Citrus Sinensis ID: 026536

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccHHHccccccccccccccEEEEEEEEcccEEEEEEEcccccccEEEEEccccHHHHHHHHHcccEEEEEEEccccccccccEEEEEEEEEccEEEEEEEccccccHHHHHHHHHHHcccccccEEcccccccccccccccEEEEEccccEEEccccccEEEEccccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHcccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEcccccccEEEEEccccHHHHHHHHHcccEEEEEEEcccccccccccccEEEEEEcccEEEEEEEcccccHHHHHHHHHHcHEEccccEccccccccccccccccEEEEEEEEEEEEccccccEEEEEccccccccEEEEEEEEcc
Coil and Loop (DISEMBL)
mppihsspyyqmdnpAILSLLRhtttgtgepkrskssstgglLKIFKLFPMLTSGCKMVallgrprkpllkdsattgtifgfRKGRVClaiqedphclpmfviELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRrkhlsddeLHVVQLLRGvsmgagvlpspnekeasactdgELTYMRARFErvagskdseafyminpegaagpelsIFFVRNH
Flexible Loop (DISEMBL)
mppihsspyyqMDNPAILSLLRHTTtgtgepkrskssstgglLKIFKLFPMLTSGCKMVALLgrprkpllkdsattgtifgfRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALEsetkthkkkllEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSmgagvlpspnekEASACTDGELTYMRARFERVAGSKDSEAFYMINpegaagpelsIFFVRNH
Low Complexity Region (SEG)
MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIAlesetkthkkklleeFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH
Disordered region (IsUnstruct)
****************************************GLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGV***************ELTYMRARFERVA*****EAFYMINPEGAAGPELSIFFV***
Disordered Region (DISOPRED)
*******************************************KIFKLFPMLTSGCKM******************GTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIAL***********L**FVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPS*************LTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH
Disordered Region (DISEMBL)
MPPIHSSPYYQMDNPAILSLLRHTT**************GGLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH
Disordered Region (DISPRO)
*******PYYQMDNPAILSLLRH**************STGGLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEK****CTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRN*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
255538414	229	conserved hypothetical protein [Ricinus	0.966	1.0	0.835	1e-112
224063549	230	predicted protein [Populus trichocarpa]	0.962	0.991	0.812	1e-104
225458517	228	PREDICTED: uncharacterized protein LOC10	0.962	1.0	0.767	1e-101
388508538	236	unknown [Lotus japonicus]	0.987	0.991	0.786	1e-101
357465433	237	hypothetical protein MTR_3g101300 [Medic	0.978	0.978	0.743	1e-97
359806340	232	uncharacterized protein LOC100782262 [Gl	0.970	0.991	0.765	2e-97
224137366	202	predicted protein [Populus trichocarpa]	0.848	0.995	0.857	6e-96
449446969	240	PREDICTED: uncharacterized protein LOC10	0.970	0.958	0.740	1e-95
356519156	231	PREDICTED: uncharacterized protein LOC10	0.970	0.995	0.722	3e-92
297795223	238	hypothetical protein ARALYDRAFT_494768 [	0.983	0.978	0.694	3e-91

>gi|255538414|ref|XP_002510272.1| conserved hypothetical protein [Ricinus communis] gi|223550973|gb|EEF52459.1| conserved hypothetical protein [Ricinus communis]

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/237 (83%), Positives = 216/237 (91%), Gaps = 8/237 (3%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVA 60
           MPP+HSSPY+QMDNPAI+SLLR T       KRSKSSS GGLLK+FKLFPMLTSGCKMVA
Sbjct: 1   MPPVHSSPYFQMDNPAIMSLLRQTAA----EKRSKSSS-GGLLKMFKLFPMLTSGCKMVA 55

Query: 61  LLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDI 120
           LLGRPRKP+LKDSATTGT+FG+RKGRV LAIQEDPHC+PMFVIELP+ T+A  KEMASDI
Sbjct: 56  LLGRPRKPMLKDSATTGTLFGYRKGRVSLAIQEDPHCVPMFVIELPIHTSAFHKEMASDI 115

Query: 121 VRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGV 180
           VRIALESETKTHKKK++EEFVWAVYCNGRKIGYSIRRK +SDDELHV+QLLRGVSMGAGV
Sbjct: 116 VRIALESETKTHKKKVMEEFVWAVYCNGRKIGYSIRRKQMSDDELHVMQLLRGVSMGAGV 175

Query: 181 LPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH 237
           LPSPNEKE +   DGELTY+RARF+RV GSKDSEA YMINP+GAAGPELSIFFVR H
Sbjct: 176 LPSPNEKETA---DGELTYIRARFDRVVGSKDSEALYMINPDGAAGPELSIFFVRAH 229

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063549|ref|XP_002301199.1| predicted protein [Populus trichocarpa] gi|222842925|gb|EEE80472.1| predicted protein [Populus trichocarpa]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/235 (81%), Positives = 207/235 (88%), Gaps = 7/235 (2%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVA 60
           MPP+HSSPY+QMDN AILSL RHT    GE  +   SS+ GLLK+FKLFPMLTSGCKMVA
Sbjct: 1   MPPVHSSPYFQMDNQAILSLHRHTA---GE--KRSKSSSSGLLKMFKLFPMLTSGCKMVA 55

