Citrus Sinensis ID: 026332

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS
Secondary Structure (PSIPRED)
ccccccccccHHHHHcccccccccccccHHHHHHcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEccHHHHHccccccccccccccccHHHcHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHcccccHHHcc
Coil and Loop (DISEMBL)
mcaddatcgtptwigkgltcvcfkrkgtyeRICINLTPQQAERLRRLKHRMKVyfdasrpdHQEALRALWAatypdqelhgLISDQWkemgwqgkdpstdfrgagfISLENLLFFAKTFSTSFQRLLRKqggkradweypfavAGVNITFMLMQMLdleatkprtFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVlqieempsyslls
Flexible Loop (DISEMBL)
mcaddatcgtptwigkgltCVCFKRKGTYericinltpqQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQggkradweyPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMddvlqieempsyslls
Low Complexity Region (SEG)
MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS
Disordered region (IsUnstruct)
******TCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQ***********
Disordered Region (DISOPRED)
***DDA*CGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATY************WKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLL*********WEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS
Disordered Region (DISEMBL)
********GTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS
Disordered Region (DISPRO)
*CADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	240	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.729	0.179	0.319	4e-26
Q54RS7	618	ELMO domain-containing pr	no	no	0.733	0.284	0.328	3e-24
Q54VR8	284	ELMO domain-containing pr	no	no	0.720	0.609	0.283	4e-20
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.825	0.675	0.277	2e-19
Q5NVD7	326	ELMO domain-containing pr	yes	no	0.737	0.542	0.320	2e-18
Q8IZ81	293	ELMO domain-containing pr	no	no	0.687	0.563	0.286	5e-18
Q0IIE6	326	ELMO domain-containing pr	yes	no	0.737	0.542	0.315	8e-18
Q08DZ3	293	ELMO domain-containing pr	no	no	0.687	0.563	0.298	1e-17
Q8N336	334	ELMO domain-containing pr	yes	no	0.737	0.529	0.312	1e-17
Q54UP9	1267	Ankyrin repeat and ELMO d	no	no	0.704	0.133	0.291	1e-17

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 19/194 (9%)

Query: 40  QAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPST 99
           Q  R + + +R  V F+    +H   L  LW+ TYP  +L   +S+QWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 100 DFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLE 159
           DFR  G   L+NL++FA+ ++  F++++  Q   R + EYP A AG+ +TF L   +   
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQ-IDRKEREYPTATAGIVLTFELYNSIFKM 480

Query: 160 AT---KPRTFVRSV---------------FLQMLSDNEWAFDLLYCVAFVVMDKQWLERN 201
            T    P     S                F  +   +  AF+ +YC  F ++D  W + N
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540

Query: 202 ATYMEFNDVLKSTR 215
            TYM F  ++ S +
Sbjct: 541 GTYMHFQKIMSSVK 554

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score =  112 bits (279), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 106/192 (55%), Gaps = 16/192 (8%)

Query: 36  LTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGK 95
           +T +Q++ ++ L  +    ++++ PDH+E L+ LW+  YP+QE     S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 96  DPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNIT---FML 152
           DP+ DFRG G + L NL+   +  +   Q +L +      D +YPFAVAG+NI+   F +
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ------DRDYPFAVAGINISNLIFEV 469

Query: 153 MQMLDLEATKPRTFVR------SVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYME 206
            Q+ +    +P           ++   M   N+ AF+ LY + F ++D  W++ NATYM 
Sbjct: 470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query: 207 FNDVLKSTRAQL 218
           F  V+K  ++QL
Sbjct: 530 FPLVIKKLKSQL 541

Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 98.6 bits (244), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 14/187 (7%)

Query: 45  RRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGA 104
           + ++ + K+ +D +  +H+ +L  LW A  PD      +S +W  +G+QG DP+TDFRG 
Sbjct: 108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGM 167

Query: 105 GFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPR 164
           G + L+NL++F+   S   + +L+    K     YPFA+ G+NIT +++ ++D    K  
Sbjct: 168 GILGLDNLIYFSTQHSEDAREILKNSNSKCC---YPFAITGINITALVLNLIDKPHFKIY 224

Query: 165 TFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNA-TYMEFNDVLKSTRAQLERELL 223
            F     L         F+ LY + F+  D+ +  +   + MEFN + K    ++ +   
Sbjct: 225 FFKNGSTLTQ-------FNELYSLVFISFDRFYQSKKPKSIMEFNTIKKEFETKISQN-- 275

Query: 224 MDDVLQI 230
             D++Q+
Sbjct: 276 -SDLVQL 281

Dictyostelium discoideum (taxid: 44689)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 11/209 (5%)

Query: 21  VCFKRKGTYERICINLTPQQAERLRRLKHRM----KVYFDASRPDHQEALRALWAATYPD 76
           +C ++  +++ IC+     Q    ++L H +    K  +D++   H++ L  LW+   P 
Sbjct: 83  ICSEKDTSFQ-ICMRTCLLQITGYKQLYHDVENVRKKPYDSANAQHEKMLLKLWSLLMPT 141

Query: 77  QELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAD 136
           ++L   IS QW ++G+QG DP TDFRG G + L NL++F++ +++   ++L +    +  
Sbjct: 142 KKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLG 201

