.485	3.3e-31
UNIPROTKB|O95619	227	YEATS4 "YEATS domain-containin	0.554	0.585	0.485	3.3e-31
MGI|MGI:1927224	227	Yeats4 "YEATS domain containin	0.554	0.585	0.485	3.3e-31
RGD|1305741	227	Yeats4 "YEATS domain containin	0.554	0.585	0.485	3.3e-31
UNIPROTKB|Q8UVS4	227	GAS41 "GAS41" [Gallus gallus (	0.554	0.585	0.470	8.8e-31
SGD|S000005051	226	YAF9 "Subunit of NuA4 histone	0.641	0.681	0.403	1.4e-30
UNIPROTKB|E1BU44	224	YEATS4 "Uncharacterized protei	0.554	0.593	0.481	3e-30
ZFIN|ZDB-GENE-040718-252	226	yeats4 "YEATS domain containin	0.55	0.584	0.470	3.8e-30

TAIR|locus:2157156 GAS41 "GLIOMAS 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
 Identities = 172/231 (74%), Positives = 200/231 (86%)

Query:     9 KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             KKLKD+EIS+PIVYGNVAFWLGKKASEYQSHKW VYVRGATNED+ VV+K+ VFQLHSSF
Sbjct:    37 KKLKDIEISVPIVYGNVAFWLGKKASEYQSHKWAVYVRGATNEDISVVVKKVVFQLHSSF 96

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
             N+PTR +E PPFE+SESGWGEFEIA+TL+FH+DVCDKPL+LYHHLKLYPEDESG ++ KK
Sbjct:    97 NSPTRVIEEPPFEVSESGWGEFEIAMTLHFHSDVCDKPLSLYHHLKLYPEDESGPLTMKK 156

Query:   129 PVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDH 188
             PVVVESYDEIVFP+PS+SFLARVQNHPA+T PRLP G+ LP P+ +EDT K+KRGDTKDH
Sbjct:   157 PVVVESYDEIVFPDPSESFLARVQNHPALTFPRLPSGYNLPAPMQVEDTGKKKRGDTKDH 216

Query:   189 PLAQWFMNFSEADEXXXXXXXXXXXXXHIAKLKRQISLIDGQQQQLRSTSD 239
              L QWFM+FSEADE             HIAKL+RQISL++GQ Q +++ SD
Sbjct:   217 SLGQWFMSFSEADELLQLAAARQQVQAHIAKLRRQISLLEGQNQTVKTGSD 267

GO:0005634 "nucleus" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0090239 "regulation of histone H4 acetylation" evidence=IMP

UNIPROTKB|Q32LE1 YEATS4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 66/136 (48%), Positives = 93/136 (68%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   133 TVVSEFYDEMIFQDPT 148

GO:0043968 "histone H2A acetylation" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E2QSI2 YEATS4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 66/136 (48%), Positives = 93/136 (68%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   133 TVVSEFYDEMIFQDPT 148

GO:0043968 "histone H2A acetylation" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|O95619 YEATS4 "YEATS domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 66/136 (48%), Positives = 93/136 (68%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   133 TVVSEFYDEMIFQDPT 148

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0040008 "regulation of growth" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0005654 "nucleoplasm" evidence=IDA

GO:0007067 "mitosis" evidence=NAS

GO:0016363 "nuclear matrix" evidence=NAS

GO:0005200 "structural constituent of cytoskeleton" evidence=NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IDA

GO:0043968 "histone H2A acetylation" evidence=IDA

GO:0043967 "histone H4 acetylation" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0003677 "DNA binding" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1927224 Yeats4 "YEATS domain containing 4" [Mus musculus (taxid:10090)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 66/136 (48%), Positives = 93/136 (68%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   133 TVVSEFYDEMIFQDPT 148

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO;IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=ISO

GO:0040008 "regulation of growth" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=ISO

GO:0043968 "histone H2A acetylation" evidence=ISO

RGD|1305741 Yeats4 "YEATS domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 66/136 (48%), Positives = 93/136 (68%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  PIVYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D + +M  KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSD-TNAMLGKK 132

