Citrus Sinensis ID: 026401

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcEEEEEEEccccccccccccccccccccccccccEEEccEEEEEEEHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccccccHHHHHHHHcccccEEHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHEEEcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccccccc
Coil and Loop (DISEMBL)
mignltpgFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLykgptimstasipaqslhwtpqstrsrWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIisapicfvgesnlsawrlkpdiELASIVYSAFFGLSFITVVHTFglrmkgpvytaIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGkandeagknkdsckipllqsp
Flexible Loop (DISEMBL)
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKandeagknkdsckipllqsp
Low Complexity Region (SEG)
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWViggllllisnllisVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSiaiaaiTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Disordered region (IsUnstruct)
****LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA*******************
Disordered Region (DISOPRED)
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMST*******************VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW****************P*****
Disordered Region (DISEMBL)
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Disordered Region (DISPRO)
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS**************SRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA*******************
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	239	2.2.26 [Sep-21-2011]
Q9FL08	368	WAT1-related protein At5g	yes	no	0.983	0.638	0.554	3e-69
F4KHA8	370	WAT1-related protein At5g	no	no	0.991	0.640	0.533	2e-64
F4JK59	347	WAT1-related protein At4g	no	no	0.945	0.651	0.527	1e-55
Q94JU2	367	WAT1-related protein At3g	no	no	0.983	0.640	0.436	2e-52
Q8VYZ7	360	WAT1-related protein At3g	no	no	0.979	0.65	0.431	4e-46
Q945L4	339	WAT1-related protein At5g	no	no	0.924	0.651	0.409	5e-46
Q56X95	355	WAT1-related protein At3g	no	no	0.979	0.659	0.442	1e-45
Q9LRS5	353	WAT1-related protein At3g	no	no	0.937	0.634	0.449	2e-45
F4IYZ0	358	WAT1-related protein At3g	no	no	0.979	0.653	0.422	1e-43
F4HZQ7	389	WAT1-related protein At1g	no	no	0.987	0.606	0.352	5e-36

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  261 bits (667), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 171/240 (71%), Gaps = 5/240 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS-- 59
           I NLTP FTF LA+IFRME + L S +T AKIIG ++S+SGA++VVLYKGP ++++AS  
Sbjct: 116 ISNLTPAFTFTLAVIFRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFT 175

Query: 60  --IPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
             +P  +LH    S  S W+IGGLLL     LISVWYI+QT+ M++YP E  V   Y LF
Sbjct: 176 TVLPTVTLHQQLTSIESSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLF 235

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+IS P+C   ESNL++W LKPDI LA+I+YS  F   F  + HT+GL +KGPVY ++F
Sbjct: 236 ATLISVPVCLFAESNLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLF 295

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 236
           +PLSIAIA     IFL +ALHLGSVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 296 RPLSIAIAVAMGAIFLGDALHLGSVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 355

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  245 bits (625), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 173/242 (71%), Gaps = 5/242 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI- 60
           I NLTP FTF LA+IFRME + L S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+ 
Sbjct: 117 ISNLTPAFTFTLAVIFRMEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLT 176

Query: 61  ---PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
              P  SL+    S  S W+IGGLLL    LL+SVWYI+QT+ M+LYP E  V  LY L 
Sbjct: 177 PPSPTISLYQHLTSFDSSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLC 236

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+ISAP+C   E +L+++ LKP + LAS++YS     SF +V+HT+GL +KGPVY ++F
Sbjct: 237 ATLISAPVCLFAEKDLNSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLF 296

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 236
           KPLSI IA     +FL +AL+LGSVIG +I  +GFYTV+WGKA +++ K    + + PLL
Sbjct: 297 KPLSIVIAVAMGVMFLGDALYLGSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLL 356

Query: 237 QS 238
            S
Sbjct: 357 PS 358

Arabidopsis thaliana (taxid: 3702)

>sp|F4JK59|WTR33_ARATH WAT1-related protein At4g15540 OS=Arabidopsis thaliana GN=At4g15540 PE=2 SV=1

 Score =  216 bits (550), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/235 (52%), Positives = 162/235 (68%), Gaps = 9/235 (3%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           I NLTP FTFILAI FRME + L S +T AKIIGT+VS+SGA+++VLYKGP ++  AS  
Sbjct: 113 ISNLTPAFTFILAIFFRMEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASF- 171

Query: 62  AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
                    S  S W+IGGLLL +  LL+SVW+I+QT  M++YP E  V   Y L AT+I
Sbjct: 172 --------TSFESSWIIGGLLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLI 223

Query: 122 SAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS 181
           S  +C + E +L++W+LKP   LAS++YS  F  S  +V+HT+GL +KGPVY ++FKPLS
Sbjct: 224 SGTVCLLVEKDLNSWQLKPGFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLS 283

Query: 182 IAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLL 236
           IAIA   + IFL + LHLGSVIG VI   GFYTV+WGKA +++ K     +  LL
Sbjct: 284 IAIAVAMAAIFLGDTLHLGSVIGSVILSFGFYTVIWGKAREDSTKTVSDSEQSLL 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  206 bits (523), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 153/245 (62%), Gaps = 10/245 (4%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           I NLTP FTF+LA++FRME+++    S+ AK++GT+VS+ GA +V LY GP +++  S P
Sbjct: 108 ISNLTPAFTFLLAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAK-SPP 166

Query: 62  AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
           + SL    QST   W++G   L +    + +WYI+QTQ M+ YPAEF V   Y +  +  
Sbjct: 167 SVSLR--SQSTNPNWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFW 224

Query: 122 SAPICFVGESN-LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL 180
           +A +    E N L AW++KP+I L SIV S  FG      +HT+ LR+KGP++ A+FKPL
Sbjct: 225 TALVTLFTEGNDLGAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPL 284

Query: 181 SIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA------NDEAGKNKDSCKIP 234
           SIAIA     IFL ++L++GS+IG  +  +GFYTV+WGKA       D+   N +     
Sbjct: 285 SIAIAVAMGVIFLRDSLYIGSLIGATVITIGFYTVMWGKAKEVALVEDDNKANHEEANEA 344

Query: 235 LLQSP 239
            L SP
Sbjct: 345 DLDSP 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYZ7|WTR20_ARATH WAT1-related protein At3g28070 OS=Arabidopsis thaliana GN=At3g28070 PE=2 SV=1

 Score =  184 bits (468), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 104/241 (43%), Positives = 156/241 (64%), Gaps = 7/241 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           I N+TP  TFILAIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P
Sbjct: 113 INNITPALTFILAIIFRMEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPP 172

Query: 62  AQSL-HWTP--QSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
             +   ++P   S+ S W+IGG LL +  + +SV +I+Q   M +YPA F V+ LY +  
Sbjct: 173 YVNFRQFSPPLSSSNSDWLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCV 232

Query: 119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           +I+++ I  V E +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIF
Sbjct: 233 SIVTSTIGLVVEKNNPSVWIIHFDITLITIVTMAIVT-SVYYVIHSWTVRHKGPLYLAIF 291

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK--NKDSCKIPL 235
           KPLSI IA +   IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +    +  K PL
Sbjct: 292 KPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSFSEKEKTPL 351

Query: 236 L 236
           L
Sbjct: 352 L 352

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  184 bits (466), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 155/244 (63%), Gaps = 23/244 (9%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           + N+ P FTFILA++FRMEN++L   S+ AK++GT++S+ GA++V LY GP +MS+    
Sbjct: 109 MSNVNPAFTFILAVVFRMENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLMSS---- 164

Query: 62  AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
                       S W+IGG LL +  +L+SV Y++   TM  YP+  VVTL++ +   ++
Sbjct: 165 -----------HSDWIIGGGLLALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVV 213

Query: 122 SAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL 180
            A +  + E  N  AW ++ DI L ++V +      +  V+HT+ +  KGPVY ++FKPL
Sbjct: 214 CAFVSLLAEKDNPKAWVIRFDITLITVVATGILNSGYY-VIHTWAVSHKGPVYLSMFKPL 272

Query: 181 SIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE------AGKNKDSCKIP 234
           SI IAA+++FIFL E+L+LGSV+GG++  +GFY VLWGKA ++      A ++  S   P
Sbjct: 273 SILIAAVSTFIFLGESLYLGSVMGGILISIGFYMVLWGKAKEDKVDIIGAIESSPSHNAP 332

Query: 235 LLQS 238
           LL +
Sbjct: 333 LLDN 336

Arabidopsis thaliana (taxid: 3702)

>sp|Q56X95|WTR23_ARATH WAT1-related protein At3g28130 OS=Arabidopsis thaliana GN=At3g28130 PE=2 SV=1

 Score =  183 bits (464), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 149/244 (61%), Gaps = 10/244 (4%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           I N+ P  TFILAIIFRME  +    S+ AK++GT+VS+ GA++VVLY GP + + +S P
Sbjct: 109 ISNINPAITFILAIIFRMEKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPP 168

Query: 62  AQSLHWTPQSTRS---RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
              L        S    W+IGG LL I + L+ V +I+Q   MKLYPA F V+  Y L A
Sbjct: 169 FPQLRQLLLPLSSSNSDWIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIA 228

Query: 119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           +I+++ I  V E +N S W +  DI L  IV    F   +  + H + +R KGPVY AIF
Sbjct: 229 SILTSLIGIVAEKNNPSIWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIF 287

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKD---SCKIP 234
           +PLSI IA I   IFL ++ +LGS++GG++  +GFYTV+WGKA +  GK +    S + P
Sbjct: 288 RPLSILIAVIMGAIFLGDSFYLGSLVGGILISLGFYTVMWGKAKE--GKTQFLSLSEETP 345

Query: 235 LLQS 238
           LL  
Sbjct: 346 LLDE 349

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LRS5|WTR22_ARATH WAT1-related protein At3g28100 OS=Arabidopsis thaliana GN=At3g28100 PE=2 SV=1

 Score =  182 bits (461), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/229 (44%), Positives = 153/229 (66%), Gaps = 5/229 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           I N+TP  TFILAIIFRME ++    S+ AK++GT++S+ GA++VVLY GP +   +S P
Sbjct: 110 ISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPP 169

Query: 62  A---QSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
               + L     S+ S W+IGG LL I ++ +SV +I+Q + M  YPA F V+ LY +  
Sbjct: 170 YINFRQLSPPLSSSNSDWLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSV 229

Query: 119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           +I+++ I  V E +N S W ++ DI L +IV  A    S   V+H++ +R KGP+Y AIF
Sbjct: 230 SIVTSMIGLVVEKNNPSVWIIRFDITLITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIF 288

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK 226
           KPLSI IA + S +FL+++L+LG +IGG++  +GFY V+WGKAN+E  +
Sbjct: 289 KPLSILIAVVMSAVFLNDSLYLGCLIGGLLITLGFYAVMWGKANEEKDQ 337

Arabidopsis thaliana (taxid: 3702)

>sp|F4IYZ0|WTR21_ARATH WAT1-related protein At3g28080 OS=Arabidopsis thaliana GN=At3g28080 PE=2 SV=1

 Score =  176 bits (447), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 152/246 (61%), Gaps = 12/246 (4%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           IGN+ P  TFILA+IFRME ++    S+ AK++GT++S+ GA +V+ Y GP +   +S P
Sbjct: 110 IGNIVPALTFILAVIFRMEKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPP 169

Query: 62  AQSLHWTPQSTRS---RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
             +         S    W+IGG +L I  + +SV +I+QT  M+ YP  F V++LY L  
Sbjct: 170 YLNFRQLSPPLSSSKSDWLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCI 229

Query: 119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           +I+++ I  V E +N S W +  DI L +IV +     S   V+H++ +R K P+Y AIF
Sbjct: 230 SIVTSMIGLVVEKNNPSIWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIF 288

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK-----DSCK 232
           KPLSI IA +   IFL+++L+LG +IGG++  +GFY V+WGKAN+E  KNK        K
Sbjct: 289 KPLSILIAVVMGTIFLNDSLYLGCLIGGILITLGFYVVMWGKANEE--KNKLLSFSGKEK 346

Query: 233 IPLLQS 238
            PLL S
Sbjct: 347 TPLLLS 352

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  150 bits (380), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 11/247 (4%)

Query: 4   NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTI--------- 54
           N+ P  TF+LAIIFR+E++    + + AK++GT+++VSGA+L+ LYKGP +         
Sbjct: 109 NVLPAITFVLAIIFRLESVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGG 168

Query: 55  -MSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLL 113
              +             +    W+ G L+LL      + ++I+Q+ T+K YPAE  +T L
Sbjct: 169 GGGSDGAGGSHGGAGAAAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTL 228

Query: 114 YCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVY 173
            CL  T+    +  V   +LSAW++  D  L +  YS          V    +R +GPV+
Sbjct: 229 ICLMGTLEGTAVSLVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVF 288

Query: 174 TAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKD-SCK 232
            A F PL + I A    + LSE++HLGSVIG +   VG YTV+WGK  D+   + D  CK
Sbjct: 289 VATFNPLCVVITAALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCK 348

Query: 233 IPLLQSP 239
              ++SP
Sbjct: 349 GLPIKSP 355

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
42568214	368	nodulin MtN21 /EamA-like transporter fam	0.983	0.638	0.554	2e-67
334188088	382	nodulin MtN21 /EamA-like transporter fam	0.983	0.615	0.554	3e-67
297801560	368	nodulin MtN21 family protein [Arabidopsi	0.979	0.635	0.541	2e-66
296087698	344	unnamed protein product [Vitis vinifera]	0.991	0.688	0.540	4e-65
225452524	359	PREDICTED: auxin-induced protein 5NG4 [V	0.991	0.660	0.540	5e-65
255552660	353	Auxin-induced protein 5NG4, putative [Ri	0.953	0.645	0.579	1e-64
356524437	427	PREDICTED: auxin-induced protein 5NG4-li	0.991	0.555	0.542	2e-64
297801562	367	hypothetical protein ARALYDRAFT_330483 [	0.991	0.645	0.534	9e-63
10177510	346	nodulin-like protein [Arabidopsis thalia	0.991	0.684	0.533	1e-62
15242612	370	nodulin MtN21 /EamA-like transporter fam	0.991	0.640	0.533	1e-62

>gi|42568214|ref|NP_198840.2| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|10177511|dbj|BAB10905.1| nodulin-like protein [Arabidopsis thaliana] gi|30725298|gb|AAP37671.1| At5g40240 [Arabidopsis thaliana] gi|110743630|dbj|BAE99652.1| hypothetical protein [Arabidopsis thaliana] gi|332007140|gb|AED94523.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 171/240 (71%), Gaps = 5/240 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS-- 59
           I NLTP FTF LA+IFRME + L S +T AKIIG ++S+SGA++VVLYKGP ++++AS  
Sbjct: 116 ISNLTPAFTFTLAVIFRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFT 175

Query: 60  --IPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
             +P  +LH    S  S W+IGGLLL     LISVWYI+QT+ M++YP E  V   Y LF
Sbjct: 176 TVLPTVTLHQQLTSIESSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLF 235

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+IS P+C   ESNL++W LKPDI LA+I+YS  F   F  + HT+GL +KGPVY ++F
Sbjct: 236 ATLISVPVCLFAESNLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLF 295

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 236
           +PLSIAIA     IFL +ALHLGSVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 296 RPLSIAIAVAMGAIFLGDALHLGSVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334188088|ref|NP_001190441.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007141|gb|AED94524.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 171/240 (71%), Gaps = 5/240 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTAS-- 59
           I NLTP FTF LA+IFRME + L S +T AKIIG ++S+SGA++VVLYKGP ++++AS  
Sbjct: 130 ISNLTPAFTFTLAVIFRMEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFT 189

Query: 60  --IPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
             +P  +LH    S  S W+IGGLLL     LISVWYI+QT+ M++YP E  V   Y LF
Sbjct: 190 TVLPTVTLHQQLTSIESSWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLF 249

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+IS P+C   ESNL++W LKPDI LA+I+YS  F   F  + HT+GL +KGPVY ++F
Sbjct: 250 ATLISVPVCLFAESNLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLF 309

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 236
           +PLSIAIA     IFL +ALHLGSVIG +I C+GFYTV+WGKA ++  K    S + PLL
Sbjct: 310 RPLSIAIAVAMGAIFLGDALHLGSVIGSMILCIGFYTVIWGKAREDTIKTVAGSEQSPLL 369

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801560|ref|XP_002868664.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297314500|gb|EFH44923.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 131/242 (54%), Positives = 168/242 (69%), Gaps = 8/242 (3%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI- 60
           I NLTP FTF LA+IFRME + L S +T AKIIG ++S+SGA++++LYKGP +++ AS  
Sbjct: 116 ISNLTPAFTFTLAVIFRMEQVRLRSSATQAKIIGAILSISGALVILLYKGPQVLAAASFT 175

Query: 61  ---PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
              P  SLH    S  S+W IGGLLL     LISVWYI+QT+ M++YP E  V   Y LF
Sbjct: 176 PLSPTISLHQHLASLESKWTIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLF 235

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+IS P+C   ESNL++W LKPDI LA+I+YS  F   F  + HT+GL MKGPVY ++F
Sbjct: 236 ATLISVPVCIFAESNLTSWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHMKGPVYISLF 295

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCKIPLLQ 237
           +PLSIAIA     IFL ++LHLGSVIG +I C+GFYTV+WGKA ++  K     +    Q
Sbjct: 296 RPLSIAIAVAMGAIFLGDSLHLGSVIGSMILCIGFYTVIWGKAREDTIKTVAGSE----Q 351

Query: 238 SP 239
           SP
Sbjct: 352 SP 353

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087698|emb|CBI34954.3| unnamed protein product [Vitis vinifera]

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/248 (54%), Positives = 175/248 (70%), Gaps = 11/248 (4%)

Query: 1   MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI 60
           +IGNLTP  TF+LAI FRME LAL SLS+WAKI GT+ S+SGA++VVLYKG  + ST+S 
Sbjct: 93  VIGNLTPALTFMLAIFFRMEKLALRSLSSWAKITGTIASISGALIVVLYKGLQLTSTSS- 151

Query: 61  PAQ--SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
           P Q  SLH    S + +WVIGGLLL+  +LL+S+WYI+Q Q M++YP E VV  L  L  
Sbjct: 152 PLQFISLHQPLNSQQMKWVIGGLLLVAEDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCL 211

Query: 119 TIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFK 178
           TIISAP+C + E NLS WR++ DI LA+IV+SAF+G +F  VV T+ +R+KGPVY A+F 
Sbjct: 212 TIISAPVCLIAEKNLSVWRVELDIALAAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFN 271

Query: 179 PLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN--------KDS 230
           PLSI IA     +FL + L+LGS+IG ++  +GFY V WGKA +E  ++          +
Sbjct: 272 PLSIVIATAMGVMFLGDTLYLGSIIGAIVISIGFYIVTWGKAKEETIEDFGVGSLESLSN 331

Query: 231 CKIPLLQS 238
            KIPLL S
Sbjct: 332 PKIPLLLS 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452524|ref|XP_002279776.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 134/248 (54%), Positives = 175/248 (70%), Gaps = 11/248 (4%)

Query: 1   MIGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI 60
           +IGNLTP  TF+LAI FRME LAL SLS+WAKI GT+ S+SGA++VVLYKG  + ST+S 
Sbjct: 108 VIGNLTPALTFMLAIFFRMEKLALRSLSSWAKITGTIASISGALIVVLYKGLQLTSTSS- 166

Query: 61  PAQ--SLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
           P Q  SLH    S + +WVIGGLLL+  +LL+S+WYI+Q Q M++YP E VV  L  L  
Sbjct: 167 PLQFISLHQPLNSQQMKWVIGGLLLVAEDLLVSIWYIVQAQVMEVYPEELVVVFLSNLCL 226

Query: 119 TIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFK 178
           TIISAP+C + E NLS WR++ DI LA+IV+SAF+G +F  VV T+ +R+KGPVY A+F 
Sbjct: 227 TIISAPVCLIAEKNLSVWRVELDIALAAIVFSAFWGSAFGMVVPTWVVRLKGPVYVAMFN 286