Query: 137 WEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQ 196
             Y +A+ G+N+T M   +L  EA K   +    F+  +   E  F   YC      DK 
Sbjct: 202 --YSYAIVGINLTEMAYSLLKSEALKLHLY---NFVPGVPTME-HFHQFYCYLVYEFDKF 255

Query: 197 WLERNATYMEFNDVLKSTRAQLERELLMD 225
           WLE     + + ++ +    +  + LLMD
Sbjct: 256 WLEEEPESIMYFNLYREKFHERIKGLLMD 284

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 26/203 (12%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   IS QW E+G+QG DP TD
Sbjct: 119 VEKLRREP------YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLL------RKQGGKRADWE---------YPFAVAG 145
           FRG G + L NL +FA+  +T+ Q++L      +     +A+WE         Y FA+ G
Sbjct: 173 FRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVG 232

Query: 146 VNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNAT-Y 204
           +NIT +   +L   A K   +  +     LS     F   +C       K W+E +    
Sbjct: 233 INITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFWIEEDPMDI 288

Query: 205 MEFNDVLKSTRAQLERELLMDDV 227
           MEFN V +  R ++ ++L   D+
Sbjct: 289 MEFNRVREKFRKRIIKQLQNPDM 311

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Pongo abelii (taxid: 9601)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 6/171 (3%)

Query: 55  FDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLF 114
           +D+    H+E L  LW    P ++L+  IS QW E+G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 115 FAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQM 174
           F++ +++   ++L +    +    Y +A+ G+N+T M   +L  EA K   +     +  
Sbjct: 180 FSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPT 237

Query: 175 LSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMD 225
           +      F   YC      DK W E     + + ++ +    +  + LL+D
Sbjct: 238 MEH----FHQFYCYLVYEFDKFWFEEEPESIMYFNLYREKFHEKIKGLLLD 284

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1

 Score = 90.9 bits (224), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 26/203 (12%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   IS QW E+G+QG DP TD
Sbjct: 119 VEKLRRES------YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLL------RKQGGKRADWE---------YPFAVAG 145
           FRG G + L NL +FA+  + + Q++L      +     +A+WE         Y FA+ G
Sbjct: 173 FRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVG 232

Query: 146 VNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNAT-Y 204
           +NIT +   +L   A K   +  +     LS     F   +C       K W+E +    
Sbjct: 233 INITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFWIEEDPMDI 288

Query: 205 MEFNDVLKSTRAQLERELLMDDV 227
           MEFN V +  R ++ ++L   D+
Sbjct: 289 MEFNRVREKFRKRIIKQLQNPDM 311

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 6/171 (3%)

Query: 55  FDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLF 114
           +D+    H++ L  LW    P ++L   IS QW ++G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEKLLIKLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 115 FAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQM 174
           F++ +++   ++L +    +    Y +A+ G+N+T M   +L  EA K   F    F+  
Sbjct: 180 FSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALK---FHLYNFVPG 234

Query: 175 LSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMD 225
           +   E  F   YC      DK W E     + + +V +    +  + LL+D
Sbjct: 235 IPTME-HFHQFYCYLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLLD 284

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2 SV=3

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 34/211 (16%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   IS QW E+G+QG DP TD
Sbjct: 119 VEKLRR------EAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLL------------RKQGGK--RADWE-------- 138
           FRG G + L NL +FA+  +T+ Q++L            +++  K  +A+WE        
Sbjct: 173 FRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAI 232

Query: 139 -YPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQW 197
            Y FA+ G+NIT +   +L   A K   +  +     LS     F   +C       K W
Sbjct: 233 GYSFAIVGINITDLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFW 288

Query: 198 LERNAT-YMEFNDVLKSTRAQLERELLMDDV 227
           +E +    MEFN V +  R ++ ++L   D+
Sbjct: 289 IEEDPMDIMEFNRVREKFRKRIIKQLQNPDM 319

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Homo sapiens (taxid: 9606)

>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 6/175 (3%)

Query: 40  QAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPST 99
           Q  +++ L    K  ++   P HQ  L  LW+  +P+Q       + W+ +G+Q KDPS+
Sbjct: 286 QCHKIQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQ-RSHENWQIIGFQNKDPSS 344

Query: 100 DFRGAGFISLENLLFFAKTFSTSFQR-LLRKQGGKRADWEYPFAVAGVNITFMLMQMLD- 157
           DFRG G   L++L++ A+     F   L+ +Q    A++ YP+A +G+ +T  L++ +  
Sbjct: 345 DFRGMGLAGLKHLIYLAQNHKDMFMNPLINRQ--PEANY-YPYATSGIQVTSFLVECVKP 401

Query: 158 LEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLK 212
           +  +   + V      +L ++E A + +YCV   +    W + NATYM F  V +
Sbjct: 402 INISANHSDVIGQIYPILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
255547738	259	ELMO domain-containing protein, putative	1.0	0.926	0.895	1e-129
224110714	239	predicted protein [Populus trichocarpa]	0.987	0.991	0.873	1e-122
449435069	276	PREDICTED: ELMO domain-containing protei	0.987	0.858	0.860	1e-121
225425436	301	PREDICTED: ELMO domain-containing protei	0.987	0.787	0.890	1e-119
297738445	269	unnamed protein product [Vitis vinifera]	0.987	0.881	0.890	1e-119
253761537	249	hypothetical protein SORBIDRAFT_0019s004	0.987	0.951	0.818	1e-117
194693986	287	unknown [Zea mays] gi|413920846|gb|AFW60	0.983	0.822	0.817	1e-116
108864397	285	phagocytosis and cell motility protein E	0.987	0.831	0.810	1e-116
115485527	250	Os11g0483900 [Oryza sativa Japonica Grou	0.987	0.948	0.810	1e-116
297841427	304	predicted protein [Arabidopsis lyrata su	0.991	0.782	0.816	1e-114

