Citrus Sinensis ID: 026443

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Secondary Structure (PSIPRED)
ccccccccccHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MAMSEQTVTAIKSYQNQAQVLVKNyiiadpfipyTSILAGLLACKVVYDLTQLISTFYFKAYNgltkiqrmewnnrgiSTVHAIFITALSLYYVFWSdlfsdqqhtgpitfrsswlsnfglgvsVGYFLADLGMIFWLypslggmeyVVHHSLSGIAVAYSMFSGEGQLYTYMVLISevttpeinmRWYLdtagmkrstTYLVNGVIIFFAWLIARILLFVYMFYHVYLhydqvipsi
Flexible Loop (DISEMBL)
MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Low Complexity Region (SEG)
MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Disordered region (IsUnstruct)
*********AIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI***
Disordered Region (DISOPRED)
***********KSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Disordered Region (DISEMBL)
*********AIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Disordered Region (DISPRO)
****EQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q6PGS5	262	Transmembrane protein 56-	N/A	no	0.659	0.599	0.293	7e-14
Q8CGF5	276	Transmembrane protein 56	yes	no	0.697	0.601	0.244	1e-12
Q5XIY2	264	Transmembrane protein 56-	no	no	0.684	0.617	0.266	1e-11
Q6GLX2	258	Transmembrane protein 56-	N/A	no	0.773	0.713	0.256	3e-11
Q96MV1	263	Transmembrane protein 56	yes	no	0.638	0.577	0.259	4e-11
Q6P4N1	259	Transmembrane protein 56	no	no	0.764	0.702	0.253	9e-11
Q550S9	257	Transmembrane protein 56	yes	no	0.726	0.673	0.260	2e-10
Q550T0	258	Transmembrane protein 56	no	no	0.634	0.585	0.246	3e-06
Q1LXV8	242	Transmembrane protein 136	no	no	0.491	0.483	0.314	1e-05
Q0VD42	245	Transmembrane protein 136	no	no	0.563	0.546	0.297	1e-05

>sp|Q6PGS5|TM56B_XENLA Transmembrane protein 56-B OS=Xenopus laevis GN=tmem56-b PE=2 SV=1

 Score = 77.4 bits (189), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 90/167 (53%), Gaps = 10/167 (5%)

Query: 54  ISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRS 113
           +ST     ++ L+  Q++EWN+R +S+ HA+ +    LY +    ++ D  +  P+ +  
Sbjct: 30  LSTRLTGGFHKLSARQKIEWNSRTVSSFHALVVGCFCLYIL----VYDDAVNADPV-WGD 84

Query: 114 SWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQL--YT 171
            ++    + V+ GY ++DL +I + +  +G   +V HH  +  A  Y +  GEG L  + 
Sbjct: 85  PFMVKLNVAVTSGYLISDLLLIIYYWKEIGDKYFVTHHLAALYACYYVL--GEGMLPYFG 142

Query: 172 YMVLISEVTTPEINMRWYLDTAG-MKRSTTYLVNGVIIFFAWLIARI 217
              LI+E +TP +N RW+ +  G  K S   +VNGV++  ++ I RI
Sbjct: 143 NFRLIAEFSTPFVNQRWFFEVLGYSKYSLPNMVNGVLMTISFFIVRI 189

Xenopus laevis (taxid: 8355)

>sp|Q8CGF5|TMM56_MOUSE Transmembrane protein 56 OS=Mus musculus GN=Tmem56 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 89/172 (51%), Gaps = 6/172 (3%)

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
            YN L+  +++EWN+R +ST H++ +    LY  F    F +   T P+    +++ N  
Sbjct: 50  GYNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFF----FDEATITDPLWGDPTYV-NIN 104

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           +  + GY ++DL +I + +  +G   +++HH     A  + + +G         L++E++
Sbjct: 105 IATASGYLISDLLIILFNWKVIGDKFFIIHHCAGLTAYYFVLTTGALAYIANFRLLAELS 164

Query: 181 TPEINMRWYLDTAGMKR-STTYLVNGVIIFFAWLIARILLFVYMFYHVYLHY 231
           +P +N RW+ +     + S   ++NG+++   + I RI+    M++ +Y  Y
Sbjct: 165 SPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRIISIPPMYFFLYSVY 216

Mus musculus (taxid: 10090)

>sp|Q5XIY2|TM56B_DANRE Transmembrane protein 56-B OS=Danio rerio GN=tmem56b PE=2 SV=1

 Score = 70.1 bits (170), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)

Query: 50  LTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPI 109
           ++ ++S+ + + Y  L   +  +WN+R +STVHA+ I  L   Y+ W D   D  +  P+
Sbjct: 23  VSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHAL-IVGLFCLYILWYD---DAVNEDPV 78

Query: 110 TFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQL 169
            +    L    + ++ GY   DL ++   + ++G + +V HH  +  A  Y +  G    
Sbjct: 79  -WGDPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAALYAYGYVLTRGVLPY 137

Query: 170 YTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLV-NGVIIFFAWLIARI 217
           +    LISE++TP +N RW+ +     R+   +V NG+ +   + + RI
Sbjct: 138 FANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFLVRI 186

Danio rerio (taxid: 7955)

>sp|Q6GLX2|TM56A_XENLA Transmembrane protein 56-A OS=Xenopus laevis GN=tmem56-a PE=2 SV=1

 Score = 68.9 bits (167), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)

Query: 29  DPFIPYTSILAGLLACKVVYD-LTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFIT 87
           D  I Y  +    L  ++++  ++  + T Y   Y  L+  ++ EW++R +ST HA+ + 
Sbjct: 3   DVLISYCVVTGSFLGFQLLFSAISPRLFTKYSSTYRQLSFGKQCEWDSRFVSTNHALIVG 62

Query: 88  ALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEY 147
           +  LY +     + D  +  PI     W+    + ++ GY + DL ++   +  +     
Sbjct: 63  SACLYIL----AYDDAVNADPIWGDPFWV-KMNVAITCGYLVQDLLLLARFWKVMRDPYM 117

Query: 148 VVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRST-TYLVNGV 206
           V HH     +  Y +  G    +    LISE++TP +N RW+ D  G  RS+   L+NG+
Sbjct: 118 VCHHLAVFYSYGYVLNRGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSWPVLLNGL 177

Query: 207 IIFFAWLIARI 217
            +   + I RI
Sbjct: 178 AMALVFFIVRI 188

Xenopus laevis (taxid: 8355)

>sp|Q96MV1|TMM56_HUMAN Transmembrane protein 56 OS=Homo sapiens GN=TMEM56 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 83/158 (52%), Gaps = 6/158 (3%)

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
            +N L+  +++EWN+R +ST H++ +    L Y+F   LF +     P+    S L+N  
Sbjct: 37  GFNSLSFKKKIEWNSRVVSTCHSLVVGIFGL-YIF---LFDEATKADPLWGGPS-LANVN 91

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           + ++ GY ++DL +I   +  +G   +++HH  S  A    + +G         L++E++
Sbjct: 92  IAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKNGVLAYIGNFRLLAELS 151

Query: 181 TPEINMRWYLDTAGMKR-STTYLVNGVIIFFAWLIARI 217
           +P +N RW+ +     + S   ++NG+++   + I RI
Sbjct: 152 SPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRI 189

Homo sapiens (taxid: 9606)

>sp|Q6P4N1|TMM56_XENTR Transmembrane protein 56 OS=Xenopus tropicalis GN=tmem56 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 7/189 (3%)

