Citrus Sinensis ID: 026507

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MATSVEANKPEPATGYPVTYAYAAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRVEM
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccEEEEEEEEEEEcccccccccEEEEEEEEEEEEEcccEEEEEEEcEEEEEEEccEEEEEccccccccccccEEEEEEEEEEccccccHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccEEEEEcccccccccccccccccEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEcccccccEEEEEEEEEEEEccccEEEEEEEEEEEEEEEccEEEEccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEccEEEEEEccEEEEEccccccccccccEcccccEEcc
Coil and Loop (DISEMBL)
matsveankpepatgypvtyayaapppqpqvaptnrspfrLASFWSRLLCRLFLVVIVIISIMAVASFATWlilkpefpefrvdsasiAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGeweldstllppfsqekgnetRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGvkigvsndggtagdlvgqvrpcrvem
Flexible Loop (DISEMBL)
matsveankpepatgYPVTYAYAAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQlnttsanstMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEkerargevefgigvygwVRYKARWWSMRWRFMNVYCNGVKIgvsndggtagdlvgqvrpcrvem
Low Complexity Region (SEG)
MATSVEANKPEpatgypvtyayaapppqpqvaptNRSPFRLASFWSRLLCRLFLvviviisimavasFATWLILKPEFPEFRVDSASIAQLnttsanstmtatWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRVEM
Disordered region (IsUnstruct)
*****************VTYAY****************FRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFS****NETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQ********
Disordered Region (DISOPRED)
********************************************WSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGV*************VRPCRVEM
Disordered Region (DISEMBL)
*********PEPATGYPVTYAYAAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRVEM
Disordered Region (DISPRO)
*****************VTYAYAAPPPQP*******SPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSND*GT*GDLVGQVRPCRV**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATSVEANKPEPATGYPVTYAYAAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRVEM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	237	2.2.26 [Sep-21-2011]
Q8VZ13	221	Uncharacterized protein A	no	no	0.628	0.674	0.241	1e-09

>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 4/153 (2%)

Query: 70  TWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVL 129
           T+L L+P+   + V++AS+ +    + +  + A +   ++  NP + +++ Y+++  +  
Sbjct: 58  TYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTA 117

Query: 130 YGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESV--ARGIEKERARGEVEFGIGV 187
           +    +    + PF Q   NETR+  Q  L+S  V  S   AR +  E+++G +E  + +
Sbjct: 118 HHNQSVAHKNISPFKQRPKNETRIETQ--LVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query: 188 YGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDG 220
              V YK   +  R R +   C  V I V++  
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
224054468	248	predicted protein [Populus trichocarpa]	0.949	0.907	0.333	5e-28
225464826	239	PREDICTED: uncharacterized protein LOC10	0.835	0.828	0.333	8e-27
449530299	248	PREDICTED: uncharacterized protein At1g0	0.945	0.903	0.332	3e-26
449445007	243	PREDICTED: uncharacterized protein At1g0	0.789	0.769	0.334	6e-24
356550082	271	PREDICTED: uncharacterized protein LOC10	0.886	0.774	0.327	4e-23
356554941	203	PREDICTED: uncharacterized protein At1g0	0.852	0.995	0.302	1e-22
116781685	244	unknown [Picea sitchensis]	0.755	0.733	0.327	2e-22
255565765	239	conserved hypothetical protein [Ricinus	0.928	0.920	0.284	3e-20
18401372	243	late embryogenesis abundant hydroxyproli	0.869	0.847	0.295	9e-19
356546690	203	PREDICTED: uncharacterized protein At1g0	0.843	0.985	0.299	1e-18

>gi|224054468|ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|222845533|gb|EEE83080.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 6   EANKPEPATGYPVT--------------YAYAAPPPQPQVAP----TNRS-PFRLASFWS 46
            ++   PATGYP                Y Y APPP     P    TN++ P + A F  
Sbjct: 3   SSDPSRPATGYPFVPNGLHHPPPPAGSAYPYQAPPPHQPTYPYTYNTNQTYPNQRAIFLR 62

Query: 47  RLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQL 106
           RL+  L +   +  +I+    F  WL+++P FPEFRV S SI+  N +S++S++T TW  
Sbjct: 63  RLIIALIIFTGIFFTIL----FICWLVIRPHFPEFRVTSLSISNFNVSSSSSSVTGTWNA 118

Query: 107 SLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGE 166
             +V NPN+K+ + YN ++ ++ Y    L  T +PPF Q K N T +  + G  S Y+GE
Sbjct: 119 RFQVSNPNKKMKISYNEIQTSIFYKSEFLSQTRIPPFRQGKRNVTDIDVEYGATSSYIGE 178

Query: 167 SVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDL 226
                I  +  R  V F + +     +K   +  R R + VYCN V +G S + G +G+L
Sbjct: 179 RTVNQINSDEGRRLVSFNLRIVADAGFKVEGFWARRRLLRVYCNDVAVGTSGN-GRSGNL 237

Query: 227 VGQVRPCRV 235
            G    C V
Sbjct: 238 TGGAVRCSV 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464826|ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 12/210 (5%)

Query: 28  QPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSAS 87
            P  AP   SP   A+F  R L  +    I++ +I+    F  WL+L+P  P F V SAS
Sbjct: 42  HPYHAPPYSSP--RATFLRRFLAAMIAFFIIVGTII----FIVWLVLRPRLPYFSVASAS 95

Query: 88  IAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEK 147
           ++  N ++  S ++  W +S  VRNPN+K+++ Y+ +E+++ Y    L  T + PF Q  
Sbjct: 96  LSSFNVSA--SQLSGEWNISFDVRNPNKKISISYDRIESSIAYKSATLSQTTIAPFYQGT 153

Query: 148 GNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNV 207
            NET +      +  YV       I  ER RG V F + V+  V +K+  W  R RF++ 
Sbjct: 154 KNETTVTATFAAIGAYVD---VLAINAERTRGSVSFTVKVFARVSFKSGVWKARSRFLSA 210

