Citrus Sinensis ID: 026352

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccEEEcccccEEEEEEEEEcccEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEcccEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHEHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEccccEEEEEEEEcc
Coil and Loop (DISEMBL)
MILLQICVASVYFLTedsfnqglnphIYVTYRHaagslmmfPFAYFlerkirpkLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFykgpavpslkgapihlgtnsvhenwlKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQpkaaawsttsgIDLWCIIYSVS
Flexible Loop (DISEMBL)
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Low Complexity Region (SEG)
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTlavfleifllsllgvslalnlYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Disordered region (IsUnstruct)
*ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS**
Disordered Region (DISOPRED)
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSL**************NWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Disordered Region (DISEMBL)
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Disordered Region (DISPRO)
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKG**********HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYSVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	240	2.2.26 [Sep-21-2011]
Q501F8	373	WAT1-related protein At4g	yes	no	0.954	0.613	0.390	9e-46
O80638	374	WAT1-related protein At2g	no	no	0.925	0.593	0.387	2e-42
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.991	0.626	0.360	7e-42
Q9SUF1	384	WAT1-related protein At4g	no	no	0.991	0.619	0.352	2e-41
Q9LPF1	370	WAT1-related protein At1g	no	no	0.954	0.618	0.370	1e-40
Q9LXX8	377	WAT1-related protein At3g	no	no	0.991	0.631	0.348	2e-40
F4HZQ7	389	WAT1-related protein At1g	no	no	0.991	0.611	0.334	2e-39
Q9FL41	402	WAT1-related protein At5g	no	no	0.991	0.592	0.352	3e-39
F4IJ08	394	WAT1-related protein At2g	no	no	0.979	0.596	0.345	4e-37
Q6NMB7	343	WAT1-related protein At1g	no	no	0.987	0.690	0.361	2e-35

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  183 bits (465), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 143/238 (60%), Gaps = 9/238 (3%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           +I LQ   A +Y +T  SF  G+N  I  TYRH   ++++ PFA  LERKIRPK+T  +F
Sbjct: 15  IISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKMTWPLF 74

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           L I  L  L   L  NLY+  MK    T+ +A VN +P +TFI+AV+FR+E V+++  R 
Sbjct: 75  LRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETVNLKKTRS 134

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVP-------SLKGAPIHLGTNSVHENWLKGSILTVA 173
           +AK++GT  ++ G MV+  YKGPA+        SL G      + +  +NW+ G++  + 
Sbjct: 135 LAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVTGTLAVMG 194

Query: 174 SCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGID 231
           S   W+ F+I+Q+FTLKKYPA+LS+  W+  +G   + + ++I+    +AW    G+D
Sbjct: 195 SITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAWKV--GMD 250

Arabidopsis thaliana (taxid: 3702)

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 141/227 (62%), Gaps = 5/227 (2%)

Query: 4   LQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEI 63
           LQ   A +  + + + NQG++PH+  +YRH   ++ + PFAYFL+RKIRPK+TL++F +I
Sbjct: 15  LQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLSIFFKI 74

Query: 64  FLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAK 123
            LL LL  ++  NLY+  MKY   TF  A+ N +P   FI+A +FRLE V+V+     AK
Sbjct: 75  LLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKIHSQAK 134

Query: 124 ILGTLASLVGVMVIAFYKGPAVPSLKGAP--IHLGTNS--VHENWLKGSILTVASCILWS 179
           ILGT+ ++ G M++   KGP +P     P  IH  +++  V ++  KG+ L    CI W+
Sbjct: 135 ILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASLIAIGCICWA 194

Query: 180 SFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQ-PKAAAWS 225
            F  +QA TLK YP +LS++A++  +G+ +S +  + ++    +AW+
Sbjct: 195 GFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWA 241

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  170 bits (431), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 147/241 (60%), Gaps = 3/241 (1%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M++LQ+ +A +  L++   N+G++ ++ V YRHA  +++M PFA++ ++K+RPK+TL +F
Sbjct: 19  MVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMTLMIF 78

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
            +I LL LL   +  NLY+  MKY   TF TA+ N +P +TF++A +F LE V +R  R 
Sbjct: 79  FKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCIRS 138

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSL--KGAPIHLGTNSVHENWLKGSILTVASCILW 178
             K++GTLA++ G M++   KGP +     KG   H    +   + +KG++L    C  +
Sbjct: 139 TGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSAIKGAVLVTIGCFSY 198

Query: 179 SSFYIMQAFTLKKYPAKLSISAWMNCIGAAQ-SAVYTIIVQPKAAAWSTTSGIDLWCIIY 237
           + F I+QA TL+ YPA+LS++AW+  +G  + +AV  ++ +   +AW+      L    Y
Sbjct: 199 ACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTATY 258

Query: 238 S 238
           S
Sbjct: 259 S 259

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           MI LQ   A  Y +   + NQG N ++ + YR+   +L++ PFA   ERK+RPK+TL+V 
Sbjct: 17  MIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMTLSVL 76

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
            +I  L  L   L     +  M     T+ +A++N +P +TFIIA + R+E V++   R 
Sbjct: 77  WKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIAEVRS 136

Query: 121 IAKILGTLASLVGVMVIAFYKGPAV------PSLKGAPIHLGTNSVHENWLKGSILTVAS 174
            AKI+GTL  L G +V+  YKGP +      P++     H   +  H NW+ G++L +  
Sbjct: 137 KAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVGTLLILLG 196

Query: 175 CILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWC 234
           C+ WS FY++Q+ T+K YPA LS+SA +   GA QS    ++V+   + W+      L+ 
Sbjct: 197 CVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFA 256

Query: 235 IIYS 238
            +Y+
Sbjct: 257 PLYT 260

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  166 bits (421), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 145/235 (61%), Gaps = 6/235 (2%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           +I LQ   A +Y +T  SF  G++  +  TYRH   +++M PFA   ERKIRPK+TLA+F
Sbjct: 15  IISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKMTLAIF 74

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
             +  L +L   +  NLY+  +K    ++ +A  N +P +TFI+A++FRLE V+ R    
Sbjct: 75  WRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNFRKVHS 134

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGA--PIHLGTNS--VHENWLKGSILTVASCI 176
           +AK++GT+ ++ G M++  YKGPA+  +K A    H G++S    ++W+ G+I  + S  
Sbjct: 135 VAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQHWVLGTIAIMGSIS 194

Query: 177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGID 231
            W++F+I+Q++TLK YPA+LS+   +  IG   +A+ ++I+    +AW    G+D
Sbjct: 195 TWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKI--GMD 247

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LXX8|WTR27_ARATH WAT1-related protein At3g56620 OS=Arabidopsis thaliana GN=At3g56620 PE=2 SV=1

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 146/238 (61%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M+ LQ   A +  +T+   ++G++ ++ V YR+A  +  + PFA   ERK+RPK+T  +F
Sbjct: 15  MVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRPKMTFPIF 74

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           ++IF+L+LLG  +  NLY+A +K   PTF  AV N +P +TFII+++ R+E V++R  R 
Sbjct: 75  MQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPALTFIISIICRMEKVEMRKVRF 134

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSS 180
            AK++GTL  +VG M++  +K P +  L+        +   E++LK ++  + +   W+S
Sbjct: 135 QAKVVGTLVIVVGAMLMILFKIPLITFLRSHLTGHALSPAGEDYLKATVFLLIASFSWAS 194

Query: 181 FYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           F+++QA TLK+Y + LS+S  +  +G  QS   T +++P  +AW+    ++L    Y+
Sbjct: 195 FFVLQAATLKRYSSHLSLSTMVCFMGTLQSTALTFVMEPNLSAWNIGFDMNLLASAYA 252

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  162 bits (411), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 144/251 (57%), Gaps = 13/251 (5%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           MI +Q   A +Y +T  S   G+N ++   YRHA  + ++ PFA F ERKIRPK+T  +F
Sbjct: 15  MISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKMTFRIF 74

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           L+I LL  +   L  NLY+  M Y   TF +A  N +P +TF++A++FRLE V+ +  R 
Sbjct: 75  LQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNFKKVRS 134

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLK-------------GAPIHLGTNSVHENWLKG 167
           IAK++GT+ ++ G +++  YKGP V  ++             G+    G  ++ ++W+ G
Sbjct: 135 IAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDKHWIPG 194

Query: 168 SILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTT 227
           +++ +     W+ F+I+Q+FTLK+YPA+LS++  +  +G  +    +++     +AW   
Sbjct: 195 TLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDLSAWKIG 254

Query: 228 SGIDLWCIIYS 238
              +L+   YS
Sbjct: 255 FDSNLFAAAYS 265

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  161 bits (408), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 147/250 (58%), Gaps = 12/250 (4%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           MI LQ   A +  +T+ S N G++ ++ V YRHA  + ++ PFA+F ERK +PK+T ++F
Sbjct: 22  MISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIF 81

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           +++F+L LLG  +  N Y+  +KY  PTF  A+ N +P MTFI+AV+FR+E++D++    
Sbjct: 82  MQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWC 141

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNS-----------VHENWLKGSI 169
            AKI GT+ ++ G M++  YKGP V       +H+  +S             + +LKGSI
Sbjct: 142 QAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKEFLKGSI 201

Query: 170 LTVASCILWSSFYIMQAFTLKKYPA-KLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTS 228
           L + + + W+S +++QA  LK Y   +LS++  +  IG  Q+   T +++   +AW    
Sbjct: 202 LLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRIGW 261

Query: 229 GIDLWCIIYS 238
            ++L    YS
Sbjct: 262 DMNLLAAAYS 271

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 144/240 (60%), Gaps = 5/240 (2%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M+ LQ   A +  +T+   ++G++ ++ V YR+A  +  + PFA   ERK+R K+T  +F
Sbjct: 15  MVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKMTFPIF 74

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           + IFLL+LLG  +  NLY+  +K   PTF +AV N +P +T I+A +FR+E V++R  R 
Sbjct: 75  MRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMRKVRC 134

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV--HENWLKGSILTVASCILW 178
           + K++GTL ++VG +++ FYKGP +   +    HL   S     ++LK ++  + + + W
Sbjct: 135 LVKVMGTLVTVVGSILMIFYKGPFINFFRS---HLTAASSPPTADYLKAAVFLLLASLSW 191

Query: 179 SSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           +SF+++QA TLKKY A LS+S  +  +G  QS     +++   +A +    ++L    Y+
Sbjct: 192 ASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNLLASAYA 251

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NMB7|WTR7_ARATH WAT1-related protein At1g43650 OS=Arabidopsis thaliana GN=At1g43650 PE=2 SV=1

 Score =  149 bits (376), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 140/238 (58%), Gaps = 1/238 (0%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M+ +QI  A +  L++ + +QG NP ++V YR A  +L + PFA+FLE      L+  + 
Sbjct: 11  MVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPLSFILL 70

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           L+IF +SL G++L+LNLY+ +++    TF  A  N IP +TF++A++FRLE V ++   G
Sbjct: 71  LKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRLETVTLKKSHG 130

Query: 121 IAKILGTLASLVGVMVIAFYKGPA-VPSLKGAPIHLGTNSVHENWLKGSILTVASCILWS 179
           +AK+ G++  ++G +V AF KGP+ +     + I  GT    +N +KGSI  +A+   W 
Sbjct: 131 VAKVTGSMVGMLGALVFAFVKGPSLINHYNSSTIPNGTVPSTKNSVKGSITMLAANTCWC 190

Query: 180 SFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIY 237
            + IMQ+  +K+YPAKL + A        QSAV+ + V    + W    G+ L  + Y
Sbjct: 191 LWIIMQSKVMKEYPAKLRLVALQCLFSCIQSAVWAVAVNRNPSVWKIEFGLPLLSMAY 248

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
255583214	368	Auxin-induced protein 5NG4, putative [Ri	0.991	0.646	0.575	4e-82
297744123	364	unnamed protein product [Vitis vinifera]	0.991	0.653	0.605	1e-81
255576820	370	Auxin-induced protein 5NG4, putative [Ri	0.991	0.643	0.583	2e-80
225433049	368	PREDICTED: auxin-induced protein 5NG4 [V	0.991	0.646	0.619	2e-79
357114030	367	PREDICTED: auxin-induced protein 5NG4-li	0.991	0.648	0.569	8e-78
356535430	354	PREDICTED: auxin-induced protein 5NG4 [G	0.991	0.672	0.558	2e-77
242036909	373	hypothetical protein SORBIDRAFT_01g04696	0.991	0.638	0.545	5e-75
356545847	370	PREDICTED: auxin-induced protein 5NG4-li	0.95	0.616	0.557	1e-74
356536823	338	PREDICTED: auxin-induced protein 5NG4-li	0.95	0.674	0.552	1e-74
326522246	381	predicted protein [Hordeum vulgare subsp	0.991	0.624	0.525	5e-74

>gi|255583214|ref|XP_002532372.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223527928|gb|EEF30015.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 137/238 (57%), Positives = 192/238 (80%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           +I +Q   + +YF+TE +F  GLNPH+YVTYR+  G L++ PFA FLERK+RPK+TL +F
Sbjct: 20  LIFVQSSFSLLYFVTEAAFKHGLNPHVYVTYRYVLGCLLVLPFACFLERKVRPKMTLLLF 79

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           LEIF+LSLLG SL LN+YFAS+KY +PTF+T++ N IP MTF+ AV+ RLE+++VR+PRG
Sbjct: 80  LEIFVLSLLGASLTLNMYFASLKYTNPTFVTSMTNAIPSMTFLFAVILRLEVINVRTPRG 139

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSS 180
           +AKI+GTL SL G +V+AFYKGP + SL+GAPIH+ ++ V +NW+KGS L +ASCI WS 
Sbjct: 140 VAKIVGTLMSLAGALVLAFYKGPKMKSLQGAPIHIRSSHVQQNWMKGSFLLLASCITWSL 199

Query: 181 FYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           ++I+Q +TL+KYPA+LS++AW+N +G AQSAV+T+ +Q K  AW+    I+ WCI+Y+
Sbjct: 200 WFILQVYTLRKYPAQLSLTAWINFLGGAQSAVFTLFIQHKPEAWAIKIDINFWCILYA 257

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744123|emb|CBI37093.3| unnamed protein product [Vitis vinifera]

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 183/238 (76%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M+L+  C   +YF  E +FN GLNPH+ VTYRH  G L+MFPFAY LERK+RPKLTLA+F
Sbjct: 27  MVLVHTCYTILYFTAEAAFNHGLNPHVMVTYRHFIGGLVMFPFAYVLERKVRPKLTLALF 86

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
            EIF+LSL G+ L LN+YFAS+ Y  PTF+ ++VNTI  +TF++A++ RLE +D+R+PRG
Sbjct: 87  AEIFVLSLFGIGLTLNMYFASLTYTSPTFLASMVNTIASLTFVMAIILRLEHLDIRNPRG 146

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSS 180
           +AKILGTL SLVGVM++   KGP + +L    IH+G N++HENW KGSILTVASCI WS 
Sbjct: 147 LAKILGTLFSLVGVMIMTSCKGPVIRNLSSPLIHIGRNNMHENWTKGSILTVASCITWSI 206

Query: 181 FYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           +YIMQAFT+K+YPA LSI+ WMN IG AQSAV  +I+Q K  AWS +  I LW  IY+
Sbjct: 207 WYIMQAFTMKRYPAPLSITTWMNFIGGAQSAVIAVIMQHKPEAWSFSVNIQLWSTIYA 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576820|ref|XP_002529296.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223531220|gb|EEF33065.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/240 (58%), Positives = 185/240 (77%), Gaps = 2/240 (0%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M   Q+    +Y +TE SFN+G+NPH+Y+TYRH   S++M P AYF ERK RPK+TLA+F
Sbjct: 21  MFFAQVGYTFLYLITEASFNRGMNPHVYITYRHVVASVVMLPIAYFAERKQRPKMTLALF 80

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           +EIF+LSLLGVSL LN+Y+AS++Y  PTF+ +VVNTI  + F+IA+  RLE +D+R+PRG
Sbjct: 81  VEIFILSLLGVSLTLNMYYASLRYTSPTFVASVVNTIAALAFVIAIALRLESLDLRNPRG 140

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN--SVHENWLKGSILTVASCILW 178
           +AK+LGTL SL GVM +  YKGP + +L   PIH+  N  S HENWLKGSILTVASCI W
Sbjct: 141 LAKLLGTLVSLAGVMTMTLYKGPKMKNLSVTPIHIEGNTASNHENWLKGSILTVASCITW 200

Query: 179 SSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           S +YIMQA TLK+YPA+LS++AWM+ +GAAQSA +T+IV+ + AAW+    +D W I+Y 
Sbjct: 201 SVWYIMQAVTLKRYPAQLSLTAWMSIVGAAQSAFFTVIVEHRKAAWTIGFNVDFWSILYG 260

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433049|ref|XP_002280977.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera] gi|296083618|emb|CBI23607.3| unnamed protein product [Vitis vinifera]

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 148/239 (61%), Positives = 189/239 (79%), Gaps = 1/239 (0%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M L Q     +YF+TE SFN G+NPH+Y+TYRH  G L+ FPFAYFLERK+RPKLTLA+F
Sbjct: 21  MALAQFGYTFLYFITEASFNHGMNPHVYITYRHIVGGLVTFPFAYFLERKVRPKLTLALF 80

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           +E+F+LSLLGV L+LN+YFAS++Y  PTF+ +VVNTI  +TFIIAVV R+E++D R+PRG
Sbjct: 81  VELFILSLLGVGLSLNMYFASLRYTSPTFIASVVNTIASLTFIIAVVLRMEVLDFRNPRG 140

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHL-GTNSVHENWLKGSILTVASCILWS 179
           IAK+LGTL SL GVM +  YKGP + SL    IH+ G  ++HENWLKGSILTVASC+ WS
Sbjct: 141 IAKVLGTLVSLAGVMTMTLYKGPIMKSLWDPLIHIQGNTTIHENWLKGSILTVASCVTWS 200

Query: 180 SFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
            +YIMQA TLK+YPA+LS++ WM+ IGAAQSAV+T+ V+   AAW+    IDLW  +Y+
Sbjct: 201 IWYIMQAITLKRYPAQLSLTTWMSFIGAAQSAVFTVCVEHSRAAWTIGFNIDLWSTVYA 259

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357114030|ref|XP_003558804.1| PREDICTED: auxin-induced protein 5NG4-like [Brachypodium distachyon]

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 136/239 (56%), Positives = 188/239 (78%), Gaps = 1/239 (0%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           MIL+Q+    +YF+TED+FN+GLNP++YVTYRH   +L++ PFAYF E+K+RPK+TL +F
Sbjct: 15  MILVQLSYTLMYFVTEDAFNRGLNPYVYVTYRHLLVALLLCPFAYFHEKKLRPKMTLMLF 74