Query: 61  LLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDI 120
           LLGRPRK LLKD+ATTGTIFG+RKGRV LAIQEDPHC+P FVIELPM ++   KEMASDI
Sbjct: 56  LLGRPRKALLKDNATTGTIFGYRKGRVSLAIQEDPHCVPRFVIELPMHSSLFHKEMASDI 115

Query: 121 VRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGV 180
           VRIALESETKTHKKKLLEEFVWAVYCNGRK+GYSIRRK +SDDELHV+QLLRGVSMGAGV
Sbjct: 116 VRIALESETKTHKKKLLEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQLLRGVSMGAGV 175

Query: 181 LPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
           LP PN  + SA  DGELTY+RARFERV GSKDSEA YMINP+GAAGPELSIFFVR
Sbjct: 176 LPCPNNVKESA--DGELTYIRARFERVVGSKDSEALYMINPDGAAGPELSIFFVR 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458517|ref|XP_002284248.1| PREDICTED: uncharacterized protein LOC100245545 [Vitis vinifera]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 182/237 (76%), Positives = 207/237 (87%), Gaps = 9/237 (3%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVA 60
           MP +HS P YQM+NPA+LSLLR T+      KRSKSS  GG  ++FKLFP+LTSGCKMVA
Sbjct: 1   MPSVHSGPCYQMENPALLSLLRPTSN----EKRSKSS--GGFFRMFKLFPLLTSGCKMVA 54

Query: 61  LLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDI 120
           LLGRPR+P + DSATTGTIFG+RKGRV LAIQ+DPHC+PMF+IELPMLT+ L KEMASDI
Sbjct: 55  LLGRPRRPQIGDSATTGTIFGYRKGRVSLAIQDDPHCVPMFIIELPMLTSLLHKEMASDI 114

Query: 121 VRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGV 180
           +RIALESETKTHKKKL+EEFVWAVYCNGRKIGYSIRRK +SD+ELHV+QLLRGVSMGAGV
Sbjct: 115 IRIALESETKTHKKKLMEEFVWAVYCNGRKIGYSIRRKQMSDEELHVMQLLRGVSMGAGV 174

Query: 181 LPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH 237
           LP  ++K+ +   DGELTYMRARFERV GSKDSEA +MINP+GA GPELSIFFVR H
Sbjct: 175 LPCQSDKDTA---DGELTYMRARFERVVGSKDSEALHMINPDGAGGPELSIFFVRVH 228

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508538|gb|AFK42335.1| unknown [Lotus japonicus]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/239 (78%), Positives = 207/239 (86%), Gaps = 5/239 (2%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSS--STGGLLKIFKLFPMLTSGCKM 58
           MP +HSSP Y M+NPAI SLLRHTTT        K S  STGGLLK+FKLFPMLTSGCKM
Sbjct: 1   MPSVHSSPCYPMENPAIASLLRHTTTAAATTTGGKRSKFSTGGLLKMFKLFPMLTSGCKM 60

Query: 59  VALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMAS 118
           VALLGRPRKP+LKDSATTGTIFGFRKGRV LAIQED   +P+F+IELPMLT+AL KEMAS
Sbjct: 61  VALLGRPRKPMLKDSATTGTIFGFRKGRVSLAIQEDTRQMPIFLIELPMLTSALNKEMAS 120

Query: 119 DIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGA 178
           DIVRIALESETK++KKK++EEFVWAVYCNGRK+GYSIRRK +SDDELHV+Q LRGVSMGA
Sbjct: 121 DIVRIALESETKSNKKKVMEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGA 180

Query: 179 GVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRNH 237
           GVLPS N++  S   DGE+TYMRARFERV GSKDSEA YMINP+GA GPELSIFFVR H
Sbjct: 181 GVLPSDNKESNS---DGEMTYMRARFERVIGSKDSEALYMINPDGAQGPELSIFFVRAH 236

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465433|ref|XP_003603001.1| hypothetical protein MTR_3g101300 [Medicago truncatula] gi|355492049|gb|AES73252.1| hypothetical protein MTR_3g101300 [Medicago truncatula]

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 180/242 (74%), Positives = 207/242 (85%), Gaps = 10/242 (4%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVA 60
           MP +HSSP Y M+NPAI SLLRHTT   G+ KR+K S+ GGLLK+FKLFPMLTSGCKMVA
Sbjct: 1   MPSVHSSPCYPMENPAIASLLRHTT---GDQKRNKFSA-GGLLKMFKLFPMLTSGCKMVA 56

Query: 61  LLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDI 120
           LLGRPRKP+LKDSATTGTIFG+RKGRV +AIQED   +P+F+IELPMLT+AL KEM+SDI
Sbjct: 57  LLGRPRKPMLKDSATTGTIFGYRKGRVSIAIQEDTRQMPIFLIELPMLTSALNKEMSSDI 116

Query: 121 VRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGV 180
           VRIALESETKT+KKKLLEEFVWAVYCNGRK+GYSIRRK + D+EL V+Q LRGVSMGAGV
Sbjct: 117 VRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDEELQVMQHLRGVSMGAGV 176

Query: 181 LPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPE-----GAAGPELSIFFVR 235
           LP+ ++ + S+  D ++TYMR RFERV GSKDSEAFYMINP+     GA GPE SIFFVR
Sbjct: 177 LPTASDHKESSDGD-QMTYMRGRFERVIGSKDSEAFYMINPDNNINNGAQGPEFSIFFVR 235