Query: 179 PLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN--------KDS 230
           PLSI IA     +FL + L+LGS+IG ++  +GFY V WGKA +E  ++          +
Sbjct: 287 PLSIVIATAMGVMFLGDTLYLGSIIGAIVISIGFYIVTWGKAKEETIEDFGVGSLESLSN 346

Query: 231 CKIPLLQS 238
            KIPLL S
Sbjct: 347 PKIPLLLS 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552660|ref|XP_002517373.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223543384|gb|EEF44915.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/245 (57%), Positives = 172/245 (70%), Gaps = 17/245 (6%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           + NLT  FTFILAI+ RME L   S  T AKIIGT+VS+SGA++VVLYKGP I  T+ I 
Sbjct: 112 LSNLTLPFTFILAIVLRMEKLDFKSSRTQAKIIGTVVSISGALMVVLYKGPVIGLTSLI- 170

Query: 62  AQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
                   +ST+S WVIGGLLL I   L SVWYIIQTQ +++YPAE  VT L  L++TII
Sbjct: 171 --------RSTKSDWVIGGLLLSIQYSLYSVWYIIQTQIIQIYPAEIQVTFLVNLYSTII 222

Query: 122 SAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS 181
           +AP+CF+ E NLSAWRL+PDIELA++ YS  FG SFIT+VH +GLR KGPVY   FKPLS
Sbjct: 223 AAPVCFLAEPNLSAWRLRPDIELAALAYSGLFGASFITIVHLWGLRQKGPVYVTSFKPLS 282

Query: 182 IAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS--------CKI 233
           IAIAA    +FL +ALHLGSVIG +   VGFY ++WGK  +E  +  DS         + 
Sbjct: 283 IAIAAAMGALFLGDALHLGSVIGAIFISVGFYALIWGKLQEEKIEECDSDTSNSPINSRS 342

Query: 234 PLLQS 238
           PLLQS
Sbjct: 343 PLLQS 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524437|ref|XP_003530835.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/247 (54%), Positives = 171/247 (69%), Gaps = 10/247 (4%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           + NL P FTFILAIIFRME +AL S ST AKI+G+LVS+SGA++VVLYKGP I+ST+S  
Sbjct: 170 LSNLIPAFTFILAIIFRMEKVALRSPSTMAKILGSLVSISGALIVVLYKGPIILSTSSPQ 229

Query: 62  AQSLHWTPQSTRSR--WVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFAT 119
                 +P  + S+  WV+GG LL I  LL+ +WYI+QT  MK YPAEF+V  LY L  T
Sbjct: 230 PSPTTDSPMDSTSQTNWVLGGSLLAIEFLLVPIWYIVQTNIMKQYPAEFIVVFLYNLTGT 289

Query: 120 IISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKP 179
           +IS PIC + E+NLS+W++  DI L +I+YS FF     ++VHT+GL +KGPVY +IFKP
Sbjct: 290 LISTPICLLLEANLSSWKINCDITLIAIIYSGFFSTGLSSLVHTWGLHLKGPVYISIFKP 349

Query: 180 LSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKD--------SC 231
           LSI +AA  S IFL +AL+ G+V+G VI   GFY VLWGKA +E     D        + 
Sbjct: 350 LSIVVAAALSVIFLGDALYFGTVVGAVILSFGFYAVLWGKAKEEELTVVDFDDIRPPSNT 409

Query: 232 KIPLLQS 238
           K PLLQS
Sbjct: 410 KSPLLQS 416

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801562|ref|XP_002868665.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata] gi|297314501|gb|EFH44924.1| hypothetical protein ARALYDRAFT_330483 [Arabidopsis lyrata subsp. lyrata]

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 130/243 (53%), Positives = 171/243 (70%), Gaps = 6/243 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI- 60
           I NLTP FTF LA+IFRME + L S +T AKIIGT+VS+SGA++VVLYKGP +++ A++ 
Sbjct: 117 ISNLTPAFTFTLAVIFRMEQVVLRSSATQAKIIGTIVSISGALVVVLYKGPKVLTDATLT 176

Query: 61  ---PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
              P  SL+    S  S W+IGGLLL    LL+SVWYI+QT+ M+LYP E  V  LY L 
Sbjct: 177 PPSPTISLYQHLTSFDSSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLC 236

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+ISAP+C   E +L+++ LKP + LAS++YS     SF +V+HT+GL +KGPVY ++F
Sbjct: 237 ATLISAPVCLFAEKDLTSFVLKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLF 296

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN--KDSCKIPL 235
           KPLSI IA     IFL +AL+L SVIG VI  +GFYTV+WGKA +++ K       + PL
Sbjct: 297 KPLSIVIAVAMGVIFLGDALYLRSVIGSVILSLGFYTVIWGKAREDSTKTVADTEQQSPL 356

Query: 236 LQS 238
           L S
Sbjct: 357 LPS 359

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10177510|dbj|BAB10904.1| nodulin-like protein [Arabidopsis thaliana]

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 173/242 (71%), Gaps = 5/242 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI- 60
           I NLTP FTF LA+IFRME + L S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+ 
Sbjct: 93  ISNLTPAFTFTLAVIFRMEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLT 152

Query: 61  ---PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
              P  SL+    S  S W+IGGLLL    LL+SVWYI+QT+ M+LYP E  V  LY L 
Sbjct: 153 PPSPTISLYQHLTSFDSSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLC 212

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+ISAP+C   E +L+++ LKP + LAS++YS     SF +V+HT+GL +KGPVY ++F
Sbjct: 213 ATLISAPVCLFAEKDLNSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLF 272

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 236
           KPLSI IA     +FL +AL+LGSVIG +I  +GFYTV+WGKA +++ K    + + PLL
Sbjct: 273 KPLSIVIAVAMGVMFLGDALYLGSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLL 332

Query: 237 QS 238
            S
Sbjct: 333 PS 334

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242612|ref|NP_198839.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|332007139|gb|AED94522.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/242 (53%), Positives = 173/242 (71%), Gaps = 5/242 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI- 60
           I NLTP FTF LA+IFRME + L S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+ 
Sbjct: 117 ISNLTPAFTFTLAVIFRMEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLT 176

Query: 61  ---PAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLF 117
              P  SL+    S  S W+IGGLLL    LL+SVWYI+QT+ M+LYP E  V  LY L 
Sbjct: 177 PPSPTISLYQHLTSFDSSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLC 236

Query: 118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           AT+ISAP+C   E +L+++ LKP + LAS++YS     SF +V+HT+GL +KGPVY ++F
Sbjct: 237 ATLISAPVCLFAEKDLNSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLF 296

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLL 236
           KPLSI IA     +FL +AL+LGSVIG +I  +GFYTV+WGKA +++ K    + + PLL
Sbjct: 297 KPLSIVIAVAMGVMFLGDALYLGSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLL 356

Query: 237 QS 238
            S
Sbjct: 357 PS 358

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.991	0.640	0.483	1.1e-55
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.953	0.657	0.478	1.5e-53
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.920	0.599	0.433	1.2e-47
TAIR|locus:2091368	355	UMAMIT44 "AT3G28130" [Arabidop	0.937	0.630	0.411	1.2e-40
TAIR|locus:2091338	353	UMAMIT45 "AT3G28100" [Arabidop	0.924	0.626	0.411	2e-40
TAIR|locus:2091383	360	UMAMIT46 "AT3G28070" [Arabidop	0.979	0.65	0.394	6.8e-40
TAIR|locus:2091393	358	UMAMIT47 "AT3G28080" [Arabidop	0.937	0.625	0.398	1.8e-39
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.861	0.607	0.381	2.6e-38
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.916	0.591	0.333	4.1e-33
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.983	0.604	0.342	6.7e-33

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
 Identities = 117/242 (48%), Positives = 159/242 (65%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASI- 60
             I NLTP FTF LA+IFRME + L S +T AKIIGT+VS+SGA++V+LYKGP +++ AS+ 
Sbjct:   117 ISNLTPAFTFTLAVIFRMEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLT 176

Query:    61 ---PAQSLHWTPQSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLF 117
                P  SL+    S  S W+              VWYI+QT+ M+LYP E  V  LY L 
Sbjct:   177 PPSPTISLYQHLTSFDSSWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLC 236

Query:   118 ATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
             AT+ISAP+C   E +L+++ LKP + LAS++YS     SF +V+HT+GL +KGPVY ++F
Sbjct:   237 ATLISAPVCLFAEKDLNSFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLF 296

Query:   178 KPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDSCK-IPLL 236
             KPLS         +FL +AL+LGSVIG +I  +GFYTV+WGKA +++ K     +  PLL
Sbjct:   297 KPLSIVIAVAMGVMFLGDALYLGSVIGSLILSLGFYTVIWGKAREDSIKTVAGTEQSPLL 356

Query:   237 QS 238
              S
Sbjct:   357 PS 358

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 114/238 (47%), Positives = 150/238 (63%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             I NLTP FTFILAI FRME + L S +T AKIIGT+VS+SGA+++VLYKGP ++  AS  
Sbjct:   113 ISNLTPAFTFILAIFFRMEQVMLRSSATQAKIIGTIVSISGALVIVLYKGPKLLVAASFT 172

Query:    62 AQSLHWTPQSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
                      S  S W+              VW+I+QT  M++YP E  V   Y L AT+I
Sbjct:   173 ---------SFESSWIIGGLLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATLI 223

Query:   122 SAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS 181
             S  +C + E +L++W+LKP   LAS++YS  F  S  +V+HT+GL +KGPVY ++FKPLS
Sbjct:   224 SGTVCLLVEKDLNSWQLKPGFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPLS 283

Query:   182 XXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN-KDSCKIPLLQS 238
                    + IFL + LHLGSVIG VI   GFYTV+WGKA +++ K   DS +  LL S
Sbjct:   284 IAIAVAMAAIFLGDTLHLGSVIGSVILSFGFYTVIWGKAREDSTKTVSDSEQSLLLPS 341

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 97/224 (43%), Positives = 139/224 (62%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             I NLTP FTF+LA++FRME+++    S+ AK++GT+VS+ GA +V LY GP +++  S P
Sbjct:   108 ISNLTPAFTFLLAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAK-SPP 166

Query:    62 AQSLHWTPQSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
             + SL    QST   W+              +WYI+QTQ M+ YPAEF V   Y +  +  
Sbjct:   167 SVSLR--SQSTNPNWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFW 224

Query:   122 SAPICFVGESN-LSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL 180
             +A +    E N L AW++KP+I L SIV S  FG      +HT+ LR+KGP++ A+FKPL
Sbjct:   225 TALVTLFTEGNDLGAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPL 284

Query:   181 SXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA 224
             S         IFL ++L++GS+IG  +  +GFYTV+WGKA + A
Sbjct:   285 SIAIAVAMGVIFLRDSLYIGSLIGATVITIGFYTVMWGKAKEVA 328

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091368 UMAMIT44 "AT3G28130" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 95/231 (41%), Positives = 134/231 (58%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             I N+ P  TFILAIIFRME  +    S+ AK++GT+VS+ GA++VVLY GP + + +S P
Sbjct:   109 ISNINPAITFILAIIFRMEKASFKEKSSVAKMVGTIVSLVGALVVVLYHGPRVFTPSSPP 168

Query:    62 AQSLHWT--P-QSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
                L     P  S+ S W+              V +I+Q   MKLYPA F V+  Y L A
Sbjct:   169 FPQLRQLLLPLSSSNSDWIIGGCLLAIKDTLVPVAFILQAHIMKLYPAPFTVSFFYFLIA 228

Query:   119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
             +I+++ I  V E +N S W +  DI L  IV    F   +  + H + +R KGPVY AIF
Sbjct:   229 SILTSLIGIVAEKNNPSIWIIHFDITLVCIVVGGIFNPGYYAI-HLWAVRNKGPVYLAIF 287

Query:   178 KPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK 228
             +PLS         IFL ++ +LGS++GG++  +GFYTV+WGKA +  GK +
Sbjct:   288 RPLSILIAVIMGAIFLGDSFYLGSLVGGILISLGFYTVMWGKAKE--GKTQ 336

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091338 UMAMIT45 "AT3G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 93/226 (41%), Positives = 139/226 (61%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             I N+TP  TFILAIIFRME ++    S+ AK++GT++S+ GA++VVLY GP +   +S P
Sbjct:   110 ISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVVLYHGPRVFVASSPP 169

Query:    62 AQSLHW-TP--QSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
               +    +P   S+ S W+              V +I+Q + M  YPA F V+ LY +  
Sbjct:   170 YINFRQLSPPLSSSNSDWLIGGALLTIRDIFVSVSFILQAKIMSTYPAAFTVSFLYIVSV 229

Query:   119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
             +I+++ I  V E +N S W ++ DI L +IV  A    S   V+H++ +R KGP+Y AIF
Sbjct:   230 SIVTSMIGLVVEKNNPSVWIIRFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIF 288

Query:   178 KPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 223
             KPLS       S +FL+++L+LG +IGG++  +GFY V+WGKAN+E
Sbjct:   289 KPLSILIAVVMSAVFLNDSLYLGCLIGGLLITLGFYAVMWGKANEE 334

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091383 UMAMIT46 "AT3G28070" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 95/241 (39%), Positives = 143/241 (59%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             I N+TP  TFILAIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P
Sbjct:   113 INNITPALTFILAIIFRMEKVSFKERSSLAKLMGTILSLIGALVVIFYHGPRVFLASSPP 172

Query:    62 AQSLH-WTP--QSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
               +   ++P   S+ S W+              V +I+Q   M +YPA F V+ LY +  
Sbjct:   173 YVNFRQFSPPLSSSNSDWLIGGALLTMQGIFVSVSFILQAHIMSVYPAAFRVSFLYTVCV 232

Query:   119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
             +I+++ I  V E +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIF
Sbjct:   233 SIVTSTIGLVVEKNNPSVWIIHFDITLITIVTMAIV-TSVYYVIHSWTVRHKGPLYLAIF 291

Query:   178 KPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK--DSCKIPL 235
             KPLS         IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +    +  K PL
Sbjct:   292 KPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQLSFSEKEKTPL 351

Query:   236 L 236
             L
Sbjct:   352 L 352

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091393 UMAMIT47 "AT3G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 92/231 (39%), Positives = 139/231 (60%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             IGN+ P  TFILA+IFRME ++    S+ AK++GT++S+ GA +V+ Y GP +   +S P
Sbjct:   110 IGNIVPALTFILAVIFRMEKVSFKERSSVAKVMGTILSLIGAFVVIFYHGPRVFVASSPP 169

Query:    62 AQSLHW-TP--QSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
               +    +P   S++S W+              V +I+QT  M+ YP  F V++LY L  
Sbjct:   170 YLNFRQLSPPLSSSKSDWLIGGAILTIQGIFVSVSFILQTHIMREYPEAFTVSILYILCI 229

Query:   119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
             +I+++ I  V E +N S W +  DI L +IV +     S   V+H++ +R K P+Y AIF
Sbjct:   230 SIVTSMIGLVVEKNNPSIWIIHFDITLFTIVTTGII-TSVYYVIHSWAIRHKRPLYLAIF 288

Query:   178 KPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNK 228
             KPLS         IFL+++L+LG +IGG++  +GFY V+WGKAN+E  KNK
Sbjct:   289 KPLSILIAVVMGTIFLNDSLYLGCLIGGILITLGFYVVMWGKANEE--KNK 337

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 85/223 (38%), Positives = 133/223 (59%)

Query:     2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
             + N+ P FTFILA++FRMEN++L   S+ AK++GT++S+ GA++V LY GP +MS+    
Sbjct:   109 MSNVNPAFTFILAVVFRMENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLMSS---- 164

Query:    62 AQSLHWTPQSTRSRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
                 H       S W+              V Y++   TM  YP+  VVTL++ +   ++
Sbjct:   165 ----H-------SDWIIGGGLLALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVV 213

Query:   122 SAPICFVGES-NLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPL 180
              A +  + E  N  AW ++ DI L ++V +      +  V+HT+ +  KGPVY ++FKPL
Sbjct:   214 CAFVSLLAEKDNPKAWVIRFDITLITVVATGILNSGYY-VIHTWAVSHKGPVYLSMFKPL 272

Query:   181 SXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 223
             S      ++FIFL E+L+LGSV+GG++  +GFY VLWGKA ++
Sbjct:   273 SILIAAVSTFIFLGESLYLGSVMGGILISIGFYMVLWGKAKED 315

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 74/222 (33%), Positives = 116/222 (52%)

Query:     4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQ 63
             N  P  TFILA+IFR+E +    + + AK++GT+++V GAM++ LYKGP I         
Sbjct:   109 NALPAVTFILALIFRLETVNFRKVHSVAKVVGTVITVGGAMIMTLYKGPAI-EIVKAAHN 167

Query:    64 SLHWTPQSTRS--RWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLLYCLFATII 121
             S H    ST +   WV               ++I+Q+ T+K+YPAE  +  L C   TI+
Sbjct:   168 SFHGGSSSTPTGQHWVLGTIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTIL 227

Query:   122 SAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLS 181
             +A    +   + SAW++  D    + VYS          + +  ++ +GPV+T  F P+ 
Sbjct:   228 NAIASLIMVRDPSAWKIGMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMC 287

Query:   182 XXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE 223
                      + L+E +HLGS+IG V   +G Y+V+WGK+ DE
Sbjct:   288 MIITAFLGALVLAEKIHLGSIIGAVFIVLGLYSVVWGKSKDE 329

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 85/248 (34%), Positives = 127/248 (51%)

Query:     4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM-------- 55
             N+ P  TF+LAIIFR+E++    + + AK++GT+++VSGA+L+ LYKGP +         
Sbjct:   109 NVLPAITFVLAIIFRLESVNFKKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGG 168

Query:    56 STASIPAQSLHWTPQSTR--SRWVXXXXXXXXXXXXXXVWYIIQTQTMKLYPAEFVVTLL 113
                S  A   H    +      W+               ++I+Q+ T+K YPAE  +T L
Sbjct:   169 GGGSDGAGGSHGGAGAAAMDKHWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTL 228

Query:   114 YCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVY 173
              CL  T+    +  V   +LSAW++  D  L +  YS          V    +R +GPV+
Sbjct:   229 ICLMGTLEGTAVSLVTVRDLSAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVF 288

Query:   174 TAIFKPLSXXXXXXTSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKNKDS-CK 232
              A F PL          + LSE++HLGSVIG +   VG YTV+WGK  D+   + D  CK
Sbjct:   289 VATFNPLCVVITAALGVVVLSESIHLGSVIGTLFIIVGLYTVVWGKGKDKRMTDDDEDCK 348

Query:   233 -IPLLQSP 239
              +P+ +SP
Sbjct:   349 GLPI-KSP 355

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FL08	WTR42_ARATH	No assigned EC number	0.5541	0.9832	0.6385	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	239
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	8e-55

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  178 bits (454), Expect = 8e-55
 Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 5/229 (2%)

Query: 2   IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIP 61
           I N+TP  TFILAIIFRME ++    S+ AK++GT++S+ GA++V+ Y GP +   +S P
Sbjct: 110 ISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169

Query: 62  AQSLHWTP---QSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFA 118
             +         S+ S W+IGG LL I  + +SV +I+Q   M  YPA F V+ LY +  
Sbjct: 170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCV 229

Query: 119 TIISAPICFVGE-SNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIF 177
           +I+++ I  V E +N S W +  DI L +IV  A    S   V+H++ +R KGP+Y AIF
Sbjct: 230 SIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIF 288

Query: 178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK 226
           KPLSI IA +   IFL+++L+LG +IGG++  +GFY V+WGKAN+E  +
Sbjct: 289 KPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQ 337