>gi|255547738|ref|XP_002514926.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223545977|gb|EEF47480.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/240 (89%), Positives = 233/240 (97%)

Query: 1   MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRP 60
           + +DDATCGTPTWIGKGLTCVCFKRKG YERICINLTP Q ERL+RL+HRMK+YFDASRP
Sbjct: 20  LSSDDATCGTPTWIGKGLTCVCFKRKGAYERICINLTPHQEERLKRLRHRMKIYFDASRP 79

Query: 61  DHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 120
           DHQEALRALW+ATYPDQ+L GLISDQWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFS
Sbjct: 80  DHQEALRALWSATYPDQQLRGLISDQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFS 139

Query: 121 TSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEW 180
           TSFQRLL+KQGGKR+ WEYPFAVAGVN+TFM+MQMLDL+A+KPRTFVRSVFLQMLS+NEW
Sbjct: 140 TSFQRLLKKQGGKRSAWEYPFAVAGVNVTFMIMQMLDLDASKPRTFVRSVFLQMLSENEW 199

Query: 181 AFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS 240
           AFDLLYCVAFVVMDKQWLERNATYMEFNDVLK TRAQ+ERELLMDDVL+IE+MPSYSLLS
Sbjct: 200 AFDLLYCVAFVVMDKQWLERNATYMEFNDVLKCTRAQVERELLMDDVLRIEDMPSYSLLS 259

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110714|ref|XP_002315612.1| predicted protein [Populus trichocarpa] gi|222864652|gb|EEF01783.1| predicted protein [Populus trichocarpa]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/238 (87%), Positives = 227/238 (95%), Gaps = 1/238 (0%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           ADDATCG+PTWIGKGLTCVCFKRKG YERICINLTPQQA+RL+RLK RMKVYFDASRP+H
Sbjct: 1   ADDATCGSPTWIGKGLTCVCFKRKGAYERICINLTPQQAKRLKRLKDRMKVYFDASRPEH 60

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFR-GAGFISLENLLFFAKTFST 121
           Q+ALRALW+ATYPD+EL GLISDQWKEMGWQG+DPSTDFR GAGF+SLENL+FFAKTFS 
Sbjct: 61  QDALRALWSATYPDRELSGLISDQWKEMGWQGRDPSTDFRLGAGFLSLENLVFFAKTFSI 120

Query: 122 SFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWA 181
           SFQ LLRKQGGKR+ WEYPFAVAGVNITFM+MQMLDL+A KPRTFVR VFLQ+LS++EWA
Sbjct: 121 SFQHLLRKQGGKRSAWEYPFAVAGVNITFMIMQMLDLDAMKPRTFVRPVFLQILSESEWA 180

Query: 182 FDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           FDLLYCVAFVVMD QWL RNATYMEFNDVLKSTRAQ+ERELLMDDVL+IE+MPSYSLL
Sbjct: 181 FDLLYCVAFVVMDNQWLHRNATYMEFNDVLKSTRAQVERELLMDDVLRIEDMPSYSLL 238

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435069|ref|XP_004135318.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus] gi|449494913|ref|XP_004159681.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  438 bits (1127), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/237 (86%), Positives = 222/237 (93%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +D  TCGTPTWIGKG+TC+CFKRKG+ ERICINLTP Q +RLRRLKHRMKVYFD SR +H
Sbjct: 34  SDYVTCGTPTWIGKGITCICFKRKGSLERICINLTPVQEDRLRRLKHRMKVYFDGSRINH 93

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEALRALW A YP QEL  L+SDQWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFSTS
Sbjct: 94  QEALRALWYAAYPGQELQALVSDQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSTS 153

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAF 182
           FQ LLRKQGGK A WEYPFAVAGVNITFM+MQMLDL+A+KPRTF+RSVFLQMLS+NEWAF
Sbjct: 154 FQLLLRKQGGKPAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFIRSVFLQMLSENEWAF 213

Query: 183 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLE+ELLM+DVL+IE+MPSY+LL
Sbjct: 214 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLEKELLMEDVLRIEDMPSYNLL 270

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425436|ref|XP_002271815.1| PREDICTED: ELMO domain-containing protein A-like [Vitis vinifera]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/237 (89%), Positives = 228/237 (96%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +DD TCGTPTWIG+GLTCVCFKRKGTYERICINLTP Q ERLRRL+HRMKVYFDASRPDH
Sbjct: 64  SDDVTCGTPTWIGRGLTCVCFKRKGTYERICINLTPHQEERLRRLRHRMKVYFDASRPDH 123

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEALRALW+ATYP QELHGLIS+QWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 124 QEALRALWSATYPGQELHGLISEQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSIS 183

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAF 182
           FQ LL+KQ GKRA WEYPFAVAGVNITFM+MQMLDL+A+KPRTFVR+VFLQMLS+NEWAF
Sbjct: 184 FQLLLKKQRGKRAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFVRAVFLQMLSENEWAF 243

Query: 183 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           DLLYCVAF+VMDKQWL+RNATYMEFNDVLKSTRAQLE+ELLMDDVL+IE+MPSY LL
Sbjct: 244 DLLYCVAFMVMDKQWLDRNATYMEFNDVLKSTRAQLEKELLMDDVLRIEDMPSYGLL 300

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738445|emb|CBI27646.3| unnamed protein product [Vitis vinifera]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/237 (89%), Positives = 228/237 (96%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +DD TCGTPTWIG+GLTCVCFKRKGTYERICINLTP Q ERLRRL+HRMKVYFDASRPDH
Sbjct: 32  SDDVTCGTPTWIGRGLTCVCFKRKGTYERICINLTPHQEERLRRLRHRMKVYFDASRPDH 91

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEALRALW+ATYP QELHGLIS+QWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 92  QEALRALWSATYPGQELHGLISEQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSIS 151

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAF 182
           FQ LL+KQ GKRA WEYPFAVAGVNITFM+MQMLDL+A+KPRTFVR+VFLQMLS+NEWAF
Sbjct: 152 FQLLLKKQRGKRAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFVRAVFLQMLSENEWAF 211

Query: 183 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           DLLYCVAF+VMDKQWL+RNATYMEFNDVLKSTRAQLE+ELLMDDVL+IE+MPSY LL
Sbjct: 212 DLLYCVAFMVMDKQWLDRNATYMEFNDVLKSTRAQLEKELLMDDVLRIEDMPSYGLL 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|253761537|ref|XP_002489147.1| hypothetical protein SORBIDRAFT_0019s004720 [Sorghum bicolor] gi|241947246|gb|EES20391.1| hypothetical protein SORBIDRAFT_0019s004720 [Sorghum bicolor]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 194/237 (81%), Positives = 225/237 (94%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           A++A+CG+P WIG+GL+CVC KRKGTYERIC+NLTP Q ERL+RLKHRMKVYFD SR DH
Sbjct: 12  ANEASCGSPRWIGRGLSCVCIKRKGTYERICMNLTPVQEERLQRLKHRMKVYFDPSRRDH 71

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 72  QEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSAS 131

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAF 182
           FQRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR++F+QMLS++EWAF
Sbjct: 132 FQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAIFIQMLSEDEWAF 191

Query: 183 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           DLLYCVAFVVMDKQWL++NA+YM+FN+VLKSTRAQLEREL++DDV++IE+MPSYSLL
Sbjct: 192 DLLYCVAFVVMDKQWLDKNASYMDFNEVLKSTRAQLERELMLDDVIRIEDMPSYSLL 248

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194693986|gb|ACF81077.1| unknown [Zea mays] gi|413920846|gb|AFW60778.1| hypothetical protein ZEAMMB73_514808 [Zea mays]

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 193/236 (81%), Positives = 222/236 (94%)

Query: 4   DDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQ 63
           D+ +CG+P WIG+GL+CVC KRKGTYERIC+NLTP Q ERL+RLKHRMKVYFD SR DHQ
Sbjct: 51  DETSCGSPRWIGRGLSCVCIKRKGTYERICMNLTPVQEERLQRLKHRMKVYFDPSRRDHQ 110

Query: 64  EALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSF 123
           EAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS SF
Sbjct: 111 EALKALWHATYPDQELEGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSASF 170

Query: 124 QRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFD 183
           QRLL KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR++F+QMLS++EWAFD
Sbjct: 171 QRLLNKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAIFIQMLSEDEWAFD 230

Query: 184 LLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           LLYCVAFVVMDKQWL++NA+YM+FN+VLKSTRAQLEREL++DDV++IE+MPSYSLL
Sbjct: 231 LLYCVAFVVMDKQWLDKNASYMDFNEVLKSTRAQLERELMLDDVIRIEDMPSYSLL 286

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|108864397|gb|ABA93689.2| phagocytosis and cell motility protein ELMO1, putative, expressed [Oryza sativa Japonica Group] gi|218185744|gb|EEC68171.1| hypothetical protein OsI_36117 [Oryza sativa Indica Group] gi|222615973|gb|EEE52105.1| hypothetical protein OsJ_33903 [Oryza sativa Japonica Group]

 Score =  422 bits (1085), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 192/237 (81%), Positives = 222/237 (93%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +D+A+CG+P WIGK L+CVC KRKG YERIC+NLTP Q ERL+RL+HRMKVYFD SR DH
Sbjct: 48  SDEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDH 107

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 108 QEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSAS 167

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAF 182
           FQRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR+VF+QMLS++EWAF
Sbjct: 168 FQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLSEDEWAF 227

Query: 183 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           DLLYCVAFVVMDKQWL++NA+YM+FN++LKSTR QLERELL+DDV++IE+MPSYSLL
Sbjct: 228 DLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 284

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115485527|ref|NP_001067907.1| Os11g0483900 [Oryza sativa Japonica Group] gi|108864396|gb|ABG22490.1| phagocytosis and cell motility protein ELMO1, putative, expressed [Oryza sativa Japonica Group] gi|113645129|dbj|BAF28270.1| Os11g0483900 [Oryza sativa Japonica Group] gi|215687310|dbj|BAG91897.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 192/237 (81%), Positives = 222/237 (93%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           A++A+CG+P WIGK L+CVC KRKG YERIC+NLTP Q ERL+RL+HRMKVYFD SR DH
Sbjct: 13  ANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDH 72