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   133 TVVSEFYDEMIFQDPT 148

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA;ISO

GO:0043967 "histone H4 acetylation" evidence=IEA;ISO

GO:0043968 "histone H2A acetylation" evidence=IEA;ISO

UNIPROTKB|Q8UVS4 GAS41 "GAS41" [Gallus gallus (taxid:9031)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 64/136 (47%), Positives = 92/136 (67%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  P+VYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPVVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D +  +  KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSDTNAILG-KK 132

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   133 TVVSEFYDEMIFQDPT 148

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IEA

GO:0043967 "histone H4 acetylation" evidence=IEA

GO:0043968 "histone H2A acetylation" evidence=IEA

SGD|S000005051 YAF9 "Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 69/171 (40%), Positives = 102/171 (59%)

Query:     7 LNKKLKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVF 62
             ++K++K + +S PI+YGN A  +G      A    +H WT++VRG  NED+   IK+ VF
Sbjct:     5 ISKRIKTLSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVF 64

Query:    63 QLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP----- 117
             +LH ++ NP R++E+PPFEL+E+GWGEF+I I +YF  +  +K LN YH L+L+P     
Sbjct:    65 KLHDTYPNPVRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPV 124

Query:   118 --EDESGSMST----KKPVVVES--YDEIVFPEPSDSFLARVQNHPAVTLP 160
                D     +T     K   V S  +DEIVF EP++ F   + + P   LP
Sbjct:   125 PNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFFKILMSRPGNLLP 175

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006338 "chromatin remodeling" evidence=IGI;IDA;IPI

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0000812 "Swr1 complex" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0043486 "histone exchange" evidence=IMP

GO:0006281 "DNA repair" evidence=IEA;IDA

GO:0035267 "NuA4 histone acetyltransferase complex" evidence=IPI

GO:0006348 "chromatin silencing at telomere" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E1BU44 YEATS4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 66/137 (48%), Positives = 93/137 (67%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             K K V I  P+VYGNVA + GKK  E   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    13 KRKGVTIVKPVVYGNVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 72

Query:    69 NNPTRAVES-PPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTK 127
              NP RAV + PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D +  +  K
Sbjct:    73 GNPLRAVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSDTNAILG-K 130

Query:   128 KPVVVESYDEIVFPEPS 144
             K VV E YDE++F +P+
Sbjct:   131 KTVVSEFYDEMIFQDPT 147

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

ZFIN|ZDB-GENE-040718-252 yeats4 "YEATS domain containing 4" [Danio rerio (taxid:7955)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 64/136 (47%), Positives = 91/136 (66%)

Query:    10 KLKDVEISIPIVYGNVAFWLGKKASEY-QSHKWTVYVRGATNEDLGVVIKRAVFQLHSSF 68
             ++K V I  PIV+GNVA + GKK  +   +H+WTVYV+   NED+   +K+  F+LH S+
Sbjct:    15 RVKGVTIVKPIVFGNVARYFGKKREDDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESY 74

Query:    69 NNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKK 128
              NP R V  PP+E++E+GWGEFEI I ++F  D  ++P+ LYH LKL+  D S     KK
Sbjct:    75 GNPLRVVTKPPYEITETGWGEFEIIIKIFF-IDPNERPVTLYHLLKLFQSDSSAM--PKK 131

Query:   129 PVVVESYDEIVFPEPS 144
              VV E YDE++F +P+
Sbjct:   132 TVVSEFYDEMIFQDPT 147

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q10319	AF9_SCHPO	No assigned EC number	0.3506	0.8375	0.9262	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.IV.851.1 hypothetical protein (271 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	240
pfam03366	84	pfam03366, YEATS, YEATS family	9e-36
COG5033	225	COG5033, TFG3, Transcription initiation factor IIF	1e-24

>gnl|CDD|190614 pfam03366, YEATS, YEATS family

 Score =  121 bits (306), Expect = 9e-36
 Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 2/83 (2%)