Query: 31  FIPYTSILAGLLACKVVYDLTQLIS-TFYFKAYNGLTKIQRMEWNNRGISTVHAIFITAL 89
           FI Y  +    L  ++++ +    + T Y   Y  L+  ++ EW++R +ST HA+ + + 
Sbjct: 6   FISYCVVTGSFLGFQLLFSIISPRTFTKYSSTYRQLSFGKQCEWDSRCVSTTHALVVGSG 65

Query: 90  SLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVV 149
            LY +     + +  +  PI     W+    + ++ GY + DL ++   +  +     V 
Sbjct: 66  CLYIL----AYDEAVNADPIWGDPFWV-KMNVAITCGYLVHDLLLLARFWKVMRDPYMVC 120

Query: 150 HHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRST-TYLVNGVII 208
           HH     +  Y +  G    +    LISE++TP +N RW+ D  G  RS+   L+NG+ +
Sbjct: 121 HHLAVFYSYGYVLNRGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSWPVLLNGLAM 180

Query: 209 FFAWLIARI 217
              + I RI
Sbjct: 181 ALVFFIVRI 189

Xenopus tropicalis (taxid: 8364)

>sp|Q550S9|TM56B_DICDI Transmembrane protein 56 homolog B OS=Dictyostelium discoideum GN=tmem56b PE=3 SV=1

 Score = 66.2 bits (160), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 100/188 (53%), Gaps = 15/188 (7%)

Query: 37  ILAGLLACKVVYD-----LTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSL 91
           IL   L C +++      L ++I   + K   G  + +R+EW NR ISTV+AI  +ALS+
Sbjct: 8   ILYQDLPCFLLFTSLHLFLPKIIEIIFKKNNIGFYERKRIEWPNRIISTVNAIVTSALSI 67

Query: 92  YYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHH 151
           Y +++++   +   +      +S +S F       YF+ D  +  +    L     ++HH
Sbjct: 68  YCLYYNEWIVNSLRS------TSEMSYFIFKFITYYFIYDFIISSYYSKYLFTWGNLLHH 121

Query: 152 SLSGIAVAYSMFSGEGQLYTYMV--LISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIF 209
           +++   ++++   G+G  +  ++    +E+TTP IN+R++L    +K    Y++NG++IF
Sbjct: 122 TIA--LLSFTFLGGKGLAHHLLLSYTFTEITTPLINLRFFLLDLNLKNHPLYVINGLLIF 179

Query: 210 FAWLIARI 217
             +++ R+
Sbjct: 180 VGFVLFRV 187

Dictyostelium discoideum (taxid: 44689)

>sp|Q550T0|TM56A_DICDI Transmembrane protein 56 homolog A OS=Dictyostelium discoideum GN=tmem56a PE=3 SV=1

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 50  LTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPI 109
           +  L+ T +      L+   ++EW N+ ++T+ +I   +LS Y ++    +   + T   
Sbjct: 28  IPSLLQTIFNNNEKQLSYSSKIEWTNKIVATISSIVSFSLSCYCIYNKKSWVTNEMTS-- 85

Query: 110 TFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIA--VAYSMFSGEG 167
              +  LS+F L     YFL D   +   Y  L     ++HH + GI   V   ++  + 
Sbjct: 86  ---TCALSDFILKFISFYFLFDALHLIIYYKQLFDWPIIIHHLVVGILSYVYIGLYYKKV 142

Query: 168 QLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNG 205
            L     L+ E+T P I+M+W+L    ++    Y +NG
Sbjct: 143 HLTLLYFLLFEITNPFIHMKWFLKDLKLENHILYSING 180

Dictyostelium discoideum (taxid: 44689)

>sp|Q1LXV8|TM136_DANRE Transmembrane protein 136 OS=Danio rerio GN=tmem136 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 72  EWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLAD 131
           EWN R ++  H I I  L+ Y  F   +      T P T  +++     L +S+GYFL D
Sbjct: 32  EWNCRLVTLFHGILIICLTAYIGF---IAGPWPFTHPGT-ENTYFQILTLVLSLGYFLFD 87

Query: 132 LGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLI-SEVTTPEINMRWYL 190
             M + +Y    G   + HH++S   +  ++  GE  + T  VL  SE+T P +  RW+L
Sbjct: 88  --MAWCVYFRTEGPVMLAHHTMSIFGILLALGLGESGIETCAVLFGSEITNPLLQARWFL 145

Query: 191 DTAG 194
              G
Sbjct: 146 KRMG 149

Danio rerio (taxid: 7955)

>sp|Q0VD42|TM136_BOVIN Transmembrane protein 136 OS=Bos taurus GN=TMEM136 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 7/141 (4%)

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
           ++  L K +  EWN R ++  H I    LS Y  F    +       P T     L    
Sbjct: 22  SFCRLNKHRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTP----LQVHV 77

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLI-SEV 179
           L +++GYF+ DLG    +Y    G   + HH+LS + +  ++  GE       VL  SE+
Sbjct: 78  LCLTLGYFIFDLGWC--IYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSEI 135

Query: 180 TTPEINMRWYLDTAGMKRSTT 200
           T P + +RW+L   G   S T
Sbjct: 136 TNPLLQIRWFLRETGHYHSFT 156

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
359484042	275	PREDICTED: transmembrane protein 56-like	0.983	0.850	0.816	1e-112
296085343	267	unnamed protein product [Vitis vinifera]	0.945	0.842	0.826	1e-108
449487670	274	PREDICTED: transmembrane protein 56-B-li	0.991	0.861	0.788	1e-108
449455419	274	PREDICTED: transmembrane protein 56-B-li	0.991	0.861	0.788	1e-108
224115498	275	predicted protein [Populus trichocarpa]	0.987	0.854	0.778	1e-107
224136440	275	predicted protein [Populus trichocarpa]	0.987	0.854	0.787	1e-107
255550713	275	conserved hypothetical protein [Ricinus	0.987	0.854	0.791	1e-107
297851934	278	hypothetical protein ARALYDRAFT_473644 [	0.974	0.834	0.762	1e-101
18397885	278	TRAM, LAG1 and CLN8 (TLC) lipid-sensing	0.974	0.834	0.758	1e-101
222423958	278	AT1G31300 [Arabidopsis thaliana]	0.974	0.834	0.754	1e-100

>gi|359484042|ref|XP_002263050.2| PREDICTED: transmembrane protein 56-like [Vitis vinifera]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/234 (81%), Positives = 216/234 (92%)

Query: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60
           MA SE+T+ AIK+YQNQA+ LVK+Y++ADPFIPYTSIL+GL ACK+VYDLTQLISTFYFK
Sbjct: 1   MASSERTIMAIKAYQNQAEQLVKDYLLADPFIPYTSILSGLFACKMVYDLTQLISTFYFK 60

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
           +Y GLTKIQR+EWNNR +STVHA FI ALSLY+VFWSDLFSD +  G +TFRSS LS FG
Sbjct: 61  SYAGLTKIQRIEWNNRSMSTVHAFFIAALSLYFVFWSDLFSDHRLAGLVTFRSSPLSTFG 120

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           LGVSVGYFLAD+GMIFWLYPSLGG+EY+VHHSLS IAVAY+M SGEGQLYTYMVLISEVT
Sbjct: 121 LGVSVGYFLADIGMIFWLYPSLGGIEYIVHHSLSAIAVAYAMMSGEGQLYTYMVLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQV 234
           TPEINMRWYLDTAGMKRS+ YL+NG++IFF WL+AR+LLFVYMFYHVYLHYDQV
Sbjct: 181 TPEINMRWYLDTAGMKRSSAYLINGIVIFFGWLVARVLLFVYMFYHVYLHYDQV 234