Query: 236 NH 237
            H
Sbjct: 236 AH 237

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806340|ref|NP_001241228.1| uncharacterized protein LOC100782262 [Glycine max] gi|255636523|gb|ACU18600.1| unknown [Glycine max]

 Score =  361 bits (926), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 183/239 (76%), Positives = 206/239 (86%), Gaps = 9/239 (3%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRS-KSSSTGGLLKIFKLFPMLTSGCKMV 59
           MP +HSSP Y M+NPA+ SLLRHTT   GE KRS K SS GGLLK+ KLFPML+SGCKMV
Sbjct: 1   MPSVHSSPGYSMENPALASLLRHTT---GENKRSNKLSSGGGLLKMLKLFPMLSSGCKMV 57

Query: 60  ALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASD 119
           ALLGRPRK +LKDSATTGTIFG+RKGRV LAIQED   +P+F+IELPML +AL KEMASD
Sbjct: 58  ALLGRPRK-MLKDSATTGTIFGYRKGRVSLAIQEDTRQMPVFLIELPMLASALNKEMASD 116

Query: 120 IVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAG 179
           IVRIALESETK++KKKLLEE+VWAVYCNGRK+GYSIRRK +SDDELHV+Q LRGVSMGAG
Sbjct: 117 IVRIALESETKSNKKKLLEEYVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAG 176

Query: 180 VLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAA-GPELSIFFVRNH 237
           VLP+ ++ +     DGE+TYMRARFERV GSKDSEAFYMINP+  A GPELSIFFVR H
Sbjct: 177 VLPTSSDHKD---CDGEMTYMRARFERVVGSKDSEAFYMINPDSTAQGPELSIFFVRPH 232

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137366|ref|XP_002327108.1| predicted protein [Populus trichocarpa] gi|222835423|gb|EEE73858.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (912), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 175/204 (85%), Positives = 186/204 (91%), Gaps = 3/204 (1%)

Query: 32  KRSKSSSTGGLLKIFKLFPMLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAI 91
           KRSKSSS GGLLK+FKLFPMLTSGCKMVALLGRPRKPLLKD ATTGTIFG+RKGRV LAI
Sbjct: 2   KRSKSSS-GGLLKMFKLFPMLTSGCKMVALLGRPRKPLLKDHATTGTIFGYRKGRVSLAI 60

Query: 92  QEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKI 151
           QEDPHC PMFVIELPM ++   KEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRK+
Sbjct: 61  QEDPHCAPMFVIELPMHSSLFHKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKV 120

Query: 152 GYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSK 211
           GY IRRK +SDDELHV+QLLRGVSMGAGVLP PN ++ SA  DGELTY+RARFERV GSK
Sbjct: 121 GYCIRRKQMSDDELHVMQLLRGVSMGAGVLPCPNNEKESA--DGELTYIRARFERVVGSK 178

Query: 212 DSEAFYMINPEGAAGPELSIFFVR 235
           DSEA YMINP+GAAGPELSIFF R
Sbjct: 179 DSEALYMINPDGAAGPELSIFFAR 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446969|ref|XP_004141242.1| PREDICTED: uncharacterized protein LOC101210761 [Cucumis sativus] gi|449498685|ref|XP_004160605.1| PREDICTED: uncharacterized protein LOC101226073 [Cucumis sativus]

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 183/247 (74%), Positives = 204/247 (82%), Gaps = 17/247 (6%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGG----------LLKIFKLFP 50
           MP +HSSP+  MDN A L LLRH T     PK S +S+T            LLK+FKLFP
Sbjct: 1   MPSLHSSPF--MDNSAFLPLLRHITR---RPKSSSTSTTTNGGSGGGSGGGLLKMFKLFP 55

Query: 51  MLTSGCKMVALLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTT 110
           MLTSGCKMVALLGRPRKPLLKD+ATTGTIFG+RKGRV LAIQEDPHCLP+FVIELPM T 
Sbjct: 56  MLTSGCKMVALLGRPRKPLLKDNATTGTIFGYRKGRVSLAIQEDPHCLPIFVIELPMQTA 115

Query: 111 ALQKEMASDIVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQL 170
           AL KEMASDI+RIALESETK+HKKK++EEF+WAVYCNGRKIGYS RRK +SDDELHV+Q 
Sbjct: 116 ALNKEMASDILRIALESETKSHKKKVMEEFLWAVYCNGRKIGYSFRRKQMSDDELHVMQH 175

Query: 171 LRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELS 230
           LRGVSMGAGVLPSP  ++ +   +GELTYMRARFERV GSKDSEA YMINP+GA GPELS
Sbjct: 176 LRGVSMGAGVLPSPASEKDN--LEGELTYMRARFERVVGSKDSEALYMINPDGAPGPELS 233

Query: 231 IFFVRNH 237
           IFFVR+ 
Sbjct: 234 IFFVRSQ 240

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519156|ref|XP_003528240.1| PREDICTED: uncharacterized protein LOC100816325 [Glycine max]

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 172/238 (72%), Positives = 200/238 (84%), Gaps = 8/238 (3%)

Query: 1   MPPIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSSTGGLLKIFKLFPMLTSGCKMVA 60
           MP +HSSP Y M+NPA+ SLL  T    GE KRSK SS GGLLK+ KLFPML+SGCKMVA
Sbjct: 1   MPSVHSSPCYSMENPALASLLGQTR---GENKRSKLSSGGGLLKMLKLFPMLSSGCKMVA 57