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           LEIF+LSLLGVSL LN+YFAS+KY  PTF+TA+ NT+  +TF IA+V R+EIVDV+SPRG
Sbjct: 75  LEIFVLSLLGVSLTLNMYFASLKYTSPTFVTAMANTVASITFAIAIVLRMEIVDVKSPRG 134

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHL-GTNSVHENWLKGSILTVASCILWS 179
           +AK+ GT  S  GV  + FYKG A+ S   APIH+ G+N+VH +W+KGS+L VASC+ WS
Sbjct: 135 LAKVAGTAVSFAGVTTMTFYKGAAIASPWKAPIHIHGSNAVHGSWVKGSLLAVASCVCWS 194

Query: 180 SFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
            +YIMQA ++++YPA+LS++AWM  +G  QSA +T+++Q +   W    G++ WCIIYS
Sbjct: 195 IWYIMQAGSVERYPAELSLTAWMATVGGIQSAAFTVLLQHRKEDWLVGFGLNFWCIIYS 253

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535430|ref|XP_003536248.1| PREDICTED: auxin-induced protein 5NG4 [Glycine max]

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 134/240 (55%), Positives = 190/240 (79%), Gaps = 2/240 (0%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M+L+Q+    +YF+TE SFN G++P++YVTYRH   +++MFPFAYFLER  RPKLT A+F
Sbjct: 21  MVLVQVGYTFLYFITEASFNHGMSPYVYVTYRHIVAAVVMFPFAYFLERNARPKLTFALF 80

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           +EIF+LSLLGVS+ LN+YFAS+KY +PTF+ +++NTI  +TFIIAV  R E++D+R+PRG
Sbjct: 81  MEIFVLSLLGVSVTLNMYFASLKYTNPTFVASMINTIASLTFIIAVALRFEVLDLRNPRG 140

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNS--VHENWLKGSILTVASCILW 178
           IAK++GT+ SL GV+++  YKGP + +L    IH+   S  ++E+WLKGSILTV+SC+ W
Sbjct: 141 IAKVIGTIISLAGVLIMTLYKGPVMRNLWHPLIHIPGKSAAINEDWLKGSILTVSSCVTW 200

Query: 179 SSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           S +YIMQA TLK+YPA+LS++ WM+ +GAAQSA +T+IV+  ++AW+    +DLW  IY 
Sbjct: 201 SLWYIMQASTLKRYPAQLSLTTWMSFVGAAQSAAFTVIVEHNSSAWTIGLNVDLWSTIYG 260

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242036909|ref|XP_002465849.1| hypothetical protein SORBIDRAFT_01g046960 [Sorghum bicolor] gi|241919703|gb|EER92847.1| hypothetical protein SORBIDRAFT_01g046960 [Sorghum bicolor]

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 132/242 (54%), Positives = 185/242 (76%), Gaps = 4/242 (1%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           M+L Q+C   +YF+TE  FNQGLNP++Y+TYRH   +++++PFAY+ E+ +RPK+TL +F
Sbjct: 20  MVLAQLCYTLMYFITEAGFNQGLNPYVYITYRHLLVAVLIWPFAYYQEKGLRPKMTLMLF 79

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           +EIF+LSLLGVSL LN+YFAS+KY  PTF+T+VVNTI  MTF+IA++ R+EIVDV+S RG
Sbjct: 80  MEIFVLSLLGVSLTLNMYFASLKYTSPTFVTSVVNTIASMTFVIAIILRMEIVDVKSLRG 139

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHL---GTNSV-HENWLKGSILTVASCI 176
           +AKI GT+ S  GV  +  YKG A+ SL  +P+H+   G+  V H++W+KGS+L VASCI
Sbjct: 140 LAKIAGTVVSFAGVTTMTLYKGAAITSLWKSPVHIPGSGSGGVGHDSWVKGSVLAVASCI 199

Query: 177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCII 236
            WS +YIMQA +LK+YPA+LS++AWM  +G  QS ++T ++Q K   W    G+  WCI+
Sbjct: 200 CWSIWYIMQASSLKRYPAQLSLTAWMCTVGGIQSTIFTALMQHKPEDWRIGFGLKFWCIV 259

Query: 237 YS 238
           YS
Sbjct: 260 YS 261

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545847|ref|XP_003541345.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 127/228 (55%), Positives = 178/228 (78%)

Query: 11  VYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLG 70
           +YFL E S N+G+NPH++VTYRHA G +++ PFAY  ERK  PKLTL +F+E+F LSL G
Sbjct: 31  LYFLVEASLNKGMNPHVFVTYRHAVGGIVVLPFAYIRERKTWPKLTLTMFVELFFLSLFG 90

Query: 71  VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLAS 130
           +SL LN++F S+KY  P+F+ +++NTI  +TFIIAV  RLE+VDV+ PRG+A++ GT+ S
Sbjct: 91  ISLTLNMFFESLKYTTPSFVASMINTISPLTFIIAVGLRLEVVDVKKPRGMARVFGTVLS 150

Query: 131 LVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLK 190
           L+G +++  YKG  + SL+GAP ++    VH NW+KGSIL+VASCI WS +YI+QA  +K
Sbjct: 151 LIGALIMTLYKGHTIQSLRGAPFNVRGKLVHNNWIKGSILSVASCISWSLWYILQAIIVK 210

Query: 191 KYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           KYPA+LS++AW+NC+GAAQSA +T++VQ K  AW  TS ++L CI Y+
Sbjct: 211 KYPAQLSLTAWINCMGAAQSAAFTVLVQRKPTAWFITSTVELCCIFYA 258

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536823|ref|XP_003536933.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 126/228 (55%), Positives = 179/228 (78%)

Query: 11  VYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLG 70
           +YFL E S N+ +NPH++VTYRHA G +++ PFAY  ERK  PKLTL +F+E+F LSL G
Sbjct: 31  LYFLVEASLNKAMNPHVFVTYRHAVGGIVVLPFAYIRERKTWPKLTLTMFVELFFLSLFG 90

Query: 71  VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLAS 130
           + L LN++FAS+KY  P+F+  ++NT   +TFIIAV  RLE+VDV++ RG+AK+ GT+ S
Sbjct: 91  IRLTLNMFFASLKYTSPSFVACMINTTSSLTFIIAVGLRLEVVDVKNTRGLAKVFGTVLS 150

Query: 131 LVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLK 190
           L+G +++  Y+G  + SL+GAP+H+  N VH+NW+KGSIL+VASCI WS +YI+QA  +K
Sbjct: 151 LIGALIMTLYEGHTIHSLQGAPLHVRGNLVHKNWIKGSILSVASCISWSLWYILQAIIVK 210

Query: 191 KYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           KYPA+LS++AW+NC+GAAQSA +T++VQ K  AW  TS ++L+CI Y+
Sbjct: 211 KYPAQLSLTAWINCMGAAQSAAFTVLVQHKPTAWFITSTVELFCIFYA 258

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326522246|dbj|BAK07585.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 126/240 (52%), Positives = 183/240 (76%), Gaps = 2/240 (0%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVF 60
           MI++Q+C   +YF+TE +FN+GLNP++YVTYRH   +++++PFAY+ E+K+RPK+T  +F
Sbjct: 21  MIMVQLCYTLMYFVTEAAFNRGLNPYVYVTYRHLLVAVLLWPFAYYHEKKLRPKMTWMLF 80

Query: 61  LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
           LEIF+LSLLGVSL LN+YFAS+KY  PTF+T++VNT+  +TF+IA+  R+EIVD+RS RG
Sbjct: 81  LEIFVLSLLGVSLTLNMYFASLKYTSPTFVTSMVNTVASITFVIAIALRIEIVDLRSARG 140

Query: 121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHL--GTNSVHENWLKGSILTVASCILW 178
           +AK+ GT  S  GV  +  YKG A+ S   AP+H+  G ++ H+ WLKGS+L VASC+ W
Sbjct: 141 LAKVAGTAVSFAGVTTMTLYKGAAIASPWKAPVHIPGGGDAAHDGWLKGSLLAVASCVCW 200

Query: 179 SSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
           S +YIMQA ++K+YPA+LS++AWM  +G  QS  +T+++Q +   W    G+  WCI+YS
Sbjct: 201 SVWYIMQATSVKRYPAELSLTAWMATVGGVQSVAFTVLLQHEKQDWLIGFGLKFWCIVYS 260

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.991	0.638	0.359	2.6e-40
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.991	0.619	0.331	6.3e-37
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.987	0.633	0.334	1.3e-36
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.983	0.621	0.333	2.7e-36
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.991	0.643	0.330	3.5e-36
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.991	0.611	0.310	8.3e-35
TAIR|locus:2049837	336	UMAMIT13 "Usually multiple aci	0.645	0.461	0.382	1.7e-34
TAIR|locus:2102629	377	UMAMIT10 "Usually multiple aci	0.991	0.631	0.310	2e-33
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.987	0.589	0.330	4.1e-33
TAIR|locus:2031144	343	UMAMIT22 "Usually multiple aci	0.983	0.688	0.322	2.3e-32

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 88/245 (35%), Positives = 137/245 (55%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             +I LQ   A +Y +T  SF  G+N  I  TYRH   ++++ PFA  LERKIRPK+T    
Sbjct:    15 IISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKMTWPLF 74

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+  MK    T+ +A VN +P +TFI+AV+FR+E V+++  R 
Sbjct:    75 LRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETVNLKKTRS 134

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGA--PIH---LGTNS--VHENWLKGSILTVA 173
             +AK++GT  ++ G MV+  YKGPA+   K A   +H    GT+S    +NW+ G++  + 
Sbjct:   135 LAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVTGTLAVMG 194

Query:   174 SCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLW 233
             S   W+ F+I+Q+FTLKKYPA+LS+  W+  +G   + + ++I+    +AW         
Sbjct:   195 SITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVRDVSAWKVGMDSGTL 254

Query:   234 CIIYS 238
               +YS
Sbjct:   255 AAVYS 259

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 81/244 (33%), Positives = 127/244 (52%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             MI LQ   A  Y +   + NQG N ++ + YR+   +L++ PFA   ERK+RPK+T    
Sbjct:    17 MIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVRPKMTLSVL 76

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                               +  M     T+ +A++N +P +TFIIA + R+E V++   R 
Sbjct:    77 WKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEKVNIAEVRS 136

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPI------HLGTNSVHENWLKGSILTVAS 174
              AKI+GTL  L G +V+  YKGP +P     P       H   +  H NW+ G++L +  
Sbjct:   137 KAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNMDQQNGHTNNSQDHNNWVVGTLLILLG 196

Query:   175 CILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWC 234
             C+ WS FY++Q+ T+K YPA LS+SA +   GA QS    ++V+   + W+      L+ 
Sbjct:   197 CVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSGWAVGWDARLFA 256

Query:   235 IIYS 238
              +Y+
Sbjct:   257 PLYT 260

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 81/242 (33%), Positives = 132/242 (54%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             ++ LQ   A +  + + + NQG++PH+  +YRH   ++ + PFAYFL+RKIRPK+T    
Sbjct:    12 VVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKMTLSIF 71

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+  MKY   TF  A+ N +P   FI+A +FRLE V+V+    
Sbjct:    72 FKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNVKKIHS 131

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAP--IHLGTNS--VHENWLKGSILTVASCI 176
              AKILGT+ ++ G M++   KGP +P     P  IH  +++  V ++  KG+ L    CI
Sbjct:   132 QAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGVKQDLTKGASLIAIGCI 191

Query:   177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP-KAAAWSTTSGIDLWCI 235
              W+ F  +QA TLK YP +LS++A++  +G+ +S +  + ++    +AW+      L   
Sbjct:   192 CWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHLDSKLLAA 251

Query:   236 IY 237
             +Y
Sbjct:   252 VY 253

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 81/243 (33%), Positives = 138/243 (56%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             M++LQ+ +A +  L++   N+G++ ++ V YRHA  +++M PFA++ ++K+RPK+T    
Sbjct:    19 MVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPKMTLMIF 78

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+  MKY   TF TA+ N +P +TF++A +F LE V +R  R 
Sbjct:    79 FKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVKLRCIRS 138

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSL--KGAPIH--LGTNSVHENWLKGSILTVASCI 176
               K++GTLA++ G M++   KGP +     KG   H   GT+ +H   +KG++L    C 
Sbjct:   139 TGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTD-IHSA-IKGAVLVTIGCF 196

Query:   177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQ-SAVYTIIVQPKAAAWSTTSGIDLWCI 235
              ++ F I+QA TL+ YPA+LS++AW+  +G  + +AV  ++ +   +AW+      L   
Sbjct:   197 SYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIGWDTKLLTA 256

Query:   236 IYS 238
              YS
Sbjct:   257 TYS 259

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 80/242 (33%), Positives = 134/242 (55%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             +I LQ   A +Y +T  SF  G++  +  TYRH   +++M PFA   ERKIRPK+T    
Sbjct:    15 IISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKMTLAIF 74

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+  +K    ++ +A  N +P +TFI+A++FRLE V+ R    
Sbjct:    75 WRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNFRKVHS 134

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGA--PIHLGTNSVH--ENWLKGSILTVASCI 176
             +AK++GT+ ++ G M++  YKGPA+  +K A    H G++S    ++W+ G+I  + S  
Sbjct:   135 VAKVVGTVITVGGAMIMTLYKGPAIEIVKAAHNSFHGGSSSTPTGQHWVLGTIAIMGSIS 194

Query:   177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCII 236
              W++F+I+Q++TLK YPA+LS+   +  IG   +A+ ++I+    +AW           +
Sbjct:   195 TWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVRDPSAWKIGMDSGTLAAV 254

Query:   237 YS 238
             YS
Sbjct:   255 YS 256

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 78/251 (31%), Positives = 134/251 (53%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             MI +Q   A +Y +T  S   G+N ++   YRHA  + ++ PFA F ERKIRPK+T    
Sbjct:    15 MISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKMTFRIF 74

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+  M Y   TF +A  N +P +TF++A++FRLE V+ +  R 
Sbjct:    75 LQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNFKKVRS 134

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLK----------GAP-IH--LGTNSVHENWLKG 167
             IAK++GT+ ++ G +++  YKGP V  ++          GA   H   G  ++ ++W+ G
Sbjct:   135 IAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDKHWIPG 194

Query:   168 SILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTT 227
             +++ +     W+ F+I+Q+FTLK+YPA+LS++  +  +G  +    +++     +AW   
Sbjct:   195 TLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVRDLSAWKIG 254

Query:   228 SGIDLWCIIYS 238
                +L+   YS
Sbjct:   255 FDSNLFAAAYS 265

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2049837 UMAMIT13 "Usually multiple acids move in and out Transporters 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 62/162 (38%), Positives = 98/162 (60%)

Query:    82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYK 141
             MKY   TF  A+ NT+P +TFI+A++FRLE V  +S R  AK++GT+ ++ G+MV+   K
Sbjct:    73 MKYTTATFAIALYNTLPAVTFILALIFRLESVKFQSIRSAAKVVGTVTTVGGIMVMTLVK 132

Query:   142 GPAVPSL--KG--APIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLS 197
             GPA+     KG  A   +GT+ +H + +KG++L    C  ++ F I+QA TLK YPA+LS
Sbjct:   133 GPALDLFWTKGPSAQNTVGTD-IHSS-IKGAVLVTIGCFSYACFMILQAITLKTYPAELS 190

Query:   198 ISAWMNCIGAAQSAVYTIIVQP-KAAAWSTTSGIDLWCIIYS 238
             ++ W+  IG  +  V  ++++    + W+      L  I YS
Sbjct:   191 LATWICLIGTIEGVVVALVMEKGNPSVWAIGWDTKLLTITYS 232

GO:0016020 "membrane" evidence=IEA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2102629 UMAMIT10 "Usually multiple acids move in and out Transporters 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 74/238 (31%), Positives = 131/238 (55%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             M+ LQ   A +  +T+   ++G++ ++ V YR+A  +  + PFA   ERK+RPK+T    
Sbjct:    15 MVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRPKMTFPIF 74

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+A +K   PTF  AV N +P +TFII+++ R+E V++R  R 
Sbjct:    75 MQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPALTFIISIICRMEKVEMRKVRF 134

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSS 180
              AK++GTL  +VG M++  +K P +  L+        +   E++LK ++  + +   W+S
Sbjct:   135 QAKVVGTLVIVVGAMLMILFKIPLITFLRSHLTGHALSPAGEDYLKATVFLLIASFSWAS 194

Query:   181 FYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIYS 238
             F+++QA TLK+Y + LS+S  +  +G  QS   T +++P  +AW+    ++L    Y+
Sbjct:   195 FFVLQAATLKRYSSHLSLSTMVCFMGTLQSTALTFVMEPNLSAWNIGFDMNLLASAYA 252

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 83/251 (33%), Positives = 134/251 (53%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             MI LQ   A +  +T+ S N G++ ++ V YRHA  + ++ PFA+F ERK +PK+T    
Sbjct:    22 MISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPKITFSIF 81

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+  +KY  PTF  A+ N +P MTFI+AV+FR+E++D++    
Sbjct:    82 MQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLDLKKLWC 141

Query:   121 IAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHEN------------WLKGS 168
              AKI GT+ ++ G M++  YKGP V       +H+  +S H N            +LKGS
Sbjct:   142 QAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSS-HANTTSSKNSSSDKEFLKGS 200

Query:   169 ILTVASCILWSSFYIMQAFTLKKYPA-KLSISAWMNCIGAAQSAVYTIIVQPKAAAWSTT 227
             IL + + + W+S +++QA  LK Y   +LS++  +  IG  Q+   T +++   +AW   
Sbjct:   201 ILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNPSAWRIG 260

Query:   228 SGIDLWCIIYS 238
               ++L    YS
Sbjct:   261 WDMNLLAAAYS 271

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2031144 UMAMIT22 "Usually multiple acids move in and out Transporters 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 77/239 (32%), Positives = 127/239 (53%)

Query:     1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTXXXX 60
             M+ +QI  A +  L++ + +QG NP ++V YR A  +L + PFA+FLE      L+    
Sbjct:    11 MVFVQIVYAGMPLLSKVAISQGTNPFVFVFYRQAFAALALSPFAFFLESSKSSPLSFILL 70

Query:    61 XXXXXXXXXXXXXXXXXYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRG 120
                              Y+ +++    TF  A  N IP +TF++A++FRLE V ++   G
Sbjct:    71 LKIFFISLCGLTLSLNLYYVAIENTTATFAAATTNAIPSITFVLALLFRLETVTLKKSHG 130