Query: 208 YCNGVKIGVSNDGGTAGDLVGQVRPCRVEM 237
            CN + +G+ ++  + G LVG  R CRV +
Sbjct: 211 QCNDIALGLPSN-ASRGSLVGGSRECRVGL 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530299|ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 26/250 (10%)

Query: 7   ANKPEPATGYPV-----------------TYAYAAPPPQPQVAPTNRS-PFRLASFWSRL 48
           A+   P TGYP                   Y YAAPP      PT  + P+      +RL
Sbjct: 2   ADPSRPVTGYPAYPNGRPPPPPNSHPQAQAYPYAAPP---YSYPTQYANPYDSTHHNARL 58

Query: 49  --LCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQL 106
             L  L   +IV+  I AV  F  WL+L+P+ PEFRVDS  +   +T  A  T++A+W +
Sbjct: 59  SFLRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFST--AAKTLSASWFI 116

Query: 107 SLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGE 166
              V NPN+K+ + Y+ +++ + Y    L  T +PPF+QEK  ++ ++     LS YV  
Sbjct: 117 GFSVFNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEA 176

Query: 167 SVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGV-KIGVSNDGGTAGD 225
           S    I  +R RG ++F +G+   V ++A WW  R R + V C  +     S++   +G 
Sbjct: 177 SSLNKINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGK 236

Query: 226 LVGQVRPCRV 235
           L+G+ R CRV
Sbjct: 237 LIGESRACRV 246

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445007|ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 25/212 (11%)

Query: 7   ANKPEPATGYPV-----------------TYAYAAPPPQPQVAPTNRS-PFRLASFWSRL 48
           A+   P TGYP                   Y YAAPP      PT  + P+      +RL
Sbjct: 2   ADPSRPVTGYPAYPNGRPPPPPNSHPQAQAYPYAAPP---YSYPTQYANPYDSTHHNARL 58

Query: 49  --LCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQL 106
             L  L   +IV+  I AV  F  WL+L+P+ PEFRVDS  +   +T  A  T++A+W +
Sbjct: 59  SFLRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFST--AAKTLSASWFI 116

Query: 107 SLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGE 166
              V NPN+K+ + Y+ +++ + Y    L  T +PPF+QEK  ++ ++     LS YV  
Sbjct: 117 GFSVFNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEA 176

Query: 167 SVARGIEKERARGEVEFGIGVYGWVRYKARWW 198
           S    I  +R RG ++F +G+   V ++A WW
Sbjct: 177 SSLNKINDDRRRGTIKFNVGISARVGFRAGWW 208

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550082|ref|XP_003543419.1| PREDICTED: uncharacterized protein LOC100780672 [Glycine max]

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 13/223 (5%)

Query: 14  TGYPVTYAYAAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIM-AVASFATWL 72
           TGYP    YAA   Q Q   T   P R  S+ SR   R F   ++ ++++  V    TWL
Sbjct: 59  TGYP----YAA---QQQYYNTTYPPPR--SYASRSFFRAFFATMICLAVVFGVVLIITWL 109

Query: 73  ILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGE 132
           +L+P  P F + S S++ L++TS   +++ATW LS  VRN N+K+ + YN L +++ Y +
Sbjct: 110 VLRPSLPHFTLHSLSVSNLSSTS--QSLSATWHLSFLVRNGNKKMTVSYNALRSSIFYRQ 167

Query: 133 WELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVR 192
             +  + L PF Q+  ++T L+        Y+   +   +  ER    V F + V     
Sbjct: 168 NYISESQLAPFRQDTRSQTTLNATLTAAGTYLEPKLIDNLNAERNASSVLFDVQVVAATS 227

Query: 193 YKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRV 235
           +++  W  R R + V C  V +GVS+   ++GDLVG  R C+V
Sbjct: 228 FRSGSWRFRTRVLKVLCRKVPVGVSS-KSSSGDLVGGDRECQV 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554941|ref|XP_003545799.1| PREDICTED: uncharacterized protein At1g08160-like [Glycine max]

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 13/215 (6%)

Query: 23  AAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFR 82
           A PP Q      N+ P R     S LL  + + ++ +I ++ +A    WL+LKP+  E+ 
Sbjct: 2   AHPPSQSNSTAANK-PKR-----SNLLHYIAMFIVALIILVGIAVIIIWLVLKPKRLEYS 55

Query: 83  VDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPP 142
           V++A+I   N T AN  + A +  ++R  NPN ++++ Y+T+E +V Y +  L +  + P
Sbjct: 56  VENAAIHNFNLTDANH-LYANFDFTIRSYNPNSRISIYYDTVEVSVRYEDQTLATNAVQP 114

Query: 143 FSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRW 202
           F Q   N TRLH      S  + ESV + +  ER+ G++E  + V   +R+K   W  R 
Sbjct: 115 FFQSHKNVTRLHVALTAQSVALYESVPKDLRLERSSGDIELDVWVRARIRFKVGAWKSRH 174

Query: 203 RFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRVEM 237
           R + ++C+ V +  S           +  PC VE+
Sbjct: 175 RVLRIFCSPVLVHFSKGKS------FERAPCEVEL 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116781685|gb|ABK22201.1| unknown [Picea sitchensis]

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 104/186 (55%), Gaps = 7/186 (3%)

Query: 53  FLVVIVIISIMA-VASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVR 111
           FL +IV ++++A +    TWL L+P+ P+F V++ +++QLN   ANS + AT Q ++ VR
Sbjct: 65  FLSIIVTLAVIAGIGILITWLALRPQRPKFHVENVTVSQLNV--ANSELNATMQFNISVR 122

Query: 112 NPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARG 171
           NPN+K+ + Y+++ A  +Y   ++ S  LP F Q   N T L +     S  +   V+R 
Sbjct: 123 NPNKKIGIYYDSIVARAIYRREKIGSNQLPVFYQGHKNTTVLSYPLSADSLPLNTGVSRN 182