Length = 358

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	239
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
PRK11689	295	aromatic amino acid exporter; Provisional	99.92
PRK11272	292	putative DMT superfamily transporter inner membran	99.92
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.91
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.9
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.88
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.88
PRK15430	296	putative chloramphenical resistance permease RarD;	99.87
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.86
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.84
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.8
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.74
KOG2765	416	consensus Predicted membrane protein [Function unk	99.72
COG2510	140	Predicted membrane protein [Function unknown]	99.68
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.68
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.62
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.61
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.59
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.59
COG2962	293	RarD Predicted permeases [General function predict	99.56
KOG2766	336	consensus Predicted membrane protein [Function unk	99.49
KOG1580	337	consensus UDP-galactose transporter related protei	99.46
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.27
PRK15430	296	putative chloramphenical resistance permease RarD;	99.25
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.24
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.17
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	99.1
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.1
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.94
PRK11272	292	putative DMT superfamily transporter inner membran	98.94
KOG1581	327	consensus UDP-galactose transporter related protei	98.93
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.89
PLN00411	358	nodulin MtN21 family protein; Provisional	98.89
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.88
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.87
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.82
PRK11689	295	aromatic amino acid exporter; Provisional	98.77
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.71
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.7
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.64
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.64
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.64
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.62
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.6
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.53
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.49
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.48
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.44
COG2962	293	RarD Predicted permeases [General function predict	98.34
KOG1582	367	consensus UDP-galactose transporter related protei	98.28
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.25
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.23
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.22
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.14
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.13
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.01
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.99
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.95
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.79
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.75
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.59
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.57
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.45
PRK13499	345	rhamnose-proton symporter; Provisional	97.41
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.37
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.34
PRK13499	345	rhamnose-proton symporter; Provisional	97.34
PRK11431	105	multidrug efflux system protein; Provisional	97.34
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.34
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.29
COG2076	106	EmrE Membrane transporters of cations and cationic	97.23
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	96.89
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.86
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.83
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.62
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.47
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	95.79
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.64
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.57
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.35
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.68
KOG2765	416	consensus Predicted membrane protein [Function unk	94.21
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.64
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	92.92
COG2076	106	EmrE Membrane transporters of cations and cationic	92.79
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	92.73
PRK09541	110	emrE multidrug efflux protein; Reviewed	92.64
PRK10650	109	multidrug efflux system protein MdtI; Provisional	92.34
PRK11431	105	multidrug efflux system protein; Provisional	92.08
KOG1580	337	consensus UDP-galactose transporter related protei	91.34
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.23
PRK02237	109	hypothetical protein; Provisional	90.11
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	89.56
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	87.85
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	87.14
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	86.92
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	86.63
KOG4831	125	consensus Unnamed protein [Function unknown]	84.58
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	83.28
KOG1581	327	consensus UDP-galactose transporter related protei	83.02
KOG3912	372	consensus Predicted integral membrane protein [Gen	81.73
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	81.2

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=1.8e-29  Score=221.50  Aligned_cols=219  Identities=43%  Similarity=0.762  Sum_probs=167.4

Q ss_pred             CCcchHHHHHHHHHHh------hhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCC-CCCCc-cCCC-CCCCC
Q 026401            2 IGNLTPGFTFILAIIF------RMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTA-SIPAQ-SLHW-TPQST   72 (239)
Q Consensus         2 i~~~~P~~~~~la~~~------~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~-~~~~~-~~~~-~~~~~   72 (239)
                      +.+++|++++++++++      +|||++++      +++|++++++|+.+++.++++.....+ +...+ ..+. .....
T Consensus       110 l~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  183 (358)
T PLN00411        110 ISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSS  183 (358)
T ss_pred             HHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCC
Confidence            5689999999999999      58888888      999999999999998854443211000 00000 0000 01112


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCC-CcccccCCchhHHHHHHHH
Q 026401           73 RSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIELASIVYSA  151 (239)
Q Consensus        73 ~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g  151 (239)
                      +.++..|+++++.++++|+.|++++|+..+++|+....+++++.++++...+.....++. ...|........+.++|.+
T Consensus       184 ~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~  263 (358)
T PLN00411        184 NSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMA  263 (358)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHH
Confidence            234567999999999999999999999999997566778888888888877776664432 2233222222345677888


Q ss_pred             HHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccccccC
Q 026401          152 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGKN  227 (239)
Q Consensus       152 i~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~~~~  227 (239)
                      ++ +.++|.+|++++++.||++++++.+++|++++++|++++||++++.+++|+++|+.|+++..++|+||.++++
T Consensus       264 i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~~~~  338 (358)
T PLN00411        264 II-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEKDQL  338 (358)
T ss_pred             HH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhhhcc
Confidence            75 5689999999999999999999999999999999999999999999999999999999999988777655443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=8.8e-26  Score=194.49  Aligned_cols=194  Identities=15%  Similarity=0.136  Sum_probs=154.5

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.+++|+++.+++++++|||++++      +++|++++++|+.++..  ++. +                .......|++
T Consensus        92 l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~--~~~-~----------------~~~~~~~G~~  146 (299)
T PRK11453         92 VLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE--DSL-N----------------GQHVAMLGFM  146 (299)
T ss_pred             HHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc--ccC-C----------------CcchhHHHHH
Confidence            457899999999999999999999      99999999999998872  110 0                1111236999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCc--hHHHHHHHHHHHHHHHHHHHHhccCCC---cccccCCchhHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPA--EFVVTLLYCLFATIISAPICFVGESNL---SAWRLKPDIELASIVYSAFFGLS  156 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gi~~~~  156 (239)
                      +++.++++|+.|.+++|+..++.++  ......+.+..+.+.........+.+.   ..+...+...|..++|++++++.
T Consensus       147 l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~  226 (299)
T PRK11453        147 LTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATI  226 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999998765532  234445555665555444444333221   11222234578899999999999


Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      ++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|+++..+.++
T Consensus       227 ~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        227 VGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999999999999999999999998877665

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.92  E-value=6.4e-25  Score=188.79  Aligned_cols=193  Identities=12%  Similarity=0.131  Sum_probs=146.4

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHH
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLL   82 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~   82 (239)
                      .+++|+++.+++++++|||++++      +++|++++++|+.++.. .++..+..      +.    ..+..+...|+++
T Consensus        98 ~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~~~------~~----~~~~~~~~~G~~~  160 (295)
T PRK11689         98 NYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLSLA------EL----INNIASNPLSYGL  160 (295)
T ss_pred             HHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccchhh------hh----hhccccChHHHHH
Confidence            46789999999999999999999      99999999999999882 11100000      00    0011122369999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHH
Q 026401           83 LLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVH  162 (239)
Q Consensus        83 ~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~  162 (239)
                      ++.++++||.|+++.||..+++ ++.....   ..+++.+.+.....+.....   .+...|..+++.++ ++.++|.+|
T Consensus       161 ~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~~~~~~---~~~~~~~~l~~~~~-~t~~~~~l~  232 (295)
T PRK11689        161 AFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSPQPAMV---FSLPAIIKLLLAAA-AMGFGYAAW  232 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhcCcccc---CCHHHHHHHHHHHH-HHHHHHHHH
Confidence            9999999999999999988777 4665422   23334444333332211111   12346777788885 789999999


Q ss_pred             HHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          163 TFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       163 ~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      ++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++....+|
T Consensus       233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            9999999999999999999999999999999999999999999999999988765443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.92  E-value=3e-24  Score=184.35  Aligned_cols=188  Identities=15%  Similarity=0.119  Sum_probs=155.6

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.++.|+++.+++++ +|||++++      +++|++++++|+.++.. ++ .                  .+ ....|++
T Consensus       102 l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~-~------------------~~-~~~~G~l  153 (292)
T PRK11272        102 VVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GG-N------------------LS-GNPWGAI  153 (292)
T ss_pred             HHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Cc-c------------------cc-cchHHHH
Confidence            457899999999986 69999999      99999999999988762 11 0                  01 1237999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVV  161 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l  161 (239)
                      +.+.++++||.|.+..||..++.  +...+.+++..+++.+.+.....+.+...  ..+...|..+++.+++++.++|.+
T Consensus       154 ~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~l~i~~s~~~~~l  229 (292)
T PRK11272        154 LILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFLALGYLAVFGSIIAISA  229 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999976543  45667788888888887777653322111  123357889999999999999999


Q ss_pred             HHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          162 HTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       162 ~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      |++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+++++
T Consensus       230 ~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        230 YMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999988765443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.91  E-value=3e-23  Score=174.79  Aligned_cols=180  Identities=18%  Similarity=0.261  Sum_probs=152.0

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.++.|+++++++++++|||++++      ++.|++++++|+.++.. ++ .                   ......|++
T Consensus        79 i~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-~-------------------~~~~~~G~~  131 (260)
T TIGR00950        79 LLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-N-------------------LSINPAGLL  131 (260)
T ss_pred             HHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-c-------------------ccccHHHHH
Confidence            457899999999999999999999      99999999999999872 11 0                   112347999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      +++.++++|+.+.+..|+..++.+ ++.....+++..+++.+.+..+..+... .+   +...|..+++.+++++.++|.
T Consensus       132 ~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~  207 (260)
T TIGR00950       132 LGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGTALAYF  207 (260)
T ss_pred             HHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887763 1345555778888888888876543221 11   234677899999999999999


Q ss_pred             HHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhh
Q 026401          161 VHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGF  212 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi  212 (239)
                      +|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++++.|+
T Consensus       208 ~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       208 LWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999999886

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.90  E-value=1.3e-23  Score=181.24  Aligned_cols=193  Identities=17%  Similarity=0.180  Sum_probs=149.2

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.+++|+++++++++++|||++++      ++.|++++++|+.+..  .++                   .+ ....|++
T Consensus        97 i~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~--~~~-------------------~~-~~~~G~~  148 (302)
T TIGR00817        97 IKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS--DTE-------------------LS-FNWAGFL  148 (302)
T ss_pred             HHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc--CCc-------------------cc-ccHHHHH
Confidence            346899999999999999999999      9999999999997654  110                   11 1246999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhh--hcCchHHHHHHHHHHHHHHHHHHHHhccCCC---ccccc-----CCchhHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMK--LYPAEFVVTLLYCLFATIISAPICFVGESNL---SAWRL-----KPDIELASIVYSA  151 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~l~~~g  151 (239)
                      ++++++++|++|++..||..+  ++ |+...+.+++..+++.++|.....+...   .++..     .....+...++.+
T Consensus       149 ~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (302)
T TIGR00817       149 SAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA  227 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence            999999999999999999887  77 6999999999999999999887654321   01100     0000111122333


Q ss_pred             HHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccc
Q 026401          152 FFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  223 (239)
Q Consensus       152 i~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~  223 (239)
                      ..+....+.++++++++.+|++++++.+++|++++++|++++||++++.+++|+++++.|++++.+.|++++
T Consensus       228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            222222334566899999999999999999999999999999999999999999999999999887655433

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.88  E-value=7.7e-22  Score=169.53  Aligned_cols=184  Identities=14%  Similarity=0.091  Sum_probs=142.4

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHH
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLL   82 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~   82 (239)
                      ..+.|+++.+++    +||++        +..++.++++|+.+++. .+++                  .+.....|+++
T Consensus       104 ~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~~-~~~~------------------~~~~~~~G~ll  152 (293)
T PRK10532        104 EFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLLP-LGQD------------------VSHVDLTGAAL  152 (293)
T ss_pred             HHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheeee-cCCC------------------cccCChHHHHH
Confidence            457899998876    35443        44567888999988771 1111                  01112379999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHH
Q 026401           83 LLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVH  162 (239)
Q Consensus        83 ~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~  162 (239)
                      .+.++++|+.|.+..|+..++++ +... .+..+++++.+.+.....+. ...+   +...|..++++|++++.++|.+|
T Consensus       153 ~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~---~~~~~~~~l~lgv~~t~~~~~l~  226 (293)
T PRK10532        153 ALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG-EALW---HWSILPLGLAVAILSTALPYSLE  226 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC-cccC---CHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999887774 6665 45667777777776654322 1111   12345567899999999999999


Q ss_pred             HHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccc
Q 026401          163 TFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  223 (239)
Q Consensus       163 ~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~  223 (239)
                      ++++++.++++++++.+++|+++.+++++++||++++.+++|+++|+.|+....+..+||.
T Consensus       227 ~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~  287 (293)
T PRK10532        227 MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP  287 (293)
T ss_pred             HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            9999999999999999999999999999999999999999999999999998876655533

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.88  E-value=1e-21  Score=167.85  Aligned_cols=182  Identities=13%  Similarity=0.077  Sum_probs=137.0

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.++.|+++.+++++++|||++++      +++|+++++.|+.++.. + +.                  .. ....|..
T Consensus        95 l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~-~~------------------~~-~~~~g~~  147 (281)
T TIGR03340        95 LARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-S-RF------------------AQ-HRRKAYA  147 (281)
T ss_pred             HHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-c-cc------------------cc-cchhHHH
Confidence            356889999999999999999999      99999999999998872 1 10                  01 1125778


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCchHH----HHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPAEFV----VTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      +.+.++++|+.|.+..|+..++.+ +..    .+.+.+...++...+.....+..  .+. .+...++.+++.+.+++.+
T Consensus       148 ~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~s~l  223 (281)
T TIGR03340       148 WALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQILPSATLGGLMIGG  223 (281)
T ss_pred             HHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHHHHHHHHHHHHHHHH
Confidence            899999999999999988655442 221    22233222222222222111111  111 1123456778888889999


Q ss_pred             HHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhh
Q 026401          158 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  214 (239)
Q Consensus       158 ~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~  214 (239)
                      +|.+|++++++.++++++.+.+++|+++++++++++||+++..+++|+++++.|+++
T Consensus       224 ~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       224 AYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.87  E-value=6.2e-22  Score=170.37  Aligned_cols=181  Identities=10%  Similarity=0.088  Sum_probs=133.5

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.++.|+++.+++++++|||++++      ++.|+++++.|+.++..   +.                  ++ .    ..
T Consensus       105 l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~---~~------------------~~-~----~~  152 (296)
T PRK15430        105 GYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLW---TF------------------GS-L----PI  152 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHH---Hc------------------CC-c----cH
Confidence            457899999999999999999999      99999999999999872   10                  00 0    14


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      +.++++++||.|.+..|+..++.. +....+.+.+.++.+...+..   ......+...+...+..+++.|+ ++.++|.
T Consensus       153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~  228 (296)
T PRK15430        153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQNPMSLNLLLIAAGI-VTTVPLL  228 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccCCcHHHHHHHHHHHH-HHHHHHH
Confidence            678899999999999998754321 223344445444444332221   11111111111112333444555 6889999


Q ss_pred             HHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          161 VHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      +|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+.+....
T Consensus       229 ~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        229 CFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998887776543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.86  E-value=2.2e-20  Score=161.58  Aligned_cols=201  Identities=19%  Similarity=0.275  Sum_probs=159.6

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +..++-.++++++++++|||+++.      +++|+++|++|+.+++.  .|..+.           +++....+..+|++
T Consensus       111 L~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~--sD~~~~-----------~~~~~~~~~i~GDl  171 (334)
T PF06027_consen  111 LDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVV--SDVLSG-----------SDSSSGSNPILGDL  171 (334)
T ss_pred             hhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheee--eccccc-----------ccCCCCCccchhHH
Confidence            345678899999999999999999      99999999999999884  222111           11123445679999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCC-CcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      +++.|++.||.++++.++..++.+ ...+.++..+++.++..+.....|.. ....+..  ...+.+.....++...-|.
T Consensus       172 l~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~--~~~~~~~v~~~~~lf~~y~  248 (334)
T PF06027_consen  172 LALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWT--SQVIGLLVGYALCLFLFYS  248 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC--hhhHHHHHHHHHHHHHHHH
Confidence            999999999999999999999995 88999999999999998888776653 2222211  1222332222335567777


Q ss_pred             HHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccccc
Q 026401          161 VHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA  224 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~  224 (239)
                      +....++..+|+...+-..+..+++++++++++|+++++..++|.++|++|.+++...++++++
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~  312 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEE  312 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccc
Confidence            8889999999999999999999999999999999999999999999999999998776554433

Some of the sequences in this family are annotated as putative membrane proteins.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.84  E-value=3.4e-20  Score=163.03  Aligned_cols=188  Identities=20%  Similarity=0.220  Sum_probs=150.3

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.+++|+++++++++++|||++++      ++.+++++++|+.+.+.  ++                   .+. ...|++
T Consensus       146 ika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~~-------------------~~~-~~~G~~  197 (350)
T PTZ00343        146 VKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--KE-------------------LHF-TWLAFW  197 (350)
T ss_pred             HHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--cc-------------------chh-HHHHHH
Confidence            346899999999999999999999      99999999999999872  11                   111 247999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcC------chHHHHHHHHHHHHHHHHHHHHhccCCC--cccc----cCCchhHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYP------AEFVVTLLYCLFATIISAPICFVGESNL--SAWR----LKPDIELASIVY  149 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~  149 (239)
                      ++++|+++|++++++.|+..++.+      ++.....++...+++.++|+....|...  ..+.    ......+..+++
T Consensus       198 ~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~  277 (350)
T PTZ00343        198 CAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF  277 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH
Confidence            999999999999999999886531      3555666668899999999887554321  1110    000112233445


Q ss_pred             HHHHHHHHHHHHHHH----hhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          150 SAFFGLSFITVVHTF----GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       150 ~gi~~~~~~~~l~~~----a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      . ++.++++|++|+.    ++++.+|.+.++..++.|++++++|++++||++++.+++|+++++.|++++.+-
T Consensus       278 ~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        278 K-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            4 5578999999995    999999999999999999999999999999999999999999999999988754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.80  E-value=1.9e-18  Score=146.74  Aligned_cols=185  Identities=22%  Similarity=0.317  Sum_probs=145.2

Q ss_pred             CCcchHHHHHHHHH-HhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHH
Q 026401            2 IGNLTPGFTFILAI-IFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGG   80 (239)
Q Consensus         2 i~~~~P~~~~~la~-~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~   80 (239)
                      +.++.|+++.++++ +++|||++++      ++.++++++.|+.++.. .++. +                ... ...|+
T Consensus       102 l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~-~~~~-~----------------~~~-~~~g~  156 (292)
T COG0697         102 IIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL-GGGG-G----------------GIL-SLLGL  156 (292)
T ss_pred             HHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec-CCCc-c----------------hhH-HHHHH
Confidence            45789999999997 7779999999      99999999999999882 1110 0                000 45899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCchHHHHH-HHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHH
Q 026401           81 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTL-LYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  159 (239)
Q Consensus        81 l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~  159 (239)
                      ++.+.++++|+.+.+..|+.. +. ++..... ++..  ...............   .......+..+.+.|++++.++|
T Consensus       157 ~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~i~~  229 (292)
T COG0697         157 LLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLL--LALLLLLLFFLSGFG---APILSRAWLLLLYLGVFSTGLAY  229 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHH--HHHHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999887 55 3555555 4433  222222221111111   11123468889999999999999


Q ss_pred             HHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          160 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       160 ~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      .+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+.+++.|+.+...+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         230 LLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999988765

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.74  E-value=8.3e-19  Score=143.67  Aligned_cols=198  Identities=21%  Similarity=0.200  Sum_probs=157.1

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      |..++|.+|++++|.++||+.++.      ...+.++.+.|+++++  +.+...+.+...      .+++.....+.|..
T Consensus       129 ItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g------~~~s~~~~~~~gt~  194 (346)
T KOG4510|consen  129 ITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEG------EDSSQVEYDIPGTV  194 (346)
T ss_pred             EEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCccc------cccccccccCCchH
Confidence            567899999999999999999999      9999999999999999  666555432211      11112233446788


