Citrus Sinensis ID: 026308

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS
Secondary Structure (PSIPRED)
cHHHHHHHHHcccccccccccccHHHHHccccEEEEEccccccccHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHcccEEEccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccEEEEEccccEEEcccEEEEEEccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHcccccEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccEEEEccccccHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEcccEccEHHHHHHHHHHHHcccHHHcccHHHHHHHHccccccEcccccccccHHHHHHHHHHHHHcccEEEEEccEEEEEcccEEEEEEcccccHcHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHccEEEcc
Coil and Loop (DISEMBL)
MDLVANTLlsagaspamlhtieeipdftpHVRALYVNVgtlsanwlPSMKAAAQLASQlgkpwvldpvaagasgFRLNACLElvqlkptvirGNASEIIALSrasvgptkgvdssheSMDAMEAARCLAEASGAIVAVSGAvdivtdgrrvvgahngvpmMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIagemgmsmakgpasLRMHMIDCLHGLDQAALLSRTNITALS
Flexible Loop (DISEMBL)
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIialsrasvgptkGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS
Low Complexity Region (SEG)
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEasgaivavsgavdivTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS
Disordered region (IsUnstruct)
**************PAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALS**********************ARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSR*******
Disordered Region (DISOPRED)
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL*
Disordered Region (DISEMBL)
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA*****************MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS
Disordered Region (DISPRO)
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	240	2.2.26 [Sep-21-2011]
Q2K0X8	258	Hydroxyethylthiazole kina	yes	no	0.983	0.914	0.493	2e-50
B3Q1Q5	258	Hydroxyethylthiazole kina	yes	no	0.983	0.914	0.489	3e-50
B6A3G5	267	Hydroxyethylthiazole kina	yes	no	0.987	0.887	0.5	2e-49
C4L8H9	267	Hydroxyethylthiazole kina	yes	no	0.925	0.831	0.473	1e-47
Q1M5U3	267	Hydroxyethylthiazole kina	yes	no	0.987	0.887	0.504	2e-47
A5WDP1	266	Hydroxyethylthiazole kina	yes	no	0.975	0.879	0.444	1e-46
Q8F0X6	265	Hydroxyethylthiazole kina	yes	no	0.908	0.822	0.459	3e-46
Q72U64	265	Hydroxyethylthiazole kina	yes	no	0.908	0.822	0.455	7e-46
Q6AQZ6	273	Hydroxyethylthiazole kina	yes	no	0.929	0.816	0.429	7e-46
B9KL69	262	Hydroxyethylthiazole kina	yes	no	0.945	0.866	0.517	2e-45

>sp|Q2K0X8|THIM_RHIEC Hydroxyethylthiazole kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=thiM PE=3 SV=1

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/237 (49%), Positives = 149/237 (62%), Gaps = 1/237 (0%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M++ AN LL++GASPAM+H  EE  +F     AL VN+GTLS  W+  M+AAA+ A+  G
Sbjct: 21  MNIAANVLLASGASPAMVHAPEEAGEFAGIASALTVNIGTLSTQWIDGMQAAAKAAASAG 80

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVA  A+ FR  A  +L+ LKPT+IRGNASEIIAL+       +GVDS      
Sbjct: 81  KPWVLDPVAHYATTFRRQAVADLLALKPTIIRGNASEIIALAGGE-SRGQGVDSRDPVEQ 139

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A ++AR LAE   AIVAV+GAVD VTDG R V    G  +M ++TA GCS+T LI AF A
Sbjct: 140 AEDSARRLAERQQAIVAVTGAVDFVTDGERAVRIKGGSVLMPEVTALGCSLTCLIGAFAA 199

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNIT 237
             P   F AT +AL+ + +AGE     A GP S     +D L  LD  AL +R  ++
Sbjct: 200 TAPEDLFGATVAALATFAVAGEDAALGAAGPGSFAWRFLDALAALDGEALDARARVS 256

Rhizobium etli (strain CFN 42 / ATCC 51251) (taxid: 347834)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 5EC: 0

>sp|B3Q1Q5|THIM_RHIE6 Hydroxyethylthiazole kinase OS=Rhizobium etli (strain CIAT 652) GN=thiM PE=3 SV=1

 Score =  198 bits (504), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/237 (48%), Positives = 149/237 (62%), Gaps = 1/237 (0%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M++ AN LL++GASPAM+H  EE  +F     AL VN+GTLS  WL  M+AAA+ A+  G
Sbjct: 21  MNIAANVLLASGASPAMVHAPEEAGEFAGIASALTVNIGTLSTQWLDGMRAAAKAAASSG 80

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVA  A+ FR  A  +L+ LKPT+IRGNASEIIAL+       +GVDS      
Sbjct: 81  KPWVLDPVAHYATAFRRQAVADLLALKPTIIRGNASEIIALAGGE-SRGQGVDSRDPVEQ 139

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A ++AR LAE   AIVAV+GAVD VTDG R V    G  +M ++TA GC++T L+ AF A
Sbjct: 140 AEDSARRLAERQQAIVAVTGAVDFVTDGNRAVRIKGGSVLMPQVTALGCALTCLVGAFAA 199

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNIT 237
             P   F AT +AL+ + +AGE     A GP S     +D L  LD  AL +R  ++
Sbjct: 200 TAPEDLFGATVAALATFAVAGEDAALGAAGPGSFAWRFLDALAALDGEALDARARVS 256

Rhizobium etli (strain CIAT 652) (taxid: 491916)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|B6A3G5|THIM_RHILW Hydroxyethylthiazole kinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=thiM PE=3 SV=1

 Score =  195 bits (496), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/238 (50%), Positives = 148/238 (62%), Gaps = 1/238 (0%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M++ AN LL+AGASPAM+H  EE  +F     AL VN+GTLS  W+  M+AAA+  +  G
Sbjct: 30  MNIAANVLLAAGASPAMVHAAEEADEFAGIASALTVNIGTLSTQWIDGMQAAAKATTAAG 89

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVA  A+ FR +A   L+ LKPT+IRGNASEIIAL+       +GVDS      
Sbjct: 90  KPWVLDPVAHYATAFRRDAVAGLLALKPTIIRGNASEIIALAGGE-SRGQGVDSRDPVEQ 148

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A  +AR LAE   AIVAV+GAVD VTDG R V    G  +M ++TA GCS+T L+ AF A
Sbjct: 149 AEGSARWLAERQQAIVAVTGAVDFVTDGERAVRITGGSALMPQVTALGCSLTCLVGAFAA 208

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITA 238
             P   F AT +AL+ + IAGE     A GP S     +D LH LD   L +R  I+A
Sbjct: 209 TAPEDLFGATVAALATFAIAGEEAALGAAGPGSFAWRFLDALHALDAETLDARARISA 266

Rhizobium leguminosarum bv. trifolii (strain WSM2304) (taxid: 395492)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|C4L8H9|THIM_TOLAT Hydroxyethylthiazole kinase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=thiM PE=3 SV=1

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/226 (47%), Positives = 149/226 (65%), Gaps = 4/226 (1%)

Query: 3   LVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKP 62
             AN LL+ GA+PAM+   EE   F      L VNVGTL++    +++ A Q A+Q G P
Sbjct: 35  FTANVLLALGAAPAMITAPEEAGSFAAIASVLSVNVGTLTSAQAATIRIAVQSANQAGTP 94

Query: 63  WVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALS-RASVGPTKGVDSSHESMDA 121
           WVLDPVAAG   +R   C EL+Q  P  IRGNASEI+AL+ +A+ G  KGVDS+++S  A
Sbjct: 95  WVLDPVAAGVLPYRTELCRELLQQHPAAIRGNASEIMALAGQAAAG--KGVDSANQSDQA 152

Query: 122 MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA- 180
           +EAA+ LA++SGAIVAV+G +D +TDG RVV    G P+M ++T TGC++++++AAF+A 
Sbjct: 153 IEAAQVLAKSSGAIVAVTGEIDYITDGERVVSIKAGDPLMTRVTGTGCALSSVVAAFIAG 212

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLD 226
            +     +A ASA +V  IAG+   + AKGP S     +D L+ LD
Sbjct: 213 CEEKDRLDAVASACAVMAIAGQRAAAKAKGPGSFVPAFLDNLYLLD 258

Tolumonas auensis (strain DSM 9187 / TA4) (taxid: 595494)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q1M5U3|THIM_RHIL3 Hydroxyethylthiazole kinase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=thiM PE=3 SV=1

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/238 (50%), Positives = 149/238 (62%), Gaps = 1/238 (0%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M++ AN LL+AGASPAM+H  EE  +F     AL +N+GTLS  W+  M+AAA+ A+  G
Sbjct: 30  MNIAANVLLAAGASPAMVHAAEEAGEFAAIASALTINIGTLSTQWIDGMQAAAKAATSAG 89

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVA  A+ FR NA  EL+ LKPT+IRGNASEIIAL+       +GVDS      
Sbjct: 90  KPWVLDPVAHYATAFRRNAVAELLALKPTIIRGNASEIIALAGGE-SRGQGVDSRDPVEQ 148

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A  +AR LAE   A+VAV+GAVD VTDG R V    G  +M ++TA GCS+T L+ AF A
Sbjct: 149 AEGSARWLAERQRAVVAVTGAVDFVTDGERAVRIEGGSALMPQVTALGCSLTCLVGAFAA 208

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITA 238
             P   F AT +ALS + IAGE     A GP S     +D L  LD   L +R  I+A
Sbjct: 209 TAPEDIFGATVAALSTFAIAGEEAALGAAGPGSFSWRFLDALAALDAETLDARARISA 266

Rhizobium leguminosarum bv. viciae (strain 3841) (taxid: 216596)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|A5WDP1|THIM_PSYWF Hydroxyethylthiazole kinase OS=Psychrobacter sp. (strain PRwf-1) GN=thiM PE=3 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 145/236 (61%), Gaps = 2/236 (0%)

Query: 2   DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
           + VAN LL+  ASPAM+H I+E PDF     AL +N+GTL+   L SM A A++A   G 
Sbjct: 30  NTVANVLLACRASPAMVHDIQEAPDFVCLSDALAINIGTLTQTRLNSMLATAKMAHSKGI 89

Query: 62  PWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDA 121
           PWVLDPVA GA+ FR  AC +L+ L+P VIRGNASEI+AL+  S   ++G+DS      A
Sbjct: 90  PWVLDPVAVGATAFRQQACRQLLSLQPDVIRGNASEILALAGMS-SQSRGIDSGDSVAAA 148

Query: 122 MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181
             AA  L + +  +V V+G +D VTDG      ++G PMM ++TA GC++TALIA FV  
Sbjct: 149 HAAAEALTQYA-KVVVVTGEIDWVTDGMNRWAINHGHPMMTQVTAIGCALTALIAGFVGA 207

Query: 182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNIT 237
           +     +A  +AL  YG A E  M +A+GP S  +H +D L+ L    +  +  +T
Sbjct: 208 NKKAMAQAAVTALCYYGQAAEHAMQIAQGPGSFYIHFLDSLYALQATDVSQQARVT 263

Psychrobacter sp. (strain PRwf-1) (taxid: 349106)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q8F0X6|THIM_LEPIN Hydroxyethylthiazole kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=thiM PE=3 SV=1

 Score =  185 bits (469), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 144/224 (64%), Gaps = 6/224 (2%)

Query: 2   DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
           +  AN LL+ G+SPAM+   EE  +F      L +N+GT+++N   +MK AA+ A Q   
Sbjct: 40  NWTANVLLAIGSSPAMVIAKEEAGEFAKIASGLLINIGTVTSNDAITMKIAAEAAHQAKI 99

Query: 62  PWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDA 121
           PWVLDPVA GA GFR     EL+  KPTVIRGNASEI+AL+  + G  KGVDS+  S DA
Sbjct: 100 PWVLDPVAVGALGFRTELAKELLNFKPTVIRGNASEILALA-GTDGGGKGVDSTALSSDA 158

Query: 122 MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181
           +  A+ LAE +GA++A+SG +D VT+G+  +    G P+M K+T  GCS+  +IA+F+ V
Sbjct: 159 LPLAQMLAEKTGAVIAISGEIDYVTNGKETISISGGDPIMTKVTGVGCSLGGVIASFLGV 218

Query: 182 --DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLH 223
             DPL    ATASA +V+ IAG     ++KG  S  ++ +D L+
Sbjct: 219 QKDPLR---ATASASAVFAIAGTRSAKISKGSGSFAVNFLDQLN 259

Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) (taxid: 189518)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q72U64|THIM_LEPIC Hydroxyethylthiazole kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=thiM PE=3 SV=1

 Score =  184 bits (466), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 102/224 (45%), Positives = 144/224 (64%), Gaps = 6/224 (2%)

Query: 2   DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
           +  AN LL+ G+SPAM+   EE  +F      L +N+GT+++N   +MK AA+ A Q   
Sbjct: 40  NWTANVLLAIGSSPAMVIAKEEAGEFAKIASGLLINIGTVTSNDAITMKIAAEAAHQAKI 99

Query: 62  PWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDA 121
           PWVLDPVA GA GFR     EL+  KPTVIRGNASEI+AL+  + G  KGVDS+  S DA
Sbjct: 100 PWVLDPVAVGALGFRTELAKELLNFKPTVIRGNASEILALA-GTDGGGKGVDSTALSSDA 158

Query: 122 MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181
           +  A+ LAE +GA++A+SG +D VT+G+  +    G P+M K+T  GCS+  +IA+F+ V
Sbjct: 159 LPLAQMLAEKTGAVIAISGEIDYVTNGKETISISGGDPIMTKVTGVGCSLGGVIASFLGV 218

Query: 182 --DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLH 223
             DPL    ATA+A +V+ IAG     ++KG  S  ++ +D L+
Sbjct: 219 QKDPLR---ATATASAVFAIAGTRSAKISKGSGSFAVNFLDQLN 259

Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) (taxid: 267671)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q6AQZ6|THIM_DESPS Hydroxyethylthiazole kinase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN=thiM PE=3 SV=2

 Score =  184 bits (466), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 140/226 (61%), Gaps = 3/226 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+  AN LL+ GASP M H   E+ +      +L +N+GTLS +W+ SM  A+Q A+ L 
Sbjct: 31  MNYTANVLLATGASPVMAHAQNEVEEMVAFAGSLVLNIGTLSESWVSSMLMASQRANTLK 90

Query: 61  KPWVLDPVAAGASGFRLNACLELV-QLKPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
            P +LDPV +GA+ FR  +   ++ + K +VIRGNASEI++L  +    T+GVD+S    
Sbjct: 91  TPIILDPVGSGATAFRTASAKRIIAEAKVSVIRGNASEILSLG-SEQSNTRGVDTSQSVS 149

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           DA + A  LA     I+A++G  D+VTDGRRV    NG P+M  +T TGCS TA++ AF 
Sbjct: 150 DAAQTASLLARELDTILAITGPTDLVTDGRRVFNVDNGHPLMPYVTGTGCSATAVVGAFA 209

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGL 225
           AVD  +   A  +AL+ +G+AGEM    A GP S  +H++D L+ +
Sbjct: 210 AVDRDY-LRAATTALAFFGLAGEMAGKAATGPGSFMIHLLDALYNM 254

Desulfotalea psychrophila (strain LSv54 / DSM 12343) (taxid: 177439)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|B9KL69|THIM_RHOSK Hydroxyethylthiazole kinase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=thiM PE=3 SV=1

 Score =  182 bits (462), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/230 (51%), Positives = 156/230 (67%), Gaps = 3/230 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M++VAN LL+AGASPAM+H  EE  +F    +AL +N+GT S  W+  M+AAA+ A+  G
Sbjct: 27  MNVVANVLLAAGASPAMVHDAEESGEFAAIAQALTINMGTPSPRWVEGMEAAARGATAAG 86

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           +PWVLDPVA GA+ FR      L+ LKPTVIRGNASEI+AL+ A     KG DS+     
Sbjct: 87  RPWVLDPVAVGATAFRRGLGARLLALKPTVIRGNASEILALAGAET-RGKGADSADPVAA 145

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A  AA+ LAE+SGA+VAV+G VD VTDGRR +   NG P+M ++TA GCS+T ++ AF A
Sbjct: 146 AEAAAQRLAESSGAVVAVTGPVDFVTDGRRGIRCANGHPLMPRVTALGCSLTGIVGAFAA 205

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAAL 230
           + P   FEATA+AL+ +G+AGE     A GP S ++  +D LH L   AL
Sbjct: 206 IRP--PFEATAAALAFFGLAGEEAAKTATGPGSFQVAFLDALHALSPEAL 253

Rhodobacter sphaeroides (strain KD131 / KCTC 12085) (taxid: 557760)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 5

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
255554254	281	Hydroxyethylthiazole kinase, putative [R	0.995	0.850	0.782	1e-106
224075577	280	predicted protein [Populus trichocarpa]	0.995	0.853	0.786	1e-104
225433387	281	PREDICTED: hydroxyethylthiazole kinase [	1.0	0.854	0.783	1e-104
449487504	280	PREDICTED: hydroxyethylthiazole kinase-l	0.995	0.853	0.740	5e-98
449432466	280	PREDICTED: hydroxyethylthiazole kinase-l	0.995	0.853	0.740	5e-98
297741900	224	unnamed protein product [Vitis vinifera]	0.933	1.0	0.776	8e-97
15229565	276	hydroxyethylthiazole kinase [Arabidopsis	0.995	0.865	0.715	1e-96
297831230	276	hydroxyethylthiazole kinase family prote	1.0	0.869	0.712	2e-96
356534850	282	PREDICTED: hydroxyethylthiazole kinase-l	0.995	0.847	0.723	4e-91
388506468	280	unknown [Medicago truncatula]	0.995	0.853	0.710	6e-89

>gi|255554254|ref|XP_002518167.1| Hydroxyethylthiazole kinase, putative [Ricinus communis] gi|223542763|gb|EEF44300.1| Hydroxyethylthiazole kinase, putative [Ricinus communis]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/239 (78%), Positives = 220/239 (92%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDL+ANTLL+AGASPAM+H+IEE+PDFTPH +AL +N+GTL+  WLP+MKAAA+LA++LG
Sbjct: 43  MDLMANTLLAAGASPAMIHSIEEVPDFTPHTQALCINIGTLTPTWLPAMKAAAKLATKLG 102

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVAAGAS FRL +CLELV + PTVIRGN SEIIA+S+AS+G TKGVDSSHESMD
Sbjct: 103 KPWVLDPVAAGASSFRLRSCLELVGMNPTVIRGNGSEIIAISKASLGATKGVDSSHESMD 162

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A+EAA+ LA ASGAIVAVSGAVD+VTDG R VGAHNGVPMMQKITATGC+VTALIAAF+A
Sbjct: 163 AIEAAKSLALASGAIVAVSGAVDVVTDGSRAVGAHNGVPMMQKITATGCAVTALIAAFIA 222

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
           VDPLHAFEATASALS++GIAGE+GM MAKGPASLR+H+ID L+GLDQAA+ S + I++L
Sbjct: 223 VDPLHAFEATASALSIFGIAGELGMDMAKGPASLRVHLIDSLYGLDQAAVASHSKISSL 281

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075577|ref|XP_002304692.1| predicted protein [Populus trichocarpa] gi|222842124|gb|EEE79671.1| predicted protein [Populus trichocarpa]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/239 (78%), Positives = 214/239 (89%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDL+ANTLLSAGASPAM+H+IEEI DFTPH+ AL +NVGTLS  WLP+M+ AA +A + G
Sbjct: 42  MDLMANTLLSAGASPAMIHSIEEIQDFTPHIHALCINVGTLSPAWLPAMREAALVADKAG 101

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPW+LDPVAAGAS FRL ACLELV LKP+VIRGN SEIIALS+AS+G TKGVDSSHESMD
Sbjct: 102 KPWILDPVAAGASRFRLKACLELVGLKPSVIRGNGSEIIALSKASLGATKGVDSSHESMD 161

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           AMEAA+ LA++SGAIVAVSGAVDI+TDG RVVG HNGV MMQKITATGC+VTALIAAFVA
Sbjct: 162 AMEAAKSLAQSSGAIVAVSGAVDIITDGHRVVGVHNGVSMMQKITATGCAVTALIAAFVA 221

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
           VDPLHA EATASALS++GIAGEMGM MAKGPASLRMH+ID L+ LDQAA+ SR  +++L
Sbjct: 222 VDPLHALEATASALSIFGIAGEMGMDMAKGPASLRMHLIDSLYNLDQAAVSSRLKVSSL 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433387|ref|XP_002282966.1| PREDICTED: hydroxyethylthiazole kinase [Vitis vinifera]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/240 (78%), Positives = 216/240 (90%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDL+ANTLL+AGASPAMLH+++EIPDFTP   AL +NVGTLS  WLP+MK+AA+ A+Q G
Sbjct: 42  MDLMANTLLAAGASPAMLHSLQEIPDFTPQAHALLINVGTLSDAWLPAMKSAAEFATQSG 101

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           +PWVLDPVAAGA+GFRL ACLELV L+PTVIRGN SEIIALS+AS+G T+GVDS HES+D
Sbjct: 102 RPWVLDPVAAGATGFRLKACLELVGLRPTVIRGNGSEIIALSKASLGATQGVDSIHESVD 161

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           AME A+ LA+ASGAIVAVSGAVDIVTDG++VVGA NGV MMQ+ITATGCSVTALIAAFVA
Sbjct: 162 AMEYAKSLAKASGAIVAVSGAVDIVTDGQQVVGARNGVAMMQRITATGCSVTALIAAFVA 221

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS 240
           VDPLHA EAT  ALSV+G+AGEMGM MAKGPASLRMH+ID L+GLDQ A+LSR NIT+LS
Sbjct: 222 VDPLHALEATVLALSVFGVAGEMGMEMAKGPASLRMHLIDSLYGLDQPAVLSRINITSLS 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487504|ref|XP_004157659.1| PREDICTED: hydroxyethylthiazole kinase-like [Cucumis sativus]

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 177/239 (74%), Positives = 211/239 (88%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDL+ANTLLSAGASPAMLH++EE+PDFTP+  AL +NVGTLS  WLP+MK A +LA + G
Sbjct: 42  MDLMANTLLSAGASPAMLHSVEELPDFTPNADALCINVGTLSPAWLPAMKFAGELAVKAG 101

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVA GAS FR+ ACLEL+ LKPTV+RGN SEIIALS+AS+  + GVDS HES+D
Sbjct: 102 KPWVLDPVAVGASKFRMMACLELMSLKPTVVRGNGSEIIALSKASLDSSMGVDSCHESVD 161

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A+EAA+ LA++SGAIVAVSGAVDIVTDG++V+GA NGV MMQKITATGCSVTALIAAF+A
Sbjct: 162 AVEAAKSLAQSSGAIVAVSGAVDIVTDGKQVIGARNGVAMMQKITATGCSVTALIAAFLA 221

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
           VD LHA EATASALS++GIAGEMGM +AKGPASLR H+ID L+GLD+AA++SR  I++L
Sbjct: 222 VDQLHALEATASALSIFGIAGEMGMDVAKGPASLRTHLIDSLYGLDEAAIISRIRISSL 280

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432466|ref|XP_004134020.1| PREDICTED: hydroxyethylthiazole kinase-like [Cucumis sativus]

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 177/239 (74%), Positives = 211/239 (88%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDL+ANTLLSAGASPAMLH++EE+PDFTP+  AL +NVGTLS  WLP+MK A +LA + G
Sbjct: 42  MDLMANTLLSAGASPAMLHSVEELPDFTPNADALCINVGTLSPAWLPAMKFAGELAVKAG 101

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDPVA GAS FR+ ACLEL+ LKPTV+RGN SEIIALS+AS+  + GVDS HES+D
Sbjct: 102 KPWVLDPVAVGASKFRMMACLELMSLKPTVVRGNGSEIIALSKASLDSSMGVDSCHESVD 161

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A+EAA+ LA++SGAIVAVSGAVDIVTDG++V+GA NGV MMQKITATGCSVTALIAAF+A
Sbjct: 162 AVEAAKSLAQSSGAIVAVSGAVDIVTDGKQVIGARNGVAMMQKITATGCSVTALIAAFLA 221

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
           VD LHA EATASALS++GIAGEMGM +AKGPASLR H+ID L+GLD+AA++SR  I++L
Sbjct: 222 VDQLHALEATASALSIFGIAGEMGMDVAKGPASLRTHLIDSLYGLDEAAIISRIRISSL 280

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741900|emb|CBI33335.3| unnamed protein product [Vitis vinifera]

 Score =  358 bits (920), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 174/224 (77%), Positives = 200/224 (89%)

Query: 17  MLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR 76
           MLH+++EIPDFTP   AL +NVGTLS  WLP+MK+AA+ A+Q G+PWVLDPVAAGA+GFR
Sbjct: 1   MLHSLQEIPDFTPQAHALLINVGTLSDAWLPAMKSAAEFATQSGRPWVLDPVAAGATGFR 60

Query: 77  LNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIV 136
           L ACLELV L+PTVIRGN SEIIALS+AS+G T+GVDS HES+DAME A+ LA+ASGAIV
Sbjct: 61  LKACLELVGLRPTVIRGNGSEIIALSKASLGATQGVDSIHESVDAMEYAKSLAKASGAIV 120

Query: 137 AVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSV 196
           AVSGAVDIVTDG++VVGA NGV MMQ+ITATGCSVTALIAAFVAVDPLHA EAT  ALSV
Sbjct: 121 AVSGAVDIVTDGQQVVGARNGVAMMQRITATGCSVTALIAAFVAVDPLHALEATVLALSV 180

Query: 197 YGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS 240
           +G+AGEMGM MAKGPASLRMH+ID L+GLDQ A+LSR NIT+LS
Sbjct: 181 FGVAGEMGMEMAKGPASLRMHLIDSLYGLDQPAVLSRINITSLS 224

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229565|ref|NP_189045.1| hydroxyethylthiazole kinase [Arabidopsis thaliana] gi|9294672|dbj|BAB03021.1| hydoxyethylthiazole kinase-like protein [Arabidopsis thaliana] gi|34146838|gb|AAQ62427.1| At3g24030 [Arabidopsis thaliana] gi|51970052|dbj|BAD43718.1| putative hydoxyethylthiazole kinase [Arabidopsis thaliana] gi|332643325|gb|AEE76846.1| hydroxyethylthiazole kinase [Arabidopsis thaliana]

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 171/239 (71%), Positives = 202/239 (84%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDLVANTLLSAGASPAM+H++ EIPDFTPH+ AL VNVGTL+ +WLPSMKAAA+LASQL 
Sbjct: 37  MDLVANTLLSAGASPAMVHSVVEIPDFTPHIHALCVNVGTLTPDWLPSMKAAAELASQLR 96

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDP A   SGFRL ACLEL++LKPTVI+GN SEIIALS AS G TKG DSSHES D
Sbjct: 97  KPWVLDPAAVSCSGFRLKACLELIELKPTVIKGNGSEIIALSSASRGQTKGADSSHESTD 156

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A+EAA+ LA +SGA+VAVSGAVDIVTDG++V+G HNG  MMQ+ITATGCS+  LI AF+A
Sbjct: 157 AIEAAKSLAMSSGAVVAVSGAVDIVTDGKQVIGVHNGTKMMQQITATGCSLAGLIVAFLA 216

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
           +D     EAT SA++V+GIAGE+G +MA GPASLRMH+IDCL+GLD+  +L R N+T L
Sbjct: 217 IDSSRVLEATVSAMAVFGIAGELGEAMANGPASLRMHLIDCLYGLDETTVLKRVNVTRL 275

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831230|ref|XP_002883497.1| hydroxyethylthiazole kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297329337|gb|EFH59756.1| hydroxyethylthiazole kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 171/240 (71%), Positives = 203/240 (84%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDLVANTLLSAGASPAM+H++ EIPDFTPH+ AL VNVGTL+ +WLPSMKAAA+LAS+LG
Sbjct: 37  MDLVANTLLSAGASPAMVHSVVEIPDFTPHIHALCVNVGTLTPDWLPSMKAAAELASKLG 96

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KPWVLDP A   SGFRL ACLEL++LKP+VI+GN SEIIALS AS G TKG DSSHES D
Sbjct: 97  KPWVLDPAAVSCSGFRLKACLELIELKPSVIKGNGSEIIALSSASRGQTKGADSSHESTD 156

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A+EAA+ LA +SGA+VAVSGAVDIVTDG++V+G HNG  MMQKITATGCS+  L+AAF+A
Sbjct: 157 AIEAAKSLALSSGAVVAVSGAVDIVTDGKQVIGVHNGTKMMQKITATGCSLAGLVAAFLA 216

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITALS 240
           +D     +AT SA+SV+GIAGE+G +MA GP SLRMH+ID L+GLD+  +L R NIT LS
Sbjct: 217 IDSSRVLQATVSAMSVFGIAGELGEAMANGPGSLRMHLIDSLYGLDETTVLKRVNITRLS 276

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534850|ref|XP_003535964.1| PREDICTED: hydroxyethylthiazole kinase-like [Glycine max]

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 178/246 (72%), Positives = 204/246 (82%), Gaps = 7/246 (2%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MD+VANTLLSAGASPAMLH  EE+PDFTP   AL VNVGTLS +WLP+MKAAA+L   L 
Sbjct: 37  MDIVANTLLSAGASPAMLHAAEELPDFTPRAAALVVNVGTLSPSWLPAMKAAARLCMTLA 96

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV-------GPTKGVD 113
            PWVLDPVAA AS FRL+AC EL++L+PTV+RGNASEIIALS+AS          +KGVD
Sbjct: 97  TPWVLDPVAASASAFRLDACRELLKLRPTVVRGNASEIIALSQASAAAQPHTNAASKGVD 156

Query: 114 SSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTA 173
           S H+SMDA+EAA+ LA  SGAIVAVSGA DIVTDG RVVGAHNGV MMQKITATGCSVTA
Sbjct: 157 SVHKSMDAVEAAKLLARTSGAIVAVSGATDIVTDGNRVVGAHNGVAMMQKITATGCSVTA 216

Query: 174 LIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSR 233
           LIAAFVAVD  HA +A  SAL+V+G+AGE+GM MAKGPASLRMH+ID L+GLD++AL S 
Sbjct: 217 LIAAFVAVDKSHALDAAVSALAVFGVAGELGMKMAKGPASLRMHLIDELYGLDESALNSH 276

Query: 234 TNITAL 239
            N+T+L
Sbjct: 277 VNVTSL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506468|gb|AFK41300.1| unknown [Medicago truncatula]

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 172/242 (71%), Positives = 204/242 (84%), Gaps = 3/242 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           MDL+ANTLLSAGASPAM+H++EEI +FTP V AL +NVGTLS++ LP+M AAA+L SQL 
Sbjct: 38  MDLMANTLLSAGASPAMVHSLEEIHEFTPRVSALCLNVGTLSSSSLPAMIAAAKLCSQLD 97

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTK---GVDSSHE 117
            PWVLDPVA  AS FR +AC++LVQ KPTVIRGNASEII+LS  S+  +    GVDS+H 
Sbjct: 98  IPWVLDPVAVSASSFRFDACVQLVQFKPTVIRGNASEIISLSSCSLQSSAASMGVDSTHG 157

Query: 118 SMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAA 177
           SMDA+EAA+ LA+ SGAIVAVSGA DIVTDG +VVGAHNGVP+MQKITATGC+VTALIAA
Sbjct: 158 SMDAVEAAKLLAQTSGAIVAVSGATDIVTDGNQVVGAHNGVPLMQKITATGCAVTALIAA 217

Query: 178 FVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNIT 237
           FVAVD  HA +A  SAL+V+G+AGE+GM MAKGPASLRMH+ID L+GLD+A L S  NIT
Sbjct: 218 FVAVDKSHALDAAVSALAVFGVAGELGMKMAKGPASLRMHLIDSLYGLDEATLQSHVNIT 277

Query: 238 AL 239
           +L
Sbjct: 278 SL 279

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2076171	276	AT3G24030 "AT3G24030" [Arabido	0.995	0.865	0.661	4.5e-82
UNIPROTKB|P76423	262	thiM "hydroxyethylthiazole kin	0.920	0.843	0.412	8.9e-38
TIGR_CMR|CHY_0748	267	CHY_0748 "hydroxyethylthiazole	0.958	0.861	0.350	2.8e-27
TIGR_CMR|BA_0376	268	BA_0376 "hydroxyethylthiazole	0.912	0.817	0.321	3.2e-26
ASPGD|ASPL0000010315	519	AN10472 [Emericella nidulans (	0.954	0.441	0.327	1.8e-23
POMBASE|SPAC23H4.10c	518	thi4 "bifunctional thiamine-ph	0.908	0.420	0.293	2.9e-16
UNIPROTKB|G4N790	534	MGG_06448 "Hydroxyethylthiazol	0.741	0.333	0.307	1.2e-13
CGD|CAL0004069	514	THI6 [Candida albicans (taxid:	0.904	0.422	0.316	2.4e-13
SGD|S000006135	540	THI6 "Thiamine-phosphate dipho	0.441	0.196	0.327	4.3e-13
TIGR_CMR|ECH_0914	269	ECH_0914 "phosphomethylpyrimid	0.6	0.535	0.230	6.4e-05

TAIR|locus:2076171 AT3G24030 "AT3G24030" [Arabidopsis thaliana (taxid:3702)]

 Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
 Identities = 158/239 (66%), Positives = 187/239 (78%)

Query:     1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
             MDLVANTLLSAGASPAM+H++ EIPDFTPH+ AL VNVGTL+ +WLPSMKAAA+LASQL 
Sbjct:    37 MDLVANTLLSAGASPAMVHSVVEIPDFTPHIHALCVNVGTLTPDWLPSMKAAAELASQLR 96

Query:    61 KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
             KPWVLDP A   SGFRL ACLEL++LKPTVI+GN SEIIALS AS G TKG DSSHES D
Sbjct:    97 KPWVLDPAAVSCSGFRLKACLELIELKPTVIKGNGSEIIALSSASRGQTKGADSSHESTD 156

Query:   121 AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
             A+EAA+ LA                TDG++V+G HNG  MMQ+ITATGCS+  LI AF+A
Sbjct:   157 AIEAAKSLAMSSGAVVAVSGAVDIVTDGKQVIGVHNGTKMMQQITATGCSLAGLIVAFLA 216

Query:   181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
             +D     EAT SA++V+GIAGE+G +MA GPASLRMH+IDCL+GLD+  +L R N+T L
Sbjct:   217 IDSSRVLEATVSAMAVFGIAGELGEAMANGPASLRMHLIDCLYGLDETTVLKRVNVTRL 275

GO:0003824 "catalytic activity" evidence=ISS

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009228 "thiamine biosynthetic process" evidence=IEA

UNIPROTKB|P76423 thiM "hydroxyethylthiazole kinase" [Escherichia coli K-12 (taxid:83333)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 92/223 (41%), Positives = 127/223 (56%)

Query:     5 ANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWV 64
             ANTLL+ GASPAM+   EE   F     AL +NVGTL+     +M+AA + A     PW 
Sbjct:    38 ANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWT 97

Query:    65 LDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEA 124
             LDPVA GA  +R + C EL+  KP  IRGNASEI+AL+  + G  +GVD++  + +A+ A
Sbjct:    98 LDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGG-RGVDTTDAAANAIPA 156

Query:   125 ARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL 184
             A+ LA                TDG R++G H G P+M K+  TGC+++A++AA  A+ P 
Sbjct:   157 AQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCAL-PG 215

Query:   185 HAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227
                E  ASA      AGE  ++ ++GP S   H +D L  L Q
Sbjct:   216 DTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQ 258

GO:0009229 "thiamine diphosphate biosynthetic process" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=IEA

GO:0009228 "thiamine biosynthetic process" evidence=IEA

TIGR_CMR|CHY_0748 CHY_0748 "hydroxyethylthiazole kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 82/234 (35%), Positives = 112/234 (47%)

Query:     2 DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
             +  AN LL+AGASP M   +EE  D      A+ +N+GTL +  +   K A  LA++  K
Sbjct:    29 NFTANVLLAAGASPIMSEGVEEADDLVKIANAVVINIGTLHSRQVEYFKKAVYLANKYQK 88

Query:    62 PWVLDPVAAGASGFRLNACLELVQLKP-TVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
             P +LDPV  GA+ +R     EL+     T+IRGN  EI  L+  S    KGVDS      
Sbjct:    89 PLLLDPVGLGATTYRNETTFELLNSGNFTLIRGNYGEISFLAGNSA-QVKGVDSQTSDFA 147

Query:   121 AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
             A                         +G   +    G  M+QK+T TGC++T+LI AFV 
Sbjct:   148 AENLTEVAKRYKTVVVATGPVDYVIAEGELYLN-RTGDIMLQKVTGTGCALTSLIGAFVG 206

Query:   181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRT 234
             V    A  A A AL+ YG A E    ++ GP S  ++ ID L+ L +   L  T
Sbjct:   207 VIDEPALAALA-ALAFYGAASEKARKISAGPGSFLVNFIDSLYNLTKEEFLELT 259

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=ISS

GO:0009228 "thiamine biosynthetic process" evidence=ISS

TIGR_CMR|BA_0376 BA_0376 "hydroxyethylthiazole kinase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 72/224 (32%), Positives = 120/224 (53%)

Query:     2 DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
             +  AN LL+ GASP M +  EE+ +      AL +N+GTL  + + +M  A + A++   
Sbjct:    30 NFTANGLLALGASPVMAYAKEEVAEMASIAGALVLNMGTLRPDEVEAMLLAGKSANRNDV 89

Query:    62 PWVLDPVAAGASGFRLNACLEL-VQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
             P + DPV AGA+ +R      +  +++  +IRGNA+EI  +        KGVD+   + +
Sbjct:    90 PVLFDPVGAGATSYRTEVARHIPAEIELAIIRGNAAEIANVINEK-WEIKGVDAGAGNGN 148

Query:   121 AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
              +  A+  A+               TDG R +   NG  ++ KIT TGC +T++I AFVA
Sbjct:   149 VVSIAKQAADELNTVAVITGKEDVVTDGERTIVIRNGHSILTKITGTGCLLTSVIGAFVA 208

Query:   181 VDPLHAFEATASALSVYGIAGEMGMS--MAKGPASLRMHMIDCL 222
             V+  +  +A  +AL+ YG+A E+  +  + KGP S ++  ++ L
Sbjct:   209 VEKDYV-KAAVAALTFYGVAAELAAAKTVEKGPGSFQIEFLNQL 251

GO:0008972 "phosphomethylpyrimidine kinase activity" evidence=ISS

GO:0009228 "thiamine biosynthetic process" evidence=ISS

ASPGD|ASPL0000010315 AN10472 [Emericella nidulans (taxid:162425)]

 Score = 276 (102.2 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 77/235 (32%), Positives = 113/235 (48%)

Query:     2 DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
             + VAN  L+ GASP M    +E  D      AL +N+GTL++        A +  +Q G 
Sbjct:   267 NFVANVTLAIGASPIMSPYGDEATDLCQFDGALLINMGTLTSQSPSEYLKAIRAYNQRGN 326

Query:    62 PWVLDPVAAGASGFRLNACLELVQLKP-TVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
             P V DPV AGA+  R     EL+      +I+GN  EI  ++ ++    +GVDS   ++D
Sbjct:   327 PVVYDPVGAGATQIRRGVVKELMAGGYFDLIKGNEGEIRQVAGSTSVQQRGVDSGPSTLD 386

Query:   121 AMEAARC---LAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAA 177
                 AR    LA                +DG R+V   NG  ++ ++T TGC+V  +   
Sbjct:   387 HQGKARLARDLARREKNIVLLTGAVDYLSDGERIVAVENGHELLGQVTGTGCAVGTVAGC 446

Query:   178 FVAVDPLHAFEATASALSVYGIAGEMGMSM--AKGPASLRMHMIDCLHGLDQAAL 230
             F+A +P   F A  SAL +Y IA E   +    +GP S     ID L+ + QA+L
Sbjct:   447 FIAANPTDKFLAVLSALLMYEIAAENAAARDSVRGPGSFATTFIDELYAIRQASL 501

GO:0009228 "thiamine biosynthetic process" evidence=IEA

GO:0004789 "thiamine-phosphate diphosphorylase activity" evidence=IEA

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

POMBASE|SPAC23H4.10c thi4 "bifunctional thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 210 (79.0 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 68/232 (29%), Positives = 108/232 (46%)

Query:     5 ANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWV 64
             AN  L+A  SP M  + +E+ DF     AL +N+G L      +   AAQ+ + L +P +
Sbjct:   269 ANVTLAAYGSPTMGESYDEVADFAKAPGALVLNIGILENT--KTYIHAAQVNNDLARPVI 326

Query:    65 LDPVAAGASGFRLNACLELVQLKP-TVIRGNASEIIALSRASVGPTKGVDS-SHESMDA- 121
             LDPVA GA+  R      L+      +I+GN  EI+ L+    G  +GVDS S  ++ A 
Sbjct:   327 LDPVAVGATTARSKVINTLLNYAYYDIIKGNEGEIMNLA-GEQGLMRGVDSISQHTLAAR 385

Query:   122 MEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV 181
             + A   LA                +DG       NG P++ +ITA+GCS+ +++    ++
Sbjct:   386 ITAVHRLAVERRCVVAMSGAVDVISDGNSTYVIKNGNPLLGQITASGCSLGSVMGVTASI 445

Query:   182 DPLHAFEATASALSVYGIAGEMGMS--------MAKGPASLRMHMIDCLHGL 225
                    A  +A  +Y IA E+ +         + +GP +     +D LH L
Sbjct:   446 CQNDKLLAAITATLLYNIASELAVEAKNSCGDLLVQGPGTFIPIFVDKLHQL 497

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=IEA

GO:0004789 "thiamine-phosphate diphosphorylase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009228 "thiamine biosynthetic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G4N790 MGG_06448 "Hydroxyethylthiazole kinase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 186 (70.5 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 59/192 (30%), Positives = 89/192 (46%)

Query:     2 DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
             +  AN  L+ GASP M +  EE  D      AL +N+GT++   + +   A +  +   +
Sbjct:   271 NFAANVALAVGASPIMANYGEEAADLAKLGGALVINMGTVTPEGVENYVKALRAYNAAER 330

Query:    62 PWVLDPVAAGASGFRLNACLELVQL-KPTVIRGNASEIIAL-------SRASVGPT-KGV 112
             P VLDPV AGA+  R  A   ++     +VI+GN  EI A+       S    GP  +GV
Sbjct:   331 PVVLDPVGAGATTIRREAVKTILSAGHASVIKGNEGEIAAVLASTTPFSNGDPGPQQRGV 390

Query:   113 DSSHESMD----AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVG-AHNGVPMMQKITAT 167
             DS     D    A  AAR  A+               +DG R      +G P++ ++T T
Sbjct:   391 DSVSTLPDDEARARLAARLAAQQRGSIVVMTGPTDIVSDGERTFAIVQHGDPILGRVTGT 450

Query:   168 GCSVTALIAAFV 179
             GC +  +I+A +
Sbjct:   451 GCCLGTVISAML 462

GO:0005575 "cellular_component" evidence=ND

CGD|CAL0004069 THI6 [Candida albicans (taxid:5476)]

 Score = 183 (69.5 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 76/240 (31%), Positives = 106/240 (44%)

Query:     5 ANTLLSAGASPAMLHTIEEIPDF--TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKP 62
             AN  L+ GASP M    EE  +   TP+  AL +N+GT S   +   K +  +A Q   P
Sbjct:   276 ANVTLAIGASPIMSEFDEEFNELASTPNT-ALVLNLGTPSKEMMKIFKNSI-IAHQSRNP 333

Query:    63 WVLDPVAAGASGFRLNACLELVQLKP-TVIRGNASEIIALSRA--------SVGPTKGVD 113
              V DPV  GAS  RL  C +L+      VI+GN  EI AL +         S    +GVD
Sbjct:   334 IVFDPVGCGASKGRLECCRQLLDTGYFAVIKGNVGEISALRKLTSSYRESQSKSYMRGVD 393

Query:   114 SSHE--SMDAMEAARCLAEXXXXXXXXXXXXXXXTDGR-RVVGAHNGVPMMQKITATGCS 170
             S       + +E  + ++                 +G  +VV    G  +M  IT +GC+
Sbjct:   394 SISNLTEEEIIEIGKDVSIEFKAVVVITGPTNYIIEGEDKVVKVEGGNKLMGSITGSGCA 453

Query:   171 VTALIAAFV---AVDPL--HAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGL 225
             + + IAAFV   A  P   + F A   A+ +Y  AG   +S  K P       ID L+ L
Sbjct:   454 LGSTIAAFVSSQARSPQGPNNFYAAVHAVKLYNKAGA-AVS-EKTPGKFMASFIDELYKL 511

GO:0005829 "cytosol" evidence=IEA

GO:0009228 "thiamine biosynthetic process" evidence=IEA

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=IEA

GO:0004789 "thiamine-phosphate diphosphorylase activity" evidence=IEA

SGD|S000006135 THI6 "Thiamine-phosphate diphosphorylase and hydroxyethylthiazole kinase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 127 (49.8 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
 Identities = 38/116 (32%), Positives = 62/116 (53%)

Query:     5 ANTLLSAGASPAMLHTIEEIPDFT--PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKP 62
             AN  L+ G+SP M     E+ +    P+  +L +N G+++   +  +KAA    +++ +P
Sbjct:   278 ANVTLALGSSPIMSEIESEVSELARIPNA-SLLLNTGSVAP--IEMLKAAINAYNEVNRP 334

Query:    63 WVLDPVAAGASGFRLNACLELVQL---KPTVIRGNASEIIALSRASVGPTKGVDSS 115
                DPV   A+  RL  CL    L   +   I+GN SEI++L++ +    KGVDSS
Sbjct:   335 ITFDPVGYSATETRL--CLNNTLLTYGQFACIKGNCSEILSLAKLNNHKMKGVDSS 388

GO:0009228 "thiamine biosynthetic process" evidence=IEA;IMP

GO:0004417 "hydroxyethylthiazole kinase activity" evidence=IEA;IMP

GO:0004789 "thiamine-phosphate diphosphorylase activity" evidence=IEA;IMP

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009229 "thiamine diphosphate biosynthetic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TIGR_CMR|ECH_0914 ECH_0914 "phosphomethylpyrimidine kinase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]

 Score = 117 (46.2 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 35/152 (23%), Positives = 70/152 (46%)

Query:    36 VNVGTLSANWLPSMKAAAQLASQLGK-PWVLDPVAAGASGFRL---NACLELVQL---KP 88
             +N+ T+    LPS KA   +A  L   P ++DPV   AS FRL   +A  + ++    K 
Sbjct:    75 INIDTIKIGMLPSSKAIKAVAQSLPDIPIIVDPVMVSASNFRLMDSSAISDFIEYIIPKT 134

Query:    89 TVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEXXXXXXXXXXXXXXXTDG 148
             T+I  N  E  AL++  +     +  + + + ++     L +                + 
Sbjct:   135 TIITPNIPEAEALAQIEIKDQNDMTKASKIIKSLGTKHVLIKGGHINQEIINNILLTEEN 194

Query:   149 RRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
             + +  +H  +   +++  TGC++++ IA+F+A
Sbjct:   195 QIINFSHKRISK-KELHGTGCTLSSAIASFIA 225


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.129   0.373    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      240       225   0.00077  113 3  11 22  0.38    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  154 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.69u 0.11s 15.80t   Elapsed:  00:00:01
  Total cpu time:  15.69u 0.11s 15.80t   Elapsed:  00:00:01
  Start:  Fri May 10 07:01:53 2013   End:  Fri May 10 07:01:54 2013

GO:0008972 "phosphomethylpyrimidine kinase activity" evidence=ISS

GO:0009228 "thiamine biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0TFY8	THIM_ECOL5	2, ., 7, ., 1, ., 5, 0	0.4622	0.9291	0.8511	yes	no
Q6LY53	THIM_METMP	2, ., 7, ., 1, ., 5, 0	0.3966	0.9791	0.8834	yes	no
C4L8H9	THIM_TOLAT	2, ., 7, ., 1, ., 5, 0	0.4734	0.925	0.8314	yes	no
B9KL69	THIM_RHOSK	2, ., 7, ., 1, ., 5, 0	0.5173	0.9458	0.8664	yes	no
B5YV51	THIM_ECO5E	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
Q3J061	THIM_RHOS4	2, ., 7, ., 1, ., 5, 0	0.5173	0.9458	0.8664	yes	no
Q0BVF4	THIM_GRABC	2, ., 7, ., 1, ., 5, 0	0.4690	0.9333	0.8175	yes	no
B1IYX7	THIM_ECOLC	2, ., 7, ., 1, ., 5, 0	0.4444	0.9291	0.8511	yes	no
B7NCD4	THIM_ECOLU	2, ., 7, ., 1, ., 5, 0	0.4573	0.9208	0.8435	yes	no
B3QT42	THIM_CHLT3	2, ., 7, ., 1, ., 5, 0	0.4393	0.9833	0.8838	yes	no
C4ZSI8	THIM_ECOBW	2, ., 7, ., 1, ., 5, 0	0.4444	0.9291	0.8511	yes	no
A4WQ25	THIM_RHOS5	2, ., 7, ., 1, ., 5, 0	0.5066	0.925	0.8473	yes	no
B0SMR8	THIM_LEPBP	2, ., 7, ., 1, ., 5, 0	0.4194	0.9708	0.8726	yes	no
B7MEF9	THIM_ECO45	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
Q6AQZ6	THIM_DESPS	2, ., 7, ., 1, ., 5, 0	0.4292	0.9291	0.8168	yes	no
A9AAH0	THIM_METM6	2, ., 7, ., 1, ., 5, 0	0.3801	0.9875	0.8909	yes	no
B3Q1Q5	THIM_RHIE6	2, ., 7, ., 1, ., 5, 0	0.4894	0.9833	0.9147	yes	no
Q8F0X6	THIM_LEPIN	2, ., 7, ., 1, ., 5, 0	0.4598	0.9083	0.8226	yes	no
Q1R9W8	THIM_ECOUT	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
Q323B8	THIM_SHIBS	2, ., 7, ., 1, ., 5, 0	0.4577	0.9291	0.8511	yes	no
B1LN84	THIM_ECOSM	2, ., 7, ., 1, ., 5, 0	0.4577	0.9291	0.8511	yes	no
B6HYU5	THIM_ECOSE	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
A3PM38	THIM_RHOS1	2, ., 7, ., 1, ., 5, 0	0.5173	0.9458	0.8664	yes	no
Q72U64	THIM_LEPIC	2, ., 7, ., 1, ., 5, 0	0.4553	0.9083	0.8226	yes	no
B9JK65	THIM_AGRRK	2, ., 7, ., 1, ., 5, 0	0.4602	0.9916	0.8880	yes	no
Q1M5U3	THIM_RHIL3	2, ., 7, ., 1, ., 5, 0	0.5042	0.9875	0.8876	yes	no
B7MWQ4	THIM_ECO81	2, ., 7, ., 1, ., 5, 0	0.4577	0.9291	0.8511	yes	no
A4FX33	THIM_METM5	2, ., 7, ., 1, ., 5, 0	0.3966	0.9791	0.8834	yes	no
B0SE82	THIM_LEPBA	2, ., 7, ., 1, ., 5, 0	0.4194	0.9708	0.8726	yes	no
O58877	THIM_PYRHO	2, ., 7, ., 1, ., 5, 0	0.4235	0.9291	0.8415	yes	no
Q2LWX9	THIM_SYNAS	2, ., 7, ., 1, ., 5, 0	0.4142	0.9875	0.8777	yes	no
Q2K0X8	THIM_RHIEC	2, ., 7, ., 1, ., 5, 0	0.4936	0.9833	0.9147	yes	no
B7M485	THIM_ECO8A	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
A7ZNS3	THIM_ECO24	2, ., 7, ., 1, ., 5, 0	0.4577	0.9291	0.8511	yes	no
B2TY84	THIM_SHIB3	2, ., 7, ., 1, ., 5, 0	0.4622	0.9291	0.8511	yes	no
A8A1W9	THIM_ECOHS	2, ., 7, ., 1, ., 5, 0	0.4444	0.9291	0.8511	yes	no
Q04YC8	THIM_LEPBL	2, ., 7, ., 1, ., 5, 0	0.4513	0.9166	0.8333	yes	no
B6A3G5	THIM_RHILW	2, ., 7, ., 1, ., 5, 0	0.5	0.9875	0.8876	yes	no
A1ACX0	THIM_ECOK1	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
B1X7J5	THIM_ECODH	2, ., 7, ., 1, ., 5, 0	0.4444	0.9291	0.8511	yes	no
B7L9X5	THIM_ECO55	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
A6VG82	THIM_METM7	2, ., 7, ., 1, ., 5, 0	0.3760	0.9875	0.8909	yes	no
A5WDP1	THIM_PSYWF	2, ., 7, ., 1, ., 5, 0	0.4449	0.975	0.8796	yes	no
Q8FFY0	THIM_ECOL6	2, ., 7, ., 1, ., 5, 0	0.4533	0.9291	0.8511	yes	no
B7NPM9	THIM_ECO7I	2, ., 7, ., 1, ., 5, 0	0.4577	0.9291	0.8511	yes	no
Q04V49	THIM_LEPBJ	2, ., 7, ., 1, ., 5, 0	0.4513	0.9166	0.8333	yes	no
A6UPE5	THIM_METVS	2, ., 7, ., 1, ., 5, 0	0.3734	0.9833	0.8872	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.50	0.914
3rd Layer	2.7.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00020443001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (281 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00035470001	SubName- Full=Chromosome chr12 scaffold_78, whole genome shotgun sequence; (497 aa)	•	•	•	•		•	•		0.998
	GSVIVG00024152001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (462 aa)	•						•		0.951
	GSVIVG00026840001	SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (230 aa)							•		0.675
	GSVIVG00024517001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (202 aa)							•		0.653
	GSVIVG00024178001	RecName- Full=Proliferating cell nuclear antigen;; This protein is an auxiliary protein of DNA [...] (266 aa)							•		0.642
	GSVIVG00017986001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (411 aa)	•						•		0.633
	GSVIVG00034771001	RecName- Full=6,7-dimethyl-8-ribityllumazine synthase; EC=2.5.1.9; (185 aa)							•		0.608
	GSVIVG00001917001	SubName- Full=Chromosome chr5 scaffold_124, whole genome shotgun sequence; (381 aa)							•		0.608
	GSVIVG00024638001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (276 aa)	•						•		0.572
	GSVIVG00005777001	SubName- Full=Chromosome chr3 scaffold_158, whole genome shotgun sequence; (214 aa)							•		0.569

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	240
cd01170	242	cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylt	2e-91
PRK09355	263	PRK09355, PRK09355, hydroxyethylthiazole kinase; V	1e-89
COG2145	265	COG2145, ThiM, Hydroxyethylthiazole kinase, sugar	1e-77
pfam02110	246	pfam02110, HK, Hydroxyethylthiazole kinase family	7e-65
TIGR00694	249	TIGR00694, thiM, hydroxyethylthiazole kinase	2e-64
COG0063	284	COG0063, COG0063, Predicted sugar kinase [Carbohyd	3e-05
PRK08573	448	PRK08573, PRK08573, phosphomethylpyrimidine kinase	0.002

>gnl|CDD|238575 cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz

 Score =  268 bits (688), Expect = 2e-91
 Identities = 111/225 (49%), Positives = 145/225 (64%), Gaps = 4/225 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+ VAN LL+ GASP M    EE+ +      AL +N+GTL++  + +M  A + A+QLG
Sbjct: 20  MNFVANVLLAIGASPIMSDAPEEVEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLG 79

Query: 61  KPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDS-SHES 118
           KP VLDPV  GA+ FR     EL+   +PTVIRGNASEI AL+  +    KGVDS S + 
Sbjct: 80  KPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALAGLTGL-GKGVDSSSSDE 138

Query: 119 MDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF 178
            DA+E A+ LA   GA+V V+G VD +TDG RVV   NG P++ KIT TGC + A+IAAF
Sbjct: 139 EDALELAKALARKYGAVVVVTGEVDYITDGERVVVVKNGHPLLTKITGTGCLLGAVIAAF 198

Query: 179 VAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLH 223
           +AV      EA  SA+ VYGIAGE+    AKGP S R+ ++D L+
Sbjct: 199 LAVGD-DPLEAAVSAVLVYGIAGELAAERAKGPGSFRVALLDELY 242

A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. Length = 242

>gnl|CDD|236477 PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated

 Score =  264 bits (678), Expect = 1e-89
 Identities = 109/239 (45%), Positives = 152/239 (63%), Gaps = 4/239 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+  AN LL+ GASPAM H  EE  +      AL +N+GTL+   + +M AA ++A++ G
Sbjct: 25  MNFTANGLLALGASPAMAHAPEEAEEMAKIAGALVINIGTLTEERIEAMLAAGKIANEAG 84

Query: 61  KPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
           KP VLDPV  GA+ +R    LEL+  +KP VIRGNASEI AL+  +   TKGVDS+  S 
Sbjct: 85  KPVVLDPVGVGATSYRTEFALELLAEVKPAVIRGNASEIAALAGEA-AETKGVDSTDGSA 143

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           DA+E A+  A+  G +V V+G VD +TDG RVV  HNG P+M K+T TGC ++A++AAF 
Sbjct: 144 DAVEIAKAAAKKYGTVVVVTGEVDYITDGERVVSVHNGHPLMTKVTGTGCLLSAVVAAFA 203

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMAK-GPASLRMHMIDCLHGLDQAALLSRTNIT 237
           AV+     EA A+A +VYGIAGE+    ++ GP S +   +D L+ L +  +  R  + 
Sbjct: 204 AVEK-DYLEAAAAACAVYGIAGELAAERSEKGPGSFQPAFLDALYQLTEEDIAERAKVE 261

Length = 263

>gnl|CDD|225056 COG2145, ThiM, Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]

 Score =  234 bits (600), Expect = 1e-77
 Identities = 111/238 (46%), Positives = 149/238 (62%), Gaps = 3/238 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
            +  AN LL+ GASP M    EE+ +F     AL +N+GTLSA  + +M+AA + A++ G
Sbjct: 26  QNFTANGLLALGASPVMADAPEEVEEFAKIADALLINIGTLSAERIQAMRAAIKAANESG 85

Query: 61  KPWVLDPVAAGASGFRLNACLELVQL-KPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
           KP VLDPV  GA+ FR    LEL+   KP  IRGNASEI AL+  + G  KGVD+   + 
Sbjct: 86  KPVVLDPVGVGATKFRTKFALELLAEVKPAAIRGNASEIAALAGEAGG-GKGVDAGDGAA 144

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           DA+EAA+  A+  G +V V+G VD ++DG RVV  HNG P++ KIT TGC + A++AAF+
Sbjct: 145 DAIEAAKKAAQKYGTVVVVTGEVDYISDGTRVVVIHNGSPLLGKITGTGCLLGAVVAAFL 204

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMA-KGPASLRMHMIDCLHGLDQAALLSRTNI 236
           AV+     +A A A +VYGIAGE+    A KGP S R   +D L+ L Q  +  R  I
Sbjct: 205 AVEKDPLLDAAAEACAVYGIAGELAAERANKGPGSFRPAFLDALYQLTQEVIKERARI 262

Length = 265

>gnl|CDD|145326 pfam02110, HK, Hydroxyethylthiazole kinase family

 Score =  201 bits (513), Expect = 7e-65
 Identities = 98/230 (42%), Positives = 136/230 (59%), Gaps = 7/230 (3%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
            +  AN LL+ GASP M    EE+ +      AL +N+GTL    + +M AA + A++LG
Sbjct: 20  QNFTANGLLALGASPVMSEAEEEVAELAKIAGALVINIGTLDKERIEAMIAAVKSANELG 79

Query: 61  KPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
            P VLDPV  GA+ FR    LEL++ +    IRGNA EI+AL+    G  +GVDS   + 
Sbjct: 80  VPVVLDPVGVGATKFRTETALELLRSVGVAAIRGNAGEILALAGEE-GLMRGVDSGEGAT 138

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           DA+ AA+  A   G +V V+G VD V+DGRR    HNG  ++ +IT +GC + A++AAF 
Sbjct: 139 DAIRAAQQAARKYGTVVVVTGEVDYVSDGRRTYTIHNGTELLGRITGSGCLLGAVVAAFC 198

Query: 180 AV--DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227
           AV  DPL    A ASA  +Y IAGE+    +KGP S    ++D L+ L +
Sbjct: 199 AVPTDPL---FAAASACVLYKIAGELAAERSKGPGSFHPELLDALYQLTE 245

Length = 246

>gnl|CDD|188074 TIGR00694, thiM, hydroxyethylthiazole kinase

 Score =  200 bits (510), Expect = 2e-64
 Identities = 95/228 (41%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+  AN LL+ GASP M    EE+ +      AL +N+GTL    + +M AA + A++LG
Sbjct: 20  MNFTANGLLALGASPVMSEAEEEVAELAKIAGALVINIGTLDKESIEAMIAAGKSANELG 79

Query: 61  KPWVLDPVAAGASGFRLNACLELV-QLKPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
           KP VLDPV  GA+ FR    LEL+ + +   I+GNA EI AL+    G  +GVDS   + 
Sbjct: 80  KPVVLDPVGVGATKFRTETSLELLSEGRVAAIKGNAGEIAALAGEE-GKMRGVDSGEGAE 138

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           DA+ AA+  A   G +V V+G VD V+DGRRV   HNG  ++ K+T +GC + +++AAF 
Sbjct: 139 DAIRAAQQAAREYGTVVVVTGEVDYVSDGRRVYTIHNGTELLGKVTGSGCLLGSVVAAFC 198

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227
           AV      +A  SA  +Y IAGE+    +KGP S  + ++D L  L +
Sbjct: 199 AV-EEDPLDAAISACLLYKIAGELAAERSKGPGSFHVELLDALSQLTE 245