Query: 172 IEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVR 231
           +  ++A G V+  + V  WV +K   W+ R   M+V+C+   + V  +G   G L  Q +
Sbjct: 183 LLADKALGSVDMTVNVDAWVHFKVGSWTTRHHLMSVFCD---VTVHWNGSATGRL-SQSK 238

Query: 232 PCRVEM 237
            C + M
Sbjct: 239 GCDLYM 244

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565765|ref|XP_002523872.1| conserved hypothetical protein [Ricinus communis] gi|223536960|gb|EEF38598.1| conserved hypothetical protein [Ricinus communis]

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 12/232 (5%)

Query: 12  PATGYPVTYAYA--------APPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIM 63
           P TGYP   +          APPP       +++P  L  + + LL R+   +IV   + 
Sbjct: 10  PVTGYPAPTSQHPFPNGNPYAPPPTNLYYYNHQTPTPL--YRTTLLRRIIAAIIVATVLF 67

Query: 64  AVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNT 123
                  WL+++P  P+F + S SI+  N ++++  +TA W    +V NPN+KL + Y+ 
Sbjct: 68  FTIFLICWLVIRPHRPQFHITSFSISNFNISASSQRLTANWNARFQVYNPNKKLKISYDN 127

Query: 124 LEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEF 183
           +  ++L     L  T +PP  Q+  N T L      L  YV + V + I    AR  + F
Sbjct: 128 IVCSLLLKSELLSQTRIPPLYQDTKNLTSLDASFSALDTYVDDRVLKDINA--ARPTLAF 185

Query: 184 GIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRV 235
            + +   V +K   +  R R + V+C+ V + +S+    +G+L G  R C+V
Sbjct: 186 NVRLMADVGFKVGGFRARHRLLRVWCDNVPLSLSSATSGSGNLTGGSRECKV 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401372|ref|NP_565642.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|13272403|gb|AAK17140.1|AF325072_1 unknown protein [Arabidopsis thaliana] gi|5306271|gb|AAD42003.1| expressed protein [Arabidopsis thaliana] gi|15146320|gb|AAK83643.1| At2g27260/F12K2.16 [Arabidopsis thaliana] gi|20147333|gb|AAM10380.1| At2g27260/F12K2.16 [Arabidopsis thaliana] gi|330252871|gb|AEC07965.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 24/230 (10%)

Query: 10  PEPATGYPVTYA----YAAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAV 65
           P PA G    Y     Y AP P P+                 ++ RLF+V    + ++ +
Sbjct: 31  PNPAAGTAYPYQNHNPYYAPQPNPRAV---------------IIRRLFIVFTTFLLLLGL 75

Query: 66  ASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLE 125
             F  +LI++P+ P+  ++S S++  N +  N+ ++  W L L+ RNPN K++L Y T  
Sbjct: 76  ILFIFFLIVRPQLPDVNLNSLSVSNFNVS--NNQVSGKWDLQLQFRNPNSKMSLHYETAL 133

Query: 126 AAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERA-RGEVEFG 184
            A+ Y    L  T L PF Q K ++T ++    +   YV   +   I KER+ +G VEF 
Sbjct: 134 CAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDSIGKERSVKGNVEFD 193

Query: 185 IGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCR 234
           + +  +V ++   +  R R++ VYC+ V +GV    G  G +VG  + C+
Sbjct: 194 LRMISYVTFRYGAFRRR-RYVTVYCDDVAVGVPVSSG-EGKMVGSSKRCK 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546690|ref|XP_003541756.1| PREDICTED: uncharacterized protein At1g08160-like [Glycine max]

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 114/217 (52%), Gaps = 17/217 (7%)

Query: 23  AAPPPQPQVAPTNRSPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFR 82
           A PP Q Q    N+ P R     S LL  + + ++ +I ++ +A    WL+LKP+  E+ 
Sbjct: 2   AHPPTQSQSRAANK-PKR-----SNLLRCIAIFILALIILVGIAVIIIWLVLKPKRLEYT 55

Query: 83  VDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPP 142
           V++A+I   N T AN  + A +  ++R  NPN ++++ Y+T+E +V Y +  L +  + P
Sbjct: 56  VENAAIHNFNLTDANH-LYANFDFTIRSYNPNSRVSIYYDTVEVSVRYEDQTLATNAVQP 114

Query: 143 FSQEKGNETRLHFQAGLLSEYVG--ESVARGIEKERARGEVEFGIGVYGWVRYKARWWSM 200
           F Q   N TRLH   GL ++ V   +SV + +  ER+ G++E  + +   +R+K   W  
Sbjct: 115 FFQSHKNVTRLH--VGLTAQTVALYDSVPKDLRLERSSGDIELDVWMRARIRFKVGVWKS 172

Query: 201 RWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRVEM 237
           + R + ++C+ V +  S           +  PC VE+
Sbjct: 173 KHRVLKIFCSPVLVHFSKGKS------FERAPCDVEL 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2039632	243	AT2G27260 "AT2G27260" [Arabido	0.772	0.753	0.292	5.1e-19
TAIR|locus:2164092	213	AT5G53730 "AT5G53730" [Arabido	0.658	0.732	0.317	1.5e-12
TAIR|locus:2172681	207	AT5G22870 "AT5G22870" [Arabido	0.704	0.806	0.238	1.3e-11
TAIR|locus:2079974	300	AT3G52460 "AT3G52460" [Arabido	0.691	0.546	0.270	7.4e-11
TAIR|locus:2195783	224	AT1G61760 "AT1G61760" [Arabido	0.691	0.732	0.239	2e-10
TAIR|locus:2115638	226	AT4G05220 "AT4G05220" [Arabido	0.704	0.738	0.232	2.8e-08
TAIR|locus:2039185	227	YLS9 "AT2G35980" [Arabidopsis	0.632	0.660	0.290	2.9e-08
TAIR|locus:2205180	221	AT1G08160 "AT1G08160" [Arabido	0.620	0.665	0.238	9.6e-08
TAIR|locus:2167489	248	NHL25 "AT5G36970" [Arabidopsis	0.763	0.729	0.225	2.5e-06
TAIR|locus:2095685	206	AT3G44220 "AT3G44220" [Arabido	0.586	0.674	0.289	4.8e-06