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccC-CchhHHHHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLK-PDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      .++.++++.|...++.|+.-|+.+ .+....+..+++.+..++......    .++.+ ...+|+.++.+|++ +.+++.
T Consensus       195 aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr~l~~~lGvf-gfigQI  268 (346)
T KOG4510|consen  195 AAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDRWLFVNLGVF-GFIGQI  268 (346)
T ss_pred             HHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc----ceecCccccceEEEEEehhh-hhHHHH
Confidence            899999999999999999888884 566666666777776665554322    33333 24578888899995 579999


Q ss_pred             HHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccc
Q 026401          161 VHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~  219 (239)
                      +.+.++|+-.+..+++..+.+.+++.+|..+++||.++++.|.|+++++.+.+.+..+|
T Consensus       269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998877665544

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.72  E-value=8.2e-17  Score=137.61  Aligned_cols=203  Identities=21%  Similarity=0.332  Sum_probs=162.2

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +++++-+||..++.++..||+++.      |.+++.+++.|++++..  ++.-.            .++..+.+...|++
T Consensus       191 lSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~--~~s~~------------~~~~~a~~~llG~l  250 (416)
T KOG2765|consen  191 LSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTM--GDSKQ------------NSDLPASRPLLGNL  250 (416)
T ss_pred             hhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEe--ccccc------------cccCCccchhHHHH
Confidence            467899999999999999999999      99999999999999984  22111            11223445579999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcC---chHHHHHHHHHHHHHHHHHHHHhccC-CCcccccCCchhHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYP---AEFVVTLLYCLFATIISAPICFVGES-NLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      +++.+++.||.|.++.||...++.   |-..+.++..++..+.++|..++... ..+.+..++......+++.+.+.+.+
T Consensus       251 laL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvv  330 (416)
T KOG2765|consen  251 LALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVV  330 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHH
Confidence            999999999999999999887663   34455555566666666665554322 22344454545566778888899999


Q ss_pred             HHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccccc
Q 026401          158 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEA  224 (239)
Q Consensus       158 ~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~  224 (239)
                      +-++|.+|.-...|..+.+-+.++.+.+.+...++-|.++++.+++|...|++|.+++++..+...+
T Consensus       331 SDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~  397 (416)
T KOG2765|consen  331 SDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKK  397 (416)
T ss_pred             HHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccc
Confidence            9999999999999999999999999999999999889999999999999999999998876554433

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.68  E-value=1.5e-15  Score=111.46  Aligned_cols=135  Identities=17%  Similarity=0.118  Sum_probs=117.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHH
Q 026401           80 GLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  159 (239)
Q Consensus        80 ~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~  159 (239)
                      .++++.+++++++..++.|...++. ||..-+....+...+.+....+.... .......+.+.|..++..|+ .++.++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~glsw   81 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHHH
Confidence            4789999999999999999999999 79999999999998888888776443 11111124567888899996 889999


Q ss_pred             HHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          160 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       160 ~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      .+|++|+|..+++++.++..+.|++++++|++++||+++..+++|+++|++|..++.+
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999999999999999987654

>TIGR00688 rarD rarD protein

Probab=99.68  E-value=3.4e-16  Score=131.89  Aligned_cols=154  Identities=8%  Similarity=0.012  Sum_probs=108.7

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHH
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGL   81 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l   81 (239)
                      +.+++|+|+++++++++|||++++      ++++++++++|+.++..   +.                  .+.     ..
T Consensus       102 l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~---~~------------------~~~-----~~  149 (256)
T TIGR00688       102 GYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV---LK------------------GSL-----PW  149 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH---Hc------------------CCc-----hH
Confidence            357899999999999999999999      99999999999998772   10                  000     13


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVV  161 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l  161 (239)
                      +.+.++++|+.|.+..||..++.  ........ +.......+.... ..........+...|..+++.|++ +.++|.+
T Consensus       150 ~~l~aa~~~a~~~i~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~-t~i~~~l  224 (256)
T TIGR00688       150 EALVLAFSFTAYGLIRKALKNTD--LAGFCLET-LSLMPVAIYYLLQ-TDFATVQQTNPFPIWLLLVLAGLI-TGTPLLA  224 (256)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCC--cchHHHHH-HHHHHHHHHHHHH-hccCcccccCchhHHHHHHHHHHH-HHHHHHH
Confidence            57889999999999999875432  22221111 1111111111111 111111111122367788888885 8899999


Q ss_pred             HHHhhcccCceEEeeccchHHHHHHHHHHHH
Q 026401          162 HTFGLRMKGPVYTAIFKPLSIAIAAITSFIF  192 (239)
Q Consensus       162 ~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~  192 (239)
                      |++++|+.++++++++.|++|+++++++.+.
T Consensus       225 ~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       225 FVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.62  E-value=1.7e-14  Score=124.62  Aligned_cols=200  Identities=17%  Similarity=0.177  Sum_probs=155.7

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      +..|+++++++.+++|+|.+++      ++.++++..+|+.+..+.+.....            ........+..|.+++
T Consensus        98 s~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~------------~~~~~~~~~~~G~~ll  159 (303)
T PF08449_consen   98 SSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSS------------SSNSSSFSSALGIILL  159 (303)
T ss_pred             hhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeeccccccc------------ccccccccchhHHHHH
Confidence            4679999999999999999999      999999999999998852211111            0011122233599999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHh--ccCCCc--ccccCCchhHHHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFV--GESNLS--AWRLKPDIELASIVYSAFFGLSFI  158 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~~~gi~~~~~~  158 (239)
                      +.+.++.+...+.+++..+++. ++....++...++.+..++....  .....+  ......+..+..++...+ ++.++
T Consensus       160 ~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g  238 (303)
T PF08449_consen  160 LLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALG  238 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHH
Confidence            9999999999999999887764 57788899999998888877766  222111  111111223444444444 67788


Q ss_pred             HHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccc
Q 026401          159 TVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  222 (239)
Q Consensus       159 ~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~  222 (239)
                      ....++..++.++...++...+.-+++++++++++|+++++.+|+|.++++.|..+..+.|+|+
T Consensus       239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            8888899999999999999999999999999999999999999999999999999998877764

; GO: 0055085 transmembrane transport

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.61  E-value=1.1e-14  Score=124.95  Aligned_cols=182  Identities=12%  Similarity=0.112  Sum_probs=136.4

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchh----hhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHH
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAK----IIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGG   80 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~----~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~   80 (239)
                      ++|++..+.+.+++|||.+++      +    .+|++++++|+.++.. ..++..            .++ ...+...|.
T Consensus        95 ~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~-~~~~~~------------~~~-~~~~~~~Gi  154 (290)
T TIGR00776        95 FQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSR-SKDKSA------------GIK-SEFNFKKGI  154 (290)
T ss_pred             HHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEe-cccccc------------ccc-cccchhhHH
Confidence            778889999999999999999      8    9999999999988762 111000            000 002234799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHH---HHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHH
Q 026401           81 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCL---FATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        81 l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      ++.+.++++|+.|.+..|+.  ++ +|....+.+..   .+++...+.. .  .. .++.   .+..+..+..|++ ..+
T Consensus       155 ~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-~--~~-~~~~---~~~~~~~~~~Gi~-~~i  223 (290)
T TIGR00776       155 LLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-I--LA-KPLK---KYAILLNILPGLM-WGI  223 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH-h--cc-cchH---HHHHHHHHHHHHH-HHH
Confidence            99999999999999999975  46 57777444433   3333322221 1  00 1111   1233334448887 799


Q ss_pred             HHHHHHHhhc-ccCceEEeeccchHHHHHHHHHHHHhcCccchhhH----HHHHHHHHhhhhhhc
Q 026401          158 ITVVHTFGLR-MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTVLW  217 (239)
Q Consensus       158 ~~~l~~~a~~-~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~----~G~~li~~gi~~~~~  217 (239)
                      ++.+|..+.+ +.++++++.+.+.+|+.+.+++++++||+.++.++    +|+++++.|+.+...
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            9999999999 99999999999999999999999999999999999    999999999887644

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.59  E-value=4.1e-15  Score=110.84  Aligned_cols=125  Identities=15%  Similarity=0.268  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 026401           88 LLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR  167 (239)
Q Consensus        88 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~  167 (239)
                      ++|+.+.+..|+..++. |+...+.+++..+++ +++.........  ....+...+..+++.+++++.+++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            46899999999999998 599999999999998 666665544322  12223346777888888888999999999999


Q ss_pred             ccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          168 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       168 ~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      +.++++++++.+++|+++.+++++++||++++.+++|+++++.|+++..
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.59  E-value=3.9e-14  Score=115.57  Aligned_cols=166  Identities=16%  Similarity=0.106  Sum_probs=131.8

Q ss_pred             hhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHH
Q 026401           32 KIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVT  111 (239)
Q Consensus        32 ~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~  111 (239)
                      ....+.+++.|+.++.- .++.                  ...-.-.|..+++.++.+|+.|.+..||.-+..+ .-.-.
T Consensus       121 d~vwvaLAvlGi~lL~p-~~~~------------------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~  180 (292)
T COG5006         121 DFVWVALAVLGIWLLLP-LGQS------------------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGV  180 (292)
T ss_pred             hHHHHHHHHHHHHhhee-ccCC------------------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHH
Confidence            66788889999998881 1111                  1112238999999999999999999999886664 67777


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHH
Q 026401          112 LLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI  191 (239)
Q Consensus       112 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~  191 (239)
                      ...+.+++++.+|+...... +.-++   +.-...-+..+++++.+.|.+=..+++|.++...+.+.+++|.++.+.+++
T Consensus       181 a~gm~vAaviv~Pig~~~ag-~~l~~---p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i  256 (292)
T COG5006         181 AVGMLVAALIVLPIGAAQAG-PALFS---PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLI  256 (292)
T ss_pred             HHHHHHHHHHHhhhhhhhcc-hhhcC---hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHH
Confidence            88889999999999874221 21121   224455667889999999999999999999999999999999999999999


Q ss_pred             HhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          192 FLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       192 ~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ++||++++.||+|.++|+.+..=..+..||
T Consensus       257 ~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         257 FLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            999999999999999999877654444333

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.56  E-value=7.8e-14  Score=116.32  Aligned_cols=180  Identities=7%  Similarity=0.039  Sum_probs=137.9

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      +..|++.++++.+++|||+++.      |+++++++.+|+..... +.                    ++..     ...
T Consensus       106 ~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~-~~--------------------g~lp-----wva  153 (293)
T COG2962         106 FINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTW-LL--------------------GSLP-----WVA  153 (293)
T ss_pred             HHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHH-Hc--------------------CCCc-----HHH
Confidence            5689999999999999999999      99999999999999884 11                    1112     355


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHT  163 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~  163 (239)
                      +.-++.|+.|..+.|+.  ++ |+..-.+.-++.-....+.+.+..+.........+...+..++..|. .|.+...++.
T Consensus       154 l~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~  229 (293)
T COG2962         154 LALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFA  229 (293)
T ss_pred             HHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHH
Confidence            66678899999887764  34 34444444444444444444444333221011112345777778888 6889999999


Q ss_pred             HhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccc
Q 026401          164 FGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       164 ~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~  219 (239)
                      .+-|+.+-+..+.++|++|..-.+++.+++||+++..+++.-++|-.|+.++..+.
T Consensus       230 ~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         230 AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999987643

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.49  E-value=3.2e-14  Score=116.24  Aligned_cols=184  Identities=15%  Similarity=0.139  Sum_probs=145.7

Q ss_pred             HHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHHHHHH
Q 026401            9 FTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNL   88 (239)
Q Consensus         9 ~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~   88 (239)
                      .+.+++|+++|.|.++.      ++.|+++|+.|++++++              .|.|+++..++.+..+|+.+.+.++-
T Consensus       117 ~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~--------------sDV~agd~aggsnp~~GD~lvi~GAT  176 (336)
T KOG2766|consen  117 CVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVF--------------SDVHAGDRAGGSNPVKGDFLVIAGAT  176 (336)
T ss_pred             HHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEE--------------eeeccccccCCCCCccCcEEEEecce
Confidence            46788999999999999      99999999999999994              13455555556677799999999999


Q ss_pred             HHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 026401           89 LISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRM  168 (239)
Q Consensus        89 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~  168 (239)
                      +||+.++....+.++. |...++.+..++|+++..+-..+...+....+.  .... .......++...-|.+.-..+|.
T Consensus       177 lYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w--~~~i-~~yl~f~L~MFllYsl~pil~k~  252 (336)
T KOG2766|consen  177 LYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFIFERHHVSTLHW--DSAI-FLYLRFALTMFLLYSLAPILIKT  252 (336)
T ss_pred             eeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhhhccceeeEee--hHHH-HHHHHHHHHHHHHHHhhHHheec
Confidence            9999999999999999 599999999999999998885442222222221  1111 22222334555566677788899


Q ss_pred             cCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          169 KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       169 ~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      .+++...+-..+.-.+++++  ..+|-+.+|..++..+.+..|..++..+
T Consensus       253 ~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  253 NSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             CCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            99999999999999999999  5688889999999999999999888543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.46  E-value=1.4e-12  Score=105.57  Aligned_cols=189  Identities=15%  Similarity=0.154  Sum_probs=155.4

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHH
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLL   84 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l   84 (239)
                      .-|+=+++++.++.+.+.+++      +...++..+.|+.+.. |+.+...+              ..+.....|.++++
T Consensus       120 cKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValFm-YK~~Kv~g--------------~e~~t~g~GElLL~  178 (337)
T KOG1580|consen  120 CKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALFM-YKENKVGG--------------AEDKTFGFGELLLI  178 (337)
T ss_pred             CCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHhh-ccccccCC--------------CcccccchHHHHHH
Confidence            457888899999999999999      9999999999999988 56554432              12334558999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCc--ccccCCchhHHHHHHHHHHHHHHHHHH
Q 026401           85 ISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLS--AWRLKPDIELASIVYSAFFGLSFITVV  161 (239)
Q Consensus        85 ~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gi~~~~~~~~l  161 (239)
                      .|--.-+.....+.|..+++- ....++++..+.+++.+..-.+++....+  -+....+..|+.+...++ ++.+++++
T Consensus       179 lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~f  257 (337)
T KOG1580|consen  179 LSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWF  257 (337)
T ss_pred             HHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHH
Confidence            999999999999998877762 46788889999999887766665443221  122223456778888888 78899999


Q ss_pred             HHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhh
Q 026401          162 HTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  215 (239)
Q Consensus       162 ~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~  215 (239)
                      .+..+...||..-|+++...-.|+++.|.++++++++..||+|.++++.++..=
T Consensus       258 IF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  258 IFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            999999999999999999999999999999999999999999999999998763

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.27  E-value=5.6e-12  Score=108.30  Aligned_cols=188  Identities=13%  Similarity=0.214  Sum_probs=149.7

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      .++|+++.++++++.+|+.+.+      .+..++....|+.+-..   .                  +... ...|.+.+
T Consensus       117 a~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~---~------------------e~~f-n~~G~i~a  168 (316)
T KOG1441|consen  117 ALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV---T------------------ELSF-NLFGFISA  168 (316)
T ss_pred             hhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee---c------------------cccc-cHHHHHHH
Confidence            5789999999999999999999      99999999999988772   1                  1122 24899999


Q ss_pred             HHHHHHHHHHHHHHHHHhh----hcCchHHHHHHHHHHHHHHHH-HHHHhccCCCc------ccccCCchhHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMK----LYPAEFVVTLLYCLFATIISA-PICFVGESNLS------AWRLKPDIELASIVYSAF  152 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~----~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi  152 (239)
                      +.+.+..+..+++.|+..+    +. |++....++.-++.+.++ |+....+++..      .|+.    ....+++.. 
T Consensus       169 ~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s-  242 (316)
T KOG1441|consen  169 MISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFV----TFLILLLNS-  242 (316)
T ss_pred             HHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccch----hhHHHHHHH-
Confidence            9999999999999999884    24 688888898889999888 77665444322      2332    122233332 


Q ss_pred             HHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccccc
Q 026401          153 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG  225 (239)
Q Consensus       153 ~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~~  225 (239)
                      ++.......-+..+.+++|.+-++.+.+--++.++.|+++++|+.++.+..|+++-+.|++.+.+.|.+++++
T Consensus       243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            2344444556678899999999999999999999999999999999999999999999999998877765543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.25  E-value=9.3e-11  Score=100.94  Aligned_cols=140  Identities=9%  Similarity=0.052  Sum_probs=110.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCc-ccccCCchhHHHHHHHHHH
Q 026401           75 RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLS-AWRLKPDIELASIVYSAFF  153 (239)
Q Consensus        75 ~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~  153 (239)
                      +...|.++++.+++.|+...+..|.. .+++ |..+.+++++++.+.+.+......+... .....+...+ .....+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHH
Confidence            34589999999999999999999875 6774 9999999999998877766543221110 0000011122 33345666


Q ss_pred             HHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          154 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      .....+.++++++++.++++++++.++.|++..+++++++||+++..+++|+++.+.|+.+...
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            7778899999999999999999999999999999999999999999999999999999988753

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.24  E-value=2.1e-10  Score=98.03  Aligned_cols=132  Identities=14%  Similarity=0.132  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           81 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        81 l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      ++.+.++++||.+.+..||..++.+ +.  ..+.+..+++.++++...... ...|+..+ ..++..+..+.+.....+.
T Consensus         4 ~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~   78 (281)
T TIGR03340         4 TLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHHH
Confidence            5788999999999999998877763 43  355556666666666654211 12233222 2344444445557788899


Q ss_pred             HHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          161 VHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      ++++++++.+++.++++.++.|+++.+++++++||+++..+++|+++++.|+++...
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999999999999999988764

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.17  E-value=3.4e-10  Score=95.31  Aligned_cols=137  Identities=9%  Similarity=0.084  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCC---cccccCCchh-HHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL---SAWRLKPDIE-LASIVYSAFF  153 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gi~  153 (239)
                      .|.++.+.+++.|+...+..|. ..+. +|..+.+++++++++.+.+......+..   ..++...... +..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4788999999999999999998 4567 5999999999999888776654322110   1111111122 3345556654


Q ss_pred             HHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          154 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                       ..+.+.++++++++.++.+++.+.++.|+++.+++++++||+++..+++|..+.+.|+.+...
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence             668899999999999999999999999999999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=99.10  E-value=1.2e-09  Score=82.44  Aligned_cols=123  Identities=20%  Similarity=0.177  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      .|.++.+.+.++-+..+++-|+..++.+ .......     .+ .......              .....++.|+++..+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-----~~-~~~~~~~--------------~p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-----FI-AALLAFG--------------LALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-----HH-HHHHHHh--------------ccHHHHHHHHHHHHH
Confidence            3668888898999999999999888875 2221111     01 0001110              011358889999999


Q ss_pred             HHHHHHHhhcccCceEEeeccchHHHHHHHHHHH--HhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          158 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI--FLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       158 ~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~--~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ++.+|.+++++.+.+.+..+....++...+.++.  ++||++++.+++|+++|+.|+++..+.+++
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            9999999999999999999999998888888885  899999999999999999999998764443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.10  E-value=1.3e-09  Score=84.40  Aligned_cols=138  Identities=16%  Similarity=0.215  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh------cCchHHHHHHHHHHHHHHHHHHHHhccCCCc-c--ccc-----C-Cchh
Q 026401           79 GGLLLLISNLLISVWYIIQTQTMKL------YPAEFVVTLLYCLFATIISAPICFVGESNLS-A--WRL-----K-PDIE  143 (239)
Q Consensus        79 G~l~~l~s~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~--~~~-----~-~~~~  143 (239)
                      |.++++.|.++.++++++.|+..++      ..++.....+....+.+.+++..++.+.... .  ...     . ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5688999999999999999987766      2279999999999999999999888765321 1  100     0 1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          144 LASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       144 ~~~l~~~gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      +..++..|+ ....-....+..+++.+|...++...+..+..++.|++++||+++..++.|.++.+.|.+.+.|
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            445555555 3445666777889999999999999999999999999999999999999999999999987754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.95  E-value=1.6e-08  Score=84.75  Aligned_cols=193  Identities=15%  Similarity=0.180  Sum_probs=131.0

