Citrus Sinensis ID: 026505

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKVCS
Secondary Structure (PSIPRED)
cccccccccccEEEEEEcEEEEEEEHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEccccccHHHHHHHHcccccccEEEEEEcccccccccccccccccccEEEccccccccccccHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccccccEEEEEHHHHHHHHcccccHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEcccccccHHHHHHHHHccccccEEEEEEccccccccccccccccEcccccccccEEEEccccHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHcccccHHHcccccccccccccccccccHHHHccccEEEEEEHHHHHHHHHcHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
mtkkaapkvgrHVLWFSWKLVTFFCIAFSLVALFRLHLrydisssavsrtrsrihydgpAKIAFLFLARRElpldflwgsffeiadvenfsifihsapgfvfdelttrskffygrqlsNSIQVAWGESSMIAAERLLLEAAledpanqrfvllsdscvpiynFSYVYKYLMASPRSFVDSFLdrkesrynpkmsptipkgkwrkgsQWITLIRRHAevivddeiiFPVFKKCCKVCS
Flexible Loop (DISEMBL)
mtkkaapkvgrhvLWFSWKLVTFFCIAFSLVALFRLHLRYdisssavsrtrsrihyDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDrkesrynpkmsptipkgkwrkgsQWITLIRRHAEVIVDDEIIFPVFKKCCKVCS
Low Complexity Region (SEG)
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIaaerllleaaleDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKVCS
Disordered region (IsUnstruct)
********VGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFL*****************GKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKVC*
Disordered Region (DISOPRED)
***************FSWKLVTFFCIAFSLVALFRLHL***********************IAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKVC*
Disordered Region (DISEMBL)
********VGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKVCS
Disordered Region (DISPRO)
*********GRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKVCS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
225444319	380	PREDICTED: uncharacterized protein LOC10	0.987	0.615	0.710	4e-93
255554795	405	conserved hypothetical protein [Ricinus	0.987	0.577	0.696	1e-91
449433986	382	PREDICTED: uncharacterized protein LOC10	0.983	0.609	0.712	1e-90
224115850	386	predicted protein [Populus trichocarpa]	0.983	0.603	0.691	1e-88
297849568	383	hypothetical protein ARALYDRAFT_312224 [	0.995	0.616	0.602	1e-80
30682534	383	Core-2/I-branching beta-1,6-N-acetylgluc	0.995	0.616	0.606	1e-80
3157941	364	Contains similarity to hypothetical prot	0.995	0.648	0.606	2e-80
356532315	377	PREDICTED: uncharacterized protein LOC10	0.924	0.580	0.678	3e-77
297837193	370	hypothetical protein ARALYDRAFT_475115 [	0.957	0.613	0.620	2e-74
42570100	378	Core-2/I-branching beta-1,6-N-acetylgluc	0.957	0.600	0.605	2e-74

>gi|225444319|ref|XP_002264137.1| PREDICTED: uncharacterized protein LOC100262450 [Vitis vinifera] gi|302144098|emb|CBI23203.3| unnamed protein product [Vitis vinifera]

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 169/238 (71%), Positives = 188/238 (78%), Gaps = 4/238 (1%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIH----Y 56
           MTKKA     RHV WF WKLV    +A  ++AL RL    ++SS ++     R +    Y
Sbjct: 1   MTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGPRFYRVSVY 60

Query: 57  DGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
            G  KIAFLFL RR LPLDFLWGSFFE AD  NFSI+IHS PGFVFDE T+RS+FFY RQ
Sbjct: 61  QGNPKIAFLFLVRRSLPLDFLWGSFFENADAANFSIYIHSQPGFVFDETTSRSRFFYNRQ 120

Query: 117 LSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
           LSNSIQVAWGESSMI AERLL EAALEDPANQRFVLLSDSCVP+YNFSY+Y Y+MASPRS
Sbjct: 121 LSNSIQVAWGESSMIQAERLLFEAALEDPANQRFVLLSDSCVPLYNFSYIYNYMMASPRS 180

Query: 177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           +VDSFLD KE RYNPKMSP IPK KWRKGSQWI+L+R HAEVIVDD++IF VFKK CK
Sbjct: 181 YVDSFLDVKEGRYNPKMSPVIPKAKWRKGSQWISLVRSHAEVIVDDQVIFSVFKKFCK 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554795|ref|XP_002518435.1| conserved hypothetical protein [Ricinus communis] gi|223542280|gb|EEF43822.1| conserved hypothetical protein [Ricinus communis]

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/250 (69%), Positives = 192/250 (76%), Gaps = 16/250 (6%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYD-----------ISSSAVSR 49
           MTKKA P   RHV+W  WKLV    ++  + AL RLH + D            SSS+  R
Sbjct: 14  MTKKAPPVPPRHVIWLGWKLVIILSVSLCVFALLRLHFQSDHYSSPSSSSSSSSSSSFYR 73

Query: 50  TRSRI-----HYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE 104
            RSR+      + GP K+AFLFL R++LPLDFLWGSFFE ADV +FSIFIHS+PGF FDE
Sbjct: 74  PRSRLSRANLEFHGPPKLAFLFLVRQDLPLDFLWGSFFENADVASFSIFIHSSPGFEFDE 133

Query: 105 LTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFS 164
            TTRS FFYGRQL NSIQVAWGESSMI AERLLL AALEDPANQRFVLLSDSCVP+YNFS
Sbjct: 134 STTRSHFFYGRQLKNSIQVAWGESSMIEAERLLLSAALEDPANQRFVLLSDSCVPLYNFS 193

Query: 165 YVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEI 224
           Y+Y Y+MASPRSFVDSFLD KE RYN KMSP I K KWRKGSQWITLIR HAEVIVDDE+
Sbjct: 194 YIYSYVMASPRSFVDSFLDTKEDRYNQKMSPIIQKHKWRKGSQWITLIRSHAEVIVDDEV 253