This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]. Length = 249

>gnl|CDD|223141 COG0063, COG0063, Predicted sugar kinase [Carbohydrate transport and metabolism]

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDG-RRVVGAHNGVPMMQKITA-TGCSVTALIAA 177
           D +EAAR LA   GA+V + GAV ++ D    V     G P M   T  TG  +  +I A
Sbjct: 177 DRLEAARELAAKYGAVVVLKGAVTVIADPDGEVFVNPTGNPGM--ATGGTGDVLAGIIGA 234

Query: 178 FVAVDPLHAFEATASALSVYGIAGE 202
            +A  P    EA A+   ++G AGE
Sbjct: 235 LLAQGPADPLEAAAAGAWLHGRAGE 259

Length = 284

>gnl|CDD|236297 PRK08573, PRK08573, phosphomethylpyrimidine kinase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 44/186 (23%)

Query: 49  MKAAAQLASQLGKPWVLDPVAAGASGFRL------NACLELVQLKPTVIRGNASEIIALS 102
           ++A A+  S+ G P V+DPV    SG  L      +A ++ +    TV+  N  E   L+
Sbjct: 86  IEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLT 145

Query: 103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAV--------SGAVDIVTDGRRVVGA 154
              +   + V+      DA +AA+ + E  GA   V          AVD++         
Sbjct: 146 GMKI---RSVE------DARKAAKYIVEELGAEAVVVKGGHLEGEEAVDVLY-------- 188

Query: 155 HNG------VPMMQKIT--ATGCSVTALIAAFVA--VDPLHAFEATASALSVYGIAGEMG 204
           HNG       P ++      TGCS +A IAA +A  +DP  A + TA       I    G
Sbjct: 189 HNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGLDPEEAIK-TAKKFITMAIK--YG 245

Query: 205 MSMAKG 210
           + + KG
Sbjct: 246 VKIGKG 251

Length = 448

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
COG2145	265	ThiM Hydroxyethylthiazole kinase, sugar kinase fam	100.0
TIGR00694	249	thiM hydroxyethylthiazole kinase. This model repre	100.0
PRK09355	263	hydroxyethylthiazole kinase; Validated	100.0
PF02110	246	HK: Hydroxyethylthiazole kinase family; InterPro:	100.0
cd01170	242	THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T	100.0
PF01256	242	Carb_kinase: Carbohydrate kinase; InterPro: IPR000	99.96
PRK10565	508	putative carbohydrate kinase; Provisional	99.95
cd01171	254	YXKO-related B.subtilis YXKO protein of unknown fu	99.95
TIGR00196	272	yjeF_cterm yjeF C-terminal region, hydroxyethylthi	99.95
COG0063	284	Predicted sugar kinase [Carbohydrate transport and	99.94
COG0351	263	ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi	99.94
PF08543	246	Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte	99.9
TIGR00097	254	HMP-P_kinase phosphomethylpyrimidine kinase. This	99.9
KOG3974	306	consensus Predicted sugar kinase [Carbohydrate tra	99.89
COG1105	310	FruK Fructose-1-phosphate kinase and related fruct	99.88
PRK12616	270	pyridoxal kinase; Reviewed	99.88
PRK12412	268	pyridoxal kinase; Reviewed	99.87
cd01169	242	HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim	99.87
PRK06427	266	bifunctional hydroxy-methylpyrimidine kinase/ hydr	99.87
PTZ00493	321	phosphomethylpyrimidine kinase; Provisional	99.86
cd01173	254	pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla	99.85
PRK07105	284	pyridoxamine kinase; Validated	99.84
PRK08176	281	pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy	99.83
PLN02898	502	HMP-P kinase/thiamin-monophosphate pyrophosphoryla	99.83
PRK08573	448	phosphomethylpyrimidine kinase; Provisional	99.83
PRK05756	286	pyridoxamine kinase; Validated	99.82
PTZ00347	504	phosphomethylpyrimidine kinase; Provisional	99.82
PRK12413	253	phosphomethylpyrimidine kinase; Provisional	99.81
PRK14713	530	multifunctional hydroxymethylpyrimidine phosphokin	99.79
PRK09517	755	multifunctional thiamine-phosphate pyrophosphoryla	99.79
KOG2598	523	consensus Phosphomethylpyrimidine kinase [Coenzyme	99.79
TIGR00687	286	pyridox_kin pyridoxal kinase. ThiD and related pro	99.78
PRK10294	309	6-phosphofructokinase 2; Provisional	99.77
PLN02978	308	pyridoxal kinase	99.76
TIGR03828	304	pfkB 1-phosphofructokinase. This enzyme acts in co	99.76
TIGR03168	303	1-PFK hexose kinase, 1-phosphofructokinase family.	99.76
PRK13508	309	tagatose-6-phosphate kinase; Provisional	99.75
cd01164	289	FruK_PfkB_like 1-phosphofructokinase (FruK), minor	99.75
TIGR01231	309	lacC tagatose-6-phosphate kinase. This enzyme is p	99.75
PRK09513	312	fruK 1-phosphofructokinase; Provisional	99.74
COG2870	467	RfaE ADP-heptose synthase, bifunctional sugar kina	99.73
cd01174	292	ribokinase Ribokinase catalyses the phosphorylatio	99.73
PTZ00344	296	pyridoxal kinase; Provisional	99.72
COG2240	281	PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe	99.72
TIGR02198	315	rfaE_dom_I rfaE bifunctional protein, domain I. Rf	99.71
cd01166	294	KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho	99.7
PRK11142	306	ribokinase; Provisional	99.7
TIGR02152	293	D_ribokin_bact ribokinase. This model describes ri	99.69
cd01172	304	RfaE_like RfaE encodes a bifunctional ADP-heptose	99.69
PTZ00247	345	adenosine kinase; Provisional	99.69
cd01168	312	adenosine_kinase Adenosine kinase (AK) catalyzes t	99.68
PRK09850	313	pseudouridine kinase; Provisional	99.68
PLN02341	470	pfkB-type carbohydrate kinase family protein	99.66
PTZ00292	326	ribokinase; Provisional	99.66
cd00287	196	ribokinase_pfkB_like ribokinase/pfkB superfamily:	99.66
PRK09954	362	putative kinase; Provisional	99.66
KOG2599	308	consensus Pyridoxal/pyridoxine/pyridoxamine kinase	99.65
PRK11316	473	bifunctional heptose 7-phosphate kinase/heptose 1-	99.63
cd01167	295	bac_FRK Fructokinases (FRKs) mainly from bacteria	99.62
PLN02813	426	pfkB-type carbohydrate kinase family protein	99.61
cd01941	288	YeiC_kinase_like YeiC-like sugar kinase. Found in	99.61
PF00294	301	PfkB: pfkB family carbohydrate kinase; InterPro: I	99.6
PLN02548	332	adenosine kinase	99.59
PLN02379	367	pfkB-type carbohydrate kinase family protein	99.59
cd01946	277	ribokinase_group_C Ribokinase-like subgroup C. Fou	99.56
cd01945	284	ribokinase_group_B Ribokinase-like subgroup B. Fou	99.55
PLN02323	330	probable fructokinase	99.54
cd01944	289	YegV_kinase_like YegV-like sugar kinase. Found onl	99.52
PRK09434	304	aminoimidazole riboside kinase; Provisional	99.5
cd01940	264	Fructoselysine_kinase_like Fructoselysine kinase-l	99.45
cd01943	328	MAK32 MAK32 kinase. MAK32 is a protein found prima	99.44
cd01942	279	ribokinase_group_A Ribokinase-like subgroup A. Fou	99.44
PRK15074	434	inosine/guanosine kinase; Provisional	99.43
COG0524	311	RbsK Sugar kinases, ribokinase family [Carbohydrat	99.41
cd01937	254	ribokinase_group_D Ribokinase-like subgroup D. Fou	99.38
PLN02967	581	kinase	99.35
cd01947	265	Guanosine_kinase_like Guanosine kinase-like sugar	99.33
PLN02630	335	pfkB-type carbohydrate kinase family protein	99.26
PLN02543	496	pfkB-type carbohydrate kinase family protein	99.24
PRK09813	260	fructoselysine 6-kinase; Provisional	99.24
cd01939	290	Ketohexokinase Ketohexokinase (fructokinase, KHK)	99.21
KOG2854	343	consensus Possible pfkB family carbohydrate kinase	99.03
KOG2855	330	consensus Ribokinase [Carbohydrate transport and m	98.96
KOG3009	614	consensus Predicted carbohydrate kinase, contains	95.49
KOG2947	308	consensus Carbohydrate kinase [Carbohydrate transp	95.11
PRK03979	463	ADP-specific phosphofructokinase; Provisional	89.18

>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]

Probab=100.00  E-value=4.6e-45  Score=295.48  Aligned_cols=237  Identities=46%  Similarity=0.699  Sum_probs=222.9

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      +||+||++|++|+||+|++.++|++++.+.+|+++|+.|.++++.++.+..+++.+++.++|+||||++.+.+.+|.+..
T Consensus        26 ~nftAN~lLAlGaSP~Ma~~~eE~~e~~kia~AL~INIGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt~~R~~~~  105 (265)
T COG2145          26 QNFTANGLLALGASPVMADAPEEVEEFAKIADALLINIGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGATKFRTKFA  105 (265)
T ss_pred             hhcchHHHHHcCCCchhccCHHHHHHHHHhccceEEeeccCChHHHHHHHHHHHHHHhcCCCEEecCccCCchHHHHHHH
Confidence            58999999999999999999999999999999999999999999899999999999999999999999999999999888


Q ss_pred             HHHhcc-CCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQL-KPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~~-~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      +++++. ++++|+.|.+|...|.|... ..+|+|+.....+..+.++.++++++++|++||..|++.|+++++.+.++.+
T Consensus       106 ~~LL~~~~~~~IrGN~sEI~~Lag~~~-~~kGVDa~~~~~~~~~~a~~~A~~~~~vvvvTG~vD~Isdg~~~~~i~nG~p  184 (265)
T COG2145         106 LELLAEVKPAAIRGNASEIAALAGEAG-GGKGVDAGDGAADAIEAAKKAAQKYGTVVVVTGEVDYISDGTRVVVIHNGSP  184 (265)
T ss_pred             HHHHHhcCCcEEeccHHHHHHHhcccc-cccccccccchhhHHHHHHHHHHHhCcEEEEECCeeEEEcCCeEEEEECCCc
Confidence            999984 59999999999999999876 7789997566778999999999999999999999999999999999999999


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHHHhhhhhC-CCccccHHHHHHHHhcCCHHHHhcccccc
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLH-AFEATASALSVYGIAGEMGMSMA-KGPASLRMHMIDCLHGLDQAALLSRTNIT  237 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~-~~~A~~~A~~~~~~a~~~a~~~~-~~~g~~~~~~~~~l~~~~~~~~~~~~~~~  237 (240)
                      .+.+++|+||.+++++|+|++.. .+ +++|+..|+.+.+.|++.++++. .+||+|...++|.|+++..+++..++++|
T Consensus       185 ll~~ItGtGCllgav~aaF~av~-~d~~~~A~~~A~~~~~iAge~A~~~~~~gpGsF~~~flD~L~~l~~E~i~~~~~~e  263 (265)
T COG2145         185 LLGKITGTGCLLGAVVAAFLAVE-KDPLLDAAAEACAVYGIAGELAAERANKGPGSFRPAFLDALYQLTQEVIKERARIE  263 (265)
T ss_pred             HHhhhhccccHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHhcCHHHHHHhhhhc
Confidence            99999999999999999999985 67 68999999999999999999986 69999999999999999999999999998


Q ss_pred             cc
Q 026308          238 AL  239 (240)
Q Consensus       238 ~~  239 (240)
                      ++
T Consensus       264 ~~  265 (265)
T COG2145         264 EV  265 (265)
T ss_pred             cC
Confidence            74

>TIGR00694 thiM hydroxyethylthiazole kinase

Probab=100.00  E-value=2.1e-43  Score=294.67  Aligned_cols=228  Identities=40%  Similarity=0.625  Sum_probs=197.2

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      ++++||++|++|++|+|+++++|+.++++.+|++++++|+++++..+.+..+++.++++++|+|+||++.+.++++....
T Consensus        20 ~~~~An~~la~g~sp~m~~~~~e~~~~~~~~~al~ik~G~l~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~~r~~~~   99 (249)
T TIGR00694        20 QNFTANGLLALGASPVMSEAEEEVAELAKIAGALVINIGTLDKESIEAMIAAGKSANELGVPVVLDPVGVGATKFRTETA   99 (249)
T ss_pred             hhhhHHHHHHcCCChhhcCCHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHHHHHHhcCCCEEEcccccccchhHHHHH
Confidence            58999999999999999999999999999999999999998777777888888888888999999999998888776555


Q ss_pred             HHHhc-cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~-~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      +++++ .++++||||..|+++|+|... ..+|+|.....++..+.+++|++++++.|++||..|+++++++.+.+..+.+
T Consensus       100 ~~Ll~~~~~~vITpN~~E~~~L~g~~~-~~~gvd~~~~~~d~~~~a~~la~~~~~~VllkG~~D~i~~~~~~~~~~~g~~  178 (249)
T TIGR00694       100 LELLSEGRFAAIRGNAGEIASLAGETG-LMKGVDSGEGAADAIRAAQQAAQKYGTVVVITGEVDYVSDGTSVYTIHNGTE  178 (249)
T ss_pred             HHHHhhcCCceeCCCHHHHHHHhCCCC-CCCCcCCccchHHHHHHHHHHHHHhCCEEEEECCCcEEEeCCEEEEECCCCh
Confidence            55664 357999999999999999652 2244453334567888999999999889999999999998888777766677


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHH
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAAL  230 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~  230 (240)
                      .+.+++|+||+|+|+||++++++ .++.+|+..|..+++.|++.+.++..++|++..+++|.|+.+..+++
T Consensus       179 ~~~~~~GtGc~LssaIaa~LA~g-~~~~~A~~~A~~~~~~a~~~a~~~~~g~g~~~~~l~d~l~~~~~~~~  248 (249)
T TIGR00694       179 LLGKITGSGCLLGSVVAAFCAVE-EDPLDAAISACLLYKIAGELAAERSKGPGSFQIELLDALSQLTEEVI  248 (249)
T ss_pred             HHhCCccchHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHHccCHHhc
Confidence            77777999999999999999996 79999999999999999999887656899999999999999988765

This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE.

>PRK09355 hydroxyethylthiazole kinase; Validated

Probab=100.00  E-value=5.8e-43  Score=294.16  Aligned_cols=237  Identities=46%  Similarity=0.725  Sum_probs=205.8

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      ++++||++|++|++|+|+++++|+.++++.+|++++++|++++...+.+..+++.++++++|+||||++.+.+.++.+..
T Consensus        25 ~~~~An~~la~g~sp~m~~~~~e~~~~~~~~~alvi~~G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~  104 (263)
T PRK09355         25 MNFTANGLLALGASPAMAHAPEEAEEMAKIAGALVINIGTLTEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFA  104 (263)
T ss_pred             hhhHHHHHHHhCCCcccCCCHHHHHHHHHhcCceEEeCCCCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcchhhHHHH
Confidence            58999999999999999999999999999999999999999777677777777778899999999999988777765555


Q ss_pred             HHHhc-cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~-~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      +++++ .++++||||..|+++|+|.+. ..+++|...+.+++.+.+++|++++++.|++||..++++++++.+.+..+.+
T Consensus       105 ~~ll~~~~~~vItPN~~E~~~L~g~~~-~~~~vd~~~~~~~~~~~a~~la~~~~~~VvvkG~~d~I~~~~~~~~~~~g~~  183 (263)
T PRK09355        105 LELLAEVKPAVIRGNASEIAALAGEAA-ETKGVDSTDGSADAVEIAKAAAKKYGTVVVVTGEVDYITDGERVVSVHNGHP  183 (263)
T ss_pred             HHHHHhcCCcEecCCHHHHHHHhCCCc-ccCCcCCCCCHHHHHHHHHHHHHHhCCEEEEECCCcEEEeCCEEEEEeCCCc
Confidence            55664 468999999999999999753 2344443334567888999999999999999999999999888777776667


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCC-CccccHHHHHHHHhcCCHHHHhccccccc
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAK-GPASLRMHMIDCLHGLDQAALLSRTNITA  238 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~-~~g~~~~~~~~~l~~~~~~~~~~~~~~~~  238 (240)
                      .+.+++|+||+|+|++|++++++ .++.+|+..|+.+++.|++.+.++.. |+|++..+++|+|+.+..+++.+..++++
T Consensus       184 ~~~~v~GtGc~L~~~iaa~lA~g-~~~~~A~~~A~~~~~~a~~~a~~~~~~g~gsf~~~l~d~l~~~~~~~~~~~~~~~~  262 (263)
T PRK09355        184 LMTKVTGTGCLLSAVVAAFAAVE-KDYLEAAAAACAVYGIAGELAAERSEKGPGSFQPAFLDALYQLTEEDIAERAKVEE  262 (263)
T ss_pred             ccCCcccccHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHhhCCHHHHHhhcCeee
Confidence            77888999999999999999996 79999999999999999999887645 89999999999999999999999999886


Q ss_pred             c
Q 026308          239 L  239 (240)
Q Consensus       239 ~  239 (240)
                      +
T Consensus       263 ~  263 (263)
T PRK09355        263 V  263 (263)
T ss_pred             C
Confidence            4

>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []

Probab=100.00  E-value=6.5e-43  Score=286.65  Aligned_cols=225  Identities=48%  Similarity=0.729  Sum_probs=203.0

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      ++|+||++|++|++|+|+++++|+.++.+.+++++|+.|.+++++.+.+..+.+.+++.++|+||||++.+.+.+|.+..
T Consensus        20 ~n~~AN~~LA~GasPiMa~~~~E~~e~~~~a~al~iNiGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGas~~R~~~~   99 (246)
T PF02110_consen   20 ANDVANALLAIGASPIMAEAPEEVEEFASIADALVINIGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGASKFRTEFA   99 (246)
T ss_dssp             HHHHHHHHHHCTSEEEE--STTTHHHHHHCTSEEEEESTTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHH
T ss_pred             hhhHHHHHHHcCCCccccCCHHHHHHHHHHcCEEEEECCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCCcHHHHHHH
Confidence            47999999999999999999999999999999999999999998899999999999999999999999999999999888


Q ss_pred             HHHhc-cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~-~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      +++++ .++++|+.|..|...|.|... ..+|+|...+..+..+.+++|+++++++|++||..|++.++++++.++++.+
T Consensus       100 ~~LL~~~~~~vIrGN~sEI~aLag~~~-~~kGVDs~~~~~~~~~~a~~lA~k~~~vVvvTG~~D~Isdg~~~~~i~nG~~  178 (246)
T PF02110_consen  100 LELLNNYKPTVIRGNASEIAALAGEDS-KAKGVDSGDSDEDAIEAAKQLAQKYNCVVVVTGEVDYISDGNRVYRIPNGSP  178 (246)
T ss_dssp             HHHHCHS--SEEEEEHHHHHHHHTCCC-CSCSSSSSCGSHHHHHHHHHHHHHTTSEEEEESSSEEEEESSCEEEECSSSG
T ss_pred             HHHHHhCCCcEEEeCHHHHHHHhCcCC-CCCCcCcCCcchHHHHHHHHHHHhcCCEEEEecCCcEEECCCeEEEeCCCCh
Confidence            99995 789999999999999999875 7789997555566789999999999999999999999999999999999999


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ  227 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~  227 (240)
                      .+.+++|+||++++++|+|++.. .++++|+..|+.+.+.|++.+.++..|+|+|...++|.|+.+.+
T Consensus       179 ~l~~itGtGC~lgaliaaf~av~-~d~~~aa~~a~~~~~~Age~A~~~~~gpGSF~~~llD~L~~l~~  245 (246)
T PF02110_consen  179 LLSKITGTGCMLGALIAAFLAVA-EDPLEAAVAAVALYGIAGELAAEKSNGPGSFRVALLDALYNLTE  245 (246)
T ss_dssp             GGGGSTTHHHHHHHHHHHHHCCC-SSHHHHHHHHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHH
T ss_pred             HhcceeccchHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHHhcCcC
Confidence            99999999999999999999985 68999999999999999999998878999999999999998754

Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....

>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz

Probab=100.00  E-value=6.7e-37  Score=254.32  Aligned_cols=221  Identities=50%  Similarity=0.727  Sum_probs=183.2

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      |+++|+++|++|++++|.+.++++.+.++++|++++++|++.+...+.+..+++.+++.++|+|+||++.+..+++.+..
T Consensus        20 ~~~~a~~~~~~g~~~~~~~~~e~~~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~   99 (242)
T cd01170          20 MNFVANVLLAIGASPIMSDAPEEVEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVA   99 (242)
T ss_pred             HhHHHHHHHHhCCchhhcCCHHHHHHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHH
Confidence            57899999999999999998889999999999999999998766667777777788889999999999877655543333


Q ss_pred             HHHhcc-CCeEEcCCHHHHHHHHcCCCCCCcCCCCCCC-hHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCC
Q 026308           81 LELVQL-KPTVIRGNASEIIALSRASVGPTKGVDSSHE-SMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGV  158 (240)
Q Consensus        81 ~~~~~~-~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~-~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~  158 (240)
                      .+++.. ++++||||..|+++|+|.+. ..++++.... .+++.+++++|++++++.|++||..++++++++.++++.+.
T Consensus       100 ~~ll~~~~~~ilTPN~~Ea~~L~g~~~-~~~~~~~~~~~~~~~~~aa~~l~~~~~~~VllkG~~d~l~~~~~~~~~~~~~  178 (242)
T cd01170         100 KELLAEGQPTVIRGNASEIAALAGLTG-LGKGVDSSSSDEEDALELAKALARKYGAVVVVTGEVDYITDGERVVVVKNGH  178 (242)
T ss_pred             HHHHhcCCCeEEcCCHHHHHHHhCCCC-CcCcccCCCcchHHHHHHHHHHHHHhCCEEEEECCCcEEEECCEEEEEeCCC
Confidence            455543 58999999999999999764 1111111011 56788899999999988899999989988877788777655


Q ss_pred             ccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHh
Q 026308          159 PMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLH  223 (240)
Q Consensus       159 ~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~  223 (240)
                      +.+.+++|+||+|+|++|++++++ .++.+|+..|..++..+++.+.+...|+|+++.+++|.||
T Consensus       179 ~~~~~v~GtGdtLa~aiAa~LA~g-~~~~~A~~~A~~~~~~a~~~a~~~~~~~~~~~~~l~d~l~  242 (242)
T cd01170         179 PLLTKITGTGCLLGAVIAAFLAVG-DDPLEAAVSAVLVYGIAGELAAERAKGPGSFRVALLDELY  242 (242)
T ss_pred             ccccCCCchHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHhhC
Confidence            666667999999999999999996 8999999999999999999888765679999999999986

A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.

>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase

Probab=99.96  E-value=2.5e-28  Score=202.22  Aligned_cols=179  Identities=27%  Similarity=0.336  Sum_probs=137.9

Q ss_pred             hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHH-h-ccCCeEEcCCHHHHHHH
Q 026308           24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLEL-V-QLKPTVIRGNASEIIAL  101 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~-~-~~~~~vitPN~~E~~~L  101 (240)
                      +.+.++++|+++||||+-.+..   ...+++...+...|+|+|++++..       .... . ...+.|+|||..|+++|
T Consensus        61 ~~~~~~~~~av~iGPGlg~~~~---~~~~~~~~~~~~~p~VlDADaL~~-------l~~~~~~~~~~~IlTPH~gE~~rL  130 (242)
T PF01256_consen   61 ILELLEKADAVVIGPGLGRDEE---TEELLEELLESDKPLVLDADALNL-------LAENPKKRNAPVILTPHPGEFARL  130 (242)
T ss_dssp             HHHHHCH-SEEEE-TT-SSSHH---HHHHHHHHHHHCSTEEEECHHHHC-------HHHCCCCSSSCEEEE-BHHHHHHH
T ss_pred             hHhhhccCCEEEeecCCCCchh---hHHHHHHHHhhcceEEEehHHHHH-------HHhccccCCCCEEECCCHHHHHHH
Confidence            4456789999999999843322   234555556678899999999432       1121 1 14689999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEc-CcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTD-GRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      ++...         ...++..+.+++++++++++||+||..+++++ ++++|.++.+++.+.. .|+||+|+|+|+++++
T Consensus       131 ~~~~~---------~~~~~~~~~a~~~a~~~~~~vvLKG~~t~I~~p~~~~~~n~~gn~~la~-gGsGDvLaGii~~lla  200 (242)
T PF01256_consen  131 LGKSV---------EIQEDRIEAAREFAKEYGAVVVLKGAVTIIASPGGRVYVNPTGNPGLAT-GGSGDVLAGIIAGLLA  200 (242)
T ss_dssp             HTTTC---------HHCCSHHHHHHHHHHHHTSEEEEESTSSEEEEETSEEEEE----GGGSS-TTHHHHHHHHHHHHHH
T ss_pred             hCCcc---------cchhhHHHHHHHHHhhcCcEEEEeCCCcEEEecCcceeEeCCCCCCCCC-CCcccHHHHHHHHHHH
Confidence            99764         12356788999999999999999999999877 7788888888899886 9999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhc
Q 026308          181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHG  224 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~  224 (240)
                      ++ .++.+|+..|+++|++|++.+.++ .+.|+++.|+++.|++
T Consensus       201 q~-~~~~~Aa~~av~lHg~Ag~~~~~~-~~~~~~a~dli~~iP~  242 (242)
T PF01256_consen  201 QG-YDPFEAACLAVYLHGRAGDLAAEK-YGRGMLASDLIDNIPK  242 (242)
T ss_dssp             HT-SSHHHHHHHHHHHHHHHHHHHCTT-CSSC--HHHHHHHHHH
T ss_pred             cc-CCHHHHHHHHHHHHHHHHHHHHHh-CCCcCcHHHHHHhcCC
Confidence            96 899999999999999999999987 5669999999999974

Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A ....

>PRK10565 putative carbohydrate kinase; Provisional

Probab=99.95  E-value=9.2e-27  Score=211.57  Aligned_cols=199  Identities=18%  Similarity=0.241  Sum_probs=154.5

Q ss_pred             ccCCC--CCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcC
Q 026308           16 AMLHT--IEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRG   93 (240)
Q Consensus        16 ~~~~~--~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitP   93 (240)
                      +|...  .+++.++++++|++++|+|+..++..   ..+++.+++.++|+||||++.......    +. . ..+.||||
T Consensus       304 ~~~~~~~~~~~~~~~~~~~a~viGpGlg~~~~~---~~~~~~~~~~~~P~VLDAdaL~ll~~~----~~-~-~~~~VLTP  374 (508)
T PRK10565        304 LMVHELTPDSLEESLEWADVVVIGPGLGQQEWG---KKALQKVENFRKPMLWDADALNLLAIN----PD-K-RHNRVITP  374 (508)
T ss_pred             eEEecCCHhHHHHHhhcCCEEEEeCCCCCCHHH---HHHHHHHHhcCCCEEEEchHHHHHhhC----cc-c-cCCeEECC
Confidence            55532  34566677889999999999755432   344466677889999999993210000    00 1 13689999


Q ss_pred             CHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcC-cEEEEEecCCccCCCccchhhHHH
Q 026308           94 NASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDG-RRVVGAHNGVPMMQKITATGCSVT  172 (240)
Q Consensus        94 N~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~-~~~~~~~~~~~~~~~~~GaGD~la  172 (240)
                      |..|+++|++...   +     .-..+..+.+++++++++++||+||..++|+++ +.++.++.+.+.+.+ +|+||+|+
T Consensus       375 h~gE~~rL~~~~~---~-----~v~~~~~~~a~~~a~~~~~~vvlKG~~~iI~~~~~~~~~~~~G~~~ma~-~GsGDvLa  445 (508)
T PRK10565        375 HPGEAARLLGCSV---A-----EIESDRLLSARRLVKRYGGVVVLKGAGTVIAAEPDALAIIDVGNAGMAS-GGMGDVLS  445 (508)
T ss_pred             CHHHHHHHhCCCh---h-----hhhhhHHHHHHHHHHHhCCEEEEeCCCcEEEcCCceEEEECCCCCCCCC-CChHHHHH
Confidence            9999999998543   1     111256678889999999999999999999875 567888888888887 99999999


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhcc
Q 026308          173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSR  233 (240)
Q Consensus       173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~~  233 (240)
                      |+|+++++++ .++.+|+..|+++|+.|++.++++..++|+++.+++|.|+.+.+.+|...
T Consensus       446 GiIaalla~g-~~~~~Aa~~a~~lhg~Ag~~a~~~~~~~g~~a~dlid~L~~~~~~~~~~~  505 (508)
T PRK10565        446 GIIGALLGQK-LSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVIDK  505 (508)
T ss_pred             HHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHhHhhccc
Confidence            9999999996 89999999999999999998876534689999999999999888777643

>cd01171 YXKO-related B

Probab=99.95  E-value=3.9e-26  Score=191.45  Aligned_cols=183  Identities=23%  Similarity=0.249  Sum_probs=139.3

Q ss_pred             hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308           24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      +.+.+.+.|++++|+|+++.   +.+..+++.+++++.|+|+||++........   ...+..++++||||..|+++|+|
T Consensus        71 ~~~~~~~~d~v~ig~gl~~~---~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~~---~~~~~~~~~iltPn~~E~~~L~g  144 (254)
T cd01171          71 LLELLERADAVVIGPGLGRD---EEAAEILEKALAKDKPLVLDADALNLLADEP---SLIKRYGPVVLTPHPGEFARLLG  144 (254)
T ss_pred             HHhhhccCCEEEEecCCCCC---HHHHHHHHHHHhcCCCEEEEcHHHHHhhcCh---hhhccCCCEEECCCHHHHHHHhC
Confidence            34566789999999998654   4567788888888999999999832111110   00122468999999999999999


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                      .+.      +  ...+++.+.++++.++++..||+||..++++++++.+++........+++|+||+|+|+++++++++ 
T Consensus       145 ~~~------~--~~~~~~~~~a~~l~~~~~~~vvlkG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g-  215 (254)
T cd01171         145 ALV------E--EIQADRLAAAREAAAKLGATVVLKGAVTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQG-  215 (254)
T ss_pred             CCh------h--hhhhHHHHHHHHHHHHcCcEEEEcCCCCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcC-
Confidence            764      0  1234567888999998888889999888888764444444333334457999999999999999996 


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCL  222 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l  222 (240)
                      .++.+|+++|+.+++.|++.+.++ .+.+..+.++++.+
T Consensus       216 ~~~~eA~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~~~  253 (254)
T cd01171         216 LSPLEAAALAVYLHGLAGDLAAKK-KGAGLTAADLVAEI  253 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHH-cCCCcCHHHHHhhc
Confidence            899999999999999999988775 56788888888775

subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.

>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related

Probab=99.95  E-value=4.7e-26  Score=192.80  Aligned_cols=191  Identities=20%  Similarity=0.258  Sum_probs=147.9

Q ss_pred             ccCCCC----CchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEE
Q 026308           16 AMLHTI----EEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVI   91 (240)
Q Consensus        16 ~~~~~~----~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vi   91 (240)
                      +|....    +++.+.++.+|++++++|++++..   +..+++.+++.+.|+|+||++..   +.  ........++++|
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~davvig~Gl~~~~~---~~~l~~~~~~~~~pvVlDa~g~~---l~--~~~~~~~~~~~vI  145 (272)
T TIGR00196        74 LIVHRLGWKVDEDEELLERYDVVVIGPGLGQDPS---FKKAVEEVLELDKPVVLDADALN---LL--TYDKPKREGEVIL  145 (272)
T ss_pred             EEEecchhhHHHHHhhhccCCEEEEcCCCCCCHH---HHHHHHHHHhcCCCEEEEhHHHH---HH--hhcccccCCCEEE
Confidence            666543    244556678999999999876543   57788888888999999998721   11  0000112468999


Q ss_pred             cCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcC-cEEEEEecCCccCCCccchhhH
Q 026308           92 RGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDG-RRVVGAHNGVPMMQKITATGCS  170 (240)
Q Consensus        92 tPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~-~~~~~~~~~~~~~~~~~GaGD~  170 (240)
                      |||..|+++|+|.+.         .+.+++.+++++|+++++++|++||..++++++ +..|..+.+.+. .+++|+||+
T Consensus       146 tPN~~El~~L~g~~~---------~~~~~~~~aa~~l~~~~~~vVv~kG~~~~i~~~~~~~~~~~~~~~~-~~~~GaGD~  215 (272)
T TIGR00196       146 TPHPGEFKRLLGLVN---------EIQGDRLEAAQDIAQKLQAVVVLKGAADVIAAPDGDLWINKTGNAA-LAKGGTGDV  215 (272)
T ss_pred             CCCHHHHHHHhCCch---------hhhhhHHHHHHHHHHHhCCEEEEcCCCCEEEcCCCeEEEECCCCCc-cCCCCchHH
Confidence            999999999999754         345678899999999988889999999888765 456666544444 346999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCC-ccccHHHHHHHHhcCC
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKG-PASLRMHMIDCLHGLD  226 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~-~g~~~~~~~~~l~~~~  226 (240)
                      |+|+++++++++ .++.+|+..|+.++..|++.+.++ .| .+..+.|+++.|+.++
T Consensus       216 lag~iaa~la~g-~~~~~A~~~a~~~~~~a~~~~~~~-~g~~~~~~~dl~~~i~~~~  270 (272)
T TIGR00196       216 LAGLIGGLLAQN-LDPFDAACNAAFAHGLAGDLALKN-HGAYGLTALDLIEKIPRVC  270 (272)
T ss_pred             HHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHh-cCCCCcCHHHHHHHHHHHH
Confidence            999999999996 899999999999999999988775 44 6788999999998654

The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.

>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism]

Probab=99.94  E-value=4.9e-26  Score=191.32  Aligned_cols=181  Identities=27%  Similarity=0.345  Sum_probs=141.9

Q ss_pred             hcccCcEEEecCCC-CCChHHHHHHHHHHHHhcC-CCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           28 TPHVRALYVNVGTL-SANWLPSMKAAAQLASQLG-KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        28 ~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      .++.|++++|+|+- .++..+.+.+++    +.. +|+|+|++++....    ....+...+..|+|||..|+++|++.+
T Consensus        99 ~~~~~avviGpGlG~~~~~~~~~~~~l----~~~~~p~ViDADaL~~la----~~~~~~~~~~~VlTPH~gEf~rL~g~~  170 (284)
T COG0063          99 VERADAVVIGPGLGRDAEGQEALKELL----SSDLKPLVLDADALNLLA----ELPDLLDERKVVLTPHPGEFARLLGTE  170 (284)
T ss_pred             hccCCEEEECCCCCCCHHHHHHHHHHH----hccCCCEEEeCcHHHHHH----hCcccccCCcEEECCCHHHHHHhcCCc
Confidence            36799999999994 443444444443    333 89999999943100    011222223489999999999999965


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCc-EEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGR-RVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                      .      +  +...+..+.+++++++++++||+||..++|++++ +.+.++.+++.+.. .|+||+|+|+++++|+++..
T Consensus       171 ~------~--~~~~~r~~~a~~~a~~~~~vvVLKG~~tvI~~~~g~~~~n~~G~~~ma~-GGtGDvLaGii~alLAq~~~  241 (284)
T COG0063         171 V------D--EIEVDRLEAARELAAKYGAVVVLKGAVTVIADPDGEVFVNPTGNPGMAT-GGTGDVLAGIIGALLAQGPA  241 (284)
T ss_pred             c------c--ccccchHHHHHHHHHHcCCEEEEeCCCCEEEcCCCcEEEcCCCCHHhcc-CcchHHHHHHHHHHHhCCCC
Confidence            4      1  3345677889999999999999999999999866 78888888888886 99999999999999998522


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308          185 HAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ  227 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~  227 (240)
                      ++++|+..|+++|+.|++.+.++ .+ ++.+.|+++.++++.+
T Consensus       242 ~~~~Aa~~g~~~h~~ag~la~~~-~g-~~~a~Dl~~~ip~~~~  282 (284)
T COG0063         242 DPLEAAAAGAWLHGRAGELAAKK-HG-GLTATDLIEAIPRALK  282 (284)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhc-cC-CCCHHHHHHHHHHHHh
Confidence            68899999999999999999886 45 8999999999998764

>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]

Probab=99.94  E-value=4.4e-25  Score=181.77  Aligned_cols=166  Identities=30%  Similarity=0.319  Sum_probs=132.5

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcC-CCEEEcccccCCcccch---HHH----HHHhccCCeEEcCCHHHHHH
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLG-KPWVLDPVAAGASGFRL---NAC----LELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~~~~---~~~----~~~~~~~~~vitPN~~E~~~  100 (240)
                      +..++-.++.||+.+.  +.++.+.+.+++++ .|+|+||+++..++..+   +..    ++++ +.++++|||..|++.
T Consensus        69 ~D~~v~avKtGML~~~--eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~Ll-P~a~vvTPNl~EA~~  145 (263)
T COG0351          69 SDIPVDAVKTGMLGSA--EIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELL-PLATVVTPNLPEAEA  145 (263)
T ss_pred             hcCCCCEEEECCcCCH--HHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhh-ccCeEecCCHHHHHH
Confidence            4556667899997543  56677888888888 88999999998876432   222    2344 589999999999999


Q ss_pred             HHcC-CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC------ccEEEcCcEEEEEecCCccCCCccchhhHHHH
Q 026308          101 LSRA-SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA------VDIVTDGRRVVGAHNGVPMMQKITATGCSVTA  173 (240)
Q Consensus       101 L~g~-~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~------~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag  173 (240)
                      |+|. ++         .+.+++.++++.+.+.+...||+||+      .|++++++..+.++.+.....++||+||+|++
T Consensus       146 L~g~~~i---------~~~~d~~~a~~~i~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSa  216 (263)
T COG0351         146 LSGLPKI---------KTEEDMKEAAKLLHELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSA  216 (263)
T ss_pred             HcCCCcc---------CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHH
Confidence            9995 55         57788888888787878888999975      36778877777777665555668999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +|+++|++| +++.+|++.|..|...|++....-
T Consensus       217 AIaa~LA~G-~~l~~AV~~Ak~fv~~AI~~~~~~  249 (263)
T COG0351         217 AIAANLAKG-LSLEEAVKKAKEFVTRAIRDSLAI  249 (263)
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHHhhhccC
Confidence            999999996 899999999999999999955443

>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2

Probab=99.90  E-value=3.4e-22  Score=166.76  Aligned_cols=168  Identities=23%  Similarity=0.260  Sum_probs=116.9

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc---hHH---HHH-HhccCCeEEcCCHHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR---LNA---CLE-LVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~---~~~---~~~-~~~~~~~vitPN~~E~~~L~  102 (240)
                      ..|++.  .|++.+.  +.++.+.+.+++.+.++|+||++.+.++..   .+.   .++ ++ +.+++||||..|++.|+
T Consensus        60 ~~~aik--iG~l~~~--~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Ll-p~AdiitPN~~Ea~~L~  134 (246)
T PF08543_consen   60 KFDAIK--IGYLGSA--EQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELL-PLADIITPNLTEAELLT  134 (246)
T ss_dssp             C-SEEE--E-S-SSH--HHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCG-GG-SEEE-BHHHHHHHH
T ss_pred             cccEEE--EcccCCc--hhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccC-CcCeEEeCCHHHHHHHh
Confidence            455555  6786332  344555566666778999999998765532   112   222 44 48999999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc---------cEEEcCcEEEEEecCCccCCCccchhhHHHH
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV---------DIVTDGRRVVGAHNGVPMMQKITATGCSVTA  173 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~---------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag  173 (240)
                      |.++         .+.+++.+++++|.+.+...||+||..         ++++++++.+.+..+.....+++|+||+|++
T Consensus       135 g~~i---------~~~~~~~~~~~~l~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss  205 (246)
T PF08543_consen  135 GREI---------NSEEDIEEAAKALLALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSS  205 (246)
T ss_dssp             TS-----------SSHHHHHHHHHHHHHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHH
T ss_pred             CCCC---------CChHhHHHHHHHHHHhCCceEEEeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHH
Confidence            9876         577899999999999777889999652         3445666766665443332567999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCcc
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPA  212 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g  212 (240)
                      +++++|++| .++.+|++.|..+...+++.+.+...|.|
T Consensus       206 ~laa~l~~g-~~l~~Av~~A~~~v~~~i~~t~~~g~~~~  243 (246)
T PF08543_consen  206 ALAAFLAKG-YSLEEAVEKAKNFVRRAIKNTIQLGMGAG  243 (246)
T ss_dssp             HHHHHHHTT-SSHHHHHHHHHHHHHHHHHHHHHCTSSS-
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            999999996 89999999999999999998877533433

7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....

>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase

Probab=99.90  E-value=8.3e-22  Score=165.24  Aligned_cols=167  Identities=26%  Similarity=0.281  Sum_probs=126.1

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCC-CEEEcccccCCcccch---HH---H-HHHhccCCeEEcCCHHHH
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK-PWVLDPVAAGASGFRL---NA---C-LELVQLKPTVIRGNASEI   98 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~-~vvlDp~~~~~~~~~~---~~---~-~~~~~~~~~vitPN~~E~   98 (240)
                      +++..++-.++.|++.+.  +.++.+++.+++++. |+|+||++...++...   +.   . .+++ +++++||||..|+
T Consensus        62 ~~~d~~~~aikiG~l~~~--~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll-~~~dvitpN~~Ea  138 (254)
T TIGR00097        62 VFSDIPVDAAKTGMLASA--EIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLL-PLATLITPNLPEA  138 (254)
T ss_pred             HHhCCCCCEEEECCcCCH--HHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhcc-ccccEecCCHHHH
Confidence            344556667788997443  566788888888888 7999999765433211   11   1 1233 4789999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHH
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSV  171 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~l  171 (240)
                      +.|+|.+.         .+.+++.+++++|.+.+...|++||..       ++++++++.++++.++....+++|+||+|
T Consensus       139 ~~L~g~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f  209 (254)
T TIGR00097       139 EALLGTKI---------RTEQDMIKAAKKLRELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTL  209 (254)
T ss_pred             HHHhCCCC---------CCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHH
Confidence            99999765         455678888999987777779999542       35566666666665555555679999999


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          172 TALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       172 ag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      +|+++++++++ .++.+|+++|..+...+.+.+.+
T Consensus       210 ~aalaa~la~g-~~l~eA~~~A~~~~~~~i~~~~~  243 (254)
T TIGR00097       210 SAAIAANLAKG-LSLKEAVKEAKEFVTGAIRYGLN  243 (254)
T ss_pred             HHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999996 89999999999999999987755

This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.

>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]

Probab=99.89  E-value=5.7e-22  Score=160.18  Aligned_cols=198  Identities=15%  Similarity=0.163  Sum_probs=148.2

Q ss_pred             CCCchhhhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCCHHH
Q 026308           20 TIEEIPDFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASE   97 (240)
Q Consensus        20 ~~~~~~~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN~~E   97 (240)
                      .++.+++++++.+++|||+|+ .++...+.+..++++++.+++|+|+|+++++...-+   ...++. +...|+|||..|
T Consensus        91 av~~i~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~---~e~l~~~~~~viLTPNvvE  167 (306)
T KOG3974|consen   91 AVDIIEKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQL---PERLIGGYPKVILTPNVVE  167 (306)
T ss_pred             hHhHHHHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhc---hhhhhccCceeeeCCcHHH
Confidence            344566789999999999999 567677888999999999999999999997643222   223554 345899999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEecCccEEEc-CcEEEEEecCCccCCCccchhhHHHHHH
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVSGAVDIVTD-GRRVVGAHNGVPMMQKITATGCSVTALI  175 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~VvitG~~~~i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~i  175 (240)
                      +++|.+...      +..++.    ...+.|..+ .+..|+-||..|.+.. +.+++..+. .....++.|.||+++|.+
T Consensus       168 FkRLcd~~l------~~~d~~----~~~~~L~~~l~nv~vvqKG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsl  236 (306)
T KOG3974|consen  168 FKRLCDAEL------DKVDSH----SQMQHLAAELMNVTVVQKGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSL  236 (306)
T ss_pred             HHHHHHHhh------ccccch----HHHHHHHHHhcCeEEEEecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHH
Confidence            999998642      111122    233444444 4567888999996654 445555442 445678999999999999


Q ss_pred             HHHHhcC-----CCC--HHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhc
Q 026308          176 AAFVAVD-----PLH--AFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLS  232 (240)
Q Consensus       176 aa~la~~-----~~~--~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~  232 (240)
                      |.|+++.     +.+  .+.|+..++.+..+|...++++ .|+.++..|+.+++..++..++..
T Consensus       237 a~fl~w~k~~~~e~~~~~~~a~~a~s~~vr~a~rlafk~-~gR~ll~~d~~~~v~~i~~~~~~~  299 (306)
T KOG3974|consen  237 ATFLSWAKLLSGEQDSAAFLAAVAGSIMVRRAGRLAFKR-HGRSLLTSDIPEEVGTIFKSEMED  299 (306)
T ss_pred             HHHHHHHHhccCCccchhhhhhhhhHHHHHHHHHhhhhh-cCcccccchhHHHHhhhhhHHhhh
Confidence            9999872     122  5688889999999999999997 788999999999888887766554

>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]

Probab=99.88  E-value=5.9e-21  Score=161.08  Aligned_cols=173  Identities=21%  Similarity=0.136  Sum_probs=139.0

Q ss_pred             hcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           28 TPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        28 ~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      ++..|.||+. |+ |+.-..+.|.++++.+++.++++++|.++        ..+.+.++.+|++||||..|++.|+|.+.
T Consensus       127 l~~~d~Vvls-GSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg--------~~L~~~L~~~P~lIKPN~~EL~~~~g~~~  197 (310)
T COG1105         127 LESDDIVVLS-GSLPPGVPPDAYAELIRILRQQGAKVILDTSG--------EALLAALEAKPWLIKPNREELEALFGREL  197 (310)
T ss_pred             cccCCEEEEe-CCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh--------HHHHHHHccCCcEEecCHHHHHHHhCCCC
Confidence            4568888886 55 66667899999999999999999999998        34456666679999999999999999987


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc-cEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV-DIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~-~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                               .+.+|.++++++|..++-..||++ |+. .++.++++.|+..+++..+.+++|+||++.|.+.+.+.++ .
T Consensus       198 ---------~~~~d~i~~a~~l~~~g~~~ViVSlG~~Gal~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~-~  267 (310)
T COG1105         198 ---------TTLEDVIKAARELLAEGIENVIVSLGADGALLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKG-K  267 (310)
T ss_pred             ---------CChHHHHHHHHHHHHCCCCEEEEEecCcccEEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcC-C
Confidence                     566788999999888887788888 765 4678888899888666677788999999977777777775 8


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhc
Q 026308          185 HAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHG  224 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~  224 (240)
                      ++++++++|+++...++.     ..+.+.+..+.++.++.
T Consensus       268 ~~e~~l~~avA~g~a~~~-----~~~~~~~~~~~~~~~~~  302 (310)
T COG1105         268 SLEEALRFAVACGAAAAS-----QKGTGIPDLDQLKKIYA  302 (310)
T ss_pred             CHHHHHHHHHHHHHHHhh-----cCCCCCCCHHHHHHHhh
Confidence            999999999987554322     24677777766666653

>PRK12616 pyridoxal kinase; Reviewed

Probab=99.88  E-value=1.1e-20  Score=159.83  Aligned_cols=167  Identities=21%  Similarity=0.183  Sum_probs=122.0

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcC-CCEEEcccccCCcc---cchHH---HHHHhccCCeEEcCCHHHHHHH
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLG-KPWVLDPVAAGASG---FRLNA---CLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~---~~~~~---~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      +..+.=.++.|++.+.  +.++.+.+.+++++ .++|+||++.+.++   ...+.   .++.+.+.+++||||..|++.|
T Consensus        71 ~d~~~~aikiG~l~s~--~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L  148 (270)
T PRK12616         71 DGIGVDAMKTGMLPTV--DIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQL  148 (270)
T ss_pred             cCCCCCEEEECCCCCH--HHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHH
Confidence            3333444567887443  55677777777776 47999999965432   12211   2232224789999999999999


Q ss_pred             HcC-CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC-c-------cEEEcCcEEEEEecCCccCCCccchhhHHH
Q 026308          102 SRA-SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA-V-------DIVTDGRRVVGAHNGVPMMQKITATGCSVT  172 (240)
Q Consensus       102 ~g~-~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~-~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~la  172 (240)
                      +|. +.         .+.+++.+++++|.+.+...||+||. .       ++++++++.+.++.+.....+++|+||+|+
T Consensus       149 ~g~~~~---------~~~~~~~~aa~~l~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fs  219 (270)
T PRK12616        149 SGMGEI---------KTVEQMKEAAKKIHELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFS  219 (270)
T ss_pred             cCCCCC---------CCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHH
Confidence            996 33         45677888899998877778999953 2       255666665656655555556799999999


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      ++++++++++ .++.+|+++|..+...+.+.+.+.
T Consensus       220 aalaa~l~~g-~~l~~Av~~A~~~~~~~i~~s~~~  253 (270)
T PRK12616        220 AAVTAELAKG-SEVKEAIYAAKEFITAAIKESFPL  253 (270)
T ss_pred             HHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999996 899999999999999999987664

>PRK12412 pyridoxal kinase; Reviewed

Probab=99.87  E-value=1.6e-20  Score=158.66  Aligned_cols=169  Identities=21%  Similarity=0.167  Sum_probs=123.4

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCC-EEEcccccCCccc---chHH---HH-HHhccCCeEEcCCHHH
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKP-WVLDPVAAGASGF---RLNA---CL-ELVQLKPTVIRGNASE   97 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~-vvlDp~~~~~~~~---~~~~---~~-~~~~~~~~vitPN~~E   97 (240)
                      .+++...+=.++.|++.+.  +.++.+++.+++.+.+ +|+||++.+.++.   ....   .+ +++ +++++||||..|
T Consensus        66 ~l~~d~~~~~ikiG~l~~~--~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll-~~advitpN~~E  142 (268)
T PRK12412         66 TTIEGVGVDALKTGMLGSV--EIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLV-PKALVVTPNLFE  142 (268)
T ss_pred             HHHhCCCCCEEEECCCCCH--HHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhh-ccceEEcCCHHH
Confidence            3344422334446786432  5567788888888775 9999998766542   1111   12 244 489999999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------cEEEcCcEEEEEecCCccCCCccchhh
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------DIVTDGRRVVGAHNGVPMMQKITATGC  169 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~~i~~~~~~~~~~~~~~~~~~~~GaGD  169 (240)
                      ++.|+|.++         .+.+++.+++++|.+.+...|++||..        +++++++..+.++.++....+++|+||
T Consensus       143 a~~L~g~~~---------~~~~~~~~aa~~l~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD  213 (268)
T PRK12412        143 AYQLSGVKI---------NSLEDMKEAAKKIHALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGC  213 (268)
T ss_pred             HHHHhCcCC---------CCHHHHHHHHHHHHhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHH
Confidence            999999765         456788889999988777789999432        244555555556655545556799999


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          170 SVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       170 ~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +|+|++++++++| .++.+|+++|..+...+.+.+.+.
T Consensus       214 ~f~aa~aa~l~~g-~~l~eA~~~A~~~~~~~i~~~~~~  250 (268)
T PRK12412        214 TYSAAITAELAKG-KPVKEAVKTAKEFITAAIRYSFKI  250 (268)
T ss_pred             HHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999996 899999999999999999877664

>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1

Probab=99.87  E-value=1.5e-20  Score=156.38  Aligned_cols=159  Identities=26%  Similarity=0.256  Sum_probs=116.0

Q ss_pred             CcEEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEcccccCCccc---chHHH----HHHhccCCeEEcCCHHHHHHHHc
Q 026308           32 RALYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPVAAGASGF---RLNAC----LELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        32 d~vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~~~~~~~~---~~~~~----~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      ++-++..|++.+.  +.++.+.+.+++. +.++|+||++.+.++.   ..+..    ..++ .++++||||..|++.|+|
T Consensus        68 ~~~~i~~G~l~~~--~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll-~~~dvitpN~~Ea~~L~g  144 (242)
T cd01169          68 PVDAIKIGMLGSA--EIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLL-PLATLITPNLPEAELLTG  144 (242)
T ss_pred             CCCEEEECCCCCH--HHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhh-ccCeEEeCCHHHHHHHhC
Confidence            3444456886532  4556777777776 8899999998654432   11111    2233 478999999999999999


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHHHHHHH
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSVTALIA  176 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ia  176 (240)
                      .+.         .+.++..++++++.+++...||+||..       ++++++++.++++.++....+++|+||+|+|+++
T Consensus       145 ~~~---------~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~  215 (242)
T cd01169         145 LEI---------ATEEDMMKAAKALLALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIA  215 (242)
T ss_pred             CCC---------CCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHH
Confidence            765         344566678888888777789999542       2556666666666555445678999999999999


Q ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHh
Q 026308          177 AFVAVDPLHAFEATASALSVYGIAGEM  203 (240)
Q Consensus       177 a~la~~~~~~~~A~~~A~~~~~~a~~~  203 (240)
                      +++++| .++.+|+++|..+...+.+.
T Consensus       216 a~l~~g-~~~~~A~~~A~~~~~~~i~~  241 (242)
T cd01169         216 ANLAKG-LSLEEAVREAKEYVTQAIRN  241 (242)
T ss_pred             HHHHCC-CCHHHHHHHHHHHHHHHHHc
Confidence            999996 89999999999999887753

The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.

>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed

Probab=99.87  E-value=1.6e-20  Score=158.47  Aligned_cols=162  Identities=25%  Similarity=0.262  Sum_probs=118.8

Q ss_pred             cCcEEEecCCCCCChHHHHHHHHHHHHhcCC-CEEEcccccCCcccc---hHH---HH-HHhccCCeEEcCCHHHHHHHH
Q 026308           31 VRALYVNVGTLSANWLPSMKAAAQLASQLGK-PWVLDPVAAGASGFR---LNA---CL-ELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~-~vvlDp~~~~~~~~~---~~~---~~-~~~~~~~~vitPN~~E~~~L~  102 (240)
                      .+++.  .|++.+  .+.++.+++.+++.+. ++|+||++.+.++..   .+.   .+ +++ +.+++||||..|++.|+
T Consensus        74 ~~ai~--iG~l~~--~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll-~~~dvitpN~~Ea~~L~  148 (266)
T PRK06427         74 IDAVK--IGMLAS--AEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLL-PLATLITPNLPEAEALT  148 (266)
T ss_pred             CCEEE--ECCcCC--HHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhh-CcCeEEcCCHHHHHHHh
Confidence            45555  567543  2556777777887775 899999987654321   111   12 244 47899999999999999


Q ss_pred             cCCCCCCcCCCCCCChH-HHHHHHHHHHHhcCCEEEEecCc--------cEEEcCcEEEEEecCCccCCCccchhhHHHH
Q 026308          103 RASVGPTKGVDSSHESM-DAMEAARCLAEASGAIVAVSGAV--------DIVTDGRRVVGAHNGVPMMQKITATGCSVTA  173 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~-~~~~~a~~l~~~~~~~VvitG~~--------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag  173 (240)
                      |.+.         .+.+ ++.+++++|.+.+...||+||..        ++++++++.+.++.+.....+++|+||+|+|
T Consensus       149 g~~~---------~~~~~~~~~~a~~l~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a  219 (266)
T PRK06427        149 GLPI---------ADTEDEMKAAARALHALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSA  219 (266)
T ss_pred             CCCC---------CCcHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHH
Confidence            9764         2333 37788888887777789999543        2566666666666544445577999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +++++++++ .++.+|+++|..+...+.+.+.+.
T Consensus       220 ~l~~~l~~g-~~l~~A~~~A~~~~~~~i~~~~~~  252 (266)
T PRK06427        220 AIAAELAKG-ASLLDAVQTAKDYVTRAIRHALEI  252 (266)
T ss_pred             HHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999996 899999999999999999887664

>PTZ00493 phosphomethylpyrimidine kinase; Provisional

Probab=99.86  E-value=3.4e-20  Score=158.56  Aligned_cols=170  Identities=16%  Similarity=0.126  Sum_probs=115.8

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhc------CCCEEEcccccCCcccch----HHH----HHHhccCCeEEcCC
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQL------GKPWVLDPVAAGASGFRL----NAC----LELVQLKPTVIRGN   94 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~------~~~vvlDp~~~~~~~~~~----~~~----~~~~~~~~~vitPN   94 (240)
                      .....=+++.||+.+.  +.++.+.+.++++      ..|+|+||++..+++..+    +..    +.++ +..++||||
T Consensus        70 ~D~~i~aIKiGmL~s~--e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Ll-p~a~viTPN  146 (321)
T PTZ00493         70 ADVTIDVVKLGVLYSK--KIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLIC-PISCIITPN  146 (321)
T ss_pred             hCCCCCEEEECCcCCH--HHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhh-ccCEEECCC
Confidence            3445567899997442  3344454444443      224999999988766432    122    2244 589999999


Q ss_pred             HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEecCc--------------cEEEcC-----------
Q 026308           95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVSGAV--------------DIVTDG-----------  148 (240)
Q Consensus        95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~VvitG~~--------------~~i~~~-----------  148 (240)
                      ..|++.|+|..- .  ..+  .+.+++.+++++|.++ +...|++||++              |++++.           
T Consensus       147 ~~Ea~~L~g~~~-~--~~~--~~~~~~~~aA~~l~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~  221 (321)
T PTZ00493        147 FYECKVILEALD-C--QMD--LSKANMTELCKLVTEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQ  221 (321)
T ss_pred             HHHHHHHhCCCc-c--cCC--CCHHHHHHHHHHHHHhcCCCEEEECcCCCcccccccccccceeEEecCCcccccccccc
Confidence            999999998210 0  001  1346788899999876 55679999743              244321           


Q ss_pred             ----c------EEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          149 ----R------RVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       149 ----~------~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                          +      ..+.+..++....+++|+||+|+++||++|++| +++.+|++.|..|...+++.+.+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G-~~l~~Av~~A~~fv~~aI~~s~~~  289 (321)
T PTZ00493        222 QIDAGGVTYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKK-HNILQSCIESKKYIYNCIRYAYPF  289 (321)
T ss_pred             ccccccccccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHhhc
Confidence                1      123444333333567999999999999999996 899999999999999999987654

>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP

Probab=99.85  E-value=2.4e-20  Score=156.31  Aligned_cols=163  Identities=20%  Similarity=0.136  Sum_probs=120.2

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhc--CCCEEEcccccCCcccc---h---HHHHHHhccCCeEEcCCHHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQL--GKPWVLDPVAAGASGFR---L---NACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~--~~~vvlDp~~~~~~~~~---~---~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      ..++++  .|++ +....+.+.++++.+++.  ++++|+||++.+.+...   .   ...++++.++++++|||..|++.
T Consensus        72 ~~~~v~--~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~  149 (254)
T cd01173          72 EYDAVL--TGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELEL  149 (254)
T ss_pred             cCCEEE--EecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHH
Confidence            455554  6774 556677888888888876  89999999875433221   1   12344454489999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------c-EEEcCcEEEEEecCCcc-CCCccchhhHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------D-IVTDGRRVVGAHNGVPM-MQKITATGCSV  171 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~l  171 (240)
                      |+|.+.         .+.++..+.+++|.+++...|++||..       + +++++++.+..+.+... ..+++|+||+|
T Consensus       150 l~g~~~---------~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f  220 (254)
T cd01173         150 LTGKKI---------NDLEDAKAAARALHAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLF  220 (254)
T ss_pred             HcCCCc---------CCHHHHHHHHHHHHHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHH
Confidence            999865         456778888999988887789999432       2 34554444444433333 36779999999


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Q 026308          172 TALIAAFVAVDPLHAFEATASALSVYGIAGEMG  204 (240)
Q Consensus       172 ag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a  204 (240)
                      +|++++.++++ .++.+|+++|..+...+.+.+
T Consensus       221 ~a~~~~~l~~g-~~~~~a~~~A~~~~~~~i~~~  252 (254)
T cd01173         221 AALLLARLLKG-KSLAEALEKALNFVHEVLEAT  252 (254)
T ss_pred             HHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHh
Confidence            99999999996 899999999999999888754

Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.