Query: 61  LLGRPRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDI 120
           LLGRPRK +LKDSATTGTIFG+RKGRV LAIQED   +P+F+IELPM+ +AL KEMASDI
Sbjct: 58  LLGRPRK-MLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMMASALNKEMASDI 116

Query: 121 VRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGV 180
           VRIALESETK++KKKLLEEFVWAVYCNGRK+GYSIRRK +SDDELHV+Q LRGVSMGAGV
Sbjct: 117 VRIALESETKSNKKKLLEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGV 176

Query: 181 LPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAA-GPELSIFFVRNH 237
           LP+ ++ +     DGE+TY+RA F+RV GS DS+A Y+INP+  A GPELSIFF+R H
Sbjct: 177 LPTSSDHKD---CDGEMTYIRASFQRVVGSMDSQALYIINPDATAHGPELSIFFLRPH 231

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297795223|ref|XP_002865496.1| hypothetical protein ARALYDRAFT_494768 [Arabidopsis lyrata subsp. lyrata] gi|297311331|gb|EFH41755.1| hypothetical protein ARALYDRAFT_494768 [Arabidopsis lyrata subsp. lyrata]

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/239 (69%), Positives = 200/239 (83%), Gaps = 6/239 (2%)

Query: 3   PIHSSPYYQMDNPAILSLLRHTTTGTGE--PKRSKSSSTGGLLKIFKLFPMLTSGCKMVA 60
           PI SSP++ MD+ A+LSLLRHT +       K++  S  GG+LK+FKL PML+SGCKMV 
Sbjct: 2   PIRSSPFFNMDSSAVLSLLRHTGSSMDSKPSKKTSGSIGGGVLKMFKLIPMLSSGCKMVN 61

Query: 61  LLGRP-RKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASD 119
           LL R  R+PLLKD ATTGTIFGFRKGRV LAIQEDPHCLPMF+IELPMLT+ALQKEMAS+
Sbjct: 62  LLSRGHRRPLLKDYATTGTIFGFRKGRVFLAIQEDPHCLPMFIIELPMLTSALQKEMASE 121

Query: 120 IVRIALESETKTHKKKLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAG 179
            VRIALESETKT +KK+LEE+VW +YCNGRKIGYSIRRK++S++E++V+  LRGVSMGAG
Sbjct: 122 TVRIALESETKTSRKKVLEEYVWGIYCNGRKIGYSIRRKNMSEEEMYVIDALRGVSMGAG 181

Query: 180 VLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAA-GPELSIFFVRNH 237
           VLP  N+ +    T+GE+TYMRARF+RV GSKDSEA YMINPEG+  G ELSI+F+R+H
Sbjct: 182 VLPCKNQYDQE--TEGEMTYMRARFDRVIGSKDSEALYMINPEGSGQGTELSIYFLRSH 238

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2165477	238	AT5G42680 "AT5G42680" [Arabido	0.983	0.978	0.644	2.1e-77
TAIR|locus:2122546	264	AT4G39610 "AT4G39610" [Arabido	0.856	0.768	0.450	1.9e-42
TAIR|locus:2052541	252	AT2G21990 "AT2G21990" [Arabido	0.789	0.742	0.484	5.9e-41
TAIR|locus:2169454	261	AT5G06990 "AT5G06990" [Arabido	0.873	0.793	0.416	9.2e-36
TAIR|locus:2178312	277	AT5G23100 "AT5G23100" [Arabido	0.396	0.339	0.494	1.1e-33
TAIR|locus:2102360	267	AT3G25640 "AT3G25640" [Arabido	0.666	0.591	0.452	7.7e-32
TAIR|locus:2062647	297	MIZ1 "AT2G41660" [Arabidopsis	0.675	0.538	0.413	1.2e-28
TAIR|locus:2199577	245	AT1G21050 "AT1G21050" [Arabido	0.654	0.632	0.4	2.8e-27
TAIR|locus:2011766	226	AT1G76610 "AT1G76610" [Arabido	0.624	0.654	0.398	9.4e-27
TAIR|locus:2065609	247	AT2G37880 "AT2G37880" [Arabido	0.708	0.680	0.377	1.8e-25

TAIR|locus:2165477 AT5G42680 "AT5G42680" [Arabidopsis thaliana (taxid:3702)]

 Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
 Identities = 154/239 (64%), Positives = 186/239 (77%)

Query:     3 PIHSSPYYQMDNPAILSLLRHTTTGTGEPKRSKSSST--GGLLKIFKLFPMLTSGCKMVA 60
             PI S+P++ MD+ A+LSLLRHT T        KSS +  GG+LK+FKL PML+SGCKMV 
Sbjct:     2 PIRSNPFFNMDSSALLSLLRHTGTSMDSKSSKKSSGSIGGGVLKMFKLIPMLSSGCKMVN 61

Query:    61 LLGRP-RKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASD 119
             LL R  R+PLLKD ATTGTIFGFRKGRV LAIQEDPHCLP+F+IELPMLT+ALQKEMAS+
Sbjct:    62 LLSRGHRRPLLKDYATTGTIFGFRKGRVFLAIQEDPHCLPIFIIELPMLTSALQKEMASE 121