TAIR|locus:2039632 AT2G27260 "AT2G27260" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 55/188 (29%), Positives = 92/188 (48%)

Query:    48 LLCRLFLXXXXXXXXXXXXXFATWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQLS 107
             ++ RLF+             F  +LI++P+ P+  ++S S++              W L 
Sbjct:    58 IIRRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGK--WDLQ 115

Query:   108 LRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGES 167
             L+ RNPN K++L Y T   A+ Y    L  T L PF Q K ++T ++    +   YV   
Sbjct:   116 LQFRNPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGR 175

Query:   168 VARGIEKERA-RGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDL 226
             +   I KER+ +G VEF + +  +V ++   +  R R++ VYC+ V +GV    G  G +
Sbjct:   176 LVDSIGKERSVKGNVEFDLRMISYVTFRYGAFRRR-RYVTVYCDDVAVGVPVSSGE-GKM 233

Query:   227 VGQVRPCR 234
             VG  + C+
Sbjct:   234 VGSSKRCK 241

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2164092 AT5G53730 "AT5G53730" [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 52/164 (31%), Positives = 72/164 (43%)

Query:    51 RLFLXXXXXXXXXXXXXFATWLILKPEFPEFRVDSASIAQLXXXXXXXXXX-XXWQLSLR 109
             +LF              F  WLIL PE PEF +  A I  L              QL+L 
Sbjct:    26 KLFFTFSTFFSGLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLF 85

Query:   110 VRNPNRKLALVYNTLEAAVLY-GEWELDSTLLPPF--SQEKGNETRLHFQAGLLSEYVGE 166
              +NPN+K+ + Y+ L     Y G+       LPPF  S E+ N      Q   L   V +
Sbjct:    86 SKNPNKKVGIYYDKLLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELP--VAQ 143

Query:   167 SVARGIEKERARGEVEFGIGVYGWVRYK-ARWWSMRWRFMNVYC 209
             S    I +ER+ G++  G+ + G +R+K   W S  +RF NV C
Sbjct:   144 SFGYQISRERSTGKIIIGMKMDGKLRWKIGTWVSGAYRF-NVNC 186

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2172681 AT5G22870 "AT5G22870" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 41/172 (23%), Positives = 79/172 (45%)

Query:    48 LLCRLFLXXXXXXXXXXXXXFATWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQLS 107
             L+C +FL               TWL  KP+   + V++AS+ Q             +Q +
Sbjct:    25 LICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASV-QNFNLTNDNHMSATFQFT 83

Query:   108 LRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGES 167
             ++  NPN ++++ Y+++E  V + +  L    + PF Q + N  ++     L++E V  S
Sbjct:    84 IQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQI--DETLIAENVAVS 141

Query:   168 VARG--IEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVS 217
              + G  +  + + G++ F + V   VR+K   W    R   + C+ V + +S
Sbjct:   142 KSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLS 193

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2079974 AT3G52460 "AT3G52460" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 47/174 (27%), Positives = 77/174 (44%)

Query:    70 TWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQLSLRVRNPNRKLALVYNTLEAAVL 129
             TWL+L+P+ P F V++ S++              W  +L + N N KL   ++ ++  V 
Sbjct:   127 TWLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQ--WTANLTIENQNTKLKGYFDRIQGLVY 184

Query:   130 Y----GEWELDSTLL--PPFSQEKGNETRLH-FQAGLLSE-YVGESVARGIEKERARGEV 181
             +    GE E  +T    P F + K +        AG   +  V   V   ++KER  G V
Sbjct:   185 HQNAVGEDEFLATAFFQPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMKKERETGTV 244

Query:   182 EFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGTAGDLVGQVRPCRV 235
              F + +  WV +K   W+ R   + V+C  +K+G     G    L+ +  PC V
Sbjct:   245 TFSLRMAVWVTFKTDGWAARESGLKVFCGKLKVGFEGISGNGAVLLPKPLPCVV 298

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2195783 AT1G61760 "AT1G61760" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 41/171 (23%), Positives = 77/171 (45%)

Query:    46 SRLLCRLFLXXXXXXXXXXXXXFATWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQ 105
             S+L+C +FL             F  W+ L+P  P   +   SI+ L            ++
Sbjct:    41 SKLICAIFLSLLLCLGIIT---FILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFK 97

Query:   106 LSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLP-PFSQEKGNETRLHFQAGLLSEYV 164
             ++    NPN+ + + Y+++E +V Y E  + ST L  PF Q+  N + +       +  V
Sbjct:    98 IT--AHNPNQNVGIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAV 155

Query:   165 GESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIG 215
              +     +E++R +G++ F + V   +R+K   W  +   M   C  ++IG
Sbjct:   156 NKDRWMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCY-IEIG 205

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2115638 AT4G05220 "AT4G05220" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 2.8e-08, P = 2.8e-08
 Identities = 41/176 (23%), Positives = 73/176 (41%)

Query:    46 SRLLCRLFLXXXXXXXXXXXXXFATWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQ 105
             S+ +C +FL             F  WL L+P  P F +    +  L            + 
Sbjct:    43 SKFICAMFLLVLFFVGVIA---FILWLSLRPHRPRFHIQDFVVQGLDQPTGVENARIAFN 99

Query:   106 LSLRVRNPNRKLALVYNTLEAAVLYGEWELDST-LLPPFSQEKGNETRLHFQAGLLSEYV 164
             ++  + NPN+ + + ++++E ++ Y +  +    LL PF Q+  N T +       S  V
Sbjct:   100 VT--ILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTV 157