Query: 225 IFPVFKKCCK 234
           IFP F+K CK
Sbjct: 254 IFPEFQKYCK 263

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433986|ref|XP_004134777.1| PREDICTED: uncharacterized protein LOC101222689 [Cucumis sativus] gi|449479497|ref|XP_004155615.1| PREDICTED: uncharacterized protein LOC101225507 [Cucumis sativus]

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 171/240 (71%), Positives = 191/240 (79%), Gaps = 7/240 (2%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLR---YDISSSAVSRTRSRIHYD 57
           M KKA     R + WFSWKL+  F +A  + AL  LH      D++S+++SR R R   D
Sbjct: 1   MKKKALLTPPRSLFWFSWKLLVTFSLALCIFALVSLHSSPSTTDLASASLSR-RLRPPSD 59

Query: 58  ---GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYG 114
              G  KIAFLFL RR LPLDFLWGSFFE  DV NFSI+IHSAPGFVFDE TTRS FF+G
Sbjct: 60  SFLGRPKIAFLFLTRRNLPLDFLWGSFFENGDVANFSIYIHSAPGFVFDESTTRSHFFFG 119

Query: 115 RQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASP 174
           RQL NSIQVAWG+SSMIAAERLLLEAALEDPANQRF+LLSDSCVP+YNFSY+Y YLMASP
Sbjct: 120 RQLENSIQVAWGKSSMIAAERLLLEAALEDPANQRFILLSDSCVPLYNFSYIYSYLMASP 179

Query: 175 RSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           +SFVDSFLD KE RYNPKMSP IPK KWRKGSQWI+LIR HAEV+VDD+IIFP+F   CK
Sbjct: 180 KSFVDSFLDAKEGRYNPKMSPAIPKSKWRKGSQWISLIRSHAEVVVDDDIIFPIFGLFCK 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115850|ref|XP_002317140.1| predicted protein [Populus trichocarpa] gi|222860205|gb|EEE97752.1| predicted protein [Populus trichocarpa]

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 168/243 (69%), Positives = 185/243 (76%), Gaps = 10/243 (4%)

Query: 1   MTKKAA------PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRS-- 52
           MTKK++       +  R V+W  WKLV    +   + ALFR+HL      + +SR RS  
Sbjct: 1   MTKKSSLLPILLQQSRRRVIWSGWKLVIILSMGLCVFALFRIHLS-SPPETLLSRRRSFS 59

Query: 53  -RIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKF 111
             + + GP KIAFLFL RR LPLDFLWGSFFE AD  NFSI +HS PGF FDE TTRS F
Sbjct: 60  REVVFSGPPKIAFLFLVRRGLPLDFLWGSFFENADTGNFSIHVHSEPGFEFDESTTRSHF 119

Query: 112 FYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLM 171
           FYGRQL NSIQV WGESSMI AERLLL+AALEDPANQRFVLLSDSCVP+YNFSY+Y YLM
Sbjct: 120 FYGRQLKNSIQVIWGESSMIEAERLLLDAALEDPANQRFVLLSDSCVPLYNFSYIYSYLM 179

Query: 172 ASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKK 231
           ASPRSFVDSFLD KE RY+PKMSP IPK KWRKGSQWI LIR HAEVIVDD +I PVFKK
Sbjct: 180 ASPRSFVDSFLDVKEGRYHPKMSPVIPKDKWRKGSQWIALIRSHAEVIVDDVVILPVFKK 239

Query: 232 CCK 234
            CK
Sbjct: 240 LCK 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849568|ref|XP_002892665.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata] gi|297338507|gb|EFH68924.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata]

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/249 (60%), Positives = 192/249 (77%), Gaps = 13/249 (5%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MT+K+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTRKSQPQIQPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSDTTLPSPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSLPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMIAAERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIAAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           +YL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 RYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIDLIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKVC 236
           VFK+ CK C
Sbjct: 241 VFKEFCKRC 249

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682534|ref|NP_172658.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|26450342|dbj|BAC42287.1| unknown protein [Arabidopsis thaliana] gi|28827514|gb|AAO50601.1| unknown protein [Arabidopsis thaliana] gi|332190698|gb|AEE28819.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 13/249 (5%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MTKK+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMI AERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKVC 236
           VFK+ CK C
Sbjct: 241 VFKEFCKRC 249

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3157941|gb|AAC17624.1| Contains similarity to hypothetical protein gb|U95973 from A. thaliana [Arabidopsis thaliana]

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 13/249 (5%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MTKK+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMI AERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKVC 236
           VFK+ CK C
Sbjct: 241 VFKEFCKRC 249

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532315|ref|XP_003534719.1| PREDICTED: uncharacterized protein LOC100805897 [Glycine max]

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 156/230 (67%), Positives = 179/230 (77%), Gaps = 11/230 (4%)

Query: 11  RHVLWFSWKLVTFFCIAFSLV------ALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAF 64
           RH +  S K++  F  + S V      +LFR H         +S + SR+ +DGP KIAF
Sbjct: 11  RHSI-ISRKMLILFSASLSCVVVLVICSLFRFH----SPKPPISISISRVVFDGPPKIAF 65

Query: 65  LFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVA 124
           LFL RR LPLDFLW +FF+  DV  FSI++HSAPGFV DE TTRS+F YGRQ+SNSIQV 
Sbjct: 66  LFLVRRNLPLDFLWDAFFQNVDVSRFSIYVHSAPGFVLDESTTRSQFLYGRQISNSIQVL 125