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 73  QEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSAS 132

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAF 182
           FQRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR+VF+QMLS++EWAF
Sbjct: 133 FQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLSEDEWAF 192

Query: 183 DLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
           DLLYCVAFVVMDKQWL++NA+YM+FN++LKSTR QLERELL+DDV++IE+MPSYSLL
Sbjct: 193 DLLYCVAFVVMDKQWLDKNASYMDFNEILKSTRTQLERELLLDDVMRIEDMPSYSLL 249

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841427|ref|XP_002888595.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297334436|gb|EFH64854.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/240 (81%), Positives = 219/240 (91%), Gaps = 2/240 (0%)

Query: 3   ADDATCG-TPTW-IGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRP 60
           A+DA+C  TP+W I K LTCVCF RK  YERIC NLTP Q ERL+RL+ RMK YFDASRP
Sbjct: 65  AEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYFDASRP 124

Query: 61  DHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 120
           DHQ+ALRALW+ATYP ++L  LISDQWK MGWQGKDPSTDFRGAGFISLENLLFFAKTFS
Sbjct: 125 DHQDALRALWSATYPSEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 184

Query: 121 TSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEW 180
           TSFQRLL+KQGGKRA WEYPFAVAGVNITFM+MQMLDLEA+KPR+F+R VFLQMLS+NEW
Sbjct: 185 TSFQRLLKKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSENEW 244

Query: 181 AFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS 240
           AFDLLYCVAFVVMDKQWL++NATYMEFNDVL+STR QLE+EL+MDDV +IE+MPS+SLLS
Sbjct: 245 AFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRSTRGQLEKELMMDDVFRIEDMPSFSLLS 304

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.991	0.846	0.812	1.1e-105
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	0.983	0.887	0.622	2e-81
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	0.983	0.887	0.618	6e-80
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.962	0.715	0.594	7e-70
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.95	0.860	0.568	4.4e-68
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.570	0.643	0.808	7.3e-59
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.466	0.114	0.389	1.1e-25
DICTYBASE|DDB_G0282949	618	elmoC "engulfment and cell mot	0.733	0.284	0.343	1.2e-24
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.720	0.609	0.283	6.2e-24
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.687	0.522	0.323	3.4e-22

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
 Identities = 195/240 (81%), Positives = 218/240 (90%)

Query:     3 ADDATCG-TPTW-IGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRP 60
             A+DA+C  TP+W I K LTCVCF RK  YERIC NLTP Q ERL+RL+ RMK Y+DASRP
Sbjct:    42 AEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRP 101

Query:    61 DHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 120
             DHQ+ALRALW+ATYPD++L  LISDQWK MGWQGKDPSTDFRGAGFISLENLLFFAKTFS
Sbjct:   102 DHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 161

Query:   121 TSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEW 180
             TSFQRLL KQGGKRA WEYPFAVAGVNITFM+MQMLDLEA+KPR+F+R VFLQMLS++EW
Sbjct:   162 TSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEW 221

Query:   181 AFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS 240
             AFDLLYCVAFVVMDKQWL++NATYMEFNDVL+ TR QLEREL+MDDV +IE+MPS+SLLS
Sbjct:   222 AFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLLS 281

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
 Identities = 147/236 (62%), Positives = 192/236 (81%)

Query:     5 DATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQE 64
             +A  G+  W+G+GL+CVC +R+ +      +LTP Q E L+ L++R+ V +D++ P HQE
Sbjct:    30 EAVPGSAAWLGRGLSCVCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYDSTIPLHQE 89

Query:    65 ALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQ 124
             ALR LW  ++P++ELHGLIS+QWKEMGWQGKDPSTDFRG GFISLENLL+FA+ F  SFQ
Sbjct:    90 ALRELWKLSFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFQKSFQ 149

Query:   125 RLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDL 184
              LLRKQ G R+ WEYPFAVAG+N+TFML+QMLDLEA KPRT V + FL+ LS+NE AFDL
Sbjct:   150 DLLRKQVGDRSVWEYPFAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLSENESAFDL 209

Query:   185 LYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS 240
             LYC+AF +MD+QWL   A+YMEFN V+KSTR QLEREL+++D++ +E++PSY+LL+
Sbjct:   210 LYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLERELMLEDIMHLEDLPSYALLN 265

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 146/236 (61%), Positives = 185/236 (78%)

Query:     5 DATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQE 64
             +   G+  W+G+GL+CVC + +    R   +LTP Q E L+RL+ R+ V +D+S P HQE
Sbjct:    30 EVVAGSAAWLGRGLSCVCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYDSSIPQHQE 89

Query:    65 ALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQ 124
             AL+ LW   +P++ELHG++SDQWKEMGWQGKDPSTDFRG GFISLENLL+FA+ F  SF 
Sbjct:    90 ALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFARKFPKSFH 149

Query:   125 RLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDL 184
              LLRKQ G R+ WEYPFAVAG+NITFML+QMLDLEA KPR+ V   FL+ LS NE AFDL
Sbjct:   150 GLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLSVNESAFDL 209