Query:   121 IAKILGTLASLVGVMVIAFYKGPA-VPSLKGAPIHLGTNSVHENWLKGSILTVASCILWS 179
             +AK+ G++  ++G +V AF KGP+ +     + I  GT    +N +KGSI  +A+   W 
Sbjct:   131 VAKVTGSMVGMLGALVFAFVKGPSLINHYNSSTIPNGTVPSTKNSVKGSITMLAANTCWC 190

Query:   180 SFYIMQAFTLKKYPAKLSISAWMNCI-GAAQSAVYTIIVQPKAAAWSTTSGIDLWCIIY 237
              + IMQ+  +K+YPAKL + A + C+    QSAV+ + V    + W    G+ L  + Y
Sbjct:   191 LWIIMQSKVMKEYPAKLRLVA-LQCLFSCIQSAVWAVAVNRNPSVWKIEFGLPLLSMAY 248

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	240
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	5e-25
pfam00892	126	pfam00892, EamA, EamA-like transporter family	1e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  100 bits (251), Expect = 5e-25
 Identities = 69/245 (28%), Positives = 128/245 (52%), Gaps = 11/245 (4%)

Query: 1   MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLER-KIRPKLTLAV 59
           M+  +  V  +  L + + ++GLN + ++ Y +   SL++ P  +F  R +  P L++++
Sbjct: 18  MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI 77

Query: 60  FLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPR 119
             +I LL  LG    +  Y   ++Y +PT  +A+ N  P +TFI+A++FR+E V  +   
Sbjct: 78  LSKIGLLGFLGSMYVITGYIG-IEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS 136

Query: 120 GIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLG-------TNSVHENWLKGSILTV 172
            +AK++GT+ SL+G +V+ FY GP V  +  +P +L         +S + +WL G  L  
Sbjct: 137 SVAKVMGTILSLIGALVVIFYHGPRV-FVASSPPYLNFRQLSPPLSSSNSDWLIGGALLT 195

Query: 173 ASCILWSSFYIMQAFTLKKYPAKLSIS-AWMNCIGAAQSAVYTIIVQPKAAAWSTTSGID 231
              I  S  +I+QA  + +YPA  ++S  +  C+    S +  ++ +   + W     I 
Sbjct: 196 IQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT 255

Query: 232 LWCII 236
           L  I+
Sbjct: 256 LITIV 260

Length = 358

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 37  SLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNT 96
           + ++     FL RK    L+L   L +  L L G +L   LYF ++KYV  +  + + + 
Sbjct: 30  AGILLILLLFLLRKPFALLSLKAILALLYLGLFGTALGYLLYFYALKYVSASNASVITSL 89

Query: 97  IPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF 139
            P  T I++V+   E + ++      ++LG +  L+GV++I  
Sbjct: 90  SPVFTLILSVLLLGEKLTLK------QLLGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
PLN00411	358	nodulin MtN21 family protein; Provisional	99.95
PRK11272	292	putative DMT superfamily transporter inner membran	99.9
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.88
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.87
PRK11689	295	aromatic amino acid exporter; Provisional	99.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.84
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.83
PRK15430	296	putative chloramphenical resistance permease RarD;	99.82
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.79
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.74
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.72
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.68
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.64
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.59
COG2510	140	Predicted membrane protein [Function unknown]	99.59
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.4
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.31
COG2962	293	RarD Predicted permeases [General function predict	99.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.28
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.27
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.19
KOG2765	416	consensus Predicted membrane protein [Function unk	99.17
PRK11272	292	putative DMT superfamily transporter inner membran	99.1
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.09
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.99
PRK11689	295	aromatic amino acid exporter; Provisional	98.95
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.91
PLN00411	358	nodulin MtN21 family protein; Provisional	98.87
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.83
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.73
PRK15430	296	putative chloramphenical resistance permease RarD;	98.55
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.48
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.47
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.46
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.46
KOG2766	336	consensus Predicted membrane protein [Function unk	98.41
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.4
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.38
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.3
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.08
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.06
KOG1443	349	consensus Predicted integral membrane protein [Fun	97.83
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.81
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.75
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	97.64
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.53
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.5
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.35
PRK13499	345	rhamnose-proton symporter; Provisional	97.16
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.11
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.07
KOG1580	337	consensus UDP-galactose transporter related protei	96.9
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.83
COG2962	293	RarD Predicted permeases [General function predict	96.73
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.55
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.5
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.49
COG2076	106	EmrE Membrane transporters of cations and cationic	96.11
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.1
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.08
KOG1581	327	consensus UDP-galactose transporter related protei	95.89
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.83
PRK11431	105	multidrug efflux system protein; Provisional	95.74
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.7
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.64
KOG2765	416	consensus Predicted membrane protein [Function unk	94.92
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.73
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.24
KOG1580	337	consensus UDP-galactose transporter related protei	93.2
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	92.61
PRK13499	345	rhamnose-proton symporter; Provisional	92.33
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	91.88
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	91.42
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	91.31
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	91.12
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	89.41
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	88.32
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	86.6
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	86.56
KOG4831	125	consensus Unnamed protein [Function unknown]	85.87
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	85.6
COG2510	140	Predicted membrane protein [Function unknown]	82.83
KOG1581	327	consensus UDP-galactose transporter related protei	81.26

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.95  E-value=2.5e-27  Score=208.77  Aligned_cols=212  Identities=28%  Similarity=0.500  Sum_probs=168.4

Q ss_pred             ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLER-KIRPKLTLAVFLEIFLLSLLGVSLALNLYF   79 (240)
Q Consensus         1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (240)
                      |+++++.+++..++.|.+++.|++|..+.++|+.+|++++++++..++| +++++.+++++..+.+.|+++ ..++.+++
T Consensus        18 ~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~~~~~~~~   96 (358)
T PLN00411         18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-SMYVITGY   96 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-HHHHHHHH
Confidence            6789999999999999999999999999999999999999998876544 333455688889999999998 57888999


Q ss_pred             HhhcccCcceeeeeccchhHHHHHHHHHHh------hccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCC----
Q 026352           80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFR------LEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLK----  149 (240)
Q Consensus        80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~------~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~----  149 (240)
                      +|++|+++++++++.+++|+++++++++++      +||+++++      ++|++++++|+.++..++++.....+    
T Consensus        97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~------~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAK------VMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHH------HHHHHHHHHHHHHHHHccCccccccccccc
Confidence            999999999999999999999999999995      66666665      79999999999887765443210000    


Q ss_pred             -CCCccc-CCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          150 -GAPIHL-GTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       150 -~~~~~~-~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                       ++.... .....+.+...|+++.++|+++||.|++++|+..+++|++...+.|++.++++...+.+...++
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~  242 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEK  242 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHcc
Confidence             000000 0001122346699999999999999999999998888656678889999998888777776654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.90  E-value=6.3e-22  Score=170.57  Aligned_cols=187  Identities=16%  Similarity=0.159  Sum_probs=153.3

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +++.++||++++++|.+.++ +||..++++|+.+++++++++...+ | ++ ..++++++.....|.++...++.+++.+
T Consensus        14 ~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~-~-~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~   89 (292)
T PRK11272         14 FALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLR-G-HP-LPTLRQWLNAALIGLLLLAVGNGMVTVA   89 (292)
T ss_pred             HHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHh-C-CC-CCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999998875 9999999999999999998876542 2 22 2356788888888888766788899999


Q ss_pred             h-cccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352           82 M-KYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV  160 (240)
Q Consensus        82 l-~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (240)
                      . +++++++++++.++.|+++++++++ +|||+++++      ++|++++++|+.++... + .               .
T Consensus        90 ~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~-~-~---------------~  145 (292)
T PRK11272         90 EHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSG-G-N---------------L  145 (292)
T ss_pred             HHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcC-c-c---------------c
Confidence            9 9999999999999999999999986 699999999      59999999999776421 1 0               1


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      + +...|++++++++++||.|.+..||..++.  +...+.+++.++++.+.+.....++
T Consensus       146 ~-~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  201 (292)
T PRK11272        146 S-GNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGE  201 (292)
T ss_pred             c-cchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCC
Confidence            1 124699999999999999999999976543  4567789999999888887765543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.88  E-value=3.3e-21  Score=162.85  Aligned_cols=181  Identities=17%  Similarity=0.208  Sum_probs=149.8

Q ss_pred             HHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 026352            8 VASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHP   87 (240)
Q Consensus         8 wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~   87 (240)
                      ||.+++..|..+++..||....+.|+..+.+++.+....  |     .++++++.....|.++..+++.++++|++|+++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            899999999998877999999999999999888776432  2     234566777788888878899999999999999


Q ss_pred             ceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHH
Q 026352           88 TFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKG  167 (240)
Q Consensus        88 ~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  167 (240)
                      ++++++.++.|+++++++++++|||+++++      +.|++++++|+.++... ++                . .+...|
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~~-~~----------------~-~~~~~G  129 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLSD-GN----------------L-SINPAG  129 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhccC-Cc----------------c-cccHHH
Confidence            999999999999999999999999999999      59999999999886521 11                1 123579


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          168 SILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       168 ~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      +.++++++++|+.+.+..||..++.+ ++...+.+++.++.+.+.+.....++
T Consensus       130 ~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  182 (260)
T TIGR00950       130 LLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGP  182 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999877663 13455667889999888888766543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.87  E-value=1e-21  Score=169.79  Aligned_cols=185  Identities=15%  Similarity=0.222  Sum_probs=138.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +++.++||++++++|.+.++ +||..+.++|+.++++.++++.  + ++   +.+++   .....|+.....++.+++.+
T Consensus        10 l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~-~~---~~~~~---~~~~~g~~~~~~~~~~~~~~   79 (299)
T PRK11453         10 LLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--A-RP---KVPLN---LLLGYGLTISFGQFAFLFCA   79 (299)
T ss_pred             HHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--c-CC---CCchH---HHHHHHHHHHHHHHHHHHHH
Confidence            56889999999999999876 9999999999999887766543  1 21   11222   33444555545566788899


Q ss_pred             hcc-cCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352           82 MKY-VHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV  160 (240)
Q Consensus        82 l~~-~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (240)
                      ++| .++++++++.+++|+++.+++++++|||+++++      ++|++++++|+.++... + . +             .
T Consensus        80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~-~-~-~-------------~  137 (299)
T PRK11453         80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIED-S-L-N-------------G  137 (299)
T ss_pred             HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhccc-c-C-C-------------C
Confidence            998 488999999999999999999999999999999      59999999999876521 1 1 0             0


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCc--hhHHHHHHHHHHHHHHHHHHHhcc
Q 026352          161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPA--KLSISAWMNCIGAAQSAVYTIIVQ  218 (240)
Q Consensus       161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~  218 (240)
                      ......|++++++++++|+.|++++||..++.++  ....+.+++..+.+.....+...|
T Consensus       138 ~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (299)
T PRK11453        138 QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILD  197 (299)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhc
Confidence            1112469999999999999999999997655432  234556777776665555544444

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.85  E-value=2.8e-20  Score=160.58  Aligned_cols=174  Identities=13%  Similarity=0.039  Sum_probs=128.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +++.++||++++..|.+.++ +||..+.++|+.+|+++++++.   .+++.++   ++++ ....+.++...++.+++.+
T Consensus        10 l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~---~~~~-~~~~~~l~~~~~~~~~~~a   81 (295)
T PRK11689         10 LIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ---FPKR-YLLAGGLLFVSYEICLALS   81 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc---ccccccc---ccHH-HHHHHhHHHHHHHHHHHHH
Confidence            57889999999999999887 9999999999999999988753   1211111   1222 2334444555788888888


Q ss_pred             hcc----cCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCC
Q 026352           82 MKY----VHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGT  157 (240)
Q Consensus        82 l~~----~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~  157 (240)
                      +++    +++++++++.+++|+++.+++++++|||+++++      ++|++++++|+.++... ++..+..+       .
T Consensus        82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~-~~~~~~~~-------~  147 (295)
T PRK11689         82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGG-DNGLSLAE-------L  147 (295)
T ss_pred             HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecC-Cccchhhh-------h
Confidence            764    577888899999999999999999999999999      59999999999877532 11100000       0


Q ss_pred             CccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHH
Q 026352          158 NSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSI  198 (240)
Q Consensus       158 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~  198 (240)
                      .....+...|+++.++|++|||.|+++.||..++. ++...
T Consensus       148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~  187 (295)
T PRK11689        148 INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITL  187 (295)
T ss_pred             hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhH
Confidence            00001224699999999999999999999988776 45543

>TIGR00688 rarD rarD protein

Probab=99.84  E-value=1.1e-19  Score=153.74  Aligned_cols=159  Identities=11%  Similarity=0.119  Sum_probs=125.8

Q ss_pred             ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCCHHH-HHHHHHHHHHHHHHH
Q 026352            1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI-----RPKLTLAV-FLEIFLLSLLGVSLA   74 (240)
Q Consensus         1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~-~~~~~~~g~~~~~~~   74 (240)
                      ++++.++||.+++++|. .++ +||.++.++|+.++.++++++...++|++     .++.++++ +..+...|++. ..+
T Consensus         7 ~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~   83 (256)
T TIGR00688         7 SLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI-GFN   83 (256)
T ss_pred             HHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH-HHH
Confidence            36788999999999998 455 99999999999999988877664433211     11122233 44456667664 479


Q ss_pred             HHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 026352           75 LNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIH  154 (240)
Q Consensus        75 ~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~  154 (240)
                      +.+++++++++++++++++.+++|+++++++++++|||+++++      ++|++++++|+.++...++            
T Consensus        84 ~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------------  145 (256)
T TIGR00688        84 WWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------------  145 (256)
T ss_pred             HHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC------------
Confidence            9999999999999999999999999999999999999999999      5999999999987653211            


Q ss_pred             cCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026352          155 LGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKK  191 (240)
Q Consensus       155 ~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~  191 (240)
                            +..     .++++++++|+.|.+..||..++
T Consensus       146 ------~~~-----~~~l~aa~~~a~~~i~~~~~~~~  171 (256)
T TIGR00688       146 ------SLP-----WEALVLAFSFTAYGLIRKALKNT  171 (256)
T ss_pred             ------Cch-----HHHHHHHHHHHHHHHHHhhcCCC
Confidence                  111     35688999999999999997653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.83  E-value=3.8e-19  Score=153.90  Aligned_cols=179  Identities=15%  Similarity=0.121  Sum_probs=148.7

Q ss_pred             HHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeee
Q 026352           13 FLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTA   92 (240)
Q Consensus        13 i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~i   92 (240)
                      +..|.++++--+|..+++.|+.++.+...+... ..++++++.++++++.++..|+++ ..++.+.+++++|++++++++
T Consensus        19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~l   96 (302)
T TIGR00817        19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHT   96 (302)
T ss_pred             HHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHH
Confidence            478988876467999999999999877655421 122333457789999999999997 578899999999999999999


Q ss_pred             eccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHH
Q 026352           93 VVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTV  172 (240)
Q Consensus        93 i~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l  172 (240)
                      +.++.|+++++++++++|||+++++      +.|++++++|+.+.. . + +               .+.+ ..|+++++
T Consensus        97 i~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~-~-~-~---------------~~~~-~~G~~~~l  151 (302)
T TIGR00817        97 IKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS-D-T-E---------------LSFN-WAGFLSAM  151 (302)
T ss_pred             HHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc-C-C-c---------------cccc-HHHHHHHH
Confidence            9999999999999999999999998      599999999997542 1 1 1               1122 56999999


Q ss_pred             HHHHHHHHHHHHHhhhhh--cCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          173 ASCILWSSFYIMQAFTLK--KYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       173 ~a~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      +|+++|+.|.+..||..+  ++ ++...+.|++..+.+.++|.....|+
T Consensus       152 ~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~  199 (302)
T TIGR00817       152 ISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEG  199 (302)
T ss_pred             HHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcc
Confidence            999999999999999877  67 58899999999999999998876654

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.82  E-value=4.8e-19  Score=152.96  Aligned_cols=176  Identities=11%  Similarity=0.049  Sum_probs=132.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCC--CC-CCHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIR--PK-LTLAVFLEIFLLSLLGVSLALNLY   78 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~~g~~~~~~~~~~~   78 (240)
                      +++.++||.+++.+|.. ++ +||.++.++|+.++.++++++...+++++.  ++ .+++++.. ...+.++...++.++
T Consensus        14 l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   90 (296)
T PRK15430         14 LAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAVLIGGNWLLF   90 (296)
T ss_pred             HHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHHHHHHHHHHH
Confidence            57889999999999975 44 999999999999999888776654321111  00 13344433 335556666899999


Q ss_pred             HHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 026352           79 FASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN  158 (240)
Q Consensus        79 ~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  158 (240)
                      ++|++++++++++++.++.|+++++++++++|||+++++      +.|++++++|+.++...++                
T Consensus        91 ~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~----------------  148 (296)
T PRK15430         91 IWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG----------------  148 (296)
T ss_pred             HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC----------------
Confidence            999999999999999999999999999999999999999      5999999999988652211                


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC-CchhHHHHHHHHHHHHH
Q 026352          159 SVHENWLKGSILTVASCILWSSFYIMQAFTLKKY-PAKLSISAWMNCIGAAQ  209 (240)
Q Consensus       159 ~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~l~  209 (240)
                        + .    ..+.++++++||.|.++.||..++. ++....+.|+..++...
T Consensus       149 --~-~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~  193 (296)
T PRK15430        149 --S-L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIY  193 (296)
T ss_pred             --C-c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Confidence              1 1    1467889999999999999975432 12344455666666544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.79  E-value=6.4e-18  Score=145.73  Aligned_cols=182  Identities=13%  Similarity=0.123  Sum_probs=140.3

Q ss_pred             ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ++++.++|+.++.++|.+.++ +||..+.++|+.+|.++++++...  ++  ++.++|+++..+..|++. ...+.++++
T Consensus        17 ~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~~~~~~~~~   90 (293)
T PRK10532         17 LLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-GGMNYLFYL   90 (293)
T ss_pred             HHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            467899999999999999987 999999999999999988876422  22  134567888888888875 467888999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV  160 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (240)
                      +++|++++.++++.++.|+++.+++.    |+..  +      ..++.++++|+.++... +.+              ..
T Consensus        91 al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~~-~~~--------------~~  143 (293)
T PRK10532         91 SIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLPL-GQD--------------VS  143 (293)
T ss_pred             HHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeeec-CCC--------------cc
Confidence            99999999999999999999988763    4432  2      36778889999776521 211              01


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhcc
Q 026352          161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQ  218 (240)
Q Consensus       161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  218 (240)
                      +. ...|+++.++++++||.|.+..||..++. ++... .++..++++.+.+.....+
T Consensus       144 ~~-~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~  198 (293)
T PRK10532        144 HV-DLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQA  198 (293)
T ss_pred             cC-ChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHcc
Confidence            12 25699999999999999999999998777 46655 4666777777777766543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.74  E-value=1.4e-16  Score=140.69  Aligned_cols=180  Identities=14%  Similarity=0.108  Sum_probs=142.4