Query: 125 WGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDR 184
           WGESSMI AERLLL AALEDPANQRFVLLSDSCVP+YNFSYVY YLM SPRSFVDSFLD 
Sbjct: 126 WGESSMIQAERLLLAAALEDPANQRFVLLSDSCVPLYNFSYVYNYLMVSPRSFVDSFLDA 185

Query: 185 KESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           KE RYNPKMSP IP+ KWRKGSQWIT++R+HAEV+VDD++IF VFKK CK
Sbjct: 186 KEGRYNPKMSPKIPREKWRKGSQWITVVRKHAEVVVDDDVIFSVFKKYCK 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297837193|ref|XP_002886478.1| hypothetical protein ARALYDRAFT_475115 [Arabidopsis lyrata subsp. lyrata] gi|297332319|gb|EFH62737.1| hypothetical protein ARALYDRAFT_475115 [Arabidopsis lyrata subsp. lyrata]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 147/237 (62%), Positives = 178/237 (75%), Gaps = 10/237 (4%)

Query: 7   PKVGRHVLWFSWKLVTFFCIAFSLVALFRLH-------LRYDISSSAVSRTR-SRIHYDG 58
           P   R V+WF WK++T    A  ++ALF  +            SS +V+R+R   + Y G
Sbjct: 5   PSSRRGVVWFRWKILTTLSAALCILALFSFNRHSNSTATTTLSSSLSVARSRIPLVKYSG 64

Query: 59  P-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQL 117
              K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS+FFY RQL
Sbjct: 65  DRPKLAFLFLARRDLPLDFLWDRFFKNADQRNFSIYVHSIPGFVFDESSTRSQFFYNRQL 124

Query: 118 SNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSF 177
            NSIQV WGESSMIAAERLLL +ALEDP NQRFVLLSDSCVP+Y+F Y+Y+YL++SP SF
Sbjct: 125 KNSIQVVWGESSMIAAERLLLASALEDPLNQRFVLLSDSCVPLYDFGYIYRYLVSSPMSF 184

Query: 178 VDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           VDSFLD K+ RY  KM P I K KWRKGSQWI+LIR HAEV+V+D+ +FPVF+K CK
Sbjct: 185 VDSFLD-KDKRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVVVNDDTVFPVFQKFCK 240

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570100|ref|NP_683459.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|49823486|gb|AAT68726.1| hypothetical protein At1g62305 [Arabidopsis thaliana] gi|58743302|gb|AAW81729.1| At1g62305 [Arabidopsis thaliana] gi|60547649|gb|AAX23788.1| hypothetical protein At1g62305 [Arabidopsis thaliana] gi|61656151|gb|AAX49378.1| At1g62305 [Arabidopsis thaliana] gi|332195830|gb|AEE33951.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 182/238 (76%), Gaps = 11/238 (4%)

Query: 7   PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSA--------VSRTR-SRIHYD 57
           P   R V+WF WK++     A  ++ALF ++ + + +++         V+R+R   + Y 
Sbjct: 5   PSSRRGVVWFRWKILITISTALCILALFCINRQSNSTATTTTLSSSLSVARSRIPLVKYS 64

Query: 58  GP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
           G   K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS FFY RQ
Sbjct: 65  GDRPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQ 124

Query: 117 LSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
           L NSI+V WGESSMIAAERLLL +ALEDP+NQRFVLLSDSCVP+Y+F Y+Y+YL++SP+S
Sbjct: 125 LKNSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKS 184

Query: 177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           FVDSFLD K++RY  KM P I K KWRKGSQWI+LIR HAEVIV+D+ +FPVF+K CK
Sbjct: 185 FVDSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCK 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2008890	383	AT1G11940 [Arabidopsis thalian	0.995	0.616	0.574	6.7e-72
TAIR|locus:504956294	378	AT1G62305 [Arabidopsis thalian	0.957	0.600	0.579	8e-69
TAIR|locus:2222637	377	AT5G14550 [Arabidopsis thalian	0.945	0.594	0.489	1.8e-55
TAIR|locus:2027769	418	AT1G73810 [Arabidopsis thalian	0.721	0.409	0.426	9.8e-32
TAIR|locus:2012748	412	AT1G10280 [Arabidopsis thalian	0.738	0.424	0.401	1.8e-30
TAIR|locus:2181442	411	AT5G16170 [Arabidopsis thalian	0.776	0.447	0.414	1.8e-30
TAIR|locus:2197354	651	AT1G10880 [Arabidopsis thalian	0.776	0.282	0.388	3.9e-30
TAIR|locus:2128181	376	AT4G31350 [Arabidopsis thalian	0.708	0.446	0.384	1.6e-29
TAIR|locus:2059040	394	AT2G19160 [Arabidopsis thalian	0.708	0.426	0.395	1.9e-28
TAIR|locus:2165605	388	AT5G57270 [Arabidopsis thalian	0.713	0.435	0.382	5e-28

TAIR|locus:2008890 AT1G11940 [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 143/249 (57%), Positives = 182/249 (73%)

Query:     1 MTKKAAPKV----GRH--VLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
             MTKK+ P++     R   V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct:     1 MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query:    50 TRSRIH-YDGPA-KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
             +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct:    61 SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query:   108 RSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVY 167
             RS++FY RQL+NSI+V WGESSMI            D +NQRFVLLSD C P+Y+F Y+Y
Sbjct:   121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query:   168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
             KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct:   181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query:   228 VFKKCCKVC 236
             VFK+ CK C
Sbjct:   241 VFKEFCKRC 249

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956294 AT1G62305 [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 138/238 (57%), Positives = 172/238 (72%)