Query:   120 IVRIAXXXXXXXXXXXXXXXFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAG 179
              VRIA               +VW +YCNGRKIGYSIRRK++S++E++V+  LRGVSMGAG
Sbjct:   122 TVRIALESETKTSRKKVLEEYVWGIYCNGRKIGYSIRRKNMSEEEMYVIDALRGVSMGAG 181

Query:   180 VLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAA-GPELSIFFVRNH 237
             VLP  N+ +    T+GE+TYMRARF+RV GSKDSEA YMINPEG+  G ELSI+F+R+H
Sbjct:   182 VLPCKNQYDQE--TEGEMTYMRARFDRVIGSKDSEALYMINPEGSGQGTELSIYFLRSH 238

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2122546 AT4G39610 "AT4G39610" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 101/224 (45%), Positives = 139/224 (62%)

Query:    28 TGEPKRSKSSSTGGLLKIFKLFPMLTS---GCKMVAL---LGRPRKPLLKDSATTGTIFG 81
             + + K+++++    L  +F+ FP+ T+    CK+  +   LG P  P    S  TGT+FG
Sbjct:    45 SSKKKKNRTNVFRVLRTVFRSFPIFTTPSVACKIPVIHPGLGLP-DPHHNTSRITGTLFG 103

Query:    82 FRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIAXXXXXXXXXXXXXXXF- 140
             +RKGRV L+IQE+P CLP  V+EL M TT LQKE+++ +VRIA                 
Sbjct:   104 YRKGRVSLSIQENPKCLPSLVVELAMQTTTLQKELSTGMVRIALETEKQPRADNNNSKTE 163

Query:   141 ---------VWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASA 191
                      +W +YC G K GY ++R+  ++++L+V++LLR VSMGAGVLP  +E E   
Sbjct:   164 KKTDILEEPLWTMYCKGEKTGYGVKRE-ATEEDLNVMELLRPVSMGAGVLPGNSESEGP- 221

Query:   192 CTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
               DGE+ YMRA FERV GSKDSE FYM++PEG  GPELS FFVR
Sbjct:   222 --DGEMAYMRAYFERVIGSKDSETFYMLSPEGNNGPELSFFFVR 263

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2052541 AT2G21990 "AT2G21990" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 96/198 (48%), Positives = 126/198 (63%)

Query:    45 IFKLFPMLT-SGCKMVALLGR--P--RKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCLP 99
             +F+ FP++T + CK+  L G   P   +     S  TGT+FG+RKGRV L+IQE P CLP
Sbjct:    58 VFRSFPIITPAACKIPVLPGGSLPDQHRSGSSGSRVTGTLFGYRKGRVSLSIQESPRCLP 117

Query:   100 MFVIELPMLTTALQKEMASDIVRIAXXXXXXXXXXXXXXXF--VWAVYCNGRKIGYSIRR 157
               V+EL M T  LQKE++  +VRIA                  +W ++ NG+K GY ++R
Sbjct:   118 SLVVELAMQTMVLQKELSGGMVRIALETEKRGDKEKIKIMDEPLWTMFSNGKKTGYGVKR 177

Query:   158 KHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFY 217
                ++++L+V++LLR VSMGAGVLP   E E     D E+ YMRA FERV GSKDSE FY
Sbjct:   178 D-ATEEDLNVMELLRPVSMGAGVLPGNTEFEGP---DSEMAYMRAYFERVVGSKDSETFY 233

Query:   218 MINPEGAAGPELSIFFVR 235
             M++PEG  GPELSIFFVR
Sbjct:   234 MLSPEGNNGPELSIFFVR 251

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2169454 AT5G06990 "AT5G06990" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 92/221 (41%), Positives = 132/221 (59%)

Query:    28 TGEPKRSKSSSTG---GLLKIFKLFPMLTSGCKM-VALLGRPRKPLLKDSA-TTGTIFGF 82
             +G  K + S ST     +  +F+  P+++  CK  V   GR  +  +      TGT+FG+
Sbjct:    41 SGRNKTTGSKSTKLFRRVRSVFRSLPIMSPMCKFPVGGGGRLHENHVHGGTRVTGTLFGY 100

Query:    83 RKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIAXXXXXXXXXXXXXXXF-V 141
             RK RV LA+QE+P  LP+ ++EL + T  L +++   +VRIA                 +
Sbjct:   101 RKTRVNLAVQENPRSLPILLLELAIPTGKLLQDLGVGLVRIALECEKKPSEKTKIIDEPI 160

Query:   142 WAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPN----EKEASAC---TD 194
             WA+YCNG+K GY ++R+   +D L V+Q+L  VSMGAGVLP  +    E+         +
Sbjct:   161 WALYCNGKKSGYGVKRQPTEED-LVVMQMLHAVSMGAGVLPVSSGAITEQSGGGGGGQQE 219

Query:   195 GELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
             G+LTYMRA FERV GS+DSE +YM+NP+G +GPELSIFFVR
Sbjct:   220 GDLTYMRAHFERVIGSRDSETYYMMNPDGNSGPELSIFFVR 260

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2178312 AT5G23100 "AT5G23100" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 47/95 (49%), Positives = 64/95 (67%)

Query:   141 VWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYM 200
             +W  YCNG+K G++ RR+   + E  V++ L  VSMGAGVLP   E        G++ YM
Sbjct:   183 MWRTYCNGKKCGFATRRE-CGEKEKKVLKALEMVSMGAGVLPETEEIGGGGGGGGDIMYM 241