Query:   185 LYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLLS 240
             LYC+AF +MD+QWL   A+YMEFN V+KSTR QLERE++++D+  +E++PSYSLLS
Sbjct:   210 LYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLEDLPSYSLLS 265

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 138/232 (59%), Positives = 173/232 (74%)

Query:     9 GTPTWIGKGLTCVCFKRKGTYERICIN-LTPQQAERLRRLKHRMKVYFDASRPDHQEALR 67
             G+ + +G+ L+   F + GT  R+    L+  Q ERLR +K R+++ FD SR +HQ+ALR
Sbjct:    90 GSGSLVGRFLSLPTFGQIGTGGRLLPPPLSMLQEERLRNIKRRIEIPFDGSRMEHQDALR 149

Query:    68 ALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLL 127
              LW   YP +EL  L S+ WKEMGWQG DPSTDFRG G+ISLENL+FFAKT+  SFQRLL
Sbjct:   150 QLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPESFQRLL 209

Query:   128 RKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYC 187
              KQ G RA+WEYPFAVAG+NI+FML QMLDL++ KP T     FL  L ++E AFD LYC
Sbjct:   210 HKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMAFDNLYC 269

Query:   188 VAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
             +AF +MD QWL R A+YMEFNDVLKSTRAQLEREL +DDV  I ++P+++LL
Sbjct:   270 IAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAFNLL 321

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 132/232 (56%), Positives = 178/232 (76%)

Query:     9 GTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRA 68
             GT +WIG GL     +R+   + +   L+P Q ERL+RL+ RM V FD +RPDHQE+L+A
Sbjct:    35 GTRSWIG-GLFTRSNRRQD--KAVDYTLSPLQEERLQRLQDRMVVPFDETRPDHQESLKA 91

Query:    69 LWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLR 128
             LW   +P+  L GL+++QWKEMGWQG +PSTDFRG GFI+LENLLF A+T+   F+RLL 
Sbjct:    92 LWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVCFRRLLL 151

Query:   129 KQGGKRADWEYPFAVAGVNITFMLMQMLDLEAT-KPRTFVRSVFLQMLSDNEWAFDLLYC 187
             KQ G RA WEYPFAVAG+NI+FML+QMLDL+   KP+      FL++L ++E AFD+LYC
Sbjct:   152 KQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERAFDVLYC 211

Query:   188 VAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPSYSLL 239
             +AF +MD QWL  +A+YMEFN+VL++TR QLEREL +DD+ +I+++P+Y+LL
Sbjct:   212 IAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 114/141 (80%), Positives = 127/141 (90%)

Query:    72 ATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQG 131
             +TY D++L  LISDQWK MGWQ KDPSTDFRG GFISLENL FFAKTFS    RLL+KQG
Sbjct:    71 STYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENLRFFAKTFS----RLLKKQG 126

Query:   132 GKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFV 191
             GKRA WEYPFAVAGVNITFM+MQMLDLEA+KPR+F+R VFLQMLS++EWAF LLYCVAFV
Sbjct:   127 GKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFGLLYCVAFV 186

Query:   192 VMDKQWLERNATYMEFNDVLK 212
             VMDKQWL++NATYMEFNDVL+
Sbjct:   187 VMDKQWLDKNATYMEFNDVLR 207

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 240 (89.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
 Identities = 44/113 (38%), Positives = 70/113 (61%)

Query:    40 QAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPST 99
             Q  R + + +R  V F+    +H   L  LW+ TYP  +L   +S+QWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   100 DFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFML 152
             DFR  G   L+NL++FA+ ++  F++++  Q  ++ + EYP A AG+ +TF L
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRK-EREYPTATAGIVLTFEL 473

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0282949 elmoC "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 289 (106.8 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 66/192 (34%), Positives = 110/192 (57%)

Query:    36 LTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGK 95
             +T +Q++ ++ L  +    ++++ PDH+E L+ LW+  YP+QE     S  WK+ G+Q  
Sbjct:   357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query:    96 DPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNIT---FML 152
             DP+ DFRG G + L NL+   +  +   Q +L +      D +YPFAVAG+NI+   F +
Sbjct:   416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ------DRDYPFAVAGINISNLIFEV 469

Query:   153 MQMLDLEATKP--RTFVRSVFLQMLSD----NEWAFDLLYCVAFVVMDKQWLERNATYME 206
              Q+ +    +P   +F  S ++ ML      N+ AF+ LY + F ++D  W++ NATYM 
Sbjct:   470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query:   207 FNDVLKSTRAQL 218
             F  V+K  ++QL
Sbjct:   530 FPLVIKKLKSQL 541

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 249 (92.7 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
 Identities = 53/187 (28%), Positives = 99/187 (52%)

Query:    45 RRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGA 104
             + ++ + K+ +D +  +H+ +L  LW A  PD      +S +W  +G+QG DP+TDFRG 
Sbjct:   108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGM 167

Query:   105 GFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPR 164
             G + L+NL++F+   S   + +L+    K     YPFA+ G+NIT +++ ++D    KP 
Sbjct:   168 GILGLDNLIYFSTQHSEDAREILKNSNSKCC---YPFAITGINITALVLNLID----KPH 220

Query:   165 TFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNA-TYMEFNDVLKSTRAQLERELL 223
              F   ++          F+ LY + F+  D+ +  +   + MEFN + K    ++ +   
Sbjct:   221 -F--KIYFFKNGSTLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKKEFETKISQN-- 275