Query:     7 PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDIS------SSAVSRTRSRI---HYD 57
             P   R V+WF WK++     A  ++ALF ++ + + +      SS++S  RSRI    Y 
Sbjct:     5 PSSRRGVVWFRWKILITISTALCILALFCINRQSNSTATTTTLSSSLSVARSRIPLVKYS 64

Query:    58 GPA-KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
             G   K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS FFY RQ
Sbjct:    65 GDRPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQ 124

Query:   117 LSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
             L NSI+V WGESSMI            DP+NQRFVLLSDSCVP+Y+F Y+Y+YL++SP+S
Sbjct:   125 LKNSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKS 184

Query:   177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
             FVDSFLD K++RY  KM P I K KWRKGSQWI+LIR HAEVIV+D+ +FPVF+K CK
Sbjct:   185 FVDSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCK 241

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2222637 AT5G14550 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 116/237 (48%), Positives = 159/237 (67%)

Query:     8 KVGRHVLWFSWK------LVTFFCIA-FSLV-ALFR-LHLRYD-ISSSAVSRTRSRIHYD 57
             KV +  L + WK      L+  FC   F  + A F  +  R++ IS+S  S  + R+  D
Sbjct:     4 KVSQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKKPRL--D 61

Query:    58 GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQL 117
                +IAFLF+AR  LPL+F+W +FF+  D + FSI++HS PGFV +E TTRSK+F  RQL
Sbjct:    62 QRPQIAFLFIARNRLPLEFVWDAFFKGEDGK-FSIYVHSRPGFVLNEATTRSKYFLDRQL 120

Query:   118 SNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSF 177
             ++SIQV WGES+MI            D  N RFV LSDSC+P+Y+FSY Y Y+M++P SF
Sbjct:   121 NDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTPTSF 180

Query:   178 VDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
             VDSF D K+SRYNP+M+P IP   WRKGSQW+ L R+HAE++V+D  +FP+F++ C+
Sbjct:   181 VDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCR 237

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0007623 "circadian rhythm" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2027769 AT1G73810 [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 75/176 (42%), Positives = 101/176 (57%)

Query:    61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS 120
             K AF+FL R +LPL  LW  FF+      FSI+IH++  F FD+ T  +  FY R++ + 
Sbjct:   147 KAAFMFLTRGKLPLAKLWERFFK-GHEGLFSIYIHTSDPFYFDDHTPETSPFYRRRIPSK 205

Query:   121 IQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDS 180
              +V WG  SM+            D  N RFVLLS+S +P++NFS +Y YL+ S  S+VD 
Sbjct:   206 -EVGWGMVSMVAAERRLLANALLDAGNHRFVLLSESDIPLFNFSTIYSYLINSQHSYVDV 264

Query:   181 F-LDRK--ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCC 233
             + L       RYN +MSP I +  WRKGSQW  + R  A  +V D   FPVF+K C
Sbjct:   265 YDLPGPAGRGRYNRRMSPVISRTNWRKGSQWFEIDREVALAVVSDTTYFPVFEKYC 320

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2012748 AT1G10280 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 73/182 (40%), Positives = 104/182 (57%)

Query:    56 YDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGR 115
             YD   K+AF+FL R  LP+  LW  FF+  + +  S+++H+ PG+  D   +R   FY R
Sbjct:   138 YDRVPKVAFMFLTRGPLPMLPLWEKFFK-GNEKYLSVYVHTPPGY--DMNVSRDSPFYDR 194

Query:   116 QLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPR 175
             Q+ +  +V WG   +             D +N+RFVLLS+SCVP+YNFS VY YL+ S  
Sbjct:   195 QIPSQ-RVEWGSPLLTDAEKRLLANALLDFSNERFVLLSESCVPVYNFSTVYTYLINSAY 253

Query:   176 SFVDSFLDRKE---SRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKC 232
             SFVDS+ +       RY+ KM P I    WRKGSQW  + R+ A  I+ D   + +FK+ 
Sbjct:   254 SFVDSYDEPTRYGRGRYSRKMLPDIKLHHWRKGSQWFEVNRKIAIYIISDSKYYSLFKQF 313

Query:   233 CK 234
             C+
Sbjct:   314 CR 315

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181442 AT5G16170 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 82/198 (41%), Positives = 109/198 (55%)

Query:    43 SSSAVSRTRSRIHYDGP--AKIAFLFLARRELPLDFLWGSFFEIADVENF-SIFIHSAPG 99
             SSS + R   R + DG    K+AF+F+    LPL  LW  FFE    E F SI++H+ P 
Sbjct:   119 SSSWLGR---RHNNDGKMAVKVAFMFMTGGRLPLAGLWEKFFE--GHEGFYSIYVHTNPS 173

Query:   100 FVFDELTTRSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVP 159
             F  D     S  FY R++ +   V WG SSM+            D +NQRFVLLSDSC+P
Sbjct:   174 FQ-DSFPETS-VFYSRRIPSQ-PVYWGTSSMVDAEKRLLANALLDESNQRFVLLSDSCIP 230

Query:   160 IYNFSYVYKYLMASPRSFVDSFLDRKES---RYNPKMSPTIPKGKWRKGSQWITLIRRHA 216
             +YNF+ +Y YL  +  SF+ SF D ++S   RYN  M P I    WRKGSQW    R  A
Sbjct:   231 LYNFTTIYDYLTGTNLSFIGSFDDPRKSGRGRYNHTMYPHINITHWRKGSQWFETTRELA 290

Query:   217 EVIVDDEIIFPVFKKCCK 234
               I++D + + +F + CK
Sbjct:   291 LHIIEDTVYYKIFDQHCK 308

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2197354 AT1G10880 [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 3.9e-30, P = 3.9e-30
 Identities = 75/193 (38%), Positives = 107/193 (55%)