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHH
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLL   82 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~   82 (239)
                      .++-.++|++++++++|+|++++      ||.++++-++|+.+.-. ++.. ...+.   ++.....+..+.+...|.++
T Consensus        50 ~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~lv~~-~~~~-~~~~~---~~~~~~~~~~~~~~~~G~~~  118 (244)
T PF04142_consen   50 SQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVLVQL-SSSQ-SSDNS---SSSSVHHDASNQNPLLGLLA  118 (244)
T ss_pred             HhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHheeec-CCcc-ccccc---cccccccccccchhHhHHHH
Confidence            34567899999999999999999      99999999999998763 1111 10000   00000001123456789999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHH
Q 026401           83 LLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVV  161 (239)
Q Consensus        83 ~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l  161 (239)
                      .+.++++-+...++..+..|+.. +.+..+....+.|.++.++.....+... .........+-...+..++...++=.+
T Consensus       119 vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~-~~~~g~f~G~~~~~~~~i~~~a~gGll  197 (244)
T PF04142_consen  119 VLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA-ISESGFFHGYSWWVWIVIFLQAIGGLL  197 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccc-cccCCchhhcchHHHHHHHHHHHhhHH
Confidence            99999999999999988887763 3555666666777666666554332211 001111112222334444455555556


Q ss_pred             HHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHH
Q 026401          162 HTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVI  207 (239)
Q Consensus       162 ~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~l  207 (239)
                      ....+|+.+...=+....+..+.+.+.+++++|.+++....+|..+
T Consensus       198 va~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  198 VAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            6667888888888888899999999999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.94  E-value=1e-08  Score=86.18  Aligned_cols=119  Identities=12%  Similarity=0.052  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 026401           90 ISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMK  169 (239)
Q Consensus        90 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~~  169 (239)
                      |+...+..|...++..++.....++.+.+.+.+.+.....         .+.+.+...+..+.++..+.+.++++++++.
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~   71 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRL   71 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc---------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4555667777665444588888898888888777655431         1223555677777778889999999999999


Q ss_pred             CceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          170 GPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       170 ~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      ++..++++..++|+++.+++++++||++++.+++|+.+.++|+.+...
T Consensus        72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             ChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence            999999999999999999999999999999999999999999988764

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.94  E-value=1.7e-08  Score=86.66  Aligned_cols=131  Identities=10%  Similarity=0.007  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           81 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        81 l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      +..+.-.+.|+...+..|...++. +|..+.++++.++++.+++........   .  .+.+.+......|++.....+.
T Consensus        11 ~~~~~~~~iWg~~~~~~K~~~~~~-~p~~~~~~R~~~a~l~ll~~~~~~~~~---~--~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272         11 GALFALYIIWGSTYLVIRIGVESW-PPLMMAGVRFLIAGILLLAFLLLRGHP---L--PTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhCCC---C--CcHHHHHHHHHHHHHHHHHHHH
Confidence            446677788999999999888888 599999999999999988876542211   1  1223566667777776667788


Q ss_pred             HHHHhh-cccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          161 VHTFGL-RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       161 l~~~a~-~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      +++.+. ++.+++.++++.++.|+++.+++++ +||+++..+++|.++.++|+++....
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            889998 9999999999999999999999985 79999999999999999999887643

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.93  E-value=9.2e-09  Score=86.49  Aligned_cols=191  Identities=14%  Similarity=0.131  Sum_probs=148.8

Q ss_pred             HHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHHHHHHH
Q 026401           10 TFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLL   89 (239)
Q Consensus        10 ~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~   89 (239)
                      +++...+..|.|.+..      +....++.-.|+.+..+++..+ +            .....+.+-.+|..++...-++
T Consensus       123 Vmlmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-s------------~~~~g~~ns~~G~~Ll~~~L~f  183 (327)
T KOG1581|consen  123 VMLMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-S------------SSKSGRENSPIGILLLFGYLLF  183 (327)
T ss_pred             HHHHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-C------------ccccCCCCchHhHHHHHHHHHH
Confidence            5677889999999999      9999999999998888532221 1            1112333455899999999999


Q ss_pred             HHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCC-c--ccccCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 026401           90 ISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL-S--AWRLKPDIELASIVYSAFFGLSFITVVHTFG  165 (239)
Q Consensus        90 ~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a  165 (239)
                      -+..+..++++.+++. ++..++++..+++++......+ ..++. +  .+-...++.+.-++.... ++.+++.+.++-
T Consensus       184 DgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~T  261 (327)
T KOG1581|consen  184 DGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYT  261 (327)
T ss_pred             HhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhh
Confidence            9999999998887653 5888999999999888776643 23221 1  222222344555666656 677999999999


Q ss_pred             hcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          166 LRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       166 ~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      +++.|+.....++.+.-.++++++.+.+|.+++..|++|..+++.|+..-...|++
T Consensus       262 I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  262 IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999986665555

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.89  E-value=1.3e-07  Score=78.64  Aligned_cols=198  Identities=16%  Similarity=0.153  Sum_probs=134.6

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCC-CCCCCCCCchHHHHHHH
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLH-WTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~l~~   83 (239)
                      -+++-++.++|++.|.|.+.+      |+.++++.-+|+++-.+...++...    ..++.. .+..+....|.+|..++
T Consensus       100 gsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~----~~~~l~~~~~~~~~~~w~iGi~lL  169 (330)
T KOG1583|consen  100 GSLLANMILGWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS----KLSGLDSGSAQSDFFWWLIGIALL  169 (330)
T ss_pred             CcHHHHHHHHHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh----hhcccccCcccccchHHHHHHHHH
Confidence            467889999999999999999      9999999999999988654433322    000111 11223345677899888


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCC-cc----ccc----------CCchhHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNL-SA----WRL----------KPDIELASI  147 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~----~~~----------~~~~~~~~l  147 (239)
                      ..+-+.-|.-.+.+.+.-+++. ++-...++.-+.+.    |..++...+. ++    +..          .-+..|+.+
T Consensus       170 ~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL----P~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL  245 (330)
T KOG1583|consen  170 VFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL----PLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL  245 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc----chHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHH
Confidence            8888888877777776666654 45556566555443    3333222210 00    110          012345445


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          148 VYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       148 ~~~gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      +.-.+ ....|---.+..-.+..+-++++...+.-.++.++|...++++++++.|+|..++++|-.++..
T Consensus       246 l~n~L-~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~  314 (330)
T KOG1583|consen  246 LFNVL-TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN  314 (330)
T ss_pred             HHHHH-HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            44333 3444444445556677888999999999999999999999999999999999999999888653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.89  E-value=2.3e-08  Score=88.26  Aligned_cols=139  Identities=15%  Similarity=0.200  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      .-.+.++..-++|+.+.++.|...++--++....++++.+++++++++.+..++.. .++..+...|..+...|++. .+
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~~~~~~~~~~~l~l~g~~g-~~   90 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SLPPLSVSILSKIGLLGFLG-SM   90 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-ccCcchHHHHHHHHHHHHHH-HH
Confidence            45567778888999999999987766447999999999999999998887543211 11111123456677777766 45


Q ss_pred             HHHHHHHhhcccCceEEeeccchHHHHHHHHHHHH------hcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          158 ITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF------LSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       158 ~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~------lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      .+.+++.++++++++.++++.++.|+++.++++++      ++|+++..+++|.++-+.|+.+....
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            66689999999999999999999999999999999      69999999999999999999887653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.88  E-value=5.3e-09  Score=77.25  Aligned_cols=108  Identities=15%  Similarity=0.260  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHH
Q 026401          113 LYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIF  192 (239)
Q Consensus       113 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~  192 (239)
                      +.+.++.+.+...........+.++......+...+..|+++...++.+++++.++.++ .++++..+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            44555556555555543221111111112345566666776667899999999999995 88899999999999999999


Q ss_pred             hcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          193 LSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       193 lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ++|+++..++.|+.++++|+.+..+.+-+
T Consensus        82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   82 FKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            99999999999999999999998775443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.87  E-value=3.7e-08  Score=84.90  Aligned_cols=126  Identities=6%  Similarity=0.016  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           81 LLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        81 l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      ++.+.+++.|+...+..|...++. +|..+.++++.++++.++++..   ..  ..      .+..+...|+......+.
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~~-~p~~~~~~R~~~a~~~l~~~~~---~~--~~------~~~~~~~~g~~~~~~~~~   74 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHNM-PPLMLAGLRFMLVAFPAIFFVA---RP--KV------PLNLLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHhc---CC--CC------chHHHHHHHHHHHHHHHH
Confidence            568889999999999999988888 5999999999988776554431   11  11      111233445544445555


Q ss_pred             HHHHhhcc-cCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          161 VHTFGLRM-KGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       161 l~~~a~~~-~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      +++.+.++ .++..++++..+.|+++.+++++++||+++..+++|+++.++|+.+....
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence            77778877 57789999999999999999999999999999999999999999887743

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.82  E-value=3.9e-07  Score=78.54  Aligned_cols=201  Identities=13%  Similarity=0.162  Sum_probs=137.5

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      ++--+-|+++..+++++|++++      ||.++++.+.|+.++-.   +.....        .+.......+...|....
T Consensus       126 qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~---~~~~~~--------~a~~~~~~~n~~~G~~av  188 (345)
T KOG2234|consen  126 QLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQL---PSLSPT--------GAKSESSAQNPFLGLVAV  188 (345)
T ss_pred             hHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhc---cCCCCC--------CccCCCcccchhhhHHHH
Confidence            3445778999999999999999      99999999999988662   111100        001112334456899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVH  162 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~  162 (239)
                      +.+++.-+...++..+..|+-. +-+.-+....++|.++.+...+........|. .....|-...+..++..+++=.+.
T Consensus       189 l~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlv  267 (345)
T KOG2234|consen  189 LVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLV  267 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccC-CccccccHHHHHHHHHHhccchhH
Confidence            9998888888888887775532 46667777777887777766654332211111 111122233444444444444455


Q ss_pred             HHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccc
Q 026401          163 TFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  222 (239)
Q Consensus       163 ~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~  222 (239)
                      ..-+|+.+-..=+....+..+++.+.++.++|-+++....+|..+++.++.++...+.++
T Consensus       268 s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  268 SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            555666666655666678889999999999999999999999999999999998666654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.77  E-value=1.2e-07  Score=81.55  Aligned_cols=131  Identities=11%  Similarity=0.030  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      .+.++++.+++.|+...+..|...++.| |.....+++..++++++++..   .+  ..+   ...+..++. +.+....
T Consensus         4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~---~~--~~~---~~~~~~~~~-~~l~~~~   73 (295)
T PRK11689          4 KATLIGLIAILLWSTMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG---FP--RLR---QFPKRYLLA-GGLLFVS   73 (295)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc---cc--ccc---cccHHHHHH-HhHHHHH
Confidence            4567899999999999999999999995 999999999999888776531   11  111   011212222 3323334


Q ss_pred             HHHHHHHhh----cccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          158 ITVVHTFGL----RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       158 ~~~l~~~a~----~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      .+.+++.++    ++.++.+++++.++.|+++.++++++++|++++.+++|+++.++|+++....
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~  138 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG  138 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence            444555555    4567788889999999999999999999999999999999999999887653

>TIGR00803 nst UDP-galactose transporter

Probab=98.71  E-value=8.4e-08  Score=79.14  Aligned_cols=202  Identities=12%  Similarity=0.058  Sum_probs=121.6

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccc------cCCCCCCccCCCCCCCCCCchH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIM------STASIPAQSLHWTPQSTRSRWV   77 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~   77 (239)
                      +..|+++++..+.+.++|.+..      |+++.++...|++.-.+.+.+...      .....+.++.+ .......+..
T Consensus        12 s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~~~~~~g~~~   84 (222)
T TIGR00803        12 QNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS-AKTLMFGNPV   84 (222)
T ss_pred             hcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC-ccccccccHH
Confidence            4678999999999999999988      999999999998753321110000      00000000000 0001112445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCch-HHHHHHHHHHHHHHHHHHHHhccCCC-cccccCCchhHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAE-FVVTLLYCLFATIISAPICFVGESNL-SAWRLKPDIELASIVYSAFFGL  155 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~gi~~~  155 (239)
                      .|....+.+.++-+...+..++..++.... ..-+....+.+.+............. ..+..  ...+-...+.-++..
T Consensus        85 ~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  162 (222)
T TIGR00803        85 VGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF--FIGYPTAVWIVGLLN  162 (222)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCc--ccCCchHHHHHHHHH
Confidence            677777777777777777777765554211 11111222222222121111111111 11110  001111222223356


Q ss_pred             HHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhh
Q 026401          156 SFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYT  214 (239)
Q Consensus       156 ~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~  214 (239)
                      .++..+..+.+|+.++...+....++++++.+++++++||+++..++.|+.+++.|+++
T Consensus       163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            78888899999999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.70  E-value=7.1e-07  Score=75.33  Aligned_cols=185  Identities=17%  Similarity=0.212  Sum_probs=129.2

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      +.+++|+.+++.++.-||+++.      -..-+.+...|+++.+ +++.+                    . ...|..+.
T Consensus       118 SSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glflft-~KsTq--------------------f-~i~Gf~lv  169 (349)
T KOG1443|consen  118 SSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFT-YKSTQ--------------------F-NIEGFFLV  169 (349)
T ss_pred             ccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEE-ecccc--------------------e-eehhHHHH
Confidence            5689999999999999999998      7777888888888877 33221                    1 23677777


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC----chHHHHHHHHHHHHHHHHHHHHhccCCCc-----ccccCCc-hhHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYP----AEFVVTLLYCLFATIISAPICFVGESNLS-----AWRLKPD-IELASIVYSAFF  153 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~-~~~~~l~~~gi~  153 (239)
                      +.+.++-++...+.+...++.|    +|+.......-.-.+.++|..+..|+...     .|+.... ..+..+...+. 
T Consensus       170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-  248 (349)
T KOG1443|consen  170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-  248 (349)
T ss_pred             HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-
Confidence            7777766666665555554432    57777666666667777888877776421     2222211 12222222222 


Q ss_pred             HHHHHHHH---HHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          154 GLSFITVV---HTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       154 ~~~~~~~l---~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      ++..++.+   =+....+++..+.++..-..-+.+.+++..+.+|+++...|.|..+...|+...-+
T Consensus       249 ~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  249 GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            33333332   23456788999999999999999999999999999999999999999999988833

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.64  E-value=3.8e-07  Score=78.64  Aligned_cols=120  Identities=13%  Similarity=0.110  Sum_probs=94.7

Q ss_pred             HHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhcccCce
Q 026401           93 WYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKGPV  172 (239)
Q Consensus        93 ~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~~~~~  172 (239)
                      ++++.|...++.+.|...+..++..+.+...+...........   .+..+|..++..|++ ....+.+.++++++.+++
T Consensus        17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~s   92 (302)
T TIGR00817        17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLK---ISSALLKLLLPVAIV-HTIGHVTSNVSLSKVAVS   92 (302)
T ss_pred             HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHHHHH-HHHHHHHHHHHHHhccHH
Confidence            3456788888755699999999998877665542111111111   123467778888886 467788999999999999


Q ss_pred             EEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          173 YTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       173 ~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      ..+++..+.|+++.++++++++|+++..+++|.++++.|+.+..
T Consensus        93 ~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        93 FTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999997754

specificities overlap.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.64  E-value=1.4e-07  Score=78.38  Aligned_cols=196  Identities=15%  Similarity=0.138  Sum_probs=143.4

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      ++.-+|+.++...++|||-++.      ...+..+.+.|-.+=+  |.+..                 .+.--..|.++.
T Consensus       136 sLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv--dqE~~-----------------~~~ls~~GvifG  190 (347)
T KOG1442|consen  136 SLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV--DQEGS-----------------TGTLSWIGVIFG  190 (347)
T ss_pred             chhhhHHHHhHHhhcccccccc------cceeehhheehheecc--ccccc-----------------cCccchhhhHHH
Confidence            3566899999999999999998      7777777777765544  22211                 122224899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCcccc---cCCchhHHHHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWR---LKPDIELASIVYSAFFGLSFIT  159 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~~~~~~~  159 (239)
                      +.+.++-|+..+..|+...... .-+.++.+..+.+.+..+|...+.+.-...+.   .+....|+.+...|+++..++|
T Consensus       191 VlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy  270 (347)
T KOG1442|consen  191 VLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGY  270 (347)
T ss_pred             HHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999997654442 35788889999999988888876543222221   1123456667677776655555


Q ss_pred             HHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccccc
Q 026401          160 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG  225 (239)
Q Consensus       160 ~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~~  225 (239)
                      .- .+=+|-.+|.+-.+-....-..=.+++..+++|.-+..-|-|-+++++|-..+.+.|+.++++
T Consensus       271 vT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  271 VT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             ee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            42 134577888888888888888888999999999999999999999999998888877665443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.64  E-value=9.8e-07  Score=77.83  Aligned_cols=125  Identities=12%  Similarity=0.191  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 026401           91 SVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKG  170 (239)
Q Consensus        91 a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~~~  170 (239)
                      ..+++..|...++.|-|+.++.++++++.+.+.++............ .....+..++..|++.. ..+...+.++++.+
T Consensus        62 ~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~-~~~~~~~~sl~~~s  139 (350)
T PTZ00343         62 VLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL-FVHFGAVISMGLGA  139 (350)
T ss_pred             HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc
Confidence            44567888888888449999999999998776554322111111111 01234566777888554 45777789999999


Q ss_pred             ceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          171 PVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       171 ~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      ++.+.++..++|++++++++++++|+++..+++|+++++.|+.+...
T Consensus       140 vs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        140 VSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            99999999999999999999999999999999999999999998764

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.62  E-value=1.3e-06  Score=74.32  Aligned_cols=192  Identities=14%  Similarity=0.165  Sum_probs=145.4

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      +.+|+++++....++|.|++.+      .+.++..-.+|......   ++.                   .....|..++
T Consensus       111 n~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~---~d~-------------------sf~~~gY~w~  162 (314)
T KOG1444|consen  111 NLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF---TDL-------------------SFNLRGYSWA  162 (314)
T ss_pred             hchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc---ccc-------------------eecchhHHHH
Confidence            5789999999999999999999      99999998888877662   111                   1112489999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccC-C-----CcccccCCchhHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGES-N-----LSAWRLKPDIELASIVYSAFFGLS  156 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~~gi~~~~  156 (239)
                      +...+.-+.+.+..|+..+... +.+...++..+.+...+....++++. +     .+.|.  ....+..+...++++-+
T Consensus       163 ~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~--~~~~~~~~~lScv~gf~  240 (314)
T KOG1444|consen  163 LANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWS--DSSVLVVMLLSCVMGFG  240 (314)
T ss_pred             HHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccccc--chhHHHHHHHHHHHHHH
Confidence            9999999999999998764432 34567788888888888877766553 1     11232  12346677777776655


Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccccccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAGK  226 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~~~  226 (239)
                      +.|. -.+..+..+++..++.....-..+.+...++.|++.++...+|..+-+.|-.++.+.+.++++.+
T Consensus       241 isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~  309 (314)
T KOG1444|consen  241 ISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP  309 (314)
T ss_pred             HHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence            5554 44678889999999999888888888888888899999999999999999999988775554443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.60  E-value=2e-07  Score=68.64  Aligned_cols=66  Identities=12%  Similarity=0.034  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          151 AFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       151 gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      ++++.+.++.++.+++++.+.+.+..+.++.++++.+.|++++||++++.+++|.++++.|+++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            345678899999999999999999999999999999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.53  E-value=4.6e-06  Score=70.28  Aligned_cols=184  Identities=14%  Similarity=0.132  Sum_probs=122.0