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085343|emb|CBI29075.3| unnamed protein product [Vitis vinifera]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/225 (82%), Positives = 209/225 (92%)

Query: 10  AIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQ 69
           AIK+YQNQA+ LVK+Y++ADPFIPYTSIL+GL ACK+VYDLTQLISTFYFK+Y GLTKIQ
Sbjct: 2   AIKAYQNQAEQLVKDYLLADPFIPYTSILSGLFACKMVYDLTQLISTFYFKSYAGLTKIQ 61

Query: 70  RMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFL 129
           R+EWNNR +STVHA FI ALSLY+VFWSDLFSD +  G +TFRSS LS FGLGVSVGYFL
Sbjct: 62  RIEWNNRSMSTVHAFFIAALSLYFVFWSDLFSDHRLAGLVTFRSSPLSTFGLGVSVGYFL 121

Query: 130 ADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWY 189
           AD+GMIFWLYPSLGG+EY+VHHSLS IAVAY+M SGEGQLYTYMVLISEVTTPEINMRWY
Sbjct: 122 ADIGMIFWLYPSLGGIEYIVHHSLSAIAVAYAMMSGEGQLYTYMVLISEVTTPEINMRWY 181

Query: 190 LDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQV 234
           LDTAGMKRS+ YL+NG++IFF WL+AR+LLFVYMFYHVYLHYDQV
Sbjct: 182 LDTAGMKRSSAYLINGIVIFFGWLVARVLLFVYMFYHVYLHYDQV 226

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487670|ref|XP_004157742.1| PREDICTED: transmembrane protein 56-B-like [Cucumis sativus]

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/236 (78%), Positives = 215/236 (91%)

Query: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60
           MAMS +TV AIKSYQ+QA  LVKNY++AD F+P+TS+L G+LACK+VYDLTQL+S FYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
           +Y GLTKIQR+EWNNRG+ST HAI+I+ +SLY+VFWSDLFSDQ+H G +TF+SS LS F 
Sbjct: 61  SYVGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           LG+SVGYFLADLG+I WLYPSLGGMEYVVHH+LSG+AVAYS+FSGEGQLYTYMVLISE+T
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIP 236
           TPEINMRWYLDTAGMKRS  YL+NG++IFFAWLIARILLF Y FYHVYLHYDQVI 
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIK 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455419|ref|XP_004145450.1| PREDICTED: transmembrane protein 56-B-like [Cucumis sativus]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/236 (78%), Positives = 215/236 (91%)

Query: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60
           MAMS +TV AIKSYQ+QA  LVKNY++AD F+P+TS+L G+LACK+VYDLTQL+S FYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
           +Y GLTKIQR+EWNNRG+ST HAI+I+ +SLY+VFWSDLFSDQ+H G +TF+SS LS F 
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           LG+SVGYFLADLG+I WLYPSLGGMEYVVHH+LSG+AVAYS+FSGEGQLYTYMVLISE+T
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIP 236
           TPEINMRWYLDTAGMKRS  YL+NG++IFFAWLIARILLF Y FYHVYLHYDQVI 
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIK 236

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115498|ref|XP_002332149.1| predicted protein [Populus trichocarpa] gi|222875199|gb|EEF12330.1| predicted protein [Populus trichocarpa]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/235 (77%), Positives = 209/235 (88%)

Query: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60
           MA+S +TV AIK+YQNQA+ LVKNY++ADPFIPYTS+L G+ ACKV YDLTQLISTFY K
Sbjct: 1   MAVSTETVMAIKTYQNQAEALVKNYLLADPFIPYTSVLGGIFACKVAYDLTQLISTFYIK 60

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
           AYNGLTK+QR+EWNNRG+ST+HAIFITA+SLY+VFWSDLFSDQ+HTG +T RSS LS  G
Sbjct: 61  AYNGLTKLQRIEWNNRGMSTIHAIFITAMSLYFVFWSDLFSDQRHTGLVTLRSSQLSIVG 120

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           LGVS+GYF  D GMIF  YP+LGG EYV+HHSLS IAVAYSM SGE QLYTYM LISEVT
Sbjct: 121 LGVSIGYFFVDFGMIFLYYPTLGGKEYVIHHSLSTIAVAYSMLSGELQLYTYMCLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
           TPEINMRWYLDTAG+KRS  YL+NG+ IF AWL+ARILLF+Y+FYH+YLHYDQVI
Sbjct: 181 TPEINMRWYLDTAGLKRSAAYLINGLAIFLAWLMARILLFLYLFYHIYLHYDQVI 235

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136440|ref|XP_002322330.1| predicted protein [Populus trichocarpa] gi|222869326|gb|EEF06457.1| predicted protein [Populus trichocarpa]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/235 (78%), Positives = 206/235 (87%)

Query: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60
           MAMS +T  AIKSYQNQA+ LVKNY++ADPFIPYTS+L G+ ACKV YDLTQLISTFY K
Sbjct: 1   MAMSTETAMAIKSYQNQAEALVKNYLLADPFIPYTSVLGGIFACKVAYDLTQLISTFYIK 60

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
            YNGLTKIQR+EWNNRG+ST+HA+FITA+SLY+VFWSDLFSD QHTG +T RSS  S  G
Sbjct: 61  TYNGLTKIQRIEWNNRGMSTIHAVFITAMSLYFVFWSDLFSDHQHTGIVTLRSSQFSIVG 120

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           LGVSVGYF ADLGMIF  YP+LGG EYV+HHSLS IAVAYSM SGE QLYTYM LISEVT
Sbjct: 121 LGVSVGYFFADLGMIFLYYPTLGGKEYVIHHSLSTIAVAYSMLSGEMQLYTYMCLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
           TPEINMRWYLDTAG KRS  YL+NG+ IF AWL+ARILLF+YMF+H+YLHYDQVI
Sbjct: 181 TPEINMRWYLDTAGHKRSAAYLINGLAIFLAWLMARILLFLYMFHHIYLHYDQVI 235

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550713|ref|XP_002516405.1| conserved hypothetical protein [Ricinus communis] gi|223544440|gb|EEF45960.1| conserved hypothetical protein [Ricinus communis]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/235 (79%), Positives = 211/235 (89%)

Query: 1   MAMSEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFK 60
           M +S++TV  IKSYQ+QAQVLVKNY++A PFIPYTS+L GL+A KV YDL+QLISTFY K
Sbjct: 1   MTVSKETVMTIKSYQSQAQVLVKNYLLASPFIPYTSVLGGLVASKVAYDLSQLISTFYIK 60

Query: 61  AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFG 120
           AY GLTK+QR+EWNNRG+S++HAIFITA SLY+VFWSDLFSDQ  T  +T RSS LS FG
Sbjct: 61  AYAGLTKMQRIEWNNRGMSSIHAIFITAASLYFVFWSDLFSDQLPTDLVTLRSSPLSIFG 120

Query: 121 LGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVT 180
           LGVSVGYF ADLGMI W YPSLGGMEYV+HHSLS IAVAYSMFSGEGQLYTYM LISEVT
Sbjct: 121 LGVSVGYFFADLGMIIWFYPSLGGMEYVIHHSLSAIAVAYSMFSGEGQLYTYMCLISEVT 180

Query: 181 TPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
           TP+INMRWYLDTAGMKRS  YL+NGV+IFFAWLIAR+LLF+Y+F+H+YLHYDQVI
Sbjct: 181 TPKINMRWYLDTAGMKRSIAYLINGVLIFFAWLIARVLLFIYIFHHIYLHYDQVI 235