Query:   224 MDDVLQI 230
               D++Q+
Sbjct:   276 -SDLVQL 281

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 57/176 (32%), Positives = 93/176 (52%)

Query:    45 RRLKHRMKVY----FDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
             RRL H+++      +D+   DH++ L  LW    PD  L G ++ QW+++G+QG DP TD
Sbjct:   120 RRLMHQVEQLRAEKYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTD 179

Query:   101 FRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEA 160
             FRG G + LENLL+FA  ++ + + +L           Y +A+ G+N+T M   ++   A
Sbjct:   180 FRGMGMLGLENLLYFATAYNDAAKHVLLHS--MHPTLGYTYAIVGINLTSMAFNLVKTGA 237

Query:   161 TKPRTFVRSVFLQMLSDNEWAFDL--LYCVAFVVMDKQWLERNA-TYMEFNDVLKS 213
              K  T   ++ +Q   D     D   LYC  F   D+ W+E +    M+F ++ +S
Sbjct:   238 AK--THFYNLVVQHRQDFSTVEDFHKLYCYLFFEFDRFWMESDPRNIMDFREIYQS 291

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.X.4780.1 hypothetical protein (236 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	240
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	3e-69

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  209 bits (535), Expect = 3e-69
 Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 1/171 (0%)

Query: 42  ERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDF 101
             L  L+   K  FD   P+H+  L+ LW A +PD+ L   +S++WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 102 RGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEAT 161
           RG G + L NLL+FA+ +   FQ+LL +   + A+ EYPFAVA +N+T ML ++L +   
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 162 KPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLK 212
               +    F  +      AF+ LYC  F + D+ W E  AT M+FN VL+
Sbjct: 121 DQEDYKNYGF-PLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	100.0

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=6e-64  Score=442.52  Aligned_cols=232  Identities=53%  Similarity=0.890  Sum_probs=218.9

Q ss_pred             Cccccccccchhhhc-----cccccccccCCCcccccccCCHHHHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHhCCC
Q 026332            2 CADDATCGTPTWIGK-----GLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPD   76 (240)
Q Consensus         2 ~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~L~~~Q~~~L~~l~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~   76 (240)
                      ++++...|+.+|+|+     ++.|.|.+.+..+..++....+.|.+.++.+++++++|||.+|++|+++|.+||+.++|+
T Consensus        64 ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~~~~~~yDs~n~~H~e~L~~lwk~~~p~  143 (302)
T KOG2998|consen   64 ASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEELRQEPYDSDNPDHEELLLDLWKLLYPD  143 (302)
T ss_pred             cccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHhCCC
Confidence            578999999999999     999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCchhhhhhccCCCCCCCCccchhhhhHhhHHHHHhhChHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHh
Q 026332           77 QELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQML  156 (240)
Q Consensus        77 ~~~~~~~~~~Wk~lGFQ~~dP~tDFRg~G~LgL~~LlyF~~~~~~~~~~ll~~q~~~~~~~~yPfA~~sIniT~~L~~~L  156 (240)
                      +++++++|++|++|||||+||+|||||+|+|||+||+||+++||+.+++++.+|.  ++.|+|||||||||||+|++++|
T Consensus       144 ~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~s~--~~r~eYpfAVvgINIT~m~~qmL  221 (302)
T KOG2998|consen  144 KELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLKSR--HPRWEYPFAVVGINITFMAIQML  221 (302)
T ss_pred             CccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHhcC--CCccCCceEEEeecHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999985  45699999999999999999999


Q ss_pred             hhhcCCCCc-chhhhhhhcccCchhhHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHhhccCCCCCCCCCCC
Q 026332          157 DLEATKPRT-FVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEMPS  235 (240)
Q Consensus       157 ~~~~~~~~~-~~~~~f~~ll~~~~~~F~ely~~~f~~f~~~W~~~~at~~dF~~V~~~~r~ql~~~L~~~~~~~v~d~~~  235 (240)
                      +.++.+.+. .....|     +++.+|+.|||++|..||+.|+++++||||||.|++++|.|++++|...++..++|+|+
T Consensus       222 ~~eal~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~simefn~Vlk~~~~qler~L~~~d~~~~~~lp~  296 (302)
T KOG2998|consen  222 DLEALKKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRATIMEFNTVLKSFRRQLERELSLDDVLLITDLPA  296 (302)
T ss_pred             Hhhhcccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhhhhhhhcccccchh
Confidence            999875443 333333     77899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC
Q 026332          236 YSLLS  240 (240)
Q Consensus       236 ~~~~~  240 (240)
                      |++|.
T Consensus       297 ~~~L~  301 (302)
T KOG2998|consen  297 FNLLL  301 (302)
T ss_pred             hhhhc
Confidence            99984

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=4e-50  Score=335.16  Aligned_cols=168  Identities=41%  Similarity=0.773  Sum_probs=151.4