>PRK07105 pyridoxamine kinase; Validated

Probab=99.84  E-value=2.4e-19  Score=152.71  Aligned_cols=188  Identities=18%  Similarity=0.111  Sum_probs=131.8

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCccc----chH---HHHHHhccCCeEEcCCHHHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGF----RLN---ACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~----~~~---~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      ..|++.  .|++ +.+..+.+.+.++.+++.++++|+||++.+.+.+    ..+   ..++++ +.+++||||..|++.|
T Consensus        75 ~~~aik--~G~l~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll-~~advitpN~~Ea~~L  151 (284)
T PRK07105         75 KFDAIY--SGYLGSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLI-QKADVITPNLTEACLL  151 (284)
T ss_pred             ccCEEE--ECcCCCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHH-hhCCEecCCHHHHHHH
Confidence            456555  6785 5555555566665556668899999998654321    111   233455 4899999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEec-----C-cc-EEEcC--cEEEEEecCCccCCCccchhhHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSG-----A-VD-IVTDG--RRVVGAHNGVPMMQKITATGCSVT  172 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG-----~-~~-~i~~~--~~~~~~~~~~~~~~~~~GaGD~la  172 (240)
                      +|.++.     +...+.+++.+++++|.+.+...||+||     . .+ +++++  +..+..+.+.. ..+++|+||+|+
T Consensus       152 ~g~~~~-----~~~~~~~~~~~~a~~l~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~-~~~~~GaGD~f~  225 (284)
T PRK07105        152 LDKPYL-----EKSYSEEEIKQLLRKLADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYI-PAHYPGTGDIFT  225 (284)
T ss_pred             cCCCcC-----cCCCCHHHHHHHHHHHHhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeeccc-CCCcCChhHHHH
Confidence            997640     0002456778888888877767899996     2 12 33443  34555543333 356799999999


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhC--CCccccHHHHHHHHhcCCH
Q 026308          173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCLHGLDQ  227 (240)
Q Consensus       173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~--~~~g~~~~~~~~~l~~~~~  227 (240)
                      |++++.+++| .++.+|+++|..+...+++.+....  ..+|...+++++.|.....
T Consensus       226 aa~~~~l~~g-~~l~~av~~A~~~~~~~i~~~~~~~~~~~~~i~~~~~l~~~~~~~~  281 (284)
T PRK07105        226 SVITGSLLQG-DSLPIALDRAVQFIEKGIRATLGLKYDLREGILLEKVLGYLIAPFQ  281 (284)
T ss_pred             HHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHhcCCchhhCccHHHHHHHHHHHHH
Confidence            9999999996 8999999999999999998776642  2568888888888876544

>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed

Probab=99.83  E-value=3.8e-19  Score=151.25  Aligned_cols=164  Identities=15%  Similarity=0.077  Sum_probs=119.0

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHh--cCCCEEEcccccCCcc--c-chHH---HH-HHhccCCeEEcCCHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQ--LGKPWVLDPVAAGASG--F-RLNA---CL-ELVQLKPTVIRGNASEII   99 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~~--~-~~~~---~~-~~~~~~~~vitPN~~E~~   99 (240)
                      ++|++.  .|++ +.+..+.+.+.++..+.  .+.++|+||++.+.++  + ..+.   .+ +++ ..+++||||..|++
T Consensus        88 ~~d~i~--~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll-~~advitPN~~Ea~  164 (281)
T PRK08176         88 QLRAVT--TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLL-PLAQGLTPNIFELE  164 (281)
T ss_pred             cCCEEE--ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhH-hhcCEeCCCHHHHH
Confidence            567776  5776 54555555555555443  3688999999877654  1 1111   22 344 48999999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC-cc--------EEEcCcEEEEEecCCccCCCccchhhH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA-VD--------IVTDGRRVVGAHNGVPMMQKITATGCS  170 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~-~~--------~i~~~~~~~~~~~~~~~~~~~~GaGD~  170 (240)
                      .|+|.++         .+.+++.+.+++|.+.+...||+||. .+        +++++++.+..+.+ ....+++|+||+
T Consensus       165 ~L~g~~~---------~~~~~~~~~~~~l~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~GaGD~  234 (281)
T PRK08176        165 ILTGKPC---------RTLDSAIAAAKSLLSDTLKWVVITSAAGNEENQEMQVVVVTADSVNVISHP-RVDTDLKGTGDL  234 (281)
T ss_pred             HHhCCCC---------CCHHHHHHHHHHHHhcCCCEEEEeeccCCCCCCcEEEEEEeCCceEEEecC-ccCCCCCChhHH
Confidence            9999765         45667888899998877777999953 32        34555554444433 333567999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      |+|++++.+++| .++.+|+++|..+...+.+.+.+.
T Consensus       235 faa~~~a~l~~g-~~l~~Av~~A~~~v~~~i~~t~~~  270 (281)
T PRK08176        235 FCAELVSGLLKG-KALTDAAHRAGLRVLEVMRYTQQA  270 (281)
T ss_pred             HHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999996 899999999999999999877654

>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase

Probab=99.83  E-value=5.1e-19  Score=161.69  Aligned_cols=168  Identities=24%  Similarity=0.225  Sum_probs=124.0

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCC-CEEEcccccCCcccch---HH---H-HHHhccCCeEEcCCHHHH
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK-PWVLDPVAAGASGFRL---NA---C-LELVQLKPTVIRGNASEI   98 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~-~vvlDp~~~~~~~~~~---~~---~-~~~~~~~~~vitPN~~E~   98 (240)
                      .+...++-.+++|++.+  .+.+..+++.+++.+. ++|+||++.+..+...   +.   . .+++ ..+++||||..|+
T Consensus        73 ~~~d~~~~aik~G~l~~--~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll-~~adiitPN~~Ea  149 (502)
T PLN02898         73 VLSDMPVDVVKTGMLPS--AEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELL-PLATIVTPNVKEA  149 (502)
T ss_pred             HHhCCCCCEEEECCcCC--HHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhh-ccCeEEcCCHHHH
Confidence            34455566677888744  3566788888888777 4999999866554211   11   1 1233 4789999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------cEEEcCcEEEEEecCCccCCCccchhhH
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------DIVTDGRRVVGAHNGVPMMQKITATGCS  170 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~~i~~~~~~~~~~~~~~~~~~~~GaGD~  170 (240)
                      +.|+|...        ..+.+++.+.+++|.+.+...||+||..        ++++++++.+.++.+.....+++|+||+
T Consensus       150 ~~L~g~~~--------~~~~~~~~~~a~~l~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~  221 (502)
T PLN02898        150 SALLGGDP--------LETVADMRSAAKELHKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCT  221 (502)
T ss_pred             HHHhCCCC--------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhh
Confidence            99998542        0355678888889987776789999642        3566666666666544444567999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      |+|++++++++| .++.+|+++|..+...+.+.+..
T Consensus       222 fsaaiaa~l~~G-~~l~eAv~~A~~~v~~ai~~~~~  256 (502)
T PLN02898        222 LASCIAAELAKG-SDMLSAVKVAKRYVETALEYSKD  256 (502)
T ss_pred             HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999996 89999999999999999987744

>PRK08573 phosphomethylpyrimidine kinase; Provisional

Probab=99.83  E-value=7.7e-19  Score=158.23  Aligned_cols=167  Identities=28%  Similarity=0.271  Sum_probs=122.8

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCccc---chHH----HHHHhccCCeEEcCCHHHHH
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGF---RLNA----CLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~---~~~~----~~~~~~~~~~vitPN~~E~~   99 (240)
                      +++..+.-.++.|++++  .+.+..+++.+++.+.++|+||++...++.   ..+.    ..+++ +.+++||||..|++
T Consensus        66 ~~~d~~~~~ik~G~l~~--~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~ll-p~adli~pN~~Ea~  142 (448)
T PRK08573         66 VWEDMGIDAAKTGMLSN--REIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLL-PLATVVTPNRPEAE  142 (448)
T ss_pred             HHhcCCCCEEEECCcCC--HHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhh-ccCEEEcCCHHHHH
Confidence            33444445667888754  366788899999999999999987643221   1111    12333 46899999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEAS-GAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSV  171 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~-~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~l  171 (240)
                      .|+|.+.         .+.++..+++++|.+++ ...|++||..       +++++++..+.++.++....+++|+||+|
T Consensus       143 ~L~g~~i---------~~~~d~~~aa~~L~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaF  213 (448)
T PRK08573        143 KLTGMKI---------RSVEDARKAAKYIVEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSF  213 (448)
T ss_pred             HHhCCCC---------CCHHHHHHHHHHHHHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHH
Confidence            9999765         45667888899998654 4568999542       24555556666665554556779999999


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          172 TALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       172 ag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      +|++++++++| .++.+|+++|..+...+.+....
T Consensus       214 sAa~aa~l~~G-~~l~eAl~~A~~~~~~al~~~~~  247 (448)
T PRK08573        214 SAAIAAGLAKG-LDPEEAIKTAKKFITMAIKYGVK  247 (448)
T ss_pred             HHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999996 89999999999999998886644

>PRK05756 pyridoxamine kinase; Validated

Probab=99.82  E-value=1.1e-18  Score=148.75  Aligned_cols=165  Identities=19%  Similarity=0.094  Sum_probs=122.7

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCcc-c--chHH---HH-HHhccCCeEEcCCHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASG-F--RLNA---CL-ELVQLKPTVIRGNASEII   99 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~-~--~~~~---~~-~~~~~~~~vitPN~~E~~   99 (240)
                      .+|+++  .|++ +....+.+.++++.+++.+  ..+|+||++.+..+ .  ..+.   .+ .++ .++++||||..|++
T Consensus        74 ~~~~v~--~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll-~~adiitpN~~Ea~  150 (286)
T PRK05756         74 ECDAVL--SGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRAL-PAADIITPNLFELE  150 (286)
T ss_pred             cCCEEE--ECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhc-ccccEecCCHHHHH
Confidence            567554  5774 5556777888888777665  56899999987442 2  1111   12 244 48999999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEec-Cc--------cE-EEcCcEEEEEecCCccC-CCccchh
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSG-AV--------DI-VTDGRRVVGAHNGVPMM-QKITATG  168 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG-~~--------~~-i~~~~~~~~~~~~~~~~-~~~~GaG  168 (240)
                      .|+|.+.         .+.+++.+.+++|.+.+...|++|+ ..        +. ++++++.+..+.+.... .+++|||
T Consensus       151 ~L~g~~~---------~~~~~~~~~~~~l~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaG  221 (286)
T PRK05756        151 WLSGRPV---------ETLEDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVG  221 (286)
T ss_pred             HHhCCCc---------CCHHHHHHHHHHHHHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChH
Confidence            9999765         4567788889999877767799994 32        23 45666666666444444 3779999


Q ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          169 CSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       169 D~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      |+|+|++++.++.+ .++.+|+++|..+...+.+.+.+.
T Consensus       222 D~f~a~~~a~l~~g-~~~~~al~~A~~~~~~~i~~~~~~  259 (286)
T PRK05756        222 DLTSALFLARLLQG-GSLEEALEHTTAAVYEVMARTKER  259 (286)
T ss_pred             HHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999996 899999999999999999987663

>PTZ00347 phosphomethylpyrimidine kinase; Provisional

Probab=99.82  E-value=1.3e-18  Score=159.11  Aligned_cols=165  Identities=20%  Similarity=0.226  Sum_probs=121.0

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCccc---chHH----HH----HHhccCCeEEcCCH
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGF---RLNA----CL----ELVQLKPTVIRGNA   95 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~---~~~~----~~----~~~~~~~~vitPN~   95 (240)
                      +++..++.+|++|++.+  .+.++.+++.++  +.|+|+||++.+.++.   +...    ..    +++ +.+++||||.
T Consensus       294 l~~d~~~~~Ik~G~l~s--~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll-~~advitPN~  368 (504)
T PTZ00347        294 VMSDFNISVVKLGLVPT--ARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIF-PMATIITPNI  368 (504)
T ss_pred             HHhCCCCCEEEECCcCC--HHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhcc-CcceEEeCCH
Confidence            44566778888898644  255566666664  6789999999754431   1111    11    233 4679999999


Q ss_pred             HHHHHHHcCC-CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc---------cEEEcC--cEEEEEecCCccCCC
Q 026308           96 SEIIALSRAS-VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV---------DIVTDG--RRVVGAHNGVPMMQK  163 (240)
Q Consensus        96 ~E~~~L~g~~-~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~---------~~i~~~--~~~~~~~~~~~~~~~  163 (240)
                      .|++.|+|.+ .         .+.++..+++++|.+.+...||+||+.         ++++++  ++.+.++.++....+
T Consensus       369 ~Ea~~L~g~~~~---------~~~~~~~~aa~~l~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~  439 (504)
T PTZ00347        369 PEAERILGRKEI---------TGVYEARAAAQALAQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATIN  439 (504)
T ss_pred             HHHHHHhCCCCC---------CCHHHHHHHHHHHHhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCC
Confidence            9999999964 3         355677788888888666679999543         456553  345666655545567


Q ss_pred             ccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          164 ITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       164 ~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      ++||||+|+|++++++++| .++.+|++.|..+...+++.+..
T Consensus       440 ~~GaGD~fsaaiaa~la~G-~~l~eAv~~A~~~v~~~i~~~~~  481 (504)
T PTZ00347        440 THGTGCTLASAISSFLARG-YTVPDAVERAIGYVHEAIVRSCG  481 (504)
T ss_pred             CCChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHhcCc
Confidence            7999999999999999996 89999999999999999988764

>PRK12413 phosphomethylpyrimidine kinase; Provisional

Probab=99.81  E-value=3.6e-18  Score=143.10  Aligned_cols=164  Identities=22%  Similarity=0.235  Sum_probs=119.2

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHH-hcCCCEEEcccccCCccc--chHH----HHHHhccCCeEEcCCHHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLAS-QLGKPWVLDPVAAGASGF--RLNA----CLELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~-~~~~~vvlDp~~~~~~~~--~~~~----~~~~~~~~~~vitPN~~E~~~L~  102 (240)
                      ..+..++..|++++.  +.++.+++.++ +.+.++|+||++......  ....    .++++ +.+++||||..|++.|+
T Consensus        68 ~~~~~~i~~G~l~~~--~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll-~~~dli~pN~~E~~~L~  144 (253)
T PRK12413         68 DVPFSAIKIGLLPNV--EIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFF-PYVTVITPNLVEAELLS  144 (253)
T ss_pred             CCCCCEEEECCcCCH--HHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHh-ccCcEECCCHHHHHHHh
Confidence            456677777886432  44566666666 468899999998754321  1111    22333 46799999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------cEEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------DIVTDGRRVVGAHNGVPMMQKITATGCSVTAL  174 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~  174 (240)
                      |.+.         .+.+++.+++++|.+.+...|++|+..        +++++++..+... .+....+++|+||+|+|+
T Consensus       145 g~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GaGDaf~a~  214 (253)
T PRK12413        145 GKEI---------KTLEDMKEAAKKLYDLGAKAVVIKGGNRLSQKKAIDLFYDGKEFVILE-SPVLEKNNIGAGCTFASS  214 (253)
T ss_pred             CcCC---------CCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcceEEEEcCCEEEEEe-ecccCCCCCChHHHHHHH
Confidence            9765         456778888899988776679999442        2456666655443 333445679999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          175 IAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       175 iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +++.++++ .++.+|+++|..+...+.+.+.+.
T Consensus       215 ~~~~l~~g-~~l~ea~~~A~~~~~~~l~~~~~~  246 (253)
T PRK12413        215 IASQLVKG-KSPLEAVKNSKDFVYQAIQQSDQY  246 (253)
T ss_pred             HHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999996 899999999999999999877653

>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional

Probab=99.79  E-value=5.7e-18  Score=155.55  Aligned_cols=160  Identities=25%  Similarity=0.219  Sum_probs=113.3

Q ss_pred             cEEEecCCC-CCChHHHHHHHHHHHHhcC-CCEEEcccccCCccc---chH---HHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           33 ALYVNVGTL-SANWLPSMKAAAQLASQLG-KPWVLDPVAAGASGF---RLN---ACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        33 ~vvi~~G~~-~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~~---~~~---~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .-.++.|++ +.+.++   .+.+.+++.. .++|+||++....+.   ..+   ..++++ +.+++||||..|++.|+|.
T Consensus        99 ~~aikiG~l~s~~~i~---~v~~~l~~~~~~~vVlDPv~~~~~G~~l~~~~~~~~~~~Ll-~~advItPN~~Ea~~Ltg~  174 (530)
T PRK14713         99 VDAVKIGMLGDAEVID---AVRTWLAEHRPPVVVLDPVMVATSGDRLLEEDAEAALRELV-PRADLITPNLPELAVLLGE  174 (530)
T ss_pred             CCEEEECCcCCHHHHH---HHHHHHHhCCCCCEEECCcccCCCCCCCCCHHHHHHHHHHh-hhhheecCChHHHHHHhCC
Confidence            334557887 444444   4444444433 469999998643332   111   123455 4899999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCc-EEEEEecCCccCCCccchhhHHHHHHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGR-RVVGAHNGVPMMQKITATGCSVTALIA  176 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~ia  176 (240)
                      +.        ..+.+++.+++++|.++++..||+||+.       ++++.++ ..+.++..+....+++|+||+|+|+++
T Consensus       175 ~~--------~~~~~d~~~aa~~L~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaala  246 (530)
T PRK14713        175 PP--------ATTWEEALAQARRLAAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALA  246 (530)
T ss_pred             CC--------CCCHHHHHHHHHHHHHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHH
Confidence            54        0245678888899988777789999652       3555433 356566444444567999999999999


Q ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 026308          177 AFVAVDPLHAFEATASALSVYGIAGEMGM  205 (240)
Q Consensus       177 a~la~~~~~~~~A~~~A~~~~~~a~~~a~  205 (240)
                      +++++| .++.+|++.|..+...+++.+.
T Consensus       247 a~La~G-~~l~eAv~~A~~~v~~~i~~a~  274 (530)
T PRK14713        247 TRLGRG-GDWAAALRWATAWLHGAIAAGA  274 (530)
T ss_pred             HHHHCC-CCHHHHHHHHHHHHHHHHHhCC
Confidence            999996 8999999999999999998764

>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional

Probab=99.79  E-value=1e-17  Score=159.39  Aligned_cols=163  Identities=26%  Similarity=0.269  Sum_probs=120.3

Q ss_pred             cCcEEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEcccccCCcccch------HHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308           31 VRALYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPVAAGASGFRL------NACLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~~~~~~~~~~------~~~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      ...=.++.|++.+  .+.+..+++.+++. +.++|+||++...++...      +..++++ +.+++||||..|++.|+|
T Consensus       309 ~~~~aiKiGmL~s--~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Ll-p~adlItPN~~Ea~~L~g  385 (755)
T PRK09517        309 VTVDAVKLGMLGS--ADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLA-VHVDVVTPNIPELAVLCG  385 (755)
T ss_pred             CCCCEEEECCCCC--HHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHh-CcccCccCCHHHHHHHhC
Confidence            3344566788744  25567777777775 477999999876544321      1123444 479999999999999999


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC-------ccEEEc-CcEEEEEecCCccCCCccchhhHHHHHH
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA-------VDIVTD-GRRVVGAHNGVPMMQKITATGCSVTALI  175 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~-------~~~i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~i  175 (240)
                      ...        ..+.+++.+++++|.+.+++.||+||+       .+.++. ++..+.++.+.....+++|+||+|+|+|
T Consensus       386 ~~~--------~~~~~d~~~aa~~L~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaai  457 (755)
T PRK09517        386 EAP--------AITMDEAIAQARGFARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAAL  457 (755)
T ss_pred             CCC--------CCCHHHHHHHHHHHHHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHH
Confidence            531        034567888899998877778999965       245544 3345566655555567899999999999


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 026308          176 AAFVAVDPLHAFEATASALSVYGIAGEMGM  205 (240)
Q Consensus       176 aa~la~~~~~~~~A~~~A~~~~~~a~~~a~  205 (240)
                      ++++++| .++.+|++.|..+...+++.+.
T Consensus       458 aa~La~G-~sl~eAv~~A~~~v~~~i~~a~  486 (755)
T PRK09517        458 ATLIAAG-ESVEKALEWATRWLNEALRHAD  486 (755)
T ss_pred             HHHHHCC-CCHHHHHHHHHHHHHHHHHhcC
Confidence            9999996 8999999999999999998773

>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]

Probab=99.79  E-value=4.6e-18  Score=146.31  Aligned_cols=171  Identities=20%  Similarity=0.268  Sum_probs=127.0

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhcC-CCEEEcccccCCcccch---H----HHHHHhccCCeEEcCCHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQLG-KPWVLDPVAAGASGFRL---N----ACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~~~~---~----~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      ...+=|+++||+.+.  +++..+.+.+.+.+ .++|+||+++..++--.   +    ..++++ +.++++|||..|+-.|
T Consensus        90 Di~C~VvKTGML~~~--~I~~vi~q~l~~~~~~klVvDPVivatsG~~l~~~divsl~~e~l~-P~adiltPNI~Ea~~L  166 (523)
T KOG2598|consen   90 DIKCDVVKTGMLPSP--EIVKVIEQSLQKFNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELL-PFADILTPNIPEAFIL  166 (523)
T ss_pred             cCcccEEeecCcCch--HHHHHHHHHHHhhcCcceeecceEEeccCCcccCCccHHHHHHHhh-hhHHHhCCChHHHHHH
Confidence            445667899997543  22333334444455 46999999987765311   1    234455 5789999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC-------------------ccEEEcCcEEEEEecCCccCC
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA-------------------VDIVTDGRRVVGAHNGVPMMQ  162 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~-------------------~~~i~~~~~~~~~~~~~~~~~  162 (240)
                      ++...   +.+....+..|+.+.+.++.+.++..|+++|+                   .|+++++++.+.++.+.....
T Consensus       167 l~~~~---~~~~~i~~v~di~~~~~~ihk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~  243 (523)
T KOG2598|consen  167 LKKEK---REISKIQSVFDIAKDAAKIHKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATK  243 (523)
T ss_pred             Hhhcc---cCCcccccHHHHHHHHHHHHhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccc
Confidence            98421   11122356778888899999888888999975                   135678888888876555566


Q ss_pred             CccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          163 KITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       163 ~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +++|+||+|+++||+.||+| .++.+|++.|..+...|+++....
T Consensus       244 ~tHGtgCtLaSAIASnLA~g-~sl~qAv~~ai~yvq~Ai~~s~~i  287 (523)
T KOG2598|consen  244 HTHGTGCTLASAIASNLARG-YSLLQAVQGAIEYVQNAIAISCDI  287 (523)
T ss_pred             cccCccchHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHHHhcCCc
Confidence            78999999999999999996 999999999999999999987665

>TIGR00687 pyridox_kin pyridoxal kinase

Probab=99.78  E-value=2.6e-17  Score=140.38  Aligned_cols=166  Identities=19%  Similarity=0.156  Sum_probs=119.8

Q ss_pred             cccCcEEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCccc---chHH---HH-HHhccCCeEEcCCHHHH
Q 026308           29 PHVRALYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGF---RLNA---CL-ELVQLKPTVIRGNASEI   98 (240)
Q Consensus        29 ~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~---~~~~---~~-~~~~~~~~vitPN~~E~   98 (240)
                      .++|+++  .|++ +....+.+.++++.+++.+  +++|+||++.+.++.   ....   .+ .++ ..+++||||..|+
T Consensus        73 ~~~d~v~--~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll-~~adii~pN~~Ea  149 (286)
T TIGR00687        73 NQCDAVL--SGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAI-PVADIITPNQFEL  149 (286)
T ss_pred             ccCCEEE--ECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhcc-ccccEecCCHHHH
Confidence            3677764  5775 5556778888888887765  679999988765322   1111   11 233 4689999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe--cCcc---------EEEcCcEEEEEecCCcc-CCCccc
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS--GAVD---------IVTDGRRVVGAHNGVPM-MQKITA  166 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit--G~~~---------~i~~~~~~~~~~~~~~~-~~~~~G  166 (240)
                      +.|+|.+.         .+.+++.+++++|.+.+...|++|  |..+         +++++++.+..+.+... ..+++|
T Consensus       150 ~~L~g~~~---------~~~~~~~~~~~~l~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G  220 (286)
T TIGR00687       150 ELLTGRKI---------NTVEEALAAADALIAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVG  220 (286)
T ss_pred             HHHhCCCc---------CCHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCC
Confidence            99999765         456678888888888776678888  3322         33455555555533433 356799


Q ss_pred             hhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          167 TGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       167 aGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +||+|+|++++.+++| .++.+|+++|..+...+.+.....
T Consensus       221 aGD~f~A~~l~~l~~g-~~~~~al~~A~~~v~~~l~~t~~~  260 (286)
T TIGR00687       221 TGDLIAALLLATLLHG-NSLKEALEKTVSAVYHVLVTTIAL  260 (286)
T ss_pred             hHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999996 899999999999988888766553

ThiD and related proteins form an outgroup.

>PRK10294 6-phosphofructokinase 2; Provisional

Probab=99.77  E-value=8.8e-17  Score=138.40  Aligned_cols=172  Identities=15%  Similarity=0.082  Sum_probs=123.4

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCCHHHHHHHHcCCC
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN~~E~~~L~g~~~  106 (240)
                      +++++.+++...++.....+.+.++++.+++.++++++||.+.        .....+. ..+++++||..|+..|+|.+.
T Consensus       128 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~~~~~~~~~i~~n~~E~~~l~g~~~  199 (309)
T PRK10294        128 IESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGD--------ALSAALAIGNIELVKPNQKELSALVNRDL  199 (309)
T ss_pred             cCCCCEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCH--------HHHHHHhcCCCeEECCCHHHHHHHhCCCC
Confidence            4678888886333443345677889999999999999999751        1122222 368999999999999999764


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                               .+.+++.++++++.+.++ ..||+| |..+. ++++++.++++.++....+++||||+|.|.+...+.+| 
T Consensus       200 ---------~~~~~~~~a~~~l~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g-  269 (309)
T PRK10294        200 ---------TQPDDVRKAAQELVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-  269 (309)
T ss_pred             ---------CCHHHHHHHHHHHHHcCCCCEEEEecCCCceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcC-
Confidence                     345667788888887764 568888 77654 45656666666555566788999999999888888886 


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCL  222 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l  222 (240)
                      .++.+|+++|+.++..+..    . .|......+.++.+
T Consensus       270 ~~~~~al~~a~a~aa~~v~----~-~G~~~~~~~~~~~~  303 (309)
T PRK10294        270 ASLEEMVRFGVAAGSAATL----N-QGTRLCSHDDTQKI  303 (309)
T ss_pred             CCHHHHHHHHHHHHHHHhc----C-CCCCCCCHHHHHHH
Confidence            8999999999887665443    2 45555544444444

>PLN02978 pyridoxal kinase

Probab=99.76  E-value=5.9e-17  Score=139.37  Aligned_cols=164  Identities=18%  Similarity=0.120  Sum_probs=118.0

Q ss_pred             cCcEEEecCCC-CCChHHHHHHHHHHHHh--cCCCEEEcccccCCcccc--hHH---HH-HHhccCCeEEcCCHHHHHHH
Q 026308           31 VRALYVNVGTL-SANWLPSMKAAAQLASQ--LGKPWVLDPVAAGASGFR--LNA---CL-ELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        31 ~d~vvi~~G~~-~~~~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~~~~--~~~---~~-~~~~~~~~vitPN~~E~~~L  101 (240)
                      +|+++  .|++ +....+.+..+++.+++  .++++|+||++.+.+...  .+.   .+ .++ ..+++||||..|++.|
T Consensus        87 ~~ai~--~G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll-~~adiitPN~~Ea~~L  163 (308)
T PLN02978         87 YTHLL--TGYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVV-PLATMLTPNQFEAEQL  163 (308)
T ss_pred             cCEEE--ecccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHH-hhCCeeccCHHHHHHH
Confidence            56666  5776 66677777788877776  447899999987644321  111   22 344 4799999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC---ccE-EEc--------CcEEEEEecCCccCCCccchhh
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA---VDI-VTD--------GRRVVGAHNGVPMMQKITATGC  169 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~---~~~-i~~--------~~~~~~~~~~~~~~~~~~GaGD  169 (240)
                      +|.++         .+.+++.++++++.+.+...||+||.   ..+ +..        .++.+.+..++.. ..++|+||
T Consensus       164 ~g~~~---------~~~~~~~~a~~~l~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~GtGD  233 (308)
T PLN02978        164 TGIRI---------VTEEDAREACAILHAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKIP-AYFTGTGD  233 (308)
T ss_pred             hCCCC---------CCHHHHHHHHHHHHHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCCC-CCCCCchH
Confidence            99765         35567788888888877777888863   222 221        1345555544433 33599999


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          170 SVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       170 ~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +|+|+++++++.++.++.+|++.|..+...+++.+.+.
T Consensus       234 ~fsA~laa~l~~g~~~l~~A~~~A~~~v~~~i~~t~~~  271 (308)
T PLN02978        234 LMAALLLGWSHKYPDNLDKAAELAVSSLQAVLRRTLAD  271 (308)
T ss_pred             HHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999742589999999999999999987663

>TIGR03828 pfkB 1-phosphofructokinase

Probab=99.76  E-value=1.9e-16  Score=135.70  Aligned_cols=157  Identities=21%  Similarity=0.123  Sum_probs=117.1

Q ss_pred             hhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           27 FTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        27 ~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      .+++++++++. |. +.....+.+..+++.+++.+.++++||...        ...+.+...+++++||..|++.|+|.+
T Consensus       124 ~l~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~--------~~~~~~~~~~~i~~~n~~E~~~l~g~~  194 (304)
T TIGR03828       124 QLAEGDWLVLS-GSLPPGVPPDFYAELIALAREKGAKVILDTSGE--------ALRDGLKAKPFLIKPNDEELEELFGRE  194 (304)
T ss_pred             hccCCCEEEEE-CCCCCCCCHHHHHHHHHHHHHcCCEEEEECChH--------HHHHHHhcCCcEECcCHHHHHHHhCCC
Confidence            46789999985 44 322234667888889999999999999751        112333346789999999999999976


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                      .         .+.+++.+.++.+.+.+...||+| |..+ +++++++.++.+.....+.+++|+||+|+|.+...+.++ 
T Consensus       195 ~---------~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g-  264 (304)
T TIGR03828       195 L---------KTLEEIIEAARELLDLGAENVLISLGADGALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESG-  264 (304)
T ss_pred             C---------CCHHHHHHHHHHHHHcCCCEEEEccCCCCcEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcC-
Confidence            4         345677778888887766678888 7655 455666666666555556788999999999999888886 


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++.+|+++|+.+++.+..
T Consensus       265 ~~~~~a~~~a~~~Aa~~~~  283 (304)
T TIGR03828       265 LSLEEALRLAVAAGSAAAF  283 (304)
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            8999999999987665543

This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).

>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family

Probab=99.76  E-value=2.3e-16  Score=135.25  Aligned_cols=158  Identities=22%  Similarity=0.160  Sum_probs=117.2

Q ss_pred             hhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           26 DFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      +.++++|++++. |.. +....+.+..+++.+++.++++++||..     .   ...+.+..++++++||..|+..|+|.
T Consensus       123 ~~~~~~~~v~i~-~~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~-----~---~~~~~~~~~~dil~~n~~E~~~l~g~  193 (303)
T TIGR03168       123 ELLASGDIVVIS-GSLPPGVPPDFYAQLIAIARKRGAKVILDTSG-----E---ALREALAAKPFLIKPNHEELEELFGR  193 (303)
T ss_pred             HhccCCCEEEEe-CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCc-----H---HHHHHHhcCCcEECCCHHHHHHHhCC
Confidence            347789999985 432 2223466788889999999999999975     1   11233324789999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      +.         .+.+++.++++.+.+++...||+| |..+ +++++++.++.+..+....+++|+||+|+|++.+.+.++
T Consensus       194 ~~---------~~~~~~~~~~~~l~~~g~~~vviT~g~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g  264 (303)
T TIGR03168       194 EL---------KTEEEIIEAARELLDRGAENVLVSLGADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARG  264 (303)
T ss_pred             CC---------CCHHHHHHHHHHHHHcCCCEEEEeecCCCcEEEeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcC
Confidence            64         345667777888877766678888 7655 456666677777555555678999999999999888885


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+|+++|+.+++....
T Consensus       265 -~~i~~a~~~A~~~aa~~~~  283 (303)
T TIGR03168       265 -LSLEEALRFAVAAGSAAAF  283 (303)
T ss_pred             -CCHHHHHHHHHHHHHHHhc
Confidence             7999999999887665443

This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.

>PRK13508 tagatose-6-phosphate kinase; Provisional

Probab=99.75  E-value=2.2e-16  Score=135.99  Aligned_cols=174  Identities=22%  Similarity=0.157  Sum_probs=123.5

Q ss_pred             hhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHH
Q 026308           26 DFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALS  102 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~  102 (240)
                      +.++.+|++++. |.. .....+.+..+++.+++.++++++||...     .   ...++.  .++++++||..|++.|+
T Consensus       122 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~-----~---~~~~~~~~~~~dii~~n~~E~~~l~  192 (309)
T PRK13508        122 QLLESVEVVAIS-GSLPAGLPVDYYAQLIELANQAGKPVVLDCSGA-----A---LQAVLESPYKPTVIKPNIEELSQLL  192 (309)
T ss_pred             HhccCCCEEEEe-CCCCCCcCHHHHHHHHHHHHHCCCEEEEECCcH-----H---HHHHHhccCCceEEccCHHHHHHHh
Confidence            456789999885 553 22223567788888999999999999751     1   122221  47899999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      |.+.        ..+.+++.+.++++.+.+...|++| |..+. ++++++.++.+.++..+.+++||||+|.|.+...+.
T Consensus       193 g~~~--------~~~~~~~~~~~~~~~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~  264 (309)
T PRK13508        193 GKEV--------SEDLDELKEVLQQPLFEGIEWIIVSLGADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLL  264 (309)
T ss_pred             CCCC--------CCCHHHHHHHHHHHHHcCCCEEEEecCCCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHH
Confidence            9653        0234566666666666666678888 77664 456666777776666667889999999888888888


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCL  222 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l  222 (240)
                      ++ .++.+|+++|+..++.+..     ..+.+.+.+.-++++
T Consensus       265 ~g-~~~~~al~~a~a~aa~~~~-----~~~~~~~~~~~~~~~  300 (309)
T PRK13508        265 HQ-EDDADLLKKANVLGMLNAQ-----EKQTGHVNMANYDEL  300 (309)
T ss_pred             cC-CCHHHHHHHHHHHHHHHhc-----CcCcCCCCHHHHHHH
Confidence            86 8999999999987665443     245666655554444

>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases

Probab=99.75  E-value=2.1e-16  Score=134.68  Aligned_cols=157  Identities=23%  Similarity=0.169  Sum_probs=117.2

Q ss_pred             hhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           27 FTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        27 ~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      .++++|++++. |. +.....+.+..+++.+++.++++++||...        ...+.+...+++++||..|++.+++..
T Consensus       125 ~~~~~~~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~~~--------~~~~~~~~~~dil~~n~~E~~~l~~~~  195 (289)
T cd01164         125 LLKKGDIVVLS-GSLPPGVPADFYAELVRLAREKGARVILDTSGE--------ALLAALAAKPFLIKPNREELEELFGRP  195 (289)
T ss_pred             hcCCCCEEEEe-CCCCCCcCHHHHHHHHHHHHHcCCeEEEECChH--------HHHHHHhcCCcEECCCHHHHHHHhCCC
Confidence            35689999986 44 332233556788888888999999999751        112333247999999999999999975


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                      .         .+.+++.+.++.|.+++...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+...+.++ 
T Consensus       196 ~---------~~~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g-  265 (289)
T cd01164         196 L---------GDEEDVIAAARKLIERGAENVLVSLGADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQG-  265 (289)
T ss_pred             C---------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcC-
Confidence            4         345677788888888876678888 7755 455666677776555556688999999988888888886 


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++.+|+++|+.+++....
T Consensus       266 ~~~~~a~~~A~~~Aa~~~~  284 (289)
T cd01164         266 LSLEEALRLAVAAGSATAF  284 (289)
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            8999999999987665543

FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.

>TIGR01231 lacC tagatose-6-phosphate kinase

Probab=99.75  E-value=3.9e-16  Score=134.40  Aligned_cols=175  Identities=16%  Similarity=0.101  Sum_probs=122.6

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHc
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSR  103 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g  103 (240)
                      +.++.+|++++..-++.....+.+..+++.+++.++++++||...     .   ...++.  .++++++||..|++.|+|
T Consensus       122 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~-----~---~~~~~~~~~~~dil~~n~~E~~~l~g  193 (309)
T TIGR01231       122 QLLEKVEVVAISGSLPKGLPQDYYAQIIERCQNKGVPVVLDCSGA-----T---LQTVLENPAKPTVIKPNIEELSQLLN  193 (309)
T ss_pred             HHhccCCEEEEECCCCCCcCHHHHHHHHHHHHhCCCeEEEECChH-----H---HHHHHhccCCCeEEcCCHHHHHHHhC
Confidence            446788999986332332234667888899999999999999751     1   122222  368999999999999999


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      .+.        ..+.+++.+.++++.+.+...|++| |..+ +++++++.++.+.+.....+++||||+|.|.+...+.+
T Consensus       194 ~~~--------~~~~~~~~~~~~~~~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~  265 (309)
T TIGR01231       194 QEL--------TEDLESLKQALSQPLFSGIEWIIVSLGAQGAFAKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLN  265 (309)
T ss_pred             CCC--------CCCHHHHHHHHHHHHHcCCCEEEEccCCCceEEEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHc
Confidence            653        0244566667777666666678888 8766 44566667777765556678899999998888888888


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHH
Q 026308          182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCL  222 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l  222 (240)
                      | .++.+++++|+.+.+.+...     .++|....+.++++
T Consensus       266 g-~~~~~a~~~a~a~aa~~~~~-----~~~~~~~~~~~~~~  300 (309)
T TIGR01231       266 H-ESDHDLLKKANTLGMLNAQE-----AQTGHVNLNNYDDL  300 (309)
T ss_pred             C-CCHHHHHHHHHHHHHHHhcC-----cccCCCCHHHHHHH
Confidence            5 89999999999876655431     34555544444333

This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation.

>PRK09513 fruK 1-phosphofructokinase; Provisional

Probab=99.74  E-value=7.9e-16  Score=132.63  Aligned_cols=158  Identities=16%  Similarity=0.066  Sum_probs=117.8

Q ss_pred             hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      +.++++|++++. |. ++....+.+..+++.+++.+.++++||..     .   ...+.+...+++++||..|+..|+|.
T Consensus       127 ~~l~~~d~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~-----~---~~~~~~~~~~~~l~~n~~E~~~l~g~  197 (312)
T PRK09513        127 SWLGQFDMVAVS-GSLPRGVSPEAFTDWMTRLRSQCPCIIFDSSR-----E---ALVAGLKAAPWLVKPNRRELEIWAGR  197 (312)
T ss_pred             hhcCCCCEEEEE-CCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh-----H---HHHHHhccCCeEEcCCHHHHHHHhCC
Confidence            456789998885 65 33334566778888888889999999974     1   12233335789999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      +.         .+.+++.+.++.+.+.+...|++| |..+ +++.+++.++.+.+.....+++|+||+|+|.+...+.++
T Consensus       198 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g  268 (312)
T PRK09513        198 KL---------PELKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMR  268 (312)
T ss_pred             CC---------CCHHHHHHHHHHHHHcCCCEEEEEeCCCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcC
Confidence            54         345677777888877766678888 7765 445555566666555556688999999999888888886


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+|+++|+..++.+..
T Consensus       269 -~~~~~a~~~A~a~Aa~~~~  287 (312)
T PRK09513        269 -ESSEHTLRLATAVSALAVS  287 (312)
T ss_pred             -CCHHHHHHHHHHHHHHHhh
Confidence             8999999999987776554

>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=3.3e-17  Score=140.34  Aligned_cols=167  Identities=19%  Similarity=0.171  Sum_probs=125.3

Q ss_pred             hhhhhcccCcEEE---ecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           24 IPDFTPHVRALYV---NVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        24 ~~~~~~~~d~vvi---~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.+.++..|++++   +.|.+++     ++.+|+.+++.++||.+||.+.+..         .. ..+++||||..|++.
T Consensus       137 ~~~~l~~~~~vVLSDY~KG~L~~-----~q~~I~~ar~~~~pVLvDPKg~Df~---------~Y-~GAtLiTPN~~E~~~  201 (467)
T COG2870         137 IKNALKSFDALVLSDYAKGVLTN-----VQKMIDLAREAGIPVLVDPKGKDFE---------KY-RGATLITPNLKEFEE  201 (467)
T ss_pred             HHHHhhcCCEEEEeccccccchh-----HHHHHHHHHHcCCcEEECCCCcchh---------hh-CCCeecCCCHHHHHH
Confidence            3455678899998   3566643     5788999999999999999995421         11 379999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCC-EEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGA-IVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~-~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa  177 (240)
                      ..|...          +.+++.+.+++|.+.++- .+++| +..++ ++..++..++|.....+.+++|+||+..+.+|+
T Consensus       202 ~vg~~~----------~e~el~~~g~kL~~~~~L~alLvTRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~  271 (467)
T COG2870         202 AVGKCK----------SEEELEERGQKLKEELDLSALLVTRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAA  271 (467)
T ss_pred             HHcccc----------cHHHHHHHHHHHHHhhCcceEEEEeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHH
Confidence            999763          447788889999999874 48888 66654 455444477776667788899999999999999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCcccc-HHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASL-RMHMIDC  221 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~-~~~~~~~  221 (240)
                      .++.| .++++||.+|..    |+.....+ .|+..+ ..++...
T Consensus       272 ~laaG-~s~~eAc~lAN~----AagiVVgK-lGTatvs~~EL~nA  310 (467)
T COG2870         272 ALAAG-ASLEEACELANA----AAGIVVGK-LGTATVSPEELEMA  310 (467)
T ss_pred             HHHcC-CCHHHHHHHhhh----hcceEEee-ccceeecHHHHHhh
Confidence            99996 899999887765    44455554 455554 4444443

>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP

Probab=99.73  E-value=2.5e-16  Score=134.18  Aligned_cols=157  Identities=23%  Similarity=0.184  Sum_probs=116.6

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|++++....+    .+.+..+++.+++.+.++++||....     . ...+++ ..+++++||..|++.|++.
T Consensus       124 ~~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~-----~-~~~~~~-~~~dil~~n~~E~~~l~~~  192 (292)
T cd01174         124 LELIAAADVLLLQLEIP----LETVLAALRAARRAGVTVILNPAPAR-----P-LPAELL-ALVDILVPNETEAALLTGI  192 (292)
T ss_pred             HHhcccCCEEEEeCCCC----HHHHHHHHHHHHhcCCEEEEeCCCcC-----c-CcHHHH-hhCCEEeeCHHHHHHHhCC
Confidence            34577899998863322    35667888889999999999997521     1 113455 3789999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      +.         .+.+++.+.++.+.+.+...|++| |..+. ++++++.++++..+....+++|+||+|.|.+...+.++
T Consensus       193 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g  263 (292)
T cd01174         193 EV---------TDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARG  263 (292)
T ss_pred             CC---------CCHHHHHHHHHHHHHcCCCEEEEEeCCCceEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcC
Confidence            64         344566777888877776678888 77654 45666667777555556688999999988888888885


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+++++|..+++.+..
T Consensus       264 -~~~~~al~~a~~~Aa~~~~  282 (292)
T cd01174         264 -LSLEEAIRFANAAAALSVT  282 (292)
T ss_pred             -CCHHHHHHHHHHHHHHHhc
Confidence             8999999999987665543

This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.

>PTZ00344 pyridoxal kinase; Provisional

Probab=99.72  E-value=6.3e-16  Score=132.44  Aligned_cols=161  Identities=23%  Similarity=0.191  Sum_probs=109.2

Q ss_pred             EEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCccc-chHH----HHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           34 LYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGF-RLNA----CLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        34 vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~-~~~~----~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      .++..|++ +.+..+.+.+.++.+++.+  +++|+||++.+.+.+ ..+.    .++++ ..++++|||..|++.|+|.+
T Consensus        79 ~~v~sG~l~~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~ll-~~~dii~pN~~E~~~L~g~~  157 (296)
T PTZ00344         79 TYVLTGYINSADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYVKEEVVDAYRELI-PYADVITPNQFEASLLSGVE  157 (296)
T ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEeCHHHHHHHHHHh-hhCCEEeCCHHHHHHHhCCC
Confidence            33446885 4334444444444444444  479999999654332 1111    23344 37999999999999999976


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC----cc----EE-E--cC----cEEEEEecCCccCCCccchhhH
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA----VD----IV-T--DG----RRVVGAHNGVPMMQKITATGCS  170 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~----~~----~i-~--~~----~~~~~~~~~~~~~~~~~GaGD~  170 (240)
                      .         .+.+++.++++++.+.+...||+||.    .+    .+ .  +.    ++.|....+... .+++||||+
T Consensus       158 ~---------~~~~~~~~~~~~l~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~  227 (296)
T PTZ00344        158 V---------KDLSDALEAIDWFHEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDL  227 (296)
T ss_pred             C---------CCHHHHHHHHHHHHHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHH
Confidence            5         45567778888888776667888832    21    22 2  21    334555544333 355999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      |+|++++++..+  ++.+|+++|..+...+++.+...
T Consensus       228 f~A~~~a~l~~g--~~~~a~~~A~a~~~~~i~~~~~~  262 (296)
T PTZ00344        228 FAALLLAFSHQH--PMDLAVGKAMGVLQDIIKATRES  262 (296)
T ss_pred             HHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998874  89999999999999999987764

>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]

Probab=99.72  E-value=7.2e-16  Score=128.02  Aligned_cols=166  Identities=20%  Similarity=0.148  Sum_probs=123.8

Q ss_pred             hhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCcccchH-----H-HHHHhccCCeEEcCCHHH
Q 026308           27 FTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGFRLN-----A-CLELVQLKPTVIRGNASE   97 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~~~~-----~-~~~~~~~~~~vitPN~~E   97 (240)
                      .+..+|+|+  +|++ +.++.+.+..+++..|+.+  ..+++||+|.+.++..-.     . ..+++ +.+++||||..|
T Consensus        70 ~~~~~davl--tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~li-p~AdiiTPN~fE  146 (281)
T COG2240          70 KLGECDAVL--TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELL-PLADIITPNIFE  146 (281)
T ss_pred             cccccCEEE--EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhc-chhhEeCCCHHH
Confidence            445789998  6785 6667777788888777774  459999999988764211     1 12344 489999999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcC---cEEEEEecCCccCCCccch
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDG---RRVVGAHNGVPMMQKITAT  167 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~---~~~~~~~~~~~~~~~~~Ga  167 (240)
                      ++.|+|.++         ++.+++.++++.|.+.+...||+|+..       .+++..   +..+++. + .....+.|+
T Consensus       147 Le~Ltg~~~---------~~~~da~~aa~~L~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~-~v~~~~~Gt  215 (281)
T COG2240         147 LEILTGKPL---------NTLDDAVKAARKLGADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-P-LVPFIPNGT  215 (281)
T ss_pred             HHHHhCCCC---------CCHHHHHHHHHHHhhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-h-cCCCCCCCc
Confidence            999999987         678999999999999888889999541       133322   2334332 1 122347999


Q ss_pred             hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      ||.|+|++.+.+..+ .+..+|+..+..+.........+.
T Consensus       216 GDL~sallla~lL~g-~~~~~al~~~~~~V~evl~~T~~~  254 (281)
T COG2240         216 GDLFSALLLARLLEG-LSLTQALERATAAVYEVLQETQKL  254 (281)
T ss_pred             hHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999988886 799999999998888777766554

>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I

Probab=99.71  E-value=5.7e-16  Score=133.51  Aligned_cols=157  Identities=18%  Similarity=0.121  Sum_probs=113.5

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|++++..........+.+..+++.+++.++++++||.+.     .    ...+ .++++++||..|++.|++.
T Consensus       138 ~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~-----~----~~~~-~~~d~l~~n~~E~~~l~~~  207 (315)
T TIGR02198       138 REQLASADAVVLSDYAKGVLTPRVVQEVIAAARKHGKPVLVDPKGK-----D----FSRY-RGATLITPNRKEAEAAVGA  207 (315)
T ss_pred             HhhhhhCCEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCc-----c----hhhc-CCCcEECCCHHHHHHHhCC
Confidence            3456789999985221222223567788899999999999999852     1    1223 3789999999999999983


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCccE-EEc-CcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVDI-VTD-GRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~~-i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                       .         .+.++..+.++++.++.+ ..|++| |..+. +++ ++..++++..+..+.+++|+||+|+|.+.+.+.
T Consensus       208 -~---------~~~~~~~~~~~~l~~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~  277 (315)
T TIGR02198       208 -C---------DTEAELVQAAEKLLEELDLEALLVTRSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALA  277 (315)
T ss_pred             -C---------CCHHHHHHHHHHHHHHcCCCEEEEEcCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHH
Confidence             2         234566777777776554 568888 77654 445 345666665555567889999999999998888


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++ .++.+|+++|+.+++.+.+
T Consensus       278 ~g-~~~~~al~~A~~~aa~~~~  298 (315)
T TIGR02198       278 AG-ASLEEACRLANAAAGVVVG  298 (315)
T ss_pred             cC-CCHHHHHHHHHHHhhhhhc
Confidence            86 8999999999887665444

RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose.

>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)

Probab=99.70  E-value=1.2e-15  Score=129.97  Aligned_cols=162  Identities=20%  Similarity=0.036  Sum_probs=114.4

Q ss_pred             hhhcccCcEEEecCC-CCCCh--HHHHHHHHHHHHhcCCCEEEcccccCCc--cc-chHHHHHHhccCCeEEcCCHHHHH
Q 026308           26 DFTPHVRALYVNVGT-LSANW--LPSMKAAAQLASQLGKPWVLDPVAAGAS--GF-RLNACLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~~~--~~~~~~~~~~~~~~~~~vvlDp~~~~~~--~~-~~~~~~~~~~~~~~vitPN~~E~~   99 (240)
                      +.++++|++++. |. +....  .+.+..+++.+++.++++++||......  .. .....++++ ..+++++||..|++
T Consensus       120 ~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~-~~~dil~~n~~E~~  197 (294)
T cd01166         120 AALAGADHLHLS-GITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELL-PYVDIVLPSEEEAE  197 (294)
T ss_pred             HHHhCCCEEEEc-CcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHH-HhCCEEEcCHHHHH
Confidence            456789999886 44 22222  3667788888888999999999863211  00 011223444 37999999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa  177 (240)
                      .|++.+.           .++..+.++++ +++...|++| |..+ +++++++.++++..+....+++|+||+|+|++++
T Consensus       198 ~l~~~~~-----------~~~~~~~~~~l-~~g~~~viit~G~~G~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~  265 (294)
T cd01166         198 ALLGDED-----------PTDAAERALAL-ALGVKAVVVKLGAEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLA  265 (294)
T ss_pred             HHhCCCC-----------chhHHHHHHhh-cCCccEEEEEEcCCceEEEECCceEEeCCCCcccccCCCchHHHHHHHHH
Confidence            9998642           23455566666 4555568888 7655 4556666777776555567889999999999999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++++ .++.+|+++|..+++.+.+
T Consensus       266 ~l~~g-~~~~~a~~~a~~~aa~~i~  289 (294)
T cd01166         266 GLLEG-WDLEEALRFANAAAALVVT  289 (294)
T ss_pred             HHHcC-CCHHHHHHHHHHHHHHHHh
Confidence            99986 8999999999987665544

KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.

>PRK11142 ribokinase; Provisional

Probab=99.70  E-value=5.3e-16  Score=133.14  Aligned_cols=157  Identities=22%  Similarity=0.189  Sum_probs=114.8

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.++++++..+.+    .+.+..+++.+++.++++++||....  ..    ...++ ..+++++||..|++.++|.
T Consensus       127 ~~~l~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~d~~~~~--~~----~~~~~-~~~dil~~n~~Ea~~l~g~  195 (306)
T PRK11142        127 RELIANADALLMQLETP----LETVLAAAKIAKQHGTKVILNPAPAR--EL----PDELL-ALVDIITPNETEAEKLTGI  195 (306)
T ss_pred             HhhhccCCEEEEeCCCC----HHHHHHHHHHHHHcCCEEEEECCCCc--cc----CHHHH-hhCCEEcCCHHHHHHHhCC
Confidence            35577899998864322    35567788889999999999997421  01    12344 3789999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccEE-EcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDIV-TDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~i-~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      +.         .+.++..+.++.+.+.+...||+| |..+.+ .++++.++.+.++..+.+++|+||+|.|.+...+.++
T Consensus       196 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g  266 (306)
T PRK11142        196 RV---------EDDDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEG  266 (306)
T ss_pred             CC---------CChHHHHHHHHHHHHhCCCeEEEEECCCcEEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCC
Confidence            54         344566677777777666678888 877654 4555666666555566788999999988888888885


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+|+++|+.+++....
T Consensus       267 -~~~~~al~~a~~~Aa~~~~  285 (306)
T PRK11142        267 -KPLPEAIRFAHAAAAIAVT  285 (306)
T ss_pred             -CCHHHHHHHHHHHHHHHcC
Confidence             7999999999987665443

>TIGR02152 D_ribokin_bact ribokinase

Probab=99.69  E-value=1.3e-15  Score=130.02  Aligned_cols=158  Identities=20%  Similarity=0.125  Sum_probs=115.1

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.+..+|++++....+    .+.+..+++.+++.++++++||...     ......+++ ..+++++||..|++.|++.
T Consensus       119 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~D~~~~-----~~~~~~~~~-~~~d~l~~n~~E~~~l~~~  188 (293)
T TIGR02152       119 EALIAESDIVLLQLEIP----LETVLEAAKIAKKHGVKVILNPAPA-----IKDLDDELL-SLVDIITPNETEAEILTGI  188 (293)
T ss_pred             HhhhccCCEEEEecCCC----HHHHHHHHHHHHHcCCEEEEECCcC-----cccchHHHH-hcCCEEccCHHHHHHHhCC
Confidence            34567889998864322    3556788888899999999999752     111113455 3789999999999999987


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      ..         .+.++..+.++.+.+.+...|++| |..+. +++++..++.+..+....+++|+||+|.+.+...+..+
T Consensus       189 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g  259 (293)
T TIGR02152       189 EV---------TDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEG  259 (293)
T ss_pred             CC---------CCcchHHHHHHHHHHcCCCeEEEEeCCCceEEEeCCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCC
Confidence            54         234456677777877655568888 77654 45666666666555556678999999988888888885


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+|+++|+.++..+..
T Consensus       260 -~~~~~al~~a~~~Aa~~~~  278 (293)
T TIGR02152       260 -KSLEDAIRFANAAAAISVT  278 (293)
T ss_pred             -CCHHHHHHHHHHHHHHHHc
Confidence             7999999999987666554

This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.

>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose

Probab=99.69  E-value=1.4e-15  Score=130.37  Aligned_cols=155  Identities=17%  Similarity=0.122  Sum_probs=114.1

Q ss_pred             hhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           26 DFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      +.++++|++++. |+. .....+.+..+++.+++.++++++||....     .    ..+ ..+++++||..|++.+++.
T Consensus       130 ~~l~~~~~v~~s-~~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~-----~----~~~-~~~d~l~~n~~E~~~l~~~  198 (304)
T cd01172         130 ERLPEADVVILS-DYGKGVLTPRVIEALIAAARELGIPVLVDPKGRD-----Y----SKY-RGATLLTPNEKEAREALGD  198 (304)
T ss_pred             HhhccCCEEEEE-cCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcc-----h----hhc-cCCcEeCCCHHHHHHHhCC
Confidence            456889999984 432 111235667888889999999999997621     1    233 3789999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEe-cCcc-EEEc-CcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEAS-GAIVAVS-GAVD-IVTD-GRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~-~~~Vvit-G~~~-~i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      +.         .+.+++.+.++++.++. ...||+| |..+ ++++ +++.++++..+..+.+++||||+|.|.+...+.
T Consensus       199 ~~---------~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~  269 (304)
T cd01172         199 EI---------NDDDELEAAGEKLLELLNLEALLVTLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALA  269 (304)
T ss_pred             CC---------CChHHHHHHHHHHHHHhCCCeEEEEcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHH
Confidence            54         34456667777776554 4468888 7765 4555 566777776655677889999999888888888


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      ++ .++.+|+++|+.+++.+.
T Consensus       270 ~g-~~~~~al~~a~a~Aa~~~  289 (304)
T cd01172         270 AG-ADLEEAAFLANAAAGVVV  289 (304)
T ss_pred             cC-CCHHHHHHHHHHHhheee
Confidence            85 899999999998766443

LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.

>PTZ00247 adenosine kinase; Provisional

Probab=99.69  E-value=1.4e-15  Score=133.00  Aligned_cols=164  Identities=16%  Similarity=0.119  Sum_probs=111.8

Q ss_pred             hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      +.++++++++++ |. +. ...+.+..+++.+++.++++++|+..............++++ .+|+++||..|++.|+|.
T Consensus       155 ~~l~~~~~v~~~-g~~~~-~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~-~~Dil~~N~~Ea~~l~g~  231 (345)
T PTZ00247        155 EAIKTAQLYYLE-GFFLT-VSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLP-YVDILFGNEEEAKTFAKA  231 (345)
T ss_pred             HHHhhCCEEEEE-EEEec-ccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh-hCCEEEeCHHHHHHHhhc
Confidence            367889999997 43 22 123667888999999999999997531100000112345554 799999999999999984


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHh------cCCEEEEe-cCccE-EEcCcEEEEEecCCc---cCCCccchhhHHHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEA------SGAIVAVS-GAVDI-VTDGRRVVGAHNGVP---MMQKITATGCSVTA  173 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~------~~~~Vvit-G~~~~-i~~~~~~~~~~~~~~---~~~~~~GaGD~lag  173 (240)
                      ..         .+.++..+.++.+.+.      +...||+| |..+. ++++++.++++..+.   .+.+++||||+|.|
T Consensus       232 ~~---------~~~~~~~~~~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~a  302 (345)
T PTZ00247        232 MK---------WDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVG  302 (345)
T ss_pred             cC---------CCccCHHHHHHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHH
Confidence            21         1112344555555431      23468888 87664 556666666664443   35688999999988


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+.+.+.++ .++.+++++|+..++.+..
T Consensus       303 gfl~~l~~g-~~~~~al~~a~~aAa~~v~  330 (345)
T PTZ00247        303 GFLAQYANG-KDIDRCVEAGHYSAQVIIQ  330 (345)
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHHh
Confidence            888888886 8999999999987766554

>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor

Probab=99.68  E-value=1.9e-15  Score=130.22  Aligned_cols=162  Identities=20%  Similarity=0.105  Sum_probs=114.9

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.++++|+++++.-.+... .+.+..+++.+++.++++++||..........+...+++ .++++++||..|++.|+|.+
T Consensus       141 ~~l~~~~~v~~~~~~~~~~-~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l-~~~d~l~~n~~E~~~l~~~~  218 (312)
T cd01168         141 SLLAKAKYLYLEGYLLTVP-PEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELL-PYVDILFGNEEEAEALAEAE  218 (312)
T ss_pred             HHHccCCEEEEEEEecCCC-HHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHH-hhCCEEEeCHHHHHHHhCCC
Confidence            4577899999863222111 266788889899999999999964110000011234555 47999999999999999853


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEecCC-ccCCCccchhhHHHHHHHHHHhcC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHNGV-PMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~~~-~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      .            ++..+.++++.+++...||+| |..+. ++++++.++++..+ ..+.+++|+||+|.|.+...+.++
T Consensus       219 ~------------~~~~~~a~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g  286 (312)
T cd01168         219 T------------TDDLEAALKLLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQG  286 (312)
T ss_pred             C------------CChHHHHHHHHhcCCCEEEEecCCCCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcC
Confidence            2            123456777877776678888 77654 45666677777555 456788999999988888888885


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+++++|+.+++.+..
T Consensus       287 -~~~~~a~~~a~~~Aa~~v~  305 (312)
T cd01168         287 -EPLEECIRLGSYAAAEVIQ  305 (312)
T ss_pred             -CCHHHHHHHHHHHHHHHHh
Confidence             8999999999988776654

The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.