Query: 38  SHKWTVYVRGATNE-DLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITL 96
           +HKWTV+VRG  NE DL   IK+  F+LH SF NP R V  PPFE++E+GWGEFEI I +
Sbjct: 1   THKWTVFVRGLDNEGDLSYFIKKVTFKLHESFPNPVRTVTKPPFEVTETGWGEFEIPIKI 60

Query: 97  YFHADVCDKPLNLYHHLKLYPED 119
           YF  D  +KP+ + H LKL+PE 
Sbjct: 61  YFV-DSNEKPVTIQHDLKLHPEG 82

We have named this family the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit'. This family also contains the GAS41 protein. All these proteins are thought to have a transcription stimulatory activity. Length = 84

>gnl|CDD|227366 COG5033, TFG3, Transcription initiation factor IIF, auxiliary subunit [Transcription]

 Score = 97.2 bits (242), Expect = 1e-24
 Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 16/163 (9%)

Query: 8   NKKLKDVEISIPIVYGNVAFWLG--KKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLH 65
            K+ + ++    I+ G     LG  ++     +H W V+VR    ED+  ++K+ +F+LH
Sbjct: 4   VKRTERLKTQRVIIPGEAKP-LGNEERFPVRHTHIWLVFVRAPGKEDIATIVKKVIFKLH 62

Query: 66  SSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP-------- 117
            +F+NPTR +ESPPFE+ E+GWGEF+I I ++F     +K ++ Y H    P        
Sbjct: 63  PTFSNPTRTIESPPFEIKETGWGEFDIQIKIFFAEKAGEKTIHFYLHFGDEPYAVDEPVD 122

Query: 118 ----EDESGSMSTKKPVV-VESYDEIVFPEPSDSFLARVQNHP 155
                 +  S  +K   V      E  F EP+   L  +    
Sbjct: 123 IPVNRPDLTSELSKSGEVESVYKREKRFNEPNIQALKLLNGAK 165

Length = 225

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
KOG3149	249	consensus Transcription initiation factor IIF, aux	100.0
COG5033	225	TFG3 Transcription initiation factor IIF, auxiliar	100.0
PF03366	84	YEATS: YEATS family; InterPro: IPR005033 Named the	100.0

>KOG3149 consensus Transcription initiation factor IIF, auxiliary subunit [Transcription]

Probab=100.00  E-value=4.2e-44  Score=320.99  Aligned_cols=231  Identities=36%  Similarity=0.577  Sum_probs=187.0

Q ss_pred             cccCcceeceEEEEeEEEccceEEcCCCCCCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCCCcceeecCCcEEEe
Q 026297            5 QNLNKKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSE   84 (240)
Q Consensus         5 ~~~~kR~k~~~i~~pivyGn~a~~l~k~~~~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~nP~Rvv~~PPFevtE   84 (240)
                      .++.+|++.++|+++|+|||.|++++++.++.+||.|+|||||.+++|++.||+||+|+||+||+||+|+|++|||+|+|
T Consensus         3 ~~~~~~~~~~~~~~~iv~G~~a~~~~~~~~~~~th~w~v~v~~~~~ed~~~~V~KV~f~LH~sf~~P~Rvv~~pPf~i~E   82 (249)
T KOG3149|consen    3 TASIKRTKECTISVPIVPGNRAAILGKRLPDGFTHIWEVYVRGPGKEDISAFVDKVVFKLHESFPNPRRVVESPPFEITE   82 (249)
T ss_pred             CcCcceeeeeeEEeeeecCccccccCCCCCcccceeeEEEecCcCccccceeeeeeeeecccccccccccccCCCceEEe
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEeEEEEEEEEEeeCCCCCCEEEEEEeecCCCCCC---C-----------CCcCCCCeEEEeee-EEEeeCCCHHHHH
Q 026297           85 SGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDES---G-----------SMSTKKPVVVESYD-EIVFPEPSDSFLA  149 (240)
Q Consensus        85 ~GWGeF~I~I~I~F~~~~~ekp~~i~H~L~l~~~~~~---~-----------~~~~~~~v~~e~yd-eivF~~Pse~f~~  149 (240)
                      +|||+|+|.|+|||.++.+++++.++|+|.|++++..   .           ..+.+.+++++.|+ +++|++|+++++.
T Consensus        83 tGwgeF~i~i~i~f~d~~~~~~v~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~r~~v~~~~~~~e~~f~~~~~~~~~  162 (249)
T KOG3149|consen   83 TGWGEFEIQIEIFFTDDANEKKVTLYHDLKLHSYGAPPVPHEESTKKTFVNPTISLRIPVVREGVDVEIVFPDPTESTSI  162 (249)
T ss_pred             eccccceEEEEEEeccCCCCceeeeeeeEEeeccCCCCccchhhhcccccccchhcccccccccccceeecCCCCccccc
Confidence            9999999999999999999999999999999987431   1           12456789999999 9999999999999