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHH
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLL   84 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l   84 (239)
                      ++=+.+.+++.++++|.-+.+.+.-  -..++++.++|+.+-.. +.++.             +..+++.+...|.+.++
T Consensus        81 ~QLvg~sl~gv~~fgEW~~~~~~~~--G~~Al~liiiGv~lts~-~~~~~-------------~~~~~~~~~~kgi~~Ll  144 (269)
T PF06800_consen   81 LQLVGTSLIGVLFFGEWTTTTQKII--GFLALVLIIIGVILTSY-QDKKS-------------DKSSSKSNMKKGILALL  144 (269)
T ss_pred             HHHHHHHHHHHhhcCCCCCcchHHH--HHHHHHHHHHHHHHhcc-ccccc-------------cccccccchhhHHHHHH
Confidence            3445688899999999888761110  23477788888887663 22110             00112344567999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHH
Q 026401           85 ISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTF  164 (239)
Q Consensus        85 ~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~  164 (239)
                      ++.+.|..|.+..|.  .+. |+....+-+.+--.+..+.+..+......  .   ...| .=+..|+ .=.++-.+|..
T Consensus       145 ~stigy~~Y~~~~~~--~~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~~~--~---k~~~-~nil~G~-~w~ignl~~~i  214 (269)
T PF06800_consen  145 ISTIGYWIYSVIPKA--FHV-SGWSAFLPQAIGMLIGAFIFNLFSKKPFF--E---KKSW-KNILTGL-IWGIGNLFYLI  214 (269)
T ss_pred             HHHHHHHHHHHHHHh--cCC-ChhHhHHHHHHHHHHHHHHHhhccccccc--c---cchH-HhhHHHH-HHHHHHHHHHH
Confidence            999999999999875  345 46666665544333333333433211111  1   1122 2233344 34577788889


Q ss_pred             hhcccCceEEeeccchHHHHHHHHHHHHhcCccchh----hHHHHHHHHHhhhh
Q 026401          165 GLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLG----SVIGGVITCVGFYT  214 (239)
Q Consensus       165 a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~----~~~G~~li~~gi~~  214 (239)
                      +.++.|.+..=.+..+.++++.+.+.+++||+=+..    .++|.++++.|.++
T Consensus       215 s~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  215 SAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999997654    45688888887653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.49  E-value=7.4e-07  Score=70.89  Aligned_cols=190  Identities=15%  Similarity=0.202  Sum_probs=129.1

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      ...--|+.+++|+.+|||+.-.      |+.+.++++.|++++.+.+.                    ...+.++|..++
T Consensus        87 ~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN--------------------~~a~e~iGi~~A  140 (290)
T KOG4314|consen   87 ACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN--------------------EHADEIIGIACA  140 (290)
T ss_pred             HhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc--------------------hhhhhhhhHHHH
Confidence            3456789999999999999999      99999999999999884211                    223446899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHH---H-HHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATI---I-SAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  159 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i---~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~  159 (239)
                      ++|+..-|+|.+..|+...+.+ --...-++...|..   + ..|.........++|+..-..-|..+...+.+.- ---
T Consensus       141 V~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A~L~l-AFN  218 (290)
T KOG4314|consen  141 VGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAAGLSL-AFN  218 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHHHHHH-HHh
Confidence            9999999999999999876653 11222222222211   1 1111111111223344222223555655544332 222


Q ss_pred             HHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          160 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       160 ~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      .+.+.++....|-..|+-+.+..+-......++.+-..+.....|..+|.+|..+......+
T Consensus       219 ~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  219 FLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             hheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            35678888889999999888888888889988777778888899999999998887664443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.48  E-value=4e-06  Score=70.93  Aligned_cols=141  Identities=18%  Similarity=0.277  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHH
Q 026401           77 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLS  156 (239)
Q Consensus        77 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~  156 (239)
                      ..+....+..++.|+......|...++............+.+.+...+.... +. ....+..  ..+......+.+...
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~~~~~~~~~~~~   81 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EP-RGLRPAL--RPWLLLLLLALLGLA   81 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hc-ccccccc--cchHHHHHHHHHHHH
Confidence            3677888888899999999999887763224455454666666553222221 11 1111111  113455666666888


Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHH-HHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSF-IFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~-~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ..+.+|+.++++.++..+..+.++.|++..++++ ++++|+++..++.|..+.+.|+.+.......
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            9999999999999999999999999999999997 7679999999999999999999998765544

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.44  E-value=2.4e-06  Score=73.39  Aligned_cols=132  Identities=13%  Similarity=0.036  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHH
Q 026401           79 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  158 (239)
Q Consensus        79 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~  158 (239)
                      |.+++++++++|+...+..|+.. +.+ +....  ...++.+...........+.  ..  ....+..-+..|. .-.++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~-g~~-~~~~~--~~~~g~l~~~~~~~~~~~~~--~~--~~~~~~~g~l~G~-~w~ig   72 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG-GGP-YSQTL--GTTFGALILSIAIAIFVLPE--FW--ALSIFLVGLLSGA-FWALG   72 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC-CCH-HHHHH--HHHHHHHHHHHHHHHHhCCc--cc--ccHHHHHHHHHHH-HHHhh
Confidence            46789999999999999999865 443 33333  34555555444433322111  11  1112222223333 35678


Q ss_pred             HHHHHHhhcccCceEEeeccc-hHHHHHHHHHHHHhcCccchhh----HHHHHHHHHhhhhhhccc
Q 026401          159 TVVHTFGLRMKGPVYTAIFKP-LSIAIAAITSFIFLSEALHLGS----VIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       159 ~~l~~~a~~~~~~~~~s~~~~-l~Pv~a~l~~~~~lgE~~~~~~----~~G~~li~~gi~~~~~~~  219 (239)
                      +.+|+.++|+.|.+.+-.+.+ ++++++.+++.+++||+.+..+    ++|.+++++|+++....+
T Consensus        73 ~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        73 QINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             hhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            899999999999999988888 8999999999999999999999    999999999988875543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.34  E-value=5.7e-06  Score=69.65  Aligned_cols=140  Identities=14%  Similarity=0.110  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccc-cCCchhHHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWR-LKPDIELASIVYSAFFGLS  156 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~~~~  156 (239)
                      .|.++.+.+-+.|+.--.+.|-. ++.| +..+.....+.+...++.......+...-++ ...+..+..+...+.. ..
T Consensus         7 ~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i~   83 (293)
T COG2962           7 KGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-IG   83 (293)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-HH
Confidence            68999999999999998888765 5664 8899999999998887776655433222122 1123456666666664 45


Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      ..+.+|.|+..+....++|+--++.|.+.++.|.++++|+++..|++..++-.+|+....+...
T Consensus        84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            8999999999999999999999999999999999999999999999999999999988765443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.28  E-value=3.1e-06  Score=70.45  Aligned_cols=185  Identities=16%  Similarity=0.201  Sum_probs=135.2

Q ss_pred             HHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHHHHHHHH
Q 026401           11 FILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLISNLLI   90 (239)
Q Consensus        11 ~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s~~~~   90 (239)
                      ++.+.++-+.|....      .+++..+-.+|.++..+.|..  .+               .++ ..+|..+.-++-++-
T Consensus       147 miggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~--~s---------------PNF-~~~Gv~mIsgALl~D  202 (367)
T KOG1582|consen  147 MIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ--TS---------------PNF-NLIGVMMISGALLAD  202 (367)
T ss_pred             hheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc--cC---------------CCc-ceeeHHHHHHHHHHH
Confidence            445566777777777      999999999999998863221  11               122 237999988888998


Q ss_pred             HHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCCCcccccC---CchhHHHHHHHHHHHHHHHHHHHHHhh
Q 026401           91 SVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESNLSAWRLK---PDIELASIVYSAFFGLSFITVVHTFGL  166 (239)
Q Consensus        91 a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~~~~~~~~l~~~a~  166 (239)
                      |.-..++.+..+..| +...+.++...+|.+.++....++..-.+.|..-   +.+......+... .+.++.......+
T Consensus       203 A~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI  281 (367)
T KOG1582|consen  203 AVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALI  281 (367)
T ss_pred             HHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHH
Confidence            888888888777765 3456667777788777776666544332222211   1112222333323 5667777777888


Q ss_pred             cccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          167 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       167 ~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      +..|+..++.++...--+++++|++++..+++....-|..+++.|+++..+.|+
T Consensus       282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            999999999999999999999999999999999999999999999999887764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.25  E-value=4.5e-06  Score=72.02  Aligned_cols=201  Identities=14%  Similarity=0.163  Sum_probs=102.2

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHH
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLL   84 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l   84 (239)
                      +.-++.++++.+++|||++++      .+.|.++++.|..+++. .+|.-....  +.++..  ..-.+..+ +......
T Consensus        85 ~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~-~~~~~~~~~--t~~~l~--~~~~~~~f-l~y~~~~  152 (300)
T PF05653_consen   85 LSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVI-FAPKEEPIH--TLDELI--ALLSQPGF-LVYFILV  152 (300)
T ss_pred             hhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEE-eCCCCCCcC--CHHHHH--HHhcCcce-ehhHHHH
Confidence            445788999999999999999      99999999999998884 333211100  000000  00001111 1111111


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHH---HHH-hccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           85 ISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAP---ICF-VGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        85 ~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      .... ..+.....+|..++  +.........++|+...+.   ... +.+....+.+..++..|..++. -+.+...+..
T Consensus       153 ~~~~-~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~-~v~~~~~Q~~  228 (300)
T PF05653_consen  153 LVLI-LILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLV-LVVTAVLQLY  228 (300)
T ss_pred             HHHH-HHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHH-HHHHHHHHHH
Confidence            1111 12222222221111  1121111112222221111   010 0000000111112234434333 3446778888


Q ss_pred             HHHHhhcccCceEEeeccchH-HHHHHHHHHHHhcCcc--ch----hhHHHHHHHHHhhhhhhccccc
Q 026401          161 VHTFGLRMKGPVYTAIFKPLS-IAIAAITSFIFLSEAL--HL----GSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~-Pv~a~l~~~~~lgE~~--~~----~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ..|+++++.+++.+.++.+.. -..+++-|.++++|.-  +.    ....|..+++.|+++....|++
T Consensus       229 ~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~  296 (300)
T PF05653_consen  229 YLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDK  296 (300)
T ss_pred             HHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCch
Confidence            999999999999888877655 4556666777888754  33    3456888888999887654433

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.23  E-value=5.6e-07  Score=74.69  Aligned_cols=135  Identities=16%  Similarity=0.176  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHH
Q 026401           77 VIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLS  156 (239)
Q Consensus        77 ~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~  156 (239)
                      ++|.++.-+| .++....++.++...+  ||....-..++.-.++..|..+... .   +...+...-.+++.=|+ .+.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~-~---~v~gp~g~R~~LiLRg~-mG~  108 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYM-Q---PVIGPEGKRKWLILRGF-MGF  108 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEe-e---eeecCCCcEEEEEeehh-hhh
Confidence            3688888887 7788888888887766  4677766665544444443333211 1   11111112223444455 344


Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~  219 (239)
                      .+..+.++++++.+-+.++++++..|+++.+++|.+++|+.+....+|..+.+.|+++..+..
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            777788899999999999999999999999999999999999999999999999999887653

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.22  E-value=2.6e-05  Score=67.01  Aligned_cols=127  Identities=16%  Similarity=0.073  Sum_probs=97.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHH
Q 026401           76 WVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGL  155 (239)
Q Consensus        76 ~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~  155 (239)
                      ...|..++++++++|+......|...++.| |..+.+++++++++.++++.....  . .+   +.+++...+..|.+ .
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~--~-~~---~~~~~~~~~~~g~~-~   81 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR--L-RF---AKEQRLPLLFYGVS-L   81 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh--c-cC---CHHHHHHHHHHHHH-H
Confidence            347889999999999999999999998885 999999999999988876543211  1 11   12455566666664 5


Q ss_pred             HHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          156 SFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       156 ~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      ...+.++++++++.++..++.+.++.|+++.+++.    |++.  +..+..+.++|+++..
T Consensus        82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li~  136 (293)
T PRK10532         82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFLL  136 (293)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHheee
Confidence            67788899999999999999999999999988773    5554  3455666778887765

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.14  E-value=5.2e-05  Score=66.20  Aligned_cols=142  Identities=15%  Similarity=0.107  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh-cCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKL-YPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLS  156 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~  156 (239)
                      .+.++.-.-+++-+..+..+..+.++ .+.|..-+++.++.-.++..+...... ....+.......|+..+..++ .=.
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~-~~~~~~~~~~~~~w~y~lla~-~Dv   90 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRR-GFKKWLKVLKRPWWKYFLLAL-LDV   90 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhcc-ccccchhhcchhHHHHHHHHH-HHH
Confidence            34444444444444444444333322 223555555555544444443333211 112222222345666666776 556


Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      -+-++.+.|+++++.+.+.++.....+++.++++++++|+.++.+++|+.+.+.|+.++......
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            89999999999999999999999999999999999999999999999999999999988765543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.13  E-value=1.7e-05  Score=66.43  Aligned_cols=192  Identities=15%  Similarity=0.194  Sum_probs=131.5

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCC--CCCchHHHHHH
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQS--TRSRWVIGGLL   82 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~G~l~   82 (239)
                      ..-+|+.+++.-+++.+++.+      +|.|+....+|++.+-..  |            .|...++  .......|+++
T Consensus       121 aviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~--d------------~~~~~~p~~d~s~iitGdll  180 (372)
T KOG3912|consen  121 AVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL--D------------VHLVTDPYTDYSSIITGDLL  180 (372)
T ss_pred             chhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee--e------------cccccCCccccccchhhhHH
Confidence            345899999999999999999      999999999999887631  1            1111111  22456689999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcC-chHHHHHHHHHHHHHHHHHHHHhccCC--CcccccCC---chhHHH---------H
Q 026401           83 LLISNLLISVWYIIQTQTMKLYP-AEFVVTLLYCLFATIISAPICFVGESN--LSAWRLKP---DIELAS---------I  147 (239)
Q Consensus        83 ~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~---~~~~~~---------l  147 (239)
                      .+.+-+.-|+..++..|..++.. +|.....+..++|.+++..+......-  ...++-.+   .+.|..         .
T Consensus       181 IiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~  260 (372)
T KOG3912|consen  181 IIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPS  260 (372)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCch
Confidence            99999999999998877766543 699999999999977666555432211  00111111   011111         1


Q ss_pred             HHHHHHHHHHHHHHHH---Hhh-cccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          148 VYSAFFGLSFITVVHT---FGL-RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       148 ~~~gi~~~~~~~~l~~---~a~-~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      +++...+....-.++|   .++ |..++++=.+...+...+-=+++.....|.+...|+.|..+.+.|+.++.
T Consensus       261 l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  261 LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222222223333333   222 45677777788888888888888888899999999999999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.01  E-value=0.00011  Score=63.42  Aligned_cols=129  Identities=13%  Similarity=0.134  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHhhhcC-c--hHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 026401           91 SVWYIIQTQTMKLYP-A--EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLR  167 (239)
Q Consensus        91 a~~~v~~k~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~  167 (239)
                      ..+.+.+++..++.+ .  +..+++.++....+...+...........     ...+...+..++ ...++..+-+.+++
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~al~   86 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSR-----KIPLKKYAILSF-LFFLASVLSNAALK   86 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCC-----cChHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            344556666555432 3  77889999888888777766543311111     112233344444 56677889999999


Q ss_pred             ccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccccc
Q 026401          168 MKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDEAG  225 (239)
Q Consensus       168 ~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~~~  225 (239)
                      +.+...-.+.-...|+...+++++++|++.+..++++..++.+|+.+....+.+++++
T Consensus        87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~  144 (303)
T PF08449_consen   87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSS  144 (303)
T ss_pred             hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccc
Confidence            9999999999999999999999999999999999999999999999988766554443

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.99  E-value=2.6e-05  Score=67.26  Aligned_cols=120  Identities=17%  Similarity=0.245  Sum_probs=88.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHH
Q 026401           74 SRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFF  153 (239)
Q Consensus        74 ~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~  153 (239)
                      .++.+|.++++.|+++.+...+++|+...+.+ ....-                  .. ....+......|    +.|+.
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~------------------~~-~~~~~~l~~~~W----~~G~~   58 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLR------------------AG-SGGRSYLRRPLW----WIGLL   58 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccc------------------cc-chhhHHHhhHHH----HHHHH
Confidence            35679999999999999999999999776653 10000                  00 000000001122    22333


Q ss_pred             HHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          154 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      ...++..+...++...+++.++++..+.-++..+++..++||+++...+.|+++++.|..+...
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            4456667778899999999999999999999999999999999999999999999999887654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.95  E-value=2.5e-05  Score=58.10  Aligned_cols=69  Identities=14%  Similarity=0.214  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHhhcccCceEEeec-cchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccc
Q 026401          151 AFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       151 gi~~~~~~~~l~~~a~~~~~~~~~s~~-~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~  219 (239)
                      .+.+-.++++++.+++|+.+...+=.+ .-+--+.+.+.+++++||++++.+++|+++|+.|+.......
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            344567889999999999888766444 356778889999999999999999999999999998875544

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.79  E-value=6.9e-05  Score=54.94  Aligned_cols=68  Identities=15%  Similarity=0.192  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHhhcccCceEEeec-cchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccc
Q 026401          152 FFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       152 i~~~~~~~~l~~~a~~~~~~~~~s~~-~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~  219 (239)
                      +.+-.++++++..++|+.+...+=.. .-+--+.+.+.+++++||++++.+++|+++|+.|++.....+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33556788888888888877655333 445677789999999999999999999999999999875433

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.75  E-value=0.00049  Score=52.57  Aligned_cols=131  Identities=13%  Similarity=0.119  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHH
Q 026401           80 GLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFIT  159 (239)
Q Consensus        80 ~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~  159 (239)
                      .++++.+....++...+..|+.++..||..-+...+..+.+.+....++....  +........|+..+ -|+ .+.+.-
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHHH
Confidence            46788888889999999999998886699999999999999988888775543  11111111233322 444 455666


Q ss_pred             HHHHHhhcccCceEEeec-cchHHHHHHHHHHH----HhcCccchhhHHHHHHHHHhhhh
Q 026401          160 VVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFI----FLSEALHLGSVIGGVITCVGFYT  214 (239)
Q Consensus       160 ~l~~~a~~~~~~~~~s~~-~~l~Pv~a~l~~~~----~lgE~~~~~~~~G~~li~~gi~~  214 (239)
                      .+..+..++.|++.+... ..-|-+.+.+++.+    .-++++++.+++|.++++.|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            777888899998765544 44567777778775    34577899999999999999863

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.59  E-value=0.00027  Score=57.59  Aligned_cols=197  Identities=13%  Similarity=0.121  Sum_probs=133.9

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHH
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLL   83 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~   83 (239)
                      +++-+.++....+++|.|.+..      .....++-+.-.+.-.  -+|...            .. ......+.|.+.+
T Consensus       102 NltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~--w~D~q~------------~~-~~~~~lN~GY~Wm  160 (309)
T COG5070         102 NLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVAT--WGDQQA------------SA-FKAQILNPGYLWM  160 (309)
T ss_pred             cceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhc--cchhhH------------HH-HHhcccCCceEEE
Confidence            4555667777888999998888      7666665555443322  111110            00 0111334688888


Q ss_pred             HHHHHHHHHHHHHHHHHhh--hcCchHHHHHHHHHHHHHHHHHHHHhccCC-Cccccc-CCchhHHHHHHHHHHHHHHHH
Q 026401           84 LISNLLISVWYIIQTQTMK--LYPAEFVVTLLYCLFATIISAPICFVGESN-LSAWRL-KPDIELASIVYSAFFGLSFIT  159 (239)
Q Consensus        84 l~s~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~~gi~~~~~~~  159 (239)
                      ....+.-+.+....|+..+  +. .-...+++..+.+..+++.++++.+.. +.+... .+.....++...|+ ++..--
T Consensus       161 ~~NclssaafVL~mrkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiS  238 (309)
T COG5070         161 FTNCLSSAAFVLIMRKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGIS  238 (309)
T ss_pred             ehhhHhHHHHHHHHHHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhh
Confidence            8888888888887776432  22 346677888999988888888876642 211111 11123446667777 454555