Query:    46 AVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENF-SIFIHSAPGFVFDE 104
             A    RS +  +   K+AF+FL R  LPL  LW  FF+    E F SI++H++P F  + 
Sbjct:   103 AAMAPRSPMKNETHPKVAFMFLTRWNLPLSPLWEMFFK--GHEGFYSIYVHTSPEFTQEP 160

Query:   105 LTTRSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFS 164
                 S  FY +++ +   V WG+ SM+            +P+N RFVLLS++C+P++NF+
Sbjct:   161 --PESSVFYKKRIPSKA-VEWGKCSMMDAEKRLISHALLEPSNARFVLLSETCIPLFNFT 217

Query:   165 YVYKYLMASPRSFVDSFLDRK---ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVD 221
              +Y YL  S RSF+ SF D +     RY PKM P +    WRKG+QW  + RR A  IV 
Sbjct:   218 TIYTYLTRSTRSFLGSFDDPRPMGRGRYTPKMLPHVSLSDWRKGNQWFEISRRVAAEIVS 277

Query:   222 DEIIFPVFKKCCK 234
             D   + VFK  C+
Sbjct:   278 DRRYYAVFKDHCR 290

GO:0005634 "nucleus" evidence=ISM

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2128181 AT4G31350 [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 68/177 (38%), Positives = 103/177 (58%)

Query:    61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS 120
             K+AF+FL    LP + LW  FF       FS+++H++       + T S +F GR + +S
Sbjct:    89 KLAFMFLTPGTLPFEPLWEMFFR-GHENKFSVYVHASKK---SPVHT-SSYFVGRDI-HS 142

Query:   121 IQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDS 180
              +VAWG+ SM+            DP NQ F+LLSDSCVP+++F+Y+Y +L+ +  SF+D 
Sbjct:   143 HKVAWGQISMVDAERRLLAHALVDPDNQHFILLSDSCVPLFDFNYIYNHLIFANLSFIDC 202

Query:   181 FLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
             F D       RY+  M P + K  +RKGSQW ++ RRHA V++ D + +  FK  C+
Sbjct:   203 FEDPGPHGSGRYSQHMLPEVEKKDFRKGSQWFSMKRRHAIVVMADSLYYTKFKLYCR 259

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2059040 AT2G19160 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 70/177 (39%), Positives = 99/177 (55%)

Query:    60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSN 119
             +KIAF+FL    LP + LW  FF+      FS++IH++     D     S++F  R++  
Sbjct:   105 SKIAFMFLTPGTLPFEKLWDLFFQ-GHEGKFSVYIHASK----DTPVHTSRYFLNREI-R 158

Query:   120 SIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVD 179
             S +V WG  SMI            DP NQ+FVLLSDSCVP+ +F Y+Y Y+M S  S+VD
Sbjct:   159 SDEVVWGRISMIDAERRLLTNALRDPENQQFVLLSDSCVPLRSFEYMYNYMMHSNVSYVD 218

Query:   180 SFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCC 233
              F D       R+   M P IP+  +RKG+QW ++ R+HA V V D + +  F+  C
Sbjct:   219 CFDDPGPHGTGRHMDHMLPEIPREDFRKGAQWFSMKRQHAVVTVADNLYYSKFRDYC 275

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165605 AT5G57270 [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 68/178 (38%), Positives = 100/178 (56%)

Query:    60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSN 119
             +KIAF+FL    LP + LW  FF+      FSI+IH  P  +       S+ F  R++ +
Sbjct:    97 SKIAFMFLTPGTLPFEKLWDKFFQ-GQEGRFSIYIH--PSRL--RPVHISRHFSDREI-H 150

Query:   120 SIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVD 179
             S  V WG  SM+            DP NQ FVLLS+SC+P++ F Y Y+YLM +  SF+D
Sbjct:   151 SDHVTWGRISMVDAERRLLANALEDPDNQHFVLLSESCIPLHTFDYTYRYLMHANVSFID 210

Query:   180 SFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
             SF D       R+   M P IP+  +RKG+QW T+ R+HA +++ D + +  F++ C+
Sbjct:   211 SFEDLGPHGTGRHMDHMLPEIPRQDFRKGAQWFTMKRQHAVIVMADGLYYSKFREYCR 268

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006882001 SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (380 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	237
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	6e-55

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  175 bits (447), Expect = 6e-55
 Identities = 77/190 (40%), Positives = 102/190 (53%), Gaps = 16/190 (8%)

Query: 62  IAFLFLA-RRELPLDFLWGSFFEIADVEN-FSIFIHS-APGFVFDELTTR-SKFFYGRQL 117
           IAF+FL  + +LP   LW  FF     +N + I++ + +P    + L    S FF  R +
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHP--QNLYCIYVDAKSPSEFKERLRALASCFFNVRVI 58

Query: 118 SNSIQVAWGESSMIAAERLLLEAALE-DPANQRFVLLSDSCVPIYNFSYVYKYLMASPR- 175
             S  V WG  SM+ AER LL   L  DP+   FVLLS+S +P+  F  +Y+YL +    
Sbjct: 59  PKSEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGN 118

Query: 176 -SFVDSFLD--RKES-RYNPKMSPTIPK----GKWRKGSQWITLIRRHAEVIVDDEIIFP 227
            SFV+SF D   K   RYNP+M P I       KWRKGSQW  L R  AE +V D + +P
Sbjct: 119 NSFVESFDDPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAFAEYVVSDNLYYP 178

Query: 228 VFKKCCKVCS 237
           +FK  C  C 
Sbjct: 179 LFKYYCNTCY 188

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.88

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=1.6e-37  Score=291.22  Aligned_cols=171  Identities=16%  Similarity=0.162  Sum_probs=134.3