Query:   201 RARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
             RA+FER+ GS+DSEAFYM+NP+    PELSI+ +R
Sbjct:   242 RAKFERIVGSRDSEAFYMMNPDSNGAPELSIYLLR 276

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2102360 AT3G25640 "AT3G25640" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 76/168 (45%), Positives = 104/168 (61%)

Query:    77 GTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIAXXXXXXXXXXXX 136
             GT+FG R+G V  A+Q+DP  LP  +I+LP  T+ L +EMAS +VRIA            
Sbjct:   100 GTLFGNRRGHVYFAVQDDPTRLPAVLIQLPTPTSVLVREMASGLVRIALETAAYKTDSKK 159

Query:   137 XXX--FVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPN---EKEASA 191
                    W  YCNG+K GY+ R K   + E  V++ +  ++MGAGVLP+     ++E + 
Sbjct:   160 KLLEESTWRTYCNGKKCGYAAR-KECGEAEWKVLKAVGPITMGAGVLPATTTTVDEEGNG 218

Query:   192 CTD---GELTYMRARFERVAGSKDSEAFYMINPE-GAAGPELSIFFVR 235
                   GEL YMRARFERV GS+DSEAFYM+NP+  + GPELS++F+R
Sbjct:   219 AVGSEKGELMYMRARFERVVGSRDSEAFYMMNPDVSSGGPELSVYFLR 266

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062647 MIZ1 "AT2G41660" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 69/167 (41%), Positives = 101/167 (60%)

Query:    76 TGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIAXXXXXXXXXXX 135
             TGT++G ++G V  ++Q +    P+ +++L M T  L KEM+S +VRIA           
Sbjct:   130 TGTLYGHKRGHVTFSVQYNQRSDPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRSGT 189

Query:   136 XXXXFV-WAVYCNGRKIGYSIRRKHL-SDDELHVVQLLRGVSMGAGVLPSPNEKE----A 189
                    W +YCNGRK GY++ R    +D +  V+  +  V++GAGV+P+P   +     
Sbjct:   190 KLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGV 249

Query:   190 SACTD-GELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
              + T+ GEL YMR +FERV GS+DSEAFYM+NP+   GPELSIF +R
Sbjct:   250 GSGTELGELLYMRGKFERVVGSRDSEAFYMMNPDKNGGPELSIFLLR 296

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0032541 "cortical endoplasmic reticulum" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

TAIR|locus:2199577 AT1G21050 "AT1G21050" [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 68/170 (40%), Positives = 104/170 (61%)

Query:    73 SATTGTIFGFRKGRVCLAIQEDP-HCLPMFVIELPMLTTALQKEMASD-IVRIAXXXXXX 130
             S  +GT FG R+GRV   +Q+      P+ ++EL + T AL KEM  + ++RIA      
Sbjct:    85 STVSGTFFGHRRGRVSFCLQDAAVGSSPLLLLELAVPTAALAKEMDEEGVLRIALECDRR 144

Query:   131 XXXXXXXXXF----VWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNE 186
                           VW+++CNGRK+G+++RRK   +D + + ++++ VS+GAGV+PS  E
Sbjct:   145 RSSNSRSSSIFDVPVWSMFCNGRKMGFAVRRKVTENDAVFL-RMMQSVSVGAGVVPSEEE 203

Query:   187 KEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRN 236
              +        + Y+RARFERV GS DSE+F+M+NP G+ G ELSIF +R+
Sbjct:   204 DQ--------MLYLRARFERVTGSSDSESFHMMNPGGSYGQELSIFLLRS 245

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2011766 AT1G76610 "AT1G76610" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 65/163 (39%), Positives = 99/163 (60%)

Query:    76 TGTIFGFRKGRVCLAIQED--PHCLPMFVIELPMLTTALQKEMASDIVRIAXXXXXXXXX 133
             TGT +G R+G V   +Q+D  P   P+ ++EL + T AL +EM    +RIA         
Sbjct:    77 TGTFYGHRRGHVSFCLQDDTRPSSPPLLLLELAVPTAALAREMEEGFLRIALRSKSNRRS 136

Query:   134 XXXXXXFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACT 193
                    VW++YCNGRK G+++RR+  +++++  ++L++ VS+GAGV+P+          
Sbjct:   137 SIFNVP-VWSMYCNGRKFGFAVRRE-TTENDVGFLRLMQSVSVGAGVIPN---------- 184

Query:   194 DGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVRN 236
              GE  Y+RA+FERV GS DSE+F+M+N  G  G ELSIF  R+
Sbjct:   185 -GETLYLRAKFERVTGSSDSESFHMVNQGGGYGQELSIFLSRS 226

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065609 AT2G37880 "AT2G37880" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 66/175 (37%), Positives = 103/175 (58%)

Query:    65 PRKPLLKDSATTGTIFGFRKGRVCLAIQEDPHCL-PMFVIELPMLTTALQKEMASDIVRI 123
             P++P    +   GTIFG RKG V   +Q D   + P+ ++EL + T+ L  EM S +VR+
Sbjct:    73 PQRP--SKTMVIGTIFGRRKGHVWFCVQHDRLSVKPILLLELSIATSQLVHEMGSGLVRV 130