>PRK09850 pseudouridine kinase; Provisional

Probab=99.68  E-value=6e-15  Score=127.27  Aligned_cols=174  Identities=14%  Similarity=0.081  Sum_probs=117.1

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.++.++++++..+.+    .+.+..+++.  ..++++++||...+    ......++++ .+++++||..|++.|+|..
T Consensus       130 ~~~~~~~~v~~~~~~~----~~~~~~~~~~--~~g~~v~~D~~~~~----~~~~~~~~l~-~~dil~~N~~Ea~~l~g~~  198 (313)
T PRK09850        130 EFIQRAKVIVADCNIS----EEALAWILDN--AANVPVFVDPVSAW----KCVKVRDRLN-QIHTLKPNRLEAETLSGIA  198 (313)
T ss_pred             HHHhcCCEEEEeCCCC----HHHHHHHHHh--ccCCCEEEEcCCHH----HHHHHHhhhc-cceEEccCHHHHHHHhCCC
Confidence            4467889888864432    2344555543  25789999998521    1112345553 7999999999999999975


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccEE-EcC-cEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDIV-TDG-RRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~i-~~~-~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      .         .+.+++.++++.|.+.+...||+| |..+.+ +++ +...+.+..+....+++||||+|.|.+.+.+.+|
T Consensus       199 ~---------~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g  269 (313)
T PRK09850        199 L---------SGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDG  269 (313)
T ss_pred             C---------CCHHHHHHHHHHHHHcCCCEEEEEeCCceEEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcC
Confidence            4         334566777777766655568888 887644 443 2333455445556688999999999888888886


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHh
Q 026308          183 PLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLH  223 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~  223 (240)
                       .++.+|+++|+.+++.+...   ...+.+.+..+.++.+.
T Consensus       270 -~~~~eal~~a~a~aa~~~~~---~~~~~~~~~~~~~~~~~  306 (313)
T PRK09850        270 -MPFAESVRFAQGCSSMALSC---EYTNNPDLSIANVISLV  306 (313)
T ss_pred             -CCHHHHHHHHHHHHHHHhcC---CCCCCcccCHHHHHHHH
Confidence             89999999999887766542   12345566555555443

>PLN02341 pfkB-type carbohydrate kinase family protein

Probab=99.66  E-value=5.1e-15  Score=134.28  Aligned_cols=162  Identities=21%  Similarity=0.149  Sum_probs=116.3

Q ss_pred             hhhhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCc---cc--chHHHHHHhccCCeEEcCCHHH
Q 026308           24 IPDFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS---GF--RLNACLELVQLKPTVIRGNASE   97 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~---~~--~~~~~~~~~~~~~~vitPN~~E   97 (240)
                      ..+.++.+|+++++ |+ +.+...+.+..+++.+++.++++++||......   +.  ......++++ .+|+++||..|
T Consensus       218 ~~~~l~~adiv~ls-g~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~-~~Dil~~Ne~E  295 (470)
T PLN02341        218 AKMAIRQSKALFCN-GYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLR-MSDVLLLTSEE  295 (470)
T ss_pred             HHhhhhcCCEEEEe-ceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHh-hCCEEEecHHH
Confidence            34567889999986 54 333335677888999999999999999652100   00  1112345554 78999999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcC--CEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHH
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASG--AIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTA  173 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~--~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag  173 (240)
                      ++.|+|.+           +   ..+.++.|.+++.  ..||+| |..+ +++++++.++++..+..+.+++|+||+|.|
T Consensus       296 a~~l~g~~-----------~---~~~a~~~l~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~A  361 (470)
T PLN02341        296 AEALTGIR-----------N---PILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAA  361 (470)
T ss_pred             HHHHhCCC-----------C---HHHHHHHHHhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHH
Confidence            99999852           1   2345666765542  468888 8765 456667777777666667788999999998


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+...+..+ .++.+++++|+.+.+.+..
T Consensus       362 gfl~gll~G-~~l~eal~~A~a~aA~~v~  389 (470)
T PLN02341        362 AIALGYIHN-LPLVNTLTLANAVGAATAM  389 (470)
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            888888886 8999999999987665443

>PTZ00292 ribokinase; Provisional

Probab=99.66  E-value=3.8e-15  Score=129.10  Aligned_cols=160  Identities=16%  Similarity=0.110  Sum_probs=112.6

Q ss_pred             hhcc-cCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           27 FTPH-VRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        27 ~~~~-~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      .+.+ ++++++....+    .+.+.++++.+++.++++++||...... .......++++ .+++++||..|++.|+|..
T Consensus       143 ~i~~~~~~~~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~-~~dii~~n~~E~~~l~g~~  216 (326)
T PTZ00292        143 NIQNICKYLICQNEIP----LETTLDALKEAKERGCYTVFNPAPAPKL-AEVEIIKPFLK-YVSLFCVNEVEAALITGME  216 (326)
T ss_pred             HhhhhCCEEEECCCCC----HHHHHHHHHHHHHcCCEEEEECCCCccc-cccccHHHHHh-cCCEEcCCHHHHHHHhCCC
Confidence            3556 88888753322    2455677888889999999999753211 00122345554 7999999999999999875


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcE-EEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRR-VVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~-~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      .         .+.+++.+.++.+.+.+...||+| |..+. ++++++ .++++.....+.+++|+||+|.|.+...+..+
T Consensus       217 ~---------~~~~~~~~~~~~l~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g  287 (326)
T PTZ00292        217 V---------TDTESAFKASKELQQLGVENVIITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRG  287 (326)
T ss_pred             C---------CChhHHHHHHHHHHHcCCCeEEEEeCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCC
Confidence            4         344556666777776666678888 87664 445443 46666555566788999999988888888885


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+++++|+.+++.+..
T Consensus       288 -~~~~~al~~a~a~Aa~~v~  306 (326)
T PTZ00292        288 -KDLKESCKRANRIAAISVT  306 (326)
T ss_pred             -CCHHHHHHHHHHHHHHHcC
Confidence             8999999999987665443

>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group

Probab=99.66  E-value=6.5e-15  Score=118.04  Aligned_cols=151  Identities=25%  Similarity=0.175  Sum_probs=104.1

Q ss_pred             hhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHH
Q 026308            4 VANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLEL   83 (240)
Q Consensus         4 ~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~   83 (240)
                      +|.++-.+|.++.+.-           +|+++++...+.   .+.+.++++.+++.++++++||.+......+. ...++
T Consensus        42 ~a~~l~~LG~~~~~~~-----------~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~-~~~~~  106 (196)
T cd00287          42 VAVALARLGVSVTLVG-----------ADAVVISGLSPA---PEAVLDALEEARRRGVPVVLDPGPRAVRLDGE-ELEKL  106 (196)
T ss_pred             HHHHHHHCCCcEEEEE-----------ccEEEEecccCc---HHHHHHHHHHHHHcCCeEEEeCCccccccccc-hHHHH
Confidence            4555666666653322           789998643333   35567888889999999999998753222111 12345


Q ss_pred             hccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEc-CcEEEEEecCCcc
Q 026308           84 VQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTD-GRRVVGAHNGVPM  160 (240)
Q Consensus        84 ~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~-~~~~~~~~~~~~~  160 (240)
                      + .++++++||..|++.|++.+.         .+.++..+.++++.+++...|++| |..+ ++++ +++.+.++..+..
T Consensus       107 ~-~~~dvl~~n~~E~~~l~~~~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~  176 (196)
T cd00287         107 L-PGVDILTPNEEEAEALTGRRD---------LEVKEAAEAAALLLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVK  176 (196)
T ss_pred             H-hhCCEECCCHHHHHHHhCCCC---------CChHHHHHHHHHHHhcCCCEEEEEECCCccEEEecCCceEEcCCccCC
Confidence            5 479999999999999999754         334566677888888777778888 7654 5566 6667777655455


Q ss_pred             CCCccchhhHHHHHHHHHH
Q 026308          161 MQKITATGCSVTALIAAFV  179 (240)
Q Consensus       161 ~~~~~GaGD~lag~iaa~l  179 (240)
                      ..+++|+||+|+|.+.+.+
T Consensus       177 ~vdt~GAGD~f~ag~~~~l  195 (196)
T cd00287         177 VVDTTGAGDAFLAALAAGL  195 (196)
T ss_pred             cccCCCchHHHHHHHHHHh
Confidence            6788999999977666543

The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).

>PRK09954 putative kinase; Provisional

Probab=99.66  E-value=9.2e-15  Score=128.62  Aligned_cols=154  Identities=10%  Similarity=0.039  Sum_probs=108.5

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.+..++.++++...+    .+.+..+++.+  .++++++||....    .....+++++ ++++++||..|++.|+|..
T Consensus       183 ~~~~~~~~v~~~~~~~----~~~~~~~~~~a--~~~~v~~D~~~~~----~~~~~~~~l~-~~dil~~n~~Ea~~l~g~~  251 (362)
T PRK09954        183 DLIRHAGVVLADCNLT----AEALEWVFTLA--DEIPVFVDTVSEF----KAGKIKHWLA-HIHTLKPTQPELEILWGQA  251 (362)
T ss_pred             HHHhcCCEEEEECCCC----HHHHHHHHHhC--CCCcEEEECCCHH----Hhhhhhhhhc-cccEEecCHHHHHHHcCCC
Confidence            4456788888875433    23345555543  4789999997521    0112345553 7999999999999999975


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccEEE-c-CcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDIVT-D-GRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~i~-~-~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      .         ++.++..++++.+.+.+...||+| |..+.++ + +++.++++..+..+.+++||||+|.|.+.+.+.+|
T Consensus       252 ~---------~~~~~~~~~~~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Ag~l~~l~~g  322 (362)
T PRK09954        252 I---------TSDADRNAAVNALHQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEG  322 (362)
T ss_pred             C---------CCHHHHHHHHHHHHHcCCCEEEEEeCCccEEEEeCCCceEeccCCCcccccccchHHHHHHHHHHHHHcC
Confidence            4         334556677777877766678888 8876553 3 33355555555566788999999988888888886


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIA  200 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a  200 (240)
                       .++.+++++|+.+++.+
T Consensus       323 -~~~~eal~~a~a~Aal~  339 (362)
T PRK09954        323 -YSFRDSARFAMACAAIS  339 (362)
T ss_pred             -CCHHHHHHHHHHHHHHH
Confidence             89999999999987765

>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]

Probab=99.65  E-value=3.9e-15  Score=121.40  Aligned_cols=162  Identities=19%  Similarity=0.185  Sum_probs=112.1

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCcccch--HHH---HHHhccCCeEEcCCHHHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGFRL--NAC---LELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~~~--~~~---~~~~~~~~~vitPN~~E~~~L  101 (240)
                      .+|+++  +|+. +....+.+..++...++.+  ..+|+||++.+.+.+.-  +..   ++++.+.+++||||+.|++.|
T Consensus        81 ~Y~~vL--TGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~EiL  158 (308)
T KOG2599|consen   81 KYDAVL--TGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEIL  158 (308)
T ss_pred             ccceee--eeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhhh
Confidence            678888  6784 5555666666777676654  67899999999876532  221   344435689999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecC----c-c--EEE----cCcEEEEEecCCccCCCccchhhH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGA----V-D--IVT----DGRRVVGAHNGVPMMQKITATGCS  170 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~----~-~--~i~----~~~~~~~~~~~~~~~~~~~GaGD~  170 (240)
                      +|.++         .+.++..++.+.|+++|...||+|..    . +  +++    .+.+.+.+.-++ ....++|+||.
T Consensus       159 tg~~I---------~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipk-i~~~FtGTGDL  228 (308)
T KOG2599|consen  159 TGMEI---------RTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPK-IDGVFTGTGDL  228 (308)
T ss_pred             cCCee---------ccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEecc-cceEEecccHH
Confidence            99988         68899999999999999777888832    1 2  222    123344444333 33457999999


Q ss_pred             HHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHh
Q 026308          171 VTALIAAFVAVDP--LHAFEATASALSVYGIAGEM  203 (240)
Q Consensus       171 lag~iaa~la~~~--~~~~~A~~~A~~~~~~a~~~  203 (240)
                      |+|.+.+.+....  .++..|+..+......-+..
T Consensus       229 fsaLLla~~~~~~~~~~l~~a~e~~ls~~~~viqk  263 (308)
T KOG2599|consen  229 FSALLLAWLHESPDNDDLSKAVEQVLSSVQAVIQK  263 (308)
T ss_pred             HHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHH
Confidence            9999999887631  34556666665544444443

>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional

Probab=99.63  E-value=1.5e-14  Score=131.59  Aligned_cols=154  Identities=22%  Similarity=0.234  Sum_probs=111.3

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.+++++++++. ++..+ ..+.+..+++.+++.++++++||.+..   +      ..+ ..+++++||..|++.|+|.
T Consensus       138 ~~~l~~~~~v~is-~~~~~-~~~~~~~~~~~~k~~g~~vv~Dp~~~~---~------~~~-~~~dil~pN~~Ea~~l~g~  205 (473)
T PRK11316        138 EQALPSIGALVLS-DYAKG-ALASVQAMIQLARKAGVPVLIDPKGTD---F------ERY-RGATLLTPNLSEFEAVVGK  205 (473)
T ss_pred             HHHhccCCEEEEe-cCCcc-chhHHHHHHHHHHhcCCeEEEeCCCCC---c------ccc-CCCeEECcCHHHHHHHhCC
Confidence            3456788988884 44321 134567888889999999999997621   1      122 3689999999999999985


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCcc-EEEcCcE-EEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVD-IVTDGRR-VVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~-~i~~~~~-~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      .          .+.++..+.++++.+.++ ..|++| |..+ +++++++ .+.++.......+++||||+|+|++++.++
T Consensus       206 ~----------~~~~~~~~~~~~l~~~~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~  275 (473)
T PRK11316        206 C----------KDEAELVEKGMKLIADYDLSALLVTRSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALA  275 (473)
T ss_pred             C----------CCHHHHHHHHHHHHHhcCCCEEEEEecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHH
Confidence            3          244566677777776655 458888 6655 4455444 456665555566889999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      +| .++.+|+++|+.+++.+.
T Consensus       276 ~g-~~~~~al~~A~a~Aa~~v  295 (473)
T PRK11316        276 AG-NSLEEACALANAAAGVVV  295 (473)
T ss_pred             cC-CCHHHHHHHHHHHHHhhc
Confidence            96 899999999987655443

>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate

Probab=99.62  E-value=2.1e-14  Score=122.45  Aligned_cols=160  Identities=17%  Similarity=0.027  Sum_probs=111.5

Q ss_pred             hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCC--ccc--chHHHHHHhccCCeEEcCCHHHHHH
Q 026308           26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGA--SGF--RLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~--~~~--~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.++.+|+++++.-. .++...+.+.++++.+++.++++++||.....  ...  .....++++ ..+++++||+.|++.
T Consensus       116 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l-~~~d~l~~n~~E~~~  194 (295)
T cd01167         116 DLLSEADILHFGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELL-ELADIVKLSDEELEL  194 (295)
T ss_pred             hHhccCCEEEEechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHH-HhCCEEEecHHHHHH
Confidence            456788999886321 23333456778888899999999999974210  000  011123445 378999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      |+|...           .+   +.++.+.+.+...|++| |..+ +++++++.++++..+....+++|+||+|.|.+.+.
T Consensus       195 l~~~~~-----------~~---~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~a~~~~vvDttGAGD~f~a~~~~~  260 (295)
T cd01167         195 LFGEED-----------PE---EIAALLLLFGLKLVLVTRGADGALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQ  260 (295)
T ss_pred             HhCCCC-----------HH---HHHHHHhhcCCCEEEEecCCcceEEEECCcceeeCCCCcceeeCCCccHHHHHHHHHH
Confidence            998532           22   23455666666678888 7765 45666667777766656678899999999999988


Q ss_pred             HhcCCC-------CHHHHHHHHHHHHHHHH
Q 026308          179 VAVDPL-------HAFEATASALSVYGIAG  201 (240)
Q Consensus       179 la~~~~-------~~~~A~~~A~~~~~~a~  201 (240)
                      ++++ .       ++.+|+++|+.+++.+.
T Consensus       261 l~~g-~~~~~~~~~~~~a~~~a~~~aa~~~  289 (295)
T cd01167         261 LLSR-GLLALDEDELAEALRFANAVGALTC  289 (295)
T ss_pred             HHhC-CcccccHHHHHHHHHHHHHhhHHHh
Confidence            9886 7       78899999988766544

This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.

>PLN02813 pfkB-type carbohydrate kinase family protein

Probab=99.61  E-value=4.2e-14  Score=126.71  Aligned_cols=163  Identities=16%  Similarity=0.047  Sum_probs=114.4

Q ss_pred             hhhhcccCcEEEecCCC--CCChHHHHHHHHHHHHhcCCCEEEcccccCCc-ccchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308           25 PDFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQLGKPWVLDPVAAGAS-GFRLNACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~-~~~~~~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      .+.++.++++++. |+.  .+...+.+.++++.+++.++++++||...... ..+......++ .++|+++||..|+..|
T Consensus       219 ~~~i~~adiv~l~-g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll-~~vDil~~Ne~Ea~~l  296 (426)
T PLN02813        219 ASAISKSRVLVVE-GYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMG-NYADILFANSDEARAL  296 (426)
T ss_pred             HHHHhcCCEEEEE-eeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHH-hcCCEEEeCHHHHHHH
Confidence            4567889999996 431  22334667888899999999999998763211 01111222233 4799999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      +|...           .++..++++.|. ++...||+| |..+. +.++++.++++..+..+.+++||||+|+|.+...+
T Consensus       297 ~g~~~-----------~~~~~~a~~~L~-~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Agfl~~l  364 (426)
T PLN02813        297 CGLGS-----------EESPESATRYLS-HFCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGL  364 (426)
T ss_pred             hCCCC-----------CCCHHHHHHHHH-cCCCEEEEEeCCCCeEEEECCEEEEeCCCCCCcccCCChHHHHHHHHHHHH
Confidence            98632           122344555554 455668888 87664 55666777777655566788999999998888888


Q ss_pred             hcCCC-CHHHHHHHHHHHHHHHHH
Q 026308          180 AVDPL-HAFEATASALSVYGIAGE  202 (240)
Q Consensus       180 a~~~~-~~~~A~~~A~~~~~~a~~  202 (240)
                      .+| . ++.+++++|+..++.+..
T Consensus       365 ~~G-~~~l~~al~~A~a~Aa~~v~  387 (426)
T PLN02813        365 LRG-VSDLRGMGELAARVAATVVG  387 (426)
T ss_pred             HcC-CCCHHHHHHHHHHHHHHHHc
Confidence            885 8 899999999987665544

>cd01941 YeiC_kinase_like YeiC-like sugar kinase

Probab=99.61  E-value=6.3e-14  Score=119.13  Aligned_cols=159  Identities=18%  Similarity=0.174  Sum_probs=109.1

Q ss_pred             hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308           24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      +.+.+..++++++. |..+   .+.+..+++.+++.+.++++||.....  ..  ...+++ ..+++|+||..|+..++|
T Consensus       122 ~~~~l~~~~~v~~~-~~~~---~~~~~~~~~~a~~~~~~v~~d~~~~~~--~~--~~~~~~-~~~dii~~n~~E~~~~~~  192 (288)
T cd01941         122 IREALKEAKPIVVD-ANLP---EEALEYLLALAAKHGVPVAFEPTSAPK--LK--KLFYLL-HAIDLLTPNRAELEALAG  192 (288)
T ss_pred             HHHHHhcCCEEEEe-CCCC---HHHHHHHHHhhhhcCCcEEEEccchHH--hc--cchhhc-ccceEEeCCHHHHHHHhC
Confidence            34557789999875 3332   235577788888889999999864210  00  001244 479999999999999998


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcC---cEEEEEec-CCccCCCccchhhHHHHHHHH
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDG---RRVVGAHN-GVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~---~~~~~~~~-~~~~~~~~~GaGD~lag~iaa  177 (240)
                      ...         .+.++....++.+.+.+...|++| |..+ +++++   +..++++. ....+.+++|+||+|.|++..
T Consensus       193 ~~~---------~~~~~~~~~~~~~~~~~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~  263 (288)
T cd01941         193 ALI---------ENNEDENKAAKILLLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVA  263 (288)
T ss_pred             ccc---------CCchhHHHHHHHHHHcCCcEEEEEeCCCcEEEEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHH
Confidence            653         122233344555555555568888 7765 44554   44566665 245566889999999999888


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      .++++ .++.+|+++|+..++.+.
T Consensus       264 ~l~~g-~~~~~al~~a~~~Aa~~~  286 (288)
T cd01941         264 GLLEG-MSLDDSLRFAQAAAALTL  286 (288)
T ss_pred             HHHcC-CCHHHHHHHHHHHHHHHh
Confidence            88886 799999999998766543

Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases

Probab=99.60  E-value=5.5e-14  Score=119.98  Aligned_cols=163  Identities=18%  Similarity=0.087  Sum_probs=120.1

Q ss_pred             hhhhcccCcEEEec-CCCCCChHHHHHHHHHHHHhcC--CCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308           25 PDFTPHVRALYVNV-GTLSANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        25 ~~~~~~~d~vvi~~-G~~~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      .+.+...+++++.. -+......+.+..+.+.+++.+  .+++.|+....    ..+...+++ ..+++++||..|+..|
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~dil~~n~~E~~~l  196 (301)
T PF00294_consen  122 EEAIDEADILHLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSWDD----LREDLKELL-PYADILKPNEEEAEAL  196 (301)
T ss_dssp             HHHHHTESEEEEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGSHH----HHHHHHHHH-HTSSEEEEEHHHHHHH
T ss_pred             ccccccccceeecccccccccccceeeecccccccccccccccccccccc----cchhhhhhc-cccchhcccccccccc
Confidence            34667899999974 1234444566677777777777  46666766521    123345666 5899999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEec-CCccCCCccchhhHHHHHHHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHN-GVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~-~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      ++...         .+.+++.+.++++.+++...+++| |..+. ++++++.+++++ +...+.+++|+||+|.|++...
T Consensus       197 ~~~~~---------~~~~~~~~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~A~~i~~  267 (301)
T PF00294_consen  197 TGSKI---------DDPEDALAALRELQARGVKIVIVTLGEDGALYYTNDESYHVPPVPPVNVVDTTGAGDAFAAGFIYG  267 (301)
T ss_dssp             HTCST---------SSHHHHHHHHHHHHHTTSSEEEEEEGGGEEEEEETTEEEEEEEESSSSSSSCTTHHHHHHHHHHHH
T ss_pred             ccccc---------cchhhhhccccccchhhhhhhhccccccCcccccccccccccccccccccceeccchhhhHHHHHH
Confidence            99864         467888888888888888888888 87664 455667777665 4566778899999998888888


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          179 VAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       179 la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +..+ .++.+|+++|...++.+.+
T Consensus       268 l~~~-~~~~~a~~~a~~~aa~~v~  290 (301)
T PF00294_consen  268 LLSG-MSLEEALKFANAAAALKVQ  290 (301)
T ss_dssp             HHTT-HHHHHHHHHHHHHHHHHHT
T ss_pred             HHcC-CCHHHHHHHHHHHHHHHhC
Confidence            8885 7999999999987665544

The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B ....

>PLN02548 adenosine kinase

Probab=99.59  E-value=8.3e-14  Score=121.08  Aligned_cols=165  Identities=14%  Similarity=0.102  Sum_probs=107.1

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.+..+|+++++ |+......+.+..+++.+++.+.++++|+....+........+++++ .+++++||..|++.|+|..
T Consensus       144 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~dil~~n~~E~~~l~g~~  221 (332)
T PLN02548        144 ALVEKAKFYYIA-GFFLTVSPESIMLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALP-YVDFLFGNETEARTFAKVQ  221 (332)
T ss_pred             hHHhhCCEEEEE-EEEccCCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhHHHHHHHHh-hCCEEEecHHHHHHHhCcc
Confidence            346788999885 54211223556778888888998888888531110000112345553 6899999999999999864


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHh------cCCEEEEe-cCccE-EEcCcEEEEEecC---CccCCCccchhhHHHHH
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEA------SGAIVAVS-GAVDI-VTDGRRVVGAHNG---VPMMQKITATGCSVTAL  174 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~------~~~~Vvit-G~~~~-i~~~~~~~~~~~~---~~~~~~~~GaGD~lag~  174 (240)
                      .         .+.++..+.++++.+.      +...||+| |..+. ++++++.++++..   ...+.+++||||+|.|.
T Consensus       222 ~---------~~~~~~~~~~~~l~~~~~~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag  292 (332)
T PLN02548        222 G---------WETEDVEEIALKISALPKASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGG  292 (332)
T ss_pred             C---------CCcccHHHHHHHHHHhhhhccccCCEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHH
Confidence            2         1112233333334332      23458888 87664 4566666665531   22456889999999888


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          175 IAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       175 iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +...+.++ .++.+++++|+.+++.+.+
T Consensus       293 ~l~~l~~g-~~l~eal~~a~aaAa~~v~  319 (332)
T PLN02548        293 FLSQLVQG-KDIEECVRAGNYAANVIIQ  319 (332)
T ss_pred             HHHHHHcC-CCHHHHHHHHHHHHHHHHh
Confidence            88888886 8999999999987776554

>PLN02379 pfkB-type carbohydrate kinase family protein

Probab=99.59  E-value=1.1e-13  Score=121.98  Aligned_cols=160  Identities=20%  Similarity=0.124  Sum_probs=110.4

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCc-ccchHHHHHHhc-cCCeEEcCCHHHHHHHHc
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS-GFRLNACLELVQ-LKPTVIRGNASEIIALSR  103 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~-~~~~~~~~~~~~-~~~~vitPN~~E~~~L~g  103 (240)
                      +.++.++++++.....+   .+.+.++++.+++.++++++|+...... .++ ..+.+++. ..+++|+||+.|+..|++
T Consensus       173 ~~~~~~~~v~v~~~~~~---~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r-~~l~~ll~~~~vDilf~Ne~Ea~~l~~  248 (367)
T PLN02379        173 EDFKGSKWLVLRYGFYN---LEVIEAAIRLAKQEGLSVSLDLASFEMVRNFR-SPLLQLLESGKIDLCFANEDEARELLR  248 (367)
T ss_pred             HHHhcCCEEEEEcccCC---HHHHHHHHHHHHHcCCEEEEeccchhhhhhhh-HHHHHHhhcCCccEEEcCHHHHHHHhc
Confidence            45678999999822222   3567888899999999999999752211 112 22334543 378999999999999997


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCc-cCCCccchhhHHHHHHHHHHh
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP-MMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~-~~~~~~GaGD~lag~iaa~la  180 (240)
                      ...        ..+.+   .+.+ +.+++...+++| |..+ +++++++.++++..++ .+.+++|+||+|+|.+...+.
T Consensus       249 ~~~--------~~~~~---~~~~-~l~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFaagfl~gl~  316 (367)
T PLN02379        249 GEQ--------ESDPE---AALE-FLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFASGFLYGLI  316 (367)
T ss_pred             CCC--------CCCHH---HHHH-HHHhcCCEEEEEECCCCeEEEECCEEEEecCCCCCCcccCCChhHHHHHHHHHHHH
Confidence            532        01222   2333 334455667888 8765 4566667777775542 467889999999888887788


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +| .++.+++++|+..++..++
T Consensus       317 ~G-~~l~~a~~~g~~aAa~vi~  337 (367)
T PLN02379        317 KG-LSLEECCKVGACSGGSVVR  337 (367)
T ss_pred             CC-CCHHHHHHHHHHHHHHHHh
Confidence            85 8999999999987665444

>cd01946 ribokinase_group_C Ribokinase-like subgroup C

Probab=99.56  E-value=1.9e-13  Score=115.76  Aligned_cols=154  Identities=12%  Similarity=0.110  Sum_probs=102.9

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++++++++++ |+. +   +....+++.+++. .++++||...+. .......+++++ .+++++||..|++.|+|.
T Consensus       109 ~~~~~~~~~v~~~-~~~-~---~~~~~~~~~~~~~-~~v~~D~~~~~~-~~~~~~~~~~l~-~~d~~~~n~~E~~~l~g~  180 (277)
T cd01946         109 PEHYKDSEFVFLG-NIA-P---ELQREVLEQVKDP-KLVVMDTMNFWI-SIKPEKLKKVLA-KVDVVIINDGEARQLTGA  180 (277)
T ss_pred             hHHhhcCCEEEEC-CCC-H---HHHHHHHHHHHhC-CEEEEccHHHhh-hhhHHHHHHHhc-cCCEEeCCHHHHHHHhCC
Confidence            3557788999985 543 2   4456677777766 789999854221 111122345564 799999999999999874


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHHhc
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~  181 (240)
                      +              +..+.++.|.+++...|++| |..+ +++++++.++++..+.. ..+++|+||+|+|.+.+.+.+
T Consensus       181 ~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~  246 (277)
T cd01946         181 A--------------NLVKAARLILAMGPKALIIKRGEYGALLFTDDGYFAAPAYPLESVFDPTGAGDTFAGGFIGYLAS  246 (277)
T ss_pred             c--------------hHHHHHHHHHHcCCCEEEEecCCCcEEEEECCceEEcCCcccCccCCCCCchHHHHHHHHHHHHh
Confidence            2              34456677777776778888 7654 45566666766654433 567899999998888888876


Q ss_pred             CC----CCHHHHHHHHHHHHHHH
Q 026308          182 DP----LHAFEATASALSVYGIA  200 (240)
Q Consensus       182 ~~----~~~~~A~~~A~~~~~~a  200 (240)
                      +.    .++.+++++|+..++.+
T Consensus       247 ~~~~~~~~~~~a~~~a~~~aa~~  269 (277)
T cd01946         247 QKDTSEANMRRAIIYGSAMASFC  269 (277)
T ss_pred             CCCcchhhHHHHHHHhHHHHhhh
Confidence            42    23556666666554433

Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.

>cd01945 ribokinase_group_B Ribokinase-like subgroup B

Probab=99.55  E-value=2.3e-13  Score=115.49  Aligned_cols=149  Identities=19%  Similarity=0.070  Sum_probs=107.4

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      .++.+|++++++..+     +...++++.+++.+.++++|.++..   .+.  .+++++ ..++++||..|++.+++...
T Consensus       123 ~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~g~~v~~~~~~~~---~~~--~~~~~~-~~dil~~n~~e~~~l~~~~~  191 (284)
T cd01945         123 ILGGADAVLVDGRQP-----EAALHLAQEARARGIPIPLDLDGGG---LRV--LEELLP-LADHAICSENFLRPNTGSAD  191 (284)
T ss_pred             HhCcCCEEEEcCCCH-----HHHHHHHHHHHHcCCCeeEeccCCc---ccc--hHHHhc-cCCEEEeChhHHhhhcCCCH
Confidence            468899999964322     4456788889999998888776532   211  345553 78999999999999987421


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEc-CcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTD-GRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                                  .   +.++.+.+.+...|++| |..+. +++ +++.++++..+..+.+++|+||+|.|.+...+.++ 
T Consensus       192 ------------~---~~~~~l~~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g-  255 (284)
T cd01945         192 ------------D---EALELLASLGIPFVAVTLGEAGCLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEG-  255 (284)
T ss_pred             ------------H---HHHHHHHhcCCcEEEEEECCCCeEEEcCCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcC-
Confidence                        1   44555555555668888 77654 455 55567776555566788999999999888888886 


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++.+|+++|+.+++.+.+
T Consensus       256 ~~~~~al~~a~~~Aa~~~~  274 (284)
T cd01945         256 MPLREALRFASAAAALKCR  274 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            8999999999987766554

Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .

>PLN02323 probable fructokinase

Probab=99.54  E-value=5.6e-13  Score=115.77  Aligned_cols=161  Identities=14%  Similarity=0.042  Sum_probs=104.9

Q ss_pred             hhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCC---cc-cchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308           27 FTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGA---SG-FRLNACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~---~~-~~~~~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      .++.++++.++.-.+ .+.....+..+++.+++.+.++++||.....   .. .......+++ ..+++++||..|+..+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~l  211 (330)
T PLN02323        133 LIRKAKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIW-DEADIIKVSDEEVEFL  211 (330)
T ss_pred             HHccCCEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHH-HhCCEEEcCHHHHHHH
Confidence            567788776642222 2222344567888889999999999963210   00 0011123444 3799999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      +|...         .+.+++   . ++...+...||+| |..+. ++++++.++++..+....+++|+||+|.|.+.+.+
T Consensus       212 ~g~~~---------~~~~~~---~-~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l  278 (330)
T PLN02323        212 TGGDD---------PDDDTV---V-KLWHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQL  278 (330)
T ss_pred             hCCCC---------ccHHHH---H-HHHhcCCCEEEEecCCCceEEEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHH
Confidence            98643         222222   2 3444455568888 88664 45655566666555566788999999988777777


Q ss_pred             hcCCCC-------HHHHHHHHHHHHHHHHH
Q 026308          180 AVDPLH-------AFEATASALSVYGIAGE  202 (240)
Q Consensus       180 a~~~~~-------~~~A~~~A~~~~~~a~~  202 (240)
                      ..| .+       +.+++++|+++++.+..
T Consensus       279 ~~g-~~~~~~~~~l~~al~~a~a~Aa~~v~  307 (330)
T PLN02323        279 AKD-LSLLEDEERLREALRFANACGAITTT  307 (330)
T ss_pred             HcC-CccccchHHHHHHHHHHHHHHHHHHh
Confidence            775 54       78899999887766554

>cd01944 YegV_kinase_like YegV-like sugar kinase

Probab=99.52  E-value=1.2e-12  Score=111.58  Aligned_cols=158  Identities=15%  Similarity=0.024  Sum_probs=104.0

Q ss_pred             hcccCcEEEecCCCC-CC-hHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           28 TPHVRALYVNVGTLS-AN-WLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~-~~-~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +..+|++.++...+. .. ..+.+.++++.+ +.+.++++||...... .......++++ .+++++||..|++.|+|..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~D~~~~~~~-~~~~~~~~~l~-~~d~~~~n~~E~~~l~g~~  199 (289)
T cd01944         123 VAPYDYVYLSGYTLASENASKVILLEWLEAL-PAGTTLVFDPGPRISD-IPDTILQALMA-KRPIWSCNREEAAIFAERG  199 (289)
T ss_pred             CCCCCEEEEeCccccCcchhHHHHHHHHHhc-cCCCEEEEcCcccccc-cCHHHHHHHHh-cCCEEccCHHHHHHHhCCC
Confidence            457889988633232 22 234455555543 3568999999752110 11223445554 7899999999999999964


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEc-CcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTD-GRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~-~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      .         .+   ....++++.+++...|++| |..+. +.+ ++..++.+..+..+.+++|+||+|+|.+...+.++
T Consensus       200 ~---------~~---~~~~~~~~~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g  267 (289)
T cd01944         200 D---------PA---AEASALRIYAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKG  267 (289)
T ss_pred             C---------cc---hHHHHHHHHhccCCeEEEEECCCcEEEEecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcC
Confidence            2         11   1233556666666678888 77654 445 34456666555566688999999988888778875


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAG  201 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~  201 (240)
                       .++.+|+++|+..++.+.
T Consensus       268 -~~~~~a~~~a~a~aa~~~  285 (289)
T cd01944         268 -MSLADAVLLANAAAAIVV  285 (289)
T ss_pred             -CCHHHHHHHHHHHHHhhh
Confidence             899999999998766544

Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>PRK09434 aminoimidazole riboside kinase; Provisional

Probab=99.50  E-value=1.4e-12  Score=111.82  Aligned_cols=158  Identities=18%  Similarity=0.045  Sum_probs=107.0

Q ss_pred             hcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCc--cc-c-hHHHHHHhccCCeEEcCCHHHHHHH
Q 026308           28 TPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGAS--GF-R-LNACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        28 ~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~--~~-~-~~~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      +..++++.++ ++ . .+.......++++.+++.+.++++||......  .. . ....++++ ..+++++||..|+..|
T Consensus       117 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dil~~n~~e~~~l  194 (304)
T PRK09434        117 FRQGEWLHLC-SIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQAL-ALADVVKLSEEELCFL  194 (304)
T ss_pred             hcCCCEEEEc-cccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHH-HhcceeeCCHHHHHHH
Confidence            4567888775 33 2 22223445677888899999999999742110  00 0 01123344 3789999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEAS-GAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~-~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      +|..           +   ..++++++.+++ ...|++| |..+ +++++++.++++..+....+++|+||+|.|.+...
T Consensus       195 ~g~~-----------~---~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~f~ag~~~~  260 (304)
T PRK09434        195 SGTS-----------Q---LEDAIYALADRYPIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAG  260 (304)
T ss_pred             hCCC-----------C---HHHHHHHHHhhcCCcEEEEEecCCceEEEeCCceeEeCCCCCCCCcCCCchHHHHHHHHHH
Confidence            8852           1   234566776644 3468888 8765 45666667777765556678899999999988888


Q ss_pred             HhcCCC------CHHHHHHHHHHHHHHHHH
Q 026308          179 VAVDPL------HAFEATASALSVYGIAGE  202 (240)
Q Consensus       179 la~~~~------~~~~A~~~A~~~~~~a~~  202 (240)
                      +++| .      ++.+++++|+.+++.+.+
T Consensus       261 l~~g-~~~~~~~~~~~a~~~a~~~Aa~~v~  289 (304)
T PRK09434        261 LSQA-GLWTDEAELAEIIAQAQACGALATT  289 (304)
T ss_pred             HHcC-CCccchHHHHHHHHHHHHHHHHHHc
Confidence            8885 4      677899988887665544

>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like

Probab=99.45  E-value=6e-12  Score=105.73  Aligned_cols=148  Identities=11%  Similarity=-0.035  Sum_probs=104.7

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.++.+|+++++ +...   .+.+.++++.+++.++++++||...+    ......+++ ...+++.+|..|..      
T Consensus       108 ~~~~~~~~v~~~-~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~-~~~d~~~~~~~~~~------  172 (264)
T cd01940         108 EYLSQFDLVHTG-IYSH---EGHLEKALQALVGAGALISFDFSDRW----DDDYLQLVC-PYVDFAFFSASDLS------  172 (264)
T ss_pred             hHHhcCCEEEEc-cccc---HHHHHHHHHHHHHcCCEEEEcCcccC----CHHHHHhhc-ccCCEEEechhhcC------
Confidence            446788999986 4432   24567888889999999999998632    111233444 47899999976531      


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                                  .++..+.++++.+++...||+| |..+ ++.++++.++++..+....+++|+||+|.|.+...+.++ 
T Consensus       173 ------------~~~~~~~~~~l~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g-  239 (264)
T cd01940         173 ------------DEEVKAKLKEAVSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAG-  239 (264)
T ss_pred             ------------cchHHHHHHHHHHcCCCEEEEEECCCCeEEEeCCeEEecCCcCCCCCCCCCchHHHHHHHHHHHHhC-
Confidence                        1234456667766666678888 8866 445666677777555566788999999988888778875 


Q ss_pred             CC-HHHHHHHHHHHHHHHH
Q 026308          184 LH-AFEATASALSVYGIAG  201 (240)
Q Consensus       184 ~~-~~~A~~~A~~~~~~a~  201 (240)
                      .+ +.+++++|+.+++.+.
T Consensus       240 ~~~~~~al~~a~~~aa~~~  258 (264)
T cd01940         240 GTAIAEAMRQGAQFAAKTC  258 (264)
T ss_pred             CchHHHHHHHHHHHHHHHh
Confidence            78 9999999998766544

Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.

>cd01943 MAK32 MAK32 kinase

Probab=99.44  E-value=5.8e-12  Score=109.49  Aligned_cols=165  Identities=14%  Similarity=0.032  Sum_probs=103.4

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHh------cCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQ------LGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~------~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      +..++.+.+. |.... ..+.+..+++.+++      .+.++++||..........+...+++ .++|+++||..|++.|
T Consensus       118 ~~~a~~~hl~-~~~~~-~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l-~~~dil~~n~~Ea~~l  194 (328)
T cd01943         118 LIRSSCIHLI-CSPER-CASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQAL-PRVDVFSPNLEEAARL  194 (328)
T ss_pred             ccCCCeEEEE-CCHHH-HHHHHHHHHHHHHhhccccCCccEEEEecCCcccChhhHHHHHHHh-ccCCEECCCHHHHHHH
Confidence            5577888875 33211 12556778888887      77889999975211000112234555 4799999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHH-----HHHHHHHhcCCEEEEe-cCcc-EEEc--CcEEEEEecCCc---cCCCccchhh
Q 026308          102 SRASVGPTKGVDSSHESMDAME-----AARCLAEASGAIVAVS-GAVD-IVTD--GRRVVGAHNGVP---MMQKITATGC  169 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~-----~a~~l~~~~~~~Vvit-G~~~-~i~~--~~~~~~~~~~~~---~~~~~~GaGD  169 (240)
                      +|....     + .....+...     ...++...+...||+| |..+ ++++  ++..++++..+.   ...+++|+||
T Consensus       195 ~g~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGD  268 (328)
T cd01943         195 LGLPTS-----E-PSSDEEKEAVLQALLFSGILQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGN  268 (328)
T ss_pred             hCCCCC-----C-ccchhhhhhhHHHHHHHhhhccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchH
Confidence            996430     0 000111111     1111233344568888 8765 4445  344556654443   5678899999


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          170 SVTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       170 ~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +|.|.+...+..+ .++.+++++|+..++.+.+
T Consensus       269 aF~agfl~~l~~g-~~~~~al~~a~a~Aa~~v~  300 (328)
T cd01943         269 SFLGGFAAGLALT-KSIDEACIYGSVAASFAIE  300 (328)
T ss_pred             HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            9988888778885 7999999999887665544

MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.

>cd01942 ribokinase_group_A Ribokinase-like subgroup A

Probab=99.44  E-value=5.1e-12  Score=106.91  Aligned_cols=147  Identities=14%  Similarity=0.015  Sum_probs=99.5

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHH---HHH
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEII---ALS  102 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~---~L~  102 (240)
                      +.++.++++.+. +..      .+..+++.+++.++++++||..... ........+++ ..+++++||..|++   .++
T Consensus       122 ~~~~~~~~~~~~-~~~------~~~~~~~~~~~~g~~v~~D~~~~~~-~~~~~~~~~~l-~~~dil~~n~~E~~~l~~~~  192 (279)
T cd01942         122 DPDGLADIVHLS-SGP------GLIELARELAAGGITVSFDPGQELP-RLSGEELEEIL-ERADILFVNDYEAELLKERT  192 (279)
T ss_pred             hhhcccCEEEeC-Cch------HHHHHHHHHHHcCCeEEEcchhhhh-hccHHHHHHHH-hhCCEEecCHHHHHHHHhhc
Confidence            456788888875 322      2456667777889999999975211 01112234555 37999999999995   444


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecC-CccCCCccchhhHHHHHHHHHH
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNG-VPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~-~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      +..           +..   .      ..+...|++| |..+ +++++++.++++.. +..+.+++|+||+|+|.+.+.+
T Consensus       193 ~~~-----------~~~---~------~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l  252 (279)
T cd01942         193 GLS-----------EAE---L------ASGVRVVVVTLGPKGAIVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGL  252 (279)
T ss_pred             CCC-----------hHH---H------hcCCCEEEEEECCCceEEEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHH
Confidence            431           111   0      1344568888 8766 45566667777653 4556788999999999888888


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHH
Q 026308          180 AVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       180 a~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++ .++.+|+++|+..++.+.+
T Consensus       253 ~~g-~~l~~al~~a~~~Aa~~~~  274 (279)
T cd01942         253 LRG-YDLEESLRLGNLAASLKVE  274 (279)
T ss_pred             HcC-CCHHHHHHHHHHHHHHHHc
Confidence            886 7999999999987665543

Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.

>PRK15074 inosine/guanosine kinase; Provisional

Probab=99.43  E-value=1e-11  Score=111.19  Aligned_cols=160  Identities=13%  Similarity=0.023  Sum_probs=102.9

Q ss_pred             hhhcccCcEEEecCC-CC----CChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           26 DFTPHVRALYVNVGT-LS----ANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~----~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.++.++++++. |+ +.    +...+.+.++++.+++.|+++++||..........+...+.+....|+|.||..|+..
T Consensus       182 ~~i~~a~ilyl~-Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~  260 (434)
T PRK15074        182 DVIAGASALVLT-AYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEA  260 (434)
T ss_pred             hHhccCCEEEEe-eeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHH
Confidence            457889999986 54 32    1224667788899999999999999863211111112222232478999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccEE-Ec-Cc------EEE-------------------
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDIV-TD-GR------RVV-------------------  152 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~i-~~-~~------~~~-------------------  152 (240)
                      |+|..           +.+   ++++.+.+ +...|++| |..+.+ .. .+      ..+                   
T Consensus       261 LtG~~-----------d~e---ea~~~L~~-~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (434)
T PRK15074        261 LTGES-----------DPL---LASDKALD-WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAM  325 (434)
T ss_pred             HhCCC-----------CHH---HHHHHHHc-CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccch
Confidence            99842           233   34555553 45568888 887644 32 11      111                   


Q ss_pred             -------------EEecC---CccCCCccchhhHHHHHHHHHHhcCCC--------------------CHHHHHHHHHHH
Q 026308          153 -------------GAHNG---VPMMQKITATGCSVTALIAAFVAVDPL--------------------HAFEATASALSV  196 (240)
Q Consensus       153 -------------~~~~~---~~~~~~~~GaGD~lag~iaa~la~~~~--------------------~~~~A~~~A~~~  196 (240)
                                   ++++.   +..+.+++||||.|+|.+-..+.++ .                    ++.+++++|+.+
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  404 (434)
T PRK15074        326 RKKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITAN-SYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRV  404 (434)
T ss_pred             hccccccccccccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCC-CcccccccccccccccccccCCHHHHHHHHHHH
Confidence                         33332   3345688999999977666666664 4                    688999999887


Q ss_pred             HHHHHH
Q 026308          197 YGIAGE  202 (240)
Q Consensus       197 ~~~a~~  202 (240)
                      ++..+.
T Consensus       405 a~~vi~  410 (434)
T PRK15074        405 SYEVLN  410 (434)
T ss_pred             HHHHHh
Confidence            665544

>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]

Probab=99.41  E-value=1.2e-11  Score=106.55  Aligned_cols=159  Identities=21%  Similarity=0.037  Sum_probs=105.6

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.+...+.+.+..-.+.... +.+..+++.+++.+.++.+|+........ .....+++ ...++++||..|++.|+|. 
T Consensus       125 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~a~~~g~~v~~d~~~~~~~~~-~~~~~~~l-~~~d~~~~n~~E~~~l~g~-  200 (311)
T COG0524         125 DELAGADVLHISGIQLEIPP-EALLAALELAKAAGVTVSFDLNPRPALWD-RELLEELL-ALADILFPNEEEAELLTGL-  200 (311)
T ss_pred             HHHhhcCeeeEEEeecCCCh-HHHHHHHHHHHHcCCeEEEecCCCccccc-hhhHHHHH-hhCCEEeCCHHHHHHHhCC-
Confidence            45567788877533333222 67788899999999999999887421100 12234455 4799999999999999985 


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcE---EEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRR---VVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~---~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      .         .+..   +....+...+...|++| |..+ +++++++   +...+..+..+.+++|+||+|.|.+...+.
T Consensus       201 ~---------~~~~---~~~~~~~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~  268 (311)
T COG0524         201 E---------EDAE---AAAALLLAKGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLL  268 (311)
T ss_pred             C---------ccHH---HHHHHHhhcCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHH
Confidence            1         1112   22244555555668888 8755 4555533   222223344567889999999988888888


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      ++ .++.+++++|+.....+.
T Consensus       269 ~g-~~~~~a~~~a~a~aa~~~  288 (311)
T COG0524         269 EG-KSLEEALRFANAAAALAV  288 (311)
T ss_pred             cC-CCHHHHHHHHHHHhhhhh
Confidence            86 799999999996555443

>cd01937 ribokinase_group_D Ribokinase-like subgroup D

Probab=99.38  E-value=1.3e-11  Score=103.11  Aligned_cols=147  Identities=13%  Similarity=-0.056  Sum_probs=95.9

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCc-ccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS-GFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~-~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      .+..+|.++++ +++..    ....+.+    ...|+++||...... .......++++ ..+++++||..|+..+    
T Consensus       104 ~~~~~~~~~~~-~~~~~----~~~~~~~----~~~~v~~D~~~~~~~~~~~~~~~~~~l-~~~di~~~n~~E~~~~----  169 (254)
T cd01937         104 STITAEIVILG-PVPEE----ISPSLFR----KFAFISLDAQGFLRRANQEKLIKCVIL-KLHDVLKLSRVEAEVI----  169 (254)
T ss_pred             ccCcccEEEEC-CCcch----hcHHHHh----hhhheeEccccceeeccccchHHHhhc-ccCcEEEEcHHHHhhc----
Confidence            45678999885 44321    2223222    227899999752110 00001123455 4899999999999882    


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                                .+.   .++++++.+.+...|++| |..+ +++++++.++.+..+....+++|+||+|+|.+...+.++ 
T Consensus       170 ----------~~~---~~~~~~l~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g-  235 (254)
T cd01937         170 ----------STP---TELARLIKETGVKEIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSG-  235 (254)
T ss_pred             ----------CCH---HHHHHHHHHcCCCEEEEeeCCcceEEEECCccEEccccCceeccCCCchHHHHHHHHHHHHcC-
Confidence                      112   245566666555678888 6654 455666666666555455688999999999888888886 


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAG  201 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~  201 (240)
                      .++.+|+.+|+.++..++
T Consensus       236 ~~~~~a~~~a~~~aa~~i  253 (254)
T cd01937         236 KDIKEAAEFAAAAAAKFI  253 (254)
T ss_pred             CCHHHHHHHHHHHHHHHh
Confidence            799999999998776553

Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.

>PLN02967 kinase

Probab=99.35  E-value=4.7e-11  Score=109.68  Aligned_cols=174  Identities=14%  Similarity=0.070  Sum_probs=103.2

Q ss_pred             hhhcccCcEEEecCC--CCCChHHHHHHHHHHHHhcCCCEEEccccc---CCccc-chHHHHHHhccCCeEEcCCHHHHH
Q 026308           26 DFTPHVRALYVNVGT--LSANWLPSMKAAAQLASQLGKPWVLDPVAA---GASGF-RLNACLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~--~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~---~~~~~-~~~~~~~~~~~~~~vitPN~~E~~   99 (240)
                      +.+..++++.++ |+  .++.....+..+++.+++.|+++++||...   +.... ......+++ ..+++|+||..|+.
T Consensus       331 ~~l~~A~i~hfg-g~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL-~~aDILk~NeeEl~  408 (581)
T PLN02967        331 DVLKEAKMFYFN-THSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAW-NLADIIEVTKQELE  408 (581)
T ss_pred             hHhcCCCEEEEe-CchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHH-HhCCEEEECHHHHH
Confidence            356788998886 43  234344667888899999999999998632   10000 011234555 37999999999999


Q ss_pred             HHHcCCCCCCcCCCCCCC---hH-HHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcE---EEEEecCCcc--CCCccchh
Q 026308          100 ALSRASVGPTKGVDSSHE---SM-DAMEAARCLAEASGAIVAVS-GAVD-IVTDGRR---VVGAHNGVPM--MQKITATG  168 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~---~~-~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~---~~~~~~~~~~--~~~~~GaG  168 (240)
                      .|+|.......... ...   .. ...+.++.+.+.+...|++| |..+ +++.++.   +..++.....  +.+++|||
T Consensus       409 ~LtG~~~~~e~~~~-~~~~~~~~~~~~e~a~~l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAG  487 (581)
T PLN02967        409 FLCGIEPTEEFDTK-DNDKSKFVHYSPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASG  487 (581)
T ss_pred             HHhCCCcccccccc-ccchhccccchHHHHHHHHhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchh
Confidence            99985310000000 000   00 00123455555555568888 8765 3444322   2223222222  36889999


Q ss_pred             hHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHH
Q 026308          169 CSVTALIAAFVAVD------PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       169 D~lag~iaa~la~~------~~~~~~A~~~A~~~~~~a~~  202 (240)
                      |+|.|.+...+..+      ..++.+++++|+++.+++..
T Consensus       488 DAF~AGfL~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt  527 (581)
T PLN02967        488 DGIVAGLMRMLTVQPHLITDKGYLEKTIKYAIDCGVIDQW  527 (581)
T ss_pred             HHHHHHHHHHHHhccCcccccccHHHHHHHHHHHHHHHhc
Confidence            99977776666642      14578899999887766544

>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases

Probab=99.33  E-value=7.1e-11  Score=99.31  Aligned_cols=141  Identities=14%  Similarity=0.072  Sum_probs=96.7

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      .++.+|++++++..+       ..++++.+++.+ ++++|+...    .+.....++++ .+++++||..|+..+++   
T Consensus       118 ~~~~~~~~~~~~~~~-------~~~~~~~a~~~~-~~~~d~~~~----~~~~~~~~~~~-~~d~~~~n~~e~~~l~~---  181 (265)
T cd01947         118 ILDEGDGVFITAAAV-------DKEAIRKCRETK-LVILQVTPR----VRVDELNQALI-PLDILIGSRLDPGELVV---  181 (265)
T ss_pred             HhccCCEEEEecccc-------cHHHHHHHHHhC-CeEeccCcc----ccchhHHHHhh-hCCEEEeCHHHHHHhhh---
Confidence            467889999864321       134456666664 678888652    11122345553 78999999999988753   


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                                        ++.+.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|.|.+...+.++ .
T Consensus       182 ------------------~~~~~~~~~~~viit~G~~Ga~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g-~  242 (265)
T cd01947         182 ------------------AEKIAGPFPRYLIVTEGELGAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKG-W  242 (265)
T ss_pred             ------------------HHHHHhccCCEEEEEeCCCCeEEEECCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcC-C
Confidence                              123444455668888 8765 445666677777555566788999999988888778885 8


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 026308          185 HAFEATASALSVYGIAGE  202 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a~~  202 (240)
                      ++.+|+++|+..+..+.+
T Consensus       243 ~~~~al~~a~~~Aa~~v~  260 (265)
T cd01947         243 SIEEALELGAQCGAICVS  260 (265)
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999887665443

Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.

>PLN02630 pfkB-type carbohydrate kinase family protein

Probab=99.26  E-value=3.9e-10  Score=98.16  Aligned_cols=145  Identities=14%  Similarity=0.071  Sum_probs=96.3

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHh-----cCCCEEEcccccCCc--ccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQ-----LGKPWVLDPVAAGAS--GFRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~-----~~~~vvlDp~~~~~~--~~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +..++.+.++..++    .+....+++.++.     .+..+++||......  ........+++ ...++++||+.|+..
T Consensus       120 ~~~~~~~~l~~ei~----~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~~~~~~~L-~~iDil~~ne~Ea~~  194 (335)
T PLN02630        120 YEFGMAVGVAGEIL----PETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDML-PRIGFLKASSEEALF  194 (335)
T ss_pred             hcccceeeecCCCc----HHHHHHHHHHhhhheeccCceEEecCCcccccccchhhHHHHHHHH-HhCCEEEecHHHHhh
Confidence            55666676653333    2456777777777     688899999862100  00011123455 379999999999987


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      +   ..            ++.       .+ . ..|++| |..+ +++++++.+.++..+....+++|+||+|.|.+...
T Consensus       195 l---~~------------~~~-------~~-~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~  250 (335)
T PLN02630        195 I---DV------------EEV-------RQ-K-CCVIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAG  250 (335)
T ss_pred             c---CH------------HHH-------cc-C-CEEEEEECCCceEEEECCeeEEeCCCCCCCCCCCChHHHHHHHHHHH
Confidence            6   11            111       11 1 257777 8866 44566677777765666678899999998888877


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          179 VAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       179 la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +..+ .++.+++++|+.++..+.+
T Consensus       251 l~~g-~~~~~a~~~A~a~aa~~v~  273 (335)
T PLN02630        251 LVQG-LAVPDAALLGNYFGSLAVE  273 (335)
T ss_pred             HHcC-CCHHHHHHHHHHHHHHHhC
Confidence            8875 7999999999887665443

>PLN02543 pfkB-type carbohydrate kinase family protein

Probab=99.24  E-value=4.1e-10  Score=102.30  Aligned_cols=175  Identities=17%  Similarity=0.038  Sum_probs=101.2

Q ss_pred             hhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccc---cCCccc-chHHHHHHhccCCeEEcCCHHHHHH
Q 026308           26 DFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVA---AGASGF-RLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~---~~~~~~-~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.++.++++.++.-.+ ++...+.+..+++.+++.|++|++||..   .+.... ......+++ ..+|+|+||..|++.
T Consensus       262 ~~l~~a~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l-~~aDIl~~SeeEa~~  340 (496)
T PLN02543        262 AVLKEARMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAW-NEADIIEVSRQELEF  340 (496)
T ss_pred             hHhCCCceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHH-HhCCEEEecHHHHHH
Confidence            3567889888863323 3333466778889999999999999973   111110 011234455 379999999999999


Q ss_pred             HHcCCCCCCcCCCCCCC---------------hHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCc--EEEEEe---cCC
Q 026308          101 LSRASVGPTKGVDSSHE---------------SMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGR--RVVGAH---NGV  158 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~---------------~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~--~~~~~~---~~~  158 (240)
                      |+|......+.......               ..+. +.+..+.+.+...||+| |..+. ++.++  +.....   ..+
T Consensus       341 Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~  419 (496)
T PLN02543        341 LLDEDYYERKRNYPPQYYAESFEQTKNWRDYYHYTP-EEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLIT  419 (496)
T ss_pred             HhCCCcccccccccchhhhhhhhhhhcccccccCCH-HHHHHHHHCCCCEEEEEcCCCcEEEEECCCcccccccccccCC
Confidence            99864200000000000               0011 22345555555568888 87654 33321  211000   001


Q ss_pred             ccCCCccchhhHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHH
Q 026308          159 PMMQKITATGCSVTALIAAFVAV------DPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       159 ~~~~~~~GaGD~lag~iaa~la~------~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ....+++||||+|.|.+...|..      .+.++.+++++|+++.+.+..
T Consensus       420 ~~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt  469 (496)
T PLN02543        420 PFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQW  469 (496)
T ss_pred             CCCcCCCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHc
Confidence            11357899999997766666653      125788999999887665543

>PRK09813 fructoselysine 6-kinase; Provisional

Probab=99.24  E-value=6.9e-10  Score=93.20  Aligned_cols=145  Identities=13%  Similarity=-0.002  Sum_probs=97.0

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.++.+|+++++. ..      ....+++.+++.++++++||....    ......+++ ...+++.+|..+        
T Consensus       109 ~~l~~~~~v~~~~-~~------~~~~~~~~~~~~~~~v~~D~~~~~----~~~~~~~~~-~~~d~~~~~~~~--------  168 (260)
T PRK09813        109 AWLAQYDIVHAAI-WG------HAEDAFPQLHAAGKLTAFDFSDKW----DSPLWQTLV-PHLDYAFASAPQ--------  168 (260)
T ss_pred             HHHHhCCEEEEec-cc------hHHHHHHHHHHcCCeEEEEcCCCc----cHHHHHHhC-CceeEEEecCCc--------
Confidence            3466788888752 11      124566777889999999997521    111223444 366777776321        


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                                 ...++.+.++.+.+.+...|++| |..+ +++++++.++.+..+....+++|+||+|.|.+...+..+ 
T Consensus       169 -----------~~~~~~~~~~~~~~~g~~~viit~G~~Ga~~~~~~~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g-  236 (260)
T PRK09813        169 -----------EDEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAG-  236 (260)
T ss_pred             -----------chHHHHHHHHHHHHcCCCEEEEEECCCceEEEECCEEEecCCcccCCCCCCCchHHHHHHHHHHHHcC-
Confidence                       12234556667766666678888 8765 445666777777655566788999999988887777775 


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++.+++++|+..++.+.+
T Consensus       237 ~~~~~al~~a~~~aa~~~~  255 (260)
T PRK09813        237 MTLPQAMAQGTACAAKTIQ  255 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            8999999999987665543

>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose

Probab=99.21  E-value=5.9e-10  Score=95.05  Aligned_cols=149  Identities=11%  Similarity=-0.008  Sum_probs=93.6

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhcC-------CCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLG-------KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~-------~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      ++++|++++. |...    +....+++.+++.+       +++++|+..     .. ....++++ ..+++.+|..|++.
T Consensus       125 ~~~~~~~~~~-g~~~----~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~-----~~-~~~~~~l~-~~di~~~n~~~~~~  192 (290)
T cd01939         125 LTQYGWIHFE-GRNP----DETLRMMQHIEEHNNRRPEIRITISVEVEK-----PR-EELLELAA-YCDVVFVSKDWAQS  192 (290)
T ss_pred             hccCCEEEEe-ccCH----HHHHHHHHHHHHhcCcCCCcceEEEEEecc-----Cc-hhhhhHHh-hCCEEEEEhHHHHh
Confidence            4688999986 4432    23345566666655       577788753     11 12235553 78999999988776


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcC-cEEEEEecCCc-cCCCccchhhHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDG-RRVVGAHNGVP-MMQKITATGCSVTALIA  176 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~-~~~~~~~~~~~-~~~~~~GaGD~lag~ia  176 (240)
                      + +..           +.++.... +.+..++...||+| |..+. ++++ +..++++..++ ...+++||||+|.|.+.
T Consensus       193 ~-~~~-----------~~~~~~~~-~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl  259 (290)
T cd01939         193 R-GYK-----------SPEECLRG-EGPRAKKAALLVCTWGDQGAGALGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVI  259 (290)
T ss_pred             c-CcC-----------CHHHHHHh-hhhhccCCcEEEEEcccCCeEEEcCCCCEEEecCCCCCCcccCCCchHHHHHHHH
Confidence            4 532           22332221 12222234458888 88764 4554 34556664333 35688999999988777


Q ss_pred             HHHhcCCCC-HHHHHHHHHHHHHHHHH
Q 026308          177 AFVAVDPLH-AFEATASALSVYGIAGE  202 (240)
Q Consensus       177 a~la~~~~~-~~~A~~~A~~~~~~a~~  202 (240)
                      ..+.++ .+ +.+|+++|+.+++...+
T Consensus       260 ~~l~~g-~~~~~~a~~~a~a~aa~~i~  285 (290)
T cd01939         260 YALNKG-PDDLSEALDFGNRVASQKCT  285 (290)
T ss_pred             HHHHcC-CccHHHHHHHHHHHHHHHHh
Confidence            777775 75 99999999987665543

KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.