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851934|ref|XP_002893848.1| hypothetical protein ARALYDRAFT_473644 [Arabidopsis lyrata subsp. lyrata] gi|297339690|gb|EFH70107.1| hypothetical protein ARALYDRAFT_473644 [Arabidopsis lyrata subsp. lyrata]

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/232 (76%), Positives = 204/232 (87%)

Query: 4   SEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYN 63
           S QT+ AIKSY +QAQ LVKNY++ADPFIPYTS+L G+  CKVVYDL   IS  + K Y 
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGV 123
            LTKIQR+EWNNRGISTVHAIFI+ALSLY+VFWSDLFSD+ H   + FRSS LS+ GLG+
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISALSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPE 183
           S+GYFLADLGMIFW YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISE+TTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
           IN+RWYLDTAGMK+S  Y+VNGV IF AWL+ARILLF+YMFYHVYLHY+QV+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVM 236

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18397885|ref|NP_564377.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gi|79319015|ref|NP_001031121.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gi|16604308|gb|AAL24160.1| At1g31300/T19E23_12 [Arabidopsis thaliana] gi|20466069|gb|AAM19956.1| At1g31300/T19E23_12 [Arabidopsis thaliana] gi|332193216|gb|AEE31337.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gi|332193217|gb|AEE31338.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/232 (75%), Positives = 204/232 (87%)

Query: 4   SEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYN 63
           S QT+ AIKSY +QAQ LVKNY++ADPFIPYTS+L G+  CKVVYDL   IS  + K Y 
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGV 123
            LTKIQR+EWNNRGISTVHAIFI+A+SLY+VFWSDLFSD+ H   + FRSS LS+ GLG+
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPE 183
           S+GYFLADLGMIFW YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISE+TTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
           IN+RWYLDTAGMK+S  Y+VNGV IF AWL+ARILLF+YMFYHVYLHY+QV+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVM 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222423958|dbj|BAH19941.1| AT1G31300 [Arabidopsis thaliana]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/232 (75%), Positives = 203/232 (87%)

Query: 4   SEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYN 63
           S QT+ AIKSY +QAQ LVKNY++ADPFIPYTS+L G+  CKVVYDL   IS  + K Y 
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGV 123
            LTKIQR+EWNNRGISTVHAIFI+A+SLY+VFWSDLFSD+ H   + FRSS LS+ GLG+
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPE 183
           S+GYFLADLGMIF  YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISE+TTPE
Sbjct: 125 SIGYFLADLGMIFRKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
           IN+RWYLDTAGMK+S  Y+VNGV IF AWL+ARILLF+YMFYHVYLHY+QV+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVM 236

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
TAIR|locus:2197480	278	AT1G31300 "AT1G31300" [Arabido	0.974	0.834	0.758	6.6e-97
TAIR|locus:504955499	268	AT4G19645 "AT4G19645" [Arabido	0.945	0.839	0.743	8.1e-92
TAIR|locus:2122814	266	AT4G10360 "AT4G10360" [Arabido	0.836	0.748	0.507	1.8e-55
ZFIN|ZDB-GENE-070912-350	263	si:dkey-10f21.4 "si:dkey-10f21	0.663	0.600	0.313	1.7e-18
ZFIN|ZDB-GENE-090402-1	276	tmem56a "transmembrane protein	0.634	0.547	0.312	2.5e-17
RGD|1563041	263	Tmem56 "transmembrane protein	0.806	0.730	0.254	3.2e-17
MGI|MGI:1923195	276	Tmem56 "transmembrane protein	0.798	0.688	0.236	1.1e-16
UNIPROTKB|F1NSV0	261	TMEM56 "Uncharacterized protei	0.705	0.643	0.256	2.9e-16
UNIPROTKB|Q96MV1	263	TMEM56 "Transmembrane protein	0.668	0.604	0.293	3.3e-15
ZFIN|ZDB-GENE-041010-90	264	tmem56b "transmembrane protein	0.684	0.617	0.266	1.4e-14

TAIR|locus:2197480 AT1G31300 "AT1G31300" [Arabidopsis thaliana (taxid:3702)]

 Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
 Identities = 176/232 (75%), Positives = 204/232 (87%)

Query:     4 SEQTVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYN 63
             S QT+ AIKSY +QAQ LVKNY++ADPFIPYTS+L G+  CKVVYDL   IS  + K Y 
Sbjct:     5 SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query:    64 GLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGV 123
              LTKIQR+EWNNRGISTVHAIFI+A+SLY+VFWSDLFSD+ H   + FRSS LS+ GLG+
Sbjct:    65 ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query:   124 SVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPE 183
             S+GYFLADLGMIFW YPSLGG+EY+VHHSLSG+AVAYS+FSGEGQLYTYMVLISE+TTPE
Sbjct:   125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query:   184 INMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
             IN+RWYLDTAGMK+S  Y+VNGV IF AWL+ARILLF+YMFYHVYLHY+QV+
Sbjct:   185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVM 236

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:504955499 AT4G19645 "AT4G19645" [Arabidopsis thaliana (taxid:3702)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 168/226 (74%), Positives = 198/226 (87%)

Query:    11 IKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQR 70
             IKSYQNQA+  V++Y++ADPF+PYTS+L G+  CK+VYDLT+L S+ + K+Y+ LTKI+R
Sbjct:     3 IKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKR 62

Query:    71 MEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPIT-FRSSWLSNFGLGVSVGYFL 129
             +EWNNRGISTVHAIFI+ ++LY+ F+SDLFSDQ+    +T FR+S LS FGLGVSVGYFL
Sbjct:    63 IEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFL 122

Query:   130 ADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWY 189
             ADLGMIFWLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISEVTTPEIN+RWY
Sbjct:   123 ADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLRWY 182

Query:   190 LDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
             LD AG+KRS  YLVNGV IFFAWL ARILLF+YMFYHVY HYDQVI
Sbjct:   183 LDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVI 228

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2122814 AT4G10360 "AT4G10360" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 101/199 (50%), Positives = 137/199 (68%)

Query:    36 SILAGLLACKVVYDLTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVF 95
             SI +G L CK+VYDLT+ IS   F  Y  L    RMEWNNRG ST HA+F +  S+Y++ 
Sbjct:    20 SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query:    96 WSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSG 155
              SD F +  H   +   ++ LS   +G+S+GYFLADL MIFW +P+LGG+EYV HH LS 
Sbjct:    80 ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query:   156 IAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIA 215
              A+  S+ SG+ Q Y ++VL+SE TTP +N+RWYLD +G K S  Y +NG+ +F  WL+A
Sbjct:   140 FAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLNGIALFLGWLVA 199

Query:   216 RILLFVYMFYHVYLHYDQV 234
             R+LLF++ F H+YLH+ QV
Sbjct:   200 RVLLFIFFFVHMYLHFHQV 218

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-070912-350 si:dkey-10f21.4 "si:dkey-10f21.4" [Danio rerio (taxid:7955)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 52/166 (31%), Positives = 87/166 (52%)

Query:    65 LTKIQRMEWNNRGISTVHAIFITALSLY-YVFWSDLFSDQQHTGPITFRSSWLSNFGLGV 123
             L+  Q+ EWN+R +STVHA+ +    LY Y+F   +  D     P+ +  + L    + V
Sbjct:    41 LSPTQKTEWNSRAVSTVHALVVGLFCLYIYIFDESIQKD-----PV-WGDATLVKLNVAV 94

Query:   124 SVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPE 183
             + GY ++DL ++F  + S+G   +V+HH  +  A  Y +  G    +    L+SE +TP 
Sbjct:    95 TSGYLMSDLLLMFTSWESIGEKYFVIHHFAALYAYYYVLSQGILPYFANFRLLSEFSTPF 154