Q ss_pred             HHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc
Q 026352           12 YFLTEDSFNQGLN-PHIYVTYRHAAGSLMMFPFAYFLERKIRPKL--TLAVFLEIFLLSLLGVSLALNLYFASMKYVHPT   88 (240)
Q Consensus        12 ~i~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~   88 (240)
                      -...|.++++ +| |+.+.++|+.++.++..+.... +.++.|+.  .+++++.++.+|+++... +...+.|+++++++
T Consensus        65 ~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~~~~-~~~~~~sl~~~svs  141 (350)
T PTZ00343         65 VVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCHLFV-HFGAVISMGLGAVS  141 (350)
T ss_pred             HHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHH
Confidence            4478998887 99 9999999999998876554322 22223333  345788899999998754 55567999999999


Q ss_pred             eeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHH
Q 026352           89 FMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGS  168 (240)
Q Consensus        89 ~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  168 (240)
                      .++++.+++|+++++++++++|||+++++      +.++++.++|+.+...  + +               .+.+ ..|+
T Consensus       142 ~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~--~-~---------------~~~~-~~G~  196 (350)
T PTZ00343        142 FTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV--K-E---------------LHFT-WLAF  196 (350)
T ss_pred             HHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec--c-c---------------chhH-HHHH
Confidence            99999999999999999999999999999      5999999999987652  1 1               1122 5799


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCC------chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          169 ILTVASCILWSSFYIMQAFTLKKYP------AKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       169 ~l~l~a~~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      +++++|+++|+.|++..||..++.+      ++.....++.+.+.+.++|.....|.
T Consensus       197 ~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~  253 (350)
T PTZ00343        197 WCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEG  253 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999866431      24456666688999999998876654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.72  E-value=3.3e-16  Score=134.30  Aligned_cols=163  Identities=11%  Similarity=0.127  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLE-RKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ++++++|+...+..|...++ -++  ..++++..+.+++.|+...+. +++++..+++.+.. ...+.++...++.+++.
T Consensus         7 ~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   82 (281)
T TIGR03340         7 VFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLL-LAISAVANMVYFLGLAQ   82 (281)
T ss_pred             HHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHH-HHHHHHHHHHHHHHHHH
Confidence            57889999999999965554 444  357788888888888765432 22233334444444 44444455689999999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV  160 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (240)
                      +++++++++++.+.++.|+++.+++++++|||+++++      ++|+.+++.|+.++... +.                .
T Consensus        83 a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~-~~----------------~  139 (281)
T TIGR03340        83 AYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLS-RF----------------A  139 (281)
T ss_pred             HHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhcc-cc----------------c
Confidence            9999999999999999999999999999999999999      59999999999876522 11                1


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 026352          161 HENWLKGSILTVASCILWSSFYIMQAFTLKKY  192 (240)
Q Consensus       161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~  192 (240)
                      +.+ ..|+.++++++++|+.|++..|+..++.
T Consensus       140 ~~~-~~g~~~~l~aal~~a~~~i~~k~~~~~~  170 (281)
T TIGR03340       140 QHR-RKAYAWALAAALGTAIYSLSDKAAALGV  170 (281)
T ss_pred             ccc-hhHHHHHHHHHHHHHHhhhhccccccch
Confidence            112 3588899999999999999999875554

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.68  E-value=3.4e-15  Score=129.91  Aligned_cols=197  Identities=19%  Similarity=0.247  Sum_probs=146.9

Q ss_pred             HHHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026352            6 ICVASVYFLTEDSFNQGLN-PHIYVTYRHAAGSLMMFPFAYFLERK-IRPKLTLAVFLEIFLLSLLGVSLALNLYFASMK   83 (240)
Q Consensus         6 ~~wg~~~i~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~   83 (240)
                      ++=..+.+.++...+.+.+ |....+.-+..-.++..++...++++ +..+..+++|++.++++++.. ..+.+...|++
T Consensus        23 l~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv-~aN~~~v~a~~  101 (334)
T PF06027_consen   23 LCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV-EANYLVVLAYQ  101 (334)
T ss_pred             HHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH-HHHHHHHHHhh
Confidence            3344555555555554555 66666666655555555554443322 222223455666777899986 68999999999


Q ss_pred             ccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccc
Q 026352           84 YVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHEN  163 (240)
Q Consensus        84 ~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (240)
                      ||+.+.+.++..+.-+++++++++++|||.++.+      ++|++++++|+.++...+....+          ++..+.+
T Consensus       102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~~~----------~~~~~~~  165 (334)
T PF06027_consen  102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLSGS----------DSSSGSN  165 (334)
T ss_pred             cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccccc----------cCCCCCc
Confidence            9999999999999999999999999999999999      69999999999887654321111          0112344


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352          164 WLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPK  220 (240)
Q Consensus       164 ~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  220 (240)
                      ...||++++.++++||.++++.|+..++. ++..+..+..++|.+++.+....+|.+
T Consensus       166 ~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~  221 (334)
T PF06027_consen  166 PILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERS  221 (334)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehh
Confidence            58899999999999999999999999888 478888999999999999888878764

Some of the sequences in this family are annotated as putative membrane proteins.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.64  E-value=6e-16  Score=115.78  Aligned_cols=125  Identities=23%  Similarity=0.406  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026352            6 ICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYV   85 (240)
Q Consensus         6 ~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~   85 (240)
                      ++||...+..|...++ +||....++|+..+++ +++.....++++.++.+++++......+.++...++.+++.+++++
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            4799999999999887 9999999999999998 6666655554444456778888888888887678999999999999


Q ss_pred             CcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           86 HPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        86 ~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      +++.++.+.+++|+++.+++++++||++++++      ++|+++.+.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999      599999999997753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.59  E-value=9.6e-14  Score=118.16  Aligned_cols=176  Identities=20%  Similarity=0.328  Sum_probs=131.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      ++..+.|+.+....|...++..++....+.|+..+.+...+.... ++...++.. ++++...+.+.++...++.+++.+
T Consensus        13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   90 (292)
T COG0697          13 LLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRPAL-RPWLLLLLLALLGLALPFLLLFLA   90 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hcccccccc-cchHHHHHHHHHHHHHHHHHHHHH
Confidence            456789999999999887654666777777999999884444322 111111111 223455556666667899999999


Q ss_pred             hcccCcceeeeeccchhHHHHHHHH-HHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352           82 MKYVHPTFMTAVVNTIPCMTFIIAV-VFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV  160 (240)
Q Consensus        82 l~~~~~~~a~ii~~~~P~~~~ll~~-~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (240)
                      +++++++.++.+.++.|+++.++++ ++++||+++++      +.|+.+++.|+.++...+.   .              
T Consensus        91 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~---~--------------  147 (292)
T COG0697          91 LKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGG---G--------------  147 (292)
T ss_pred             HhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCC---c--------------
Confidence            9999999999999999999999997 66799999999      5999999999988763211   0              


Q ss_pred             ccc-hhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHH-HHHH
Q 026352          161 HEN-WLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISA-WMNC  204 (240)
Q Consensus       161 ~~~-~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~  204 (240)
                      +.+ ...|+.++++++++|+.+.+..|+.. +. ++..... ++..
T Consensus       148 ~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~  191 (292)
T COG0697         148 GGILSLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL  191 (292)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH
Confidence            011 36899999999999999999999987 55 3555555 4554

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.59  E-value=1.2e-14  Score=107.20  Aligned_cols=128  Identities=14%  Similarity=0.246  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRP-KLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ++++++||...++.|++.++ +||..-++.|-.+....+..++...++.+.+ ..+.|.|..+.+.|+.+ .+...+||.
T Consensus         9 LLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-glswl~Yf~   86 (140)
T COG2510           9 LLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLSWLLYFR   86 (140)
T ss_pred             HHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHHHHHHHH
Confidence            57899999999999999986 9999999999999999988887765443322 24778899999999776 489999999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI  137 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~  137 (240)
                      +++.-+++...-+-.++|++++++++++++||++.++|      +|+++..+|++++
T Consensus        87 ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~------iG~~LI~~Gailv  137 (140)
T COG2510          87 ALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTW------IGIVLIVIGAILV  137 (140)
T ss_pred             HHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHH------HHHHHHHhCeeeE
Confidence            99999999999999999999999999999999999995      9999999998765

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.40  E-value=7.7e-12  Score=107.79  Aligned_cols=180  Identities=15%  Similarity=0.095  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      ++++++||++++..|...  +.++.++.  |..++.+++..+.... |+.+ +..++.+..-++.|.+ ....+.+++.+
T Consensus         7 lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~-~~~~-~~~~~~~~~g~l~G~~-w~ig~~~~~~a   79 (290)
T TIGR00776         7 LIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIF-VLPE-FWALSIFLVGLLSGAF-WALGQINQFKS   79 (290)
T ss_pred             HHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHH-hCCc-ccccHHHHHHHHHHHH-HHhhhhhHHHH
Confidence            567899999999999754  58887775  8888888776655443 2211 1112333333333443 45788999999


Q ss_pred             hcccCcceeeeecc-chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCcc
Q 026352           82 MKYVHPTFMTAVVN-TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSV  160 (240)
Q Consensus        82 l~~~~~~~a~ii~~-~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (240)
                      +++++.+.+..+.+ +.|++..+.+.+++|||.+.+++  ..-++|+++.++|++++...++++.+           +..
T Consensus        80 i~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~--~~~~~g~~l~l~G~~l~~~~~~~~~~-----------~~~  146 (290)
T TIGR00776        80 MRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQT--LLGLLALILIIIGVYLTSRSKDKSAG-----------IKS  146 (290)
T ss_pred             HHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHH--HHHHHHHHHHHHhHheEEeccccccc-----------ccc
Confidence            99999999988887 88889999999999999988761  01138899999998776432211100           000


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHH
Q 026352          161 HENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNC  204 (240)
Q Consensus       161 ~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~  204 (240)
                      ..+..+|.+++++|+++|+.|.+..|+.  ++ +|...++.++.
T Consensus       147 ~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~  187 (290)
T TIGR00776       147 EFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAI  187 (290)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHH
Confidence            0223579999999999999999999986  35 57777554444

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.31  E-value=2e-11  Score=103.06  Aligned_cols=124  Identities=19%  Similarity=0.349  Sum_probs=104.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCCh--HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNP--HIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYF   79 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (240)
                      ++++++|+...+..|...++ .+|  ..+..+|+.++.+++.+.....+++  +..+.+++......+.++....+.+++
T Consensus       134 l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (260)
T TIGR00950       134 LGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGTALAYFLWN  210 (260)
T ss_pred             HHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            57889999999999998765 664  4555578999999988887653322  233567777788888888778999999


Q ss_pred             HhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHH
Q 026352           80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGV  134 (240)
Q Consensus        80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~  134 (240)
                      +++++++++.++.+.+++|+++++++++++||+++.++      +.|..+.+.|+
T Consensus       211 ~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~  259 (260)
T TIGR00950       211 KGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV  259 (260)
T ss_pred             HHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence            99999999999999999999999999999999999999      59998888875

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.28  E-value=3.8e-10  Score=94.86  Aligned_cols=155  Identities=13%  Similarity=0.130  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCC-C--CCCHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIR-P--KLTLAVFLEIFLLSLLGVSLALNLY   78 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~~~   78 (240)
                      +.+.++||..+...|. +++ .|+.++...|.+-+...++......++++. .  .-++|.+..+.+.+.+. ..+...|
T Consensus        13 l~Ay~lwG~lp~y~kl-l~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~~nW~lf   89 (293)
T COG2962          13 LLAYLLWGLLPLYFKL-LEP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-GLNWWLF   89 (293)
T ss_pred             HHHHHHHHHHHHHHHH-Hcc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-HHHHHHh
Confidence            4688999999999996 455 999999999999999888776655433221 1  12345566677777665 4799999


Q ss_pred             HHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 026352           79 FASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN  158 (240)
Q Consensus        79 ~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  158 (240)
                      .|+.++-.+-++|.-.+.+|++..++|++++|||+++-||      +++.++.+|+.......|                
T Consensus        90 iWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~------iAV~lA~~GV~~~~~~~g----------------  147 (293)
T COG2962          90 IWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQW------IAVGLAAAGVLIQTWLLG----------------  147 (293)
T ss_pred             heecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHHHcC----------------
Confidence            9999999999999999999999999999999999999994      999999999987664422                


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 026352          159 SVHENWLKGSILTVASCILWSSFYIMQAFT  188 (240)
Q Consensus       159 ~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~  188 (240)
                        +..+     ..+.=+++|+.|....|+.
T Consensus       148 --~lpw-----val~la~sf~~Ygl~RK~~  170 (293)
T COG2962         148 --SLPW-----VALALALSFGLYGLLRKKL  170 (293)
T ss_pred             --CCcH-----HHHHHHHHHHHHHHHHHhc
Confidence              1222     3345578999999998775

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.28  E-value=6.6e-12  Score=93.21  Aligned_cols=104  Identities=25%  Similarity=0.383  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHH
Q 026352           30 TYRHAAGSLMMFPFAYFLERKI--RPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVV  107 (240)
Q Consensus        30 ~~R~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~  107 (240)
                      .+|+..+.+.+..+...++|.+  .+..+++++......|.++...++.++++++++++ +.++.+.+++|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5799999999988877643321  22334456677777788886689999999999999 58889999999999999999


Q ss_pred             HhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352          108 FRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus       108 ~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      ++|||+++++      +.+++++++|++++...
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence            9999999999      59999999999887643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.27  E-value=3.2e-10  Score=93.25  Aligned_cols=170  Identities=12%  Similarity=0.097  Sum_probs=132.0

Q ss_pred             HHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeee
Q 026352           13 FLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTA   92 (240)
Q Consensus        13 i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~i   92 (240)
                      -+.|-.... ++|.-.+++|..++.++++.+...    .+.+.+++++..+...|.... .-+.+||.+++..+-+.+..
T Consensus        29 s~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP----wr~r~~~~~~~~~~~yGvsLg-~MNl~FY~si~riPlGiAVA  102 (292)
T COG5006          29 SFAKSLFPL-VGAAGVTALRLAIAALILLALFRP----WRRRLSKPQRLALLAYGVSLG-GMNLLFYLSIERIPLGIAVA  102 (292)
T ss_pred             HHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH----HHhccChhhhHHHHHHHHHHH-HHHHHHHHHHHhccchhhhh
Confidence            355655665 999999999999999999887422    223567788888888888765 58889999999999999999


Q ss_pred             eccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHH
Q 026352           93 VVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTV  172 (240)
Q Consensus        93 i~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l  172 (240)
                      +-++-|+.+++++.    +|  .+.      ...+.+++.|+.++.-. +++.              +..| ..|..+++
T Consensus       103 iEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p~-~~~~--------------~~lD-p~Gv~~Al  154 (292)
T COG5006         103 IEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLPL-GQSV--------------WSLD-PVGVALAL  154 (292)
T ss_pred             hhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhheec-cCCc--------------CcCC-HHHHHHHH
Confidence            99999999887644    22  222      58888899999776522 2111              1223 68999999


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhc
Q 026352          173 ASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIV  217 (240)
Q Consensus       173 ~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  217 (240)
                      .++.||++|.+..||..+..+ .-+-+...+.+++++.+|+....
T Consensus       155 ~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~  198 (292)
T COG5006         155 GAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQ  198 (292)
T ss_pred             HHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhh
Confidence            999999999999999886664 45677788999999999988744

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.19  E-value=1.3e-11  Score=102.15  Aligned_cols=192  Identities=17%  Similarity=0.239  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 026352            6 ICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI-RPKLTLAVFLEIFLLSLLGVSLALNLYFASMKY   84 (240)
Q Consensus         6 ~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~   84 (240)
                      .++-+..++.+..++  .||.+..-.|+++--++..|...+..+.. .|+-.   .+++++.|+.|. ...+..|++++|
T Consensus        47 ~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~---R~~LiLRg~mG~-tgvmlmyya~~~  120 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGK---RKWLILRGFMGF-TGVMLMYYALMY  120 (346)
T ss_pred             HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecCCCc---EEEEEeehhhhh-hHHHHHHHHHhh
Confidence            556666777776653  79999999997766666655433322111 12211   234566788886 477888999999


Q ss_pred             cCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccch
Q 026352           85 VHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENW  164 (240)
Q Consensus        85 ~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (240)
                      .+-++|+++.+++|+++.+++|.++||+.++.+      .+|.++.+.|+++++ ++....+.    +....+.+..+..
T Consensus       121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv-RPpFlFG~----~t~g~~~s~~~~~  189 (346)
T KOG4510|consen  121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV-RPPFLFGD----TTEGEDSSQVEYD  189 (346)
T ss_pred             cchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe-cCCcccCC----Ccccccccccccc
Confidence            999999999999999999999999999999988      599999999998765 31111110    0000011111223


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Q 026352          165 LKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTI  215 (240)
Q Consensus       165 ~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  215 (240)
                      ..|...++.+++.-|...++.|++.|+. +.....-+..+.+.+.+++...
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~  239 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCA  239 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHh
Confidence            5688899999999999999999998876 3333333444455555544443

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.17  E-value=1.7e-10  Score=99.71  Aligned_cols=128  Identities=15%  Similarity=0.198  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 026352           71 VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKG  150 (240)
Q Consensus        71 ~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~  150 (240)
                      -++.+..+..++.+|+++..+++.+++.+|+..++.++..||.++.+      ++++.+++.|++++.+.+..+.+    
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~~~s~~~~----  238 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTMGDSKQNS----  238 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEeccccccc----
Confidence            35788889999999999999999999999999999999999999988      79999999999888765332211    


Q ss_pred             CCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchh---HHHHHHHHHHHHHHHHHHH
Q 026352          151 APIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKL---SISAWMNCIGAAQSAVYTI  215 (240)
Q Consensus       151 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~  215 (240)
                             +....+...|+++++++++.||+|+++.||..+++....   .+-.+..++..+++.|...
T Consensus       239 -------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~  299 (416)
T KOG2765|consen  239 -------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI  299 (416)
T ss_pred             -------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence                   112334578999999999999999999999766552122   2223334444445554443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.10  E-value=1.2e-09  Score=94.13  Aligned_cols=130  Identities=13%  Similarity=0.148  Sum_probs=107.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      ++++++|+...+..|...+  -++.....++..++++++.+.....+.......+.++|..+...++++....+.+|+++
T Consensus       156 l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~  233 (292)
T PRK11272        156 LIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYL  233 (292)
T ss_pred             HHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678999999999997543  34566778899999988888765433221112356778888888998888899999999