>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism]

Probab=99.03  E-value=3.1e-09  Score=89.70  Aligned_cols=168  Identities=15%  Similarity=0.139  Sum_probs=106.5

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      ..++++.++++. |+.-....+.+..+.+.+.+.+.+.+++-++..-+.+..+...+.+ +.+|+|..|+.|++.+....
T Consensus       155 ~lveka~v~yv~-Gffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~-~y~DiifgNe~EA~af~~~~  232 (343)
T KOG2854|consen  155 ALVEKAKVFYVA-GFFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVL-PYADIIFGNEDEAAAFARAH  232 (343)
T ss_pred             hhhhheeEEEEE-EEEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhc-CcceEEEcCHHHHHHHHHhh
Confidence            477889999996 7722222366788888899999989988877433322222223333 47899999999999997643


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHH---hcCCEEEEe-cCccEE-EcCcEEEEEec---CCccCCCccchhhHHHHHHHH
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAE---ASGAIVAVS-GAVDIV-TDGRRVVGAHN---GVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~---~~~~~Vvit-G~~~~i-~~~~~~~~~~~---~~~~~~~~~GaGD~lag~iaa  177 (240)
                      .     .+. .+..++......+-+   ..+..+++| |....+ ..++.++..+.   +.....++.|+||+|+|.+.+
T Consensus       233 ~-----~~t-~dv~eia~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~  306 (343)
T KOG2854|consen  233 G-----WET-KDVKEIALKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLS  306 (343)
T ss_pred             C-----Ccc-cchHHHhhHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHH
Confidence            1     111 222222222222222   224458888 776544 44455544332   224566889999999888888


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+.++ .++.+.++.+.+..+.+++
T Consensus       307 ~l~qg-~~l~~cir~g~~aa~~vi~  330 (343)
T KOG2854|consen  307 QLVQG-KSLEECIRAGSYAASHVIR  330 (343)
T ss_pred             HHHcC-CCHHHHHHHHHHHhhheee
Confidence            88886 7999999888876555443

>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism]

Probab=98.96  E-value=4.9e-09  Score=89.28  Aligned_cols=170  Identities=16%  Similarity=0.006  Sum_probs=94.0

Q ss_pred             cCCCcccC-CCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCe
Q 026308           11 AGASPAML-HTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPT   89 (240)
Q Consensus        11 ~g~~~~~~-~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~   89 (240)
                      .|++.-|. ...+-..+.++.+.+++++..++.+......    ++++   ++++.+|.+.-.  +.   ....+ ...+
T Consensus       119 ~gan~~~~~~~se~~~~~i~~ak~~~~q~ei~~~~~~~s~----~~~~---~~~~~~~g~~i~--~~---pn~~l-~l~~  185 (330)
T KOG2855|consen  119 RGANADMLPEDSELNLEVIKEAKVFHCQSEILIEEPMRSL----HIAA---VKVAKNAGPAIF--YD---PNLRL-PLWD  185 (330)
T ss_pred             ecCchhcCcccccccHHHHhhccEEEEeeecCCcchhHHH----HHhh---hhhhhccccccc--CC---CCccc-cccc
Confidence            45555444 2233446788899999999887655433222    2222   344444443110  00   00111 2456


Q ss_pred             EEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHH--------HHHHHhcCCEEEEe-cCcc-EEEcCcEE-EEEecCC
Q 026308           90 VIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAA--------RCLAEASGAIVAVS-GAVD-IVTDGRRV-VGAHNGV  158 (240)
Q Consensus        90 vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a--------~~l~~~~~~~Vvit-G~~~-~i~~~~~~-~~~~~~~  158 (240)
                      ++.||+.|++.+++..-     +.. .+.++. +..        .+|.....+.||+| |..+ .+++.+.. .+++...
T Consensus       186 ~~~~ne~e~~~i~~~ad-----v~~-~s~~e~-~fl~~~~~~~~~~L~~~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~  258 (330)
T KOG2855|consen  186 SLEENESEIASIWNMAD-----VIK-VSSQEL-AFLTGIEDDKILKLWHMKLKLVIVTLGEKGCRYYTKDFKGSHVPAFK  258 (330)
T ss_pred             cccccHHHHHHHhhhhh-----ccc-ccHHHH-HHhccCccchHHHHhccCCCEEEEEeCCCceEEEecCCCCCCCCCcc
Confidence            77777777777766421     000 011110 010        24666656778888 8765 44443222 3455555


Q ss_pred             ccCCCccchhhHHHHHHHHHHhcCC-CC---HHHHHHHHHHHHHHH
Q 026308          159 PMMQKITATGCSVTALIAAFVAVDP-LH---AFEATASALSVYGIA  200 (240)
Q Consensus       159 ~~~~~~~GaGD~lag~iaa~la~~~-~~---~~~A~~~A~~~~~~a  200 (240)
                      ....+++||||+|.|+|+..|+.+. .+   +.+++++|..++..+
T Consensus       259 V~~VDtTGAGDsFvgal~~~L~~~~~~~~~~L~~~l~~A~a~~ai~  304 (330)
T KOG2855|consen  259 VKAVDTTGAGDSFVGALAVQLVRGSLLPELSLEEALRFANACGAIT  304 (330)
T ss_pred             cccccCCCchHHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHH
Confidence            5567889999999999999999830 23   556777777665554

>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only]

Probab=95.49  E-value=0.14  Score=45.98  Aligned_cols=151  Identities=15%  Similarity=0.142  Sum_probs=75.8

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc-CCCCC
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR-ASVGP  108 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g-~~~~~  108 (240)
                      .++.+++...+ +   ...+.++.+ ++.+..+|++.|.-.+...   ...+-++....+.|+||..|+-.... ..+  
T Consensus       425 ~a~~I~~DsNi-S---~~~Ma~il~-ak~~k~~V~fEPTd~~k~~---K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v--  494 (614)
T KOG3009|consen  425 SADFILLDSNI-S---VPVMARILE-AKKHKKQVWFEPTDIDKVK---KVFKTLLVGAITAISPNANELLKAAKLCHV--  494 (614)
T ss_pred             cCCEEEEcCCC-C---HHHHHHHHH-hhhccCceEecCCCchhhh---hhhhhcceeeEEeeCCCHHHHHHHhhcCce--
Confidence            78888887443 3   245567776 8888999999997533111   11112222357999999999843321 111  


Q ss_pred             CcCCCC--CCChHHHHHHHHHHHHh--cCC-EEEEe-cCcc-EE-E-cCcEEEEEec--CCcc---CCCccchhhHHHHH
Q 026308          109 TKGVDS--SHESMDAMEAARCLAEA--SGA-IVAVS-GAVD-IV-T-DGRRVVGAHN--GVPM---MQKITATGCSVTAL  174 (240)
Q Consensus       109 ~~~~~~--~~~~~~~~~~a~~l~~~--~~~-~Vvit-G~~~-~i-~-~~~~~~~~~~--~~~~---~~~~~GaGD~lag~  174 (240)
                        .+++  ....+...+.++++.++  .+. ..+.| ...+ ++ | ++.+...+..  +...   ..+..|+||+|.+.
T Consensus       495 --~~nps~~q~~~~~~~~~~~~~~k~~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g  572 (614)
T KOG3009|consen  495 --SVNPSVIQTADGVLELIEKEKTKLLLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSG  572 (614)
T ss_pred             --eeChhhhccchHHHHHHHHHHHHhhcccceEEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccc
Confidence              0010  01223444444444333  222 24444 2222 22 2 2222222111  2222   23467999999554


Q ss_pred             HHHHHhcCCCCHHHHHHHH
Q 026308          175 IAAFVAVDPLHAFEATASA  193 (240)
Q Consensus       175 iaa~la~~~~~~~~A~~~A  193 (240)
                      +-+.++.+ .+..++..-+
T Consensus       573 ~i~~l~~~-~~v~es~~gg  590 (614)
T KOG3009|consen  573 VIAGLAHN-KTVVESLQGG  590 (614)
T ss_pred             eeehhhcC-cchHhhcccc
Confidence            44446664 5666665544

>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism]

Probab=95.11  E-value=0.07  Score=44.02  Aligned_cols=49  Identities=14%  Similarity=0.064  Sum_probs=34.9

Q ss_pred             cEEEEEecCC-ccCCCccchhhHHH-HHHHHHHhcCCCCHHHHHHHHHHHHH
Q 026308          149 RRVVGAHNGV-PMMQKITATGCSVT-ALIAAFVAVDPLHAFEATASALSVYG  198 (240)
Q Consensus       149 ~~~~~~~~~~-~~~~~~~GaGD~la-g~iaa~la~~~~~~~~A~~~A~~~~~  198 (240)
                      +..+.++..+ +.+.++.|+||+|+ |.|=+.+.++ .++.||+.+|+..++
T Consensus       240 g~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~-r~l~eAvdfg~rvas  290 (308)
T KOG2947|consen  240 GKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQG-RSLAEAVDFGNRVAS  290 (308)
T ss_pred             CCEEecCCCCCccceeeccCCCcchHHHHHHHHHhh-hhHHHHHHHHHHhhh
Confidence            4456665433 55678899999994 4555667775 789999999887543

>PRK03979 ADP-specific phosphofructokinase; Provisional

Probab=89.18  E-value=10  Score=34.68  Aligned_cols=102  Identities=12%  Similarity=0.100  Sum_probs=54.7

Q ss_pred             ccCcEEEecCC--CCC-----C----hHHHHHHHHHHHHh--cCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHH
Q 026308           30 HVRALYVNVGT--LSA-----N----WLPSMKAAAQLASQ--LGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNAS   96 (240)
Q Consensus        30 ~~d~vvi~~G~--~~~-----~----~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~   96 (240)
                      +.|.++++ |+  +.+     .    ..+-....++..++  .++++-+--.......++......++ +..|.+=-|+.
T Consensus       222 ~~D~avlS-G~q~i~~~y~dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As~~~~~ir~~i~~~il-p~vDSlGmNE~  299 (463)
T PRK03979        222 MVDGAILS-GYQGIKEEYSDGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFASIQNREIRKKIITYIL-PHVDSVGMDET  299 (463)
T ss_pred             CCCEEEEe-chhhhhccccccccHHHHHHHHHHHHHHHhhCCCCceEEEEeccccCHHHHHHHHHhhc-cccccccCCHH
Confidence            48999995 66  333     1    12223334444433  35677664333221122222223333 47899999999


Q ss_pred             HHHHHHcCCCC--CCcCCCCCCChHHHHHHHHHHHHhcC
Q 026308           97 EIIALSRASVG--PTKGVDSSHESMDAMEAARCLAEASG  133 (240)
Q Consensus        97 E~~~L~g~~~~--~~~~~~~~~~~~~~~~~a~~l~~~~~  133 (240)
                      |+..++..-..  ....+-..+..+++.+++.+|.++++
T Consensus       300 ELa~l~~~lg~~~l~~~i~~~~~i~~v~~a~~~L~~~~~  338 (463)
T PRK03979        300 EIANILNVLGYEELSERILKESRIEDVIEGAKILLDELN  338 (463)
T ss_pred             HHHHHHHHhcCcchhhhhhccccHHHHHHHHHHHHHHcC
Confidence            99987642110  00111111345788888999988875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	240
3hpd_A	265	Structure Of Hydroxyethylthiazole Kinase Protein Fr		5e-37
1c3q_A	284	Crystal Structure Of Native Thiazole Kinase In The		6e-25
1esj_A	284	Crystal Structure Of Thiazole Kinase Mutant (C198s)		9e-24
1ekk_A	272	Crystal Structure Of Hydroxyethylthiazole Kinase In		1e-23
3dzv_A	273	Crystal Structure Of 4-Methyl-5-(Beta-Hydroxyethyl)		5e-14
3nl2_A	540	The Crystal Structure Of Candida Glabrata Thi6, A B		7e-13
3nm1_A	540	The Crystal Structure Of Candida Glabrata Thi6, A B		2e-11

>pdb|3HPD|A Chain A, Structure Of Hydroxyethylthiazole Kinase Protein From Pyrococcus Horikoshii Ot3 Length = 265

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 125/229 (54%), Gaps = 6/229 (2%)
Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+  AN LL+ GASP M H  EE+ +      A+ +N+GTL + W  SM  A ++A++LG
Sbjct: 27  MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELG 86
Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDS-SHESM 119
           KP VLDPV AGA+ FR    LE++     V++GN  EI AL     G T+GVDS  +   
Sbjct: 87  KPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALL-GEEGKTRGVDSLEYGEE 145
Query: 120 DAMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           +A +     A                +DGRR    +NG  ++ ++T TGC V AL  AFV
Sbjct: 146 EAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFV 205
Query: 180 AV-DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227
           AV +PL   +AT SAL  +GIA E     AK P S  + + D L+ +++
Sbjct: 206 AVTEPL---KATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINE 251

>pdb|1C3Q|A Chain A, Crystal Structure Of Native Thiazole Kinase In The Monoclinic Form Length = 284

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 117/224 (52%), Gaps = 4/224 (1%)
Query: 2   DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
           +  AN LL+ GASP M +  EE+ D      AL +N+GTLS   + +M  A + A++ G 
Sbjct: 42  NFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGV 101
Query: 62  PWVLDPVAAGASGFRLNACLELV-QLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           P +LDPV AGA+ FR  +  +++ +++   IRGNA+EI      +    KGVD+     D
Sbjct: 102 PVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGD 161
Query: 121 AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
            +  A+  A+                D   V   HNG  ++ K+T  GC +T+++ AF A
Sbjct: 162 IIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFCA 221
Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCL 222
           V+    F A A A+S YG+A ++       KGP S ++ +++ L
Sbjct: 222 VEENPLFAAIA-AISSYGVAAQLAAQQTADKGPGSFQIELLNKL 264

>pdb|1ESJ|A Chain A, Crystal Structure Of Thiazole Kinase Mutant (C198s) Length = 284

Iteration: 1
 Score =  106 bits (265), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 2   DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
           +  AN LL+ GASP M +  EE+ D      AL +N+GTLS   + +M  A + A++ G 
Sbjct: 42  NFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGV 101
Query: 62  PWVLDPVAAGASGFRLNACLELV-QLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           P +LDPV AGA+ FR  +  +++ +++   IRGNA+EI      +    KGVD+     D
Sbjct: 102 PVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGD 161
Query: 121 AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
            +  A+  A+                D   V   HNG  ++ K+T  G  +T+++ AF A
Sbjct: 162 IIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGSLLTSVVGAFCA 221
Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCL 222
           V+    F A A A+S YG+A ++       KGP S ++ +++ L
Sbjct: 222 VEENPLFAAIA-AISSYGVAAQLAAQQTADKGPGSFQIELLNKL 264

>pdb|1EKK|A Chain A, Crystal Structure Of Hydroxyethylthiazole Kinase In The R3 Form With Hydroxyethylthiazole Length = 272

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 2   DLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGK 61
           +  AN LL+ GASP M +  EE+ D      AL +N+GTLS   + +M  A + A++ G 
Sbjct: 30  NFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGV 89
Query: 62  PWVLDPVAAGASGFRLNACLELV-QLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           P +LDPV AGA+ FR  +  +++ +++   IRGNA+EI      +    KGVD+     D
Sbjct: 90  PVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGD 149
Query: 121 AMEAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
            +  A+  A+                D   V   HNG  ++ K+T  G  +T+++ AF A
Sbjct: 150 IIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGXLLTSVVGAFCA 209
Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCL 222
           V+    F A A A+S YG+A ++       KGP S ++ +++ L
Sbjct: 210 VEENPLFAAIA-AISSYGVAAQLAAQQTADKGPGSFQIELLNKL 252

>pdb|3DZV|A Chain A, Crystal Structure Of 4-Methyl-5-(Beta-Hydroxyethyl)thiazole Kinase (Np_816404.1) From Enterococcus Faecalis V583 At 2.57 A Resolution Length = 273

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 5   ANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWV 64
           AN LL   A P       E P       AL +N+G LS     S+ AA+  A Q+ K  V
Sbjct: 33  ANALLYIDAKPIXADDPREFPQXFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTV 92
Query: 65  LDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSS--HESMDAM 122
           +D V  GAS  R     +LV  +PTV++GN SE     +  V   +GVD S   +S +A+
Sbjct: 93  VDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEXRTFCQL-VSHGRGVDGSPLDQSEEAI 151
Query: 123 EA-ARCLAEXXXXXXXXXXXXXXXTD----GRRVVGAHNGVPMMQKITATGCSVTALIAA 177
           E   + L +                D      +V+   NGVP +   T TG  V AL+AA
Sbjct: 152 EELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIVLQNGVPELDCFTGTGDLVGALVAA 211
Query: 178 FVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCL 222
            +  +      A  +A+S + + GE   + ++G A  R + ++ L
Sbjct: 212 LLG-EGNAPXTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQL 255

>pdb|3NL2|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of Eukaryotes Length = 540

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 5   ANTLLSAGASPAMLHTIEEIPDF--TPHVRALYVNVGTLSANWLPSM-KAAAQLASQLGK 61
           AN  L+ G+SP M     E+ D    PH   L +N G+++    P M KAA +  + + +
Sbjct: 280 ANVTLALGSSPIMSEIQSEVNDLAAIPHA-TLLLNTGSVAP---PEMLKAAIRAYNDVKR 335
Query: 62  PWVLDPVAAGASGFRL---NACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHES 118
           P V DPV   A+  RL   N  L   Q   + I+GN+SEI+ L+  +    KGVD+S   
Sbjct: 336 PIVFDPVGYSATETRLLLNNKLLTFGQF--SCIKGNSSEILGLAELNKERMKGVDASSGI 393
Query: 119 MDAM--EAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAH------NG------------- 157
            + +  +A + +A                 DG  + G +      NG             
Sbjct: 394 SNELLIQATKIVAFKYKTVAVCTGEFDFIADG-TIEGKYSLSKGTNGTSVEDIPCVAVEA 452
Query: 158 --VPMMQKITATGCSVTALIAAFVAVDPLHA--FEATASALSVYGIAGEMGMSMAKGPAS 213
             + +M  ITA+GCS+ + IA  +   P     F A  + + +Y  AG++      G  S
Sbjct: 453 GPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGS 512
Query: 214 LRMHMIDCLHGL 225
            ++ +ID L+ L
Sbjct: 513 FQVELIDALYRL 524

>pdb|3NM1|A Chain A, The Crystal Structure Of Candida Glabrata Thi6, A Bifunctional Enzyme Involved In Thiamin Biosyhthesis Of Eukaryotes Length = 540

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 34/250 (13%)
Query: 5   ANTLLSAGASPAMLHTIEEIPDF--TPHVRALYVNVGTLSANWLPSM-KAAAQLASQLGK 61
           AN  L+ G+SP M     E+ D    PH   L +N G+++    P M KAA +  + + +
Sbjct: 280 ANVTLALGSSPIMSEIQSEVNDLAAIPHA-TLLLNTGSVAP---PEMLKAAIRAYNDVKR 335
Query: 62  PWVLDPVAAGASGFRLNACLELVQL-KPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           P V DPV   A+  RL     L+   + + I+GN+SEI+ L+  +    KGVD+S    +
Sbjct: 336 PIVFDPVGYSATETRLLLNNLLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISN 395
Query: 121 AM--EAARCLAEXXXXXXXXXXXXXXXTDGRRVVGAH------NG--------------- 157
            +  +A + +A                 DG  + G +      NG               
Sbjct: 396 ELLIQATKIVAFKYKTVAVCTGEFDFIADG-TIEGKYSLSKGTNGTSVEDIPCVAVEAGP 454
Query: 158 VPMMQKITATGCSVTALIAAFVAVDPLHA--FEATASALSVYGIAGEMGMSMAKGPASLR 215
           + +M  ITA+GCS+ + IA  +   P     F A  + + +Y  AG++      G  S +
Sbjct: 455 IEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSFQ 514
Query: 216 MHMIDCLHGL 225
           + +ID L+ L
Sbjct: 515 VELIDALYRL 524

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	240
3nl6_A	540	Thiamine biosynthetic bifunctional enzyme; thiamin	2e-80
1v8a_A	265	Hydroxyethylthiazole kinase; alpha-beta, ATP bindi	4e-76
1ekq_A	272	Hydroxyethylthiazole kinase; alpha-beta, transfera	1e-74
3dzv_A	273	4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_	2e-70

>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Length = 540

 Score =  249 bits (638), Expect = 2e-80
 Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 28/259 (10%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRA-LYVNVGTLSANWLPSMKAAAQLASQL 59
            +  AN  L+ G+SP M     E+ D      A L +N G+++      +KAA +  + +
Sbjct: 276 QNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAPPE--MLKAAIRAYNDV 333

Query: 60  GKPWVLDPVAAGASGFRLNACLELV-QLKPTVIRGNASEIIALSRASVGPTKGVDSSHE- 117
            +P V DPV   A+  RL    +L+   + + I+GN+SEI+ L+  +    KGVD+S   
Sbjct: 334 KRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGI 393

Query: 118 -SMDAMEAARCLAEASGAIVAVSGAVDIVTDG--------------------RRVVGAHN 156
            +   ++A + +A     +   +G  D + DG                      V     
Sbjct: 394 SNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAG 453

Query: 157 GVPMMQKITATGCSVTALIAAFVAVDPLH--AFEATASALSVYGIAGEMGMSMAKGPASL 214
            + +M  ITA+GCS+ + IA  +   P     F A  + + +Y  AG++      G  S 
Sbjct: 454 PIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGSF 513

Query: 215 RMHMIDCLHGLDQAALLSR 233
           ++ +ID L+ L +      
Sbjct: 514 QVELIDALYRLTRENTPVT 532

>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} SCOP: c.72.1.2 PDB: 3hpd_A Length = 265

 Score =  230 bits (587), Expect = 4e-76
 Identities = 95/241 (39%), Positives = 134/241 (55%), Gaps = 4/241 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+  AN LL+ GASP M H  EE+ +      A+ +N+GTL + W  SM  A ++A++LG
Sbjct: 27  MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELG 86

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESM- 119
           KP VLDPV AGA+ FR    LE++     V++GN  EI AL     G T+GVDS      
Sbjct: 87  KPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEE-GKTRGVDSLEYGEE 145

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           +A +     A      VAV+GAVD V+DGRR    +NG  ++ ++T TGC V AL  AFV
Sbjct: 146 EAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFV 205

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL 239
           AV      +AT SAL  +GIA E     AK P S  + + D L+ +++  + +   +  +
Sbjct: 206 AVTE--PLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKVREV 263

Query: 240 S 240
            
Sbjct: 264 E 264

>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* Length = 272

 Score =  226 bits (578), Expect = 1e-74
 Identities = 77/243 (31%), Positives = 132/243 (54%), Gaps = 4/243 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
            +  AN LL+ GASP M +  EE+ D      AL +N+GTLS   + +M  A + A++ G
Sbjct: 29  TNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHG 88

Query: 61  KPWVLDPVAAGASGFRLNACLE-LVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
            P +LDPV AGA+ FR  +  + + +++   IRGNA+EI      +    KGVD+     
Sbjct: 89  VPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGG 148

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           D +  A+  A+    ++A++G VD++ D   V   HNG  ++ K+T  GC +T+++ AF 
Sbjct: 149 DIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFC 208

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCLHGLDQAALLSRTNIT 237
           AV+  +   A  +A+S YG+A ++       KGP S ++ +++ L  + +  +     I 
Sbjct: 209 AVEE-NPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATIE 267

Query: 238 ALS 240
            ++
Sbjct: 268 RVT 270

>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} Length = 273

 Score =  215 bits (549), Expect = 2e-70
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 9/234 (3%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
            + +AN LL   A P M     E P       AL +N+G LS     S+ AA+  A Q+ 
Sbjct: 29  CESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVN 88

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           K  V+D V  GAS  R     +LV  +PTV++GN SE+    +      +GVD S     
Sbjct: 89  KLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRTFCQLV-SHGRGVDGSPLDQS 147

Query: 121 -------AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTA 173
                       +   +    +   +G  D++    +V+   NGVP +   T TG  V A
Sbjct: 148 EEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIVLQNGVPELDCFTGTGDLVGA 207

Query: 174 LIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ 227
           L+AA +         A  +A+S + + GE   + ++G A  R + ++ L  L +
Sbjct: 208 LVAALLGEGN-APMTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQLSLLMK 260

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	240
3hpd_A	265	Hydroxyethylthiazole kinase; alpha-beta, ATP bindi	100.0
3dzv_A	273	4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_	100.0
1v8a_A	265	Hydroxyethylthiazole kinase; alpha-beta, ATP bindi	100.0
1ekq_A	272	Hydroxyethylthiazole kinase; alpha-beta, transfera	100.0
3nl6_A	540	Thiamine biosynthetic bifunctional enzyme; thiamin	100.0
3rpz_A	279	ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str	99.95
3rss_A	502	Putative uncharacterized protein; unknown function	99.94
3bgk_A	311	SMU.573, putative uncharacterized protein; alpha/b	99.94
2r3b_A	310	YJEF-related protein; putative kinase in the ribok	99.94
3k5w_A	475	Carbohydrate kinase; 11206B,helicobacter pylori,PS	99.91
3mbh_A	291	Putative phosphomethylpyrimidine kinase; structura	99.89
2i5b_A	271	Phosphomethylpyrimidine kinase; ADP complex, PDXK,	99.88
3pzs_A	289	PM kinase, pyridoxamine kinase; structural genomic	99.88
3h74_A	282	Pyridoxal kinase; PSI-II, structural genomics, pro	99.86
1ub0_A	258	THID, phosphomethylpyrimidine kinase; thiamin bios	99.86
3rm5_A	550	Hydroxymethylpyrimidine/phosphomethylpyrimidine K	99.86
3zs7_A	300	Pyridoxal kinase; transferase, sleeping sickness;	99.86
1jxh_A	288	Phosphomethylpyrimidine kinase; THID, ribokinase f	99.85
2ddm_A	283	Pyridoxine kinase; pyridoxal kinase, ribokinase, p	99.83
3umo_A	309	6-phosphofructokinase isozyme 2; glycolysis, trans	99.82
2f02_A	323	Tagatose-6-phosphate kinase; LACC, structural geno	99.82
2jg5_A	306	Fructose 1-phosphate kinase; 1-phosphofructokinase	99.82
2jg1_A	330	Tagatose-6-phosphate kinase; phosphoryl transfer,	99.81
1rkd_A	309	Ribokinase; carbohydrate kinase, ribose, nucleotid	99.81
2abq_A	306	Fructose 1-phosphate kinase; dimer, structural gen	99.81
3ry7_A	304	Ribokinase; transferase; 2.15A {Staphylococcus aur	99.81
3cqd_A	309	6-phosphofructokinase isozyme 2; phosphofructokina	99.8
3ie7_A	320	LIN2199 protein; phosphofructokinases, transferase	99.79
2yxt_A	312	Pyridoxal kinase; beta sheet with alpha helix, met	99.78
2fv7_A	331	Ribokinase; structural genomics, structural genomi	99.78
3kzh_A	328	Probable sugar kinase; NYSGXRC, PSI-II, protein st	99.78
2qhp_A	296	Fructokinase; NP_810670.1, PFKB family carbohydrat	99.77
4e69_A	328	2-dehydro-3-deoxygluconokinase; putative sugar kin	99.77
4e84_A	352	D-beta-D-heptose 7-phosphate kinase; LPS-heptose b	99.77
3vas_A	370	Putative adenosine kinase; ribokinase, enzyme, tra	99.77
2afb_A	351	2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-	99.77
3ktn_A	346	Carbohydrate kinase, PFKB family; PFKB family,ribo	99.77
4du5_A	336	PFKB; structural genomics, PSI-biology, NEW YORK s	99.76
2ajr_A	331	Sugar kinase, PFKB family; TM0828, possible 1-phos	99.76
1bx4_A	345	Protein (adenosine kinase); human adenosine kinase	99.76
3otx_A	347	Adenosine kinase, putative; AP5A, transferase-tran	99.75
3lhx_A	319	Ketodeoxygluconokinase; structural genomics, PSI-2	99.75
3loo_A	365	Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad	99.75
2abs_A	383	Adenosine kinase, AK; ribokinase fold, alpha/beta,	99.74
3iq0_A	330	Putative ribokinase II; transferase,kinase,SAD,rib	99.74
2rbc_A	343	Sugar kinase, AGR_C_4560P; ribokinase family, ATP-	99.74
1vm7_A	311	Ribokinase; TM0960, structural genomics, JCSG, pro	99.73
4e3a_A	352	Sugar kinase protein; structural genomics, protein	99.72
2qcv_A	332	Putative 5-dehydro-2-deoxygluconokinase; structura	99.72
2nwh_A	317	AGR_C_3442P, carbohydrate kinase; structural genom	99.72
3kd6_A	313	Carbohydrate kinase, PFKB family; nucleoside kinas	99.7
3h49_A	325	Ribokinase; transferase,PFKB family,sugar kinase Y	99.69
3ljs_A	338	Fructokinase; fructokianse, PSI2, NYSGXRC, structu	99.69
3pl2_A	319	Sugar kinase, ribokinase family; PFKB PFAM motif,	99.68
1tyy_A	339	Putative sugar kinase; ribokinase fold, alpha/beta	99.66
3hj6_A	327	Fructokinase, FRK; fructose, transferase, carbohyd	99.66
1v1a_A	309	2-keto-3-deoxygluconate kinase; ATP, structural ge	99.66
2c4e_A	302	Sugar kinase MJ0406; transferase, nucleoside kinas	99.65
3uq6_A	372	Adenosine kinase, putative; ribokinase, transferas	99.64
2pkf_A	334	Adenosine kinase; transferase, S genomics, TB stru	99.63
3b1n_A	326	Ribokinase, putative; rossmann fold, ATP binding,	99.62
3go6_A	310	Ribokinase RBSK; phosphofructokinase, carbohydrate	99.61
3ikh_A	299	Carbohydrate kinase; transferase,kinase,SAD,ribose	99.6
1vk4_A	298	PFKB carbohydrate kinase TM0415; structural genomi	99.6
2v78_A	313	Fructokinase; transferase, PFKB family carbohydrat	99.57
2dcn_A	311	Hypothetical fructokinase; 2-keto-3-deoxygluconate	99.56
4gm6_A	351	PFKB family carbohydrate kinase; enzyme function i	99.53
2hlz_A	312	Ketohexokinase; non-protein kinase, creatine kinas	99.53
3ewm_A	313	Uncharacterized sugar kinase PH1459; carbohydrate	99.53
3bf5_A	306	Ribokinase related protein; 10640157, putative rib	99.44
3drw_A	474	ADP-specific phosphofructokinase; AMP, GLYC kinase	92.55

>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}

Probab=100.00  E-value=9.7e-48  Score=319.47  Aligned_cols=237  Identities=40%  Similarity=0.587  Sum_probs=214.0

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      +||+||++|++|++|+|+++++|+.++.+.+++++|++|++++.+.+.+....+.+++.++|+||||++.+.+.+|.+..
T Consensus        27 ~n~~AN~lLA~GasPiMa~~~~E~~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~  106 (265)
T 3hpd_A           27 MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVS  106 (265)
T ss_dssp             HHHHHHHHHHHTCEEEECCCTTTHHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHH
T ss_pred             HHHHHHHHHHhCCchhhcCCHHHHHHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHH
Confidence            48999999999999999999999999999999999999999988888888899999999999999999999999988877


Q ss_pred             HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCC-CChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSS-HESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      ++++..++++||||.+|+..|.|... ..+|+|+. .+.++..+++++++++++++|++||..|++.++++++.++++.+
T Consensus       107 ~~ll~~~~~vIrgN~sEi~~L~g~~~-~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~d~I~dg~~~~~~~~G~~  185 (265)
T 3hpd_A          107 LEILSRGVDVLKGNFGEISALLGEEG-KTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHE  185 (265)
T ss_dssp             HHHHHHCCSEEEEEHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCG
T ss_pred             HHHHhcCCcEEcCCHHHHHHHhcccC-CCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCCeEEEcCCEEEEECCCCh
Confidence            88887789999999999999999764 45666642 34578889999999999999999999999999999999999999


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhcccccccc
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL  239 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~  239 (240)
                      .+.+++|+||+|+|++++|++++  ++++|+..|+.+++.|++.+.++..|+|+|..+++|.|+.+..+++.+++|++++
T Consensus       186 ~m~~vtGtGc~Lsg~iaa~lA~~--~~~~Aa~~a~~~~g~Age~Aa~~~~GpGsf~~~llD~L~~l~~~~~~~~~~i~~v  263 (265)
T 3hpd_A          186 LLGRVTGTGCMVAALTGAFVAVT--EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKVREV  263 (265)
T ss_dssp             GGGGSTTHHHHHHHHHHHHHTTS--CHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_pred             HhhcCCccchHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHcCCHHHHHhhCCeEEe
Confidence            99988999999999999999985  7899999999999999999998878999999999999999999999999999997


Q ss_pred             C
Q 026308          240 S  240 (240)
Q Consensus       240 ~  240 (240)
                      +
T Consensus       264 ~  264 (265)
T 3hpd_A          264 E  264 (265)
T ss_dssp             C
T ss_pred             e
Confidence            5

>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}

Probab=100.00  E-value=6.7e-45  Score=304.63  Aligned_cols=227  Identities=30%  Similarity=0.402  Sum_probs=197.2

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      +||+||++|++|+||+|+++++|+.++++.+|+++|++|++++.+.+.+..+++.+++.++|+||||++.+.+.+|.+..
T Consensus        29 ~n~~AN~~La~GasP~M~~~~~e~~e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~  108 (273)
T 3dzv_A           29 CESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVG  108 (273)
T ss_dssp             HHHHHHHHHHTTCEEECCCCGGGHHHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHH
T ss_pred             hhhHHHHHHHcCCchhhcCCHHHHHHHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHH
Confidence            48999999999999999999999999999999999999998877778888888889999999999999998888877666


Q ss_pred             HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCC---CChH---HHHHHHHHHHHhcC-CEEEEecCccEEEcCcEEEE
Q 026308           81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSS---HESM---DAMEAARCLAEASG-AIVAVSGAVDIVTDGRRVVG  153 (240)
Q Consensus        81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~---~~~~---~~~~~a~~l~~~~~-~~VvitG~~~~i~~~~~~~~  153 (240)
                      ++++..++++||||..|+++|+|... ..+|+|..   ...+   ++.+++++|+++++ ++|++||..|+++++++++.
T Consensus       109 ~~Ll~~~~~VItpN~~E~~~L~g~~~-~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~D~i~dg~~~~~  187 (273)
T 3dzv_A          109 EKLVHNQPTVVKGNLSEMRTFCQLVS-HGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIV  187 (273)
T ss_dssp             HHHHHTCCSEEEEEHHHHHHHTTCCC-C-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSSEEEECSSCEEE
T ss_pred             HHHHhcCCcEECCCHHHHHHHhCCcc-cccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCeeEEEcCCEEEE
Confidence            66665579999999999999999765 34555531   1124   67789999999998 99999999999999888888


Q ss_pred             EecCCccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHH
Q 026308          154 AHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAA  229 (240)
Q Consensus       154 ~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~  229 (240)
                      ++.+++.+.+++|+||+|+|+|+++++++ .++.+|+..|+.+++.|++.++++..|+|+|..+++|+|+.+..++
T Consensus       188 ~~~G~~~~~~v~GtGc~Ls~~Iaa~lA~g-~~~~~Aa~~A~~~~~~Age~A~~~~~g~Gsf~~~llD~L~~l~~~~  262 (273)
T 3dzv_A          188 LQNGVPELDCFTGTGDLVGALVAALLGEG-NAPMTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQLSLLMKEK  262 (273)
T ss_dssp             ECCCCGGGGSSTTHHHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHGGGST
T ss_pred             eCCCCcccCCcCCchHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHcCCchH
Confidence            88888888888999999999999999996 8999999999999999999998876789999999999999987653

>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A

Probab=100.00  E-value=4.2e-45  Score=306.48  Aligned_cols=236  Identities=40%  Similarity=0.586  Sum_probs=202.0

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      +||+||++|++|++|+|.++++++.++++++|++++|+|++++++.+.+..+++.+++.++|+||||++.+.++++.+..
T Consensus        27 ~~~~an~~la~gasp~M~~~~~e~~~~~~~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~  106 (265)
T 1v8a_A           27 MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVS  106 (265)
T ss_dssp             HHHHHHHHHHHTCEEEECCCTTTHHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHH
T ss_pred             ecchHHHHHhcCCCccccCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHH
Confidence            47999999999999999999999999999999999999998766667777888888899999999999988777765555


Q ss_pred             HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCC-ChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSH-ESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      .++++..+++||||..|+++|+|.+. ..+|++... ..+++.+++++|+++++++||+||..++++++++.+.++.+++
T Consensus       107 ~~ll~~~~~vITPN~~E~~~L~g~~~-~~~gvd~~~~~~~~~~~aa~~la~~~~~~VvlkG~~d~i~~~~~~~~~~~g~~  185 (265)
T 1v8a_A          107 LEILSRGVDVLKGNFGEISALLGEEG-KTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHE  185 (265)
T ss_dssp             HHHHHHCCSEEEEEHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCG
T ss_pred             HHHHHhCCcEEcCCHHHHHHHhCCcc-cccCcCcccccHHHHHHHHHHHHHHhCcEEEEcCCCcEEEcCCEEEEEcCCCc
Confidence            56665349999999999999999754 234444211 2367888999999999999999999999998888888887777


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhcccccccc
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL  239 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~  239 (240)
                      .+.+++|+||+|+|+++++++++ .+ .+|+..|+.+|+.|++.++++..|+|++..+++|.|+.+..++|.++++++++
T Consensus       186 ~~~~~~GtGD~Lsg~iaa~lA~g-~~-~~Aa~~a~~~~~~Ag~~a~~~~~g~g~~~~~l~d~l~~l~~~~~~~~~~~~~~  263 (265)
T 1v8a_A          186 LLGRVTGTGCMVAALTGAFVAVT-EP-LKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKVREV  263 (265)
T ss_dssp             GGGGSTTHHHHHHHHHHHHHTTS-CH-HHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_pred             CcCCccChhHHHHHHHHHHHhcC-CC-HHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhcCHHHHHhccceEee
Confidence            88778999999999999999996 78 99999999999999999988766899999999999999999999999998865

>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*

Probab=100.00  E-value=8.8e-41  Score=281.51  Aligned_cols=237  Identities=32%  Similarity=0.540  Sum_probs=196.1

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      +|++||+++++|++|+|+++++++.++++.+|++++++|++++.+.+.+..+++.+++.++|+|+||++.+.+.++....
T Consensus        29 ~~~~an~~l~~Ga~p~m~~~~~e~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~  108 (272)
T 1ekq_A           29 TNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESA  108 (272)
T ss_dssp             HHHHHHHHHHHTCEEECCCCTTTHHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHH
T ss_pred             hhhhHHHHHHcCCchhhcCCHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHH
Confidence            46799999999999999999999999999999999999998766677888888888899999999999977655554344


Q ss_pred             HHHhc-cCCeEEcCCHHHHHHHHcCC-CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCC
Q 026308           81 LELVQ-LKPTVIRGNASEIIALSRAS-VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGV  158 (240)
Q Consensus        81 ~~~~~-~~~~vitPN~~E~~~L~g~~-~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~  158 (240)
                      +++++ .++++||||..|+++|+|.+ . ..+|+|...+.+++.+++++|+++++++|++||..++++++++.+.++.+.
T Consensus       109 ~~ll~~~~~~vitPN~~E~~~L~g~~~~-~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G~~~~i~~~~~~~~~~~~~  187 (272)
T 1ekq_A          109 RDIIREVRLAAIRGNAAEIAHTVGVTDW-LIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGH  187 (272)
T ss_dssp             HHHHHHSCCSEEEECHHHHHHHCC----------------HHHHHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCC
T ss_pred             HHHHccCCCeEECCCHHHHHHHhCCCcc-cccCccCCCCHHHHHHHHHHHHHHcCCEEEEECCCCEEEeCCEEEEEcCCC
Confidence            46664 47999999999999999976 4 335555333456788899999999888899999988888877888888777


Q ss_pred             ccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh--CCCccccHHHHHHHHhcCCHHHHhccccc
Q 026308          159 PMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM--AKGPASLRMHMIDCLHGLDQAALLSRTNI  236 (240)
Q Consensus       159 ~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~--~~~~g~~~~~~~~~l~~~~~~~~~~~~~~  236 (240)
                      +.+.+++|+||+|+|+++++++++ .++.+|+++|+.+++.|++.+..+  ..|+|++..+++|+|+.+..+++.+++++
T Consensus       188 ~~~~~ttGaGD~lag~iaa~la~g-~~~~~A~~~A~~~~~~A~~~a~~~~~~~g~g~~~~~~id~l~~~~~~~~~~~~~~  266 (272)
T 1ekq_A          188 KLLTKVTGAGCLLTSVVGAFCAVE-ENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATI  266 (272)
T ss_dssp             GGGGGSTTHHHHHHHHHHHHHTTC-SSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCCHHHHHHHCCE
T ss_pred             ccccCccCchHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHhcCHHHHHhhcce
Confidence            777788999999999999999996 899999999999999999998875  46889999999999999999999998888


Q ss_pred             ccc
Q 026308          237 TAL  239 (240)
Q Consensus       237 ~~~  239 (240)
                      +++
T Consensus       267 ~~~  269 (272)
T 1ekq_A          267 ERV  269 (272)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            753

>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*

Probab=100.00  E-value=1.2e-39  Score=296.29  Aligned_cols=225  Identities=28%  Similarity=0.435  Sum_probs=193.7

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcc-cCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPH-VRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNA   79 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~-~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~   79 (240)
                      +||+||++|++|+||+|+++++|+.++.+. +++++|++|++++  .+.+..+++.+++.++|+||||++++.+.+|.+.
T Consensus       276 ~n~~AN~~La~GasPiM~~~~~E~~e~~~~~~~alvin~G~l~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~  353 (540)
T 3nl6_A          276 QNFGANVTLALGSSPIMSEIQSEVNDLAAIPHATLLLNTGSVAP--PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLL  353 (540)
T ss_dssp             HHHHHHHHHHTTSEEECCCCHHHHHHHTTSTTCEEEEESSCSCC--HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhcCCHHHHHHHHhccCCeEEEeCCCCCH--HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHH
Confidence            589999999999999999999999999999 9999999999866  6788888888999999999999999988888766


Q ss_pred             HHHHhc-cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCC--hHHHHHHHHHHHHhcCCEEEEecCccEEEcC--------
Q 026308           80 CLELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHE--SMDAMEAARCLAEASGAIVAVSGAVDIVTDG--------  148 (240)
Q Consensus        80 ~~~~~~-~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~--~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~--------  148 (240)
                      .+++++ .+++|||||..|+++|+|......+|+|...+  .++..+++++|+++++++|++||..|+|+++        
T Consensus       354 ~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~D~I~dg~~~~~~~~  433 (540)
T 3nl6_A          354 NNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEFDFIADGTIEGKYSL  433 (540)
T ss_dssp             HHHHTTSCCCSEEEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEECSSSEEEEECCGGGBCCS
T ss_pred             HHHHHhhCCCeEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCCeEEECCCccccccc
Confidence            677775 47899999999999999975213456664222  3788899999999999999999999999988        


Q ss_pred             -----------cEEEEEecCC-ccCCCccchhhHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHhhhhhCCCccc
Q 026308          149 -----------RRVVGAHNGV-PMMQKITATGCSVTALIAAFVAVDPL---HAFEATASALSVYGIAGEMGMSMAKGPAS  213 (240)
Q Consensus       149 -----------~~~~~~~~~~-~~~~~~~GaGD~lag~iaa~la~~~~---~~~~A~~~A~~~~~~a~~~a~~~~~~~g~  213 (240)
                                 +.++.+++++ +.+.+++|+||+|+|+||++++++ .   ++++|+..|+.+++.|++.++++..|+|+
T Consensus       434 ~~~~~~~~~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~-~~~~~~~~Aa~~a~~~~~~Ag~~A~~~~~g~Gs  512 (540)
T 3nl6_A          434 SKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQ-PSEGNLFHAVVAGVMLYKAAGKIASEKCNGSGS  512 (540)
T ss_dssp             SSCCSSCCTTSSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTC-CTTCBHHHHHHHHHHHHHHHHHHHHHHCSSHHH
T ss_pred             cccccccccCCccEEEECCCChhhccCccCchHHHHHHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence                       6788899888 899988999999999999999996 5   69999999999999999999887678999


Q ss_pred             cHHHHHHHHhcCCHH
Q 026308          214 LRMHMIDCLHGLDQA  228 (240)
Q Consensus       214 ~~~~~~~~l~~~~~~  228 (240)
                      |..+++|+|+.+..+
T Consensus       513 f~~~llD~L~~l~~~  527 (540)
T 3nl6_A          513 FQVELIDALYRLTRE  527 (540)
T ss_dssp             HHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhccc
Confidence            999999999998765

>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A

Probab=99.95  E-value=7.4e-28  Score=202.37  Aligned_cols=179  Identities=16%  Similarity=0.181  Sum_probs=143.2

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHc
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSR  103 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g  103 (240)
                      +.++++|++++|+|+..+.   ...++++.+.+.+.|+|||+++...         +.+.  ..+++||||..|+++|+|
T Consensus        94 ~~l~~~davviGPGlg~~~---~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g  161 (279)
T 3rpz_A           94 QLEETYRAIAIGPGLPQTE---SVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTG  161 (279)
T ss_dssp             CCSSCCSEEEECTTCCCCH---HHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHC
T ss_pred             hhccCCCEEEECCCCCCCH---HHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhC
Confidence            3457899999999986543   2345556666778899999999653         1121  468999999999999999


Q ss_pred             CCCCCCcCCCCCCC-hHHHHHHHHHHHHhcCCEEEEecCccEEEcCc-EEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          104 ASVGPTKGVDSSHE-SMDAMEAARCLAEASGAIVAVSGAVDIVTDGR-RVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       104 ~~~~~~~~~~~~~~-~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      .+.         .+ .++..+++++|+++++++|++||..+++++++ .++..+.+.+.+. ++|+||+|+|+|++++++
T Consensus       162 ~~~---------~~~~~d~~~aa~~la~~~~~~VvlKG~~~vi~~~~g~~~~~~~g~~~~a-t~GtGD~Lag~iaa~lA~  231 (279)
T 3rpz_A          162 VPV---------NELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALA-KGGTGDTLTGMILGMLCC  231 (279)
T ss_dssp             CCH---------HHHTTSHHHHHHHHHHHHTSEEEECSTTCEEECTTSCEEECCCCCGGGC-STTHHHHHHHHHHHHHHH
T ss_pred             CCc---------cchHHHHHHHHHHHHHHcCeEEEEeCCCcEEECCCceEEEeCCCCCCCC-CCChHHHHHHHHHHHHHC
Confidence            754         12 24677889999999998999999999999876 4555555556665 599999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308          182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ  227 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~  227 (240)
                      + .++.+|++.|+++|+.|++.+.++....++.+.|+++.|+.+++
T Consensus       232 g-~~~~~A~~~a~~lh~~Ag~~a~~~~g~~~~~a~dl~~~lp~~~~  276 (279)
T 3rpz_A          232 H-EDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWK  276 (279)
T ss_dssp             C-SSHHHHHHHHHHHHHHHHHHHHHHSCTTSCCHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHH
Confidence            6 89999999999999999999888633478999999999987755

>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*

Probab=99.94  E-value=1.1e-26  Score=209.67  Aligned_cols=186  Identities=20%  Similarity=0.287  Sum_probs=146.3

Q ss_pred             CchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHH
Q 026308           22 EEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEII   99 (240)
Q Consensus        22 ~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~   99 (240)
                      +++.+.++++|++++|+|+..+....  ..+.+.+++.++|+||||++.....      +++++  ..+++||||..|++
T Consensus       312 ~~~~~~~~~~davviGpGlg~~~~~~--~~~~~~l~~~~~pvVlDadgl~~l~------~~ll~~~~~~~vlTPN~~E~~  383 (502)
T 3rss_A          312 QECLELSKDVDVVAIGPGLGNNEHVR--EFVNEFLKTLEKPAVIDADAINVLD------TSVLKERKSPAVLTPHPGEMA  383 (502)
T ss_dssp             HHHHHHHTTCSEEEECTTCCCSHHHH--HHHHHHHHHCCSCEEECHHHHHTCC------HHHHHHCSSCEEECCCHHHHH
T ss_pred             HHHHHHhccCCEEEEeCCCCCCHHHH--HHHHHHHHhcCCCEEEeCcccchhc------HHHHhccCCCEEEeCCHHHHH
Confidence            34566778999999999997654321  2222245667999999999965322      23332  36899999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      +|+|.+.      .  +..++ .+++++++++++++|++||..++++++++++..+.+.+.+.. +|+||+|+|++++++
T Consensus       384 ~L~g~~~------~--~~~~d-~~aa~~la~~~~~~VvlKG~~~vi~~~~~~~~~~~g~~~~at-~GsGD~Lag~iaa~l  453 (502)
T 3rss_A          384 RLVKKTV------G--DVKYN-YELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSK-GGSGDVLTGMIAGFI  453 (502)
T ss_dssp             HHHTCCH------H--HHTTC-HHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCCGGGSS-TTHHHHHHHHHHHHH
T ss_pred             HHhCCCc------c--chHHH-HHHHHHHHHHcCCEEEEeCCCeEEEcCCEEEEECCCCCcccc-CCchHHHHHHHHHHH
Confidence            9999753      0  11134 678899999998889999999999988777777766666654 999999999999999


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHH
Q 026308          180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQA  228 (240)
Q Consensus       180 a~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~  228 (240)
                      +++ .++.+|++.|+++|+.|++.+.+  .++++.+.|+++.|+.++++
T Consensus       454 A~g-~~~~~Aa~~A~~~hg~Ag~~aa~--g~~~~~a~dl~~~lp~~~~~  499 (502)
T 3rss_A          454 AQG-LSPLEASTVSVYLHGFAAELFEQ--DERGLTASELLRLIPEAIRR  499 (502)
T ss_dssp             HTT-CCHHHHHHHHHHHHHHHHHTCSS--CGGGCCHHHHHHHHHHHHHH
T ss_pred             hCC-CCHHHHHHHHHHHHHHHHHHHhc--CCCCcCHHHHHHHHHHHHHH
Confidence            996 89999999999999999998866  45789999999999987654

>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}

Probab=99.94  E-value=1e-26  Score=198.58  Aligned_cols=187  Identities=14%  Similarity=0.128  Sum_probs=139.3

Q ss_pred             chhhhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHH-hccCCeEEcCCHHHHHH
Q 026308           23 EIPDFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLEL-VQLKPTVIRGNASEIIA  100 (240)
Q Consensus        23 ~~~~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~-~~~~~~vitPN~~E~~~  100 (240)
                      .+.+++++.|++++|+|+. +++..+.+.++++..+ .++|+||||++......+    .++ ++..+++||||..|+++
T Consensus       118 ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~----~~l~L~~~~~viTPN~~E~~~  192 (311)
T 3bgk_A          118 RLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGSAINLLAKR----KPAIWPTKQIILTPHQKEWER  192 (311)
T ss_dssp             HHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETHHHHHHHHC----C-CCCSCSCEEEECCSCC-CT
T ss_pred             HHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCChhhhhccC----hhhcCCCCCEEECCcHHHHHH
Confidence            3455667899999999986 4444455555554332 478999999883211100    012 33468999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHH-HHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDA-MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~-~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      |+|.+.      +  +..++. .+++++|.+  +++|++||..+++++++.+|..+.+.+.+ +++|+||+|+|+|++++
T Consensus       193 L~g~~~------~--~~~~d~~~~aa~~l~~--g~~VvlkG~~~~i~~~~~~~~~~~~~~~~-~t~GtGD~Lag~iaa~l  261 (311)
T 3bgk_A          193 LSGLTI------P--EQIEAATQTALAHFPK--ETILVAKSHQTKIYQGQKIGHIQVGGPYQ-ATGGMGDTLAGMIAGFV  261 (311)
T ss_dssp             TTCCCS------T--TCCHHHHHHHHTTSCT--TCEEEECSSSCEEEETTEEEEECCCCGGG-CSTTHHHHHHHHHHHHH
T ss_pred             HhCCCC------C--cchhhHHHHHHHHHhc--CCEEEEeCCCeEEEECCEEEEECCCCCCC-CCCcHHHHHHHHHHHHH
Confidence            999765      1  122466 778888876  67789999888888755566655444444 47999999999999999


Q ss_pred             hc-CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHH
Q 026308          180 AV-DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQA  228 (240)
Q Consensus       180 a~-~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~  228 (240)
                      ++ + .++.+|+++|+++++.+++.+.++  |+++++.+++|.|+.++++
T Consensus       262 A~~g-~~~~eA~~~A~~~~~~ag~~a~~~--g~~~~a~dl~~~l~~~~~~  308 (311)
T 3bgk_A          262 AQFH-TDRFEVAAAAVFLHSYIADQLSKE--AYVVLPTRISAEITRVMKE  308 (311)
T ss_dssp             HHCC-SCHHHHHHHHHHHHHHHHHHHHTT--CSSCCHHHHHHHHHHHHHH
T ss_pred             HccC-CCHHHHHHHHHHHHHHHHHHHHhh--CCCCCHHHHHHHHHHHHHH
Confidence            99 8 799999999999999999988875  6899999999999987653

>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A

Probab=99.94  E-value=3.5e-26  Score=195.17  Aligned_cols=186  Identities=14%  Similarity=0.117  Sum_probs=137.0

Q ss_pred             chhhhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCCHHHHHH
Q 026308           23 EIPDFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIA  100 (240)
Q Consensus        23 ~~~~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN~~E~~~  100 (240)
                      .+..+++++|++++|+|+. +.+..+.+..+++..+ .++|+||||++......+    .++++ ..++|||||..|+++
T Consensus       104 ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~g~~ll~~~----~~~l~~~~~~viTPN~~E~~~  178 (310)
T 2r3b_A          104 LLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGSAITLFSQG----NFSLTYPEKVVFTPHQMEWQR  178 (310)
T ss_dssp             HHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETHHHHHHHHT----TCCCSSGGGEEEECCHHHHHH
T ss_pred             HHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCCcchhcccc----hhhhcCCCCEEEcCCHHHHHH
Confidence            3455667899999999986 4434455555544332 478999999883211100    01222 357999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHH-HHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDA-MEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~-~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      |+|.+.      +  +..++. .++++++    +++|++||..+++++++.+|..+.+.+.+. ++|+||+|+|+|++++
T Consensus       179 L~g~~~------~--~~~~~~a~~aA~~l----g~~VvlKG~~~vi~~~~~~~~~~~g~~~~~-t~GtGD~Lag~Iaa~l  245 (310)
T 2r3b_A          179 LSHLPI------E--QQTLANNQRQQAKL----GSTIVLKSHRTTIFHAGEPFQNTGGNPGMA-TGGTGDTLAGIIAGFL  245 (310)
T ss_dssp             HHCCCG------G--GCCHHHHHHHHHHH----TSEEEECSTTCEEECSSSCEECCCCCGGGC-STTHHHHHHHHHHHHH
T ss_pred             HhCCCC------C--cccchHHHHHHHHh----CcEEEEeCCceEEEECCEEEEECCCCCCCC-CCChHHHHHHHHHHHH
Confidence            999764      1  112344 5666665    678999999898887444665554444444 6999999999999999


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHH
Q 026308          180 AVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAA  229 (240)
Q Consensus       180 a~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~  229 (240)
                      +++ .++.+|++.|+++++.+++.+.++  |+++++.++++.|+.++++.
T Consensus       246 A~g-~~~~eA~~~A~~~~~~ag~~a~~~--g~~~~a~dl~~~l~~~~~~~  292 (310)
T 2r3b_A          246 AQF-KPTIETIAGAVYLHSLIGDDLAKT--DYVVLPTKISQALPTYMKKY  292 (310)
T ss_dssp             HHS-CSSHHHHHHHHHHHHHHHHHHTTT--CSSCCHHHHHHHHHHHHHHH
T ss_pred             HcC-CCHHHHHHHHHHHHHHHHHHHHhh--CCCCCHHHHHHHHHHHHHHH
Confidence            996 899999999999999999988875  68999999999999887654

>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}

Probab=99.91  E-value=3.1e-24  Score=192.18  Aligned_cols=179  Identities=16%  Similarity=0.172  Sum_probs=135.7

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCC
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG  107 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~  107 (240)
                      .+++|++++|||+-.+.. + +..+++    .+ |+|+|++++....     ..+.+ ..++|||||..|+++|+|... 
T Consensus       290 ~~~~~a~~iGPGlG~~~~-~-l~~~l~----~~-p~VlDADaL~~~~-----~~~~~-~~~~VlTPh~~E~~rL~g~~~-  355 (475)
T 3k5w_A          290 PNLLSAFALGMGLENIPK-D-FNRWLE----LA-PCVLDAGVFYHKE-----ILQAL-EKEAVLTPHPKEFLSLLNLVG-  355 (475)
T ss_dssp             CSSCSEEEECTTCSSCCT-T-HHHHHH----HS-CEEEEGGGGGSGG-----GGTTT-TSSEEEECCHHHHHHHHHHTS-
T ss_pred             ccCCCEEEEcCCCCCCHH-H-HHHHHh----cC-CEEEECcccCCch-----hhhcc-CCCEEECCCHHHHHHHhCCcc-
Confidence            368899999999843333 3 444442    35 9999999964211     11222 256999999999999998621 


Q ss_pred             CCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCH
Q 026308          108 PTKGVDSSHESMDAMEAARCLAEAS-GAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHA  186 (240)
Q Consensus       108 ~~~~~~~~~~~~~~~~~a~~l~~~~-~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~  186 (240)
                        .+++..+..++..+++++|++++ +++||+||..+++++++.++.++.+.+.+.+ +|+||+|+|+|+++++++ .++
T Consensus       356 --~~v~~~~~~~d~~~aa~~la~~~g~~~VvlKG~~~vI~~~~~~~~~~~g~~~mat-~GtGdvLsg~Iaa~lA~g-~~~  431 (475)
T 3k5w_A          356 --INISMLELLDNKLEIARDFSQKYPKVVLLLKGANTLIAHQGQVFINILGSVALAK-AGSGDVLAGLILSLLSQN-YTP  431 (475)
T ss_dssp             --CCCCTTSGGGSCC--CHHHHHHCTTEEEEECSSSEEEEETTEEEEECCCCGGGCS-TTHHHHHHHHHHHHHHTT-CCH
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHcCCeEEEEeCCCCEEECCCEEEEECCCCCCCCC-CCHHHHHHHHHHHHHHcC-CCH
Confidence              01111122345667889999999 7889999999999887788888878888875 999999999999999996 899


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308          187 FEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ  227 (240)
Q Consensus       187 ~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~  227 (240)
                      .+|+..|+++|+.|++.+ +  .++|+++.|+++.|+++.-
T Consensus       432 ~~Aa~~a~~lhg~ag~~a-~--~~~~~~a~dl~~~l~~~~~  469 (475)
T 3k5w_A          432 LDAAINASLAHALASLEF-K--NNYALTPLDLIEKIKQLEG  469 (475)
T ss_dssp             HHHHHHHHHHHHHGGGGC-S--STTCCCHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHHHHHHHHHh-c--cCCCcCHHHHHHHhhhhhc
Confidence            999999999999999987 3  4679999999999998753

>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*

Probab=99.89  E-value=9.9e-22  Score=166.68  Aligned_cols=182  Identities=16%  Similarity=0.128  Sum_probs=133.4

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcc-cc---hH---HHHHHhccCCeEEcCCHHHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASG-FR---LN---ACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~-~~---~~---~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      ..|++.  .|++ +.+.++.+.++++.+++.++++|+||++.+.+. ++   .+   ..++++ +.+++||||..|++.|
T Consensus        77 ~~~aik--~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll-~~adiitpN~~Ea~~L  153 (291)
T 3mbh_A           77 QFDAIY--TGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLI-TKADVITPNLTELFYL  153 (291)
T ss_dssp             CCSEEE--ECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHG-GGCSEECCBHHHHHHH
T ss_pred             ccCEEE--ECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHh-ccCCEEeCCHHHHHHH
Confidence            345554  6887 667777777777777666799999999986543 22   22   134555 4899999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------c-EEEcC--cEEEEEecCCccCCCccchhhH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------D-IVTDG--RRVVGAHNGVPMMQKITATGCS  170 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~-~i~~~--~~~~~~~~~~~~~~~~~GaGD~  170 (240)
                      +|.++.      ...+.+++.+++++|.+++...|++||..        + +++++  ++.+.++.+.. ..+++|+||+
T Consensus       154 ~g~~~~------~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~-~~dt~GaGD~  226 (291)
T 3mbh_A          154 LDEPYK------ADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL-PAHYPGTGDT  226 (291)
T ss_dssp             HTCCCC------SCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC-GGGSTTHHHH
T ss_pred             hCCCCC------CCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc-CCCCCChHHH
Confidence            998640      01256788889999998887889999532        2 45554  35656665443 3678999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhC--CCccccHHHHHHHH
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCL  222 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~--~~~g~~~~~~~~~l  222 (240)
                      |+|++++++++| .++.+|+++|..+...+++.+....  ...|...++.+..|
T Consensus       227 f~aai~a~l~~g-~~l~~A~~~A~~~~~~ai~~~~~~~~~~~~gv~~e~~L~~l  279 (291)
T 3mbh_A          227 FTSVITGSLMQG-DSLPMALDRATQFILQGIRATFGYEYDNREGILLEKVLHNL  279 (291)
T ss_dssp             HHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHTTTTSCCCGGGCSCHHHHGGGT
T ss_pred             HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHhcCCCcccCCcHHHHHHHH
Confidence            999999999996 8999999999999999998876631  23566666655554

>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}

Probab=99.88  E-value=4.3e-21  Score=160.85  Aligned_cols=170  Identities=22%  Similarity=0.198  Sum_probs=127.5

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhcCC-CEEEcccccCCcccc---h---HHHH-HHhccCCeEEcCCHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGK-PWVLDPVAAGASGFR---L---NACL-ELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~-~vvlDp~~~~~~~~~---~---~~~~-~~~~~~~~vitPN~~E~~~L  101 (240)
                      +.|++++  |++..  .+.+..+++.+++.+. |+|+||++......+   .   +..+ +++ ..+++||||..|++.|
T Consensus        74 ~~d~v~~--G~l~~--~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll-~~~diltpN~~E~~~L  148 (271)
T 2i5b_A           74 GVDAMKT--GMLPT--VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLA-PLATVITPNLFEASQL  148 (271)
T ss_dssp             CCSEEEE--CCCCS--HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTG-GGCSEECCBHHHHHHH
T ss_pred             CCCEEEE--CCCCC--HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhH-hhCcEEcCCHHHHHHH
Confidence            5677776  45433  3667788888888888 699999876544322   1   1222 444 3789999999999999


Q ss_pred             HcCC-CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc--------cEEEcCcEEEEEecCCccCCCccchhhHHH
Q 026308          102 SRAS-VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV--------DIVTDGRRVVGAHNGVPMMQKITATGCSVT  172 (240)
Q Consensus       102 ~g~~-~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~--------~~i~~~~~~~~~~~~~~~~~~~~GaGD~la  172 (240)
                      +|.+ .         .+.+++.+++++|.+.+...||+||+.        ++++++++.+.++.+.....+++|+||+|+
T Consensus       149 ~g~~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~  219 (271)
T 2i5b_A          149 SGMDEL---------KTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFS  219 (271)
T ss_dssp             HTCCCC---------CSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHH
T ss_pred             hCCCCC---------CCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHH
Confidence            9976 4         345678888999988777789999443        367776666666655555567899999999


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCcccc
Q 026308          173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASL  214 (240)
Q Consensus       173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~  214 (240)
                      |+++++++++ .++.+|+++|+.++..+++.......|.|..
T Consensus       220 a~~~~~l~~g-~~~~~A~~~A~~~~~~~~~~~~~~g~g~~~~  260 (271)
T 2i5b_A          220 AAVTAELAKG-AEVKEAIYAAKEFITAAIKESFPLNQYVGPT  260 (271)
T ss_dssp             HHHHHHHHTT-CCHHHHHHHHHHHHHHHHHTCCCSSSSCCBC
T ss_pred             HHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHhhccCCCCCCc
Confidence            9999999996 8999999999999999998776543455543