Query:   165 GESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDG 220
               +       +RA+G V F + +   +R+K   W  +   M+  CN   I V  DG
Sbjct:   158 NSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCN---IVVGRDG 210

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2039185 YLS9 "AT2G35980" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 45/155 (29%), Positives = 67/155 (43%)

Query:    71 WLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQLSLRVRNPNRKLALVYNTLEAAVLY 130
             WLI++P   +F V  AS+ +               L++ VRNPN+++ L Y+ +EA   Y
Sbjct:    60 WLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYY 119

Query:   131 GEWELDSTLLPPFSQEKGNETRLH--FQA-GLLSEYVGESVARGIEKERARGEVEFGIGV 187
                   +  L PF Q   N T L   FQ   L+    G+S  R +  ER  G     I  
Sbjct:   120 EGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS--RTLNAERISGVYNIEIKF 177

Query:   188 YGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDGGT 222
                VR+K      R     V C+ +++ +S   GT
Sbjct:   178 RLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGT 212

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0051707 "response to other organism" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2205180 AT1G08160 "AT1G08160" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 9.6e-08, P = 9.6e-08
 Identities = 36/151 (23%), Positives = 71/151 (47%)

Query:    70 TWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQLSLRVRNPNRKLALVYNTLEAAVL 129
             T+L L+P+   + V++AS+ +             +   ++  NP + +++ Y+++  +  
Sbjct:    58 TYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTA 117

Query:   130 YGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESV--ARGIEKERARGEVEFGIGV 187
             +    +    + PF Q   NETR+  Q  L+S  V  S   AR +  E+++G +E  + +
Sbjct:   118 HHNQSVAHKNISPFKQRPKNETRIETQ--LVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175

Query:   188 YGWVRYKARWWSMRWRFMNVYCNGVKIGVSN 218
                V YK   +  R R +   C  V I V++
Sbjct:   176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTS 206

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2167489 NHL25 "AT5G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 43/191 (22%), Positives = 80/191 (41%)

Query:    43 SFWSRLLCRLFLXXXXXXXXXXXXXFATWLILKPEFPEFRVDSASIAQLXXXXXXXXXXX 102
             S W R +C   L                +L+ +P+FP++ +D   + +            
Sbjct:    56 SCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTA 115

Query:   103 XWQLSLRVRNPNRKLALVYNT-LEAAVLYGEWELDSTLLPPFSQEKGNETRLHFQAGLLS 161
              + +++  +NPN K+ + Y    + +VLY +  + +  LP F Q   N T +  +    +
Sbjct:   116 -FNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFT 174

Query:   162 EYVGESVARGIEKERARGEVEFGIGVYGWVRYK-ARWWSMRWRFMNVYCNGVKIGVSNDG 220
             +     +    E++R  G +   I V   VR K  +   M+ RF+      V+ GVS D 
Sbjct:   175 QNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFL------VRCGVSVDS 228

Query:   221 GTAGDLVGQVR 231
               A  ++ +VR
Sbjct:   229 LAANSVI-RVR 238

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

TAIR|locus:2095685 AT3G44220 "AT3G44220" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 4.8e-06, P = 4.8e-06
 Identities = 42/145 (28%), Positives = 63/145 (43%)

Query:    68 FATWLILKPEFPEFRVDSASIAQLXXXXXXXXXXXXWQLSLRVRNPNRKLALVYNTLEAA 127
             F  W IL P  P F +  A+I                Q++L  RNPN K+ + Y+ L+  
Sbjct:    36 FLVWAILHPHGPRFVLQDATIYAFNVSQPNYLTSNL-QVTLSSRNPNDKIGIFYDRLDIY 94

Query:   128 VLYGEWELD-STLLPPFSQEKGNETRLH-FQAGLLSEYVGESVARGIEKERARGEVEFGI 185
               Y   ++  +TLLP   Q   + T    F  G     V    +  + ++   G V   I
Sbjct:    95 ASYRNQQVTLATLLPATYQGHLDVTIWSPFLYGTTVP-VAPYFSPALSQDLTAGMVLLNI 153

Query:   186 GVYGWVRYKARWW-SMRWRFMNVYC 209
              + GWVR+K   W S R+R ++V C
Sbjct:   154 KIDGWVRWKVGTWVSGRYR-LHVNC 177

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_I001567 hypothetical protein (248 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	237
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	3e-05

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 108 LRVRNPNRKLALVYNTLEAAVLYGEWELDS-TLLPPFSQEKGNETRLHFQAGLLSEYVGE 166
           LRVRNPN    L Y+ L   + Y   EL S T   P +   G  T L     +  + +  
Sbjct: 2   LRVRNPN-SFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDLAR 60

Query: 167 SVARGIEKE-----RARGEVEFGIGVYGWVRY 193
            +   +          RG ++ G  V G    
Sbjct: 61  LLKDLLAVGLELPYTLRGRLKVGGPVKGSRTV 92

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.47
smart00769	100	WHy Water Stress and Hypersensitive response.	98.51
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.42
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	98.08
COG5608	161	LEA14-like dessication related protein [Defense me	97.42
PLN03160	219	uncharacterized protein; Provisional	96.36
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	87.59
KOG3950	292	consensus Gamma/delta sarcoglycan [Cytoskeleton]	86.04

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=9.5e-35  Score=244.77  Aligned_cols=167  Identities=11%  Similarity=0.237  Sum_probs=144.4

Q ss_pred             HHHHHHHHHhheeeEEecCCCEEEEeeeeeeeeccCCC---CceeEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEe
Q 026507           59 IISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSA---NSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWEL  135 (237)
Q Consensus        59 lill~gv~~li~~lvlrP~~P~f~V~~~~v~~~~~~~~---~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~l  135 (237)
                      +++++++++.++|++||||+|+|+|+++++++|+++..   +..+|++++++++++|||+ ++|+|+++++.++|+|+.+
T Consensus        47 ~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~~~~~v~Y~g~~v  125 (219)
T PLN03160         47 LLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFKYSNTTTTIYYGGTVV  125 (219)
T ss_pred             HHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEEEcCeEEEEEECCEEE
Confidence            34445667778899999999999999999999998642   3468899999999999999 8999999999999999999