Q ss_pred             hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      +++.++++++.+.+++|++.+++++++++|+++..+      ++|..+.+.|+.+...
T Consensus       234 ~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        234 LRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999      5999999999987653

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.09  E-value=1.8e-09  Score=93.16  Aligned_cols=129  Identities=11%  Similarity=0.130  Sum_probs=103.8

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +.++++|+...+..|...++ .+|...... ..++++++.++......  ....+...+...+.+|+++..+.+.+++++
T Consensus       154 l~aa~~~a~~~v~~r~~~~~-~~~~~~~~~-~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~  229 (293)
T PRK10532        154 LGAGACWAIYILSGQRAGAE-HGPATVAIG-SLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALPYSLEMIA  229 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcc-CCchHHHHH-HHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56789999999999987654 888777544 45666667676554222  122345556556778999888999999999


Q ss_pred             hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352           82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus        82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      +++++++.++.+.+++|++..++++++++|+++..+      ++|..+.+.|++....+
T Consensus       230 ~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        230 LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999      59999999999776544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.99  E-value=5.3e-08  Score=84.41  Aligned_cols=187  Identities=19%  Similarity=0.159  Sum_probs=137.5

Q ss_pred             HHHHHHHhhhC-CCC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 026352           11 VYFLTEDSFNQ-GLN--PHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHP   87 (240)
Q Consensus        11 ~~i~~k~~~~~-~~~--p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~   87 (240)
                      +.+.-+...+. ...  |..+++.++....+.-.+.....++++.   +++.++.....+++.. +...+-+.+++|+|.
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~al~~i~~   90 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLFF-LASVLSNAALKYISY   90 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHHH-HHHHHHHHHHHhCCh
Confidence            44455544433 344  8899999999988877665543221222   2334556666777764 788999999999999


Q ss_pred             ceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHH
Q 026352           88 TFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKG  167 (240)
Q Consensus        88 ~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  167 (240)
                      ..-.++-+..|+.+++++.+++|+|.+.++      +.++++..+|+.+....+....+.         .+....+...|
T Consensus        91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~---------~~~~~~~~~~G  155 (303)
T PF08449_consen   91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS---------SNSSSFSSALG  155 (303)
T ss_pred             HHHHHHhhhHHHHHHHHHHHhcCccccHHH------HHHHHHHHhhHheeeecccccccc---------cccccccchhH
Confidence            888888899999999999999999999999      599999999998876543211110         01111222349


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHh
Q 026352          168 SILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTII  216 (240)
Q Consensus       168 ~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~  216 (240)
                      +++.+.+.++-+...+.++|..++++ ++.....+..+++.+..++....
T Consensus       156 ~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~  205 (303)
T PF08449_consen  156 IILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFL  205 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999876543 47788899999999888777766

; GO: 0055085 transmembrane transport

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.95  E-value=7.3e-09  Score=89.45  Aligned_cols=126  Identities=9%  Similarity=0.082  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +.++++|+...+..|...++ .+|....   +..+++.+.+..... .......+.+.|..+...++ ...+.+.+|+++
T Consensus       162 l~aa~~~A~~~v~~k~~~~~-~~~~~~~---~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~-~t~~~~~l~~~a  235 (295)
T PRK11689        162 FIGAFIWAAYCNVTRKYARG-KNGITLF---FILTALALWIKYFLS-PQPAMVFSLPAIIKLLLAAA-AMGFGYAAWNVG  235 (295)
T ss_pred             HHHHHHHHHHHHHHhhccCC-CCchhHH---HHHHHHHHHHHHHHh-cCccccCCHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            57889999999999986544 7887653   233444444433332 22122355677777777775 456799999999


Q ss_pred             hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      ++++++++++.+.+++|++..++++++++|+++..+      ++|.++.+.|+.+...
T Consensus       236 l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        236 ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999      5999999999977653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.91  E-value=1.3e-08  Score=87.26  Aligned_cols=127  Identities=13%  Similarity=0.055  Sum_probs=87.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHH----HHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHI----YVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNL   77 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~----~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   77 (240)
                      ++++++|+...+..|...++ .+|..    ...+.+...++.+.+....++++.. ..+...+......+.+...+.+.+
T Consensus       150 l~aal~~a~~~i~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~l~~~l  227 (281)
T TIGR03340       150 LAAALGTAIYSLSDKAAALG-VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM-FPYARQILPSATLGGLMIGGAYAL  227 (281)
T ss_pred             HHHHHHHHHhhhhccccccc-hhcccccHHHHHHHHHHHHHHHHHHHHHHhccch-hhhHHHHHHHHHHHHHHHHHHHHH
Confidence            56788999999998875432 44432    2233333332222222221121111 112233344455566666689999


Q ss_pred             HHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352           78 YFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV  136 (240)
Q Consensus        78 ~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~  136 (240)
                      +++++++.+++.++.+.+++|++..++++++++|+++..+      ++|..+.++|+.+
T Consensus       228 ~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~------~iG~~lil~Gv~l  280 (281)
T TIGR03340       228 VLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTR------LMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999      5999999999865

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.87  E-value=3.4e-08  Score=87.53  Aligned_cols=129  Identities=9%  Similarity=0.190  Sum_probs=97.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChH-HHHHHHHHHHHHHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPH-IYVTYRHAAGSLMMFPFAYFLERKIR----PKLTLAVFLEIFLLSLLGVSLALN   76 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~-~~~~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~   76 (240)
                      +.++++|+...+..|...+. .||. ...++...++++.+.+.....++...    ...+.. ...++..++. ..+.+.
T Consensus       195 l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-t~lay~  271 (358)
T PLN00411        195 TIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-TSVYYV  271 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-HHHHHH
Confidence            46788999999999987665 6554 56667777777766655554333211    112222 2234445554 457888


Q ss_pred             HHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           77 LYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        77 ~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      ++++++++.+++.++.+.+++|++++++++++++|++++.+      ++|.++.+.|+.+...
T Consensus       272 lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        272 IHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999      6999999999988653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.83  E-value=5.9e-08  Score=83.91  Aligned_cols=130  Identities=9%  Similarity=0.146  Sum_probs=98.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCCh---HHHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNP---HIYVTYRHAAGSLMMFPFAYFLERKI-----RPKLTLAVFLEIFLLSLLGVSL   73 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p---~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~   73 (240)
                      +.++++|+...+..|...++ .++   .....+-...+.+.+.......++..     ....+.+.|..++.+|+++...
T Consensus       149 l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~  227 (299)
T PRK11453        149 LAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIV  227 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHH
Confidence            57889999999999986543 322   23334444444443333322222211     1234667888889999999989


Q ss_pred             HHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           74 ALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        74 ~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      .+.+++.++++.++++++.+.+++|++..++++++++|+++..+      ++|..+.++|+.+..
T Consensus       228 ~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~  286 (299)
T PRK11453        228 GYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999      599999999997643

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.74  E-value=3.5e-08  Score=85.38  Aligned_cols=132  Identities=11%  Similarity=0.168  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC---------CCHHH-HHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQ-GLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPK---------LTLAV-FLEIFLLSLLG   70 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~---------~~~~~-~~~~~~~g~~~   70 (240)
                      ++++++|+...+..|...++ +.||..+..+....+.+.++|+....+......         ..... +...+..+...
T Consensus       151 l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (302)
T TIGR00817       151 MISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGF  230 (302)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHH
Confidence            56889999999999987651 499999999999999999999876533211000         00011 11122333322


Q ss_pred             HHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           71 VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        71 ~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      ....+.+++.+++++++..+++.....|++++++++++++|+++..+      ++|..+.+.|+.+...
T Consensus       231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence            33344677889999999999999999999999999999999999999      5999999999977653

specificities overlap.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.73  E-value=2.9e-07  Score=77.40  Aligned_cols=152  Identities=15%  Similarity=0.190  Sum_probs=112.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHH
Q 026352           56 TLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVM  135 (240)
Q Consensus        56 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~  135 (240)
                      ++|+..+..+-+++.. ..+.+.+.++++.+++.-.++..+-.+++++++++++|+|++.+||      .++.+-++|+.
T Consensus        13 ~~~~~~~~~vPA~lY~-~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW------~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYA-IQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQW------LALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHh
Confidence            4567777777788864 7999999999999999999999999999999999999999999995      99999999997


Q ss_pred             HHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHH
Q 026352          136 VIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYT  214 (240)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~  214 (240)
                      ++...+.+..+..++++..  .+..+.+...|.++.+.++++-+.-.++.+|..|+.+ +....+...+++|.+..++..
T Consensus        86 lv~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~  163 (244)
T PF04142_consen   86 LVQLSSSQSSDNSSSSSVH--HDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLAL  163 (244)
T ss_pred             eeecCCccccccccccccc--cccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHH
Confidence            7643311110000000000  0111234578999999999999999999999877652 355666677777777776654


Q ss_pred             Hh
Q 026352          215 II  216 (240)
Q Consensus       215 ~~  216 (240)
                      ..
T Consensus       164 ~~  165 (244)
T PF04142_consen  164 LL  165 (244)
T ss_pred             hc
Confidence            43

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.55  E-value=1e-06  Score=76.18  Aligned_cols=130  Identities=12%  Similarity=0.111  Sum_probs=87.0

Q ss_pred             hhHHHHHHHHHHHHHHhhhCC-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQG-LNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ++++++|+...+..|...++. .++.....+-..++.+...+.... ........+...+......|+. ....+.+++.
T Consensus       155 l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~-t~i~~~~~~~  232 (296)
T PRK15430        155 LGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADS-STSHMGQNPMSLNLLLIAAGIV-TTVPLLCFTA  232 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHccC-CcccccCCcHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            567899999999998754321 122333333333333332221100 0000111122233444445654 4579999999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      ++++.+++.++.+.+++|++..++++++++|+++..+      ++|..+.++|+.++..
T Consensus       233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~------~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADK------MVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999      5999999888877653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.48  E-value=2.2e-06  Score=66.44  Aligned_cols=128  Identities=21%  Similarity=0.328  Sum_probs=104.9

Q ss_pred             hhHHHHHHHHHHHHHHhhhC------CCChHHHHHHHHHHHHHHHHHHHHHHhcCCCC----CC-------CHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQ------GLNPHIYVTYRHAAGSLMMFPFAYFLERKIRP----KL-------TLAVFLEIF   64 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~-------~~~~~~~~~   64 (240)
                      +.+.++-+...+..|..+++      ..+|..+..+-...+.++++|.....++.+..    ..       ..+.+..++
T Consensus         6 l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (153)
T PF03151_consen    6 LASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLI   85 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHH
Confidence            45677888889998888766      78999999999999999999988776543310    01       123445566


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352           65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV  136 (240)
Q Consensus        65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~  136 (240)
                      ..|++.. ..+...+.-++++++...++....-.+.+.++++++++|+++.++      +.|+.+++.|..+
T Consensus        86 ~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~  150 (153)
T PF03151_consen   86 LSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence            6677764 799999999999999999999999999999999999999999999      6999999999853

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.47  E-value=2.6e-06  Score=75.39  Aligned_cols=130  Identities=13%  Similarity=0.177  Sum_probs=94.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhC------CCChHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------CCCCHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQ------GLNPHIYVTYRHAAGSLMMFPFAYFLERKIR-----------PKLTLAVFLEIF   64 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-----------~~~~~~~~~~~~   64 (240)
                      ++++++|+...+..|..+++      ..++..+..+-...++++++|+....+..+.           ............
T Consensus       200 l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i  279 (350)
T PTZ00343        200 MLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKI  279 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHH
Confidence            56789999999999998754      2567767777788999999998764432110           000111111122


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352           65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI  137 (240)
Q Consensus        65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~  137 (240)
                      ..+.+...+.+.+-|++++++++..+++..++.|+++.++++++++|+++..+      ++|..+.+.|+.+.
T Consensus       280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~lY  346 (350)
T PTZ00343        280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHHH
Confidence            22222223445555579999999999999999999999999999999999999      69999999999764

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.46  E-value=8e-07  Score=76.96  Aligned_cols=179  Identities=15%  Similarity=0.122  Sum_probs=137.8

Q ss_pred             HHHHhhh--CCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceee
Q 026352           14 LTEDSFN--QGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMT   91 (240)
Q Consensus        14 ~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~   91 (240)
                      ..|..++  +---|..++..++.++.+.+......+.++..+..++..+..++.+|++.. ....+-..++++.+++..-
T Consensus        35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~-~~~v~~n~Sl~~v~VsF~q  113 (316)
T KOG1441|consen   35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFC-ISHVLGNVSLSYVPVSFYQ  113 (316)
T ss_pred             eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHH-HHHHhcchhhhccchhHHH
Confidence            3566666  333488889999999988887766554333333234456777888888875 6888889999999999999


Q ss_pred             eeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHH
Q 026352           92 AVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILT  171 (240)
Q Consensus        92 ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~  171 (240)
                      .+=.++|+++.++++++.+|+.+...+      ..++....|+.+-...                  ..+.+ ..|...+
T Consensus       114 ~iKa~~P~~tvl~~~~~~~~~~s~~~~------lsL~piv~GV~ias~~------------------e~~fn-~~G~i~a  168 (316)
T KOG1441|consen  114 TIKALMPPFTVLLSVLLLGKTYSSMTY------LSLLPIVFGVAIASVT------------------ELSFN-LFGFISA  168 (316)
T ss_pred             HHHhhcchhHHHHHHHHhCCCCcceEE------EEEEEeeeeEEEeeec------------------ccccc-HHHHHHH
Confidence            999999999999999999999998884      7777777787543311                  01234 6899999


Q ss_pred             HHHHHHHHHHHHHHhhhhh----cCCchhHHHHHHHHHHHHHHH-HHHHhccC
Q 026352          172 VASCILWSSFYIMQAFTLK----KYPAKLSISAWMNCIGAAQSA-VYTIIVQP  219 (240)
Q Consensus       172 l~a~~~~a~~~v~~k~~~~----~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~  219 (240)
                      +.+.+..+..+++.|+..+    +. +++....++.-++.+.++ |.....|+
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~  220 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEG  220 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcc
Confidence            9999999999999999763    24 578888888889988888 77665544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.46  E-value=3.1e-06  Score=71.77  Aligned_cols=126  Identities=14%  Similarity=0.230  Sum_probs=97.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVT-YRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      +.+++.|+...+..|... + .++..... +....+.....+...  ..+. ...+.+++......|+++....+.+++.
T Consensus       160 l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~  234 (292)
T COG0697         160 LAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYY  234 (292)
T ss_pred             HHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567889999999998765 3 77777776 444422232222221  1111 2345677888888899987679999999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      +++..+++..+.+.++.|++..++++++++|+++.++      ++|..+.+.|+.+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~  286 (292)
T COG0697         235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999      599988888887654

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.41  E-value=8.4e-09  Score=85.16  Aligned_cols=187  Identities=19%  Similarity=0.254  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHHhhhCCCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026352            7 CVASVYFLTEDSFNQGLN-PHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYV   85 (240)
Q Consensus         7 ~wg~~~i~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~   85 (240)
                      +-+.++.....+-+ ++| |..-.+.-+..-+++-.++..+|.  +..   ...|...++++++..- .+.+...+.|||
T Consensus        30 ~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~---~~~~~hYilla~~DVE-aNy~vV~AyQyT  102 (336)
T KOG2766|consen   30 ITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--KYI---KAKWRHYILLAFVDVE-ANYFVVKAYQYT  102 (336)
T ss_pred             HHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--HHH---HHHHHHhhheeEEeec-ccEEEeeehhhc
Confidence            33444444444333 343 667777888777777777776632  211   2234457777888764 565667899999


Q ss_pred             CcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchh
Q 026352           86 HPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWL  165 (240)
Q Consensus        86 ~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (240)
                      +.+....+-.-.-+-+.+++|+++|-|-.+.+      +.|+++|..|++++++.+-..           ++..++.+..
T Consensus       103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~a-----------gd~aggsnp~  165 (336)
T KOG2766|consen  103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVHA-----------GDRAGGSNPV  165 (336)
T ss_pred             chHHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeecc-----------ccccCCCCCc
Confidence            98888877655444556789999999988887      799999999998887542111           1223345557


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          166 KGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       166 ~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      +||++.++++.+||..++..+...|+. +...++....++|++++.+- ..++.
T Consensus       166 ~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ-~i~~~  217 (336)
T KOG2766|consen  166 KGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQ-FIFER  217 (336)
T ss_pred             cCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHH-Hhhhc
Confidence            899999999999999999999999998 47788889999999999877 55555

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.40  E-value=2.4e-06  Score=73.72  Aligned_cols=122  Identities=10%  Similarity=0.077  Sum_probs=91.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHH---HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHA---AGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLY   78 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~---~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   78 (240)
                      +++.+.++...+..|..  + .||....+....   +++.++.+..  +  +.+|. ..+......+.|++ ....+.+|
T Consensus       158 l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~~-~~~~~~~~~~~Gi~-~~ia~~~y  228 (290)
T TIGR00776       158 LMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH--I--LAKPL-KKYAILLNILPGLM-WGIGNFFY  228 (290)
T ss_pred             HHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH--h--cccch-HHHHHHHHHHHHHH-HHHHHHHH
Confidence            46788999999999964  3 889888554444   4444433322  1  11222 23344445558888 46899999


Q ss_pred             HHhhc-ccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccch----hhHHHHHHHHHHHH
Q 026352           79 FASMK-YVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKI----LGTLASLVGVMVIA  138 (240)
Q Consensus        79 ~~~l~-~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~----~g~~i~~~G~~~~~  138 (240)
                      +.+.+ +.+++.++++.+.+|+...+.+++++||+.++++      +    +|.++.+.|+.++.
T Consensus       229 ~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       229 LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence            99999 9999999999999999999999999999999999      6    88888888887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.38  E-value=9.8e-07  Score=65.19  Aligned_cols=68  Identities=19%  Similarity=0.199  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      ..++++....+.++..++++.|.+.+..+.++.|+++.+.+++++|||++.++      ++|+.+.++|++++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            34446666799999999999999999999999999999999999999999999      599999999997764

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.30  E-value=0.00028  Score=61.39  Aligned_cols=199  Identities=14%  Similarity=0.094  Sum_probs=137.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhCC---CChHHHHHHHHHHHHHHHHHHHHHHhcC---C-CCC------CCHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQG---LNPHIYVTYRHAAGSLMMFPFAYFLERK---I-RPK------LTLAVFLEIFLLSL   68 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~---~-~~~------~~~~~~~~~~~~g~   68 (240)
                      ++..+.++......|+.-..+   +.|....+.--++-.++.....+...|+   + .+.      ..+++.....+-++
T Consensus        21 ~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~  100 (345)
T KOG2234|consen   21 IVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPAL  100 (345)
T ss_pred             HHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHH
Confidence            344566777788888876655   6677777777777766665555544322   1 111      13445556666666