>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*

Probab=99.88  E-value=1.5e-21  Score=165.35  Aligned_cols=166  Identities=15%  Similarity=0.063  Sum_probs=127.8

Q ss_pred             cccCcEEEecCCC-CCChHHHHHHHHHHHHhcC--CCEEEcccccCCccc---chH---HHHH-HhccCCeEEcCCHHHH
Q 026308           29 PHVRALYVNVGTL-SANWLPSMKAAAQLASQLG--KPWVLDPVAAGASGF---RLN---ACLE-LVQLKPTVIRGNASEI   98 (240)
Q Consensus        29 ~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~--~~vvlDp~~~~~~~~---~~~---~~~~-~~~~~~~vitPN~~E~   98 (240)
                      .+.|+++  .|++ +....+.+.++++.+++.+  .++|+||++.+.++.   ..+   ..++ ++ ..+++||||..|+
T Consensus        76 ~~~d~v~--~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll-~~~diitpN~~E~  152 (289)
T 3pzs_A           76 KDCDAVL--SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEAL-PASDMIAPNLLEL  152 (289)
T ss_dssp             GGCCEEE--ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHH-HHCSEECCCHHHH
T ss_pred             cCCCEEE--ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhh-ccCCEEeCCHHHH
Confidence            3677754  5775 5567788888888888766  789999999876542   111   1222 34 4799999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEec-C-cc--------EEEcCcEEEEEecCCccC--CCccc
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSG-A-VD--------IVTDGRRVVGAHNGVPMM--QKITA  166 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG-~-~~--------~i~~~~~~~~~~~~~~~~--~~~~G  166 (240)
                      +.|+|.++         .+.+++.+++++|.+++...|++|| . .+        +++++++.+.++.+....  .+++|
T Consensus       153 ~~L~g~~~---------~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~G  223 (289)
T 3pzs_A          153 EQLSGERV---------ENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVG  223 (289)
T ss_dssp             HHHHTSCC---------CSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTT
T ss_pred             HHHhCCCC---------CCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCc
Confidence            99999876         4567888999999888888899995 3 22        566767777666444343  56899


Q ss_pred             hhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          167 TGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       167 aGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +||+|+|++++++++| .++.+|+++|+.+...+++.+.+.
T Consensus       224 aGD~f~a~~~~~l~~g-~~~~~A~~~A~~~~~~~i~~t~~~  263 (289)
T 3pzs_A          224 VGDLTSGLLLVNLLKG-EPLDKALEHVTAAVYEVMLKTQEM  263 (289)
T ss_dssp             HHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999996 899999999999999998877664

>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*

Probab=99.86  E-value=5.9e-21  Score=161.21  Aligned_cols=180  Identities=16%  Similarity=0.128  Sum_probs=128.2

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEcccccCCcc-c---chHH---HHHHhccCCeEEcCCHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPVAAGASG-F---RLNA---CLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~~~~~~~-~---~~~~---~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      ..|++.  .|++.+.  +.++.+.+.+++. +.++|+||++.+.++ +   ..+.   .++++ +.+++||||..|++.|
T Consensus        74 ~~daik--~G~l~s~--~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll-~~adiitpN~~Ea~~L  148 (282)
T 3h74_A           74 HFDQAL--IGYVGSV--ALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLI-QQADVILPNTTEAALL  148 (282)
T ss_dssp             CCSEEE--ECCCCSH--HHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHG-GGCSEECCCHHHHHHH
T ss_pred             ccCEEE--ECCCCCH--HHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHh-ccCCEECCCHHHHHHH
Confidence            455555  5786332  3345555555554 588999999886443 2   2222   34555 4899999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHH-hcC-CEEEEecC-----cc-EEEc-CcEEEEEecCCccCCCccchhhHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAE-ASG-AIVAVSGA-----VD-IVTD-GRRVVGAHNGVPMMQKITATGCSVT  172 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~-~~~-~~VvitG~-----~~-~i~~-~~~~~~~~~~~~~~~~~~GaGD~la  172 (240)
                      +|.++         .+.+++.+++++|.+ .+. ..|++||.     .+ ++++ +++.+.++.+.. ..+++|+||+|+
T Consensus       149 ~g~~~---------~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v-~~dt~GaGD~fs  218 (282)
T 3h74_A          149 TGAPY---------QVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL-PGHYNGTGDTLA  218 (282)
T ss_dssp             HTCCC---------CSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC-SSCCTTHHHHHH
T ss_pred             hCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC-CCCCcCHHHHHH
Confidence            99875         234567788999988 444 57999963     34 3453 555666654433 367899999999


Q ss_pred             HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCC---CccccHHHHHHHHhcC
Q 026308          173 ALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAK---GPASLRMHMIDCLHGL  225 (240)
Q Consensus       173 g~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~---~~g~~~~~~~~~l~~~  225 (240)
                      |++++++++| .++.+|+++|..+...+++.+.....   ..|...++.+..|..+
T Consensus       219 aai~a~l~~g-~~l~~A~~~A~~~~~~ai~~~~~~~~g~~~~Gv~~e~~L~~l~~~  273 (282)
T 3h74_A          219 AVIAGLLGRG-YPLAPTLARANQWLNMAVAETIAQNRTDDRQGVALGDLLQAILAL  273 (282)
T ss_dssp             HHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHHTTCSCTTSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHhhCCCCchhcCCcHHHHHHHHHhh
Confidence            9999999996 89999999999999999988776422   4577777777776543

>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2

Probab=99.86  E-value=1.1e-20  Score=157.09  Aligned_cols=168  Identities=26%  Similarity=0.297  Sum_probs=120.6

Q ss_pred             cCcEEEecCCCCCChHHHHHHHHHHHHhcC-CCEEEcccccCCcccch---H---HH-HHHhccCCeEEcCCHHHHHHHH
Q 026308           31 VRALYVNVGTLSANWLPSMKAAAQLASQLG-KPWVLDPVAAGASGFRL---N---AC-LELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~-~~vvlDp~~~~~~~~~~---~---~~-~~~~~~~~~vitPN~~E~~~L~  102 (240)
                      .+++.+  |++.+  .+.+..+++.+++.+ +++++||++....+.+.   .   .. .+++ ..+++||||..|++.|+
T Consensus        71 ~~~v~~--G~l~~--~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll-~~~dil~pN~~E~~~L~  145 (258)
T 1ub0_A           71 LHAAKT--GALGD--AAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLF-PLADLVTPNRLEAEALL  145 (258)
T ss_dssp             CSEEEE--CCCCS--HHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTG-GGCSEECCBHHHHHHHH
T ss_pred             CCEEEE--CCcCC--HHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhc-ccCeEEeCCHHHHHHHh
Confidence            566665  55443  355677888888888 89999998754322211   1   11 2344 36899999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc------cEEEcCcEEEEEecCCccCCCccchhhHHHHHH
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV------DIVTDGRRVVGAHNGVPMMQKITATGCSVTALI  175 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~i  175 (240)
                      |.+.         .+.+++.+++++|.+.+...||+| |..      ++++++++.++++.......+++|+||+|+|++
T Consensus       146 g~~~---------~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~  216 (258)
T 1ub0_A          146 GRPI---------RTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAI  216 (258)
T ss_dssp             CSCC---------CSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHH
T ss_pred             CCCC---------CCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHH
Confidence            9765         355678888899988555568899 543      466777777777655555567899999999999


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccc
Q 026308          176 AAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPAS  213 (240)
Q Consensus       176 aa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~  213 (240)
                      +++++++ .++.+|+++|+.+...+++.+.+...|+|.
T Consensus       217 ~~~l~~g-~~~~~a~~~a~~~~~~~~~~~~~~~~g~~~  253 (258)
T 1ub0_A          217 AALLAKG-RPLAEAVAEAKAYLTRALKTAPSLGHGHGP  253 (258)
T ss_dssp             HHHHHTT-CCHHHHHHHHHHHHHHHHHTCCCCSSSSCC
T ss_pred             HHHHHcC-CCHHHHHHHHHHHHHHHHHHhhccCCCCCC
Confidence            9999996 899999999999988888876654345554

>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1e-20  Score=173.23  Aligned_cols=170  Identities=15%  Similarity=0.167  Sum_probs=121.2

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc---hHH---HH-HHhccCCeEEcCCHHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR---LNA---CL-ELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~---~~~---~~-~~~~~~~~vitPN~~E~~~L~  102 (240)
                      +.|+|.+|++  +.+.++.+.++++..++.+.|+|+||++...++.+   .+.   .+ +++ +.+++||||..|++.|+
T Consensus        91 ~~daIkiG~l--s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll-~~a~iitPN~~Ea~~L~  167 (550)
T 3rm5_A           91 KCNVIKTGML--TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVA-PFADILTPNIPECYKLL  167 (550)
T ss_dssp             CCSEEEECSC--CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTG-GGCSEECCBHHHHHHHH
T ss_pred             CCCEEEECCC--CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhh-CcceEEecCHHHHHHHh
Confidence            5677776544  55566666666666655688999999986543321   111   22 344 47999999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEecCc------------cEEE--cCcEEEEEecCCccCCCccch
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASG-AIVAVSGAV------------DIVT--DGRRVVGAHNGVPMMQKITAT  167 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~VvitG~~------------~~i~--~~~~~~~~~~~~~~~~~~~Ga  167 (240)
                      |.+..       ..+.+++.+++++|.++++ ..||+||+.            ++++  ++++.+.++.+.....+++|+
T Consensus       168 g~~~~-------i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~Gt  240 (550)
T 3rm5_A          168 GEERK-------VNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGT  240 (550)
T ss_dssp             SCCCC-------CCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTH
T ss_pred             CCCCC-------CCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcCh
Confidence            97420       0345788899999999988 589999642            1455  456666666444434578999


Q ss_pred             hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCC
Q 026308          168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKG  210 (240)
Q Consensus       168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~  210 (240)
                      ||+|+|+|++++++| .++.+|++.|+.+...+++.+.....|
T Consensus       241 GD~fsaaiaa~La~G-~~l~eAv~~A~~~v~~ai~~~~~~g~g  282 (550)
T 3rm5_A          241 GCTLASAIASNLARG-YSLPQSVYGGIEYVQNAVAIGCDVTKE  282 (550)
T ss_dssp             HHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHCBCCBCT
T ss_pred             hHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            999999999999996 899999999999999998877654334

>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}

Probab=99.86  E-value=2.2e-20  Score=158.99  Aligned_cols=163  Identities=18%  Similarity=0.125  Sum_probs=118.4

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhcC------CCEEEcccccCCcccch-----HHHHHHhccCCeEEcCCHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQLG------KPWVLDPVAAGASGFRL-----NACLELVQLKPTVIRGNASE   97 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~------~~vvlDp~~~~~~~~~~-----~~~~~~~~~~~~vitPN~~E   97 (240)
                      ++|+|.  +|++ +.+.++.+.++++.+++.+      .++|+||++.+.+....     +..++++ +.+++||||..|
T Consensus        76 ~~daV~--tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll-~~adiitPN~~E  152 (300)
T 3zs7_A           76 NYRYIL--TGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELV-PLADIVTPNYFE  152 (300)
T ss_dssp             GCSEEE--ECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHG-GGCSEECCCHHH
T ss_pred             cCCEEE--ECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHh-hhCCEecCCHHH
Confidence            567655  6886 6667777777777776654      78999999987632211     1234455 489999999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEec-Ccc-------EEEc-C------cEEEEEecCCccCC
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSG-AVD-------IVTD-G------RRVVGAHNGVPMMQ  162 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG-~~~-------~i~~-~------~~~~~~~~~~~~~~  162 (240)
                      ++.|+|.++         .+.+++.+++++|.+++...||+|| ..+       +++. +      ++.+.++.+.... 
T Consensus       153 a~~L~g~~~---------~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-  222 (300)
T 3zs7_A          153 ASLLSGVTV---------NDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-  222 (300)
T ss_dssp             HHHHHSSCC---------CSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-
T ss_pred             HHHHhCCCC---------CCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-
Confidence            999999876         4677888999999988888899994 322       3433 3      4566666444333 


Q ss_pred             CccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          163 KITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       163 ~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +++|+||+|+|++++.+ .| .++.+|+++|..+...+++.+.+.
T Consensus       223 ~~~GtGD~fsaal~a~l-~g-~~~~~Av~~A~~~v~~~i~~t~~~  265 (300)
T 3zs7_A          223 RYTGTGDVFAACLLAFS-HS-HPMDVAIGKSMAVLQELIIATRKE  265 (300)
T ss_dssp             CBTTHHHHHHHHHHHHH-TT-SCHHHHHHHHHHHHHHHHHHTTC-
T ss_pred             CCcCHHHHHHHHHHHHH-cC-CCHHHHHHHHHHHHHHHHHHHHHh
Confidence            57999999999999999 75 899999999999999999877653

>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*

Probab=99.85  E-value=8.5e-20  Score=154.48  Aligned_cols=160  Identities=19%  Similarity=0.127  Sum_probs=116.7

Q ss_pred             cCcEEEecCCCCCChHHHHHHHHHHHHhcCCC-EEEcccccCCccc---ch---HHHHH-HhccCCeEEcCCHHHHHHHH
Q 026308           31 VRALYVNVGTLSANWLPSMKAAAQLASQLGKP-WVLDPVAAGASGF---RL---NACLE-LVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~-vvlDp~~~~~~~~---~~---~~~~~-~~~~~~~vitPN~~E~~~L~  102 (240)
                      +|++++|  ++.+  .+.+..+++.+++.+.+ +|+||.+....+.   ..   +...+ ++ ..+++||||..|++.|+
T Consensus        95 ~~~v~~G--~l~~--~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll-~~~dil~pN~~Ea~~L~  169 (288)
T 1jxh_A           95 IDTTKIG--MLAE--TDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLL-PQVSLITPNLPEAAALL  169 (288)
T ss_dssp             CSEEEEC--CCCS--HHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTG-GGCSEEECBHHHHHHHH
T ss_pred             CCEEEEC--CCCC--HHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHH-hhCcEEcCCHHHHHHHc
Confidence            6777754  4432  36678888889988985 9999987532211   11   11222 44 37899999999999999


Q ss_pred             cC-CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308          103 RA-SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSVTAL  174 (240)
Q Consensus       103 g~-~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~  174 (240)
                      |. ..         .+.+++.+++++|.+.+...||+|++.       ++++++++.+.++.+.....+++|+||+|+|+
T Consensus       170 g~~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~  240 (288)
T 1jxh_A          170 DAPHA---------RTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAA  240 (288)
T ss_dssp             TCCCC---------CSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHH
T ss_pred             CCCCC---------CCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHH
Confidence            97 54         456778888999988777789999442       56677666666665444455789999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Q 026308          175 IAAFVAVDPLHAFEATASALSVYGIAGEMGM  205 (240)
Q Consensus       175 iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~  205 (240)
                      ++++++++ .++.+|+++|+.+.+.+.+...
T Consensus       241 ~~a~l~~g-~~~~~A~~~A~a~a~~~v~~~~  270 (288)
T 1jxh_A          241 LAALRPRH-RSWGETVNEAKAWLSAALAQAD  270 (288)
T ss_dssp             HHHHGGGS-SSHHHHHHHHHHHHHHHHTTGG
T ss_pred             HHHHHHcC-CCHHHHHHHHHHHHHHHHHhhc
Confidence            99999996 8999999999999998887664

>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*

Probab=99.83  E-value=1.6e-19  Score=152.14  Aligned_cols=166  Identities=14%  Similarity=0.031  Sum_probs=119.6

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHh--cCCCEEEcccccCCc--cc-chHHH----HHHhccCCeEEcCCHHHH
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQ--LGKPWVLDPVAAGAS--GF-RLNAC----LELVQLKPTVIRGNASEI   98 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~--~~~~vvlDp~~~~~~--~~-~~~~~----~~~~~~~~~vitPN~~E~   98 (240)
                      ++.++++++|. +.+....+.+.++++.+++  .++++++||.+...+  .+ .....    .+++ ..+++||||..|+
T Consensus        86 ~~~~~~v~~G~-l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll-~~~dil~pN~~E~  163 (283)
T 2ddm_A           86 LRQLRAVTTGY-MGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLL-PLAQGITPNIFEL  163 (283)
T ss_dssp             CTTCCEEEECC-CSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTG-GGCSEECCBHHHH
T ss_pred             cccCCEEEECC-cCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhh-hhceEecCCHHHH
Confidence            44678887642 3333445667778888877  689999999865421  11 11111    2244 3789999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc-------c-EEEcCcEEEEEecCCccCCCccchhh
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV-------D-IVTDGRRVVGAHNGVPMMQKITATGC  169 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~-------~-~i~~~~~~~~~~~~~~~~~~~~GaGD  169 (240)
                      +.|+|.+.         .+.+++.+++++|.+.+...||+| |..       + +++++++.++++..... .+++|+||
T Consensus       164 ~~L~g~~~---------~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGD  233 (283)
T 2ddm_A          164 EILTGKNC---------RDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGD  233 (283)
T ss_dssp             HHHHTSCC---------SSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHH
T ss_pred             HHHhCCCC---------CCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHH
Confidence            99999765         455678888888887777789999 554       2 55666676666654443 56799999


Q ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          170 SVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       170 ~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      +|+|+++++++++ .++.+|+++|+.+.+.+.+....
T Consensus       234 af~a~~~~~l~~g-~~~~~A~~~A~a~a~~~v~~~~~  269 (283)
T 2ddm_A          234 LFCAQLISGLLKG-KALTDAVHRAGLRVLEVMRYTQQ  269 (283)
T ss_dssp             HHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999996 89999999999999888876655

>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*

Probab=99.82  E-value=6.5e-19  Score=150.08  Aligned_cols=154  Identities=16%  Similarity=0.121  Sum_probs=119.3

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccC-CeEEcCCHHHHHHHHcCCCC
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLK-PTVIRGNASEIIALSRASVG  107 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~-~~vitPN~~E~~~L~g~~~~  107 (240)
                      ...+++++...++.....+.+..+++.+++.++++++||..        ....+++... +++|+||..|++.|+|.+. 
T Consensus       129 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~--------~~l~~~l~~~~~dil~~N~~E~~~l~g~~~-  199 (309)
T 3umo_A          129 ESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSG--------EALSAALAIGNIELVKPNQKELSALVNREL-  199 (309)
T ss_dssp             CTTCEEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCH--------HHHHHHTSSCCBSEECCBHHHHHHHHTSCC-
T ss_pred             CCCCEEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCc--------HHHHHHhccCCCeEEEeCHHHHHHHhCCCC-
Confidence            45678888633344445677889999999999999999975        2234555433 6999999999999999765 


Q ss_pred             CCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          108 PTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       108 ~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                              .+.+++.+++++|.+++. ..|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.+.++ .
T Consensus       200 --------~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g-~  270 (309)
T 3umo_A          200 --------TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A  270 (309)
T ss_dssp             --------CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTT-C
T ss_pred             --------CCHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcC-C
Confidence                    345678888999998886 468888 7665 556666777777666666788999999999999999986 8


Q ss_pred             CHHHHHHHHHHHHHHH
Q 026308          185 HAFEATASALSVYGIA  200 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a  200 (240)
                      ++.+|+++|+.+++.+
T Consensus       271 ~~~~a~~~A~~~aa~~  286 (309)
T 3umo_A          271 SLEEMVRFGVAAGSAA  286 (309)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999998865544

>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*

Probab=99.82  E-value=8.5e-19  Score=150.46  Aligned_cols=158  Identities=15%  Similarity=0.042  Sum_probs=119.9

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHcC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g~  104 (240)
                      .++.+|++++...++.....+.+..+++.+++.++++++||.+        ....+++.  ..+++++||..|++.|+|.
T Consensus       126 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~--------~~~~~~l~~~~~~dil~~N~~E~~~l~g~  197 (323)
T 2f02_A          126 LIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSG--------DSLRQVLQGPWKPYLIKPNLEELEGLLGQ  197 (323)
T ss_dssp             HHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCT--------HHHHHHHHSSCCCSEECCBHHHHHHHHTC
T ss_pred             hccCCCEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhccCCCeEEecCHHHHHHHhCC
Confidence            4578999998633333223356678888899999999999985        12344554  4799999999999999997


Q ss_pred             CCCCCcCCCCCC-Ch-HHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          105 SVGPTKGVDSSH-ES-MDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       105 ~~~~~~~~~~~~-~~-~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      +.         . +. +++.+.+++|.+++...|++| |..+ +++++++.+.++.++..+.+++|+||+|+|.+++.++
T Consensus       198 ~~---------~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~  268 (323)
T 2f02_A          198 DF---------SENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLA  268 (323)
T ss_dssp             CC---------CSSCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred             CC---------CCCcHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHH
Confidence            53         2 33 567777888877766678888 7655 4456677777776666667889999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++ .++.+|+++|+.+++.+..
T Consensus       269 ~g-~~~~~a~~~A~~~aa~~v~  289 (323)
T 2f02_A          269 KD-APAAELLKWGMAAGMANAQ  289 (323)
T ss_dssp             TT-CCHHHHHHHHHHHHHHHHH
T ss_pred             cC-CCHHHHHHHHHHHHHHHHc
Confidence            86 8999999999987776554

>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}

Probab=99.82  E-value=8.3e-19  Score=149.15  Aligned_cols=155  Identities=22%  Similarity=0.207  Sum_probs=118.2

Q ss_pred             hcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           28 TPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        28 ~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      ++.+|++++. |+ +.....+.+..+++.+++.++++++||.+        ....++++..+++++||..|++.|+|...
T Consensus       123 ~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~dil~~N~~E~~~l~g~~~  193 (306)
T 2jg5_A          123 TTSEDIVIVA-GSVPSSIPSDAYAQIAQITAQTGAKLVVDAEK--------ELAESVLPYHPLFIKPNKDELEVMFNTTV  193 (306)
T ss_dssp             CCTTCEEEEE-SCCCTTSCTTHHHHHHHHHHHHCCEEEEECCH--------HHHHHHGGGCCSEECCBHHHHHHHTTSCC
T ss_pred             ccCCCEEEEe-CCCCCCCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhcCCeEEecCHHHHHHHhCCCC
Confidence            4568888886 54 33222355678888899999999999985        12345554368999999999999999754


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                               .+.+++.+++++|.+.+...|++| |..+ +++++++.++++.++....+++|+||+|+|.+++.++++ .
T Consensus       194 ---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g-~  263 (306)
T 2jg5_A          194 ---------NSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASG-L  263 (306)
T ss_dssp             ---------CSHHHHHHHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTT-C
T ss_pred             ---------CCHHHHHHHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcC-C
Confidence                     355677788888887666678889 7655 456667777777665556788999999999999999986 8


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 026308          185 HAFEATASALSVYGIAG  201 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a~  201 (240)
                      ++.+|+++|+.+++.+.
T Consensus       264 ~~~~a~~~A~a~aa~~v  280 (306)
T 2jg5_A          264 SIEKAFQQAVACGTATA  280 (306)
T ss_dssp             CHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            99999999998766554

>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*

Probab=99.81  E-value=1.7e-18  Score=149.11  Aligned_cols=158  Identities=16%  Similarity=0.096  Sum_probs=120.2

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHHcC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~g~  104 (240)
                      .++.+|++++...++.....+.+..+++.+++.++++++||.+        ...++++.  ..+++++||..|++.|+|.
T Consensus       144 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~~~dil~~N~~E~~~l~g~  215 (330)
T 2jg1_A          144 MMEKVEAVAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSG--------ATLQTVLENPYKPTVIKPNISELYQLLNQ  215 (330)
T ss_dssp             HGGGCSEEEEESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCH--------HHHHHHHTSSSCCSEECCBHHHHHHHTTS
T ss_pred             hcCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCc--------HHHHHHHhccCCceEEEeCHHHHHHHhCC
Confidence            3578999998633332222355678888999999999999975        12345554  3799999999999999987


Q ss_pred             CCCCCcCCCCCC-ChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          105 SVGPTKGVDSSH-ESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       105 ~~~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      +.         . +.+++.+++++|.+++...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+.+.+.+
T Consensus       216 ~~---------~~~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~  286 (330)
T 2jg1_A          216 PL---------DESLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILN  286 (330)
T ss_dssp             CC---------CCCHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred             CC---------CCCHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHc
Confidence            53         2 45677778888887766778899 7765 44566677777766666778899999999999988998


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q 026308          182 DPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      + .++.+|+++|+.+++.+.+
T Consensus       287 g-~~l~~al~~A~a~aa~~v~  306 (330)
T 2jg1_A          287 H-ENDHDLLKKANTLGMLNAQ  306 (330)
T ss_dssp             T-CCHHHHHHHHHHHHHHHHT
T ss_pred             C-CCHHHHHHHHHHHHHHHhc
Confidence            6 8999999999987665543

>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*

Probab=99.81  E-value=6.1e-19  Score=150.26  Aligned_cols=156  Identities=22%  Similarity=0.140  Sum_probs=120.8

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.++.+|+++++.+.+    .+.+..+++.+++.++++++||.+..  .+    ..+++ ..+++|+||..|++.|+|.+
T Consensus       130 ~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~--~~----~~~ll-~~~dil~~N~~E~~~l~g~~  198 (309)
T 1rkd_A          130 ERIANASALLMQLESP----LESVMAAAKIAHQNKTIVALNPAPAR--EL----PDELL-ALVDIITPNETEAEKLTGIR  198 (309)
T ss_dssp             HHHHHCSEEEECSSSC----HHHHHHHHHHHHHTTCEEEECCCSCC--CC----CHHHH-TTCSEECCCHHHHHHHHSCC
T ss_pred             HhcccCCEEEEeCCCC----HHHHHHHHHHHHHcCCEEEEECCccc--cc----hHHHH-hhCCEEEcCHHHHHHHhCCC
Confidence            4567899999864332    25667888889999999999998742  11    13455 48999999999999999976


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                      .         .+.+++.+.+++|.+.+...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+++.++++ 
T Consensus       199 ~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g-  268 (309)
T 1rkd_A          199 V---------ENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEE-  268 (309)
T ss_dssp             C---------SSHHHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT-
T ss_pred             C---------CCHHHHHHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcC-
Confidence            4         345677888888988776778888 7655 455667777777665556788999999999999999986 


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++.+|+++|+.+++.+..
T Consensus       269 ~~~~~a~~~a~~~aa~~~~  287 (309)
T 1rkd_A          269 KPLPEAIRFAHAAAAIAVT  287 (309)
T ss_dssp             CCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHcC
Confidence            8999999999987665543

>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1

Probab=99.81  E-value=2.9e-18  Score=145.95  Aligned_cols=158  Identities=16%  Similarity=0.096  Sum_probs=120.4

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCC
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG  107 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~  107 (240)
                      ++.+|++++...++.....+.+..+++.+++.++++++||.+        ....++++..+++++||..|++.|+|.+. 
T Consensus       123 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~dil~~N~~E~~~l~g~~~-  193 (306)
T 2abq_A          123 LEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSG--------EALHEVLAAKPSFIKPNHHELSELVSKPI-  193 (306)
T ss_dssp             CCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCH--------HHHHHHGGGCCSEECCBHHHHHHHHTSCC-
T ss_pred             ccCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhcCCcEEecCHHHHHHHhCCCC-
Confidence            467899888633333222355678888899999999999975        12345553379999999999999999754 


Q ss_pred             CCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCC
Q 026308          108 PTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLH  185 (240)
Q Consensus       108 ~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~  185 (240)
                              .+.+++.+.+++|.+++...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+.+.+.++ .+
T Consensus       194 --------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g-~~  264 (306)
T 2abq_A          194 --------ASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEG-KS  264 (306)
T ss_dssp             --------CSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTT-CC
T ss_pred             --------CCHHHHHHHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcC-CC
Confidence                    355677788888888776778888 7655 445666777777655556788999999999999999986 89


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 026308          186 AFEATASALSVYGIAGEM  203 (240)
Q Consensus       186 ~~~A~~~A~~~~~~a~~~  203 (240)
                      +.+|+++|+.+++.+...
T Consensus       265 ~~~a~~~A~a~aa~~v~~  282 (306)
T 2abq_A          265 LEDAVPFAVAAGSATAFS  282 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            999999999887766553

>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}

Probab=99.81  E-value=3.8e-19  Score=151.10  Aligned_cols=155  Identities=15%  Similarity=0.087  Sum_probs=120.9

Q ss_pred             chhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHH
Q 026308           23 EIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        23 ~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~  102 (240)
                      +..+.++.+|+++++.+.+    .+.+..+++.+++.++++++||.+..      ....+++ .++++++||..|++.|+
T Consensus       126 ~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll-~~~dil~~N~~E~~~l~  194 (304)
T 3ry7_A          126 NAKDAIINADFVVAQLEVP----IPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELL-SLIDIIVPNETEAELLS  194 (304)
T ss_dssp             TTHHHHHTCSEEEEETTSC----HHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHH-TTCSEECCBHHHHHHHH
T ss_pred             HHHHHhccCCEEEEcCCCC----HHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHH-HhCCEEecCHHHHHHHh
Confidence            3345678899999974432    46678888999999999999997631      1123555 48999999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      |.+.         .+.+++.+.+++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.+.
T Consensus       195 g~~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~  265 (304)
T 3ry7_A          195 GIKV---------TNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLN  265 (304)
T ss_dssp             SCCC---------CSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCC
T ss_pred             CCCC---------CChhHHHHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHH
Confidence            9865         456778888999987777778889 6655 4566677788876666667889999999999998888


Q ss_pred             cCC-CCHHHHHHHHHHHHH
Q 026308          181 VDP-LHAFEATASALSVYG  198 (240)
Q Consensus       181 ~~~-~~~~~A~~~A~~~~~  198 (240)
                      + + .++.+|+++|+.+++
T Consensus       266 ~-g~~~~~~a~~~A~~~aa  283 (304)
T 3ry7_A          266 K-SQDNLADAIDFGNKASS  283 (304)
T ss_dssp             T-TCTTHHHHHHHHHHHHH
T ss_pred             c-CCCCHHHHHHHHHHHHH
Confidence            8 5 699999999887644

>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*

Probab=99.80  E-value=1.9e-18  Score=147.23  Aligned_cols=155  Identities=15%  Similarity=0.129  Sum_probs=116.9

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCC-eEEcCCHHHHHHHHcCCC
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKP-TVIRGNASEIIALSRASV  106 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~-~vitPN~~E~~~L~g~~~  106 (240)
                      ++. |++++...++.....+.+..+++.+++.++++++||.+.        ...+.+...+ ++++||..|++.|+|.+.
T Consensus       129 ~~~-~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~~dil~~N~~E~~~l~g~~~  199 (309)
T 3cqd_A          129 ESG-AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQKELSALVNREL  199 (309)
T ss_dssp             CTT-CEEEEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHH--------HHHHHTTTCCBSEECCBHHHHHHHHTSCC
T ss_pred             hcC-CEEEEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChH--------HHHHHHHhCCCEEEeeCHHHHHHHhCCCC
Confidence            456 888886333433445677888999999999999999851        1233343478 999999999999999754


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhc-CCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEAS-GAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~-~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~  183 (240)
                               .+.+++.+++++|.+.+ ...|++| |..+ +++++++.++++.++..+.+++|+||+|+|.+.+.+.++ 
T Consensus       200 ---------~~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g-  269 (309)
T 3cqd_A          200 ---------TQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-  269 (309)
T ss_dssp             ---------CSTTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTT-
T ss_pred             ---------CCHHHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcC-
Confidence                     34456778888888876 5568888 7655 445666677777655556788999999999999889986 


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAG  201 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~  201 (240)
                      .++.+|+++|+.+++.+.
T Consensus       270 ~~~~~a~~~A~~~aa~~~  287 (309)
T 3cqd_A          270 ASLEEMVRFGVAAGSAAT  287 (309)
T ss_dssp             CCHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            899999999998766543

>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A

Probab=99.79  E-value=2.8e-18  Score=146.90  Aligned_cols=165  Identities=16%  Similarity=0.091  Sum_probs=119.8

Q ss_pred             hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      +.++.+|++++. |+ +.....+.+..+++.+++.++++++||..        ....+.+...+++++||..|++.|+|.
T Consensus       129 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~l~~~l~~~~dil~~N~~E~~~l~g~  199 (320)
T 3ie7_A          129 KKVKKEDMVVIA-GSPPPHYTLSDFKELLRTVKATGAFLGCDNSG--------EYLNLAVEMGVDFIKPNEDEVIAILDE  199 (320)
T ss_dssp             HHCCTTCEEEEE-SCCCTTCCHHHHHHHHHHHHHHTCEEEEECCH--------HHHHHHHHHCCSEECCBTTGGGGGSCT
T ss_pred             HHhcCCCEEEEe-CCCCCCCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHHHhcCCeEEeeCHHHHHHHhCC
Confidence            456789999995 55 34444577888999999999999999975        123344434899999999999999997


Q ss_pred             CCCCCcCCCCCC-ChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          105 SVGPTKGVDSSH-ESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       105 ~~~~~~~~~~~~-~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      +.         . +.+++.    ++.++ ...|++| |..+ +++++++.++++.++..+.+++||||+|+|.+.+.+.+
T Consensus       200 ~~---------~~~~~~~~----~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~  265 (320)
T 3ie7_A          200 KT---------NSLEENIR----TLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAM  265 (320)
T ss_dssp             TC---------CCHHHHHH----HHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred             Cc---------CCCHHHHH----HHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHc
Confidence            54         2 233333    33333 5568888 7665 45677778888876666678899999999999999998


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHH
Q 026308          182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMI  219 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~  219 (240)
                      | .++.+|+++|+.+++.+.+    . .|.+....+-+
T Consensus       266 g-~~~~~a~~~A~a~aa~~v~----~-~G~~~~~~~ev  297 (320)
T 3ie7_A          266 N-MPITETLKVATGCSASKVM----Q-QDSSSFDLEAA  297 (320)
T ss_dssp             T-CCHHHHHHHHHHHHHHHHT----S-SSSSCCCHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHHHh----C-cCCCCCCHHHH
Confidence            6 8999999999987665544    2 45555544333

>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*

Probab=99.78  E-value=1.6e-17  Score=141.80  Aligned_cols=165  Identities=16%  Similarity=0.140  Sum_probs=117.8

Q ss_pred             hcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCC--EEEcccccCC----cc-c-c---hHHHHH-HhccCCeEEcCC
Q 026308           28 TPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKP--WVLDPVAAGA----SG-F-R---LNACLE-LVQLKPTVIRGN   94 (240)
Q Consensus        28 ~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~--vvlDp~~~~~----~~-~-~---~~~~~~-~~~~~~~vitPN   94 (240)
                      ++.+|++++  |+. +....+.+.++++.+++.+.+  +++||.+...    +. + .   ....++ ++ +.+++||||
T Consensus        74 ~~~~~~v~~--G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll-~~~dil~pN  150 (312)
T 2yxt_A           74 MNKYDYVLT--GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVV-PLADIITPN  150 (312)
T ss_dssp             CCCCSEEEE--CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTG-GGCSEECCC
T ss_pred             CccCCEEEE--CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhh-hhCCEEcCC
Confidence            456788764  554 333455566788888887754  8999987543    11 1 1   012222 44 478999999


Q ss_pred             HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCc-------cEEE-------cC-----cEEEEE
Q 026308           95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAV-------DIVT-------DG-----RRVVGA  154 (240)
Q Consensus        95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~-------~~i~-------~~-----~~~~~~  154 (240)
                      ..|++.|+|.+.         .+.+++.+++++|.+.+...||+| |..       .+++       ++     ++.+++
T Consensus       151 ~~Ea~~L~g~~~---------~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  221 (312)
T 2yxt_A          151 QFEAELLSGRKI---------HSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRM  221 (312)
T ss_dssp             HHHHHHHHSCCC---------CSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEE
T ss_pred             HHHHHHHhCCCC---------CCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEE
Confidence            999999999765         456778888899988777789999 542       2444       43     256666


Q ss_pred             ecCCccCCCccchhhHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          155 HNGVPMMQKITATGCSVTALIAAFVAV-DPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       155 ~~~~~~~~~~~GaGD~lag~iaa~la~-~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      +.++... +++||||+|+|++++.+++ + .++.+|+++|+.+.+.+.+....
T Consensus       222 ~~~~v~v-dttGAGDaf~a~~~~~l~~~g-~~l~~a~~~A~a~a~~~v~~~~~  272 (312)
T 2yxt_A          222 DIRKVDA-VFVGTGDLFAAMLLAWTHKHP-NNLKVACEKTVSTLHHVLQRTIQ  272 (312)
T ss_dssp             EEECCSS-CCSSHHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eecccCC-CCCCchHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence            6444444 7899999999999999997 6 79999999999999888876655

>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1

Probab=99.78  E-value=3.9e-18  Score=146.85  Aligned_cols=156  Identities=18%  Similarity=0.143  Sum_probs=118.7

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      .++.+|+++++.. .+   .+.+..+++.+++.++++++||.+...     ....+++ ..+++|+||..|++.|+|.+.
T Consensus       151 ~l~~~~~v~~~~~-~~---~~~~~~~~~~a~~~g~~v~~Dp~~~~~-----~~~~~ll-~~~dil~~N~~Ea~~l~g~~~  220 (331)
T 2fv7_A          151 VISRAKVMVCQLE-IT---PATSLEALTMARRSGVKTLFNPAPAIA-----DLDPQFY-TLSDVFCCNESEAEILTGLTV  220 (331)
T ss_dssp             HHHHCSEEEECSS-SC---HHHHHHHHHHHHHTTCEEEECCCSCCT-----TCCTHHH-HTCSEEEEEHHHHHHHHSSCC
T ss_pred             hhccCCEEEEecC-CC---HHHHHHHHHHHHHcCCEEEEeCCcccc-----cchHHHH-hcCCEEEeCHHHHHHHhCCCC
Confidence            4678999998633 22   256678888899999999999987421     1112455 389999999999999999754


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCc--EEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGR--RVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~--~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                               .+.+++.+.+++|.+++...|++| |..+. +++++  +.+.++..+..+.+++|+||+|+|.+++.+++ 
T Consensus       221 ---------~~~~~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~-  290 (331)
T 2fv7_A          221 ---------GSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAY-  290 (331)
T ss_dssp             ---------CSHHHHHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHH-
T ss_pred             ---------CChhHHHHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHh-
Confidence                     355677888888988777779999 76554 45555  56667765555678899999999999999988 


Q ss_pred             C--CCHHHHHHHHHHHHHHHHH
Q 026308          183 P--LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~--~~~~~A~~~A~~~~~~a~~  202 (240)
                      +  .++.+|+++|+.+++.+.+
T Consensus       291 g~~~~~~~a~~~A~~~aa~~v~  312 (331)
T 2fv7_A          291 YPNLSLEDMLNRSNFIAAVSVQ  312 (331)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHhC
Confidence            5  6999999999988776554

>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}

Probab=99.78  E-value=1.8e-17  Score=142.50  Aligned_cols=157  Identities=15%  Similarity=0.101  Sum_probs=118.4

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.+..+|+++++.. .+    +.+..+++ +++.++++++||....    ......+++ ..+++|+||..|++.|+|.
T Consensus       131 ~~~~~~~~~~~~~~~-~~----~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l-~~~dil~~N~~E~~~l~g~  199 (328)
T 3kzh_A          131 REIFENAEYTVLDSD-NP----EIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLI-KDFHTIKPNRHEAEILAGF  199 (328)
T ss_dssp             HHHHHTCSEEEEESS-CH----HHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTG-GGCSEECCBHHHHHHHHTS
T ss_pred             HHhhccCCEEEEeCC-cH----HHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHh-cCCcEEeCCHHHHHHHHCC
Confidence            345678999998743 32    45566666 7788999999997621    001112334 3799999999999999997


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      +.         .+.+++.+++++|.+.+...|++| |..+ +++++++.+.++.++..+.+++|+||+|+|.+.+.+.++
T Consensus       200 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g  270 (328)
T 3kzh_A          200 PI---------TDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNK  270 (328)
T ss_dssp             CC---------CSHHHHHHHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred             CC---------CCHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcC
Confidence            65         456778888889988777778888 7665 445666677777666666788999999999999889986


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+|+++|+.+++.+.+
T Consensus       271 -~~~~~a~~~A~a~aa~~v~  289 (328)
T 3kzh_A          271 -MPIEDIVKFAMTMSNITIS  289 (328)
T ss_dssp             -CCHHHHHHHHHHHHHHHHT
T ss_pred             -CCHHHHHHHHHHHHHHHhc
Confidence             8999999999987766554

>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.77  E-value=3.1e-18  Score=144.98  Aligned_cols=165  Identities=14%  Similarity=0.073  Sum_probs=118.6

Q ss_pred             hhhhcccCcEEEecCCC--CCChHHHHHHHHHHHHh-cCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHH
Q 026308           25 PDFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQ-LGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIAL  101 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~-~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L  101 (240)
                      .+.++.+|+++++ ++.  .+...+.+..+++.+++ .+.++++||.+.... +..+...++++ .+++|+||..|++.|
T Consensus       109 ~~~~~~~~~v~~g-~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~-~~~~~~~~~l~-~~dil~~N~~E~~~l  185 (296)
T 2qhp_A          109 KRLALNTRAVCFG-SLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDF-YTKEVLRESFK-RCNILKINDEELVTI  185 (296)
T ss_dssp             HHHHHTEEEEEEC-SGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTC-CCHHHHHHHHH-HCSEEEEEHHHHHHH
T ss_pred             HhhhcCCCEEEEC-ChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccc-cCHHHHHHHHH-HCCEEECCHHHHHHH
Confidence            3456788998875 332  22244567777777776 689999999764211 12233455664 789999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      +|...         .+.+++.+++++|.++ +...|++| |..+ +++++++.++++..+....+++|+||+|+|.+++.
T Consensus       186 ~g~~~---------~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~  256 (296)
T 2qhp_A          186 SRMFG---------YPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCAS  256 (296)
T ss_dssp             HHHTT---------CTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred             hcccC---------CCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHH
Confidence            98643         1223456678888876 45678888 7655 45666777777765555678899999999999999


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          179 VAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       179 la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++++ .++.+|+++|+.+++.+..
T Consensus       257 l~~g-~~~~~a~~~a~~~aa~~v~  279 (296)
T 2qhp_A          257 ILNG-KSVPEAHKLAVEVSAYVCT  279 (296)
T ss_dssp             HHHT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHcC-CCHHHHHHHHHHHHHHHHc
Confidence            9986 8999999999987665543

>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*

Probab=99.77  E-value=9.7e-18  Score=144.28  Aligned_cols=161  Identities=16%  Similarity=0.058  Sum_probs=119.2

Q ss_pred             hhhcccCcEEEe---cCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCc--cc--chHHHHHHhccCCeEEcCCHHHH
Q 026308           26 DFTPHVRALYVN---VGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS--GF--RLNACLELVQLKPTVIRGNASEI   98 (240)
Q Consensus        26 ~~~~~~d~vvi~---~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~--~~--~~~~~~~~~~~~~~vitPN~~E~   98 (240)
                      +.++.+|+++++   ++++++...+.+.++++.+++.++++++||......  ..  .....++++ ..+++++||..|+
T Consensus       141 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~E~  219 (328)
T 4e69_A          141 AAMARADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGA-AVSDIALPSFEDE  219 (328)
T ss_dssp             HHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHH-TTCSEECCBHHHH
T ss_pred             HHhcCCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHH-HhCCEEeCCHHHH
Confidence            567889999996   223344456777888899999999999999642110  00  012234555 4899999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCC-ccCCCccchhhHHHHHH
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGV-PMMQKITATGCSVTALI  175 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~-~~~~~~~GaGD~lag~i  175 (240)
                      +.|+|.+              ++.+++++|.+.+...||+| |..+ +++++++.+.++..+ ..+.+++||||+|+|.+
T Consensus       220 ~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~  285 (328)
T 4e69_A          220 AAWFGDA--------------GPDATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGL  285 (328)
T ss_dssp             HHHHTCS--------------SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHH
T ss_pred             HHHcCCC--------------CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHH
Confidence            9999852              24466777877766779999 6655 456667777777654 45678899999999999


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          176 AAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       176 aa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++.++++ .++.+|+++|+.+++.+.+
T Consensus       286 ~~~l~~g-~~l~~a~~~A~~~aa~~v~  311 (328)
T 4e69_A          286 LDSVLAG-QPLETAIAAAAALAGQVVQ  311 (328)
T ss_dssp             HHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHCC-CCHHHHHHHHHHHHHHHHc
Confidence            9999996 8999999999987766544

>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*

Probab=99.77  E-value=1.4e-17  Score=144.74  Aligned_cols=155  Identities=14%  Similarity=0.132  Sum_probs=118.1

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|+++++ |+.... .+.+..+++.+++.++++++||.+..   +      +++ ..+++|+||..|++.|+| 
T Consensus       181 ~~~l~~~~~v~~~-g~~~~~-~~~~~~~~~~a~~~g~~v~~D~~~~~---~------~~l-~~~dil~pN~~Ea~~l~g-  247 (352)
T 4e84_A          181 DVLLPQHDVVLMS-DYAKGG-LTHVTTMIEKARAAGKAVLVDPKGDD---W------ARY-RGASLITPNRAELREVVG-  247 (352)
T ss_dssp             HHHGGGCSEEEEE-CCSSSS-CSSHHHHHHHHHHTTCEEEEECCSSC---C------STT-TTCSEECCBHHHHHHHHC-
T ss_pred             HHhcccCCEEEEe-CCCCCC-HHHHHHHHHHHHhcCCEEEEECCCcc---h------hhc-cCCcEEcCCHHHHHHHhC-
Confidence            4567889999996 432111 12257788889999999999997621   1      233 479999999999999999 


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      ..         .+.+++.+.+++|.++ +...||+| |..+ +++++++.++++..+..+.+++||||+|+|.+++.+++
T Consensus       248 ~~---------~~~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~  318 (352)
T 4e84_A          248 QW---------KSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGA  318 (352)
T ss_dssp             CC---------SSHHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHT
T ss_pred             CC---------CCHHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHc
Confidence            43         3567888888998864 45678888 7765 45677778888876666778899999999999999998


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q 026308          182 DPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      | .++.+|+++|+.+++.+..
T Consensus       319 g-~~l~~al~~A~aaaa~~v~  338 (352)
T 4e84_A          319 G-VPLVDAVVLANRAAGIVVG  338 (352)
T ss_dssp             T-CCHHHHHHHHHHHHHHHHT
T ss_pred             C-CCHHHHHHHHHHHHHHHhc
Confidence            6 8999999999987665543

>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*

Probab=99.77  E-value=2.8e-18  Score=150.01  Aligned_cols=166  Identities=15%  Similarity=0.095  Sum_probs=121.7

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|+++++ |+......+.+.++++.+++.++++++||..........+...++++ .+++|+||..|++.|+|.
T Consensus       173 ~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~-~~dil~~N~~Ea~~l~g~  250 (370)
T 3vas_A          173 WSLVEKAQVYYIA-GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS-YSNIVFGNESEAEAYGEV  250 (370)
T ss_dssp             HHHHHHCSEEEEE-GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT-TCSEEEEEHHHHHHHHHH
T ss_pred             HHHHhhCCEEEEE-eeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHh-hCCEEEcCHHHHHHHhcc
Confidence            3567889999996 55322234677888999999999999999742111011123455664 899999999999999996


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHh-------cCCEEEEe-cCcc-EEEc--CcEEEEEecCCc---cCCCccchhhH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEA-------SGAIVAVS-GAVD-IVTD--GRRVVGAHNGVP---MMQKITATGCS  170 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~-------~~~~Vvit-G~~~-~i~~--~~~~~~~~~~~~---~~~~~~GaGD~  170 (240)
                      ..         .+.+++.+++++|.+.       +...||+| |..+ ++++  +++.++++.++.   .+.+++||||+
T Consensus       251 ~~---------~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDa  321 (370)
T 3vas_A          251 HG---------LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDA  321 (370)
T ss_dssp             TT---------CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHH
T ss_pred             cC---------CCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHH
Confidence            53         2345777888888875       55668888 7765 4556  666677775543   56788999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      |+|.+.+.+++| .++.+|+++|+.+++.+..
T Consensus       322 F~ag~l~~l~~g-~~l~~a~~~A~aaAa~~v~  352 (370)
T 3vas_A          322 FAAGFIADYIRG-KPMITSLHAAVKAAAYIIC  352 (370)
T ss_dssp             HHHHHHHHHTTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHc
Confidence            999999999986 8999999999987665544

>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.77  E-value=1.7e-17  Score=143.81  Aligned_cols=172  Identities=10%  Similarity=-0.008  Sum_probs=120.7

Q ss_pred             hhhcccCcEEEecCCC--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccch----HHHHHHhccCCeEEcCCHHHHH
Q 026308           26 DFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL----NACLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~----~~~~~~~~~~~~vitPN~~E~~   99 (240)
                      ..++.+|+++++...+  ++...+.+..+++.+++.++++++||..... .+..    +...++++ .+++|+||..|++
T Consensus       134 ~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~-~~~~~~~~~~~~~ll~-~~dil~~N~~E~~  211 (351)
T 2afb_A          134 KILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRAR-LWTKEEAQKVMIPFME-YVDVLIANEEDIE  211 (351)
T ss_dssp             HHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTT-TCCHHHHHHHHHHHGG-GCSEEEECHHHHH
T ss_pred             HhhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchh-cCChHHHHHHHHHHHh-hCCEEEecHHHHH
Confidence            3467899999863322  3445577788889999999999999985321 1111    22345554 7899999999999


Q ss_pred             HHHcCCCCCCcCCCC-CCChHHHHHHHHHHHHh-cCCEEEEe-cCcc---------EEEcCcEEEEEecCCccCCCccch
Q 026308          100 ALSRASVGPTKGVDS-SHESMDAMEAARCLAEA-SGAIVAVS-GAVD---------IVTDGRRVVGAHNGVPMMQKITAT  167 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~-~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~~---------~i~~~~~~~~~~~~~~~~~~~~Ga  167 (240)
                      .|+|... ..++.+. ..+.+++.+++++|.++ +...|++| |..+         +++++++.++++.++..+.+++|+
T Consensus       212 ~l~g~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGA  290 (351)
T 2afb_A          212 KVLGISV-EGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGA  290 (351)
T ss_dssp             HHHCCCC-SCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTH
T ss_pred             HHhCCCc-ccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCc
Confidence            9999753 1001110 01456677888888876 55578888 7642         556666777666544456688999


Q ss_pred             hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308          168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      ||+|+|.+++.+.++ .++.+|+++|+.+++.+.
T Consensus       291 GDaF~ag~~~~l~~g-~~l~~a~~~A~~~aa~~v  323 (351)
T 2afb_A          291 GDSFAGALIYGSLMG-FDSQKKAEFAAAASCLKH  323 (351)
T ss_dssp             HHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence            999999999999986 899999999998766544

>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}

Probab=99.77  E-value=6.1e-18  Score=146.32  Aligned_cols=168  Identities=11%  Similarity=-0.025  Sum_probs=121.4

Q ss_pred             hhhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc-------hHHHHHHhccCCeEEcCC
Q 026308           25 PDFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR-------LNACLELVQLKPTVIRGN   94 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~-------~~~~~~~~~~~~~vitPN   94 (240)
                      .+.++.+|+++++ |+ +  ++...+.+.++++.+++.++++++||...... +.       .....+++ ..+++|+||
T Consensus       124 ~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~-~~~~~~~~~~~~~~~ll-~~~dil~~N  200 (346)
T 3ktn_A          124 EAFLAEVDMVHIC-GISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSL-NTANSALFMRQQYERIL-PYCDIVFGS  200 (346)
T ss_dssp             HHHHTTCSEEEEC-THHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGG-CCHHHHHHHHHHHHHHG-GGCSEEECC
T ss_pred             HHHhCCCCEEEEe-CccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHH-cCCccHHHHHHHHHHHH-HhCCEEEcc
Confidence            4567899999985 54 2  33344677888999999999999999632110 11       12344566 489999999


Q ss_pred             HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHh-cCCEEEEe-cCc--------cEEEcCcEEEEEecCCccCCCc
Q 026308           95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEA-SGAIVAVS-GAV--------DIVTDGRRVVGAHNGVPMMQKI  164 (240)
Q Consensus        95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~-~~~~Vvit-G~~--------~~i~~~~~~~~~~~~~~~~~~~  164 (240)
                      ..|++.|+|.+..     ....+.+++.+++++|.++ +...||+| |..        .+++++++.++++..+..+.++
T Consensus       201 ~~E~~~l~g~~~~-----~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdt  275 (346)
T 3ktn_A          201 RRDLVELLGFIPR-----EDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDR  275 (346)
T ss_dssp             HHHHHHTSCCCCC-----TTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCC
T ss_pred             HHHHHHHhCCCCC-----ccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCC
Confidence            9999999997520     0002346778888999886 45568888 764        3556666677766555556788


Q ss_pred             cchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308          165 TATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       165 ~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      +||||+|+|.+.+.+.++ .++.+|+++|+.+++.+.
T Consensus       276 tGAGDaF~ag~~~~l~~g-~~l~~a~~~A~a~aa~~v  311 (346)
T 3ktn_A          276 IGAGDAYAAGILYGYSQN-WSLEKAVTFATVNGVLAH  311 (346)
T ss_dssp             TTHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHT
T ss_pred             CchhHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence            999999999999999986 899999999998766543

>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}

Probab=99.76  E-value=2.9e-17  Score=141.69  Aligned_cols=160  Identities=16%  Similarity=0.102  Sum_probs=113.7

Q ss_pred             hhhcccCcEEEecCC---CCCChHHHHHHHHHHHHhcCCCEEEcccccCCc--ccc--hHHHHHHhccCCeEEcCCHHHH
Q 026308           26 DFTPHVRALYVNVGT---LSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS--GFR--LNACLELVQLKPTVIRGNASEI   98 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~---~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~--~~~--~~~~~~~~~~~~~vitPN~~E~   98 (240)
                      +.++.+|++++. |+   .++...+.+..+++.+++.++++++||......  ...  .....+++ ..+++|+||..|+
T Consensus       148 ~~l~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~pN~~Ea  225 (336)
T 4du5_A          148 AWLLSARHLHAT-GVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLA-TRADWVLPGMEEG  225 (336)
T ss_dssp             HHHTTEEEEEEE-SSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHH-TTCSEECCBHHHH
T ss_pred             hHhccCCEEEEc-CchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHH-HhCCEEECCHHHH
Confidence            456788888875 54   255556777888999999999999999732110  000  11234455 4899999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHH
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALI  175 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~i  175 (240)
                      +.|+|.+              +..++++.|.+++...|++| |..+ +++++++.++++..+.. +.+++|+||+|+|.+
T Consensus       226 ~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~  291 (336)
T 4du5_A          226 RFLTGET--------------TPEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGV  291 (336)
T ss_dssp             HHHHCCC--------------SHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHH
T ss_pred             HHHhCCC--------------CHHHHHHHHHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHH
Confidence            9999852              23456777887777778999 6654 45667777777766555 678899999999999


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          176 AAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       176 aa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++.+++| .++.+|+++|+.+++.+..
T Consensus       292 ~~~l~~g-~~l~~a~~~A~~~aa~~v~  317 (336)
T 4du5_A          292 ISALLDG-LGVPEAVKRGAWIGARAVQ  317 (336)
T ss_dssp             HHHHHTT-CCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHcC-CCHHHHHHHHHHHHHHHhc
Confidence            9999986 8999999999987665543

>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.76  E-value=9.5e-18  Score=144.43  Aligned_cols=155  Identities=13%  Similarity=0.046  Sum_probs=116.7

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhcc--CCeEEcCCHHH-HHHHHc
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQL--KPTVIRGNASE-IIALSR  103 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~--~~~vitPN~~E-~~~L~g  103 (240)
                      .++.+|+++++..++.....+.+..+++.+++.++++++||.+        ....+++..  .+++++||..| ++.|+|
T Consensus       143 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~l~~~~~~dil~~N~~E~~~~l~g  214 (331)
T 2ajr_A          143 TLSKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTP--------RLLERIYEGPEFPNVVKPDLRGNHASFLG  214 (331)
T ss_dssp             HHTTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCH--------HHHHHHHHSSCCCSEECCCCTTCCSCBTT
T ss_pred             hcccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCh--------HHHHHHHhcCCCCeEEEeCccchHHHHhC
Confidence            4578999998633333222356678888899999999999985        123445542  48999999999 999998


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEe-cCCccCCCccchhhHHHHHHHHHHh
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAH-NGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~-~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      .+.         .+.+++.+.+++|.++ ...|++| |..+ +++++++.++++ ..+..+.+++|+||+|+|.+.+.+.
T Consensus       215 ~~~---------~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~  284 (331)
T 2ajr_A          215 VDL---------KTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFI  284 (331)
T ss_dssp             BCC---------CSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHH
T ss_pred             CCC---------CCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHH
Confidence            654         3456777888888888 6678888 7765 445666677777 6555567889999999999988888


Q ss_pred             -cCCCCHHHHHHHHHHHHHHH
Q 026308          181 -VDPLHAFEATASALSVYGIA  200 (240)
Q Consensus       181 -~~~~~~~~A~~~A~~~~~~a  200 (240)
                       .+ .++.+|+++|+.+++.+
T Consensus       285 ~~g-~~~~~al~~A~a~aa~~  304 (331)
T 2ajr_A          285 KHG-ANFLEMAKFGFASALAA  304 (331)
T ss_dssp             HHC-SCHHHHHHHHHHHHHHH
T ss_pred             HcC-CCHHHHHHHHHHHHHHH
Confidence             86 89999999998866544

>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*

Probab=99.76  E-value=4.5e-18  Score=147.06  Aligned_cols=165  Identities=18%  Similarity=0.125  Sum_probs=117.2

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|+++++ |+......+.+..+++.+++.++++++||.+........+...++++ .+++|+||..|++.|+|.
T Consensus       156 ~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~  233 (345)
T 1bx4_A          156 WMLVEKARVCYIA-GFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMP-YVDILFGNETEAATFARE  233 (345)
T ss_dssp             HHHHHHCSEEEEE-GGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGG-GCSEEEEEHHHHHHHHHH
T ss_pred             HHHHhhCCEEEEE-EEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhc-cCCEEeCCHHHHHHHhcc
Confidence            4556789999985 44211224677888899999999999999752110000112344554 789999999999999986


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHH------hcCCEEEEe-cCcc-EEEcCcEEEEEecCCc---cCCCccchhhHHHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAE------ASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP---MMQKITATGCSVTA  173 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~------~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag  173 (240)
                      ..         .+.+++.+++++|.+      .+...|++| |..+ +++++++.++++..+.   .+.+++|+||+|+|
T Consensus       234 ~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~a  304 (345)
T 1bx4_A          234 QG---------FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG  304 (345)
T ss_dssp             TT---------CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHH
T ss_pred             cC---------CCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHH
Confidence            42         122456677888877      355678888 7655 4456666777775443   46688999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      .+++.++++ .++.+|+++|+.+++.+.
T Consensus       305 g~~~~l~~g-~~~~~a~~~A~~~aa~~v  331 (345)
T 1bx4_A          305 GFLSQLVSD-KPLTECIRAGHYAASIII  331 (345)
T ss_dssp             HHHHHHTTT-CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHH
Confidence            999999986 899999999998766544

>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*

Probab=99.75  E-value=9.4e-18  Score=145.26  Aligned_cols=166  Identities=12%  Similarity=0.038  Sum_probs=119.2

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.++++++. |+......+.+.++++.+++.++++++||..........+...++++ .+++++||..|++.|++.
T Consensus       157 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~-~~dil~~N~~Ea~~l~~~  234 (347)
T 3otx_A          157 VRAMDESRIFYFS-GFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLP-YTDIIVANRHEAKEFANM  234 (347)
T ss_dssp             HHHHHHCSEEEEE-GGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGG-GCSEEEEEHHHHHHHHHH
T ss_pred             HHHHhhCCEEEEe-eeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHh-hCCEEecCHHHHHHHhcc
Confidence            3567889999996 54222234677889999999999999999742111111123455664 899999999999999986


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHH------hcCCEEEEe-cCcc-EEEcCcEEEEEecCCc---cCCCccchhhHHHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAE------ASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP---MMQKITATGCSVTA  173 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~------~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag  173 (240)
                      ..         .+.+++.+++++|.+      .+...|++| |..+ +++++++.++++.++.   .+.+++|+||+|+|
T Consensus       235 ~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a  305 (347)
T 3otx_A          235 MK---------WDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMG  305 (347)
T ss_dssp             HT---------CCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHH
T ss_pred             cC---------CCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHH
Confidence            32         122355667777774      445568888 8765 4566677777765443   56788999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+...+.++ .++.+|+++|+.+++.+.+
T Consensus       306 g~l~~l~~g-~~l~~a~~~a~~~aa~~v~  333 (347)
T 3otx_A          306 GFLSAYAVG-KDLRRCCETGHYTAQEVIQ  333 (347)
T ss_dssp             HHHHHHTTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            999889986 8999999999987766544

>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}

Probab=99.75  E-value=2e-17  Score=141.61  Aligned_cols=163  Identities=15%  Similarity=0.004  Sum_probs=116.7

Q ss_pred             chhhhhcccCcEEEecCC----CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc----hHHHHHHhccCCeEEcCC
Q 026308           23 EIPDFTPHVRALYVNVGT----LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR----LNACLELVQLKPTVIRGN   94 (240)
Q Consensus        23 ~~~~~~~~~d~vvi~~G~----~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~----~~~~~~~~~~~~~vitPN   94 (240)
                      ++.+.++.+|+++++ |+    +++...+.+..+++.+++.++++++||......-..    .....+++ ..+++++||
T Consensus       122 ~~~~~l~~~~~v~~~-g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~di~~~n  199 (319)
T 3lhx_A          122 AICEELANFDYLYLS-GISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQML-ECTDIAFLT  199 (319)
T ss_dssp             HHHHHHTTCSEEEEE-HHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHH-TTCSEEEEE
T ss_pred             hHHHHhcCCCEEEEc-CchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHH-hhCCcccCC
Confidence            344667899999996 32    234445677889999999999999999752210000    11234455 489999999