Query:   184 INMRWYLDTAGM-KRSTTYLVNGVIIFFAWLIARILLFVYMFYHVY 228
             +N RW+    G  K S   L+NGV + F + + RI +    + H+Y
Sbjct:   155 VNQRWFFHMLGYHKLSKPSLLNGVAMAFTFFLVRIAVIPGYYSHMY 200

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-090402-1 tmem56a "transmembrane protein 56a" [Danio rerio (taxid:7955)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 51/163 (31%), Positives = 89/163 (54%)

Query:    65 LTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVS 124
             LT  Q++EWN+R +ST+HA+ +    LY +F+ +  +     G  T     L    + ++
Sbjct:    54 LTHKQKIEWNSRTVSTLHALLVGLFCLYILFFDEAVNQDPVWGDPT-----LVKINVSIT 108

Query:   125 VGYFL-ADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQL--YTYMVLISEVTT 181
              GY + ADL +IF+ + ++G   +V+HH L+ +  AY    G+G L  +    L++E +T
Sbjct:   109 TGYLISADLLLIFYYWRAIGDKFFVIHH-LAAL-YAYYYVLGQGMLPYFANFRLLAEFST 166

Query:   182 PEINMRWYLDTAGM-KRSTTYLVNGVIIFFAWLIARILLF-VY 222
             P +N RW+ +  G  K S   + NGV++   + + RI +  VY
Sbjct:   167 PCVNQRWFFEVLGYPKSSRPNMANGVLMAAVFFLVRIAVMPVY 209

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

RGD|1563041 Tmem56 "transmembrane protein 56" [Rattus norvegicus (taxid:10116)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 52/204 (25%), Positives = 101/204 (49%)

Query:    35 TSILAGLLACK-VVYDLTQLISTFYFKA-----YNGLTKIQRMEWNNRGISTVHAIFITA 88
             T+++ G + C  V + L     + +F A     YN L+  +++EWN+R +ST H++ +  
Sbjct:     5 TNVVIGTVCCSFVTFQLLFHFISCWFSARVSLGYNSLSTEKKIEWNSRVVSTCHSMLVGI 64

Query:    89 LSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYV 148
               LY  F    F +     P+    S L    +  + GY ++DL +I + +  +G   ++
Sbjct:    65 FGLYLFF----FDEATIADPLWGDPS-LVKINISTASGYLISDLLIILFNWKVIGDKFFI 119

Query:   149 VHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGM-KRSTTYLVNGVI 207
             +HH    IA  + +  G         L++E+++P +N RW+ +     K S   ++NG++
Sbjct:   120 IHHCAGLIAYYFVLKIGVLAYIANFRLLAELSSPFVNQRWFFEVLKYPKFSKVNVINGIL 179

Query:   208 IFFAWLIARILLFVYMFYHVYLHY 231
             +   + I RI+    M+++VY  Y
Sbjct:   180 MTVVFFIVRIIAIPPMYFYVYSVY 203

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1923195 Tmem56 "transmembrane protein 56" [Mus musculus (taxid:10090)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 48/203 (23%), Positives = 105/203 (51%)

Query:    36 SILAGLLACKVVYDLTQLISTFYFKA-----YNGLTKIQRMEWNNRGISTVHAIFITALS 90
             +++  + +  VV+ +     +++F A     YN L+  +++EWN+R +ST H++ +    
Sbjct:    20 AVICTVCSSFVVFQILFHFVSYWFSARVSSGYNSLSIDKKIEWNSRVVSTCHSLLVGIFG 79

Query:    91 LYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVH 150
             LY  F    F +   T P+    +++ N  +  + GY ++DL +I + +  +G   +++H
Sbjct:    80 LYLFF----FDEATITDPLWGDPTYV-NINIATASGYLISDLLIILFNWKVIGDKFFIIH 134

Query:   151 HSLSGIAVAYSMFSGEGQLY-TYMVLISEVTTPEINMRWYLDTAGM-KRSTTYLVNGVII 208
             H  +G+   Y + +     Y     L++E+++P +N RW+ +     K S   ++NG+++
Sbjct:   135 HC-AGLTAYYFVLTTGALAYIANFRLLAELSSPFVNQRWFFEALKYPKFSKANVINGILM 193

Query:   209 FFAWLIARILLFVYMFYHVYLHY 231
                + I RI+    M++ +Y  Y
Sbjct:   194 TVVFFIVRIISIPPMYFFLYSVY 216

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NSV0 TMEM56 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 46/179 (25%), Positives = 95/179 (53%)

Query:    50 LTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPI 109
             L+  +ST     ++ L++ +++EWN+R +ST HA+ +    LY + + +  +     G  
Sbjct:    25 LSSWVSTRITPGFSNLSQKRKIEWNSRTVSTFHALVVGGFCLYILLYDEAVNADHLWGDP 84

Query:   110 TFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQL 169
             +     +    + ++ GY ++DL +I   + ++G   +V+HH L+ +   Y + S +G L
Sbjct:    85 S-----IVKLNIAITTGYLISDLLLIICYWKAIGDKFFVIHH-LAALYAYYFVLS-KGLL 137

Query:   170 YTY--MVLISEVTTPEINMRWYLDTAGM-KRSTTYLVNGVIIFFAWLIARILLFVYMFY 225
               +    L++E +TP +N RW+ +  G  K S   ++NGV++   + + RI +   M+Y
Sbjct:   138 AYFGNFRLLAEFSTPFVNQRWFFEVLGYPKSSKANMINGVLMTVVFFVVRIAVMP-MYY 195

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q96MV1 TMEM56 "Transmembrane protein 56" [Homo sapiens (taxid:9606)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 51/174 (29%), Positives = 93/174 (53%)

Query:    62 YNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGL 121
             +N L+  +++EWN+R +ST H++ +    LY +F   LF +     P+    S L+N  +
Sbjct:    38 FNSLSFKKKIEWNSRVVSTCHSLVVGIFGLY-IF---LFDEATKADPLWGGPS-LANVNI 92

Query:   122 GVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMV---LISE 178
              ++ GY ++DL +I   +  +G   +++HH  S    AY +    G L  Y+    L++E
Sbjct:    93 AIASGYLISDLSIIILYWKVIGDKFFIMHHCAS--LYAYYLVLKNGVL-AYIGNFRLLAE 149

Query:   179 VTTPEINMRWYLDTAGM-KRSTTYLVNGVIIFFAWLIARI--LLFVYMF-YHVY 228
             +++P +N RW+ +     K S   ++NG+++   + I RI  +L  Y F Y VY
Sbjct:   150 LSSPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRIASMLPHYGFMYSVY 203

GO:0016021 "integral to membrane" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-041010-90 tmem56b "transmembrane protein 56b" [Danio rerio (taxid:7955)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 45/169 (26%), Positives = 85/169 (50%)

Query:    50 LTQLISTFYFKAYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPI 109
             ++ ++S+ + + Y  L   +  +WN+R +STVHA+ I  L   Y+ W D   D  +  P+
Sbjct:    23 VSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHAL-IVGLFCLYILWYD---DAVNEDPV 78

Query:   110 TFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQL 169
              +    L    + ++ GY   DL ++   + ++G + +V HH  +  A  Y +  G    
Sbjct:    79 -WGDPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAALYAYGYVLTRGVLPY 137

Query:   170 YTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLV-NGVIIFFAWLIARI 217
             +    LISE++TP +N RW+ +     R+   +V NG+ +   + + RI
Sbjct:   138 FANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFLVRI 186