Q ss_pred             HHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccc
Q 026401          160 VVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  223 (239)
Q Consensus       160 ~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~  223 (239)
                      ++-.|-+|-.+.+.-|++..+.-.-..+-|.+++||+.+...+....+-..+..++...|.+++
T Consensus       239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5777889999999999999999999999999999999999999998888877777776555433

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.57  E-value=3.7e-05  Score=56.60  Aligned_cols=41  Identities=29%  Similarity=0.461  Sum_probs=38.4

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhh
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL   48 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~   48 (239)
                      +.+++|+++.+++++++|||++++      ++.+++++++|++++..
T Consensus        66 i~~~~pi~~~ll~~~~~~er~~~~------~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   66 IFSLSPIFTALLSWLFFKERLSPR------RWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence            356899999999999999999999      99999999999999984

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.45  E-value=0.0011  Score=48.41  Aligned_cols=62  Identities=15%  Similarity=0.177  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHhhcccCceEE-eeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhh
Q 026401          154 GLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  215 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~-s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~  215 (239)
                      +..++|++...++|+.+...+ ++..-+--+.+.+.+++++||++++.+++|+++|+.|+...
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            557889999999999887554 44445667778889999999999999999999999999865

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.41  E-value=0.025  Score=49.67  Aligned_cols=197  Identities=14%  Similarity=0.131  Sum_probs=112.7

Q ss_pred             hHHHHHHHHHHhhhcce---eecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCC-CCCCCchHHHHH
Q 026401            6 TPGFTFILAIIFRMENL---ALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTP-QSTRSRWVIGGL   81 (239)
Q Consensus         6 ~P~~~~~la~~~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~l   81 (239)
                      +=+...++..++++|-.   +-.  ....-.+|+++.++|+.+... .+....         ...++ ...+.+...|.+
T Consensus       110 ~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~-Ag~~k~---------~~~~~~~~~~~~~~KGi~  177 (345)
T PRK13499        110 TLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGR-AGQLKE---------RKMGIKKAEEFNLKKGLI  177 (345)
T ss_pred             HHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHH-hhhhcc---------cccccccccccchHhHHH
Confidence            34556677777887654   221  122367899999999999873 111100         00000 023455678999


Q ss_pred             HHHHHHHHHHHHH-------HHHHHH-hhhcCchHHHHHHHHH---HHHHHH-HHHHHh---ccCCCc---ccccCCchh
Q 026401           82 LLLISNLLISVWY-------IIQTQT-MKLYPAEFVVTLLYCL---FATIIS-APICFV---GESNLS---AWRLKPDIE  143 (239)
Q Consensus        82 ~~l~s~~~~a~~~-------v~~k~~-~~~~~~~~~~~~~~~~---~~~i~~-~~~~~~---~~~~~~---~~~~~~~~~  143 (239)
                      +++++.+.++.|+       ...+.. ..+. ++.....-+..   .+++.. +.++..   ..++..   +.. .+...
T Consensus       178 ialisgi~~~~f~~~~~~~~~~~~~a~~~g~-~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~-~~~~~  255 (345)
T PRK13499        178 LAVMSGIFSACFSFAMDAGKPMHEAAAALGV-DPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS-LAKPL  255 (345)
T ss_pred             HHHHHHHHHHHHHHHHhhccchhhhhhhcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc-ccchh
Confidence            9999999999999       444321 1223 34433333333   443322 222332   111111   111 01011


Q ss_pred             HHH---H-HHHHHHHHHHHHHHHHHhhcccCceEEee---cc-chHHHHHHHHHHHHhcCccc------hhhHHHHHHHH
Q 026401          144 LAS---I-VYSAFFGLSFITVVHTFGLRMKGPVYTAI---FK-PLSIAIAAITSFIFLSEALH------LGSVIGGVITC  209 (239)
Q Consensus       144 ~~~---l-~~~gi~~~~~~~~l~~~a~~~~~~~~~s~---~~-~l~Pv~a~l~~~~~lgE~~~------~~~~~G~~li~  209 (239)
                      ++.   + +..|+ .=.+++.+|..+-++.|......   +. .+..+++.+++. ++||.=+      ...++|.++++
T Consensus       256 ~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI  333 (345)
T PRK13499        256 LITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVII  333 (345)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHH
Confidence            111   1 22233 45677788888888887655544   44 677799999998 5999866      56788999999


Q ss_pred             Hhhhhhhcc
Q 026401          210 VGFYTVLWG  218 (239)
Q Consensus       210 ~gi~~~~~~  218 (239)
                      +|..+....
T Consensus       334 ~g~~lig~~  342 (345)
T PRK13499        334 LAANIVGLG  342 (345)
T ss_pred             HHHHHHhhc
Confidence            999887654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.37  E-value=0.0027  Score=48.81  Aligned_cols=137  Identities=9%  Similarity=0.103  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSF  157 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~  157 (239)
                      +..++.+.+..+..+...+..|+.+...+|..-....+..|++.+..+.++.+..+ ++.......|| ...-|++ ..+
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW-~~~GG~l-Ga~   81 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWW-AWIGGLL-GAI   81 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchH-HHHccch-hhh
Confidence            56678889999999999999999888877999999999999999998888744322 22211111232 2222332 223


Q ss_pred             HHHHHHHhhcccCce-EEeeccchHHHHHHHHHHHHhc----CccchhhHHHHHHHHHhhhhhhc
Q 026401          158 ITVVHTFGLRMKGPV-YTAIFKPLSIAIAAITSFIFLS----EALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       158 ~~~l~~~a~~~~~~~-~~s~~~~l~Pv~a~l~~~~~lg----E~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      --..-.....+.|++ .+.....-|-+.+.+.+.+=+.    .+++...++|+.++++|+++..+
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            233344556676664 4555666677777887776444    56899999999999999655543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.34  E-value=0.0036  Score=52.91  Aligned_cols=81  Identities=10%  Similarity=0.080  Sum_probs=64.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccCceEEeecc-chHHHHHHHHHHHHhcCccchhhH----HHHHHHHHhhhhhhc
Q 026401          143 ELASIVYSAFFGLSFITVVHTFGLRMKGPVYTAIFK-PLSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTVLW  217 (239)
Q Consensus       143 ~~~~l~~~gi~~~~~~~~l~~~a~~~~~~~~~s~~~-~l~Pv~a~l~~~~~lgE~~~~~~~----~G~~li~~gi~~~~~  217 (239)
                      .++.-+..|+ .=.+++...+++.++.|.+++.++. -++-+.+.+++.+++||--+..++    ++.+++++|+++..+
T Consensus        44 ~~~~~~lsG~-~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   44 SFIVAFLSGA-FWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            4555556666 4569999999999999999999887 677788999999999998776554    377888899998887


Q ss_pred             ccccccc
Q 026401          218 GKANDEA  224 (239)
Q Consensus       218 ~~~~~~~  224 (239)
                      +++++++
T Consensus       123 ~~~~~~~  129 (269)
T PF06800_consen  123 QDKKSDK  129 (269)
T ss_pred             ccccccc
Confidence            6666554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.34  E-value=0.0016  Score=57.13  Aligned_cols=136  Identities=11%  Similarity=0.074  Sum_probs=89.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHH-----HHhccCCC-cccccCCchhHHHHH
Q 026401           75 RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPI-----CFVGESNL-SAWRLKPDIELASIV  148 (239)
Q Consensus        75 ~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~-~~~~~~~~~~~~~l~  148 (239)
                      +...|.++.++++++|+.+.+-.|+ .++.+  +... |.  .+.++..+.     +.+..++. +..+..+...+..-+
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~--v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS--VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH--HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence            3458999999999999999999988 55552  2222 22  222221111     11212221 122222233444444


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCceEEeec-cchHHHHHHHHHHHHhcCcc-------chhhHHHHHHHHHhhhhhhc
Q 026401          149 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEAL-------HLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       149 ~~gi~~~~~~~~l~~~a~~~~~~~~~s~~-~~l~Pv~a~l~~~~~lgE~~-------~~~~~~G~~li~~gi~~~~~  217 (239)
                      ..|+ .=.++...+..++|+.|.+....+ .-++-+.+.+++.+++||-.       ....++|.+++++|+++..+
T Consensus        78 l~G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         78 LFGA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            5555 356899999999999999877655 45788899999999998754       23466799999999999887

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.34  E-value=0.00059  Score=49.53  Aligned_cols=65  Identities=12%  Similarity=0.173  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHhhcccCceEE-eeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          152 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       152 i~~~~~~~~l~~~a~~~~~~~~~-s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      +.+-..+|++...++|+.+...+ ++..-+--+.+.+.+++++||++++.+++|+++++.|+....
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            33557888888888888877554 444456778889999999999999999999999999998764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.34  E-value=0.00082  Score=47.73  Aligned_cols=55  Identities=18%  Similarity=0.269  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHhhcccCceEE-eeccchHHHHHHHHHHHHhcCccchhhHHHHHHH
Q 026401          154 GLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVIT  208 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~-s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li  208 (239)
                      +-.++++++.+++|+.+.+.+ ++..-+..+...+.|.+++||++++.+++|+++|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            567889999999999998887 4455688899999999999999999999999886

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.29  E-value=0.00067  Score=58.07  Aligned_cols=198  Identities=18%  Similarity=0.189  Sum_probs=109.2

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCC-CCCCCCchHHHHH
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWT-PQSTRSRWVIGGL   81 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~l   81 (239)
                      ..++-+..++++..++|||++..      ..+|..+|+.|..+++. +.|.-+...+     ...- .--.+..+. ...
T Consensus        97 GAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP~e~~i~t-----~~el~~~~~~~~Fl-iy~  163 (335)
T KOG2922|consen   97 GALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAPKEQEIES-----VEEVWELATEPGFL-VYV  163 (335)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecCccccccc-----HHHHHHHhcCccHH-HHH
Confidence            35677889999999999999999      99999999999999994 4433221100     0000 000111111 111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHH-----HH--HhccCCCcccccCCchhHHHHHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAP-----IC--FVGESNLSAWRLKPDIELASIVYSAFFG  154 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~--~~~~~~~~~~~~~~~~~~~~l~~~gi~~  154 (239)
                      ...+..++.-++.+--|+.   ..+.+++.....+.|.....-     .+  ....+   ..+...+..|..++.... |
T Consensus       164 ~~iil~~~il~~~~~p~~g---~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g---~~ql~~~~ty~~~l~~~~-~  236 (335)
T KOG2922|consen  164 IIIILIVLILIFFYAPRYG---QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSG---NNQLFYPLTWIFLLVVAT-C  236 (335)
T ss_pred             HHHHHHHHHHheeeccccc---ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcC---CcccccHHHHHHHHHHHH-H
Confidence            1111111111111111111   112444444444443221110     00  01111   122223345666665555 6


Q ss_pred             HHHHHHHHHHhhcccCceEEeeccchH-HHHHHHHHHHHhcCccc--h----hhHHHHHHHHHhhhhhhcccc
Q 026401          155 LSFITVVHTFGLRMKGPVYTAIFKPLS-IAIAAITSFIFLSEALH--L----GSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       155 ~~~~~~l~~~a~~~~~~~~~s~~~~l~-Pv~a~l~~~~~lgE~~~--~----~~~~G~~li~~gi~~~~~~~~  220 (239)
                      ...+..-.|+|++..+++.++.+.+.. -.++++-|.++++|--.  .    ....|...++.|+.+....|.
T Consensus       237 ~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd  309 (335)
T KOG2922|consen  237 VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKD  309 (335)
T ss_pred             HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeecc
Confidence            778888999999999998888777654 44555667777776542  2    356799999999988754333

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.23  E-value=0.00078  Score=48.68  Aligned_cols=64  Identities=17%  Similarity=0.255  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHhhcccCceEE-eeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          154 GLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~-s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      +-.++|.+...++|+++...+ ++..-+-.+.+.+.+++++||++++.+++|.++++.|+.....
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            446778888888888776443 4555666777889999999999999999999999999987654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=96.89  E-value=0.00058  Score=50.11  Aligned_cols=40  Identities=30%  Similarity=0.518  Sum_probs=37.4

Q ss_pred             CCcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            2 IGNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         2 i~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      +.++.|+++.+++++++||+++++      +++|+++.+.|+.+++
T Consensus        86 ~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   86 LQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence            467899999999999999999999      9999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.86  E-value=0.0009  Score=49.15  Aligned_cols=38  Identities=13%  Similarity=0.182  Sum_probs=35.7

Q ss_pred             cchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            4 NLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         4 ~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      ++.|+++.+++++++|||++.+      |++|+++.++|++++.
T Consensus        71 ~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         71 SLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            4789999999999999999999      9999999999998875

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.83  E-value=0.003  Score=52.91  Aligned_cols=68  Identities=13%  Similarity=0.160  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccc
Q 026401          155 LSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  222 (239)
Q Consensus       155 ~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~  222 (239)
                      -.++-.+.+.++++.+|+...++..+..+++.+++++++|.+++..||.+..++++|+.++.......
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            45666788899999999999999999999999999999999999999999999999999987765554

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.62  E-value=0.008  Score=44.12  Aligned_cols=108  Identities=11%  Similarity=0.039  Sum_probs=74.0

Q ss_pred             HHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHh
Q 026401           86 SNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFG  165 (239)
Q Consensus        86 s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a  165 (239)
                      -++.|+..+.+.||..+... +..-.. +..-....     ++.     .|+        .  ...+.....+-..|++.
T Consensus         4 Vg~~WG~Tnpfik~g~~~~~-~~~~~~-~~~~~~~~-----Ll~-----n~~--------y--~ipf~lNq~GSv~f~~~   61 (113)
T PF10639_consen    4 VGILWGCTNPFIKRGSSGLE-KVKASL-QLLQEIKF-----LLL-----NPK--------Y--IIPFLLNQSGSVLFFLL   61 (113)
T ss_pred             ehHHhcCchHHHHHHHhhcC-CccchH-HHHHHHHH-----HHH-----hHH--------H--HHHHHHHHHHHHHHHHH
Confidence            35789999999999887763 222221 21111111     110     122        1  11222344566777888


Q ss_pred             hcccCceEEeec-cchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhh
Q 026401          166 LRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTV  215 (239)
Q Consensus       166 ~~~~~~~~~s~~-~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~  215 (239)
                      +.+.+-+.+.++ +.+.=+++++.++++.+|..+...++|+++++.|+.++
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999999998 49999999999988777778889999999999998764

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.47  E-value=0.0017  Score=53.75  Aligned_cols=136  Identities=15%  Similarity=0.105  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHH
Q 026401           79 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFI  158 (239)
Q Consensus        79 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~  158 (239)
                      ..+++++-++.|+..-....+.-.   +|..-+... .++++...+..++...+...++     .++.-+..|.+ =.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGt-T~GALifaiiv~~~~~p~~T~~-----~~iv~~isG~~-Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGT-TLGALIFAIIVFLFVSPELTLT-----IFIVGFISGAF-WSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhc-cHHHHHHHHHHheeecCccchh-----hHHHHHHhhhH-hhhh
Confidence            457888999999987766554322   233333333 3444444333333222111221     23333334443 3588


Q ss_pred             HHHHHHhhcccCceEEeeccc-hHHHHHHHHHHHHhcCccchhhH----HHHHHHHHhhhhhhcccccccc
Q 026401          159 TVVHTFGLRMKGPVYTAIFKP-LSIAIAAITSFIFLSEALHLGSV----IGGVITCVGFYTVLWGKANDEA  224 (239)
Q Consensus       159 ~~l~~~a~~~~~~~~~s~~~~-l~Pv~a~l~~~~~lgE~~~~~~~----~G~~li~~gi~~~~~~~~~~~~  224 (239)
                      +...+++++..|.+++.+++. .+-|-+.+++.+.+||-.+..++    +.++++++|+++..+++|.+++
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            999999999999999988765 78888999999999999988765    3667788999888776654333

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=95.79  E-value=0.0062  Score=52.82  Aligned_cols=122  Identities=11%  Similarity=0.127  Sum_probs=88.9

Q ss_pred             HHHHHHHHhh--hcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 026401           93 WYIIQTQTMK--LYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGLRMKG  170 (239)
Q Consensus        93 ~~v~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~~~~~  170 (239)
                      .++..|+..+  +.+-|..++......+.+..+..-.+...+..  +..+...+..++-+++ ...++..+-+.++++.+
T Consensus        32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~--~~~~~~~~~~llpl~~-~~~~~~v~~n~Sl~~v~  108 (316)
T KOG1441|consen   32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS--KISSKLPLRTLLPLGL-VFCISHVLGNVSLSYVP  108 (316)
T ss_pred             eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC--ccccccchHHHHHHHH-HHHHHHHhcchhhhccc
Confidence            3446777777  55668888888766666666555443222221  1112335667788888 45688999999999999


Q ss_pred             ceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          171 PVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       171 ~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      .+..-..-.++|++++++++++.+|+.+...+.-+..++.|+.+..+
T Consensus       109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~  155 (316)
T KOG1441|consen  109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASV  155 (316)
T ss_pred             hhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeee
Confidence            99999999999999999999999999988776666666666665544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.64  E-value=0.45  Score=41.59  Aligned_cols=145  Identities=14%  Similarity=0.050  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcC---chHHHHHHHHHHHHHHHHHHHHhcc-----CC---CcccccCCchhHHH
Q 026401           78 IGGLLLLISNLLISVWYIIQTQTMKLYP---AEFVVTLLYCLFATIISAPICFVGE-----SN---LSAWRLKPDIELAS  146 (239)
Q Consensus        78 ~G~l~~l~s~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~-----~~---~~~~~~~~~~~~~~  146 (239)
                      .-.+.+++..+-++......|...++..   .|-+..+..=+.-.+++....+.-+     ..   .+.+-...+.+...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            3445555556667777777666544431   2344444433444444444444321     11   11100001111111


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccccc
Q 026401          147 IVYSAFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKANDE  223 (239)
Q Consensus       147 l~~~gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~~  223 (239)
                      +..=.+ .-.+.-.+++.+..+.+|++..+...+....+.+++.++++++++..||...++...|+.++.....+..
T Consensus        95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~  170 (345)
T KOG2234|consen   95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT  170 (345)
T ss_pred             HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            111111 2345556888999999999999999999999999999999999999999999999999999985444433

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.57  E-value=0.068  Score=44.96  Aligned_cols=126  Identities=10%  Similarity=0.079  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCC-cccccCCchhHHH-----HHHHHH
Q 026401           79 GGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNL-SAWRLKPDIELAS-----IVYSAF  152 (239)
Q Consensus        79 G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~-----l~~~gi  152 (239)
                      |.+.+++|+++++...+=.||....  |++.+..+++....+..+...+..+.+. ..|.......|..     +-..--
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p~f~p~amlgG~lW~~gN~~~vpii~~   78 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFPPFYPWAMLGGALWATGNILVVPIIKT   78 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCCcceeHHHhhhhhhhcCceeehhHhhh
Confidence            3467788899999888888876544  6888777777666666665555433211 1121111111100     001111


Q ss_pred             HHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHH-HhcCcc-----chhhHHHHHHHHHhhhhhhccccc
Q 026401          153 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFI-FLSEAL-----HLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       153 ~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~-~lgE~~-----~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ++-++++.+|.               ...-+.+-..+-+ ++|++.     ++..++|++++++|..+...-|.+
T Consensus        79 iGLglg~liW~---------------s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   79 IGLGLGMLIWG---------------SVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             hhhHHHHHHHH---------------HHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            12234444442               2233334333322 344332     567899999999998887654443

The region concerned is approximately 280 residues long.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.35  E-value=0.0071  Score=51.91  Aligned_cols=125  Identities=18%  Similarity=0.271  Sum_probs=94.7