Q ss_pred             eceecCCeeecCCCeEEEEEEEEeeeeccChHHHHHHHHHHhCCeEEEEEEEEEEEEEEEEEEEEeeeEEEEEcCeEEEe
Q 026507          136 DSTLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGIGVYGWVRYKARWWSMRWRFMNVYCNGVKIG  215 (237)
Q Consensus       136 g~~~vp~f~q~~~~~~~v~~~l~~~~~~l~~~~~~~l~~d~~~G~v~l~v~v~~~vr~~vg~~~~~~~~~~v~C~~l~v~  215 (237)
                      |.+.+|+|+|++++++.+.+++......+..  ..+|.+|.++|.++|+++++.++++++|++.++++.++++|+ +.|+
T Consensus       126 G~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~-v~V~  202 (219)
T PLN03160        126 GEARTPPGKAKARRTMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCT-MTVN  202 (219)
T ss_pred             EEEEcCCcccCCCCeEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeE-EEEE
Confidence            9999999999999999999998766544433  257999999999999999999999999999999999999998 9998


Q ss_pred             ecCCCCCCccccccCCCceee
Q 026507          216 VSNDGGTAGDLVGQVRPCRVE  236 (237)
Q Consensus       216 ~~~~g~~~g~~~~~~~~C~v~  236 (237)
                      +++.       .+++++|+.+
T Consensus       203 ~~~~-------~i~~~~C~~~  216 (219)
T PLN03160        203 ITSQ-------AIQGQKCKRH  216 (219)
T ss_pred             CCCC-------EEeccEeccc
Confidence            7431       4578899875

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.47  E-value=3.9e-13  Score=99.13  Aligned_cols=98  Identities=22%  Similarity=0.301  Sum_probs=73.6

Q ss_pred             EEEEecCCCeeeEEEeceEEEEEECCEEee-ceecCCeeecCCCeEEEEEEEEeeeeccChHHHHHHHHHHhCCeEEEEE
Q 026507          107 SLRVRNPNRKLALVYNTLEAAVLYGEWELD-STLLPPFSQEKGNETRLHFQAGLLSEYVGESVARGIEKERARGEVEFGI  185 (237)
Q Consensus       107 ~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg-~~~vp~f~q~~~~~~~v~~~l~~~~~~l~~~~~~~l~~d~~~G~v~l~v  185 (237)
                      +|+++|||. ++++|++++++++|+|..+| ....++|.|++++++.+.+.+..+...+    .+.+.++. +|...+++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceEE
Confidence            689999999 99999999999999999999 7788999999999999999888875443    45566656 66777888


Q ss_pred             EEEEEEEEEE-EEEEEeeeEEEEEcC
Q 026507          186 GVYGWVRYKA-RWWSMRWRFMNVYCN  210 (237)
Q Consensus       186 ~v~~~vr~~v-g~~~~~~~~~~v~C~  210 (237)
                      .+++++++++ +.+...++.+.++|+
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeE
Confidence            8888888884 433223344555553

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.51  E-value=1.7e-06  Score=64.13  Aligned_cols=61  Identities=21%  Similarity=0.244  Sum_probs=56.9

Q ss_pred             eeEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEeeceecC-CeeecCCCeEEEEEEEEee
Q 026507           99 TMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLP-PFSQEKGNETRLHFQAGLL  160 (237)
Q Consensus        99 ~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~~l~~~  160 (237)
                      .++.++.++++++|||. +.+.|+.++.+++|+|..+|.+..+ ++..++++++.+.+.+...
T Consensus        12 ~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~   73 (100)
T smart00769       12 GLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN   73 (100)
T ss_pred             ceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee
Confidence            57899999999999999 8999999999999999999999985 7999999999999998874

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.42  E-value=2e-05  Score=66.79  Aligned_cols=117  Identities=15%  Similarity=0.152  Sum_probs=78.4

Q ss_pred             CCcccCCccceehhhHHHHHHHHHHHHHHHHhheeeEEecCCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCe
Q 026507           37 SPFRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRK  116 (237)
Q Consensus        37 ~~~~~~p~~~r~~~~~~~~l~~lill~gv~~li~~lvlrP~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~  116 (237)
                      .+.|.+|++.++.-+  +++++.+++.|+++    +.|-||.-.++-.++......++..+..+..++.-.|.++|+|. 
T Consensus        65 ~DqRLKPrRTklyV~--~sV~~CLl~~~L~i----FFLfPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-  137 (238)
T PF07092_consen   65 SDQRLKPRRTKLYVF--LSVLLCLLLSGLVI----FFLFPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-  137 (238)
T ss_pred             cccccCCceeEEEee--HHHHHHHHHHHheE----EEEeCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-
Confidence            567888887655433  22222233333222    23447765555444444444444444578999999999999998 


Q ss_pred             eeEEEeceEEEEEECCEEeeceecCC-eeecCCCeEEEEEEEEee
Q 026507          117 LALVYNTLEAAVLYGEWELDSTLLPP-FSQEKGNETRLHFQAGLL  160 (237)
Q Consensus       117 ~~i~Y~~~~~~v~Y~g~~lg~~~vp~-f~q~~~~~~~v~~~l~~~  160 (237)
                      ..+.-.++.+++.|....+|.+.... ...++++.+.+.+.+...
T Consensus       138 y~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t~  182 (238)
T PF07092_consen  138 YPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKTT  182 (238)
T ss_pred             EEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeEE
Confidence            89999999999999999999987654 456777777777766553

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=98.08  E-value=2.1e-05  Score=70.57  Aligned_cols=90  Identities=18%  Similarity=0.345  Sum_probs=58.3