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	238
smart00724	205	smart00724, TLC, TRAM, LAG1 and CLN8 homology doma	2e-25
pfam03798	198	pfam03798, TRAM_LAG1_CLN8, TLC domain	5e-19

>gnl|CDD|214789 smart00724, TLC, TRAM, LAG1 and CLN8 homology domains

 Score = 98.5 bits (246), Expect = 2e-25
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 70  RMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFL 129
             E +NR +S +H++     +LY   W    SD +   PI    S L+ F    S+GYF+
Sbjct: 3   FNESSNRLVSYLHSVIAGLYALYSEPW---LSDPKSLYPI-QGMSPLAKFYYLFSLGYFI 58

Query: 130 ADLGMIFWLYPSLGGM--EYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMR 187
            DL  +            E +VHH  + + ++ S      +L   ++L+ E++ P +++R
Sbjct: 59  HDLVALLLFQDLKRKDFKEMLVHHIATLLLISLSYVLNFTRLGLLLLLLHELSDPFLHLR 118

Query: 188 WYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVI 235
             L+ AG K+S  Y VN V+    + + R++LF ++   V +HY Q  
Sbjct: 119 KLLNYAGRKKSLLYDVNFVLFAVVFFVFRLILFPFLILTVTVHYAQAE 166

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains. Length = 205

>gnl|CDD|217735 pfam03798, TRAM_LAG1_CLN8, TLC domain

 Score = 81.2 bits (201), Expect = 5e-19
 Identities = 38/171 (22%), Positives = 82/171 (47%), Gaps = 8/171 (4%)

Query: 72  EWNNRGISTVHAIFITALSLYYVFWSDLFSDQQ-----HTGPITFRSSWLSNFGLGVSVG 126
           ++N RG+S VH +    L LY +     F +       +   I   +S L  F   + +G
Sbjct: 1   KFNERGVSLVHYLVSGILGLYVLLSEPWFWNPTWLWYPYPDRILGGTSALVKFYYLIQLG 60

Query: 127 YFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINM 186
           YFL DL ++ +        E ++HH ++ + +++S F    ++   ++L+ E++ P +++
Sbjct: 61  YFLHDLLVLLFYEKRRKW-EMLLHHIITLLLISFSYFYNFTRVGLLVLLLHELSDPFLHL 119

Query: 187 RWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVYLHYDQVIPS 237
           R +L+  G K+S   L   V+   ++ + R++L  ++     L   ++   
Sbjct: 120 RKFLNYLGKKKSCDVLF--VLFLVSFFLVRLVLGPFLILLSILDEARLDIP 168

Length = 198

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
KOG4561	281	consensus Uncharacterized conserved protein, conta	100.0
PF03798	198	TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TL	99.96
smart00724	205	TLC TRAM, LAG1 and CLN8 homology domains. Protein	99.96
KOG4474	253	consensus Uncharacterized conserved protein [Funct	99.94
COG5058	395	LAG1 Protein transporter of the TRAM (translocatin	96.79
KOG1607	318	consensus Protein transporter of the TRAM (translo	95.81

>KOG4561 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]

Probab=100.00  E-value=2.6e-38  Score=274.23  Aligned_cols=223  Identities=35%  Similarity=0.569  Sum_probs=187.3

Q ss_pred             hHHHHhhcHHHHHHHhhhhccCCCcccHHHHHHHHHHHHHHHHHH---HHHHhhhhhhhcCCCcchhccee-ehhhHHHH
Q 026443            7 TVTAIKSYQNQAQVLVKNYIIADPFIPYTSILAGLLACKVVYDLT---QLISTFYFKAYNGLTKIQRMEWN-NRGISTVH   82 (238)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~i~~ls---~~ls~~~~k~y~~l~~~~k~~w~-~r~vS~vH   82 (238)
                      ++.+.+++..+.+.++.+...++++..+.....++++|+..|++.   +..++...++|.++++++|+||| +|+||++|
T Consensus         2 ~i~~~~~~~~~~s~~v~~~~~~~~~~~l~~~~~~~l~~~v~y~~~~~~~~~s~s~~~~~~~l~~k~~i~wn~~~~Vs~~h   81 (281)
T KOG4561|consen    2 VIPMLPARIGLTSELVKLSLGAIFFVLLTAHCHGILFYFVVYQLCNVIHNISVSLSHTYRSLDKKLKIEWNCVRVVSTVH   81 (281)
T ss_pred             CCCCCCCcccccchhhhhccchHHHHHHHHHHHHHHHHhhhhhhhceehheeehhhhhHhhhcCcEEEEEecCceeeeeh
Confidence            456678889999999999999999999999999999999999988   77777777999999999999999 99999999


Q ss_pred             HHHHHHHHHHHHhccCCCC-CCCCCCCccccCChhhHHHHHHHHHHHHHHHHHHHHhcccCCChhhHHHHHHHHHHhHHH
Q 026443           83 AIFITALSLYYVFWSDLFS-DQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGGMEYVVHHSLSGIAVAYS  161 (238)
Q Consensus        83 Aiv~~~~~~~~l~~~~~~~-~~~~~d~i~~~~s~~~~~~~~~s~GYFl~Dl~~~~~~~~~~~~~~~llHH~~~l~~~~~~  161 (238)
                      +++++  ++|+++.++.+. |....+...+..+......    .|||++|+..+.++++..+|.+|++||++++......
T Consensus        82 slv~~--s~y~lf~~~~f~yD~~~~~~~~~~~~~~~~~g----~gy~i~dl~~i~~~~~~~~~~~fviHh~~s~~~v~~~  155 (281)
T KOG4561|consen   82 SLVSS--SLYFLFGTPYFHYDKATGYSVVWSKHRDTSVG----IGYFIPDLTWIIVRYFVLGGIEFVIHHIASLVFVGCL  155 (281)
T ss_pred             Hhhhc--ccceeecCcccchhhhhccceeecceeecccc----ceEecccceeEEEEeeeecCeeEEeeHHHHhhhheee
Confidence            99998  889888776554 4443333334433333222    5699999986667788899999999999994444444


Q ss_pred             hccCCchhHHHHHHHHhhcchhhhHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHH--Hhccccc
Q 026443          162 MFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFYHVY--LHYDQVI  235 (238)
Q Consensus       162 l~~~~~~~~~~~~Ll~ElSTPFlnlRw~L~~~g~~~s~~y~~n~~l~~~tFf~~Ri~~~~y~~~~~~--~~~~~v~  235 (238)
                      ...|.+++++..+|++|+||||+|+||+++++|+|+|++|++||++++++|+++||+..||++++++  .+..+++
T Consensus       156 ~~~~~g~y~~~~~L~~ElSTPFvnlrw~L~~~~~k~Sl~~~vNG~lm~~~F~v~RIll~~~~~~~~~~~~~~~~~~  231 (281)
T KOG4561|consen  156 LRRGVGQYYAGTFLMAELSTPFVNLRWFLDKAGQKKSLFYKVNGLLLLVVFFVARILLWPYMGWHYYWRYQGLVLN  231 (281)
T ss_pred             EecCccceeeeeeheeecCCceeeHHHHHHHcCcccchHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            5678899999999999999999999999999999999999999999999999999998889988888  4444443

>PF03798 TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TLC is a protein domain with at least 5 transmembrane alpha-helices

Probab=99.96  E-value=5.9e-29  Score=206.44  Aligned_cols=161  Identities=34%  Similarity=0.599  Sum_probs=136.5