Q ss_pred             HHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCC
Q 026352           69 LGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSL  148 (240)
Q Consensus        69 ~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~  148 (240)
                      +. ++.+.++|.++.+.+++.-.+...+--+-++++..+++++|++++||      .++++.+.|+.++-....+..+. 
T Consensus       101 iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw------~Al~lL~~Gv~~vQ~~~~~~~~a-  172 (345)
T KOG2234|consen  101 IY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQW------MALVLLFAGVALVQLPSLSPTGA-  172 (345)
T ss_pred             HH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHH------HHHHHHHHHHHHHhccCCCCCCc-
Confidence            75 47888999999999999999999999999999999999999999995      99999999997764211111100 


Q ss_pred             CCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHH
Q 026352          149 KGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTI  215 (240)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~  215 (240)
                             .++....+...|....+.++..=+.-.++.+|+.|+-. +....+.-.+++|.+..+....
T Consensus       173 -------~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~  233 (345)
T KOG2234|consen  173 -------KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL  233 (345)
T ss_pred             -------cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence                   01122344578999999999999999999999886532 2444555555566655544443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.08  E-value=2e-05  Score=65.32  Aligned_cols=125  Identities=11%  Similarity=0.125  Sum_probs=101.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +.+..+|+..-+.+|.+-+. .+--.-...-+.+|+++.+|+..-+...  .-.+.+....-+..+++...+.|.+-..+
T Consensus       154 l~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~--~l~~p~ll~laLgvavlSSalPYsLEmiA  230 (292)
T COG5006         154 LGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGP--ALFSPSLLPLALGVAVLSSALPYSLEMIA  230 (292)
T ss_pred             HHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcch--hhcChHHHHHHHHHHHHhcccchHHHHHH
Confidence            45778999999999987643 5666677888999999999987543221  12344555666778899999999999999


Q ss_pred             hcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHH
Q 026352           82 MKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVM  135 (240)
Q Consensus        82 l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~  135 (240)
                      ++..+...-+++.+++|.+.++.++++++|+++..||      +++...+++..
T Consensus       231 L~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qw------laI~~ViaAsa  278 (292)
T COG5006         231 LRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQW------LAIAAVIAASA  278 (292)
T ss_pred             HhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHH------HHHHHHHHHHh
Confidence            9999999999999999999999999999999999995      88777666553

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.06  E-value=5.5e-05  Score=63.74  Aligned_cols=185  Identities=14%  Similarity=0.151  Sum_probs=126.0

Q ss_pred             HHHHHHHHhhh---CCCC----hHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------------CCHHHHHHHHHHHHH
Q 026352           10 SVYFLTEDSFN---QGLN----PHIYVTYRHAAGSLMMFPFAYFLERKIRPK-------------LTLAVFLEIFLLSLL   69 (240)
Q Consensus        10 ~~~i~~k~~~~---~~~~----p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~~   69 (240)
                      .+.+.+|++-+   +|-|    |+..+..-|+--++.+..+.+++.|...+.             .+.+... .+.-+++
T Consensus        17 ~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l-fl~Pal~   95 (372)
T KOG3912|consen   17 FNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL-FLPPALC   95 (372)
T ss_pred             HHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce-ecChHHH
Confidence            45667776532   1223    555555555555666666666654432211             0122211 2224556


Q ss_pred             HHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCC
Q 026352           70 GVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLK  149 (240)
Q Consensus        70 ~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~  149 (240)
                      .. ....+.|.|+.+|+++.-..+-...-+++.+++..++|++++.+||      +|+.....|.+.+...+-....++ 
T Consensus        96 Di-~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qW------l~i~fv~lGlviVg~~d~~~~~~p-  167 (372)
T KOG3912|consen   96 DI-AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQW------LGILFVSLGLVIVGSLDVHLVTDP-  167 (372)
T ss_pred             HH-hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhH------HHHHHHHhhhheeeeeecccccCC-
Confidence            54 5778889999999999888888889999999999999999999995      999999999977643210000000 


Q ss_pred             CCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHH
Q 026352          150 GAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSA  211 (240)
Q Consensus       150 ~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~  211 (240)
                              ...-.+...|+.+.+.+-+.-|...++-+|..++.. +|.....|+-++|.+.+.
T Consensus       168 --------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~s  222 (372)
T KOG3912|consen  168 --------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILS  222 (372)
T ss_pred             --------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHH
Confidence                    001134578999999999999999999999776542 589999999999955443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=97.83  E-value=0.00017  Score=61.42  Aligned_cols=170  Identities=15%  Similarity=0.171  Sum_probs=107.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHH
Q 026352           25 PHIYVTYRHAAGSLMMFPFAYFLERKI---RPKLTLAVF-LEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCM  100 (240)
Q Consensus        25 p~~~~~~R~~~a~l~l~~~~~~~~~~~---~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~  100 (240)
                      |+.++.....+-.++-...-...+++.   +...+|++- ++...+|+.. +..-.+-.++++|++.+.-+..=++.++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence            777777776665554433322222211   224566654 4566677765 57888999999999999999999999999


Q ss_pred             HHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHH----HHH
Q 026352          101 TFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVA----SCI  176 (240)
Q Consensus       101 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~----a~~  176 (240)
                      +.+++..+.-||.++.-      ..-.++..+|+.+.+.. .                 .+.+ ..|..++++    +++
T Consensus       124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~K-s-----------------Tqf~-i~Gf~lv~~aS~~sGl  178 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYK-S-----------------TQFN-IEGFFLVLAASLLSGL  178 (349)
T ss_pred             HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEec-c-----------------ccee-ehhHHHHHHHHHhhhh
Confidence            99999999999988753      23333333444443322 1                 1222 456666654    455


Q ss_pred             HHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352          177 LWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQPK  220 (240)
Q Consensus       177 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  220 (240)
                      -|+....+.|+-....++|........-.-.+.++|....+|+.
T Consensus       179 RW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~  222 (349)
T KOG1443|consen  179 RWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGL  222 (349)
T ss_pred             hHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHccc
Confidence            56666666665442223566666655556666677877778774

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.81  E-value=0.00027  Score=62.02  Aligned_cols=132  Identities=18%  Similarity=0.088  Sum_probs=99.1

Q ss_pred             ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHHHHHHH
Q 026352            1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKL--TLAVFLEIFLLSLLGVSLALNLY   78 (240)
Q Consensus         1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~   78 (240)
                      ++.+++++|.+.+.-|+..++ .|+.++...=-+++.++..+.....+|+...+.  +.+....++.-+ +..+..+.+.
T Consensus       173 ~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~-~~lf~~y~l~  250 (334)
T PF06027_consen  173 ALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA-LCLFLFYSLV  250 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH-HHHHHHHHHH
Confidence            367899999999999998876 898888777677777777776666666554333  333333222222 2334566666


Q ss_pred             HHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352           79 FASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus        79 ~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      -..+++++|+...+=.-+..++..++++++++|++++..      ++|.++..+|.++....
T Consensus       251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLA  306 (334)
T ss_pred             HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEcc
Confidence            778999999988887888999999999999999999987      69999999999776543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.75  E-value=5.3e-05  Score=57.44  Aligned_cols=70  Identities=19%  Similarity=0.390  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHH--HhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           63 IFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVV--FRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        63 ~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~--~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      .+..|+....+.+.++..++++.+.+.+.-+.+..+.++.+.++.  +++|++++++      ++|+.+.++|++++.
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~  121 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence            456778888899999999999999999999999998888888885  7999999999      599999999998865

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.64  E-value=0.0017  Score=55.80  Aligned_cols=190  Identities=17%  Similarity=0.172  Sum_probs=132.7

Q ss_pred             hHHHHHHHHH----HHHHHhhhC-CCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026352            3 LLQICVASVY----FLTEDSFNQ-GLNPHIY-VTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALN   76 (240)
Q Consensus         3 ~~~~~wg~~~----i~~k~~~~~-~~~p~~~-~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   76 (240)
                      .+++.++.+.    ++-|.++.+ +.|.... ..++.....+.+...-.. +--+.++++++..++.+...++.. +...
T Consensus        15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~~~l~~~~~kk~~P~~~lf~-~~i~   92 (314)
T KOG1444|consen   15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNFRPLDLRTAKKWFPVSLLFV-GMLF   92 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeecCCcChHHHHHHccHHHHHH-HHHH
Confidence            3455555544    456777765 3443332 247777666665543221 111134577787777777777754 5666


Q ss_pred             HHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccC
Q 026352           77 LYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLG  156 (240)
Q Consensus        77 ~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~  156 (240)
                      .-..+++|.+...-+++=...|+++++....+++.|.+...      +..+....+|.......+               
T Consensus        93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~~d---------------  151 (314)
T KOG1444|consen   93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAFTD---------------  151 (314)
T ss_pred             HccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcccc---------------
Confidence            66779999999999999999999999999999997777666      488888887775543221               


Q ss_pred             CCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          157 TNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       157 ~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                         ...+ ..|..+.+...++-+.+.+..|+..+... +...++.+..+.+.........++|+
T Consensus       152 ---~sf~-~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge  211 (314)
T KOG1444|consen  152 ---LSFN-LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGE  211 (314)
T ss_pred             ---ceec-chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcc
Confidence               1122 35899999999999999999999765421 35677888888888888777777765

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.53  E-value=0.00014  Score=58.33  Aligned_cols=96  Identities=18%  Similarity=0.270  Sum_probs=81.3

Q ss_pred             HHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 026352           73 LALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAP  152 (240)
Q Consensus        73 ~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~  152 (240)
                      ..+..|..+++..+++.++.+.....-++.+++++.+++|....+      +++.+++..|++++... +          
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~-D----------  127 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYA-D----------  127 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEec-c----------
Confidence            567788999999999999999999999999999999999998877      79999999888765422 1          


Q ss_pred             cccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 026352          153 IHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKK  191 (240)
Q Consensus       153 ~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~  191 (240)
                            ....+.+.|..++..++..-|+|.++-|+...+
T Consensus       128 ------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn  160 (290)
T KOG4314|consen  128 ------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGN  160 (290)
T ss_pred             ------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence                  122334789999999999999999999987654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.50  E-value=0.017  Score=49.08  Aligned_cols=126  Identities=17%  Similarity=0.144  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchh---hHHHHHHH
Q 026352           58 AVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKIL---GTLASLVG  133 (240)
Q Consensus        58 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~---g~~i~~~G  133 (240)
                      +.+..-++.|++= ...+...+.+.++.+.+++.=+. ...=+.+.+.+.++++|.-+.+++     ++   ++++.++|
T Consensus        43 ~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~-----~~G~~Al~liiiG  116 (269)
T PF06800_consen   43 TSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQK-----IIGFLALVLIIIG  116 (269)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchH-----HHHHHHHHHHHHH
Confidence            6777777777775 57999999999999999998775 456666888999999998877664     43   44555667


Q ss_pred             HHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHH
Q 026352          134 VMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMN  203 (240)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~  203 (240)
                      +.+....++++..           .+...+...|....+.+++.|-.|.++.|..  +. ++...-.-|.
T Consensus       117 v~lts~~~~~~~~-----------~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~-~~~~~~lPqa  172 (269)
T PF06800_consen  117 VILTSYQDKKSDK-----------SSSKSNMKKGILALLISTIGYWIYSVIPKAF--HV-SGWSAFLPQA  172 (269)
T ss_pred             HHHhccccccccc-----------cccccchhhHHHHHHHHHHHHHHHHHHHHhc--CC-ChhHhHHHHH
Confidence            7654433221110           0112344679999999999999999998763  33 3555555443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00688 rarD rarD protein

Probab=97.35  E-value=0.0024  Score=53.80  Aligned_cols=102  Identities=7%  Similarity=0.086  Sum_probs=66.1

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI--RPKLTLAVFLEIFLLSLLGVSLALNLYF   79 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (240)
                      +.++++|+...+..|...++  ++......... ......+.... ....  ......++|..++..|++ ....+.+++
T Consensus       152 l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~  226 (256)
T TIGR00688       152 LVLAFSFTAYGLIRKALKNT--DLAGFCLETLS-LMPVAIYYLLQ-TDFATVQQTNPFPIWLLLVLAGLI-TGTPLLAFV  226 (256)
T ss_pred             HHHHHHHHHHHHHHhhcCCC--CcchHHHHHHH-HHHHHHHHHHH-hccCcccccCchhHHHHHHHHHHH-HHHHHHHHH
Confidence            56789999999999875432  33222221111 11111111111 1111  111223578888888887 458999999


Q ss_pred             HhhcccCcceeeeeccchhHHHHHHHHHH
Q 026352           80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVF  108 (240)
Q Consensus        80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~  108 (240)
                      +++++.+++.++.+.+++|++..+++.+.
T Consensus       227 ~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       227 IAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999998754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.16  E-value=0.023  Score=50.15  Aligned_cols=165  Identities=17%  Similarity=0.218  Sum_probs=102.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHH-HHHHHHHHHH--HHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHA-AGSLMMFPFA--YFLERKI---RPKLTLAVFLEIFLLSLLGVSLAL   75 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~-~a~l~l~~~~--~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~   75 (240)
                      +++.++||+.++-.|. .++ .+ .+.-+.-.. ++. ++.|+.  ....+..   ....+.+.+..-++.|.+= ...+
T Consensus        13 ~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~w-l~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~W-~iG~   87 (345)
T PRK13499         13 LIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSW-LILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGALW-GIGG   87 (345)
T ss_pred             HHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHHH-Hhhh
Confidence            4688999999999997 332 33 222222111 111 111211  1111110   1124556667767777765 4799


Q ss_pred             HHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccc---cccCCCCccchhhHHHHHHHHHHHHHh---cCCCCCCC
Q 026352           76 NLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIV---DVRSPRGIAKILGTLASLVGVMVIAFY---KGPAVPSL  148 (240)
Q Consensus        76 ~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~---~~~~~~~~~~~~g~~i~~~G~~~~~~~---~~~~~~~~  148 (240)
                      ..++.++++.+.+.+.-+ ..+.-+...+++.++++|-.   +-++  .+.-++|+++.++|+.+....   +++.... 
T Consensus        88 i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~-  164 (345)
T PRK13499         88 ITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQLKERKMGI-  164 (345)
T ss_pred             hhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhhccccccc-
Confidence            999999999999988765 56788888889998888754   3333  233468888889999876541   1111000 


Q ss_pred             CCCCcccCCCccccchhHHHHHHHHHHHHHHHHH
Q 026352          149 KGAPIHLGTNSVHENWLKGSILTVASCILWSSFY  182 (240)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~  182 (240)
                              ++..+.+..+|.++++.+++.++.|.
T Consensus       165 --------~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        165 --------KKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             --------ccccccchHhHHHHHHHHHHHHHHHH
Confidence                    00123455789999999999999999

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.11  E-value=0.0014  Score=48.34  Aligned_cols=110  Identities=15%  Similarity=0.108  Sum_probs=76.0

Q ss_pred             ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ++++.++||.+..+.|.+.+. .++..-.. |..-....     +           .+++.+.+  .+...-.....|++
T Consensus         1 ~l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~i--pf~lNq~GSv~f~~   60 (113)
T PF10639_consen    1 LLLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKYII--PFLLNQSGSVLFFL   60 (113)
T ss_pred             CeeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHHHH--HHHHHHHHHHHHHH
Confidence            567899999999999998865 55544331 32111111     0           11222322  22223368888999


Q ss_pred             hhcccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352           81 SMKYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV  136 (240)
Q Consensus        81 ~l~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~  136 (240)
                      .+...+.+.+.-+. ++.=+++++.++++.+|..++++      ++|+.+.+.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeee
Confidence            99999999999885 77888888888877777777776      5999999988754

Many members are annotated as potential transmembrane proteins.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.07  E-value=0.0097  Score=50.31  Aligned_cols=173  Identities=16%  Similarity=0.124  Sum_probs=111.0

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccch
Q 026352           24 NPHIYVTYRHAAGSLMMFPFAYFLER----KIRPK--LTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTI   97 (240)
Q Consensus        24 ~p~~~~~~R~~~a~l~l~~~~~~~~~----~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~   97 (240)
                      .|....+++.++...+-..+-....+    ...|+  ++.+..+.+.-+.+.-. +.-.+-...++|.+++.--+--++.
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL~yVgVaFYyvgRsLt  138 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCLKYVGVAFYYVGRSLT  138 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee-eehhccceehhhcceEEEEeccchh
Confidence            37778888877766554443322111    11222  33333333333333322 2333345788999988877778899


Q ss_pred             hHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHH
Q 026352           98 PCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCIL  177 (240)
Q Consensus        98 P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~  177 (240)
                      -+|+.+++++++|+|-+..-      ..+..+.+.|--+     |-.++           ...+.-...|.+++..|.++
T Consensus       139 tvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~l-----GvdqE-----------~~~~~ls~~GvifGVlaSl~  196 (347)
T KOG1442|consen  139 TVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGL-----GVDQE-----------GSTGTLSWIGVIFGVLASLA  196 (347)
T ss_pred             hhHHHHhHHhhccccccccc------ceeehhheehhee-----ccccc-----------cccCccchhhhHHHHHHHHH
Confidence            99999999999999988766      3444333333311     21110           01122236899999999999


Q ss_pred             HHHHHHHHhhhhhcC-CchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          178 WSSFYIMQAFTLKKY-PAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       178 ~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      -|+..+..||..... +.....+.+..+.+.++++|...+.++
T Consensus       197 vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge  239 (347)
T KOG1442|consen  197 VALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE  239 (347)
T ss_pred             HHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch
Confidence            999999999875543 236689999999999999998887655

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.90  E-value=0.0074  Score=49.95  Aligned_cols=131  Identities=15%  Similarity=0.096  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCC
Q 026352           71 VSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKG  150 (240)
Q Consensus        71 ~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~  150 (240)
                      ..+.+..-..+++|.|=-...+--+.-|+=++++++++.+++-+|++      -..+++.++|+.+....++...+    
T Consensus        95 YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~g----  164 (337)
T KOG1580|consen   95 YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVGG----  164 (337)
T ss_pred             HHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHH------HHHHHHHHHHHHHhhccccccCC----
Confidence            34677788899999986555555678899999999999999988888      49999999999886544332211    


Q ss_pred             CCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          151 APIHLGTNSVHENWLKGSILTVASCILWSSFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       151 ~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                              ..+.....|+++.+++-..=++....+.++++.+. +.-+++.+..+.+.+.+..-.+++++
T Consensus       165 --------~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE  226 (337)
T KOG1580|consen  165 --------AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE  226 (337)
T ss_pred             --------CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh
Confidence                    12334568999999999999999999999876542 35578888888888877665555543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.83  E-value=0.014  Score=50.64  Aligned_cols=130  Identities=16%  Similarity=0.216  Sum_probs=97.8