Q ss_pred             cccCCccceehhhHHHHHHHHHHHHHHHHhheeeEEecCCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCeee
Q 026507           39 FRLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLA  118 (237)
Q Consensus        39 ~~~~p~~~r~~~~~~~~l~~lill~gv~~li~~lvlrP~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~~~  118 (237)
                      ||+...|+|+.+|+++.+++|+++.+++.+++ ..-||   --.|+-..|.+.=.+    .-..-|++++.+.|||. +.
T Consensus       293 ~r~r~~~~r~~~c~~~~i~~lL~ig~~~gFv~-AttKp---L~~v~v~~I~NVlaS----~qELmfdl~V~A~NPn~-~~  363 (387)
T PF12751_consen  293 YRQRSWFSRFASCIYLSILLLLVIGFAIGFVF-ATTKP---LTDVQVVSIQNVLAS----EQELMFDLTVEAFNPNW-FT  363 (387)
T ss_pred             hccccHHhhhhHHHHHHHHHHHHHHHHHHhhh-hcCcc---cccceEEEeeeeeec----cceEEEeeEEEEECCCe-EE
Confidence            44445667888888877666555555444443 33454   222222233332222    44678999999999998 99


Q ss_pred             EEEeceEEEEEECCEEeec
Q 026507          119 LVYNTLEAAVLYGEWELDS  137 (237)
Q Consensus       119 i~Y~~~~~~v~Y~g~~lg~  137 (237)
                      |..++.+++||-+...+|.
T Consensus       364 V~I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  364 VTIDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             EEeccceeeeEecCCccCc
Confidence            9999999999977666654

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.42  E-value=0.021  Score=45.14  Aligned_cols=82  Identities=12%  Similarity=0.140  Sum_probs=65.2

Q ss_pred             CCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEeeceec-CCeeecCCCeEEEEE
Q 026507           77 EFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLL-PPFSQEKGNETRLHF  155 (237)
Q Consensus        77 ~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~v-p~f~q~~~~~~~v~~  155 (237)
                      ++|.+.--.+..-...      .....+-.++.++|||. +.+-...++.+++-.|..+|.+.. .++..++++...+.+
T Consensus        31 ~~p~ve~~ka~wGkvt------~s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv  103 (161)
T COG5608          31 KKPGVESMKAKWGKVT------NSETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDV  103 (161)
T ss_pred             CCCCceEEEEEEEEEe------ccceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEE
Confidence            4566666555554433      23467889999999999 899999999999999999999864 679999999999999


Q ss_pred             EEEeeeeccC
Q 026507          156 QAGLLSEYVG  165 (237)
Q Consensus       156 ~l~~~~~~l~  165 (237)
                      .+..+...+.
T Consensus       104 ~l~~d~~~~k  113 (161)
T COG5608         104 PLRLDNSKIK  113 (161)
T ss_pred             EEEEehHHHH
Confidence            9988754443

>PLN03160 uncharacterized protein; Provisional

Probab=96.36  E-value=0.015  Score=49.26  Aligned_cols=106  Identities=13%  Similarity=0.107  Sum_probs=62.0

Q ss_pred             ccCCccceehhhHHHHHHHHHHHHHHHHhheeeEEecC--CCEEEEeeeeeee-------eccCCC-C-ceeEEEEEEEE
Q 026507           40 RLASFWSRLLCRLFLVVIVIISIMAVASFATWLILKPE--FPEFRVDSASIAQ-------LNTTSA-N-STMTATWQLSL  108 (237)
Q Consensus        40 ~~~p~~~r~~~~~~~~l~~lill~gv~~li~~lvlrP~--~P~f~V~~~~v~~-------~~~~~~-~-~~l~~~~~~~l  108 (237)
                      +++.++++||+|++++++++++++++++++++=-=+|+  --.++++++.+..       +|++-. + ..-|.|. +.+
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~  109 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASF  109 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeE
Confidence            34556677888888888888888888888777666663  4556666665532       222110 0 0113444 344


Q ss_pred             EEecCCCeeeEEEeceEEEEEECCEEeeceecCCeeecCCCeEE
Q 026507          109 RVRNPNRKLALVYNTLEAAVLYGEWELDSTLLPPFSQEKGNETR  152 (237)
Q Consensus       109 ~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~vp~f~q~~~~~~~  152 (237)
                      .-+  +..+.++|+...+    +...+..+.+++..+..-+.+.
T Consensus       110 ~Y~--~~~~~v~Y~g~~v----G~a~~p~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        110 KYS--NTTTTIYYGGTVV----GEARTPPGKAKARRTMRMNVTV  147 (219)
T ss_pred             EEc--CeEEEEEECCEEE----EEEEcCCcccCCCCeEEEEEEE
Confidence            443  3447899988544    2334555566666555555553

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=87.59  E-value=11  Score=28.89  Aligned_cols=51  Identities=12%  Similarity=0.200  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHhheeeEE--ecCCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCe
Q 026507           58 VIISIMAVASFATWLIL--KPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRK  116 (237)
Q Consensus        58 ~lill~gv~~li~~lvl--rP~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~  116 (237)
                      .++++++++.+++|..+  +.+.|.+++......+        .....+-+-++++|-..+
T Consensus        11 s~~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r--------~~~gqyyVpF~V~N~gg~   63 (122)
T TIGR02588        11 STLILAAMFGLVAYDWLRYSNKAAVLEVAPAEVER--------MQTGQYYVPFAIHNLGGT   63 (122)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCeEEEeehheeE--------EeCCEEEEEEEEEeCCCc
Confidence            33444555666666544  6789999888776643        233457777888887664

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

>KOG3950 consensus Gamma/delta sarcoglycan [Cytoskeleton]

Probab=86.04  E-value=2  Score=36.75  Aligned_cols=76  Identities=14%  Similarity=0.350  Sum_probs=41.6