Q ss_pred             ceeehhhHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccCChhhHHHHHHHHHHHHHHHHHHHHhcccCCC-hhhHHH
Q 026443           72 EWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLGG-MEYVVH  150 (238)
Q Consensus        72 ~w~~r~vS~vHAiv~~~~~~~~l~~~~~~~~~~~~d~i~~~~s~~~~~~~~~s~GYFl~Dl~~~~~~~~~~~~-~~~llH  150 (238)
                      ||++|++|++||++++.+|++++..++...++.. |....++++..+...++++|||++|++++..+.+..+| .++++|
T Consensus         1 ~~~~~~~s~~h~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gYf~~Dl~~~~~~~~~~~d~~~~~~H   79 (198)
T PF03798_consen    1 KWNNRVVSFVHAIVSSIWGLYILLNDPELWSDWP-DDPWYYSSWLVKFYYAFSLGYFLYDLIVMLLYYRKRGDFWEMLLH   79 (198)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHhcCcHHhhhcc-cCccCCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHH
Confidence            6999999999999999999999987642111122 33323446677789999999999999999986654443 899999


Q ss_pred             HHHHHHHhHHHhccCCchhHHHHHHHHhhcchhhhHHHHHHHc-CC-CCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 026443          151 HSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTA-GM-KRSTTYLVNGVIIFFAWLIARILLFVYMFYHVY  228 (238)
Q Consensus       151 H~~~l~~~~~~l~~~~~~~~~~~~Ll~ElSTPFlnlRw~L~~~-g~-~~s~~y~~n~~l~~~tFf~~Ri~~~~y~~~~~~  228 (238)
                      |++++.++..+...+.+.+++..+++.|+||||+|+||++++. |. +++..+.+|+++++++|+++|++.+|+..++.+
T Consensus        80 H~~~l~~~~~~~~~~~~~~~~~~~ll~E~st~fl~~r~~l~~~~~~~~~~~~~~~~~~~f~~~f~~~Ri~~~~~~~~~~~  159 (198)
T PF03798_consen   80 HVVTLVLFYFSYFYNFGRFGIVVFLLHEISTPFLNLRWFLKYLGGYSKKSSLYRFNGVLFAVTFFVFRIVLFPYLIYWVY  159 (198)
T ss_pred             HHHHHHHHHHhhHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988887888999999999999999999999999999 77 688999999999999999999999999988888


Q ss_pred             Hhccc
Q 026443          229 LHYDQ  233 (238)
Q Consensus       229 ~~~~~  233 (238)
                      .+..+
T Consensus       160 ~~~~~  164 (198)
T PF03798_consen  160 WDVWP  164 (198)
T ss_pred             HHhcc
Confidence            76544

Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis [], TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. Proteins containing this domain may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains [].; GO: 0016021 integral to membrane

>smart00724 TLC TRAM, LAG1 and CLN8 homology domains

Probab=99.96  E-value=3.1e-28  Score=204.58  Aligned_cols=162  Identities=29%  Similarity=0.407  Sum_probs=141.1

Q ss_pred             chhcceeehhhHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccCChhhHHHHHHHHHHHHHHHHHHHHhcccCC--Ch
Q 026443           68 IQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLG--GM  145 (238)
Q Consensus        68 ~~k~~w~~r~vS~vHAiv~~~~~~~~l~~~~~~~~~~~~d~i~~~~s~~~~~~~~~s~GYFl~Dl~~~~~~~~~~~--~~  145 (238)
                      +|+.||++|++|.+||++++..+++....   +.|+..+++. .+.++..+...++++|||++|+.++..+.+...  ++
T Consensus         1 ~k~~e~~~~~vs~~hs~~~~~~~~~~~~~---~~~~~~~~p~-~~~~~~~~~~~~~~~gYfi~d~~~~~~~~~~~~~d~~   76 (205)
T smart00724        1 SKFNESSNRLVSYLHSVIAGLYALYSEPW---LSDPKSLYPI-QGMSPLAKFYYLFSLGYFIHDLVALLLFQDLKRKDFK   76 (205)
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhccCCc---ccCCcccCCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHH
Confidence            47889999999999999999999887653   1122223554 677999999999999999999999986554433  79


Q ss_pred             hhHHHHHHHHHHhHHHhccCCchhHHHHHHHHhhcchhhhHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 026443          146 EYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARILLFVYMFY  225 (238)
Q Consensus       146 ~~llHH~~~l~~~~~~l~~~~~~~~~~~~Ll~ElSTPFlnlRw~L~~~g~~~s~~y~~n~~l~~~tFf~~Ri~~~~y~~~  225 (238)
                      ++++||++++.++..+...+....++...++.|+||||+|+||+++++|.|+++++..|+.+++++|+++|++++|+..+
T Consensus        77 ~~~~HHv~~~~~~~~~~~~~~~~~~~~~~~l~E~s~~fl~~~~~l~~~~~~~~~~~~~~~~~f~~~f~~~R~~~~p~~~~  156 (205)
T smart00724       77 EMLVHHIATLLLISLSYVLNFTRLGLLLLLLHELSDPFLHLRKLLNYAGRKKSLLYDVNFVLFAVVFFVFRLILFPFLIL  156 (205)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988888788888888889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccc
Q 026443          226 HVYLHYDQ  233 (238)
Q Consensus       226 ~~~~~~~~  233 (238)
                      ..+.+.++
T Consensus       157 ~~~~~~~~  164 (205)
T smart00724      157 TVTVHYAQ  164 (205)
T ss_pred             HHHhhhhh
Confidence            98887665

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains.

>KOG4474 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.94  E-value=1.3e-26  Score=197.43  Aligned_cols=167  Identities=22%  Similarity=0.275  Sum_probs=145.4

Q ss_pred             CCCcchhcceeehhhHHHHHHHHHHHHHHHHhccCCCCCCCCCCCccccCChhhHHHHHHHHHHHHHHHHHHHHhcccCC
Q 026443           64 GLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQHTGPITFRSSWLSNFGLGVSVGYFLADLGMIFWLYPSLG  143 (238)
Q Consensus        64 ~l~~~~k~~w~~r~vS~vHAiv~~~~~~~~l~~~~~~~~~~~~d~i~~~~s~~~~~~~~~s~GYFl~Dl~~~~~~~~~~~  143 (238)
                      .++..+|.+|.|+.||++||++++.++.+++..++    +...|++ ...+..+..+.++|+|||++|+++|..+.....
T Consensus        37 ~~s~~~~~r~~n~~VSl~HS~Isg~~a~~~l~~~~----~~~~~~~-~~~s~~~~~l~~fS~gYfiyD~vDm~~~~~s~~  111 (253)
T KOG4474|consen   37 WFSVYQKKRFSNLTVSLLHSTISGLWALLSLLYDP----EMVDDPI-TYHSLSAYQLLLFSAGYFIYDLVDMLMNEQSEL  111 (253)
T ss_pred             eeccccchhhhhhHHHHHHHHHHHHHHHHHHHhCc----ccccCHH-HHHhhhhHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence            46677799999999999999999999999988642    3445666 455788899999999999999999998654456