Q ss_pred             HHhcCCCccCCCCCCCCCCCCCCCCcccccccCCCCCCCCcchhhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026297          150 RVQNHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLIDG  229 (240)
Q Consensus       150 ~L~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~f~~~~e~~el~~l~~a~~~V~~~i~~lk~~l~~~e~  229 (240)
                      .+...+..+....+....++............+..+++.-...+.-...|..+.++++.+.+.++.++.++++++..++.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  242 (249)
T KOG3149|consen  163 EASSRPVGPGSNLAAVTDLKQVKSKTLPSLLSKESSKDVKTEKSSERPNEIDEVDRLEKKIKELKKEINKVRKDIEKLEG  242 (249)
T ss_pred             ccCCCCCcCCccccccccccccccccCcccccccccccccccccccccccchhhhhhhhhhhhhhhHHHHHHHhhhhccc
Confidence            99988754433333222222111111111112222223233344556668999999999999999999999999999998


Q ss_pred             hhhhcc
Q 026297          230 QQQQLR  235 (240)
Q Consensus       230 ~~~~~k  235 (240)
                      +.+-.+
T Consensus       243 ~~~~~~  248 (249)
T KOG3149|consen  243 EIDLQK  248 (249)
T ss_pred             cccccc
Confidence            865443

>COG5033 TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription]

Probab=100.00  E-value=3.2e-39  Score=281.53  Aligned_cols=198  Identities=28%  Similarity=0.463  Sum_probs=165.0

Q ss_pred             CcceeceEEEEeEEEccceEEcCCC--CCCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCCCcceeecCCcEEEee
Q 026297            8 NKKLKDVEISIPIVYGNVAFWLGKK--ASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSES   85 (240)
Q Consensus         8 ~kR~k~~~i~~pivyGn~a~~l~k~--~~~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~nP~Rvv~~PPFevtE~   85 (240)
                      .+|+.++.++++|++| .|..++..  .+..+||-|.||||++++||+++||+||+|+|||||+||+|++++|||+|.|+
T Consensus         4 ~krt~r~~t~r~Iipg-ea~~~~~e~~~P~r~th~w~v~v~~~g~E~~~~iv~KVifkLH~Tf~NP~Rti~~pPFeI~Et   82 (225)
T COG5033           4 VKRTERLKTQRVIIPG-EAKPLGNEERFPVRHTHIWLVFVRAPGKEDIATIVKKVIFKLHPTFSNPTRTIESPPFEIKET   82 (225)
T ss_pred             ceeeEeeeeeceeccC-ccccCCccccCCchhhEEEEEEEeCCCCcchhhhhheeeEEeccccCCCcccccCCCcEEEec
Confidence            7999999999999999 99999864  78889999999999999999999999999999999999999999999999999