Q ss_pred             ccceehhhHHHHHHHHHHHHHHHHhheee----EEecC---CCEEEEeeeeeeeecc----------C--C-CCceeEEE
Q 026507           44 FWSRLLCRLFLVVIVIISIMAVASFATWL----ILKPE---FPEFRVDSASIAQLNT----------T--S-ANSTMTAT  103 (237)
Q Consensus        44 ~~~r~~~~~~~~l~~lill~gv~~li~~l----vlrP~---~P~f~V~~~~v~~~~~----------~--~-~~~~l~~~  103 (237)
                      +|+|.|-++|..++.+++++-++ +.+|+    -|.|.   .-+++=+.+++++-..          .  . ....+...
T Consensus        31 GWRKrcLY~fvLlL~i~ivvNLa-lTiWIlkVm~Fs~dGmG~Lkit~~GirleG~sefl~pl~akei~Sr~~~~l~~~S~  109 (292)
T KOG3950|consen   31 GWRKRCLYTFVLLLMILIVVNLA-LTIWILKVMNFSPDGMGNLKITKKGIRLEGDSEFLQPLYAKEIHSRPGSPLYLQSA  109 (292)
T ss_pred             ehHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCcccccceEEccCcEEEechhhhhhhhhhhhhhcCCCCceEEEec
Confidence            68877777666555555544433 33353    23342   3344444444443210          0  0 11346677


Q ss_pred             EEEEEEEecCCCeeeEE
Q 026507          104 WQLSLRVRNPNRKLALV  120 (237)
Q Consensus       104 ~~~~l~~~NPN~~~~i~  120 (237)
                      =++++.++|||.++.=+
T Consensus       110 rnvtvnarn~~g~v~~~  126 (292)
T KOG3950|consen  110 RNVTVNARNPNGKVTGQ  126 (292)
T ss_pred             cCeeEEccCCCCceeee
Confidence            78999999999976543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.3
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.23
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.08

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.30  E-value=1.6e-05  Score=63.68  Aligned_cols=77  Identities=17%  Similarity=0.218  Sum_probs=69.7

Q ss_pred             CCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEeeceecC-CeeecCCCeEEEEE
Q 026507           77 EFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLP-PFSQEKGNETRLHF  155 (237)
Q Consensus        77 ~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~  155 (237)
                      +.|++++.++++.+++..      ..+|.+.|+++|||. +.+.+..++.++.-.|..++++..+ ++..++++++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~------~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD------GVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS------SEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc------eEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            679999999999887653      488999999999999 8999999999999999999999887 58999999999999


Q ss_pred             EEEee
Q 026507          156 QAGLL  160 (237)
Q Consensus       156 ~l~~~  160 (237)
                      .+...
T Consensus       116 pv~v~  120 (174)
T 1yyc_A          116 PVKVA  120 (174)
T ss_dssp             EEEES
T ss_pred             EEEEE
Confidence            98875

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.23  E-value=2.7e-06  Score=66.76  Aligned_cols=77  Identities=17%  Similarity=0.189  Sum_probs=68.0

Q ss_pred             CCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEeeceecC-CeeecCCCeEEEEE
Q 026507           77 EFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLP-PFSQEKGNETRLHF  155 (237)
Q Consensus        77 ~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v~~  155 (237)
                      +.|++++.++++.+++.      ...+|.+.|+++|||. +.+.+..++.++.-.|..++++..+ ++..++++++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~------~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR------DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTT------TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCc------ceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence            67999999999877654      3578999999999999 8999999999999999999999886 58899999999999


Q ss_pred             EEEee
Q 026507          156 QAGLL  160 (237)
Q Consensus       156 ~l~~~  160 (237)
                      .+...
T Consensus        93 pv~v~   97 (151)
T 1xo8_A           93 PVVVP   97 (151)
T ss_dssp             CCCEE
T ss_pred             EEEEE
Confidence            88776

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.08  E-value=0.00011  Score=56.51  Aligned_cols=73  Identities=15%  Similarity=0.175  Sum_probs=63.0

Q ss_pred             eEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEeecee-cCCeeecCCCeEEEEEEEEeeeeccChHHHHHHH
Q 026507          100 MTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTL-LPPFSQEKGNETRLHFQAGLLSEYVGESVARGIE  173 (237)
Q Consensus       100 l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~-vp~f~q~~~~~~~v~~~l~~~~~~l~~~~~~~l~  173 (237)
                      -...|.+.|+++|||. +.+.++.++.++...|..+|++. ...+..++.+.+.+.+.+..+...+.+...+.+.
T Consensus        16 ~~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~   89 (136)
T 3but_A           16 SQTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIA   89 (136)
T ss_dssp             SEEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHH
T ss_pred             cEEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhh
Confidence            3578999999999998 89999999999999999999987 5689999999999999999987666665555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.34

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.34  E-value=5.1e-07  Score=69.03  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=69.4

Q ss_pred             ecCCCEEEEeeeeeeeeccCCCCceeEEEEEEEEEEecCCCeeeEEEeceEEEEEECCEEeeceecC-CeeecCCCeEEE
Q 026507           75 KPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLLP-PFSQEKGNETRL  153 (237)
Q Consensus        75 rP~~P~f~V~~~~v~~~~~~~~~~~l~~~~~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~~~~v  153 (237)
                      +=+.|++++.++++.+++.      ...++.++|+++|||. +++..+.++.+++.+|..++++..+ ++..++++++.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~------~~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNR------DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTT------TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCCeEEEEEEEeeeccc------ceEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEE
Confidence            4567999999999988764      3578999999999999 8999999999999999999998876 588999999999


Q ss_pred             EEEEEee
Q 026507          154 HFQAGLL  160 (237)
Q Consensus       154 ~~~l~~~  160 (237)
                      .+.++..
T Consensus        91 ~vpv~v~   97 (151)
T d1xo8a_          91 DIPVVVP   97 (151)
T ss_dssp             EECCCEE
T ss_pred             EEEEEEE
Confidence            9988765