Q ss_pred             ChhhHHHHHHHHHHhHHHhccCCchhHHHHHHHHhhcchhhhHHHHHHHcCCCC-ChHHHHHHHHHHHHHHHHHHhHHHH
Q 026443          144 GMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKR-STTYLVNGVIIFFAWLIARILLFVY  222 (238)
Q Consensus       144 ~~~~llHH~~~l~~~~~~l~~~~~~~~~~~~Ll~ElSTPFlnlRw~L~~~g~~~-s~~y~~n~~l~~~tFf~~Ri~~~~y  222 (238)
                      .+++++||++++.++..+++++++..++.+.+++|+|+||+|+|.+++.+|.++ ++.++++..++.++||++|++...|
T Consensus       112 s~e~LvHH~v~i~aF~~~lf~~~~~~~~~~~llmEv~SiFLH~R~il~l~g~s~~~~~~rv~v~lN~i~f~~fR~~~~~~  191 (253)
T KOG4474|consen  112 SWEYLVHHVVCIIAFVLGLFYSKFLGYVVAALLMEVSSIFLHLRSILKLAGLSTTLPSFRVVVYLNLITFFFFRLIPQIY  191 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHhcccee
Confidence            789999999999999999999998889999999999999999999999999865 4479999999999999999999999


Q ss_pred             HHHHHHHhccccc
Q 026443          223 MFYHVYLHYDQVI  235 (238)
Q Consensus       223 ~~~~~~~~~~~v~  235 (238)
                      +.++.+.+.+.++
T Consensus       192 l~~~~i~~~~~~~  204 (253)
T KOG4474|consen  192 LTYFLIANAPFLH  204 (253)
T ss_pred             EEEEEeeeCCCcc
Confidence            8887777665444

>COG5058 LAG1 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion]

Probab=96.79  E-value=0.003  Score=56.39  Aligned_cols=150  Identities=13%  Similarity=0.110  Sum_probs=96.8

Q ss_pred             CCcchhcceeehhhHHHHHHHHHHHHHHHHhccCCCCC---CCCCC-CccccCChhhHHHHHHHHHHHHHHHHHHHHh--
Q 026443           65 LTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSD---QQHTG-PITFRSSWLSNFGLGVSVGYFLADLGMIFWL--  138 (238)
Q Consensus        65 l~~~~k~~w~~r~vS~vHAiv~~~~~~~~l~~~~~~~~---~~~~d-~i~~~~s~~~~~~~~~s~GYFl~Dl~~~~~~--  138 (238)
                      -++++..+++...-+.+--.+++..|+|+...++.|.-   +..++ |. +...+.-...-.+-.||-+....+.+++  
T Consensus       149 ~s~kkikRf~eq~y~~fyy~v~g~~Glyvmrss~~w~fntk~l~etyp~-~~~p~lfk~fYliqaafw~qQa~ilvLqlE  227 (395)
T COG5058         149 RSEKKIKRFCEQMYAIFYYGVSGPFGLYVMRSSPLWFFNTKALYETYPV-FYNPFLFKAFYLIQAAFWAQQACILVLQLE  227 (395)
T ss_pred             CCHHHHHHHHHHHHHHHHhhccccceEEEEecCcchhhhhHHHHHhCcc-ccCcHHHHHHHHHHHHHHHHHHhhheeeec
Confidence            34555578899888999899999999999887766531   11111 23 4445555555667778888885555442  


Q ss_pred             cccCCChhhHHHHHHHHHHhHHHhccCCchhHHHHHHHHhhcchhhhHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHh
Q 026443          139 YPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARIL  218 (238)
Q Consensus       139 ~~~~~~~~~llHH~~~l~~~~~~l~~~~~~~~~~~~Ll~ElSTPFlnlRw~L~~~g~~~s~~y~~n~~l~~~tFf~~Ri~  218 (238)
                      .|+..-++++.||++.++-...+......-.-.+....+.+|-|||.+...+.-.|-  ..++.+- .+|+..|+-.|-.
T Consensus       228 kprkD~~elv~HHIVTllLI~lSY~fhftr~GlAI~itmDvSD~~Ls~sK~lnYl~~--~l~~~iF-~iFv~~wIysRHy  304 (395)
T COG5058         228 KPRKDFKELVFHHIVTLLLIWLSYVFHFTRMGLAIYITMDVSDFFLSLSKTLNYLNS--VLATFIF-GIFVFIWIYSRHY  304 (395)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEEEeccHHHHHHHHHHHHhhc--hhHHHHH-HHHHHHHHHHHHH
Confidence            344456789999999877654443222221122234588999999999888766654  3334333 4577888888833

>KOG1607 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.81  E-value=0.36  Score=43.49  Aligned_cols=162  Identities=14%  Similarity=0.161  Sum_probs=100.5

Q ss_pred             hhcCCCcchhcceeehhhHHHHHHHHHHHHHHHHhccCCCCCCC---CCCCccccCChhhHHHHHHHHHHHHHHHHHHHH
Q 026443           61 AYNGLTKIQRMEWNNRGISTVHAIFITALSLYYVFWSDLFSDQQ---HTGPITFRSSWLSNFGLGVSVGYFLADLGMIFW  137 (238)
Q Consensus        61 ~y~~l~~~~k~~w~~r~vS~vHAiv~~~~~~~~l~~~~~~~~~~---~~d~i~~~~s~~~~~~~~~s~GYFl~Dl~~~~~  137 (238)
                      .++.-+++++.+.....=.++--.++.+.|+++...++-+.+..   .+-|. ....+.-...-.+-+|+-..-+..+..
T Consensus        77 ~~~~~~~~~~~k~~Es~Wk~~yy~~s~~~glyV~~~~~wf~~~k~~w~~yP~-~~~~~~~k~~Y~~e~gfY~~~l~al~~  155 (318)
T KOG1607|consen   77 RLNVTADRRKKKFCESAWKFLYYLVSWIFGLYVMYHEPWFYDTKSFWEGYPD-QTLPPSFKAYYLLEAGFYIQLLFALFL  155 (318)
T ss_pred             hcCCcCchhhhhhHHHHHHHHHHHHHHHHhhhheecchhhcCHHHHHhcCCC-CCCCHHHHHHHHHhhHHHHHHHHHHHh
Confidence            44444455556777777777888888888999887632222210   11111 222344455567778887777777765


Q ss_pred             hcccCCChhhHHHHHHHHHHhHHHhccCCchhHHHHHHHHhhcchhhhHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHH
Q 026443          138 LYPSLGGMEYVVHHSLSGIAVAYSMFSGEGQLYTYMVLISEVTTPEINMRWYLDTAGMKRSTTYLVNGVIIFFAWLIARI  217 (238)
Q Consensus       138 ~~~~~~~~~~llHH~~~l~~~~~~l~~~~~~~~~~~~Ll~ElSTPFlnlRw~L~~~g~~~s~~y~~n~~l~~~tFf~~Ri  217 (238)
                      ...+..-.++++||+++++-...+...+..-.-.....+...|-++|-+..+++-.+.+  .+-...-+++...|+..|+
T Consensus       156 d~~rkDf~~m~vHHvvTl~Li~lSy~~~f~R~G~lil~lhD~SD~~Le~~K~~nY~~~~--~~~~~~F~~F~~~wi~~RL  233 (318)
T KOG1607|consen  156 DEKRKDFWEMVVHHVVTLILISLSYVFNFTRVGTLILALHDASDVFLELGKMLNYLQFE--AIADFVFVLFAFSWIYTRL  233 (318)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHHHhhhhcccceeeeeecchHHHHHHHHHHchhhHH--HHHHHHHHHHHHHHHHHHH
Confidence            44443446799999998766555443332222233445788899999987766554443  4444445678889999998


Q ss_pred             hHHHHHHH
Q 026443          218 LLFVYMFY  225 (238)
Q Consensus       218 ~~~~y~~~  225 (238)
                      ...|....
T Consensus       234 ~~~p~wil  241 (318)
T KOG1607|consen  234 IYYPFWIL  241 (318)
T ss_pred             HHHHHHHH
Confidence            77765543

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00