Q ss_pred             HHHHHHHhhccccCCCCHHHHHHHHHHHHHhCCCcccCCCCchhhhhhccCCCCCCCCccchhhhhHhhHHHHHhhChHH
Q 026332           43 RLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS  122 (240)
Q Consensus        43 ~L~~l~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQ~~dP~tDFRg~G~LgL~~LlyF~~~~~~~  122 (240)
                      .|+.|++++++|||++|++|+++|++||++++++.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||+.
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            57889999999999999999999999999999988888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcCCCCcchhhhhhhc-ccCchhhHHHHHHHHHHHHHHHHHhCC
Q 026332          123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQM-LSDNEWAFDLLYCVAFVVMDKQWLERN  201 (240)
Q Consensus       123 ~~~ll~~q~~~~~~~~yPfA~~sIniT~~L~~~L~~~~~~~~~~~~~~f~~l-l~~~~~~F~ely~~~f~~f~~~W~~~~  201 (240)
                      +++++.++.++.+..+||||+||||||.+|+++|+.+.....  ....+... +++.+.+|++|||++|+.|+++|++++
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~f~elf~~~f~~f~~~W~~~~  159 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGALDSE--FYKRINFLSFFSSLEAFEELFCACFQLFDRTWKEMN  159 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhcccCHH--HhhcccccccCccHHHHHHHHHHHHHHHHHHHccCC
Confidence            999999998776668999999999999999999999764321  22222222 567789999999999999999999999


Q ss_pred             CChhhHHHHHH
Q 026332          202 ATYMEFNDVLK  212 (240)
Q Consensus       202 at~~dF~~V~~  212 (240)
                      +|+|||++|++
T Consensus       160 at~~dF~~V~~  170 (170)
T PF04727_consen  160 ATIMDFNKVLK  170 (170)
T ss_pred             CCHHHHHhhcC
Confidence            99999999975

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=272.61  Aligned_cols=198  Identities=23%  Similarity=0.468  Sum_probs=183.3

Q ss_pred             cccCCHHHHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHhCCCccc-----------CCCCchhhhhhccCC-CCCCCC
Q 026332           33 CINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQEL-----------HGLISDQWKEMGWQG-KDPSTD  100 (240)
Q Consensus        33 ~~~L~~~Q~~~L~~l~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~~~~Wk~lGFQ~-~dP~tD  100 (240)
                      .++|+.+|...+..+..|+.++.|+.+++.++.++.+-..+|..+.-           .....+..|++||.+ .||+.|
T Consensus       275 ~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~d  354 (713)
T KOG2999|consen  275 PIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQD  354 (713)
T ss_pred             hHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHh
Confidence            35899999999999999999999999999999999999999976432           235578999999999 999999


Q ss_pred             cc--chhhhhHhhHHHHHhhChHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcCCCCcchhhhhhhcccCc
Q 026332          101 FR--GAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSDN  178 (240)
Q Consensus       101 FR--g~G~LgL~~LlyF~~~~~~~~~~ll~~q~~~~~~~~yPfA~~sIniT~~L~~~L~~~~~~~~~~~~~~f~~ll~~~  178 (240)
                      |-  .+|+|+|+||+||+++||+.+.+++.++++|.+.++|||+..+|.+|++||++|+.+.  ++++...+|.|+||.+
T Consensus       355 f~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge--~p~E~~~df~pmfFth  432 (713)
T KOG2999|consen  355 FGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGE--PPDELDRDFIPMFFTH  432 (713)
T ss_pred             cccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCC--CchhhcCccceeeecC
Confidence            98  7899999999999999999999999999999999999999999999999999999986  4566777899999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 026332          179 EWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRAQLERELLMDDVLQIEEM  233 (240)
Q Consensus       179 ~~~F~ely~~~f~~f~~~W~~~~at~~dF~~V~~~~r~ql~~~L~~~~~~~v~d~  233 (240)
                      +..|+|+||+|.++|+++|++|+||..||++|+.+||+||.|+|..+ ++++++.
T Consensus       433 d~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~f  486 (713)
T KOG2999|consen  433 DTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQF  486 (713)
T ss_pred             CCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHH
Confidence            99999999999999999999999999999999999999999999986 8777764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	240
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 6/34 (17%)

Query: 40 QAERLRRLKHRMKVYFDASRPDHQEALRALWAAT 73
          + + L++L+  +K+Y D S P    AL A+  AT
Sbjct: 18 EKQALKKLQASLKLYADDSAP----AL-AI-KAT 45

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 8e-04
 Identities = 31/267 (11%), Positives = 64/267 (23%), Gaps = 75/267 (28%)

Query: 13  WIGKGLTCVCFKRKGTYE---RICINLTPQQAERLRR----------LKHRMKVYFDASR 59
           W+       C   +   E   ++   + P    R             ++  ++       
Sbjct: 186 WLNLKN---CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL--KS 240

Query: 60  PDHQEAL--------RALWAA---------TYPDQELHGLISDQWKEMGWQGKDPSTDFR 102
             ++  L           W A         T   ++    ++D            S D  
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ----VTDF--LSAATTTHISLDHH 294

Query: 103 GAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDL---- 158
                  E      K      Q  L ++         P  ++   I   +   L      
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQD-LPREVLTTN----PRRLSI--IAESIRDGLATWDNW 347

Query: 159 --EATKPRTFVRSVFLQMLSDNEWAFDLLYCVAFVVMDKQWLERNATYMEFNDVLKSTRA 216
                   T +    L +L   E  +  ++     V              F         
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAE--YRKMF-DRLSV--------------FPPSAHIPTI 390

Query: 217 QLER---ELLMDDVLQI-EEMPSYSLL 239
            L     +++  DV+ +  ++  YSL+
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00