Q ss_pred             CCCceEEEEEEeC-CCCChHHHHHHHHhhhcCCCeeEEEEeCCCCCccc------c-------ccCCcceeceecCCcce
Q 026505           57 DGPAKIAFLFLAR-RELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE------L-------TTRSKFFYGRQLSNSIQ  122 (237)
Q Consensus        57 ~~~~KiAfLIlah-~~~~~~~l~~rl~~~ld~~~~~iyIHvD~k~~~~~------~-------~~~~~vf~~r~i~~r~~  122 (237)
                      ..++||||||++| ++.+|   ++||++++|+++++||||+|+|++..+      .       ...+||+   ++.++..
T Consensus        75 ~~~~r~AYLI~~h~~d~~~---l~RLL~aLYhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~---vl~k~~~  148 (421)
T PLN03183         75 DKLPRFAYLVSGSKGDLEK---LWRTLRALYHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVY---MITKANL  148 (421)
T ss_pred             CCCCeEEEEEEecCCcHHH---HHHHHHHhcCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEE---EEeccee
Confidence            3579999999999 66788   999999999999999999999986421      0       1245676   5678899


Q ss_pred             eecCcccHHHHHHHHHHHHhc-CCCCCEEEEecCCCccCCChHH-HHHHHhcCC-CCceeccccC---CCCccCCC----
Q 026505          123 VAWGESSMIAAERLLLEAALE-DPANQRFVLLSDSCVPIYNFSY-VYKYLMASP-RSFVDSFLDR---KESRYNPK----  192 (237)
Q Consensus       123 V~WGg~SlV~Atl~Ll~~Al~-~~~~~~f~LLSGsD~PL~s~~~-I~~fL~~~~-~~FI~~~~~~---~~~Ry~~~----  192 (237)
                      |.|||+|||+|||++|+.+++ ..+|||||+|||+||||+++++ |+.|+..++ +|||++..+.   ...|+.+.    
T Consensus       149 V~WGG~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~p  228 (421)
T PLN03183        149 VTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDP  228 (421)
T ss_pred             eccCChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecC
Confidence            999999999999999999998 4789999999999999999999 577777754 9999975432   11122110    


Q ss_pred             ----------CC----CCC-CCCccccccceeeccHHHHHHhhc--C--cccHHHhcccc
Q 026505          193 ----------MS----PTI-PKGKWRKGSQWITLIRRHAEVIVD--D--EIIFPVFKKCC  233 (237)
Q Consensus       193 ----------~~----p~i-~~~~~~~GSqW~sLtR~~aeyIl~--d--~~i~~~F~~~c  233 (237)
                                +.    ..+ .+.++++||||++|||++|+||++  |  +.++.+|.+.|
T Consensus       229 gl~~~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~~~t  288 (421)
T PLN03183        229 GLYSTNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNF  288 (421)
T ss_pred             ceeecccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHHhcC
Confidence                      00    012 357899999999999999999996  2  46666666643

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=8.8e-39  Score=278.81  Aligned_cols=166  Identities=29%  Similarity=0.463  Sum_probs=109.9

Q ss_pred             EEEEEEeCC-CCChHHHHHHHHhhhcCCCeeEEEEeCCCCCc---cc----cccCCcceeceecCCcceeecCcccHHHH
Q 026505           62 IAFLFLARR-ELPLDFLWGSFFEIADVENFSIFIHSAPGFVF---DE----LTTRSKFFYGRQLSNSIQVAWGESSMIAA  133 (237)
Q Consensus        62 iAfLIlah~-~~~~~~l~~rl~~~ld~~~~~iyIHvD~k~~~---~~----~~~~~~vf~~r~i~~r~~V~WGg~SlV~A  133 (237)
                      |||||+||+ +++|   ++++++.++++++.||||+|+|++.   ++    ....++++   ++++|++|.|||+|||+|
T Consensus         1 iAylil~h~~~~~~---~~~l~~~l~~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~---~v~~r~~v~WG~~S~v~A   74 (244)
T PF02485_consen    1 IAYLILAHKNDPEQ---LERLLRLLYHPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVH---FVPKRVDVRWGGFSLVEA   74 (244)
T ss_dssp             EEEEEEESS--HHH---HHHHHHHH--TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEE---E-SS-----TTSHHHHHH
T ss_pred             CEEEEEecCCCHHH---HHHHHHHhcCCCCEEEEEEcCCCChHHHHHHHHhcccCCcee---ecccccccccCCccHHHH
Confidence            799999988 7777   9999999999999999999999641   11    12334554   788899999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEecCCCccCCChHHHHHHHhcC-C-CCceeccccCCC---CccCCC----CCCCCCCCccc
Q 026505          134 ERLLLEAALE-DPANQRFVLLSDSCVPIYNFSYVYKYLMAS-P-RSFVDSFLDRKE---SRYNPK----MSPTIPKGKWR  203 (237)
Q Consensus       134 tl~Ll~~Al~-~~~~~~f~LLSGsD~PL~s~~~I~~fL~~~-~-~~FI~~~~~~~~---~Ry~~~----~~p~i~~~~~~  203 (237)
                      |+.||++|++ +++|+|||+|||+|+||+|+++|++||+++ + .+|++++..+..   .||.+.    +.+.+...+++
T Consensus        75 ~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~~~f~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   75 TLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGDNNFIESFSDEDPRESGRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT--B---BEE--GGGG-HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCCCcceecccccccchhhcceeeeeeeccccccccccc
Confidence            9999999999 789999999999999999999999999997 3 788987654321   455433    11222223899