Q ss_pred             hhHHHHHHHHHHHHHHhhh-CCCChHHHHHHHHHHHHHHHHHHHHH--Hhc-CCCCC---CCHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFN-QGLNPHIYVTYRHAAGSLMMFPFAYF--LER-KIRPK---LTLAVFLEIFLLSLLGVSLA   74 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~--~~~-~~~~~---~~~~~~~~~~~~g~~~~~~~   74 (240)
                      ++..++-|...+.-|...+ ++.++.+..++-...+.+..++....  .+. ++..+   ...+.+..++...+.+. ..
T Consensus       160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~-~g  238 (303)
T PF08449_consen  160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGA-LG  238 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHH-HH
Confidence            3456667777887777774 47899999999999998887776655  211 11000   11223455566666664 57


Q ss_pred             HHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           75 LNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        75 ~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      +.+.+.-.+..++...+++..+--+.+.+++.+++++++++.+|      .|+++.+.|..+=.
T Consensus       239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~------~G~~lv~~g~~~~~  296 (303)
T PF08449_consen  239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQW------IGIVLVFAGIFLYS  296 (303)
T ss_pred             HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHH------HHHHHhHHHHHHHH
Confidence            77777888999999999999999999999999999999999995      99999999996643

; GO: 0055085 transmembrane transport

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=96.73  E-value=0.038  Score=47.11  Aligned_cols=126  Identities=14%  Similarity=0.147  Sum_probs=88.1

Q ss_pred             hHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            3 LLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKI--RPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         3 ~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ..++-||..+..=|..   .+|+.+=...-...-.+.-+.+....+...  ...-+.+.+..+...|.+. ++...+|..
T Consensus       155 ~la~sf~~Ygl~RK~~---~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vT-avpL~lf~~  230 (293)
T COG2962         155 ALALSFGLYGLLRKKL---KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVT-AVPLLLFAA  230 (293)
T ss_pred             HHHHHHHHHHHHHHhc---CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHH-HHHHHHHHH
Confidence            4566777777776642   367665444444443333333332222211  1112446677788889886 489999999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      |-+.++-+..+.++|.+|.+..+++.++++|+++..+      ....+..-.|.++..
T Consensus       231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~------~~~F~~IW~aL~l~~  282 (293)
T COG2962         231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQ------LVTFAFIWLALALFS  282 (293)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988      476666666776554

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.55  E-value=0.01  Score=50.41  Aligned_cols=108  Identities=10%  Similarity=0.028  Sum_probs=71.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMF-PFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      ++..+.+.....+.|..  + +||.....-+ .++-++-. .+....+++.+   .++.++. .+.|++- ...+.+++.
T Consensus       144 l~stigy~~Y~~~~~~~--~-~~~~~~~lPq-aiGm~i~a~i~~~~~~~~~~---~k~~~~n-il~G~~w-~ignl~~~i  214 (269)
T PF06800_consen  144 LISTIGYWIYSVIPKAF--H-VSGWSAFLPQ-AIGMLIGAFIFNLFSKKPFF---EKKSWKN-ILTGLIW-GIGNLFYLI  214 (269)
T ss_pred             HHHHHHHHHHHHHHHhc--C-CChhHhHHHH-HHHHHHHHHHHhhccccccc---ccchHHh-hHHHHHH-HHHHHHHHH
Confidence            45566677777777752  3 7777666544 22222222 22222211112   2233333 4456664 368899999


Q ss_pred             hhcccCcceeeeeccchhHHHHHHHHHHhhccccccCC
Q 026352           81 SMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSP  118 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~  118 (240)
                      +.+..+.+.+-.+..+.+++..+.+.+++||+-++|++
T Consensus       215 s~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~  252 (269)
T PF06800_consen  215 SAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEM  252 (269)
T ss_pred             hHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhH
Confidence            99999999999999999999999999999999887773

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.50  E-value=0.0054  Score=45.81  Aligned_cols=67  Identities=16%  Similarity=0.139  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHhhcccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           67 SLLGVSLALNLYFASMKYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        67 g~~~~~~~~~~~~~~l~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      .+.+....+.++..++++.|.+.+=.+. ...-+.+++.++++++|++++.+      ++|+.+.++|++.+-.
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            3444557888999999999999887664 57888899999999999999999      5999999999987643

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.49  E-value=0.0068  Score=44.58  Aligned_cols=66  Identities=17%  Similarity=0.263  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           68 LLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        68 ~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      +.+....+.++..++++.|.+.+=.+ ..+.-+.+++.++++++|++++.+      ++|+.+.++|++.+..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            44455788888999999999888665 457788889999999999999999      5999999999988753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.11  E-value=0.011  Score=42.94  Aligned_cols=64  Identities=20%  Similarity=0.225  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           69 LGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        69 ~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      .+....+.+.-.++|+.|.+.+=.+ ...--+.+++.++++++|+++..+      ++|+.+.++|++.+-
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk  102 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence            3344688889999999998887544 567888899999999999999998      699999999997764

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.10  E-value=0.0032  Score=53.01  Aligned_cols=126  Identities=13%  Similarity=0.062  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026352            6 ICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYV   85 (240)
Q Consensus         6 ~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~   85 (240)
                      +.=+..+++.|+.-++ .+.+.-..+--.++.+.-+..+.....-.+| -.+|||+.+..+|++|. .+|.+...|+|.-
T Consensus       201 lf~asvyIilR~iGk~-~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP-~cgkdr~l~~~lGvfgf-igQIllTm~lQiE  277 (346)
T KOG4510|consen  201 LFGASVYIILRYIGKN-AHAIMSVSYFSLITLVVSLIGCASIGAVQLP-HCGKDRWLFVNLGVFGF-IGQILLTMGLQIE  277 (346)
T ss_pred             hhhhhHHHHHHHhhcc-ccEEEEehHHHHHHHHHHHHHHhhccceecC-ccccceEEEEEehhhhh-HHHHHHHHHhhhh
Confidence            3334556677764333 6766666666666666555444332322233 35677887888899985 8999999999999


Q ss_pred             CcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352           86 HPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus        86 ~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      -++..+++.++.-++..+.-.++++|.+++..|      .|.++.+...+.+...
T Consensus       278 rAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~------~Ga~~vvsS~v~~a~~  326 (346)
T KOG4510|consen  278 RAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSW------VGAVMVVSSTVWVALK  326 (346)
T ss_pred             ccCCeehhhHHHHHHHHHHHHHHhcCCChHHHh------hceeeeehhHHHHHHH
Confidence            999999999999999999999999999999885      8888877777666654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.08  E-value=0.078  Score=38.88  Aligned_cols=63  Identities=14%  Similarity=0.115  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352           69 LGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI  137 (240)
Q Consensus        69 ~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~  137 (240)
                      .+....+.+.-.++|+.|.+.+=.+ ...--+.+++.+++++||++++.+      ++|+.+.+.|++.+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence            3344678888899999998887644 457778889999999999999999      59999999999765

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.89  E-value=0.27  Score=42.32  Aligned_cols=167  Identities=18%  Similarity=0.185  Sum_probs=108.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeecc----chhH
Q 026352           24 NPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVN----TIPC   99 (240)
Q Consensus        24 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~----~~P~   99 (240)
                      +|..+.+.+-+.+.+.-...  .+.++..+ ...+.|......++.+. +...|-+.+++|.+=  -+-+..    ..|+
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~--l~~~k~~~-~~~apl~~y~~is~tn~-~s~~~~yeaLKyvSy--Ptq~LaKscKmIPV  123 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAM--LKWWKKEL-SGVAPLYKYSLISFTNT-LSSWCGYEALKYVSY--PTQTLAKSCKMIPV  123 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHH--HhcccccC-CCCCchhHHhHHHHHhh-cchHHHHHHHHhccc--hHHHHHHHhhhhHH
Confidence            46666666666666655332  22232221 22345666777788875 788999999999972  222221    4554


Q ss_pred             HHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCccccchhHHHHHHHHHHHHHH
Q 026352          100 MTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNSVHENWLKGSILTVASCILWS  179 (240)
Q Consensus       100 ~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a  179 (240)
                        ++++.++.++|.+.++.     ..+.++ -.|+.+....+... ..         ...++.+...|..++...-+.=+
T Consensus       124 --mlmg~Lvy~~ky~~~eY-----l~~~LI-s~GvsiF~l~~~s~-s~---------~~~g~~ns~~G~~Ll~~~L~fDg  185 (327)
T KOG1581|consen  124 --MLMGTLVYGRKYSSFEY-----LVAFLI-SLGVSIFSLFPNSD-SS---------SKSGRENSPIGILLLFGYLLFDG  185 (327)
T ss_pred             --HHHHHHHhcCccCcHHH-----HHHHHH-HhheeeEEEecCCC-Cc---------cccCCCCchHhHHHHHHHHHHHh
Confidence              46688999999998885     444444 44776654432111 00         12234456789999999998888


Q ss_pred             HHHHHHhhhhhcCC-chhHHHHHHHHHHHHHHHHHH
Q 026352          180 SFYIMQAFTLKKYP-AKLSISAWMNCIGAAQSAVYT  214 (240)
Q Consensus       180 ~~~v~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~  214 (240)
                      ..+..++++-+++. ++..++....+++.+......
T Consensus       186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l  221 (327)
T KOG1581|consen  186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL  221 (327)
T ss_pred             hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhh
Confidence            99999998866531 478889999999988876663

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.83  E-value=0.023  Score=49.53  Aligned_cols=126  Identities=14%  Similarity=0.182  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHhh---hCCCChHHHHHHHHHHHHHHHH-HHHHHHhcCCC----C-CCCHHHHHHHHHHHHHHHHHH
Q 026352            4 LQICVASVYFLTEDSF---NQGLNPHIYVTYRHAAGSLMMF-PFAYFLERKIR----P-KLTLAVFLEIFLLSLLGVSLA   74 (240)
Q Consensus         4 ~~~~wg~~~i~~k~~~---~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~----~-~~~~~~~~~~~~~g~~~~~~~   74 (240)
                      ..+..+.--+..|..+   ++.+|++.+..+---++...++ |+....+....    . ..+...+.. ...+.+. ...
T Consensus       171 s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~sv~~-f~~  248 (316)
T KOG1441|consen  171 SNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-LLNSVLA-FLL  248 (316)
T ss_pred             HHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-HHHHHHH-HHH
Confidence            3445666677788777   3469999999999999999998 87766443222    1 222333333 3334444 467


Q ss_pred             HHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352           75 LNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI  137 (240)
Q Consensus        75 ~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~  137 (240)
                      +..-|..+.+++|-.-++....==+.+...++++++|+++..+      ..|..+++.|+.+=
T Consensus       249 Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y  305 (316)
T KOG1441|consen  249 NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLY  305 (316)
T ss_pred             HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHH
Confidence            8888999999999887777766666667788888999999999      69999999999663

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.74  E-value=0.027  Score=41.05  Aligned_cols=65  Identities=15%  Similarity=0.108  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           68 LLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        68 ~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      +.+....+.+...++|+.|.+.+=.+ ...--+.+++.++++++|++++.+      ++|+.+.++|++.+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            33445688888899999998887654 457788889999999999999999      599999999998764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.70  E-value=0.068  Score=40.90  Aligned_cols=104  Identities=16%  Similarity=0.220  Sum_probs=71.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccc-hhHHHH
Q 026352           24 NPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNT-IPCMTF  102 (240)
Q Consensus        24 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~-~P~~~~  102 (240)
                      +|..-++.-+..+.+.+..+....+++..++.+..+|+ ...-|+++. ....+.....+..+++.+..+.-+ .-+...
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~-~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl  106 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGV-FFVLSNIILVPRLGAALTTILIVAGQLIASL  106 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence            59999999999999998887776544332222222233 334688885 688888899999998888776543 444555


Q ss_pred             HHHHH----HhhccccccCCCCccchhhHHHHHHHHH
Q 026352          103 IIAVV----FRLEIVDVRSPRGIAKILGTLASLVGVM  135 (240)
Q Consensus       103 ll~~~----~~~e~~~~~~~~~~~~~~g~~i~~~G~~  135 (240)
                      ++.++    .-++++++++      ++|+.+.++|+.
T Consensus       107 ~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~  137 (138)
T PF04657_consen  107 LIDHFGLFGAPKRPFSLRR------ILGLALMIAGVI  137 (138)
T ss_pred             HHHHccccCCCCCCCCHHH------HHHHHHHHHHHh
Confidence            55553    2345556555      799999999985

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.64  E-value=0.017  Score=41.06  Aligned_cols=54  Identities=15%  Similarity=0.086  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHHhhcccCcceee-eeccchhHHHHHHHHHHhhccccccCCCCccchhhHHH
Q 026352           70 GVSLALNLYFASMKYVHPTFMT-AVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLA  129 (240)
Q Consensus        70 ~~~~~~~~~~~~l~~~~~~~a~-ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i  129 (240)
                      +....+.++..++|+.+.+.+= +...+..+.+++.+..+++|++++++      +.|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            4456788999999999999885 44568899999999999999999999      477653

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.92  E-value=0.19  Score=44.39  Aligned_cols=132  Identities=13%  Similarity=0.215  Sum_probs=97.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhC---CCChHHHHHHHHHHHHHHHHHHHHHHhc--CC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 026352            2 ILLQICVASVYFLTEDSFNQ---GLNPHIYVTYRHAAGSLMMFPFAYFLER--KI-RPKLTLAVFLEIFLLSLLGVSLAL   75 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~---~~~p~~~~~~R~~~a~l~l~~~~~~~~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~   75 (240)
                      ++.++++|..-++.|.=.++   ++|-..+-.+=-++..++++|...+..+  .+ .+-++..+.-.+++.++++..+.-
T Consensus       253 L~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSD  332 (416)
T KOG2765|consen  253 LLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSD  332 (416)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHH
Confidence            46788999999988875543   3565566666667777777765554222  11 112233445556777899999999


Q ss_pred             HHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           76 NLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        76 ~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      .+|.+|.-.|++-.+++-++++-...++...++.+.+.++..      ++|.+-.++|-+.+..
T Consensus       333 ylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  333 YLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNI  390 (416)
T ss_pred             HHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheec
Confidence            999999999999999988887777777888888888888877      6999999988877653

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.73  E-value=0.016  Score=50.32  Aligned_cols=69  Identities=19%  Similarity=0.323  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352           66 LSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus        66 ~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      .|++...+...+.+.++.+.|++..+-+..+.-++.++++..++|||++++.      +.|..+++.|..+++..
T Consensus        55 ~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   55 IGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe
Confidence            3554445678888999999999998888889999999999999999999999      59999999999877654

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.24  E-value=0.023  Score=49.06  Aligned_cols=70  Identities=20%  Similarity=0.281  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352           65 LLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus        65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      +.|.+-..+....-|.+..+.|++..+-+-++.-+..++++..++|||+++..      .+|..++++|...++..
T Consensus        68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h  137 (335)
T KOG2922|consen   68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH  137 (335)
T ss_pred             HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe
Confidence            34666566788888999999999999999999999999999999999999998      69999999999887765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.20  E-value=0.32  Score=40.54  Aligned_cols=71  Identities=23%  Similarity=0.306  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHH
Q 026352           59 VFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMV  136 (240)
Q Consensus        59 ~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~  136 (240)
                      .|..+.+.++.+. +.+.+.|.-+.+-+|-.-+++..+--+++.+.++++++..++.+||      +|.++.+.|...
T Consensus       240 ~~~~l~l~ai~s~-LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQw------lgtvlVF~aL~~  310 (337)
T KOG1580|consen  240 VFWDLTLLAIASC-LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQW------LGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHH-hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHH------HHHHHHHHHhhh
Confidence            3556677777775 7999999999999999999999999999999999999999999995      999999988754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=92.61  E-value=0.47  Score=36.20  Aligned_cols=54  Identities=19%  Similarity=0.138  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhc------CCchhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352          167 GSILTVASCILWSSFYIMQAFTLKK------YPAKLSISAWMNCIGAAQSAVYTIIVQPK  220 (240)
Q Consensus       167 G~~l~l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  220 (240)
                      |.++++.|.++.+++.++.|+..++      .-++..+..+....+.+.++|...+.|+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~   60 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGP   60 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            6788999999999999999986544      22688999999999999999998888764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.33  E-value=5.7  Score=35.19  Aligned_cols=124  Identities=11%  Similarity=0.065  Sum_probs=68.5

Q ss_pred             HHHHHhhhCCCChHHHHHHHHH---HHHHHHH-HHHHHHh-c-CCC-----CCCC----HHHHHHHHHHHHHHHHHHHHH
Q 026352           13 FLTEDSFNQGLNPHIYVTYRHA---AGSLMMF-PFAYFLE-R-KIR-----PKLT----LAVFLEIFLLSLLGVSLALNL   77 (240)
Q Consensus        13 i~~k~~~~~~~~p~~~~~~R~~---~a~l~l~-~~~~~~~-~-~~~-----~~~~----~~~~~~~~~~g~~~~~~~~~~   77 (240)
                      ...+.+.+.+.||.....-.+.   +++++.- .++..+. | ++.     ++.+    .++.....+.|++= ...+.+
T Consensus       198 ~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W-~~~~~~  276 (345)
T PRK13499        198 PMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMW-YLQFFF  276 (345)
T ss_pred             chhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHH-HHHHHH
Confidence            3444433456777766655554   5544433 3333221 1 211     1112    23333345555554 367778


Q ss_pred             HHHhhcccCcceeee---ec-cchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           78 YFASMKYVHPTFMTA---VV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        78 ~~~~l~~~~~~~a~i---i~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      |..+-+..+.+.+.+   +. .+.-++..+-+. ++||+=+..+..-+.-++|+++-++|.+++.
T Consensus       277 y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig  340 (345)
T PRK13499        277 YAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVG  340 (345)
T ss_pred             HHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence            888888776655555   54 555566666666 5899877322222444678888888887654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=91.88  E-value=0.12  Score=37.59  Aligned_cols=42  Identities=24%  Similarity=0.417  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          176 ILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       176 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      ++|+.+.+..|+..++. +|...+.+++..+++ .++.....++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~   42 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGR   42 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcc
Confidence            47999999999999888 589999999999998 6666666544