Q ss_pred             eEEeEEEEEEEEEeeCCCCCCEEEEEEeecCCCCCCCC-------------CcCCCCeEEEeeeEEEeeCCCHHHHHHHh
Q 026297           86 GWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESGS-------------MSTKKPVVVESYDEIVFPEPSDSFLARVQ  152 (240)
Q Consensus        86 GWGeF~I~I~I~F~~~~~ekp~~i~H~L~l~~~~~~~~-------------~~~~~~v~~e~ydeivF~~Pse~f~~~L~  152 (240)
                      |||||+|.|+|||.++++++.+.++|++.++++....+             .+....|-+..+++++|++|....+++|.
T Consensus        83 GWGEF~i~I~iff~~~age~~~~fyl~f~~~~Y~v~~~v~~~~~~~~l~~elsk~geve~~~~~~~~~nep~i~~~k~~~  162 (225)
T COG5033          83 GWGEFDIQIKIFFAEKAGEKTIHFYLHFGDEPYAVDEPVDIPVNRPDLTSELSKSGEVESVYKREKRFNEPNIQALKLLN  162 (225)
T ss_pred             ccccceEEEEEEEecCCCceEeehhhhcccccccccccccccccccchhhhhhhcCcccceeeeeecccCchhHHHHhhh
Confidence            99999999999999999998777777777777542111             12234566777999999999999999998


Q ss_pred             cCCCccCCCCCCCCCCCCCCCCcccccccCCCCCCCCcchhhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026297          153 NHPAVTLPRLPVGFTLPPPVPIEDTSKRKRGDTKDHPLAQWFMNFSEADELLQLAAARQQVQAHIAKLKRQISLID  228 (240)
Q Consensus       153 ~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~f~~~~e~~el~~l~~a~~~V~~~i~~lk~~l~~~e  228 (240)
                      ..+..      .++.|+..            .+.+    ..|+.+.++++++++..+.+++...|+.++.....|-
T Consensus       163 ~~~~~------~a~gl~~~------------~edd----~~~v~Ql~~d~~~~v~~~ie~~~~~id~y~~~~~~L~  216 (225)
T COG5033         163 GAKMK------LAIGLHKL------------REDD----LVFVVQLVQDPIMAVLNLIEKGEFKIDLYKLPSDLLH  216 (225)
T ss_pred             cCccc------ccccCccc------------cccc----ceeeEecCcCHHHHHHhccccCceEeeehhCchhhhh
Confidence            77631      12233321            1122    4588999999999999999999999999887666543

>PF03366 YEATS: YEATS family; InterPro: IPR005033 Named the YEATS family, after `YNK7', `ENL', `AF-9', and `TFIIF small subunit', this family also contains the GAS41 protein

Probab=100.00  E-value=1.9e-36  Score=231.51  Aligned_cols=82  Identities=54%  Similarity=1.007  Sum_probs=70.5

Q ss_pred             eeeEEEEEeCCCCCCcccceeeeEEEeCCCCCCCcceeecCCcEEEeeeEEeEEEEEEEEEeeCCCCCCEEEEEEeecCC
Q 026297           38 SHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP  117 (240)
Q Consensus        38 tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~nP~Rvv~~PPFevtE~GWGeF~I~I~I~F~~~~~ekp~~i~H~L~l~~  117 (240)
                      ||+|+||||+.+++|++++|+||+|+|||||+||+|++++|||+|+|+|||||+|.|+|+|+++++++++++.|+|+|++
T Consensus         1 th~W~v~Vr~~~~~d~~~~i~kV~f~LHpsF~~p~r~v~~pPFevte~GWGeF~i~I~i~f~~~~~~~~~~~~h~L~l~~   80 (84)
T PF03366_consen    1 THKWTVYVRGLDNEDLSYFIKKVTFKLHPSFPNPVRVVTKPPFEVTETGWGEFEIPIKIHFKDPSNEKPVTIQHDLKLHQ   80 (84)
T ss_dssp             -EEEEEEEEECCCT--TTTEEEEEEES-TTSSS-EEECSSTTEEEEEEESS--EEEEEEECCCGGCTCEEEEEEE--SSS
T ss_pred             CcEEEEEEEeCCCCCccceEEEEEEECCCCCCCCceEecCCCCEEEEeEeccEEEEEEEEEeCCCCCCcEEEEEEEEcCC
Confidence            79999999999999999999999999999999999999999999999999999999999999877899999999999998