Query:   124 AXX--XXXXXXXXXXXXXFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVL 181
             A                  VW ++CNGRK+G+++RR   +++   +++ L  +++GAGVL
Sbjct:   131 ALECPTRPELKSCLLRSVPVWTMFCNGRKLGFAVRRS-ANEETRMMLKRLESMTVGAGVL 189

Query:   182 PSPNEKEASACTD-GELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
             PS +    S  +D  E+ YMRA +E V GS DSE+F++INP+  +  ELSIF +R
Sbjct:   190 PSGSGLGGSDESDTDEVMYMRANYEHVVGSSDSESFHLINPDANSAQELSIFLLR 244

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0033015201 hypothetical protein (230 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	237
pfam04759	166	pfam04759, DUF617, Protein of unknown function, DU	2e-89
TIGR01570	161	TIGR01570, A_thal_3588, uncharacterized plant-spec	7e-82

>gnl|CDD|218249 pfam04759, DUF617, Protein of unknown function, DUF617

 Score =  260 bits (667), Expect = 2e-89
 Identities = 97/168 (57%), Positives = 121/168 (72%), Gaps = 9/168 (5%)

Query: 74  ATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHK 133
             TGT+FG R+GRV LAIQEDP   P  ++EL + T+AL +EMAS +VRIALE E +   
Sbjct: 1   RVTGTLFGHRRGRVTLAIQEDPRSPPALLLELAVPTSALVREMASGLVRIALECEKRPGS 60

Query: 134 KK------LLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEK 187
                   LLEE VW +YCNGRK+GY++RR+  ++D+L V++LLR VSMGAGVLP     
Sbjct: 61  GGKAAGASLLEEPVWTMYCNGRKVGYAVRRE-ATEDDLRVLELLRPVSMGAGVLPGAGGG 119

Query: 188 EASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
                 DGE+ YMRARFERV GS+DSE+FYMINP+G  GPELSIFF+R
Sbjct: 120 GGGG--DGEVMYMRARFERVVGSRDSESFYMINPDGNGGPELSIFFLR 165

This family represents a conserved region in a number of uncharacterized plant proteins. Length = 166

>gnl|CDD|233472 TIGR01570, A_thal_3588, uncharacterized plant-specific domain TIGR01570

 Score =  241 bits (617), Expect = 7e-82
 Identities = 95/163 (58%), Positives = 117/163 (71%), Gaps = 5/163 (3%)

Query: 75  TTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKK 134
            TGTIFG+RKGRV   IQED   LP+ ++EL M T+ LQKEM+S +VRIALE ET+   K
Sbjct: 1   VTGTIFGYRKGRVNFCIQEDRRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRKQDK 60

Query: 135 --KLLEEFVWAVYCNGRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASAC 192
             KLL E VW +YCNGRK+GY+++R   S++++ V+  L  VS+GAGVLP   E      
Sbjct: 61  DSKLLSEPVWTMYCNGRKVGYAVKRS-ASEEDMTVLTALSKVSVGAGVLPCGKELGGF-- 117

Query: 193 TDGELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSIFFVR 235
            + EL YMRA FERV GSKDSE+FYMINPEG  G ELSIFF+R
Sbjct: 118 DEDELMYMRASFERVVGSKDSESFYMINPEGNIGQELSIFFLR 160

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana. Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
PF04759	166	DUF617: Protein of unknown function, DUF617; Inter	100.0
TIGR01570	161	A_thal_3588 uncharacterized plant-specific domain	100.0

>PF04759 DUF617: Protein of unknown function, DUF617; InterPro: IPR006460 This family of hypothetical plant proteins are defined by a region of about 170 amino acids found at the C terminus

Probab=100.00  E-value=8.3e-96  Score=618.25  Aligned_cols=160  Identities=64%  Similarity=1.068  Sum_probs=150.8

Q ss_pred             ceEEeeecccccceEEEEecCCCCCCeEEEecccchHHHHHHhhcCeeEEEEeeccccccc------cceeeeeEEEEEc
Q 026536           74 ATTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTHKK------KLLEEFVWAVYCN  147 (237)
Q Consensus        74 ~vTGTlFG~RrGrV~~aiQ~dp~~~P~lLLELa~pT~~L~kEM~~GlvRIaLEcek~~~~~------~Ll~ep~WtmyCN  147 (237)
                      ||||||||||||||+||||+||++.|+||||||+||++|+|||++|+|||||||||++.+.      +||+||+|+||||
T Consensus         1 rvtGTlFG~RrGrV~~aiQ~d~~s~P~lllELa~pT~~L~~EM~~GlvRIaLEc~k~~~~~~~~~~~~Ll~ep~W~myCN   80 (166)
T PF04759_consen    1 RVTGTLFGHRRGRVSFAIQEDPRSPPILLLELAMPTSALVREMASGLVRIALECEKRKGKSKGAASGSLLEEPVWTMYCN   80 (166)
T ss_pred             CcEEEEEecccceEEEEEecCCCCCCeEEEEecCcHHHHHHHhhcCeEEEEEEecCCCCCCCcccccccccceeEEEEEC
Confidence            6899999999999999999999999999999999999999999999999999999976432      5999999999999