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHH
Q 026401           73 RSRWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAF  152 (239)
Q Consensus        73 ~~~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi  152 (239)
                      ..++.+|.++++.|.++.+...++.|+..++.. .   .              ..-...+  .....    --..-|.|+
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~--------------~~ra~~g--g~~yl----~~~~Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---S--------------GLRAGEG--GYGYL----KEPLWWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---h--------------cccccCC--Ccchh----hhHHHHHHH
Confidence            445678999999999999999999998776652 1   0              1000011  11110    113445666


Q ss_pred             HHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          153 FGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       153 ~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      +..++|-...+.+....+++.++++..+..++..+++..+++|++++...+|+++.++|-.+...-.++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~  140 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPK  140 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCc
Confidence            777788888888889999999999999999999999999999999999999999999998876554433

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.68  E-value=0.016  Score=46.51  Aligned_cols=64  Identities=9%  Similarity=0.112  Sum_probs=58.4

Q ss_pred             HHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          157 FITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       157 ~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      .+-++|..++++++|+.++.+......+..+++++++|+++....++.+++-+.|+++..+...
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            4567888999999999999999999999999999999999999999999999999998876543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.21  E-value=0.044  Score=48.11  Aligned_cols=66  Identities=17%  Similarity=0.225  Sum_probs=61.4

Q ss_pred             HHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          156 SFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       156 ~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      ..+.+.++.+++...++...++....-+|+..++..+.+|++++.+.++..+-+.|++++...+.+
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~  235 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK  235 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc
Confidence            578889999999999999999999999999999999999999999999999999999998876544

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.64  E-value=0.0067  Score=50.28  Aligned_cols=184  Identities=14%  Similarity=0.090  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhhhcCCccccCCCCCCccCCCCCCCCCCchHHHHHHHHHH
Q 026401            7 PGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVLYKGPTIMSTASIPAQSLHWTPQSTRSRWVIGGLLLLIS   86 (239)
Q Consensus         7 P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~l~s   86 (239)
                      -+-+-+++.+.++|..+..+.--  -.+++++.+.|+.+-.. +.++           ++  ..++..+.-.|...++.|
T Consensus        97 LVg~sL~gV~~f~EW~t~~~~Il--G~iAliliviG~~lTs~-~~~~-----------nk--~~~~~~n~kkgi~~L~iS  160 (288)
T COG4975          97 LVGTSLFGVFVFHEWTTPTQIIL--GFIALILIVIGIYLTSK-QDRN-----------NK--EEENPSNLKKGIVILLIS  160 (288)
T ss_pred             HhhceeeeEEEEeccCcchhHHH--HHHHHHHHHHhheEeee-eccc-----------cc--cccChHhhhhheeeeeee
Confidence            34456677788888876651000  12345555666655442 1100           00  112233455789999999


Q ss_pred             HHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 026401           87 NLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITVVHTFGL  166 (239)
Q Consensus        87 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~l~~~a~  166 (239)
                      .++|-.|.++.+...-+--+.+.....-+..+++.   +..... +.  .   ..+..+.-+..|+ .=+++-..+..+.
T Consensus       161 t~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali---~~~~~~-~~--~---~~K~t~~nii~G~-~Wa~GNl~ml~a~  230 (288)
T COG4975         161 TLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALI---LGFFKM-EK--R---FNKYTWLNIIPGL-IWAIGNLFMLLAA  230 (288)
T ss_pred             ccceeeeEeeeccccccchhhhhHHHHHHHHHHHH---Hhhccc-cc--c---hHHHHHHHHhhHH-HHHhhHHHHHHhh
Confidence            99999999988865421112333333344444433   232211 11  1   1122223333444 3456777788888


Q ss_pred             cccCceEEeeccchHHHHHHHHHHHHhcCccchhh----HHHHHHHHHhhhhhh
Q 026401          167 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGS----VIGGVITCVGFYTVL  216 (239)
Q Consensus       167 ~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~----~~G~~li~~gi~~~~  216 (239)
                      ++.|..+.=-++.+-.+.+.+-+.++++|+=+..+    ++|.+++++|..+..
T Consensus       231 ~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         231 QKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             hhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            88888777777888889999999999999987754    468888888876654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=92.92  E-value=0.089  Score=39.10  Aligned_cols=36  Identities=28%  Similarity=0.385  Sum_probs=32.2

Q ss_pred             hHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            6 TPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         6 ~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      .-+.+.++++++++|++++.      +++|+.+.++|++.+-
T Consensus        67 G~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         67 GILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence            34567889999999999999      9999999999998876

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=92.79  E-value=0.096  Score=37.90  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            7 PGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         7 P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      -+.+.+.++++++|+++..      |++|+.+.++|++.+-
T Consensus        68 ~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          68 IVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence            4567889999999999999      9999999999998865

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=92.73  E-value=0.092  Score=39.56  Aligned_cols=37  Identities=22%  Similarity=0.433  Sum_probs=30.0

Q ss_pred             chHHHHHHHHHH--hhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            5 LTPGFTFILAII--FRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         5 ~~P~~~~~la~~--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      ..+.++.+.++.  +++|+++.+      +++|+++.++|+.++.
T Consensus        83 l~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~  121 (129)
T PRK02971         83 LSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence            344455555553  899999999      9999999999999977

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=92.64  E-value=0.11  Score=38.10  Aligned_cols=35  Identities=23%  Similarity=0.329  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            7 PGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         7 P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      -+.+.+++++++||++++.      +++|+.+.++|++.+-
T Consensus        68 ~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         68 IVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            3557889999999999999      9999999999999976

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=92.34  E-value=0.12  Score=37.79  Aligned_cols=34  Identities=18%  Similarity=0.236  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhh
Q 026401            7 PGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV   46 (239)
Q Consensus         7 P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll   46 (239)
                      -+.+.+++++++||++++.      |++|+.+.+.|++.+
T Consensus        73 ~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l  106 (109)
T PRK10650         73 IAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence            3567789999999999999      999999999999875

>PRK11431 multidrug efflux system protein; Provisional

Probab=92.08  E-value=0.13  Score=37.25  Aligned_cols=35  Identities=14%  Similarity=0.141  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            7 PGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         7 P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      -+.+.+++++++||++++.      +++|+.+.+.|++.+-
T Consensus        67 ~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         67 AVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence            4567889999999999999      9999999999998864

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=91.34  E-value=0.73  Score=38.28  Aligned_cols=134  Identities=10%  Similarity=0.048  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhh-cC------c----hHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHH
Q 026401           82 LLLISNLLISVWYIIQTQTMKL-YP------A----EFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYS  150 (239)
Q Consensus        82 ~~l~s~~~~a~~~v~~k~~~~~-~~------~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  150 (239)
                      ++.+--+||-.|.+.+.|..+. +.      +    ...+.++++....+..=++..+....-.+..    ..+ ..+..
T Consensus        17 ca~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t----~~~-~YaAc   91 (337)
T KOG1580|consen   17 CAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNT----PTK-MYAAC   91 (337)
T ss_pred             EecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCC----cch-HHHHH
Confidence            4444457888999998887653 21      0    2344455555555443322222111101111    122 22222


Q ss_pred             HHHHHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccccc
Q 026401          151 AFFGLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAN  221 (239)
Q Consensus       151 gi~~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~  221 (239)
                      .. +-.++...-|.++|..+=-+.-+--+..|+=..+++.++.+..-+|..+.-..+|+.|+.+..++.+|
T Consensus        92 s~-sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   92 SA-SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             HH-HHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            22 45667777788888887555556678888889999999999999999999999999999998886444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.23  E-value=4  Score=35.26  Aligned_cols=126  Identities=14%  Similarity=0.090  Sum_probs=84.6

Q ss_pred             HHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHhccCCCcc-cccCC-chhHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 026401           94 YIIQTQTMKLYPAEFVVTLLYCLFATIISAPICFVGESNLSA-WRLKP-DIELASIVYSAFFGLSFITVVHTFGLRMKGP  171 (239)
Q Consensus        94 ~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~-~~~~~~l~~~gi~~~~~~~~l~~~a~~~~~~  171 (239)
                      +.+.|...++++=|..++.+++..-.......-...+..... ...-+ ....-.++-.++ ++++=-.+-|+++++.+.
T Consensus        32 tf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtl  110 (349)
T KOG1443|consen   32 TFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTL  110 (349)
T ss_pred             HHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeee
Confidence            345566666665567777666554433332222221111111 10000 011223334555 778888899999999999


Q ss_pred             eEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          172 VYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       172 ~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      +.-.+.-+..++|..++|.++-=|++++....=..+|-+|+++..++..
T Consensus       111 SlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT  159 (349)
T KOG1443|consen  111 SLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST  159 (349)
T ss_pred             eeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence            9999999999999999999888899999999999999999998877644

>PRK02237 hypothetical protein; Provisional

Probab=90.11  E-value=0.48  Score=34.25  Aligned_cols=43  Identities=14%  Similarity=0.139  Sum_probs=36.0

Q ss_pred             cchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          178 KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       178 ~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      .-...+.++++.+.+-|++++.+.++|..+.++|+.+..+..|
T Consensus        66 GGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         66 GGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             hhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            3344567889999999999999999999999999988766544

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=89.56  E-value=0.43  Score=34.41  Aligned_cols=41  Identities=17%  Similarity=0.186  Sum_probs=35.6

Q ss_pred             hHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          180 LSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       180 l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      ...+.+.++++.+-|++|+.+.++|..+.++|+.+..+..|
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            34567889999999999999999999999999998877554

; GO: 0016020 membrane

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=87.85  E-value=3  Score=36.55  Aligned_cols=140  Identities=13%  Similarity=0.140  Sum_probs=78.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHH--HhccCCC-cccccCCchhHHHHHHHH
Q 026401           75 RWVIGGLLLLISNLLISVWYIIQTQTMKLYPAEFVVTLLYCLFATIISAPIC--FVGESNL-SAWRLKPDIELASIVYSA  151 (239)
Q Consensus        75 ~~~~G~l~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~-~~~~~~~~~~~~~l~~~g  151 (239)
                      ...+|.++..+++++-+.+.+=.||. |+.+ =..+=..+.+++- ...|..  ++..++. +-....+...+....+.|
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G   80 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG   80 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence            35689999999999999999888875 5653 2333333333332 223332  2322222 112222223444444444


Q ss_pred             HHHHHHHHHHHHHhhcccCceEE-eeccchHHHHHHHHHHHHhcC-------ccchhhHHHHHHHHHhhhhhhcc
Q 026401          152 FFGLSFITVVHTFGLRMKGPVYT-AIFKPLSIAIAAITSFIFLSE-------ALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       152 i~~~~~~~~l~~~a~~~~~~~~~-s~~~~l~Pv~a~l~~~~~lgE-------~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      ++ =+++-..|=.++|+.|.+.. ++..-+.-+++.++--++.|+       +-....++|.++.++|+.++-+.
T Consensus        81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            42 34555666678888886543 333334444455544344332       22346778999999999998764

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=87.14  E-value=0.8  Score=32.96  Aligned_cols=31  Identities=19%  Similarity=0.202  Sum_probs=26.5

Q ss_pred             HHHHHHHhcCccchhhHHHHHHHHHhhhhhh
Q 026401          186 AITSFIFLSEALHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       186 ~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~  216 (239)
                      +.++.+++||++++....|.++++.+++++.
T Consensus        77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            4567789999999999999999999887653

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.92  E-value=1.6  Score=31.00  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=29.3

Q ss_pred             HHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          184 IAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       184 ~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      +-+.+|.+.++|++.+..+.|..++..|+++..+
T Consensus        82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr  115 (116)
T COG3169          82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR  115 (116)
T ss_pred             HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence            3355788999999999999999999999988754

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.63  E-value=14  Score=32.02  Aligned_cols=117  Identities=14%  Similarity=0.160  Sum_probs=79.5

Q ss_pred             HHHHHHHHhhhcCchHHHHH--HHHHHHHHHHHHHHHhcc--CCCcccccCCchhH--HHHHHHHHHHHHHHHHHHHHhh
Q 026401           93 WYIIQTQTMKLYPAEFVVTL--LYCLFATIISAPICFVGE--SNLSAWRLKPDIEL--ASIVYSAFFGLSFITVVHTFGL  166 (239)
Q Consensus        93 ~~v~~k~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~--~~l~~~gi~~~~~~~~l~~~a~  166 (239)
                      -.+..|....+++-|..+..  +|++.+.+.+...-....  .++.++..  ...|  ..+++.+-+-++      .+++
T Consensus        27 m~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~--~kk~~P~~~lf~~~i~t~------~~sl   98 (314)
T KOG1444|consen   27 MTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRT--AKKWFPVSLLFVGMLFTG------SKSL   98 (314)
T ss_pred             HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHH--HHHHccHHHHHHHHHHHc------cccc
Confidence            34456666666654455544  899988887776654321  12222322  1222  234444332221      2578


Q ss_pred             cccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhc
Q 026401          167 RMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLW  217 (239)
Q Consensus       167 ~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~  217 (239)
                      |+.+.....++-...|+...+...+++|.+++...+.....+.+|......
T Consensus        99 k~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~  149 (314)
T KOG1444|consen   99 KYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF  149 (314)
T ss_pred             cccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999988876543

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=84.58  E-value=2.4  Score=30.64  Aligned_cols=57  Identities=16%  Similarity=0.167  Sum_probs=43.5

Q ss_pred             HHHHHHhhcccCceEEeecc-chHHHHHHHHHHHHhcCc-cchhhHHHHHHHHHhhhhhh
Q 026401          159 TVVHTFGLRMKGPVYTAIFK-PLSIAIAAITSFIFLSEA-LHLGSVIGGVITCVGFYTVL  216 (239)
Q Consensus       159 ~~l~~~a~~~~~~~~~s~~~-~l~Pv~a~l~~~~~lgE~-~~~~~~~G~~li~~gi~~~~  216 (239)
                      -.+|+..+++.+-+.+..+. .+.-.++.+.+.. +||. ..-..++|..++++|+.++.
T Consensus        66 Saly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccceeehhhhHHhhhhhhee
Confidence            35677778898888777665 5577888999986 5555 55567789999999998764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=83.28  E-value=0.71  Score=33.91  Aligned_cols=38  Identities=18%  Similarity=0.262  Sum_probs=32.6

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhh
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLV   46 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll   46 (239)
                      ++++=++|++.++++.+|..+++      +++|+.+.+.|+.+.
T Consensus        75 Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   75 NSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence            35667889999988888888999      999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=83.02  E-value=25  Score=30.46  Aligned_cols=128  Identities=10%  Similarity=0.058  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHhhh--------cCchHHHHHHHHHHHHHHHHHHHHhccCCCcccccCCchhHHHHHHHHHHHHHHHHH
Q 026401           89 LISVWYIIQTQTMKL--------YPAEFVVTLLYCLFATIISAPICFVGESNLSAWRLKPDIELASIVYSAFFGLSFITV  160 (239)
Q Consensus        89 ~~a~~~v~~k~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~  160 (239)
                      .+-.+.+++.++.++        ..++..+.+.+.+.+.+......-.  ....   ......|+...+.++ ...++-.
T Consensus        25 t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~--~k~~---~~~~apl~~y~~is~-tn~~s~~   98 (327)
T KOG1581|consen   25 TFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKW--WKKE---LSGVAPLYKYSLISF-TNTLSSW   98 (327)
T ss_pred             HHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhc--cccc---CCCCCchhHHhHHHH-HhhcchH
Confidence            344555666655422        2356777777777776665332221  1111   112224556666666 5567888


Q ss_pred             HHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccccc
Q 026401          161 VHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKAND  222 (239)
Q Consensus       161 l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~~~  222 (239)
                      +-+.++|+.+=-+-.+--..--+-..+++.++++.+.+...++-+.+|-.|+.+....+.++
T Consensus        99 ~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~  160 (327)
T KOG1581|consen   99 CGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD  160 (327)
T ss_pred             HHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence            88899999854333344444555567899999999999999999999999999887765554

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=81.73  E-value=1.2  Score=37.94  Aligned_cols=65  Identities=14%  Similarity=0.107  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHhhcccCceEEeeccchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcc
Q 026401          154 GLSFITVVHTFGLRMKGPVYTAIFKPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWG  218 (239)
Q Consensus       154 ~~~~~~~l~~~a~~~~~~~~~s~~~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~  218 (239)
                      |-..+-.+.+.++..+.++..-++--...+|..+++.-+++.+++..+|+|+..+..|++++-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            34445556666666666666666666678999999999999999999999999999999987543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=81.20  E-value=1.3  Score=31.20  Aligned_cols=28  Identities=29%  Similarity=0.269  Sum_probs=16.2

Q ss_pred             chHHHHHHHHHHhhhcceeecccccchhhhhHHh
Q 026401            5 LTPGFTFILAIIFRMENLALSSLSTWAKIIGTLV   38 (239)
Q Consensus         5 ~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l   38 (239)
                      +..+.+.+++.++++|+++.+      |+.|+.+
T Consensus        65 ~g~v~~~~~~~~~f~E~~s~~------~~~gi~l   92 (93)
T PF00893_consen   65 LGIVGVTLVGVFFFGESLSLS------KWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence            455678899999999999999      9998865

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	239
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.23
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.82
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.64
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.63

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.23  E-value=6.2e-12  Score=94.78  Aligned_cols=72  Identities=14%  Similarity=0.175  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCceEEeec-cchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhcccc
Q 026401          149 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGKA  220 (239)
Q Consensus       149 ~~gi~~~~~~~~l~~~a~~~~~~~~~s~~-~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~~  220 (239)
                      .++++++.++|++|++++|+.+++++..+ ..+.|+++++++++++||++++.+++|+++|+.|+++....++
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            35666889999999999999999999998 8999999999999999999999999999999999999876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.82  E-value=6.1e-09  Score=75.53  Aligned_cols=71  Identities=14%  Similarity=0.180  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcccCceEEeec-cchHHHHHHHHHHHHhcCccchhhHHHHHHHHHhhhhhhccc
Q 026401          149 YSAFFGLSFITVVHTFGLRMKGPVYTAIF-KPLSIAIAAITSFIFLSEALHLGSVIGGVITCVGFYTVLWGK  219 (239)
Q Consensus       149 ~~gi~~~~~~~~l~~~a~~~~~~~~~s~~-~~l~Pv~a~l~~~~~lgE~~~~~~~~G~~li~~gi~~~~~~~  219 (239)
                      ..++++..++|.++.+++|+.+.+.+..+ ..+.|+++.+.+++++||++++.+++|+++|+.|++.....+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35556788999999999999999999888 899999999999999999999999999999999999876543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.64  E-value=0.001  Score=47.73  Aligned_cols=39  Identities=21%  Similarity=0.317  Sum_probs=36.9

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhh
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVV   47 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~   47 (239)
                      .++.|+++++++++++||+++++      +++|+++.++|+.++.
T Consensus        64 ~g~~~v~~~l~~~~~~~E~~s~~------~~~Gi~lIi~Gv~~l~  102 (110)
T 3b5d_A           64 SGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIIN  102 (110)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence            46789999999999999999999      9999999999999887

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.63  E-value=0.001  Score=49.70  Aligned_cols=40  Identities=23%  Similarity=0.342  Sum_probs=31.4

Q ss_pred             CcchHHHHHHHHHHhhhcceeecccccchhhhhHHhhhhhhhhhhh
Q 026401            3 GNLTPGFTFILAIIFRMENLALSSLSTWAKIIGTLVSVSGAMLVVL   48 (239)
Q Consensus         3 ~~~~P~~~~~la~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ll~~   48 (239)
                      .++.|++++++++++++|++++.      +++|+++.++|++++..
T Consensus        64 ~~l~pv~~~l~g~l~lgE~ls~~------~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           64 SGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLIINL  103 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence            46789999999999999999999      99999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00