Q ss_pred             CC
Q 026297          118 ED  119 (240)
Q Consensus       118 ~~  119 (240)
                      ++
T Consensus        81 ~~   82 (84)
T PF03366_consen   81 DG   82 (84)
T ss_dssp             CE
T ss_pred             CC
Confidence            64

All these proteins are thought to have a transcription stimulatory activity.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3QRL_A 2L7E_A 3FK3_C 3RLS_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	240
3rls_A	175	Crystal Structure Of Yeast Af-9 Homolog Protein Yaf		4e-31
3fk3_A	164	Structure Of The Yeats Domain, Yaf9 Length = 164		4e-29
2l7e_A	131	The Structure Of A Domain From Yeast Length = 131		3e-05
3qrl_A	140	Crystal Structure Of The Taf14 Yeats Domain Length		3e-05

>pdb|3RLS|A Chain A, Crystal Structure Of Yeast Af-9 Homolog Protein Yaf9 Length = 175

Iteration: 1
 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 17/169 (10%)
Query: 11  LKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHS 66
           +K + +S PI+YGN A  +G      A    +H WT++VRG  NED+   IK+ VF+LH 
Sbjct: 1   IKTLSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHD 60
Query: 67  SFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP--------- 117
           ++ NP R++E+PPFEL+E+GWGEF+I I +YF  +  +K LN YH L+L+P         
Sbjct: 61  TYPNPVRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNSD 120
Query: 118 ---EDESGSMSTKKPVVVESY-DEIVFPEPSDSFLARVQNHPAVTLPRL 162
              E  +   ++K   V   Y DEIVF EP++ F   + + P   LP L
Sbjct: 121 NGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFFKILMSRPGNLLPSL 169

>pdb|3FK3|A Chain A, Structure Of The Yeats Domain, Yaf9 Length = 164

Iteration: 1
 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 93/156 (59%), Gaps = 17/156 (10%)
Query: 10  KLKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLH 65
           ++K + +S PI+YGN A   G      A    +H WT++VRG  NED+   IK+ VF+LH
Sbjct: 3   RIKTLSVSRPIIYGNTAKKXGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLH 62
Query: 66  SSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYP-------- 117
            ++ NP R++E+PPFEL+E+GWGEF+I I +YF  +  +K LN YH L+L+P        
Sbjct: 63  DTYPNPVRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNS 122
Query: 118 ----EDESGSMSTKKPVVVESY-DEIVFPEPSDSFL 148
               E  +   ++K   V   Y DEIVF EP++ F 
Sbjct: 123 DNGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFF 158

>pdb|2L7E|A Chain A, The Structure Of A Domain From Yeast Length = 131

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 54 GVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYF 98
            +  + ++ LH +F NP R    PPF + E GWG F + I+++ 
Sbjct: 48 ATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFL 92

>pdb|3QRL|A Chain A, Crystal Structure Of The Taf14 Yeats Domain Length = 140

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 54 GVVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGEFEIAITLYF 98
            +  + ++ LH +F NP R    PPF + E GWG F + I+++ 
Sbjct: 51 ATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFL 95

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	240
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	4e-53
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	1e-38

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A Length = 175

 Score =  168 bits (426), Expect = 4e-53
 Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 17/170 (10%)

Query: 11  LKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHS 66
           +K + +S PI+YGN A  +G      A    +H WT++VRG  NED+   IK+ VF+LH 
Sbjct: 1   IKTLSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHD 60

Query: 67  SFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESG---- 122
           ++ NP R++E+PPFEL+E+GWGEF+I I +YF  +  +K LN YH L+L+P         
Sbjct: 61  TYPNPVRSIEAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNSD 120

Query: 123 ---------SMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPAVTLPRLP 163
                      S    V    +DEIVF EP++ F   + + P   LP L 
Sbjct: 121 NGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFFKILMSRPGNLLPSLE 170

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A Length = 140

 Score =  130 bits (327), Expect = 1e-38
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 5/134 (3%)