Q ss_pred             HHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEE-EEecC---CccCCCccchh
Q 026308           95 ASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVV-GAHNG---VPMMQKITATG  168 (240)
Q Consensus        95 ~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~-~~~~~---~~~~~~~~GaG  168 (240)
                      ..|++.|+|.+              +..+++++|.+.+...||+| |..+ +++++++.+ .++..   ...+.+++|+|
T Consensus       200 ~~E~~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAG  265 (319)
T 3lhx_A          200 LDDEDALWGQQ--------------PVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAG  265 (319)
T ss_dssp             HHHHHHHHCCC--------------CHHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHH
T ss_pred             HHHHHHHhCCC--------------CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCcc
Confidence            99999999852              23456777887777778888 7655 445554433 66643   33456889999


Q ss_pred             hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          169 CSVTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       169 D~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      |+|+|.+++.+.++ .++.+|+++|+.+++.+.+
T Consensus       266 Daf~a~~~~~l~~g-~~~~~a~~~A~~~aa~~v~  298 (319)
T 3lhx_A          266 DSFSAGYLAVRLTG-GSAENAAKRGHLTASTVIQ  298 (319)
T ss_dssp             HHHHHHHHHHHTTT-CCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHcC-CCHHHHHHHHHHHHHhhhc
Confidence            99999999999986 8999999999987665543

>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}

Probab=99.75  E-value=8e-18  Score=146.84  Aligned_cols=167  Identities=17%  Similarity=0.114  Sum_probs=118.5

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|+++++ |+......+.+.++++.+++.++++++||..........+...++++ .+++++||..|++.|+|.
T Consensus       171 ~~~~~~~~~v~i~-G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~-~~dil~~N~~Ea~~l~g~  248 (365)
T 3loo_A          171 RAYLQGAQFFYVS-GFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFP-YVDVLFGNETEAIALAKE  248 (365)
T ss_dssp             HHHHHHCSEEEEE-GGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGG-GCSEEEEEHHHHHHHHHH
T ss_pred             HHHHhhCCEEEEe-eeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHH-hCCEEecCHHHHHHHhcc
Confidence            3567889999996 55322234667888899999999999999642111111223456664 899999999999999986


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHh------cCCEEEEe-cCcc-EEE--cCcEEEEEecCCc---cCCCccchhhHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEA------SGAIVAVS-GAVD-IVT--DGRRVVGAHNGVP---MMQKITATGCSV  171 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~------~~~~Vvit-G~~~-~i~--~~~~~~~~~~~~~---~~~~~~GaGD~l  171 (240)
                      ..         .+.+++.+++++|.+.      +...||+| |..+ +++  ++++.+.++..+.   .+.+++|+||+|
T Consensus       249 ~~---------~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF  319 (365)
T 3loo_A          249 FN---------YGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAF  319 (365)
T ss_dssp             TT---------CCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHH
T ss_pred             cC---------CCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHH
Confidence            43         2234566778888764      44568888 8765 456  6666677775543   567889999999


Q ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Q 026308          172 TALIAAFVAVDPLHAFEATASALSVYGIAGEM  203 (240)
Q Consensus       172 ag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~  203 (240)
                      .|.+.+.+.+| .++.+|+++|+.+++.+++.
T Consensus       320 ~agfl~~l~~g-~~l~~a~~~a~~~Aa~~v~~  350 (365)
T 3loo_A          320 VGGFLAQLLQS-RTVDVCIKCGIWAAREIIQR  350 (365)
T ss_dssp             HHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCC-CCHHHHHHHHHHHHHHHHcC
Confidence            99998889986 89999999999887776653

>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*

Probab=99.74  E-value=5.6e-17  Score=142.28  Aligned_cols=178  Identities=11%  Similarity=0.057  Sum_probs=119.7

Q ss_pred             CchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHh-cCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           22 EEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQ-LGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        22 ~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~-~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +...+.++.+|+++++ |+......+.+..+++.+++ .++++++||.+........+...++++ .+++|+||..|++.
T Consensus       172 ~~~~~~l~~~~~v~~~-g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~-~~dil~pN~~Ea~~  249 (383)
T 2abs_A          172 EDWTTFASGALIFYAT-AYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLL-HTNILFGNEEEFAH  249 (383)
T ss_dssp             TTHHHHTTTCCEEEEE-GGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHH-TCSEEEEEHHHHHH
T ss_pred             hhhHHHhhcCCEEEEe-eecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHh-hCCEEeCCHHHHHH
Confidence            3455667889999985 44211224677888999998 899999999752110000122345554 79999999999999


Q ss_pred             HHcCC-CCCCcC--CCCCCChHHHHHHHHHHHHh-------cCCEEEEe-cCcc-EEE-----cCcEEEEEecCCc---c
Q 026308          101 LSRAS-VGPTKG--VDSSHESMDAMEAARCLAEA-------SGAIVAVS-GAVD-IVT-----DGRRVVGAHNGVP---M  160 (240)
Q Consensus       101 L~g~~-~~~~~~--~~~~~~~~~~~~~a~~l~~~-------~~~~Vvit-G~~~-~i~-----~~~~~~~~~~~~~---~  160 (240)
                      |+|.. +.....  .....+.+++.+++++|.+.       +...||+| |..+ +++     ++++.+.++.++.   .
T Consensus       250 L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~  329 (383)
T 2abs_A          250 LAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEK  329 (383)
T ss_dssp             HHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGG
T ss_pred             HhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCC
Confidence            98853 200000  00000145677788888774       55678889 7655 445     5556666765433   4


Q ss_pred             CCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          161 MQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       161 ~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +.+++||||+|+|.+++.++++ .++.+|+++|+.+++.+..
T Consensus       330 vvDttGAGDaF~ag~~~~l~~g-~~l~~al~~A~a~aa~~v~  370 (383)
T 2abs_A          330 IVDTNGAGDAFVGGFLYALSQG-KTVKQCIMCGNACAQDVIQ  370 (383)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             cCcCCChHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHh
Confidence            6688999999999999999986 8999999999987776544

>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A

Probab=99.74  E-value=3.1e-17  Score=141.07  Aligned_cols=159  Identities=16%  Similarity=0.054  Sum_probs=117.7

Q ss_pred             hhhcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCccc---chHHHHHHhccCCeEEcCCHHHHHH
Q 026308           26 DFTPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGF---RLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~---~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.++.+|++++. |+ + ++...+.+..+++.+++.++++++||......-.   .....++++ ..+++|+||..|++.
T Consensus       126 ~~~~~~~~v~~s-g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l-~~~dil~~N~~E~~~  203 (330)
T 3iq0_A          126 NILKDCTHFHIM-GSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVL-ELTDIYMPSEGEVLL  203 (330)
T ss_dssp             GGGTTEEEEEEE-GGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHH-HTCSEECCBGGGTTT
T ss_pred             hHhccCCEEEEe-chhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHH-hhCCEEecCHHHHHH
Confidence            356788999986 54 3 3334566788889999999999999976321000   011234455 489999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      |+|.+              +..+++++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.
T Consensus       204 l~g~~--------------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~  269 (330)
T 3iq0_A          204 LSPHS--------------TPERAIAGFLEEGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIAC  269 (330)
T ss_dssp             TCSCS--------------SHHHHHHHHHHHTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred             HhCCC--------------CHHHHHHHHHHcCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHH
Confidence            98852              23456778887777778889 7665 45666677778766666678899999999999999


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHH
Q 026308          179 VAVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       179 la~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      +.++ .++.+|+++|+.+++.+.
T Consensus       270 l~~g-~~~~~a~~~A~~~aa~~v  291 (330)
T 3iq0_A          270 RQLG-FDAHRALQYANACGALAV  291 (330)
T ss_dssp             HHTT-CCHHHHHHHHHHHHHHHT
T ss_pred             HHcC-CCHHHHHHHHHHHHHHHH
Confidence            9986 899999999998766543

>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}

Probab=99.74  E-value=9.3e-17  Score=138.99  Aligned_cols=150  Identities=17%  Similarity=0.080  Sum_probs=115.0

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHH-HhccCCeEEcCCHHHHHHHHcC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLE-LVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~-~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      +.++.+|+++++ |..+    +.+..+++.+++.++++++||..     ++ +...+ +++ .+++|+||..|++.|+|.
T Consensus       153 ~~l~~~~~v~~~-~~~~----~~~~~~~~~a~~~g~~v~~Dp~~-----~~-~~~~~~ll~-~~dil~~N~~Ea~~l~g~  220 (343)
T 2rbc_A          153 EDIALFDAVLVD-VRWP----ELALDVLTVARALGKPAILDGDV-----AP-VETLEGLAP-AATHIVFSEPAATRLTGL  220 (343)
T ss_dssp             HHHTTCSEEEEC-SSSH----HHHHHHHHHHHHTTCCEEEEECS-----CC-HHHHHHHGG-GCSEEEEEHHHHHHHHCC
T ss_pred             hhhCCCCEEEEc-CCCH----HHHHHHHHHHHHCCCEEEEECCc-----cc-cccHHHHHh-cCCEEEeCHHHHHHHcCC
Confidence            456789999986 4321    45678888899999999999975     32 23345 664 899999999999999985


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcC-CEEEEe-cCcc-EEEcCc--EEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASG-AIVAVS-GAVD-IVTDGR--RVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~-~~Vvit-G~~~-~i~~~~--~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      +              ++.++++.|.+.+. ..||+| |..+ ++++++  +.++++..+..+.+++|+||+|+|.+++.+
T Consensus       221 ~--------------~~~~~~~~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l  286 (343)
T 2rbc_A          221 E--------------TVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAM  286 (343)
T ss_dssp             S--------------SHHHHHHHHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHH
T ss_pred             C--------------CHHHHHHHHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHH
Confidence            2              24466777887776 788999 7655 445655  677777665556788999999999999999


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHH
Q 026308          180 AVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       180 a~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +++ .++.+|+++|+.+++.+..
T Consensus       287 ~~g-~~~~~a~~~A~~~aa~~v~  308 (343)
T 2rbc_A          287 AEG-MQSRAAVRLSSVAAALKCT  308 (343)
T ss_dssp             HTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HcC-CCHHHHHHHHHHHHHHHhC
Confidence            986 8999999999987765544

>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.73  E-value=3.6e-17  Score=139.67  Aligned_cols=153  Identities=17%  Similarity=0.074  Sum_probs=111.5

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+++++++...+    .+.+   .+.+++.++++++||.+..      ....+++ ..+++|+||..|++.|+|.
T Consensus       135 ~~~~~~~~~v~~~~~~~----~~~~---~~~a~~~~~~v~~Dp~~~~------~~~~~ll-~~~dil~~N~~E~~~l~g~  200 (311)
T 1vm7_A          135 WNTLSESDILLLQNEIP----FETT---LECAKRFNGIVIFDPAPAQ------GINEEIF-QYLDYLTPNEKEIEALSKD  200 (311)
T ss_dssp             HHHHTTCSEEEECSSSC----HHHH---HHHHHHCCSEEEECCCSCT------TCCGGGG-GGCSEECCBHHHHHHHHHH
T ss_pred             hhhcccCCEEEEeCCCC----HHHH---HHHHHHcCCEEEEeCcchh------hhhHHHH-hhCCEEeCCHHHHHHHhCC
Confidence            34567899999863322    2222   2337788999999998721      1112345 3799999999999999986


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      +.         .+.+++.+.+++|.+++...|++| |..+ +++++++.+.++.++..+.+++|+||+|+|.+++.++++
T Consensus       201 ~~---------~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g  271 (311)
T 1vm7_A          201 FF---------GEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEG  271 (311)
T ss_dssp             HH---------SCCCCHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT
T ss_pred             CC---------CChhHHHHHHHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCC
Confidence            43         223456677888888777779999 7655 445666777777655556788999999999999999986


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAG  201 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~  201 (240)
                       .++.+|+++|+.+++.+.
T Consensus       272 -~~~~~a~~~A~~~aa~~v  289 (311)
T 1vm7_A          272 -KNPEEAVIFGTAAAAISV  289 (311)
T ss_dssp             -CCHHHHHHHHHHHHHHHT
T ss_pred             -CCHHHHHHHHHHHHHHHh
Confidence             899999999998766543

>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*

Probab=99.72  E-value=1e-16  Score=139.17  Aligned_cols=159  Identities=16%  Similarity=0.116  Sum_probs=115.5

Q ss_pred             hhhcccCcEEEecCCC--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc-cCCeEEcCCHHHHHHHH
Q 026308           26 DFTPHVRALYVNVGTL--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALS  102 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~-~~~~vitPN~~E~~~L~  102 (240)
                      +.++.++++++. |++  ++...+.+.++++.+++.++++++||..........+...++++ ..+++++||..|++.|+
T Consensus       167 ~~~~~~~~v~~~-G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~  245 (352)
T 4e3a_A          167 DVVADAKVTYFE-GYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLY  245 (352)
T ss_dssp             HHHHTEEEEEEE-GGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHT
T ss_pred             HHHhhCCEEEEe-eeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHh
Confidence            467789999986 552  44456778899999999999999999642110001122344553 27999999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHH
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFV  179 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~l  179 (240)
                      |..           +   ..++++.|.+ +...||+| |..+ +++++++.+.++..+.. +.+++||||+|+|.+.+.+
T Consensus       246 g~~-----------~---~~~a~~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l  310 (352)
T 4e3a_A          246 QTD-----------D---FEEALNRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGY  310 (352)
T ss_dssp             TCS-----------C---HHHHHHHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHH
T ss_pred             CCC-----------C---HHHHHHHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHH
Confidence            852           2   2345566655 45578888 7655 55677778888765543 5788999999999999999


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHH
Q 026308          180 AVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       180 a~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      ++| .++.+|+++|+.+++.+.
T Consensus       311 ~~g-~~l~~a~~~A~~aAa~~v  331 (352)
T 4e3a_A          311 TQG-RSLEDCGKLGCLAAGIVI  331 (352)
T ss_dssp             HTT-CCHHHHHHHHHHHHHHHT
T ss_pred             HcC-CCHHHHHHHHHHHHHHHH
Confidence            986 899999999998766543

>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}

Probab=99.72  E-value=1.5e-16  Score=136.80  Aligned_cols=162  Identities=15%  Similarity=0.043  Sum_probs=115.9

Q ss_pred             hhcccCcEEEecCC-CC-CChHHHHHHHHHHHHhcCCCEEEcccccCCcccch----HHHHHHhccCCeEEcCCHHHHHH
Q 026308           27 FTPHVRALYVNVGT-LS-ANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL----NACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        27 ~~~~~d~vvi~~G~-~~-~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~----~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      .++.+|++++. |+ +. +...+.+..+++.+++.++++++||.+........    ....+++ ..+++++||..|++.
T Consensus       135 ~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~E~~~  212 (332)
T 2qcv_A          135 YIRRSKLLLVS-GTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVA-EQSDIVIGTREEFDV  212 (332)
T ss_dssp             HHTTEEEEEEE-GGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHH-HHCSEEEEEHHHHHH
T ss_pred             HHccCCEEEEe-CccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHH-HhCCEEEccHHHHHH
Confidence            45688998886 55 32 22346678888889999999999998621110001    1223444 379999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcC-cEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDG-RRVVGAHNGVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~-~~~~~~~~~~~~~~~~~GaGD~lag~iaa  177 (240)
                      |+|...         .  ++..+.+++|.+++...|++| |..+ +++++ ++.++++..+....+++|+||+|+|.+++
T Consensus       213 l~g~~~---------~--~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~  281 (332)
T 2qcv_A          213 LENRTE---------K--GDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLY  281 (332)
T ss_dssp             HTTCSS---------C--CCHHHHHHHHTTSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHH
T ss_pred             HhCCCc---------C--CCHHHHHHHHHHcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHH
Confidence            998642         1  223466777877766778899 7655 44555 55667775555567889999999999999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++++ .++.+|+++|+.+++.+.+
T Consensus       282 ~l~~g-~~~~~a~~~A~~~aa~~v~  305 (332)
T 2qcv_A          282 ALISG-KGIETALKYGSASASIVVS  305 (332)
T ss_dssp             HHHTT-CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            99986 8999999999988776654

>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}

Probab=99.72  E-value=1.3e-16  Score=136.48  Aligned_cols=155  Identities=14%  Similarity=0.090  Sum_probs=110.6

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      +.++.+++++++...+    .+.+..+++.+++.++++++||.+..    .....++++ ..+++|+||..|++.|+|..
T Consensus       130 ~~~~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~~~~ll-~~~dil~~N~~E~~~l~g~~  200 (317)
T 2nwh_A          130 EAIIASDFLLCDANLP----EDTLTALGLIARACEKPLAAIAISPA----KAVKLKAAL-GDIDILFMNEAEARALTGET  200 (317)
T ss_dssp             HHHHHCSEEEEETTSC----HHHHHHHHHHHHHTTCCEEEECCSHH----HHGGGTTTG-GGCSEEEEEHHHHHHHHC--
T ss_pred             hHhccCCEEEEeCCCC----HHHHHHHHHHHHhcCCeEEEeCCCHH----HHHHHHHHh-hhCeEecCCHHHHHHHhCCC
Confidence            5677899999874322    36678888999999999999997521    011122344 37899999999999999852


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccE-EEcCc-EEEEEecCCccCCCccchhhHHHHHHHHHHhcC
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDI-VTDGR-RVVGAHNGVPMMQKITATGCSVTALIAAFVAVD  182 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~-i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~  182 (240)
                      .            +++.+++++|.+.+...|++| |..+. +++++ ..++++..+..+.+++|+||+|+|.+.+.+.++
T Consensus       201 ~------------~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g  268 (317)
T 2nwh_A          201 A------------ENVRDWPNILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEG  268 (317)
T ss_dssp             ---------------CTTHHHHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTT
T ss_pred             h------------hHHHHHHHHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcC
Confidence            1            123345667777666668888 76554 45544 456666555556788999999999999999986


Q ss_pred             CCCHHHHHHHHHHHHHHHHH
Q 026308          183 PLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       183 ~~~~~~A~~~A~~~~~~a~~  202 (240)
                       .++.+|+++|+.+.+.+..
T Consensus       269 -~~~~~a~~~A~~~aa~~v~  287 (317)
T 2nwh_A          269 -KTIREALRQGAAAAAITVQ  287 (317)
T ss_dssp             -CCHHHHHHHHHHHHHHHHS
T ss_pred             -CCHHHHHHHHHHHHHHHHc
Confidence             8999999999987765543

>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}

Probab=99.70  E-value=4.3e-16  Score=133.04  Aligned_cols=156  Identities=13%  Similarity=0.058  Sum_probs=108.7

Q ss_pred             hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308           24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      ..+.++.+|+++++ ++ ++   +....+++.+ +.+.++++||...+.. .......++++ .+++|+||..|++.|+|
T Consensus       113 ~~~~~~~~~~v~~~-~~-~~---~~~~~~~~~~-~~~~~v~~Dp~~~~~~-~~~~~~~~~l~-~~dil~~N~~E~~~l~g  184 (313)
T 3kd6_A          113 VPQYYRDSKFVCLG-NI-DP---ELQLKVLDQI-DDPKLVVCDTMNFWIE-GKPEELKKVLA-RVDVFIVNDSEARLLSG  184 (313)
T ss_dssp             CCGGGTTCSEEEEC-SS-CH---HHHHHHHTTC-SSCSEEEEECCHHHHH-HCHHHHHHHHT-TCSEEEEEHHHHHHHHS
T ss_pred             chHHHccCCEEEEc-CC-CH---HHHHHHHHHH-hhCCEEEEcChhhhhh-hhHHHHHHHHh-cCCEEEeCHHHHHHHhC
Confidence            34567789999984 33 32   3334555555 5678899999432110 01123445664 89999999999999998


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCc-cCCCccchhhHHHHHHHHHHh
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP-MMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~-~~~~~~GaGD~lag~iaa~la  180 (240)
                      .+              ++.+++++|.+.+...|++| |..+ +++++++.+.++..+. .+.+++||||+|+|.+++.++
T Consensus       185 ~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~  250 (313)
T 3kd6_A          185 DP--------------NLVKTARIIREMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLA  250 (313)
T ss_dssp             CS--------------CHHHHHHHHHTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHH
T ss_pred             CC--------------CHHHHHHHHHHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHH
Confidence            52              24567778887666678889 7655 5567777777776554 467889999999999998888


Q ss_pred             cCCC-----CHHHHHHHHHHHHHHHHH
Q 026308          181 VDPL-----HAFEATASALSVYGIAGE  202 (240)
Q Consensus       181 ~~~~-----~~~~A~~~A~~~~~~a~~  202 (240)
                      ++ .     ++.+|+++|+.+++.+.+
T Consensus       251 ~g-~~~~~~~l~~a~~~a~~~aa~~v~  276 (313)
T 3kd6_A          251 RC-GNTSEAEMRKAVLYGSAMASFCVE  276 (313)
T ss_dssp             HH-CCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             cC-CCccccCHHHHHHHHHHHHHHHHe
Confidence            85 5     677888888876655443

>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*

Probab=99.69  E-value=3.1e-15  Score=128.28  Aligned_cols=159  Identities=12%  Similarity=-0.006  Sum_probs=111.6

Q ss_pred             hhhcccCcEEEecCC-CCC-ChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308           26 DFTPHVRALYVNVGT-LSA-NWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~-~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      +.+..+++++++ |+ ..+ ...+.+..+++.+++.+ .+++|+..........+...++++ .+++++||..|++.|+|
T Consensus       131 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~~~l~g  207 (325)
T 3h49_A          131 ARFSQAKLLSLA-SIFNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETLDDICEALS-YVDYLFPNFAEAKLLTG  207 (325)
T ss_dssp             GGGGGCSEEEEE-EETTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHHHHT-TCSEEECBHHHHHHHHT
T ss_pred             hhhccCCEEEEe-cccCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHHHHHHHHHh-hCCEEecCHHHHHHHhC
Confidence            346788999886 43 221 12356788888898888 566765432111111223345663 79999999999999998


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCc-cCCCccchhhHHHHHHHHHHh
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVP-MMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~-~~~~~~GaGD~lag~iaa~la  180 (240)
                      .+           +   ..+.++.|.+.+...|++| |..+ +++++++.+.++..+. .+.+++||||+|+|.+.+.+.
T Consensus       208 ~~-----------~---~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~  273 (325)
T 3h49_A          208 KE-----------T---LDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALL  273 (325)
T ss_dssp             CS-----------S---HHHHHHHHHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHH
T ss_pred             CC-----------C---HHHHHHHHHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHH
Confidence            53           2   2345667777666778888 7755 4566677777775553 567889999999999998899


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++ .++.+|+++|+.+++.+..
T Consensus       274 ~g-~~~~~a~~~A~~~aa~~v~  294 (325)
T 3h49_A          274 EG-KNLRECARFANATAAISVL  294 (325)
T ss_dssp             TT-CCHHHHHHHHHHHHHHHHT
T ss_pred             cC-CCHHHHHHHHHHHHHHHHc
Confidence            86 8999999999987665544

>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*

Probab=99.69  E-value=1e-16  Score=138.16  Aligned_cols=160  Identities=10%  Similarity=-0.066  Sum_probs=105.2

Q ss_pred             hhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCC---c-ccchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           26 DFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGA---S-GFRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~---~-~~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.++.+|+++++.+.+ ++...+.+..+++.+++.++++++||.....   . ........+++ ..+++|+||..|++.
T Consensus       125 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~E~~~  203 (338)
T 3ljs_A          125 ASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGL-SLADVVKLSSEELDY  203 (338)
T ss_dssp             HHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHH-HTCSEEEEEHHHHHH
T ss_pred             hHhcCCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHH-hhCCEEEecHHHHHH
Confidence            3567889998875443 4445577888999999999999999964221   0 01112344566 389999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      |+|.+.         ...   .+++++|.+.+...||+| |..+ +++++++.++++..+..+.+++||||+|+|.+.+.
T Consensus       204 l~g~~~---------~~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~  271 (338)
T 3ljs_A          204 LANTLA---------ADA---NAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYT  271 (338)
T ss_dssp             HHHHHT---------SCH---HHHHHHHTTTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHH
T ss_pred             HhCCCC---------hhH---HHHHHHHHhcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHH
Confidence            998642         111   136777777666678888 7655 45666677777766556678899999999999988


Q ss_pred             HhcCC-------------CCHHHHHHHHHHHHH
Q 026308          179 VAVDP-------------LHAFEATASALSVYG  198 (240)
Q Consensus       179 la~~~-------------~~~~~A~~~A~~~~~  198 (240)
                      +++++             .++.+|+++|+.+++
T Consensus       272 l~~g~~~~~~~~~~~~~~~~l~~al~~A~~~aa  304 (338)
T 3ljs_A          272 FAQQFDDAAALIDFCHDPESIVSTLRFAAAVGA  304 (338)
T ss_dssp             HHHHCSSTHHHHHHHTCHHHHHHHHHHHHHHHG
T ss_pred             HHhCCCcccchhccccChHHHHHHHHHHHHHHH
Confidence            88741             467788888877544

>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0

Probab=99.68  E-value=2.4e-15  Score=128.44  Aligned_cols=159  Identities=12%  Similarity=-0.000  Sum_probs=112.0

Q ss_pred             hhhcccCcEEEecCC-CC-CChHHHHHHHHHHHHhcCCCEEEcccccCCc---ccc-hHHHHHHhccCCeEEcCCHHHHH
Q 026308           26 DFTPHVRALYVNVGT-LS-ANWLPSMKAAAQLASQLGKPWVLDPVAAGAS---GFR-LNACLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~-~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~---~~~-~~~~~~~~~~~~~vitPN~~E~~   99 (240)
                      +.++.+|++++. |+ +. +...+.+..+++.+++ +.++++||......   +.. .....+++ ..+++|+||..|++
T Consensus       131 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l-~~~dil~~N~~E~~  207 (319)
T 3pl2_A          131 DDVREADILWFT-LTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWAL-QHSTVAVGNKEECE  207 (319)
T ss_dssp             HHHHHCSEEEEE-GGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHH-TTCSEEEECHHHHH
T ss_pred             HHhccCCEEEEe-cccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHH-HhCCEEEcCHHHHH
Confidence            456789999986 44 32 2233445566665555 67899999632110   000 12234555 48999999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa  177 (240)
                      .|+|.+              +..+.+++|.+++...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.+.+
T Consensus       208 ~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~  273 (319)
T 3pl2_A          208 IAVGET--------------EPERAGRALLERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCH  273 (319)
T ss_dssp             HHHSCC--------------SHHHHHHHHHHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHH
T ss_pred             HHcCCC--------------CHHHHHHHHHhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHH
Confidence            999852              23456777887776778888 7765 4566667777876666667889999999999999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+.++ .++.+|+++|+.+++.+.+
T Consensus       274 ~l~~g-~~~~~a~~~A~~~aa~~v~  297 (319)
T 3pl2_A          274 GLLSE-WPLEKVLRFANTAGALVAS  297 (319)
T ss_dssp             HHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHcC-CCHHHHHHHHHHHHHHHHh
Confidence            89986 8999999999987665543

>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*

Probab=99.66  E-value=1e-16  Score=138.52  Aligned_cols=161  Identities=13%  Similarity=-0.012  Sum_probs=111.9

Q ss_pred             hhhcccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCC---cc-cchHHHHHHhccCCeEEcCCHHHHHH
Q 026308           26 DFTPHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGA---SG-FRLNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~---~~-~~~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      +.++.+|+++++... .++...+.+..+++.+++.++++++||.....   .. ...+...+++ ..+++++||..|++.
T Consensus       137 ~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll-~~~dil~~N~~Ea~~  215 (339)
T 1tyy_A          137 PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSA-ALASICKVSADELCQ  215 (339)
T ss_dssp             CCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHH-HHCSEEEEEHHHHHH
T ss_pred             hHhccCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHH-hhCCEEecCHHHHHH
Confidence            345678999986332 23334466788889999999999999975321   00 0011234455 379999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      |+|.+           +.   .+++++|.+.+...||+| |..+ +++++++.++++..+..+.+++|+||+|+|.+++.
T Consensus       216 l~g~~-----------~~---~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~  281 (339)
T 1tyy_A          216 LSGAS-----------HW---QDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFT  281 (339)
T ss_dssp             HHCCS-----------SG---GGGSSTTGGGTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHH
T ss_pred             HhCCC-----------CH---HHHHHHHHHcCCCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHH
Confidence            99853           11   234455655555668888 7655 45566667777765556678899999999999988


Q ss_pred             HhcC----CCCHHHHHHHHHHHHHHHH
Q 026308          179 VAVD----PLHAFEATASALSVYGIAG  201 (240)
Q Consensus       179 la~~----~~~~~~A~~~A~~~~~~a~  201 (240)
                      ++++    +.++.+|+++|+.+++.+.
T Consensus       282 l~~g~~~~~~~l~~a~~~A~a~aa~~v  308 (339)
T 1tyy_A          282 LSRANCWDHALLAEAISNANACGAMAV  308 (339)
T ss_dssp             HTTSSSCCHHHHHHHHHHHHHHHHHGG
T ss_pred             HHhccccccccHHHHHHHHHHHHHHHh
Confidence            8873    2578899999888765443

>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}

Probab=99.66  E-value=3.9e-17  Score=140.28  Aligned_cols=156  Identities=12%  Similarity=0.056  Sum_probs=106.6

Q ss_pred             hhhhcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCc----ccchHHHHHHhccCCeEEcCCHHHH
Q 026308           25 PDFTPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGAS----GFRLNACLELVQLKPTVIRGNASEI   98 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~----~~~~~~~~~~~~~~~~vitPN~~E~   98 (240)
                      .+.++.+|+++++ |+ + .+...+.+.++++.+++.++++++||......    ........++++ .+++++||..|+
T Consensus       139 ~~~~~~~~~v~~~-g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~  216 (327)
T 3hj6_A          139 FELIKRSKVFHLS-TFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIIS-RADFVKPSLDDA  216 (327)
T ss_dssp             HHHHC--CEEEEE-SHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHT-TCSEECCBHHHH
T ss_pred             HhHhccCCEEEEC-chHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHh-hCCEEecCHHHH
Confidence            3457789999986 54 2 22244677888899999999999999853210    001123455664 899999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHH
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIA  176 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ia  176 (240)
                      +.|+|...           .+   +.+++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.++
T Consensus       217 ~~l~g~~~-----------~~---~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~  282 (327)
T 3hj6_A          217 RHLFGPDS-----------PE---NYVKRYLELGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFI  282 (327)
T ss_dssp             HHHHTTSC-----------SS---GGGGGGTTTTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHH
T ss_pred             HHHhCCCC-----------HH---HHHHHHHhCCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHH
Confidence            99998631           11   23455665666678888 7765 456666777777666666788999999999999


Q ss_pred             HHHhcCCCCHHHHHHHHHHHH
Q 026308          177 AFVAVDPLHAFEATASALSVY  197 (240)
Q Consensus       177 a~la~~~~~~~~A~~~A~~~~  197 (240)
                      +.+.++ .++.+|+++|+.++
T Consensus       283 ~~l~~g-~~~~~a~~~A~a~a  302 (327)
T 3hj6_A          283 CGLLDG-YTVKRSIKLGNGVA  302 (327)
T ss_dssp             HTTSSC-STTHHHHHHHHCCC
T ss_pred             HHHHcC-CCHHHHHHHHHHHH
Confidence            888886 89999999888643

>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A

Probab=99.66  E-value=3e-15  Score=127.35  Aligned_cols=154  Identities=18%  Similarity=-0.028  Sum_probs=109.4

Q ss_pred             hhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc----hHHHHHHhccCCeEEcCCHHHH
Q 026308           26 DFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR----LNACLELVQLKPTVIRGNASEI   98 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~----~~~~~~~~~~~~~vitPN~~E~   98 (240)
                      +.++.+|+++++ |+ +  ++...+.+..+++.+++.++++++||.+.... +.    .+...+++ ..+++++||..|+
T Consensus       121 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~~~~~l-~~~dil~~N~~E~  197 (309)
T 1v1a_A          121 DYLEGVRFLHLS-GITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTL-WSPEEARGFLERAL-PGVDLLFLSEEEA  197 (309)
T ss_dssp             GGGTTCSEEEEE-TTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTT-SCHHHHHHHHHHHG-GGCSEEEEEHHHH
T ss_pred             hHhcCCCEEEEe-CchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCccc-CCHHHHHHHHHHHH-HhCCEEECcHHHH
Confidence            356789999885 54 2  23345677888899999999999999863211 11    11234455 3799999999999


Q ss_pred             HHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCccEEEcC-cEEEEEecCCccCCCccchhhHHHHHHH
Q 026308           99 IALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVDIVTDG-RRVVGAHNGVPMMQKITATGCSVTALIA  176 (240)
Q Consensus        99 ~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~~i~~~-~~~~~~~~~~~~~~~~~GaGD~lag~ia  176 (240)
                      +.|+|.           .  +   +.++   +.+...|++| |..+.++.+ ++.++++..+..+.+++|+||+|+|.+.
T Consensus       198 ~~l~g~-----------~--~---~~~~---~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~  258 (309)
T 1v1a_A          198 ELLFGR-----------V--E---EALR---ALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYL  258 (309)
T ss_dssp             HHHHSS-----------H--H---HHHH---HTCCSEEEEECGGGCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHH
T ss_pred             HHHhCC-----------H--H---HHHH---hcCCCEEEEEecCCCeeEecCCcEEEeCCCCCCcCCCCCchHHHHHHHH
Confidence            999973           1  1   2222   4455678888 765544343 5666776655556688999999999999


Q ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          177 AFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       177 a~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +.+.++ .++.+|+++|+.+++.+.+
T Consensus       259 ~~l~~g-~~~~~a~~~a~~~aa~~v~  283 (309)
T 1v1a_A          259 AGAVWG-LPVEERLRLANLLGASVAA  283 (309)
T ss_dssp             HHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            889986 8999999999987766544

>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A

Probab=99.65  E-value=1.3e-15  Score=129.31  Aligned_cols=147  Identities=13%  Similarity=0.010  Sum_probs=106.7

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP  108 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~  108 (240)
                      +.+|+++++.+.+     +.+..+++.+++.+ ++++||..... .+..+...++++ .+++++||..|++.|+|...  
T Consensus       129 ~~~~~v~~~~~~~-----~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~~~--  198 (302)
T 2c4e_A          129 FNTEIVHIATGDP-----EFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIE-HTNFLFMNKHEFERASNLLN--  198 (302)
T ss_dssp             CCEEEEEECSSCH-----HHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHH-TCSEEEEEHHHHHHHHHHHT--
T ss_pred             ccCCEEEEeCCCc-----HHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHh-cCCEEEcCHHHHHHHhCCCC--
Confidence            5678888864322     56778888899889 99999985211 111233455664 89999999999999998642  


Q ss_pred             CcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHHhcCCCC
Q 026308          109 TKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFVAVDPLH  185 (240)
Q Consensus       109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~~~~~  185 (240)
                             .+. .      +|.++ ...|++| |..+ +++++++.++++..+.. ..+++|+||+|+|.+.+.++++ .+
T Consensus       199 -------~~~-~------~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g-~~  262 (302)
T 2c4e_A          199 -------FEI-D------DYLER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKG-YD  262 (302)
T ss_dssp             -------CCH-H------HHHTT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTT-CC
T ss_pred             -------ccH-H------HHHhc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcC-CC
Confidence                   111 1      56666 6678889 6655 45566667777765555 6788999999999999999986 89


Q ss_pred             HHHHHHHHHHHHHHHH
Q 026308          186 AFEATASALSVYGIAG  201 (240)
Q Consensus       186 ~~~A~~~A~~~~~~a~  201 (240)
                      +.+|+++|+.+++.+.
T Consensus       263 ~~~a~~~a~~~aa~~~  278 (302)
T 2c4e_A          263 LEKCGLIGAATASFVV  278 (302)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999998766544

>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*

Probab=99.64  E-value=1.1e-15  Score=133.54  Aligned_cols=166  Identities=15%  Similarity=0.111  Sum_probs=112.9

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.++++++. |++.+...+.+.++++.+++.++++++|+.......+..+.+.++++ .+|+++||+.|++.|++.
T Consensus       175 ~~~i~~a~~~~~~-g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~-~~Dil~~Ne~Ea~~l~~~  252 (372)
T 3uq6_A          175 WSLVEKAQVYYIA-GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMIS-YSNIVFGNESEAEAYGEV  252 (372)
T ss_dssp             HHHHHHCSEEEEE-GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHT-TCSEEEEEHHHHHHHHHH
T ss_pred             HHHhhcccEEEEe-cccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhh-cCCcccCCHHHHHHHhCC
Confidence            3567789999986 66433335667788899999999999998753221222233455664 789999999999999986


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHh-------cCCEEEEe-cCccEE-EcCcE--EEE--EecCC-ccCCCccchhhH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEA-------SGAIVAVS-GAVDIV-TDGRR--VVG--AHNGV-PMMQKITATGCS  170 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~-------~~~~Vvit-G~~~~i-~~~~~--~~~--~~~~~-~~~~~~~GaGD~  170 (240)
                      ..         ...++..+.++.+.+.       ....||+| |..+.+ +++++  +..  +++.+ ..+.+++||||+
T Consensus       253 ~~---------~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDa  323 (372)
T 3uq6_A          253 HG---------LLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDA  323 (372)
T ss_dssp             TT---------CCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHH
T ss_pred             CC---------CchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHH
Confidence            42         2234555666666542       23458888 876644 44332  222  22222 245688999999


Q ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          171 VTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       171 lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      |+|.+.+.+.+| .++.+++++|+.+++.+++
T Consensus       324 F~agfl~~l~~g-~~l~~a~~~a~~aAa~vv~  354 (372)
T 3uq6_A          324 FAAGFIADYIRG-KPMITSLHAAVKAAAYIIC  354 (372)
T ss_dssp             HHHHHHHHHTTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            988887778886 8999999999987665544

>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*

Probab=99.63  E-value=4.4e-15  Score=127.89  Aligned_cols=150  Identities=12%  Similarity=-0.012  Sum_probs=106.2

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCC
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG  107 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~  107 (240)
                      ++.+|+++++ |..    .+.+..+++.+++.++++++||.+... .+..+...++++ .+++++||..|++.|+|... 
T Consensus       146 l~~~~~v~~~-~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~l~~~l~-~~dil~~N~~E~~~l~g~~~-  217 (334)
T 2pkf_A          146 IGKPELVIIG-AND----PEAMFLHTEECRKLGLAFAADPSQQLA-RLSGEEIRRLVN-GAAYLFTNDYEWDLLLSKTG-  217 (334)
T ss_dssp             HCSCSEEEEE-SCC----HHHHHHHHHHHHHHTCCEEEECGGGGG-TSCHHHHHTTTT-TCSEEEEEHHHHHHHHHHHC-
T ss_pred             hcCCCEEEEc-CCC----hHHHHHHHHHHHhcCCeEEEeccchhh-hhhHHHHHHHHh-cCCEEecCHHHHHHHhccCC-
Confidence            4688999986 332    255677888889899999999986321 011122344553 78999999999999998642 


Q ss_pred             CCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcE-EEEEecCCcc-CCCccchhhHHHHHHHHHHhcCC
Q 026308          108 PTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRR-VVGAHNGVPM-MQKITATGCSVTALIAAFVAVDP  183 (240)
Q Consensus       108 ~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~-~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~~~  183 (240)
                              .+.+       .+.+. ...|++| |..+ +++++++ .++++..+.. +.+++|+||+|+|.+.+.+.++ 
T Consensus       218 --------~~~~-------~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g-  280 (334)
T 2pkf_A          218 --------WSEA-------DVMAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAG-  280 (334)
T ss_dssp             --------CCHH-------HHHTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTT-
T ss_pred             --------CCHH-------HHHhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcC-
Confidence                    2222       23333 4568888 7655 4455555 6777755543 4688999999999999889986 


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q 026308          184 LHAFEATASALSVYGIAGE  202 (240)
Q Consensus       184 ~~~~~A~~~A~~~~~~a~~  202 (240)
                      .++.+|+++|+.+++.+.+
T Consensus       281 ~~~~~a~~~A~~~aa~~v~  299 (334)
T 2pkf_A          281 LGLERSAQLGSLVAVLVLE  299 (334)
T ss_dssp             CCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            8999999999987766544

>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*

Probab=99.62  E-value=8.4e-15  Score=125.76  Aligned_cols=149  Identities=12%  Similarity=0.031  Sum_probs=106.0

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP  108 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~  108 (240)
                      +.+|+++++ +..    .+.+.++++.+++.++++++||.+... .+..+..+++++ .+++++||..|++.|+|...  
T Consensus       134 ~~~~~v~~~-~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~~~~~l~-~~dil~~N~~Ea~~l~g~~~--  204 (326)
T 3b1n_A          134 KDIKLAIVG-PDG----FQGMVQHTEELAQAGVPFIFDPGQGLP-LFDGATLRRSIE-LATYIAVNDYEAKLVCDKTG--  204 (326)
T ss_dssp             CSCSEEEEC-SCC----HHHHHHHHHHHHHHTCCEEECCGGGGG-GCCHHHHHHHHH-HCSEEEEEHHHHHHHHHHHC--
T ss_pred             cCCCEEEEC-Ccc----HHHHHHHHHHHHHCCCEEEEeCchhhh-hccHHHHHHHHH-hCCEEecCHHHHHHHhCCCC--
Confidence            678888885 322    256677888889999999999976321 111233455664 68999999999999998542  


Q ss_pred             CcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCcc-CCCccchhhHHHHHHHHHHhcCCCC
Q 026308          109 TKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPM-MQKITATGCSVTALIAAFVAVDPLH  185 (240)
Q Consensus       109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~-~~~~~GaGD~lag~iaa~la~~~~~  185 (240)
                             .+.++       +.+. ...|++| |..+ +++++++.+.++..+.. +.+++|+||+|+|.+.+.+.++ .+
T Consensus       205 -------~~~~~-------l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g-~~  268 (326)
T 3b1n_A          205 -------WSEDE-------IASR-VQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHG-FD  268 (326)
T ss_dssp             -------CCHHH-------HHTT-SSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTT-CC
T ss_pred             -------CCHHH-------HHhc-CCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcC-CC
Confidence                   22222       3333 4568888 7655 45566677777755543 4588999999999999889886 89


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 026308          186 AFEATASALSVYGIAGE  202 (240)
Q Consensus       186 ~~~A~~~A~~~~~~a~~  202 (240)
                      +.+|+++|+.+++.+.+
T Consensus       269 ~~~a~~~A~~~aa~~v~  285 (326)
T 3b1n_A          269 WATAGRLASLMGALKIA  285 (326)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            99999999987765544

>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*

Probab=99.61  E-value=7.4e-15  Score=125.30  Aligned_cols=141  Identities=14%  Similarity=0.104  Sum_probs=106.3

Q ss_pred             hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHc
Q 026308           24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      +.+.++.+|+++++...+    .+.+..+++.+++.++++++||.+...  . .+..+++++ .+++++||..|++.|+|
T Consensus       137 ~~~~l~~~~~v~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~--~-~~~~~~ll~-~~dil~~N~~Ea~~l~g  208 (310)
T 3go6_A          137 VPSAVANCDVLLTQLEIP----VATALAAARAAQSADAVVMVNASPAGQ--D-RSSLQDLAA-IADVVIANEHEANDWPS  208 (310)
T ss_dssp             CTTTTTTCSEEEECSSSC----HHHHHHHHHHHHHTTCEEEEECCSSSC--C-HHHHHHHHH-HCSEEEEEHHHHHHSSS
T ss_pred             HHHHhhcCCEEEECCCCC----HHHHHHHHHHHHHcCCEEEEcCCcccc--c-hHHHHHHHh-hCCEEEeCHHHHHHHhC
Confidence            456678899999863322    366788888999999999999986321  1 223345653 79999999999999876


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      .                            ...|++| |..+ +++++++.+.++..+..+.+++||||+|+|.+.+.+.+
T Consensus       209 ~----------------------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~  260 (310)
T 3go6_A          209 P----------------------------PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPR  260 (310)
T ss_dssp             C----------------------------CSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCS
T ss_pred             C----------------------------CCEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHh
Confidence            1                            3468888 7655 45667777888766666678899999999999888887


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHH
Q 026308          182 ----DPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       182 ----~~~~~~~A~~~A~~~~~~a~  201 (240)
                          + .++.+|+++|+.+++.+.
T Consensus       261 ~~~~g-~~l~~a~~~A~~~aa~~v  283 (310)
T 3go6_A          261 NPGSP-AERLRALRRACAAGALAT  283 (310)
T ss_dssp             SSCCH-HHHHHHHHHHHHHHHHHT
T ss_pred             cccCC-CCHHHHHHHHHHHHHHHh
Confidence                6 688899999988766543

>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*

Probab=99.60  E-value=8.6e-15  Score=124.15  Aligned_cols=139  Identities=18%  Similarity=0.070  Sum_probs=105.2

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      .+.++.+|+++++ |..+   .+.+..+++.+++.++++++||....      ....+++ ..+++++||..|++.|+|.
T Consensus       126 ~~~~~~~~~v~~~-g~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll-~~~dil~~N~~E~~~l~g~  194 (299)
T 3ikh_A          126 MADAVAGDILLQQ-GNFS---LDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLW-PLIDIAVVNESEAELLQPY  194 (299)
T ss_dssp             GTTCCTTCEEEEC-SCSC---HHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCG-GGCSEEEEEHHHHHHHCCC
T ss_pred             HhhhccCCEEEEC-CCCC---HHHHHHHHHHHHHcCCEEEEccccch------hhHHHHH-hhCCEEEecHHHHHHHhcC
Confidence            3456788999986 4333   35678888899999999999997621      1123444 4799999999999998751


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHH-HHHHHHhc
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTA-LIAAFVAV  181 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag-~iaa~la~  181 (240)
                                                 +...|++| |..+ +++++++.+.++..+..+.+++|+||+|+| .+++.+.+
T Consensus       195 ---------------------------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~  247 (299)
T 3ikh_A          195 ---------------------------GVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLR  247 (299)
T ss_dssp             ---------------------------SCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHT
T ss_pred             ---------------------------CCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHc
Confidence                                       23468888 7655 456666777777666666788999999999 99988988


Q ss_pred             CCCCHHH-HHHHHHHHHHHHHH
Q 026308          182 DPLHAFE-ATASALSVYGIAGE  202 (240)
Q Consensus       182 ~~~~~~~-A~~~A~~~~~~a~~  202 (240)
                      + .++.+ |+++|+.+++.+.+
T Consensus       248 g-~~~~~~a~~~a~~~aa~~v~  268 (299)
T 3ikh_A          248 G-VAPDALALAHASRAAAITVS  268 (299)
T ss_dssp             T-SSSCHHHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHHHhC
Confidence            6 89999 99999987776554

>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1

Probab=99.60  E-value=8e-15  Score=124.30  Aligned_cols=152  Identities=15%  Similarity=0.047  Sum_probs=104.9

Q ss_pred             cccCcEEEecCC-CCCChHHHHHHHHHHHHhcCCCEEEcccccCC----cccc---hHHHHHHhccCCeEEcCCHHHHHH
Q 026308           29 PHVRALYVNVGT-LSANWLPSMKAAAQLASQLGKPWVLDPVAAGA----SGFR---LNACLELVQLKPTVIRGNASEIIA  100 (240)
Q Consensus        29 ~~~d~vvi~~G~-~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~----~~~~---~~~~~~~~~~~~~vitPN~~E~~~  100 (240)
                      ..+++++++ ++ +.+..    ..+++.+++.++++++||.+.-.    ..++   .+...++++ .+++++||..|++.
T Consensus       118 ~~~~~v~~~-~~~~~~~~----~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~-~~dil~~N~~E~~~  191 (298)
T 1vk4_A          118 IEGEAVHIN-PLWYGEFP----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK-YLDLFKVDSREAET  191 (298)
T ss_dssp             CCSSEEEEC-CSSTTSSC----GGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG-GCSEEEEEHHHHHH
T ss_pred             CCCCEEEEC-Cccccccc----HHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcc-cCCEEecCHHHHHH
Confidence            467888875 44 32221    34566677889999999975100    0010   012345664 79999999999999


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV  179 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~l  179 (240)
                      |+|.+              ++.++++.|.+.+...||+|...+ +++++ +.+.++.++..+.+++|+||+|+|.+.+.+
T Consensus       192 l~g~~--------------~~~~~~~~l~~~g~~~vvvT~~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l  256 (298)
T 1vk4_A          192 LTGTN--------------DLRESCRIIRSFGAKIILATHASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGF  256 (298)
T ss_dssp             HHSCS--------------CHHHHHHHHHHTTCSSEEEEETTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHH
T ss_pred             HhCCC--------------CHHHHHHHHHhcCCCEEEEEcCCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHH
Confidence            99852              244566777776656688886323 45555 666777655556688999999999999889


Q ss_pred             hc-CCCCHHHHHHHHHHHHHHHHH
Q 026308          180 AV-DPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       180 a~-~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+ + .++.+|+++|+.+++.+.+
T Consensus       257 ~~~g-~~~~~a~~~A~a~aa~~v~  279 (298)
T 1vk4_A          257 VFKK-MSIEKATKFAAAVTSVKMR  279 (298)
T ss_dssp             HTSC-CCHHHHHHHHHHHHHHHTT
T ss_pred             HHcC-CCHHHHHHHHHHHHHHHHc
Confidence            88 7 8999999999987665543

>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*

Probab=99.57  E-value=2e-14  Score=122.46  Aligned_cols=156  Identities=15%  Similarity=0.087  Sum_probs=106.4

Q ss_pred             hhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCc---ccc-hHHHHHHhccCCe--EEcCCHH
Q 026308           26 DFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGAS---GFR-LNACLELVQLKPT--VIRGNAS   96 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~---~~~-~~~~~~~~~~~~~--vitPN~~   96 (240)
                      +.++.+|+++++ |+ +  ++...+.+..+++.+++.    ++||......   ... .+...++++ .++  +++||..
T Consensus       124 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~-~~d~~il~~N~~  197 (313)
T 2v78_A          124 NYVRNSRLVHST-GITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILK-KYDIEVLITDPD  197 (313)
T ss_dssp             HHHHTSSEEEEE-HHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHH-HSCEEEEEECHH
T ss_pred             HHhcCCCEEEEc-CchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHH-hcCeeEEECcHH
Confidence            346788999885 43 2  222334555666655443    8999753110   000 112344553 789  9999999


Q ss_pred             HHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308           97 EIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTAL  174 (240)
Q Consensus        97 E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~  174 (240)
                      |++.|+|..              ++.+++++|.+.+...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.
T Consensus       198 E~~~l~g~~--------------~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag  263 (313)
T 2v78_A          198 DTKILLDVT--------------DPDEAYRKYKELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGT  263 (313)
T ss_dssp             HHHHHHSCC--------------CHHHHHHHHHHTTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHH
T ss_pred             HHHHHhCCC--------------CHHHHHHHHHhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHH
Confidence            999999852              23356777777555568888 7655 4456667777776655567889999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          175 IAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       175 iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      +.+.+.++ .++.+|+++|+.+++.+.+
T Consensus       264 ~~~~l~~g-~~~~~a~~~a~~~aa~~v~  290 (313)
T 2v78_A          264 FVSLYLQG-KDIEYSLAHGIAASTLVIT  290 (313)
T ss_dssp             HHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcC-CCHHHHHHHHHHHHHHHhc
Confidence            99889986 8999999999987766544

>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*

Probab=99.56  E-value=1.7e-14  Score=122.74  Aligned_cols=153  Identities=14%  Similarity=0.127  Sum_probs=105.7

Q ss_pred             hhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccch----HHHHHHhcc--CCeEEcCCHH
Q 026308           26 DFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL----NACLELVQL--KPTVIRGNAS   96 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~----~~~~~~~~~--~~~vitPN~~   96 (240)
                      +.++.+|+++++ |+ +  ++...+.+.++++.+++.    ++||...... +..    ....+++ .  .+++++||..
T Consensus       124 ~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~-~~~~~~~~~~~~~l-~~~~~dil~~N~~  196 (311)
T 2dcn_A          124 EYVKSADLVHSS-GITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKL-WSAEEAKREILKLL-SKFHLKFLITDTD  196 (311)
T ss_dssp             HHHTTCSEEEEE-HHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTT-SCHHHHHHHHHHHH-HHCCEEEEEEEHH
T ss_pred             HHHcCCCEEEEe-CcccccChHHHHHHHHHHHHHHHh----CcCccCchhh-CChHHHHHHHHHHH-hhcCCcEEECCHH
Confidence            346788999885 43 2  222345556666665544    8999763210 111    1233455 4  7899999999


Q ss_pred             HHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHH
Q 026308           97 EIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTAL  174 (240)
Q Consensus        97 E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~  174 (240)
                      |++.|+|..              ++.+++++|.+. ...|++| |..+ +++++++.++++..+..+.+++|+||+|+|.
T Consensus       197 E~~~l~g~~--------------~~~~~~~~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~  261 (311)
T 2dcn_A          197 DSKIILGES--------------DPDKAAKAFSDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGT  261 (311)
T ss_dssp             HHHHHHSCC--------------CHHHHHHHHTTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHH
T ss_pred             HHHHHhCCC--------------CHHHHHHHHHHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHH
Confidence            999999852              233566777765 4558888 7765 4456667777776665567889999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 026308          175 IAAFVAVDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       175 iaa~la~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      +.+.+.++ .++.+|+++|+.+++.+.
T Consensus       262 ~~~~l~~g-~~~~~a~~~a~~~aa~~v  287 (311)
T 2dcn_A          262 FLSLYYKG-FEMEKALDYAIVASTLNV  287 (311)
T ss_dssp             HHHHHTTT-CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcC-CCHHHHHHHHHHHHHHHh
Confidence            99889986 899999999998766543

>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}

Probab=99.53  E-value=7.7e-14  Score=120.71  Aligned_cols=183  Identities=14%  Similarity=0.065  Sum_probs=111.1

Q ss_pred             hhhhhcccCcEEEecCC-C--CCChHHHHHHHHHHHHhcCCCEEEcccccCC--cc-cchHHHHHHhccCCeEEcCCHHH
Q 026308           24 IPDFTPHVRALYVNVGT-L--SANWLPSMKAAAQLASQLGKPWVLDPVAAGA--SG-FRLNACLELVQLKPTVIRGNASE   97 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~-~--~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~--~~-~~~~~~~~~~~~~~~vitPN~~E   97 (240)
                      +.+.++.++++.++ |+ +  ++...+.+.++++.+++.++++++||.....  .. .......+++ ..+|+++||..|
T Consensus       144 ~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l-~~~dil~~N~~E  221 (351)
T 4gm6_A          144 LSELLKGIRVLHVS-GITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLL-PLVDYCSAGQMD  221 (351)
T ss_dssp             HHHHHTTEEEEEEE-HHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHG-GGCSEEECCHHH
T ss_pred             HHHHHhhcccceec-ccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHH-HhCCccccCHHH
Confidence            45677888998885 43 2  3444567788999999999999999953211  00 0011234455 379999999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhc-----CCEEEEe-cC---ccEEEcCcEEEEEecCC-ccCCCccch
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEAS-----GAIVAVS-GA---VDIVTDGRRVVGAHNGV-PMMQKITAT  167 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~-----~~~Vvit-G~---~~~i~~~~~~~~~~~~~-~~~~~~~Ga  167 (240)
                      ++.|+|...         +. .+..+.........     ...++++ +.   ...++..++.+..++.+ ..+.+++||
T Consensus       222 a~~l~g~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGA  291 (351)
T 4gm6_A          222 AVAFFEISS---------ET-TDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGG  291 (351)
T ss_dssp             HHHTSCCCT---------TC-SCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTH
T ss_pred             HHHHhCCCC---------ch-hHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCCh
Confidence            999998653         11 22222222211111     1112222 22   23445555555554333 346688999


Q ss_pred             hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCC--ccccHHHHHHHHhc
Q 026308          168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKG--PASLRMHMIDCLHG  224 (240)
Q Consensus       168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~--~g~~~~~~~~~l~~  224 (240)
                      ||+|.|.+...+.++ .++.+|+++|+.+.+.+.    .+ .|  +....+++.+.+.+
T Consensus       292 GDaF~ag~l~~l~~g-~~~~~al~~A~aaaal~v----~~-~Ga~~~~~~~ev~~~l~~  344 (351)
T 4gm6_A          292 GDAYTAAVLHGILSE-WRPDETVKFATAAAGLKH----SI-HGDINPFDEKTIADFAAD  344 (351)
T ss_dssp             HHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHT----TS-SSSSCCCCHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHh----CC-CCCCCCCCHHHHHHHHhC
Confidence            999988888778885 899999999988655433    32 33  23344555555543

>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A

Probab=99.53  E-value=1.5e-13  Score=117.09  Aligned_cols=147  Identities=12%  Similarity=0.024  Sum_probs=101.9

Q ss_pred             hcccCcEEEecCCCCCChHHHHHHHHHHHHhc--------CCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHH
Q 026308           28 TPHVRALYVNVGTLSANWLPSMKAAAQLASQL--------GKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        28 ~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~--------~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~   99 (240)
                      ++.+|+++++ |..    .+.+..+++.+++.        ++++++||...     + +...++++ .+++|+||..|++
T Consensus       144 l~~~~~v~~~-~~~----~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~-----~-~~~~~~l~-~~dil~~n~~ea~  211 (312)
T 2hlz_A          144 LTQFKWIHIE-GRN----ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP-----R-EELFQLFG-YGDVVFVSKDVAK  211 (312)
T ss_dssp             GGGEEEEEEE-CSS----HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC-----C-GGGGGGGG-SSSEEEECHHHHH
T ss_pred             hccCCEEEEe-ccC----HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc-----h-HHHHHHHh-cCCEEEEcHHHHH
Confidence            4678899986 442    24456667777766        67899998752     1 12234553 7899999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcC--CEEEEe-cCcc-EEEcC-cEEEEEecC-CccCCCccchhhHHHH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASG--AIVAVS-GAVD-IVTDG-RRVVGAHNG-VPMMQKITATGCSVTA  173 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~--~~Vvit-G~~~-~i~~~-~~~~~~~~~-~~~~~~~~GaGD~lag  173 (240)
                      .| |.           .+.   .+.++.+.+.+.  ..|++| |..+ ++++. +..+.++.. ...+.+++|+||+|+|
T Consensus       212 ~l-g~-----------~~~---~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a  276 (312)
T 2hlz_A          212 HL-GF-----------QSA---EEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNA  276 (312)
T ss_dssp             HT-TC-----------CSH---HHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHH
T ss_pred             Hc-CC-----------CCH---HHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHH
Confidence            87 53           122   345556666554  578888 7655 44543 446666652 3346688999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          174 LIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       174 ~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+.+.+.++ .++.+|+++|+.+.+.+..
T Consensus       277 ~~~~~l~~g-~~~~~a~~~a~~~aa~~v~  304 (312)
T 2hlz_A          277 SVIFSLSQG-RSVQEALRFGCQVAGKKCG  304 (312)
T ss_dssp             HHHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHHHHHh
Confidence            999889986 8999999999987665543

>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*

Probab=99.53  E-value=1.5e-13  Score=117.09  Aligned_cols=149  Identities=12%  Similarity=0.073  Sum_probs=105.2

Q ss_pred             hhhcccCcEEEecCC-C-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccc--h----HHHHHHhccCCeEEcCCHHH
Q 026308           26 DFTPHVRALYVNVGT-L-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFR--L----NACLELVQLKPTVIRGNASE   97 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~-~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~--~----~~~~~~~~~~~~vitPN~~E   97 (240)
                      +.++.++++.++ |+ + .+...+.+..+++.++ .++++++||..... .+.  .    ....+++ ..+++++||..|
T Consensus       120 ~~l~~~~~~~~~-g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~-~~~~~~~~~~~~~~~~l-~~~di~~~N~~E  195 (313)
T 3ewm_A          120 DIVEEAKIVNFG-SVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLD-LWRGQEEEMIKVLEESI-KLADIVKASEEE  195 (313)
T ss_dssp             HHHHHCSEEEEE-SGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGG-GGTTCHHHHHHHHHHHH-HHCSEEEEEHHH
T ss_pred             HHhCCCCEEEEc-CcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChH-HcCCCHHHHHHHHHHHH-hhCCEEecCHHH
Confidence            356678998886 55 3 3344567788888887 46899999975221 011  0    1234455 378999999999


Q ss_pred             HHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHH
Q 026308           98 IIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALI  175 (240)
Q Consensus        98 ~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~i  175 (240)
                      ++.|++...         ..             .....||+| |..+ +++++++.+.++..+..+.+++|+||+|+|.+
T Consensus       196 ~~~l~~~~~---------~~-------------~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~  253 (313)
T 3ewm_A          196 VLYLENQGV---------EV-------------KGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAAL  253 (313)
T ss_dssp             HHHHHTTTC---------CC-------------CCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred             HHHHhccCc---------cc-------------cCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHH
Confidence            999998643         10             113447888 7655 45667777888876666778899999999999


Q ss_pred             HHHHh--cCCCCHHHHHHHHHHHHHHHH
Q 026308          176 AAFVA--VDPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       176 aa~la--~~~~~~~~A~~~A~~~~~~a~  201 (240)
                      .+.++  ++ .++.+|+++|+.+++.+.
T Consensus       254 ~~~l~~~~g-~~l~~a~~~A~~~aa~~v  280 (313)
T 3ewm_A          254 LVGILKLKG-LDLLKLGKFANLVAALST  280 (313)
T ss_dssp             HHHHHHSSS-CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhcCC-CCHHHHHHHHHHHHHHHH
Confidence            88887  75 899999999988766443