Q ss_pred             cccceeeccHHHHHHhhcCcccHHHhcccc
Q 026505          204 KGSQWITLIRRHAEVIVDDEIIFPVFKKCC  233 (237)
Q Consensus       204 ~GSqW~sLtR~~aeyIl~d~~i~~~F~~~c  233 (237)
                      +|||||+|||++|+||++|++..+.++++|
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~  184 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYF  184 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhh
Confidence            999999999999999998876666666554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.88  E-value=2.7e-22  Score=190.11  Aligned_cols=157  Identities=19%  Similarity=0.181  Sum_probs=126.1

Q ss_pred             eEEEEEEeCCCCChHHHHHHHHhhhcCCCeeEEEEeCCCCCcc--cc-----ccCCcceeceecCCcceeecCcccHHHH
Q 026505           61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--EL-----TTRSKFFYGRQLSNSIQVAWGESSMIAA  133 (237)
Q Consensus        61 KiAfLIlah~~~~~~~l~~rl~~~ld~~~~~iyIHvD~k~~~~--~~-----~~~~~vf~~r~i~~r~~V~WGg~SlV~A  133 (237)
                      =+||+.++|++.++   ++|+++++++|++.++||+|+++...  ..     ...+||+   +++++..|.|||.|+++|
T Consensus       104 ~~a~~~~v~kd~~~---verll~aiYhPqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~---v~~k~~~v~~~G~s~l~a  177 (439)
T KOG0799|consen  104 PAAFLRVVYKDYEQ---VERLLQAIYHPQNVYCIHVDAKSPPEFRVAMQQLASCFPNVI---VLPKRESVTYGGHSILAA  177 (439)
T ss_pred             ceEEEEeecccHHH---HHHHHHHHhCCcCcceEEECCCCCHHHHHHHHHHHhcCCceE---EeccccceecCCchhhHH
Confidence            46788888999999   99999999999999999999998632  11     1234554   456799999999999999


Q ss_pred             HHHHHHHHhcC-CCCCEEEEecCCCccCCChHHHHHHHhc-CCCCceeccccC--CCCc--c-C---C--------CCCC
Q 026505          134 ERLLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMA-SPRSFVDSFLDR--KESR--Y-N---P--------KMSP  195 (237)
Q Consensus       134 tl~Ll~~Al~~-~~~~~f~LLSGsD~PL~s~~~I~~fL~~-~~~~FI~~~~~~--~~~R--y-~---~--------~~~p  195 (237)
                      ++++|+.+++. ++|+||++|||+|+||+|+.|+.+.|+. ++.|||+.....  ...|  + .   +        .+.+
T Consensus       178 ~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g~N~i~~~~~~~~~~~~~~k~~~~~~~~~~~~s~~~~~  257 (439)
T KOG0799|consen  178 HLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRGANFVEHTSEIGWKLNRKAKWDIIDLKYFRNKSPLPWV  257 (439)
T ss_pred             HHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCCcccccCcccccHHHhcccCCcccccchheecCCCccc
Confidence            99999999995 5799999999999999999999999998 779999974322  1111  1 0   0        0111


Q ss_pred             CC-CCCccccccceeeccHHHHHHhhcCc
Q 026505          196 TI-PKGKWRKGSQWITLIRRHAEVIVDDE  223 (237)
Q Consensus       196 ~i-~~~~~~~GSqW~sLtR~~aeyIl~d~  223 (237)
                      .+ .+.++++||.|++|+|++|+|++.++
T Consensus       258 ~lp~~~ki~~Gs~~~~LsR~fv~y~i~~~  286 (439)
T KOG0799|consen  258 ILPTALKLFKGSAWVSLSRAFVEYLISGN  286 (439)
T ss_pred             cCCCceEEEecceeEEEeHHHHHHHhcCc
Confidence            23 46889999999999999999999964

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	237
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	2e-15
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score = 73.3 bits (179), Expect = 2e-15
 Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 27/211 (12%)

Query: 50  TRSRIHYDGPAKIAFLFLARRELP-LDFLWGSFFEIADVENFSIFIH---SAPGFVFDEL 105
                  +    IA+  +   ++  LD L  +   I   +NF   IH    A       +
Sbjct: 74  VEPLTKEEVGFPIAYSIVVHHKIEMLDRLLRA---IYMPQNF-YCIHVDRKAEESFLAAV 129

Query: 106 TTRSKFFYG-RQLSNSIQVAWGESSMIAAERLLLEAALEDPAN-QRFVLLSDSCVPIYNF 163
              +  F      S    V +   + + A+   ++      AN +  + L     PI   
Sbjct: 130 QGIASCFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTN 189

Query: 164 SYVYKYLMASPR-SFVDSF----------------LDRKESRYNPKMSPTIPKGKWRKGS 206
             + + L  S   + +++                 +D K +      +P   K     GS
Sbjct: 190 LEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGS 249

Query: 207 QWITLIRRHAEVIVDDEIIFPVFKKCCKVCS 237
            +  + R +   ++++E I  + +      S
Sbjct: 250 AYFVVTREYVGYVLENENIQKLMEWAQDTYS 280

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 4e-04
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 29/171 (16%)

Query: 74  LDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAA 133
           L  +W    +  DV      +H     V  +    +       L   +++     +  A 
Sbjct: 392 LSLIWFDVIKS-DVMVVVNKLHKY-SLVEKQPKESTISIPSIYLELKVKL----ENEYAL 445

Query: 134 ERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYL---MAS----------PRSFVD- 179
            R +++       N      SD  +P Y   Y Y ++   + +             F+D 
Sbjct: 446 HRSIVDHY-----NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500

Query: 180 SFLDRK----ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIF 226
            FL++K     + +N   S      + +    +I       E +V+  + F
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=2.1e-38  Score=294.71  Aligned_cols=175  Identities=11%  Similarity=0.095  Sum_probs=139.0