Query: 9   KKLKDVEISIPIVYGNVAFWLGKKASEYQSHKWTVYVRGA---TNEDLGVVIKRAVFQLH 65
             +  V+ +I I               +   +W++ +        E    +  + ++ LH
Sbjct: 3   HMVATVKRTIRIKTQQHILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLH 62

Query: 66  SSFNNPTRAVESPPFELSESGWGEFEIAITLYFHADVCDKPL--NLYHHLKLYPEDESGS 123
            +F NP R    PPF + E GWG F + I+++      ++ +  +L    + Y  +    
Sbjct: 63  PTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKIPHDLNFLQESYEVEHVIQ 122

Query: 124 MSTKKPVVVESYDE 137
           +   KP++ E   +
Sbjct: 123 IPLNKPLLTEELAK 136

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	240
3rls_A	175	YAF9, protein AF-9 homolog; yeats domain, histone,	100.0
3qrl_A	140	Transcription initiation factor TFIID subunit 14;	100.0
2l5g_B	42	Putative uncharacterized protein NCOR2, G protein	85.14

>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A

Probab=100.00  E-value=7.6e-57  Score=383.11  Aligned_cols=150  Identities=43%  Similarity=0.839  Sum_probs=134.3

Q ss_pred             eeceEEEEeEEEccceEEcCC----CCCCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCCCcceeecCCcEEEeee
Q 026297           11 LKDVEISIPIVYGNVAFWLGK----KASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNNPTRAVESPPFELSESG   86 (240)
Q Consensus        11 ~k~~~i~~pivyGn~a~~l~k----~~~~~~tH~WtVyVr~~~~edls~~IkkV~F~LH~sf~nP~Rvv~~PPFevtE~G   86 (240)
                      |||++|+|||||||+|++|++    ++++++||+|+|||||++++|+++||+||+|+|||||+||+|+|++|||+|+|+|
T Consensus         1 vk~v~i~kpIv~Gn~a~~l~~~~~~~~~~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~np~Rvv~~PPFevtE~G   80 (175)
T 3rls_A            1 IKTLSVSRPIIYGNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETG   80 (175)
T ss_dssp             CCCCCEEEEEEEEEEEEECCSCCCTTCCTTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSSCEEEECSSSEEEEEEE
T ss_pred             CCceEEEeCEEEcceeEECCccccCCCCCCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCCCcEEEeCCCCEEEEeE
Confidence            699999999999999999986    3567899999999999999999999999999999999999999999999999999


Q ss_pred             EEeEEEEEEEEEeeCCCCCCEEEEEEeecCCCCCCC-------C------CcCCCCeEEEeeeEEEeeCCCHHHHHHHhc
Q 026297           87 WGEFEIAITLYFHADVCDKPLNLYHHLKLYPEDESG-------S------MSTKKPVVVESYDEIVFPEPSDSFLARVQN  153 (240)
Q Consensus        87 WGeF~I~I~I~F~~~~~ekp~~i~H~L~l~~~~~~~-------~------~~~~~~v~~e~ydeivF~~Pse~f~~~L~~  153 (240)
                      ||||+|.|+|||++++++|+++|+|+|+||+++.+.       .      ..+++||++|+||||||+||+|+||++|++
T Consensus        81 WGeF~i~I~i~F~~~~~ek~i~i~H~L~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V~se~ydEivF~ePte~f~~~L~~  160 (175)
T 3rls_A           81 WGEFDINIKVYFVEEANEKVLNFYHRLRLHPYANPVPNSDNGNEQNTTDHNSKDAEVSSVYFDEIVFNEPNEEFFKILMS  160 (175)
T ss_dssp             SSCCEEEEEEEECGGGCCCCEEEEEECCCCC-----------------------CCEEEEEEEEEEESSCCHHHHHHHHH
T ss_pred             EeeEEEEEEEEEeCCCCCccEEEEEEEEecCCCCccccccccccccccccccCCCceEEEEeccEEEeCCCHHHHHHHHh
Confidence            999999999999988899999999999999986441       1      124789999999999999999999999999