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=91.42  E-value=0.046  Score=45.61  Aligned_cols=162  Identities=15%  Similarity=0.180  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026352            3 LLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASM   82 (240)
Q Consensus         3 ~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l   82 (240)
                      +=++.||+...+..+   -+=+|.+-..---+-|.++-+...++  .  .|.++.+.+..-++.|.+= ...+...+-++
T Consensus         9 ~P~l~WGsip~v~~k---~GG~p~qQ~lGtT~GALifaiiv~~~--~--~p~~T~~~~iv~~isG~~W-s~GQ~~Qfka~   80 (288)
T COG4975           9 LPALGWGSIPLVANK---FGGKPYQQTLGTTLGALIFAIIVFLF--V--SPELTLTIFIVGFISGAFW-SFGQANQFKAI   80 (288)
T ss_pred             HHHHHhcccceeeee---cCCChhHhhhhccHHHHHHHHHHhee--e--cCccchhhHHHHHHhhhHh-hhhhhhhhhhe
Confidence            446789998886543   23455554433333333333332222  2  3456666666666666654 47889999999


Q ss_pred             cccCcceeeeec-cchhHHHHHHHHHHhhccccccCCCCccchhhH---HHHHHHHHHHHHhcCCCCCCCCCCCcccCCC
Q 026352           83 KYVHPTFMTAVV-NTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGT---LASLVGVMVIAFYKGPAVPSLKGAPIHLGTN  158 (240)
Q Consensus        83 ~~~~~~~a~ii~-~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~---~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  158 (240)
                      ++.+++++.=+. .+.-+-+.+++++.++|--+..+.     ++|.   ++.++|+.+-. .+++.+.          ++
T Consensus        81 ~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~-----IlG~iAliliviG~~lTs-~~~~~nk----------~~  144 (288)
T COG4975          81 QLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI-----ILGFIALILIVIGIYLTS-KQDRNNK----------EE  144 (288)
T ss_pred             eeeeeeccccccchhhHhhceeeeEEEEeccCcchhH-----HHHHHHHHHHHHhheEee-eeccccc----------cc
Confidence            999999998775 467778889999999998776553     3332   22333332211 1111110          01


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHhhh
Q 026352          159 SVHENWLKGSILTVASCILWSSFYIMQAFT  188 (240)
Q Consensus       159 ~~~~~~~~G~~l~l~a~~~~a~~~v~~k~~  188 (240)
                      +...+.-+|....+.+.+.|-.|.+..+..
T Consensus       145 ~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f  174 (288)
T COG4975         145 ENPSNLKKGIVILLISTLGYVGYVVLFQLF  174 (288)
T ss_pred             cChHhhhhheeeeeeeccceeeeEeeeccc
Confidence            112233456666667777777777766654

>TIGR00803 nst UDP-galactose transporter

Probab=91.31  E-value=0.21  Score=40.99  Aligned_cols=57  Identities=11%  Similarity=-0.010  Sum_probs=50.7

Q ss_pred             HHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHH
Q 026352           72 SLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGV  134 (240)
Q Consensus        72 ~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~  134 (240)
                      +..+.+..+-++|.++..-+....+.++.+.+++.++++|+++..++      .|..+.+.|+
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~------~g~~lV~~~~  219 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFY------LGAILVFLAT  219 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHH------HHHHHHHeee
Confidence            45777888999999999999999999999999999999999999994      8888877765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=91.12  E-value=2.4  Score=35.21  Aligned_cols=121  Identities=13%  Similarity=0.191  Sum_probs=86.4

Q ss_pred             HhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCCc
Q 026352           80 ASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTNS  159 (240)
Q Consensus        80 ~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (240)
                      -+++|.+...-+++-.++-+.++.....+++.|++-.+      ....++.+...+.-. . ++.+..          ..
T Consensus        87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~-w-~D~q~~----------~~  148 (309)
T COG5070          87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVAT-W-GDQQAS----------AF  148 (309)
T ss_pred             cceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhc-c-chhhHH----------HH
Confidence            58899998888888889999999999999999998777      466555555443321 1 221100          00


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHhhhhh--cCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          160 VHENWLKGSILTVASCILWSSFYIMQAFTLK--KYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       160 ~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      .......|.++....++.-+.|-...||..|  +. ....-+++..+.+.-++.....++|+
T Consensus       149 ~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~ed  209 (309)
T COG5070         149 KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFED  209 (309)
T ss_pred             HhcccCCceEEEehhhHhHHHHHHHHHHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhcc
Confidence            0112356899999999999999999988654  22 24567788889998888888888876

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=89.41  E-value=0.68  Score=39.49  Aligned_cols=179  Identities=15%  Similarity=0.105  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcce-eeeeccchhHHHHHH
Q 026352           26 HIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTF-MTAVVNTIPCMTFII  104 (240)
Q Consensus        26 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-a~ii~~~~P~~~~ll  104 (240)
                      ..+++.+|++-+.--++..- +....+++.+.|++.....+  +  +..+.+-.+++++-=+-. =-++-+-.++..+.+
T Consensus        34 NLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i~V~m--F--F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAITVAM--F--FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeec-cccccCCCCchhhhheehhe--e--eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            35566666655443333221 11112356666665443322  2  345666678888764443 344556789999999


Q ss_pred             HHHHhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCCCCCCcccCCC-ccccchhHHHHHHHHHHHHHHHHHH
Q 026352          105 AVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSLKGAPIHLGTN-SVHENWLKGSILTVASCILWSSFYI  183 (240)
Q Consensus       105 ~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~l~l~a~~~~a~~~v  183 (240)
                      +|++.++|-+.+|      ....++.-+|+++.+..+.++... .-+...++++ .....+..|..+...|-+.=|...+
T Consensus       109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgi  181 (330)
T KOG1583|consen  109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGI  181 (330)
T ss_pred             HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999      588988899998876553322211 0000111111 1223457899998899998898899


Q ss_pred             HHhhhhhcCC-chhHHHHHHHHHHHHHHHHHHHhccCC
Q 026352          184 MQAFTLKKYP-AKLSISAWMNCIGAAQSAVYTIIVQPK  220 (240)
Q Consensus       184 ~~k~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~  220 (240)
                      .++..-+++. ++-...++.=    .+++|.-++.++|
T Consensus       182 yqE~~Y~kyGKh~~EalFytH----~LsLP~Flf~~~d  215 (330)
T KOG1583|consen  182 YQETTYQKYGKHWKEALFYTH----FLSLPLFLFMGDD  215 (330)
T ss_pred             HHHHHHHHhcCChHHHHHHHH----HhccchHHHhcch
Confidence            9888777653 2344444443    3555655555554

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.32  E-value=2  Score=33.32  Aligned_cols=109  Identities=14%  Similarity=0.186  Sum_probs=59.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHH
Q 026352           24 NPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTF  102 (240)
Q Consensus        24 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~  102 (240)
                      +|+.-.+..+.++.+++..+.+.++++.......+.-++...-|++|. .+-..-.......+++....+ ..-.-++..
T Consensus        33 spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa-~~vt~s~~l~p~lGa~~t~~l~i~gQli~gl  111 (150)
T COG3238          33 SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGA-IFVTSSILLAPRLGAATTIALVIAGQLIMGL  111 (150)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhh-hhhhhhHHhccchhHHHHHHHHHHHHHHHHH
Confidence            599999999999999998888774333222211221223334466664 344444445555554444333 233334444


Q ss_pred             HHHHH-HhhccccccCCCCccchhhHHHHHHHHHH
Q 026352          103 IIAVV-FRLEIVDVRSPRGIAKILGTLASLVGVMV  136 (240)
Q Consensus       103 ll~~~-~~~e~~~~~~~~~~~~~~g~~i~~~G~~~  136 (240)
                      ++..+ ++++.   ++.++..|++|+++.++|+.+
T Consensus       112 liD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~  143 (150)
T COG3238         112 LIDHFGWFGVP---KRPLNLPRILGILLVLAGILL  143 (150)
T ss_pred             HHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHH
Confidence            44432 22221   122455668999999999433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.60  E-value=7  Score=33.98  Aligned_cols=121  Identities=14%  Similarity=0.151  Sum_probs=81.7

Q ss_pred             HHHHHHHHhhhC-CCChHHHHHHHHHHHHHHHHHHHHHHhcC-----CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026352           10 SVYFLTEDSFNQ-GLNPHIYVTYRHAAGSLMMFPFAYFLERK-----IRP-KLTLAVFLEIFLLSLLGVSLALNLYFASM   82 (240)
Q Consensus        10 ~~~i~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~-----~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~l   82 (240)
                      ...+..|...+. +.+-+.+.++-.+.+.+.+.....+.+..     ..+ ......+....+.++++. .-..+-++..
T Consensus       171 ~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf-~isy~s~~ct  249 (314)
T KOG1444|consen  171 AFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGF-GISYTSFLCT  249 (314)
T ss_pred             HHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            334455555543 56677788888888887776655443210     011 112233455666677765 5777788889


Q ss_pred             cccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352           83 KYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI  137 (240)
Q Consensus        83 ~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~  137 (240)
                      +++++...++.....=..+.+...++.+++.++..      ++|+.+++.|.++=
T Consensus       250 ~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n------~~gll~~~~ggv~Y  298 (314)
T KOG1444|consen  250 RVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLN------VIGLLVGFFGGVLY  298 (314)
T ss_pred             hhccccceeehhhhhhHHHHHHHHhcCCceechhh------hHHHHHHhhhhhHH
Confidence            99999988888866666666666677889999888      69999999998654

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=86.56  E-value=0.97  Score=37.94  Aligned_cols=78  Identities=13%  Similarity=0.154  Sum_probs=55.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeeccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHH
Q 026352           56 TLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVM  135 (240)
Q Consensus        56 ~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~  135 (240)
                      ++..|+. .+-|++= ...+.+++.+-+..+.+.+=.+..+.-+..++-+.++++||=+++++  ...+.|+++.++|.+
T Consensus       206 ~K~t~~n-ii~G~~W-a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm--~~v~iGiilivvgai  281 (288)
T COG4975         206 NKYTWLN-IIPGLIW-AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEM--VYVIIGIILIVVGAI  281 (288)
T ss_pred             HHHHHHH-HhhHHHH-HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhh--hhhhhhHHHHHHHhh
Confidence            3344444 4456554 36888888888888877777778888888899999999999999885  333456666666665


Q ss_pred             HH
Q 026352          136 VI  137 (240)
Q Consensus       136 ~~  137 (240)
                      ++
T Consensus       282 ~l  283 (288)
T COG4975         282 LL  283 (288)
T ss_pred             hh
Confidence            54

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=85.87  E-value=3.6  Score=29.87  Aligned_cols=115  Identities=17%  Similarity=0.147  Sum_probs=66.1

Q ss_pred             ChhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026352            1 MILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFA   80 (240)
Q Consensus         1 ~~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (240)
                      |+.+.++||.+..+.|.+... .+..-=.. |-.     +   ...++.|.. -++++.+..+    .++. ....+||+
T Consensus         8 lvaVgllWG~Tnplirrgs~g-~~~v~~~~-~k~-----~---~~lqe~~tl-~l~w~Y~iPF----llNq-cgSaly~~   71 (125)
T KOG4831|consen    8 LVAVGLLWGATNPLIRRGSLG-WDKVKSSS-RKI-----M---IALQEMKTL-FLNWEYLIPF----LLNQ-CGSALYYL   71 (125)
T ss_pred             HHHHHHHHccccHHHHHHHhh-HhhccCch-HHH-----H---HHHHHHHHH-HHhHHHHHHH----HHHH-hhHHHHHH
Confidence            467888999999988876532 33221110 000     0   001121110 1223333221    2333 57778899


Q ss_pred             hhcccCcceeeeecc-chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHH
Q 026352           81 SMKYVHPTFMTAVVN-TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVI  137 (240)
Q Consensus        81 ~l~~~~~~~a~ii~~-~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~  137 (240)
                      -+++++-+.+.-+.+ +.-.++++.+..+ +|+...++.     ++|..+.+.|+.+.
T Consensus        72 tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a-----~lGt~liv~Gi~Lc  123 (125)
T KOG4831|consen   72 TLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLA-----LLGTSLIVFGIWLC  123 (125)
T ss_pred             HHhcCCceeeeeecchhHHHHHHHHHHHh-cccccccee-----ehhhhHHhhhhhhe
Confidence            999999998887754 4556666666654 566554443     79998888888654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=85.60  E-value=12  Score=31.78  Aligned_cols=180  Identities=13%  Similarity=0.102  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHHHhhhCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026352            2 ILLQICVASVYFLTEDSFNQGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPKLTLAVFLEIFLLSLLGVSLALNLYFAS   81 (240)
Q Consensus         2 ~~~~~~wg~~~i~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   81 (240)
                      +++.+++|++++-.|.- +. -|++.+.++-...-.+.-+.....  +. .|+.    .....+-|.+= +..+.+-.-.
T Consensus         6 ~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~--~~-~p~f----~p~amlgG~lW-~~gN~~~vpi   75 (254)
T PF07857_consen    6 IVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLI--LG-FPPF----YPWAMLGGALW-ATGNILVVPI   75 (254)
T ss_pred             HHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHh--cC-CCcc----eeHHHhhhhhh-hcCceeehhH
Confidence            56789999999999963 44 688777766544444433333333  21 2222    12223333443 3466666677


Q ss_pred             hcccCcceeeeeccchhHHH-HHHHHH-HhhccccccCCCCccchhhHHHHHHHHHHHHHhcCCCCCCC---C-----CC
Q 026352           82 MKYVHPTFMTAVVNTIPCMT-FIIAVV-FRLEIVDVRSPRGIAKILGTLASLVGVMVIAFYKGPAVPSL---K-----GA  151 (240)
Q Consensus        82 l~~~~~~~a~ii~~~~P~~~-~ll~~~-~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~~~~~~~~~---~-----~~  151 (240)
                      ++..+-+.+-.+-.+.-+.+ -..+.+ +++++.+... ......+|+.++++|..+..+-+.+.....   .     .+
T Consensus        76 i~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~~  154 (254)
T PF07857_consen   76 IKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSIE  154 (254)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCccccccccccccc
Confidence            77777766665554433222 222221 2333322211 123446888888888876654332221100   0     00


Q ss_pred             Cc---cc-----CCCc------cccchhHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 026352          152 PI---HL-----GTNS------VHENWLKGSILTVASCILWSSFYIMQAFTLKKY  192 (240)
Q Consensus       152 ~~---~~-----~~~~------~~~~~~~G~~l~l~a~~~~a~~~v~~k~~~~~~  192 (240)
                      +.   ..     .+++      ...+...|..+++.+++.|+...+=.....++.
T Consensus       155 ~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  155 DVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             cccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence            00   00     0000      111357899999999999999988877765553

The region concerned is approximately 280 residues long.

>COG2510 Predicted membrane protein [Function unknown]

Probab=82.83  E-value=6.9  Score=29.58  Aligned_cols=51  Identities=8%  Similarity=-0.042  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHhccC
Q 026352          168 SILTVASCILWSSFYIMQAFTLKKYPAKLSISAWMNCIGAAQSAVYTIIVQP  219 (240)
Q Consensus       168 ~~l~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  219 (240)
                      .++++++++.|++..++.|-..++. ||..-+....+...+.+.......++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~   55 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN   55 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc
Confidence            5789999999999999999888887 57888888888888888887777754

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=81.26  E-value=4.5  Score=35.05  Aligned_cols=110  Identities=12%  Similarity=0.146  Sum_probs=81.7

Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcceeeeecc
Q 026352           21 QGLNPHIYVTYRHAAGSLMMFPFAYFLERKIRPK-----LTLAVFLEIFLLSLLGVSLALNLYFASMKYVHPTFMTAVVN   95 (240)
Q Consensus        21 ~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~a~ii~~   95 (240)
                      ..+++..+.++-.+...+.-........ ..++.     ..++-++.+++.+.++. +.|.+.|+-++.-++-.-++++.
T Consensus       198 ~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l~s~~ga-vGQ~FI~~TI~~FGslt~t~I~t  275 (327)
T KOG1581|consen  198 YKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILLYSTCGA-VGQLFIFYTIERFGSLTFTTIMT  275 (327)
T ss_pred             CCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHHHHHhhh-hhhheehhhHhhcccHHHHHHHH
Confidence            3588888888888888777655432221 11221     23445666788888885 68888888888777777777888


Q ss_pred             chhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHH
Q 026352           96 TIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIA  138 (240)
Q Consensus        96 ~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~  138 (240)
                      +==++...++.+.++.++++.||      .|+.+.+.|+.+=+
T Consensus       276 tRk~~si~lS~i~f~h~~s~~q~------~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  276 TRKMVSIMLSCIVFGHPLSSEQW------LGVLIVFGGIFLEI  312 (327)
T ss_pred             HHHHHHHHHHHHHhCCccchhhc------cCeeeehHHHHHHH
Confidence            88888999999999999999996      99999998886543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	240
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 4e-06
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 34/126 (26%)

Query: 12  YFLTEDSFNQGLNP-------HIYVTYRHAAGSLM-----MFPFAY----FLERKIRPKL 55
           Y + +   +  L P       + ++ + H           +F   +    FLE+KIR   
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSHIGH-HLKNIEHPERMTLFRMVFLDFRFLEQKIR-HD 510

Query: 56  TLAVFLEIFLLSLLGVSLALNLYFASMKYV---HPTFMTAVVNTIPCMTFIIAVVFRLEI 112
           + A      +L+ L     L  Y     Y+    P +   +VN I  + F    + ++E 
Sbjct: 511 STAWNASGSILNTLQQ---LKFY---KPYICDNDPKY-ERLVNAI--LDF----LPKIEE 557

Query: 113 VDVRSP 118
             + S 
Sbjct: 558 NLICSK 563

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	240
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.31
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.22

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.31  E-value=6.7e-07  Score=67.41  Aligned_cols=70  Identities=14%  Similarity=0.242  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHHh
Q 026352           65 LLSLLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAFY  140 (240)
Q Consensus        65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~~  140 (240)
                      +.+++...+++.++..++++.+++.+..+ .++.|++++++++++++|++++++      ++|+.+.++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            45666677899999999999999999888 899999999999999999999999      69999999999887643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.22  E-value=2e-06  Score=62.34  Aligned_cols=69  Identities=14%  Similarity=0.245  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCcceeeee-ccchhHHHHHHHHHHhhccccccCCCCccchhhHHHHHHHHHHHHH
Q 026352           65 LLSLLGVSLALNLYFASMKYVHPTFMTAV-VNTIPCMTFIIAVVFRLEIVDVRSPRGIAKILGTLASLVGVMVIAF  139 (240)
Q Consensus        65 ~~g~~~~~~~~~~~~~~l~~~~~~~a~ii-~~~~P~~~~ll~~~~~~e~~~~~~~~~~~~~~g~~i~~~G~~~~~~  139 (240)
                      ..+.++...++.++..++++.|.+.+..+ ..+.|+.+++++++++||+++.++      ++|+.+.++|++.+..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            45556666889999999999999999888 799999999999999999999999      5999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00