>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}

Probab=99.44  E-value=3.8e-13  Score=114.45  Aligned_cols=138  Identities=9%  Similarity=-0.059  Sum_probs=96.2

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP  108 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~  108 (240)
                      +.+|+++++.. .      .+.++++.+++   ++++||.+.-. .+..+...++++ .+++++||..|++.|+|...  
T Consensus       139 ~~~~~v~~~~~-~------~~~~~~~~a~~---~v~~D~~~~~~-~~~~~~~~~~l~-~~dil~~N~~E~~~l~g~~~--  204 (306)
T 3bf5_A          139 DEYEYVHFSTG-P------NYLDMAKSIRS---KIIFDPSQEIH-KYSKDELKKFHE-ISYMSIFNDHEYRVFREMTG--  204 (306)
T ss_dssp             SCEEEEEECSS-S------SHHHHHHHCCS---EEEECCGGGGG-GSCHHHHHHHHH-HCSEEEEEHHHHHHHHHHHC--
T ss_pred             CCCCEEEECCh-H------HHHHHHHHhCC---cEEEcCchhhh-hccHHHHHHHHh-cCCEEEcCHHHHHHHhCCCC--
Confidence            56788888633 2      23556665554   89999985211 111223445663 78999999999999998642  


Q ss_pred             CcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCH
Q 026308          109 TKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHA  186 (240)
Q Consensus       109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~  186 (240)
                             .+..       ++      .|++| |..+ +++++++.+.++..+.. .+++|+||+|+|.+.+.+.++ .++
T Consensus       205 -------~~~~-------~l------~vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g-~~~  262 (306)
T 3bf5_A          205 -------LSSP-------KV------TTIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNR-RSI  262 (306)
T ss_dssp             -------CSSC-------SS------CEEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTT-CCH
T ss_pred             -------cCcc-------cE------EEEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcC-CCH
Confidence                   1111       11      17778 7765 44566677777766656 788999999999999888886 899


Q ss_pred             HHHHHHHHHHHHHHHH
Q 026308          187 FEATASALSVYGIAGE  202 (240)
Q Consensus       187 ~~A~~~A~~~~~~a~~  202 (240)
                      .+|+++|+.+++.+.+
T Consensus       263 ~~a~~~A~~~aa~~v~  278 (306)
T 3bf5_A          263 EKGMIYGTIIAHHVID  278 (306)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999988776654

>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A

Probab=92.55  E-value=2.1  Score=37.96  Aligned_cols=104  Identities=8%  Similarity=-0.026  Sum_probs=58.3

Q ss_pred             hhcccCcEEEecCC--CCC-----Ch-HHHH---HHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCH
Q 026308           27 FTPHVRALYVNVGT--LSA-----NW-LPSM---KAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNA   95 (240)
Q Consensus        27 ~~~~~d~vvi~~G~--~~~-----~~-~~~~---~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~   95 (240)
                      ..+..|.+|++ |+  +.+     +. .+.+   ...++..+..++++-+--.......++......++ +.+|.|=-|+
T Consensus       233 ~~~~~d~~vLS-Glq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~-p~vDSlGmNE  310 (474)
T 3drw_A          233 IGKEVDGAIFS-GYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNIL-PFVDSVGIDE  310 (474)
T ss_dssp             HHHHCSEEEEC-CGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTG-GGSSEEEEEH
T ss_pred             hhcCCCEEEEe-ccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhc-ccccccccCH
Confidence            33468999995 76  443     22 2223   34455556678888874433221112222233344 5799999999


Q ss_pred             HHHHHHHcCCCCCCc---CCCCCCChHHHHHHHHHHHHhcC
Q 026308           96 SEIIALSRASVGPTK---GVDSSHESMDAMEAARCLAEASG  133 (240)
Q Consensus        96 ~E~~~L~g~~~~~~~---~~~~~~~~~~~~~~a~~l~~~~~  133 (240)
                      .|+..+++.-. ..+   .+......+++.+++..|.++++
T Consensus       311 qELa~l~~~lg-~~~~s~~~~~~~~i~~v~e~~~~ll~~~~  350 (474)
T 3drw_A          311 AEIAQILSVLG-YRELADRIFTYNRLEDSILGGMIILDELN  350 (474)
T ss_dssp             HHHHHHHHHHT-CHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhc-CCccchhhhcCCCHHHHHHHHHHHHHHcC
Confidence            99999987411 000   00001245677788888887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	240
d1v8aa_	264	c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kin	4e-64
d1ekqa_	269	c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kin	1e-63
d1kyha_	275	c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus	1e-05
d2ax3a1	278	c.72.1.4 (A:212-489) Hypothetical protein TM0922,	2e-04

>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 264

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  198 bits (505), Expect = 4e-64
 Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 2/236 (0%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
           M+  AN LL+ GASP M H  EE+ +      A+ +N+GTL + W  SM  A ++A++LG
Sbjct: 27  MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELG 86

Query: 61  KPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMD 120
           KP VLDPV AGA+ FR    LE++     V++GN  EI AL              +   +
Sbjct: 87  KPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGEEGKTRGVDSLEYGEEE 146

Query: 121 AMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA 180
           A +     A      VAV+GAVD V+DGRR    +NG  ++ ++T TGC V AL  AFVA
Sbjct: 147 AKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAFVA 206

Query: 181 VDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNI 236
           V      +AT SAL  +GIA E     AK P S  + + D L+ +++  + +   +
Sbjct: 207 VT--EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKV 260

>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} Length = 269

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK)
species: Bacillus subtilis [TaxId: 1423]

 Score =  197 bits (501), Expect = 1e-63
 Identities = 77/239 (32%), Positives = 130/239 (54%), Gaps = 4/239 (1%)

Query: 1   MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLG 60
            +  AN LL+ GASP M +  EE+ D      AL +N+GTLS   + +M  A + A++ G
Sbjct: 29  TNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHG 88

Query: 61  KPWVLDPVAAGASGFRLNACLELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESM 119
            P +LDPV AGA+ FR  +  ++++ ++   IRGNA+EI      +    KGVD+     
Sbjct: 89  VPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGG 148

Query: 120 DAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFV 179
           D +  A+  A+    ++A++G VD++ D   V   HNG  ++ K+T  GC +T+++ AF 
Sbjct: 149 DIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFC 208

Query: 180 AVDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCLHGLDQAALLSRTNI 236
           AV   +   A  +A+S YG+A ++       KGP S ++ +++ L  + +  +     I
Sbjct: 209 AV-EENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATI 266

>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} Length = 275

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: YjeF C-terminal domain-like
domain: Hypothetical protein YxkO
species: Bacillus subtilis [TaxId: 1423]

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 24/175 (13%), Positives = 47/175 (26%), Gaps = 1/175 (0%)

Query: 48  SMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVG 107
           + +A A          V   V    +             K T  +     I+        
Sbjct: 94  TYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKREGPVILTPHPGEFF 153

Query: 108 PTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITAT 167
              GV  +       E A+  A     ++ + G   ++         +           T
Sbjct: 154 RMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGT 213

Query: 168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCL 222
           G ++T +I   +         A  +A+ ++G   E+          L   + D L
Sbjct: 214 GDTLTGMILGMLCCH-EDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDIL 267

>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 278

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: YjeF C-terminal domain-like
domain: Hypothetical protein TM0922, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 116 HESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALI 175
            +     E A   A+ +  ++ +  A  IVTDG + +    G   + K   +G  +T +I
Sbjct: 168 GDVKYNYELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSKG-GSGDVLTGMI 226

Query: 176 AAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLH 223
           A F+A   L   EA+  ++ ++G A E  +            ++  + 
Sbjct: 227 AGFIAQG-LSPLEASTVSVYLHGFAAE--LFEQDERGLTASELLRLIP 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	240
d1ekqa_	269	Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba	100.0
d1v8aa_	264	Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar	100.0
d1kyha_	275	Hypothetical protein YxkO {Bacillus subtilis [TaxI	99.95
d2ax3a1	278	Hypothetical protein TM0922, C-terminal domain {Th	99.95
d1ub0a_	258	4-amino-5-hydroxymethyl-2-methylpyrimidine phospha	99.89
d1jxha_	266	4-amino-5-hydroxymethyl-2-methylpyrimidine phospha	99.88
d1vi9a_	288	Pyridoxamine kinase {Escherichia coli [TaxId: 562]	99.87
d1lhpa_	309	Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]	99.83
d2ajra1	319	Putative sugar kinase TM0828 {Thermotoga maritima	99.73
d2f02a1	313	Tagatose-6-phosphate kinase LacC {Enterococcus fae	99.73
d2abqa1	306	Fructose 1-phosphate kinase FruB {Bacillus halodur	99.72
d2afba1	333	2-keto-3-deoxygluconate kinase {Thermotoga maritim	99.46
d1bx4a_	342	Adenosine kinase {Human (Homo sapiens) [TaxId: 960	99.39
d1rkda_	306	Ribokinase {Escherichia coli [TaxId: 562]}	99.38
d1vk4a_	288	Hypothetical protein TM0415 {Thermotoga maritima [	99.36
d1v19a_	302	2-keto-3-deoxygluconate kinase {Thermus thermophil	99.27
d1vm7a_	299	Ribokinase {Thermotoga maritima [TaxId: 2336]}	99.21
d2absa1	350	Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}	99.16
d2fv7a1	308	Ribokinase {Human (Homo sapiens) [TaxId: 9606]}	99.1
d2dcna1	308	Hypothetical fructokinase ST2478 {Sulfolobus tokod	99.08
d1tyya_	304	Aminoimidazole riboside kinase {Salmonella typhimu	98.97

>d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK)
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=2.7e-48  Score=322.33  Aligned_cols=238  Identities=32%  Similarity=0.533  Sum_probs=209.4

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      +|++||++|++|++|+|+++++|++++.+.+|+++|++|++++.+.+.+...++.+++.++|+||||++.+.+.+|.+..
T Consensus        29 ~n~~AN~~La~GasPiMa~~~~E~~e~~~~a~alviN~Gtl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvgas~~R~~~~  108 (269)
T d1ekqa_          29 TNFTANGLLALGASPVMAYAKEEVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESA  108 (269)
T ss_dssp             HHHHHHHHHHHTCEEECCCCTTTHHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHH
T ss_pred             HHHHHHHHHHcCCCccccCCHHHHHHHHHhccceEEecCCCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCCchhHHHHH
Confidence            47999999999999999999999999999999999999999888888889999999999999999999999888888777


Q ss_pred             HHHhc-cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQ-LKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~-~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      +++++ .+++|||||..|++.|+|......+|+|...+.++..+.+++|+++++++|++||..|+++++++++.++.+.+
T Consensus       109 ~~ll~~~~~tVI~gN~~Ei~~L~g~~~~~~~gvd~~~~~~d~~~~A~~la~~~~~vVvlkG~~D~I~dg~~~~~~~~G~~  188 (269)
T d1ekqa_         109 RDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHK  188 (269)
T ss_dssp             HHHHHHSCCSEEEECHHHHHHHCC---------------HHHHHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCCG
T ss_pred             HHHHHhCCCceEcCCHHHHHHHhCCccCCcCCcCCcccHHHHHHHHHHHHHhcCCEEEecCCceEEEeCCeeEEecCCCh
Confidence            78776 58999999999999999864323355665456678899999999999999999999999999999999998889


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhC--CCccccHHHHHHHHhcCCHHHHhcccccc
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMA--KGPASLRMHMIDCLHGLDQAALLSRTNIT  237 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~--~~~g~~~~~~~~~l~~~~~~~~~~~~~~~  237 (240)
                      .+.+++|+||+|+|+|++|++++ .++++|+..|+.+++.|++.+.++.  .|+|+|...++|+|+.+..+++.+++|+|
T Consensus       189 ~m~~itGtGc~Ls~~iaa~la~~-~~~~~A~~~A~~~~~~Age~Aa~~~~~~GpGsf~~~llD~L~~l~~~~~~~~~~ve  267 (269)
T d1ekqa_         189 LLTKVTGAGCLLTSVVGAFCAVE-ENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLSTVTEQDVQEWATIE  267 (269)
T ss_dssp             GGGGSTTHHHHHHHHHHHHHTTC-SSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCCHHHHHHHCCEE
T ss_pred             hhccCCcchHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHhcCCHHHHHhhCCEe
Confidence            99988999999999999999996 7999999999999999999998763  58899999999999999999999999999


Q ss_pred             cc
Q 026308          238 AL  239 (240)
Q Consensus       238 ~~  239 (240)
                      +|
T Consensus       268 ~~  269 (269)
T d1ekqa_         268 RV  269 (269)
T ss_dssp             EC
T ss_pred             eC
Confidence            86

>d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=2e-47  Score=316.54  Aligned_cols=236  Identities=40%  Similarity=0.589  Sum_probs=212.7

Q ss_pred             CchhhHHHHHcCCCcccCCCCCchhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHH
Q 026308            1 MDLVANTLLSAGASPAMLHTIEEIPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNAC   80 (240)
Q Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~   80 (240)
                      ++|+||++|++|++|+|+++++|+.++.+.+|+++|++|++++++.+.+..+++.+++.++|+||||++.+.+.+|.+..
T Consensus        27 ~~~~An~~La~GasP~Ma~~~~E~~e~~~~a~al~iN~Gtl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvgas~~R~~~~  106 (264)
T d1v8aa_          27 MNTTANALLALGASPVMAHAEEELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVS  106 (264)
T ss_dssp             HHHHHHHHHHHTCEEEECCCTTTHHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHH
T ss_pred             HhhHHHHHHHcCCCchhcCCHHHHHHHHHhcCceEeeCCCCCHHHHHHHHHHHHHHHHcCCCEEEcCcccCcchhHHHHH
Confidence            47999999999999999999999999999999999999999988889999999999999999999999999988888777


Q ss_pred             HHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCC-CChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCc
Q 026308           81 LELVQLKPTVIRGNASEIIALSRASVGPTKGVDSS-HESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVP  159 (240)
Q Consensus        81 ~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~  159 (240)
                      ++++..++++||||..|++.|+|... ..+|+|.. ...++..+.++.++++++++|++||..|++++++++|.++.+.+
T Consensus       107 ~~ll~~~~~vItgN~~Ei~~L~g~~~-~~~gvd~~~~~~~d~~~~a~~lA~~~~~vVvlkG~~D~I~dg~~~~~~~~G~~  185 (264)
T d1v8aa_         107 LEILSRGVDVLKGNFGEISALLGEEG-KTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAVDYVSDGRRTFAVYNGHE  185 (264)
T ss_dssp             HHHHHHCCSEEEEEHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHTTSEEEEESSSEEEECSSCEEEECCCCG
T ss_pred             HHHhccCCcEEcCCHHHHHHHhCccc-CCCCCCcccccHHHHHHHHHHHHHHhCCEEEecCCeeEEEcCCEEEEeCCCCc
Confidence            88887789999999999999999764 44555532 34578889999999999999999999999999999999998889


Q ss_pred             cCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHHHHhcccccccc
Q 026308          160 MMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQAALLSRTNITAL  239 (240)
Q Consensus       160 ~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~  239 (240)
                      .+.+++|+||+|+|++++|++++  ++++|+..|+.+++.|++.+.++..|+|+|..+++|.|+.+..+++.+++|++++
T Consensus       186 ~m~~itGtGc~Ls~~iaa~la~~--~~~~Aa~~A~~~~~~Age~A~~~~~GpGsf~~~llD~L~~l~~~~~~~~~~i~~v  263 (264)
T d1v8aa_         186 LLGRVTGTGCMVAALTGAFVAVT--EPLKATTSALVTFGIAAEKAYEEAKYPGSFHVKLYDWLYRINENVIRTYAKVREV  263 (264)
T ss_dssp             GGGGSTTHHHHHHHHHHHHHTTS--CHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHCCHHHHHHHCCEEEE
T ss_pred             hhccCCcccHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHcCCHHHHHhccCeEec
Confidence            99888999999999999999985  7889999999999999999999878999999999999999999999999999987

>d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: YjeF C-terminal domain-like
domain: Hypothetical protein YxkO
species: Bacillus subtilis [TaxId: 1423]

Probab=99.95  E-value=3.4e-28  Score=202.29  Aligned_cols=179  Identities=16%  Similarity=0.184  Sum_probs=145.2

Q ss_pred             cccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCC
Q 026308           29 PHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGP  108 (240)
Q Consensus        29 ~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~  108 (240)
                      ++.|++++|+|+..++   ....+++.+.+.++|+|+|++++....+.      . ...++|||||.+|+++|+|.+.  
T Consensus        93 ~~~~~~~iGpGlg~~~---~~~~~~~~l~~~~~p~VlDAdal~~~~~~------~-~~~~~IiTPH~gE~~rL~g~~~--  160 (275)
T d1kyha_          93 ETYRAIAIGPGLPQTE---SVQQAVDHVLTADCPVILDAGALAKRTYP------K-REGPVILTPHPGEFFRMTGVPV--  160 (275)
T ss_dssp             SCCSEEEECTTCCSSH---HHHHHHHHHTTSSSCEEECGGGCCSCCCC------C-CSSCEEECCCHHHHHHHHCCCH--
T ss_pred             hccceEEEeccccchH---HHHHHHHHHhhccCceeehhhhhhhhhcc------c-ccCceEecccHHHHHHhcCccc--
Confidence            4789999999985443   33566677778899999999996532211      1 1468999999999999999764  


Q ss_pred             CcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCc-EEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCHH
Q 026308          109 TKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGR-RVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAF  187 (240)
Q Consensus       109 ~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~-~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~~  187 (240)
                          +  +..++..+.++++.++++++||+||..+++++++ .++....+.+.+.. +|+||+|+|+|+++++++ .++.
T Consensus       161 ----~--~~~~~~~~~a~~~~~~~~~~vllKG~~t~I~~~~g~~~~~~~g~~~lat-~GsGDvLaGiIa~~lAq~-~~~~  232 (275)
T d1kyha_         161 ----N--ELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAK-GGTGDTLTGMILGMLCCH-EDPK  232 (275)
T ss_dssp             ----H--HHTTSHHHHHHHHHHHHTSEEEECSTTCEEECTTSCEEECCCCCGGGCS-TTHHHHHHHHHHHHHHHC-SSHH
T ss_pred             ----c--hhhccHHHHHHHHHHHhCCeEEeccCcceEEcCCCceeecCCCCccccC-CccccHHHHHHHHHHHcC-CCHH
Confidence                0  2234667889999999999999999999998754 56666666677764 999999999999999996 8999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCH
Q 026308          188 EATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQ  227 (240)
Q Consensus       188 ~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~  227 (240)
                      +|++.|+++|+.|++.++++..++|+++.|+++.|+++++
T Consensus       233 ~Aa~~a~~lh~~aa~~~~~~~~~~~~~asdi~~~ip~~~~  272 (275)
T d1kyha_         233 HAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWK  272 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGCCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999988745689999999999998765

>d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: YjeF C-terminal domain-like
domain: Hypothetical protein TM0922, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=7.1e-28  Score=200.96  Aligned_cols=184  Identities=20%  Similarity=0.265  Sum_probs=146.0

Q ss_pred             hhhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHH
Q 026308           24 IPDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIAL  101 (240)
Q Consensus        24 ~~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L  101 (240)
                      +.+..+++|++++|+|+....  .....+.+.....+.|+|+|+++.....      .+.+.  ..+.|||||..||++|
T Consensus        91 ~~~~~~~~~a~~iGpGlg~~~--~~~~~~~~~~~~~~~~~vldadal~~~~------~~~l~~~~~~~IlTPH~gE~~rL  162 (278)
T d2ax3a1          91 CLELSKDVDVVAIGPGLGNNE--HVREFVNEFLKTLEKPAVIDADAINVLD------TSVLKERKSPAVLTPHPGEMARL  162 (278)
T ss_dssp             HHHHHHTCSEEEECTTCCCSH--HHHHHHHHHHHHCCSCEEECHHHHHTCC------HHHHHTCSSCEEECCCHHHHHHH
T ss_pred             HHHhcccCCEEEecCCcccch--HHHHHHHHHHhccchheecchhhhhhhh------hhhhhhcCCCEEeCCCHhHHHHH
Confidence            334557899999999985443  2223344455677899999999854321      12222  3579999999999999


Q ss_pred             HcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          102 SRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       102 ~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      ++...         .+.++..+.+++++++++++||+||..+++.+++++|.++.+.+.+.. +|+||+|+|+|++++++
T Consensus       163 ~~~~~---------~~~~~~~~~a~~~a~~~~~~vvlKG~~t~i~~~~~~~~~~~g~~~la~-~GtGDvLaGiIaallAq  232 (278)
T d2ax3a1         163 VKKTV---------GDVKYNYELAEEFAKENDCVLVLKSATTIVTDGEKTLFNITGNTGLSK-GGSGDVLTGMIAGFIAQ  232 (278)
T ss_dssp             HTCCH---------HHHTTCHHHHHHHHHHHTSEEEECSSSEEEECSSCEEEECCCC-CCSS-TTHHHHHHHHHHHHHHT
T ss_pred             hhccc---------chhhhHHHHHHHHHHHcCCcEEecCccccccCcccceeecCCCCcccc-ccchhHHHHHHHHHHHc
Confidence            99754         223344577888999999999999999999998889988888888865 99999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhhhCCCccccHHHHHHHHhcCCHH
Q 026308          182 DPLHAFEATASALSVYGIAGEMGMSMAKGPASLRMHMIDCLHGLDQA  228 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~~~~~~~~~l~~~~~~  228 (240)
                      + .++.+|+..|+++|+.|++.+.+  .++|+.+.|+++.|+.++++
T Consensus       233 ~-~~~~~A~~~a~~lhg~aa~~a~~--~~~g~~Asdi~~~ip~~~~~  276 (278)
T d2ax3a1         233 G-LSPLEASTVSVYLHGFAAELFEQ--DERGLTASELLRLIPEAIRR  276 (278)
T ss_dssp             T-CCHHHHHHHHHHHHHHHHHTCSS--CGGGCCHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHHHH
Confidence            6 89999999999999999998754  46789999999999987763

>d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=2.2e-22  Score=165.89  Aligned_cols=167  Identities=25%  Similarity=0.264  Sum_probs=120.6

Q ss_pred             EEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEcccccCCcccch---HH----HHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           34 LYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPVAAGASGFRL---NA----CLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        34 vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~~~~~~~~~~---~~----~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      =+|+.|++.+.  +.++.+.+..++. ..++|+||++.+.++...   +.    .++++ +.+++||||..|++.|+|.+
T Consensus        72 daIkiG~l~s~--~~~~~i~~~l~~~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Ll-p~adiiTPN~~Ea~~L~g~~  148 (258)
T d1ub0a_          72 HAAKTGALGDA--AIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLF-PLADLVTPNRLEAEALLGRP  148 (258)
T ss_dssp             SEEEECCCCSH--HHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTG-GGCSEECCBHHHHHHHHCSC
T ss_pred             cEEEEeccccc--hHHHHHHHHHHHhccccceEeeeeecccCccccchhHHHHHHHhhc-ccceeecCCHHHHhhhcCCC
Confidence            34456886443  3345555555544 488999999977654321   11    12333 57999999999999999987


Q ss_pred             CCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHHHHHHHHH
Q 026308          106 VGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAF  178 (240)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~  178 (240)
                      +         .+.++..+++++|.+++...|++||..       ++++++++.+....++....+++|+||+|+++|+++
T Consensus       149 ~---------~~~~d~~~aa~~L~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtGd~~asaia~~  219 (258)
T d1ub0a_         149 I---------RTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAAL  219 (258)
T ss_dssp             C---------CSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHH
T ss_pred             C---------CCHHHHHHHHHHHHHhCCCeEEEeccccccccccceeccCCeEEecccceecCCCCCChHHHHHHHHHHH
Confidence            6         567888999999999988889999742       244566777766655544556799999999999999


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhhCCCccc
Q 026308          179 VAVDPLHAFEATASALSVYGIAGEMGMSMAKGPAS  213 (240)
Q Consensus       179 la~~~~~~~~A~~~A~~~~~~a~~~a~~~~~~~g~  213 (240)
                      |++| .++.+|++.|..+...+++.+.+...|.|.
T Consensus       220 La~G-~~l~~Av~~A~~~v~~~i~~a~~~G~g~gp  253 (258)
T d1ub0a_         220 LAKG-RPLAEAVAEAKAYLTRALKTAPSLGHGHGP  253 (258)
T ss_dssp             HHTT-CCHHHHHHHHHHHHHHHHHTCCCCSSSSCC
T ss_pred             HHcC-CCHHHHHHHHHHHHHHHHHhhcccCCCCCC
Confidence            9996 899999999999999999988765345554

>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Thiamin biosynthesis kinases
domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.88  E-value=7.9e-22  Score=163.20  Aligned_cols=165  Identities=21%  Similarity=0.171  Sum_probs=116.7

Q ss_pred             cCcEEEecCCCCCChHHHHHHHHHHHHhc-CCCEEEcccccCCcccc---hHH---H-HHHhccCCeEEcCCHHHHHHHH
Q 026308           31 VRALYVNVGTLSANWLPSMKAAAQLASQL-GKPWVLDPVAAGASGFR---LNA---C-LELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        31 ~d~vvi~~G~~~~~~~~~~~~~~~~~~~~-~~~vvlDp~~~~~~~~~---~~~---~-~~~~~~~~~vitPN~~E~~~L~  102 (240)
                      .+.-+|+.|++.+.  +.++.+.+.++++ ..++|+||++...++..   ...   . ..++ +.+++||||..|++.|+
T Consensus        71 ~~~~aIkiG~l~s~--~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Ll-p~adviTPN~~Ea~~Ll  147 (266)
T d1jxha_          71 VRIDTTKIGMLAET--DIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLL-PQVSLITPNLPEAAALL  147 (266)
T ss_dssp             SCCSEEEECCCCSH--HHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTG-GGCSEEECBHHHHHHHH
T ss_pred             ccCceEEEcccchH--HHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhh-hhhheecCCHHHHHHHh
Confidence            34445668897443  4445555655555 47899999987665421   111   1 2344 58999999999999998


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEEcCcEEEEEecCCccCCCccchhhHHHHHH
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVTDGRRVVGAHNGVPMMQKITATGCSVTALI  175 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~i  175 (240)
                      +...        ..+.++..++++.|.+.+...|++||..       ++++++++.+....+.....+++|+||+|+++|
T Consensus       148 ~~~~--------~~~~~~~~~aa~~l~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hGTGc~lasai  219 (266)
T d1jxha_         148 DAPH--------ARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAAL  219 (266)
T ss_dssp             TCCC--------CCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHH
T ss_pred             cCCc--------ccChHHHHHHHHHHHhcCCceEEEeccccCCCcceEEEEcCCceEEEeeccccCCCCCCchHHHHHHH
Confidence            8643        1456788888999998888889999752       356666666655544444456799999999999


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          176 AAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       176 aa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      +++|++| +++.+|++.|..|...+++.+.+.
T Consensus       220 aa~La~G-~~l~~Av~~A~~~v~~~i~~s~~~  250 (266)
T d1jxha_         220 AALRPRH-RSWGETVNEAKAWLSAALAQADTL  250 (266)
T ss_dssp             HHHGGGS-SSHHHHHHHHHHHHHHHHTTGGGC
T ss_pred             HHHHHcC-CCHHHHHHHHHHHHHHHHHhCCCC
Confidence            9999996 899999999999999999987654

>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: PfkB-like kinase
domain: Pyridoxamine kinase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.5e-21  Score=161.95  Aligned_cols=165  Identities=16%  Similarity=0.076  Sum_probs=125.1

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhc--CCCEEEcccccCCcccch---HH----HHHHhccCCeEEcCCHHHHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQL--GKPWVLDPVAAGASGFRL---NA----CLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~--~~~vvlDp~~~~~~~~~~---~~----~~~~~~~~~~vitPN~~E~~   99 (240)
                      .+|++.  +|++ +..+.+.+.++++..++.  +.++|+||++.+.++...   +.    .++++ +.+|+||||..|++
T Consensus        75 ~~daI~--tG~l~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Ll-p~adiitPN~~Ea~  151 (288)
T d1vi9a_          75 TCDAVL--SGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGL-PASDIIAPNLVELE  151 (288)
T ss_dssp             GCCEEE--ECCCSCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHH-HHCSEECCCHHHHH
T ss_pred             cCCEEE--EeccCChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhc-ccCCEEecCHHHHH
Confidence            456665  6785 666677777777766544  578999999987765321   11    12344 47999999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc----------cEEEcCcEEEEEecCC--ccCCCccch
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV----------DIVTDGRRVVGAHNGV--PMMQKITAT  167 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~----------~~i~~~~~~~~~~~~~--~~~~~~~Ga  167 (240)
                      .|+|.++         .+.+++.+++++|.+++...|++||..          .+++++++.+.+..+.  ....+++||
T Consensus       152 ~L~g~~i---------~~~~~~~~aa~~L~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Gt  222 (288)
T d1vi9a_         152 ILCEHAV---------NNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGV  222 (288)
T ss_dssp             HHHTSCC---------CSHHHHHHHHHHHHHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECCCCTTCCCSCH
T ss_pred             Hhhcccc---------chhHHHHHHHHHHHhcCCCEEEEEecCccccccCceeEEEEeCCceEEecccccccCCCCCCCh
Confidence            9999887         578899999999999998889999531          1345666666554332  234567999


Q ss_pred             hhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhh
Q 026308          168 GCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMSM  207 (240)
Q Consensus       168 GD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~~  207 (240)
                      ||+|+|++++++++| .++.+|+++|..+...+.+...+.
T Consensus       223 GD~fsa~l~a~l~~G-~~l~~A~~~A~~~v~~~l~~t~~~  261 (288)
T d1vi9a_         223 GDVTSGLLLVKLLQG-ATLQEALEHVTAAVYEIMVTTKAM  261 (288)
T ss_dssp             HHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHhhhhc
Confidence            999999999999996 899999999999999998877654

>d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: PfkB-like kinase
domain: Pyridoxal kinase
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.83  E-value=2.2e-19  Score=151.34  Aligned_cols=164  Identities=18%  Similarity=0.162  Sum_probs=117.2

Q ss_pred             ccCcEEEecCCC-CCChHHHHHHHHHHHHhc--CCCEEEcccccCCc---cc---chHH---HHH-HhccCCeEEcCCHH
Q 026308           30 HVRALYVNVGTL-SANWLPSMKAAAQLASQL--GKPWVLDPVAAGAS---GF---RLNA---CLE-LVQLKPTVIRGNAS   96 (240)
Q Consensus        30 ~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~--~~~vvlDp~~~~~~---~~---~~~~---~~~-~~~~~~~vitPN~~   96 (240)
                      +.|++.  .|++ +.++++.+.++++..+..  +.++|+||++.+..   +.   ..+.   .++ ++ +.+++||||..
T Consensus        73 ~~daI~--tG~l~s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Ll-p~adiITPN~~  149 (309)
T d1lhpa_          73 QYDYVL--TGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVV-PVADIITPNQF  149 (309)
T ss_dssp             CCSEEE--ECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTG-GGCSEECCCHH
T ss_pred             ccCeee--ecccCCHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhc-CcCcEEeccHH
Confidence            567766  6886 556666666666655443  57899999998741   11   1122   233 44 48999999999


Q ss_pred             HHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCc-------cEEE-cCc------------EEEEEec
Q 026308           97 EIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAV-------DIVT-DGR------------RVVGAHN  156 (240)
Q Consensus        97 E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~-------~~i~-~~~------------~~~~~~~  156 (240)
                      |++.|+|.+.         .+.+++.+++++|++++...||+||..       ++++ .+.            ..+.++.
T Consensus       150 Ea~~Ltg~~~---------~~~~~~~~aa~~L~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (309)
T d1lhpa_         150 EAELLTGRKI---------HSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEM  220 (309)
T ss_dssp             HHHHHHTCCC---------CSHHHHHHHHHHHHHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEE
T ss_pred             HHhHHhcccc---------CCHHHHHHHHHHHHhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEee
Confidence            9999999876         677889999999999988889999642       2221 110            1122332


Q ss_pred             CCccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Q 026308          157 GVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGEMGMS  206 (240)
Q Consensus       157 ~~~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~~a~~  206 (240)
                      ++ ...+++|+||+|+|++++++..++.++.+|++.|..+...+.+...+
T Consensus       221 ~~-i~~~~~GtGD~fsa~l~a~l~~g~~~L~~A~~~A~~~v~~~l~~T~~  269 (309)
T d1lhpa_         221 HK-VDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVLQRTIK  269 (309)
T ss_dssp             EC-CSSCCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-cCCCCCcccHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            22 22356999999999999999875458899999999999999887765

>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Putative sugar kinase TM0828
species: Thermotoga maritima [TaxId: 2336]

Probab=99.73  E-value=1.7e-17  Score=140.23  Aligned_cols=155  Identities=14%  Similarity=0.077  Sum_probs=111.1

Q ss_pred             hhhhcccCcEEEecCCC-CCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCC-HHHHHH
Q 026308           25 PDFTPHVRALYVNVGTL-SANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGN-ASEIIA  100 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~-~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN-~~E~~~  100 (240)
                      .+.+..+|++++. |.+ .....+.+..+++.++++++++++||.+     .   .....++  ..+++|+|| ..|++.
T Consensus       129 ~~~~~~~~~v~~s-Gs~~~~~~~~~~~~l~~~a~~~~~~v~~D~s~-----~---~~~~~~~~~~~~~~ikpn~~~e~~~  199 (319)
T d2ajra1         129 KMTLSKVDCVVIS-GSIPPGVNEGICNELVRLARERGVFVFVEQTP-----R---LLERIYEGPEFPNVVKPDLRGNHAS  199 (319)
T ss_dssp             HHHHTTCSEEEEE-SCCCTTSCTTHHHHHHHHHHHTTCEEEEECCH-----H---HHHHHHHSSCCCSEECCCCTTCCSC
T ss_pred             HhhcccccEEEEe-cCCcccccHHHHHHHHHHHHhcCCcccccchh-----h---HHHHHhhhcccCcEEeeccHHHHHH
Confidence            4557789999986 543 2222356788999999999999999875     1   1122332  468999999 568888


Q ss_pred             HHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCcc-EEEcCcEEEEE-ecCCccCCCccchhhHHHH-HHHH
Q 026308          101 LSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVD-IVTDGRRVVGA-HNGVPMMQKITATGCSVTA-LIAA  177 (240)
Q Consensus       101 L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~-~i~~~~~~~~~-~~~~~~~~~~~GaGD~lag-~iaa  177 (240)
                      |+|.+.         .+.++..++++.|.+++...||.+|..+ +++.+++.++. +.+...+.+++||||+|.| ++++
T Consensus       200 l~g~~~---------~~~~d~~~~~~~l~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~i~~  270 (319)
T d2ajra1         200 FLGVDL---------KTFDDYVKLAEKLAEKSQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYY  270 (319)
T ss_dssp             BTTBCC---------CSHHHHHHHHHHHHHHSSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHH
T ss_pred             HHhhcc---------CCHHHHHHHHhhhhhhcceeeeecccceeeeeccCCceEecccccCCCCCCCChHHHHHHHHHHH
Confidence            988765         5678888999999888655455558766 44555544444 4444556688999999955 5667


Q ss_pred             HHhcCCCCHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYG  198 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~  198 (240)
                      ++.+| .++.+++++|++++.
T Consensus       271 ~l~~g-~~~~~a~~~a~a~aa  290 (319)
T d2ajra1         271 FIKHG-ANFLEMAKFGFASAL  290 (319)
T ss_dssp             HHHHC-SCHHHHHHHHHHHHH
T ss_pred             HHHCC-CCHHHHHHHHHHHHH
Confidence            77775 899999999987544

>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Tagatose-6-phosphate kinase LacC
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.73  E-value=1.5e-16  Score=133.55  Aligned_cols=160  Identities=14%  Similarity=0.028  Sum_probs=118.9

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhc--cCCeEEcCCHHHHHHHH
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQ--LKPTVIRGNASEIIALS  102 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~--~~~~vitPN~~E~~~L~  102 (240)
                      .+.+..+|++++...++.....+.+..+++.+++.++++++|+.+.        .....+.  .++++++||..|+..|+
T Consensus       122 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~n~~E~~~l~  193 (313)
T d2f02a1         122 DQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGD--------SLRQVLQGPWKPYLIKPNLEELEGLL  193 (313)
T ss_dssp             HHHHTTCSEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTH--------HHHHHHHSSCCCSEECCBHHHHHHHH
T ss_pred             hhhhcccceEEEecccccccCHHHHHHHHHHHHhcCCceeecchHH--------HHHHHhhhcccceEEEehhhhHHHhh
Confidence            4566789999986333332233667888899999999999999761        1122222  47899999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHh
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVA  180 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la  180 (240)
                      |....       ..+.++..+.++++...+...|++| |..+ +++++++.+.++.++..+.+++||||+|+|.+...+.
T Consensus       194 g~~~~-------~~~~~~~~~~~~~~~~~g~~~vivT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGD~f~ag~i~~l~  266 (313)
T d2f02a1         194 GQDFS-------ENPLAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLA  266 (313)
T ss_dssp             TCCCC-------SSCHHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHH
T ss_pred             ccccc-------cchhhHHHHHHHHHHhcCCceeEEecccceEEEEeCCceEecccccCCCCCCcCHHHHHHHHHHHHHH
Confidence            97641       1345566666676766666778889 7765 5567777888887766678899999999888888888


Q ss_pred             cCCCCHHHHHHHHHHHHHHH
Q 026308          181 VDPLHAFEATASALSVYGIA  200 (240)
Q Consensus       181 ~~~~~~~~A~~~A~~~~~~a  200 (240)
                      +| .++.+++++|+.+.+..
T Consensus       267 ~g-~~~~~al~~A~a~aa~~  285 (313)
T d2f02a1         267 KD-APAAELLKWGMAAGMAN  285 (313)
T ss_dssp             TT-CCHHHHHHHHHHHHHHH
T ss_pred             cC-CCHHHHHHHHHHHHHHH
Confidence            85 89999999998866544

>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Fructose 1-phosphate kinase FruB
species: Bacillus halodurans [TaxId: 86665]

Probab=99.72  E-value=3.5e-16  Score=130.59  Aligned_cols=156  Identities=17%  Similarity=0.099  Sum_probs=119.8

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      .+..++++++...++.....+.+..+.+.+++.+.++++|+..        ..........+++++||..|+..+++.+.
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~d~~~--------~~~~~~~~~~~~~l~~n~~E~~~~~~~~~  193 (306)
T d2abqa1         122 ELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVAVDTSG--------EALHEVLAAKPSFIKPNHHELSELVSKPI  193 (306)
T ss_dssp             TCCTTCEEEEESCCCTTSCTTHHHHHHHHHHTTTCEEEEECCH--------HHHHHHGGGCCSEECCBHHHHHHHHTSCC
T ss_pred             hhccCCEEEEcCccccchHHHHHHHHHHHHHHcCCceeccchh--------hHHHHHhhhcceeeccccccccccccccc
Confidence            3456788888644443334456678888899999999999975        11122233589999999999999999875


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                               .+.++..++++++.+++...+++| |+.+ +++++++.++++.++..+.+++||||+|.|.+.+.+.++ .
T Consensus       194 ---------~~~~~~~~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g-~  263 (306)
T d2abqa1         194 ---------ASIEDAIPHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEG-K  263 (306)
T ss_dssp             ---------CSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTT-C
T ss_pred             ---------ccccchhhcccccccccccceeeeecccCcccccccccccccccCCccCCCCcHHHHHHHHHHHHHHcC-C
Confidence                     566778888889888877778888 8765 456777888888776667788999999988887778885 8


Q ss_pred             CHHHHHHHHHHHHHHH
Q 026308          185 HAFEATASALSVYGIA  200 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a  200 (240)
                      ++.+++++|+.+++.+
T Consensus       264 ~~~~al~~a~a~aa~~  279 (306)
T d2abqa1         264 SLEDAVPFAVAAGSAT  279 (306)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999866544

>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.1e-12  Score=110.33  Aligned_cols=169  Identities=15%  Similarity=0.116  Sum_probs=105.8

Q ss_pred             hhhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcC
Q 026308           25 PDFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRA  104 (240)
Q Consensus        25 ~~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~  104 (240)
                      ...+..++++.+. ++......+.+...++.+++.+..+++|+..............+++ .++++++||+.|++.|+|.
T Consensus       153 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dil~~Ne~Ea~~l~~~  230 (342)
T d1bx4a_         153 WMLVEKARVCYIA-GFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVM-PYVDILFGNETEAATFARE  230 (342)
T ss_dssp             HHHHHHCSEEEEE-GGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHG-GGCSEEEEEHHHHHHHHHH
T ss_pred             HHHHhhcccceec-ccccchhHHHHHHHHHHhhhccceeecccccccchhccccchhhhh-ccccEEeecHHHHHHhhCc
Confidence            3445677877774 4432333455666777788888888888754221111111223344 4789999999999999986


Q ss_pred             CCCCCcCCCCCCChHHHHHHHHHHHH---hcCCEEEEe-cCccE-EEcCcEEEEEec---CCccCCCccchhhHHHHHHH
Q 026308          105 SVGPTKGVDSSHESMDAMEAARCLAE---ASGAIVAVS-GAVDI-VTDGRRVVGAHN---GVPMMQKITATGCSVTALIA  176 (240)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~a~~l~~---~~~~~Vvit-G~~~~-i~~~~~~~~~~~---~~~~~~~~~GaGD~lag~ia  176 (240)
                      ..      ....+.+++.+..+.+.+   ++...|++| |..+. +.++++...++.   +...+.+++||||+|.|++.
T Consensus       231 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl  304 (342)
T d1bx4a_         231 QG------FETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFL  304 (342)
T ss_dssp             TT------CCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHH
T ss_pred             CC------cccchhhhhHHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHH
Confidence            43      001344455544444332   233457778 87664 445555444332   22345678999999988888


Q ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          177 AFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       177 a~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ..+.++ .++.+|+++|+.+++.+.+
T Consensus       305 ~~l~~g-~~~~~a~~~a~~~Aa~~v~  329 (342)
T d1bx4a_         305 SQLVSD-KPLTECIRAGHYAASIIIR  329 (342)
T ss_dssp             HHHTTT-CCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            888885 8999999999887665443

>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=1.7e-11  Score=100.35  Aligned_cols=139  Identities=23%  Similarity=0.136  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308           47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR  126 (240)
Q Consensus        47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~  126 (240)
                      +..........+.+.+...+|...     + .....++ ..+++++||..|+..++|...         ....+.....+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~-~~~d~~~~n~~E~~~l~~~~~---------~~~~~~~~~~~  207 (306)
T d1rkda_         144 ESVMAAAKIAHQNKTIVALNPAPA-----R-ELPDELL-ALVDIITPNETEAEKLTGIRV---------ENDEDAAKAAQ  207 (306)
T ss_dssp             HHHHHHHHHHHHTTCEEEECCCSC-----C-CCCHHHH-TTCSEECCCHHHHHHHHSCCC---------SSHHHHHHHHH
T ss_pred             hhhhhHHHHhhhcccccccCchhh-----h-hhHHHHH-hhcccccCCHHHHHHHhCCCc---------ccchhHHHHHH
Confidence            444555555566666666666541     1 1122444 478999999999999999764         23334444444


Q ss_pred             HHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          127 CLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       127 ~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+.+++...|++| |..+ ++.++++.++++..+..+.+++||||+|.|.+...+.++ .++.+|+++|+.+++.+..
T Consensus       208 ~~~~~~~~~vivt~G~~g~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~Ag~l~~l~~g-~~~~~a~~~a~~~aa~~v~  284 (306)
T d1rkda_         208 VLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEE-KPLPEAIRFAHAAAAIAVT  284 (306)
T ss_dssp             HHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHhhcCCcEEEEecCCceEEEeecCceEEeCCccCccccCCCchHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhC
Confidence            5555555668888 7765 445677788888777677789999999988777777775 8999999999987665544

>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical protein TM0415
species: Thermotoga maritima [TaxId: 2336]

Probab=99.36  E-value=2.9e-12  Score=105.03  Aligned_cols=151  Identities=13%  Similarity=0.002  Sum_probs=94.9

Q ss_pred             ccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCc-------ccchHHHHHHhccCCeEEcCCHHHHHHHH
Q 026308           30 HVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGAS-------GFRLNACLELVQLKPTVIRGNASEIIALS  102 (240)
Q Consensus        30 ~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~-------~~~~~~~~~~~~~~~~vitPN~~E~~~L~  102 (240)
                      +++.+.+.+-...+..    ..+++.+++.++++.+|+......       .......+++++ ..++++||..|++.|+
T Consensus       114 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~-~~d~i~~N~~E~~~l~  188 (288)
T d1vk4a_         114 EGEAVHINPLWYGEFP----EDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLK-YLDLFKVDSREAETLT  188 (288)
T ss_dssp             CSSEEEECCSSTTSSC----GGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGG-GCSEEEEEHHHHHHHH
T ss_pred             ccceEEEchhhhccch----HHHHHHHHHhCcceeeccccccccccccccccccHHHHHHHHH-hCCcccCCHHHHHHHh
Confidence            4556665433222222    234556778889999998542100       001122355664 7899999999999999


Q ss_pred             cCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEecCccEEEcCcEEEEEecCCccCCCccchhhHHHHHHH-HHHhc
Q 026308          103 RASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVSGAVDIVTDGRRVVGAHNGVPMMQKITATGCSVTALIA-AFVAV  181 (240)
Q Consensus       103 g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~VvitG~~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~ia-a~la~  181 (240)
                      +.+.              ..+.++.+.+.+...|+.+|..+.++..+..+..+.++..+.+++||||+|.|++. +++.+
T Consensus       189 ~~~~--------------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~vvDttGAGDsF~ag~i~~~l~~  254 (288)
T d1vk4a_         189 GTND--------------LRESCRIIRSFGAKIILATHASGVIVFDGNFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFK  254 (288)
T ss_dssp             SCSC--------------HHHHHHHHHHTTCSSEEEEETTEEEEESSSEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTS
T ss_pred             hhhh--------------HHHHHhhhhcccceeeeccccceeeccccccccccCCCCccCCCCCHHHHHHHHHHHHHHHC
Confidence            8532              22344445444444466666655554445566666566667789999999977654 55667


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q 026308          182 DPLHAFEATASALSVYGIA  200 (240)
Q Consensus       182 ~~~~~~~A~~~A~~~~~~a  200 (240)
                      + .++.+|+++|..+++..
T Consensus       255 g-~~~~~a~~~A~~~Aa~~  272 (288)
T d1vk4a_         255 K-MSIEKATKFAAAVTSVK  272 (288)
T ss_dssp             C-CCHHHHHHHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHH
Confidence            5 89999999998865543

>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: 2-keto-3-deoxygluconate kinase
species: Thermus thermophilus [TaxId: 274]

Probab=99.27  E-value=9.3e-11  Score=96.41  Aligned_cols=155  Identities=17%  Similarity=-0.035  Sum_probs=105.4

Q ss_pred             hhhcccCcEEEecCC---CCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccch---HHHHHHhccCCeEEcCCHHHHH
Q 026308           26 DFTPHVRALYVNVGT---LSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRL---NACLELVQLKPTVIRGNASEII   99 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~---~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~---~~~~~~~~~~~~vitPN~~E~~   99 (240)
                      ..++.++.+.+. ++   ..+...+.+..+++..++.++++++|+..........   ....+.+ ...+++.+|..|+.
T Consensus       121 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~e~~  198 (302)
T d1v19a_         121 DYLEGVRFLHLS-GITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERAL-PGVDLLFLSEEEAE  198 (302)
T ss_dssp             GGGTTCSEEEEE-THHHHHCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHG-GGCSEEEEEHHHHH
T ss_pred             HHHhcccEEeee-ccccccchhHHHHHHHHHHHHHhcCCccccccchhhhccchhhhHHHHHhhh-hhccchhhhhhhhh
Confidence            455677777764 22   1233345667788888999999999987533211111   1122333 36899999999999


Q ss_pred             HHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHH
Q 026308          100 ALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAA  177 (240)
Q Consensus       100 ~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa  177 (240)
                      .+.+...             +      .+.......|++| |..+ +++.+++.+++++.+..+.+++||||+|.|++..
T Consensus       199 ~~~~~~~-------------~------~~~~~~~~~viit~G~~G~~~~~~~~~~~~p~~~v~vvDttGAGDaf~a~~~~  259 (302)
T d1v19a_         199 LLFGRVE-------------E------ALRALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLA  259 (302)
T ss_dssp             HHHSSTT-------------H------HHHHTCCSEEEEECTTSCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHHHH
T ss_pred             hhhhhhh-------------h------hhhhccceEEEEecCCCCCccccccccccccccccccCCCCChhHHHHHHHHH
Confidence            8887531             1      1223334557777 8766 4567778888886666677889999999988887


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          178 FVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       178 ~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      .+.++ .++.+|+++|+.+++.+.+
T Consensus       260 ~~~~g-~~~~~a~~~a~~~Aa~~v~  283 (302)
T d1v19a_         260 GAVWG-LPVEERLRLANLLGASVAA  283 (302)
T ss_dssp             HHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             HHHcC-CCHHHHHHHHHHHHHHHHc
Confidence            77875 8999999999887665543

>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.21  E-value=1.3e-10  Score=95.53  Aligned_cols=152  Identities=17%  Similarity=0.114  Sum_probs=102.6

Q ss_pred             hhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCC
Q 026308           27 FTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASV  106 (240)
Q Consensus        27 ~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~  106 (240)
                      .....+++.+. +...   .   ....+...+.+.++++|+.....  ..    .... ...+++.||..|+....+...
T Consensus       125 ~~~~~~~~~~~-~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~-~~~~~~~~~~~e~~~~~~~~~  190 (299)
T d1vm7a_         125 TLSESDILLLQ-NEIP---F---ETTLECAKRFNGIVIFDPAPAQG--IN----EEIF-QYLDYLTPNEKEIEALSKDFF  190 (299)
T ss_dssp             HHTTCSEEEEC-SSSC---H---HHHHHHHHHCCSEEEECCCSCTT--CC----GGGG-GGCSEECCBHHHHHHHHHHHH
T ss_pred             hcccccceeec-cccc---c---hhhhHhhhhcCceEEEecCcchh--hh----HHHH-hhcccccccHHHHHhhhcccc
Confidence            34456777764 3321   1   22334566778889999875321  11    1122 468999999999998877543


Q ss_pred             CCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhcCCC
Q 026308          107 GPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAVDPL  184 (240)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~~~~  184 (240)
                               ....+.....+.+.+.+...|++| |..+ ++.++++.+..+..+..+.+++||||+|.|.+...+.++ .
T Consensus       191 ---------~~~~~~~~~~~~l~~~~~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~vvDttGAGDaf~Ag~i~~l~~g-~  260 (299)
T d1vm7a_         191 ---------GEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEG-K  260 (299)
T ss_dssp             ---------SCCCCHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTT-C
T ss_pred             ---------ccchhhhhhhhhhhcCCCcEEEEeCCCCceEEEeccceEEEeeeeeeeECCCCccHHHHHHHHHHHHcC-C
Confidence                     112234455566766666778888 7654 556777777777766677789999999988777778885 8


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q 026308          185 HAFEATASALSVYGIAGE  202 (240)
Q Consensus       185 ~~~~A~~~A~~~~~~a~~  202 (240)
                      ++.+|+++|+.+++.+.+
T Consensus       261 ~~~~al~~a~~~aa~~~~  278 (299)
T d1vm7a_         261 NPEEAVIFGTAAAAISVT  278 (299)
T ss_dssp             CHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHhC
Confidence            999999999987665443

>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.16  E-value=5.8e-10  Score=93.49  Aligned_cols=175  Identities=14%  Similarity=0.093  Sum_probs=95.2

Q ss_pred             hhhcccCcEEEecCCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCC
Q 026308           26 DFTPHVRALYVNVGTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRAS  105 (240)
Q Consensus        26 ~~~~~~d~vvi~~G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~  105 (240)
                      ..+...+......-.+..........+....+..+.++++|+.............+..+ ...++++||..|++.|++..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~di~~~N~~E~~~l~~~~  225 (350)
T d2absa1         147 TFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLL-LHTNILFGNEEEFAHLAKVH  225 (350)
T ss_dssp             HHTTTCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHH-HTCSEEEEEHHHHHHHHHHH
T ss_pred             ccccccccccceeeeeccccchhHHHHHHhhhhccceEEEecchhhhhhhhhcchhhhc-ccCCEEEecHHHHHHHhCCC
Confidence            34455555555422244444444555555566667888888765221111112223444 47899999999999998753


Q ss_pred             CCCCc--CCCCCCChHHHHHHH---HHHHHh-----cCCEEEEe-cCccEE-EcC--cE---EEEEecCC---ccCCCcc
Q 026308          106 VGPTK--GVDSSHESMDAMEAA---RCLAEA-----SGAIVAVS-GAVDIV-TDG--RR---VVGAHNGV---PMMQKIT  165 (240)
Q Consensus       106 ~~~~~--~~~~~~~~~~~~~~a---~~l~~~-----~~~~Vvit-G~~~~i-~~~--~~---~~~~~~~~---~~~~~~~  165 (240)
                      .....  ........++..+..   .++...     +...+|+| |..+.+ +++  ++   ...++.+.   ..+.+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDtt  305 (350)
T d2absa1         226 NLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTN  305 (350)
T ss_dssp             TCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCT
T ss_pred             CchhhHHHHhhhcchhhHHHHHHHHHHHHHhhhhccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCC
Confidence            20000  000001122222222   222222     23357888 877654 321  11   22232221   2355789


Q ss_pred             chhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          166 ATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       166 GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ||||+|.|.+...+.++ .++.+++++|+.+++.+++
T Consensus       306 GAGDaF~ag~l~~ll~g-~~~~~al~~a~~~Aa~~v~  341 (350)
T d2absa1         306 GAGDAFVGGFLYALSQG-KTVKQCIMCGNACAQDVIQ  341 (350)
T ss_dssp             THHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHhc
Confidence            99999977666667775 8999999999887665543

>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Ribokinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.3e-09  Score=89.25  Aligned_cols=141  Identities=20%  Similarity=0.124  Sum_probs=96.7

Q ss_pred             HHHHHHHHHHHhcCCCEEEcccccCCcccchHHHHHHhccCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHH
Q 026308           47 PSMKAAAQLASQLGKPWVLDPVAAGASGFRLNACLELVQLKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAAR  126 (240)
Q Consensus        47 ~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~~~~~~~~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~  126 (240)
                      +......+.+++.+.++++|+........     .... ...+++.+|..|.....+...         .+..+......
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~e~~~~~~~~~---------~~~~~~~~~~~  208 (308)
T d2fv7a1         144 ATSLEALTMARRSGVKTLFNPAPAIADLD-----PQFY-TLSDVFCCNESEAEILTGLTV---------GSAADAGEAAL  208 (308)
T ss_dssp             HHHHHHHHHHHHTTCEEEECCCSCCTTCC-----THHH-HTCSEEEEEHHHHHHHHSSCC---------CSHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCceEEecccchhhhhh-----hhHH-hhhhhhhhhHHHHHHhhhhhc---------cchhhhhhHHH
Confidence            44566677788899999999976322111     1222 256788899999888777543         34556666777


Q ss_pred             HHHHhcCCEEEEe-cCccE-EEcC--cEEEEEecCCccCCCccchhhHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 026308          127 CLAEASGAIVAVS-GAVDI-VTDG--RRVVGAHNGVPMMQKITATGCSVTALIAAFVAV-DPLHAFEATASALSVYGIAG  201 (240)
Q Consensus       127 ~l~~~~~~~Vvit-G~~~~-i~~~--~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~-~~~~~~~A~~~A~~~~~~a~  201 (240)
                      .+.+++...|++| |..+. ++++  ...+.+|..+..+.+++||||+|.|.+...++. .+.++.+++.+|+.+++.+.
T Consensus       209 ~~~~~~~~~vivT~G~~G~~~~~~~~~~~~~~p~~~v~vvDttGAGDaF~ag~~~~l~~~~~~~~~~a~~~a~~~aa~~v  288 (308)
T d2fv7a1         209 VLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSV  288 (308)
T ss_dssp             HHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCEEEEEecccceeeecccccceeecccccccccCCCChhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence            7777777778888 87654 4442  336667755555678899999998877765642 24789999999988766554


Q ss_pred             H
Q 026308          202 E  202 (240)
Q Consensus       202 ~  202 (240)
                      +
T Consensus       289 ~  289 (308)
T d2fv7a1         289 Q  289 (308)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Hypothetical fructokinase ST2478
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=99.08  E-value=4e-10  Score=92.58  Aligned_cols=101  Identities=10%  Similarity=0.037  Sum_probs=75.7

Q ss_pred             cCCeEEcCCHHHHHHHHcCCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCC
Q 026308           86 LKPTVIRGNASEIIALSRASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQK  163 (240)
Q Consensus        86 ~~~~vitPN~~E~~~L~g~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~  163 (240)
                      ...+.+.+|..|...+.+..           +.++    +.++.+++...|++| |..+ ++++++..++++..+..+.+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~-----------~~~~----~~~~l~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvD  249 (308)
T d2dcna1         185 FHLKFLITDTDDSKIILGES-----------DPDK----AAKAFSDYAEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVED  249 (308)
T ss_dssp             CCEEEEEEEHHHHHHHHSCC-----------CHHH----HHHHHTTTEEEEEEEEETTEEEEEETTEEEEEECCCCCCSC
T ss_pred             cccccccchhhhhhhhcchh-----------hhhh----hhhhcccceeEEeeccccCceeeecCCcccccccceeeecC
Confidence            35688999999999998753           2222    223445555568888 8765 45667788888877666778


Q ss_pred             ccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 026308          164 ITATGCSVTALIAAFVAVDPLHAFEATASALSVYGIAGE  202 (240)
Q Consensus       164 ~~GaGD~lag~iaa~la~~~~~~~~A~~~A~~~~~~a~~  202 (240)
                      ++||||+|.|.+...+.++ .++.+|+++|+.+++.+.+
T Consensus       250 t~GAGDaf~ag~i~~l~~g-~~~~~a~~~a~~~aa~~~~  287 (308)
T d2dcna1         250 VTGAGDALGGTFLSLYYKG-FEMEKALDYAIVASTLNVM  287 (308)
T ss_dssp             CTTHHHHHHHHHHHHHTTT-CCHHHHHHHHHHHHHHHTT
T ss_pred             CCChHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhC
Confidence            8999999999888888886 8999999999987665443

>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Aminoimidazole riboside kinase
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.97  E-value=1.1e-09  Score=89.63  Aligned_cols=156  Identities=14%  Similarity=0.027  Sum_probs=93.9

Q ss_pred             cccCcEEEec-CCCCCChHHHHHHHHHHHHhcCCCEEEcccccCCcccchHH----HHHHhccCCeEEcCCHHHHHHHHc
Q 026308           29 PHVRALYVNV-GTLSANWLPSMKAAAQLASQLGKPWVLDPVAAGASGFRLNA----CLELVQLKPTVIRGNASEIIALSR  103 (240)
Q Consensus        29 ~~~d~vvi~~-G~~~~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~~~~~~~----~~~~~~~~~~vitPN~~E~~~L~g  103 (240)
                      ...+++.+.. ++......+...++++.+++.+++++.|+............    ..+.+ ...+....+..+......
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  194 (304)
T d1tyya_         116 RQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSA-ALASICKVSADELCQLSG  194 (304)
T ss_dssp             CTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHH-HHCSEEEEEHHHHHHHHC
T ss_pred             ccceEEEEecccccccchHHHHHHHHHHhhhcCceEeeccccccccccchhhhhhhhhhcc-cccccccccccccccccc
Confidence            3455555532 22333345666778888999999999998643211111111    11222 134555556666555544


Q ss_pred             CCCCCCcCCCCCCChHHHHHHHHHHHHhcCCEEEEe-cCcc-EEEcCcEEEEEecCCccCCCccchhhHHHHHHHHHHhc
Q 026308          104 ASVGPTKGVDSSHESMDAMEAARCLAEASGAIVAVS-GAVD-IVTDGRRVVGAHNGVPMMQKITATGCSVTALIAAFVAV  181 (240)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~Vvit-G~~~-~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~  181 (240)
                      ...           ..   .+.+.+.+.+...|++| |..+ +++++++.++++.++..+.+++||||+|.|.+...+.+
T Consensus       195 ~~~-----------~~---~a~~~~~~~g~~~vivt~G~~Ga~~~~~~~~~~~p~~~v~vvdt~GAGDaf~ag~~~~l~~  260 (304)
T d1tyya_         195 ASH-----------WQ---DARYYLRDLGCDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSR  260 (304)
T ss_dssp             CSS-----------GG---GGSSTTGGGTCSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTT
T ss_pred             cch-----------HH---HHHHHHHhcccceeeeecccceeeeeccCCccccCcccccCCCCCCchHHHHHHHHHHHHh
Confidence            321           11   12223333444557888 7765 45677778888877767788999999999988888888


Q ss_pred             CCCC-----HHHHHHHHHHHHHHH
Q 026308          182 DPLH-----AFEATASALSVYGIA  200 (240)
Q Consensus       182 ~~~~-----~~~A~~~A~~~~~~a  200 (240)
                      + .+     +.+|+++|+.+++.+
T Consensus       261 g-~~~~~~~l~~al~~a~~~As~~  283 (304)
T d1tyya_         261 A-NCWDHALLAEAISNANACGAMA  283 (304)
T ss_dssp             S-SSCCHHHHHHHHHHHHHHHHHG
T ss_pred             C-CCccchHHHHHHHHHHHHHHHH
Confidence            5 55     567777777655543