Q ss_pred             CCCceEEEEEEeCCCCChHHHHHHHHhhhcCCCeeEEEEeCCCCCcc--ccc-cCCcceece-ecCCcceeecCcccHHH
Q 026505           57 DGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--ELT-TRSKFFYGR-QLSNSIQVAWGESSMIA  132 (237)
Q Consensus        57 ~~~~KiAfLIlah~~~~~~~l~~rl~~~ld~~~~~iyIHvD~k~~~~--~~~-~~~~vf~~r-~i~~r~~V~WGg~SlV~  132 (237)
                      ++++||||||++|+++++   |+||+++++++++.||||+|+|++..  +.. .....|.|. ++++|+.|.|||+|||+
T Consensus        81 e~~~kiAflil~h~d~~~---l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg~S~v~  157 (391)
T 2gak_A           81 EVGFPIAYSIVVHHKIEM---LDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYASWTRVK  157 (391)
T ss_dssp             HHTSCEEEEEEECSCHHH---HHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTSHHHHH
T ss_pred             ccCCCEEEEEEecCCHHH---HHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCCchHHH
Confidence            456899999999999888   99999999999999999999998632  111 111223333 34689999999999999


Q ss_pred             HHHHHHHHHhcC-CCCCEEEEecCCCccCCChHHHHHHHhc-CCCCceeccccCC--CCccC--CC-----C-----C-C
Q 026505          133 AERLLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMA-SPRSFVDSFLDRK--ESRYN--PK-----M-----S-P  195 (237)
Q Consensus       133 Atl~Ll~~Al~~-~~~~~f~LLSGsD~PL~s~~~I~~fL~~-~~~~FI~~~~~~~--~~Ry~--~~-----~-----~-p  195 (237)
                      ||++||+.||++ .+|+|||||||+|+||+|+++|++||+. +++|||+++.+++  .+|+.  ..     +     . .
T Consensus       158 A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l~~~~~~k~  237 (391)
T 2gak_A          158 ADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKA  237 (391)
T ss_dssp             HHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGGSHHHHEEEEEETTEEEEEEEECC
T ss_pred             HHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCcccccceEeeeeccccceeeeccccc
Confidence            999999999985 5999999999999999999999999998 5799999876542  34422  10     0     0 1


Q ss_pred             CCC-CCccccccceeeccHHHHHHhhcCc---ccHHHhccccc
Q 026505          196 TIP-KGKWRKGSQWITLIRRHAEVIVDDE---IIFPVFKKCCK  234 (237)
Q Consensus       196 ~i~-~~~~~~GSqW~sLtR~~aeyIl~d~---~i~~~F~~~c~  234 (237)
                      .+| +.++++|||||+|||++|+||++|.   ++.+.|+..|.
T Consensus       238 ~~P~~~~~~~GSqW~~LtR~~v~~vl~d~~~~~~~~~~k~t~~  280 (391)
T 2gak_A          238 PPPLKTPLFSGSAYFVVTREYVGYVLENENIQKLMEWAQDTYS  280 (391)
T ss_dssp             CCSCSSCCEECCSCCEEEHHHHHHHHHCHHHHHHHHHHTTSSS
T ss_pred             CCccccceecccceeEecHHHHHHHHhCCcHHHHHHHHcCCcC
Confidence            123 5789999999999999999999973   66666776664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	89.69

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=89.69  E-value=1.9  Score=33.29  Aligned_cols=109  Identities=11%  Similarity=0.142  Sum_probs=61.7

Q ss_pred             ceEEEEEEeCCCCChHHHHHHHHhhh---cCCCeeEEEEeCCCCCc-----cccccCCcceeceecCCccee---ecCcc
Q 026505           60 AKIAFLFLARRELPLDFLWGSFFEIA---DVENFSIFIHSAPGFVF-----DELTTRSKFFYGRQLSNSIQV---AWGES  128 (237)
Q Consensus        60 ~KiAfLIlah~~~~~~~l~~rl~~~l---d~~~~~iyIHvD~k~~~-----~~~~~~~~vf~~r~i~~r~~V---~WGg~  128 (237)
                      ||+..+|-+++....   +++.++++   ..+++.|+|.-|...+-     ++......+   +.+......   .=...
T Consensus         1 P~vSiiip~yN~~~~---l~~~l~Si~~Qt~~~~eiivvdd~S~d~t~~~l~~~~~~~~i---~~~~~~~~~~~~~~~~~   74 (255)
T d1qg8a_           1 PKVSVIMTSYNKSDY---VAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRV---RFYQSDISGVKERTEKT   74 (255)
T ss_dssp             CCEEEEEEESSCTTT---HHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTE---EEEECCCCSHHHHHSSC
T ss_pred             CEEEEEEecCCCHHH---HHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHhhhhccc---ccccccccccccccccc
Confidence            689999999998776   66666664   34678999998866531     111111111   111111100   00223


Q ss_pred             cHHHHHHHHHHHHhcCCCCCEEEEecCCCccCCC-hHHHHHHHhcCC-CCce
Q 026505          129 SMIAAERLLLEAALEDPANQRFVLLSDSCVPIYN-FSYVYKYLMASP-RSFV  178 (237)
Q Consensus       129 SlV~Atl~Ll~~Al~~~~~~~f~LLSGsD~PL~s-~~~I~~fL~~~~-~~FI  178 (237)
                      +.-.|-=.+++.|    ..+|+.+|-+.|++..+ .+.+.+++.+++ ..++
T Consensus        75 g~~~a~N~gi~~a----~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v  122 (255)
T d1qg8a_          75 RYAALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVI  122 (255)
T ss_dssp             HHHHHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEE
T ss_pred             hhccccccccccc----ccccccccccccccccchHHHHHHHHHhCCCCCeE
Confidence            3333433444444    46899999999999755 344556666654 4555