Q ss_pred             CeeeeeeeeccCCChhHHHHHHHhcceecCceeecCCCccccccCCCCceEeeeeecceeeecCCcceeeeecCCCCCCC
Q 026536          148 GRKIGYSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTDGELTYMRARFERVAGSKDSEAFYMINPEGAAGP  227 (237)
Q Consensus       148 GrK~GYAvRR~~~t~~D~~VL~~l~~VSmGAGVLP~~~~~~~~~~~dgEl~YMRA~FERVVGSkDSEsfyMinPdg~~Gp  227 (237)
                      ||||||||||+ |||+||+||++|++|||||||||+....  .++.|||||||||+|||||||+||||||||||||++||
T Consensus        81 GrK~GyAvRRe-~t~~d~~vL~~l~~VS~GAGVlP~~~~~--~~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~Gp  157 (166)
T PF04759_consen   81 GRKVGYAVRRE-PTDDDLHVLELLRSVSMGAGVLPGGGGG--SGGGDGELMYMRARFERVVGSRDSESFYMINPDGNGGP  157 (166)
T ss_pred             CceeeeeEEcC-CCHHHHHHHHhhheeeecceeccCcccc--CCCCCceEeeeeeeeeeeeccCCcceeEEECCCCCCCc
Confidence            99999999995 9999999999999999999999993222  24789999999999999999999999999999999999


Q ss_pred             ceEEEEEee
Q 026536          228 ELSIFFVRN  236 (237)
Q Consensus       228 ELSIFflR~  236 (237)
                      ||||||+|+
T Consensus       158 ELSIFf~Rv  166 (166)
T PF04759_consen  158 ELSIFFLRV  166 (166)
T ss_pred             eEEEEEEeC
Confidence            999999996

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. At least 12 distinct members are found in Arabidopsis thaliana (Mouse-ear cress).

>TIGR01570 A_thal_3588 uncharacterized plant-specific domain TIGR01570

Probab=100.00  E-value=2.9e-94  Score=606.15  Aligned_cols=158  Identities=60%  Similarity=0.995  Sum_probs=148.7

Q ss_pred             eEEeeecccccceEEEEecCCCCCCeEEEecccchHHHHHHhhcCeeEEEEeeccccc--cccceeeeeEEEEEcCeeee
Q 026536           75 TTGTIFGFRKGRVCLAIQEDPHCLPMFVIELPMLTTALQKEMASDIVRIALESETKTH--KKKLLEEFVWAVYCNGRKIG  152 (237)
Q Consensus        75 vTGTlFG~RrGrV~~aiQ~dp~~~P~lLLELa~pT~~L~kEM~~GlvRIaLEcek~~~--~~~Ll~ep~WtmyCNGrK~G  152 (237)
                      |||||||||||||+||||+||++.|+||||||+||++|+|||++|+|||||||||++.  +.+|++||+|+|||||||||
T Consensus         1 vtGTlfG~RrgrV~~~iQ~dp~~~P~lllELa~pt~~L~~Em~~G~vRIaLEc~k~~~~~~~~ll~ep~W~myCNGrk~G   80 (161)
T TIGR01570         1 VTGTIFGYRKGRVNFCIQEDRRSLPILLLELAMPTSVLQKEMSSGLVRIALECETRKQDKDSKLLSEPVWTMYCNGRKVG   80 (161)
T ss_pred             CeEEEecCCCCcceeeecCCCCCCCeeeeeecCcHHHHHHHhhcCceeEEeeeeccccCCCccceeeeeEEEEECCceee
Confidence            6999999999999999999999999999999999999999999999999999999764  45899999999999999999


Q ss_pred             eeeeccCCChhHHHHHHHhcceecCceeecCCCccccccCCC-CceEeeeeecceeeecCCcceeeeecCCCCCCCceEE
Q 026536          153 YSIRRKHLSDDELHVVQLLRGVSMGAGVLPSPNEKEASACTD-GELTYMRARFERVAGSKDSEAFYMINPEGAAGPELSI  231 (237)
Q Consensus       153 YAvRR~~~t~~D~~VL~~l~~VSmGAGVLP~~~~~~~~~~~d-gEl~YMRA~FERVVGSkDSEsfyMinPdg~~GpELSI  231 (237)
                      |||||+ |||+||+||++|++|||||||||+..+.+   +.| ||||||||+||||||||||||||||||||++||||||
T Consensus        81 yAvRR~-~t~~d~~vL~~l~~VS~GAGVlP~~~~~~---~~~~gel~YMRA~FERVVGS~DSEsfyminPdg~~gpELSI  156 (161)
T TIGR01570        81 YAVKRS-ASEEDMTVLTALSKVSVGAGVLPCGKELG---GFDEDELMYMRASFERVVGSKDSESFYMINPEGNIGQELSI  156 (161)
T ss_pred             EeEecC-CCHHHHHHHHhhheeeecceeccCCCCCC---CCCCceEEEEeeeeeEeccccCceeEEeECCCCCCCceEEE
Confidence            999995 99999999999999999999999653322   334 9999999999999999999999999999999999999


Q ss_pred             EEEee
Q 026536          232 FFVRN  236 (237)
Q Consensus       232 FflR~  236 (237)
                      ||+|+
T Consensus       157 F~lR~  161 (161)
T TIGR01570       157 FFLRS  161 (161)
T ss_pred             EEEeC
Confidence            99996

This model represents a region of about 170 amino acids found at the C-terminus of a family of plant proteins. These proteins typically have additional highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterized protein. At least 12 distinct members are found in Arabidopsis thaliana.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00