Q ss_pred             CCCccCC
Q 026297          154 HPAVTLP  160 (240)
Q Consensus       154 ~~~~~~~  160 (240)
                      +|+.++|
T Consensus       161 ~p~~~lp  167 (175)
T 3rls_A          161 RPGNLLP  167 (175)
T ss_dssp             STTCCSC
T ss_pred             CCCccCC
Confidence            9987664

>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A

Probab=100.00  E-value=5.8e-38  Score=258.57  Aligned_cols=126  Identities=20%  Similarity=0.481  Sum_probs=107.5

Q ss_pred             EEEEeEEEccceEEcCCCC--CCCCeeeEE--EEEeCCCCCCcc-cceeeeEEEeCCCCCCCcceeecCCcEEEeeeEEe
Q 026297           15 EISIPIVYGNVAFWLGKKA--SEYQSHKWT--VYVRGATNEDLG-VVIKRAVFQLHSSFNNPTRAVESPPFELSESGWGE   89 (240)
Q Consensus        15 ~i~~pivyGn~a~~l~k~~--~~~~tH~Wt--VyVr~~~~edls-~~IkkV~F~LH~sf~nP~Rvv~~PPFevtE~GWGe   89 (240)
                      .....|+.+..  .+++..  .+.++|+|+  |||||.+++|++ +||+||+|+|||||+||+|+|++|||+|+|+||||
T Consensus         9 krtvr~~T~Q~--~~~~~~~~eg~~~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~np~r~v~~pPF~v~e~GWGe   86 (140)
T 3qrl_A            9 KRTIRIKTQQH--ILPEVPPVENFPVRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGWGG   86 (140)
T ss_dssp             EEEEEEEEEEE--ECTTSCCBTTBCCEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSSCEEEECSTTCCEEEEESSC
T ss_pred             EEEEEEEEeee--eCCCCCCCCCCcccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCCCeEEEcCCCcEEEEEEeee
Confidence            33444444443  565543  345789999  999999999985 89999999999999999999999999999999999


Q ss_pred             EEEEEEEEEeeCCCCCCEEEEEEeecCCCCCCCCCcCCCCeEEEeeeEEEeeCCCHHHHHHHhcCCC
Q 026297           90 FEIAITLYFHADVCDKPLNLYHHLKLYPEDESGSMSTKKPVVVESYDEIVFPEPSDSFLARVQNHPA  156 (240)
Q Consensus        90 F~I~I~I~F~~~~~ekp~~i~H~L~l~~~~~~~~~~~~~~v~~e~ydeivF~~Pse~f~~~L~~~~~  156 (240)
                      |+|.|+|||++++  ++++|.|+|+|+++.            ++.+++|+|+||+++|+++|+.+|+
T Consensus        87 F~i~I~i~f~~~~--~~~~i~H~L~f~~~~------------y~~~h~i~f~np~~~l~~~L~~~Gp  139 (140)
T 3qrl_A           87 FPLDISVFLLEKA--GERKIPHDLNFLQES------------YEVEHVIQIPLNKPLLTEELAKSGS  139 (140)
T ss_dssp             CCEEEEEEEGGGT--EEEEEEECCCSSSSE------------EEEEEEEEEESCSHHHHHHHTTTSC
T ss_pred             EEEEEEEEEecCC--CcEEEEEEEEeCCCC------------CcceEEEEECCCCHHHHHHHHHhCC
Confidence            9999999999764  578999999999753            5678899999999999999998875

>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}

Probab=85.14  E-value=2.3  Score=28.01  Aligned_cols=32  Identities=16%  Similarity=0.288  Sum_probs=25.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026297          200 ADELLQLAAARQQVQAHIAKLKRQISLIDGQQ  231 (240)
Q Consensus       200 ~~el~~l~~a~~~V~~~i~~lk~~l~~~e~~~  231 (240)
                      -.-++|++.-..++.+.|.+|+.+++.+|...
T Consensus         8 ~qkI~kVdrEI~Kte~kI~~lqkKlkeLee~a   39 (42)
T 2l5g_B            8 IQNMDRVDREITMVEQQISKLKKKQQQLEEEA   39 (42)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45577888888888888888888888888654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00